Query 013461
Match_columns 442
No_of_seqs 417 out of 2343
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 04:05:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013461.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013461hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1358 Serine palmitoyltransf 100.0 2.3E-81 4.9E-86 577.9 28.2 402 36-438 20-467 (467)
2 PLN02822 serine palmitoyltrans 100.0 3.9E-77 8.4E-82 604.3 49.7 440 1-440 1-481 (481)
3 COG0156 BioF 7-keto-8-aminopel 100.0 7.3E-59 1.6E-63 448.8 35.3 327 94-433 24-387 (388)
4 PLN02955 8-amino-7-oxononanoat 100.0 1.4E-50 3E-55 399.7 35.9 311 107-437 100-462 (476)
5 KOG1359 Glycine C-acetyltransf 100.0 1.6E-48 3.4E-53 347.7 25.1 326 93-436 49-412 (417)
6 KOG1360 5-aminolevulinate synt 100.0 5.5E-45 1.2E-49 337.0 28.0 316 109-437 171-525 (570)
7 PLN02483 serine palmitoyltrans 100.0 8.3E-43 1.8E-47 354.3 38.1 319 107-437 98-467 (489)
8 PLN03227 serine palmitoyltrans 100.0 2E-42 4.2E-47 343.5 35.2 325 112-438 1-384 (392)
9 TIGR01821 5aminolev_synth 5-am 100.0 7.9E-42 1.7E-46 341.9 38.9 318 107-437 43-397 (402)
10 PRK13393 5-aminolevulinate syn 100.0 8.7E-42 1.9E-46 341.9 39.1 329 95-436 25-396 (406)
11 PRK09064 5-aminolevulinate syn 100.0 7E-41 1.5E-45 335.8 37.4 317 108-437 45-398 (407)
12 KOG1357 Serine palmitoyltransf 100.0 1.4E-42 3E-47 326.6 21.3 321 104-436 129-502 (519)
13 PRK13392 5-aminolevulinate syn 100.0 2.3E-39 5E-44 324.9 37.2 317 107-436 44-397 (410)
14 TIGR01822 2am3keto_CoA 2-amino 100.0 4.4E-38 9.6E-43 314.3 39.1 331 92-436 20-389 (393)
15 PRK07179 hypothetical protein; 100.0 1E-36 2.2E-41 305.5 35.9 315 107-436 52-398 (407)
16 TIGR01825 gly_Cac_T_rel pyrido 100.0 5.6E-35 1.2E-39 291.1 38.0 331 92-436 16-381 (385)
17 PRK05958 8-amino-7-oxononanoat 100.0 7.5E-35 1.6E-39 290.1 37.1 332 89-433 19-384 (385)
18 TIGR00858 bioF 8-amino-7-oxono 100.0 1E-34 2.2E-39 286.4 36.2 324 95-431 2-360 (360)
19 PRK06939 2-amino-3-ketobutyrat 100.0 5.7E-34 1.2E-38 285.0 38.7 330 94-437 26-394 (397)
20 PRK05937 8-amino-7-oxononanoat 100.0 4.5E-34 9.7E-39 282.6 34.4 303 109-437 4-351 (370)
21 PRK07505 hypothetical protein; 100.0 3.3E-32 7.2E-37 272.3 36.4 327 92-436 28-399 (402)
22 cd06454 KBL_like KBL_like; thi 100.0 6.3E-31 1.4E-35 258.4 33.4 312 109-433 1-348 (349)
23 COG0160 GabT 4-aminobutyrate a 100.0 7.5E-31 1.6E-35 256.4 32.4 324 91-437 37-446 (447)
24 COG4992 ArgD Ornithine/acetylo 100.0 1.2E-31 2.5E-36 254.6 25.6 314 93-440 25-402 (404)
25 TIGR03246 arg_catab_astC succi 100.0 7.1E-31 1.5E-35 261.8 30.6 312 93-437 18-396 (397)
26 PLN02760 4-aminobutyrate:pyruv 100.0 3E-29 6.6E-34 254.7 30.5 321 92-437 71-492 (504)
27 PRK12381 bifunctional succinyl 100.0 7.3E-29 1.6E-33 248.1 29.8 315 93-439 22-402 (406)
28 COG0001 HemL Glutamate-1-semia 100.0 2.7E-28 5.8E-33 234.1 31.4 324 92-439 35-431 (432)
29 PRK05093 argD bifunctional N-s 100.0 2.9E-28 6.3E-33 243.9 30.5 316 92-437 22-401 (403)
30 PRK04073 rocD ornithine--oxo-a 100.0 2.9E-28 6.4E-33 243.2 30.3 308 93-434 23-395 (396)
31 PRK08117 4-aminobutyrate amino 100.0 3.5E-28 7.6E-33 245.1 30.6 322 94-440 27-433 (433)
32 PRK03715 argD acetylornithine 100.0 1.4E-28 3.1E-33 244.2 27.0 311 93-437 19-394 (395)
33 COG0161 BioA Adenosylmethionin 100.0 2.2E-28 4.7E-33 237.6 26.6 323 93-440 27-447 (449)
34 TIGR01885 Orn_aminotrans ornit 100.0 7.1E-28 1.5E-32 241.0 31.2 311 93-434 20-400 (401)
35 PRK12403 putative aminotransfe 100.0 2.6E-27 5.5E-32 239.2 33.4 325 93-438 37-454 (460)
36 PRK13034 serine hydroxymethylt 100.0 2.1E-28 4.6E-33 244.7 25.1 307 109-435 28-391 (416)
37 PRK03244 argD acetylornithine 100.0 5.6E-28 1.2E-32 241.6 28.1 309 93-437 26-395 (398)
38 PRK08593 4-aminobutyrate amino 100.0 1.6E-27 3.4E-32 240.0 31.2 322 93-439 25-432 (445)
39 PRK02936 argD acetylornithine 100.0 4.8E-28 1E-32 240.5 26.9 305 93-433 12-376 (377)
40 cd00610 OAT_like Acetyl ornith 100.0 1.4E-27 3.1E-32 240.0 29.5 322 92-433 18-412 (413)
41 PRK06082 4-aminobutyrate amino 100.0 2E-27 4.2E-32 239.8 29.6 322 93-441 55-456 (459)
42 PRK01278 argD acetylornithine 100.0 1.7E-27 3.7E-32 237.4 28.3 311 92-436 13-388 (389)
43 PRK11522 putrescine--2-oxoglut 100.0 3.8E-27 8.2E-32 237.3 30.0 315 93-438 64-453 (459)
44 PRK06105 aminotransferase; Pro 100.0 7.3E-27 1.6E-31 235.9 31.5 325 92-438 30-451 (460)
45 PRK06173 adenosylmethionine--8 100.0 5.6E-27 1.2E-31 234.5 29.8 314 94-438 28-427 (429)
46 TIGR03372 putres_am_tran putre 100.0 5.8E-27 1.2E-31 234.4 29.6 309 93-433 58-441 (442)
47 PRK00615 glutamate-1-semialdeh 100.0 1.1E-26 2.3E-31 232.3 31.2 320 92-439 35-431 (433)
48 PRK00854 rocD ornithine--oxo-a 100.0 8.4E-27 1.8E-31 233.4 30.2 310 93-435 24-400 (401)
49 TIGR03576 pyridox_MJ0158 pyrid 100.0 4.8E-27 1E-31 229.0 27.6 281 117-434 27-345 (346)
50 PRK06541 hypothetical protein; 100.0 2.8E-26 6.1E-31 231.4 33.8 326 93-439 35-458 (460)
51 PRK06916 adenosylmethionine--8 100.0 1.8E-26 3.8E-31 233.1 32.2 354 59-437 6-456 (460)
52 PLN02624 ornithine-delta-amino 100.0 2.2E-26 4.8E-31 233.5 32.8 315 93-437 58-445 (474)
53 KOG1404 Alanine-glyoxylate ami 100.0 2.1E-27 4.6E-32 220.9 22.9 332 76-430 17-432 (442)
54 PRK06062 hypothetical protein; 100.0 1.1E-26 2.5E-31 234.0 29.9 321 92-437 35-446 (451)
55 PRK05965 hypothetical protein; 100.0 4.2E-26 9.2E-31 230.3 32.7 327 92-439 28-450 (459)
56 PRK06058 4-aminobutyrate amino 100.0 1.4E-26 2.9E-31 233.6 29.0 322 92-436 38-442 (443)
57 PRK07678 aminotransferase; Val 100.0 5.5E-26 1.2E-30 229.2 33.2 328 93-437 30-450 (451)
58 PRK05964 adenosylmethionine--8 100.0 2.1E-26 4.5E-31 231.5 29.8 318 92-436 24-422 (423)
59 PRK07986 adenosylmethionine--8 100.0 5.4E-27 1.2E-31 234.3 25.2 311 94-436 27-423 (428)
60 PLN02482 glutamate-1-semialdeh 100.0 5E-26 1.1E-30 229.3 31.4 318 92-436 81-473 (474)
61 PRK05639 4-aminobutyrate amino 100.0 7.3E-26 1.6E-30 228.1 31.6 325 92-440 35-447 (457)
62 PRK08360 4-aminobutyrate amino 100.0 9.2E-26 2E-30 226.9 31.9 324 92-437 23-427 (443)
63 PRK13360 omega amino acid--pyr 100.0 4.5E-26 9.8E-31 229.0 29.1 319 93-437 29-441 (442)
64 PTZ00125 ornithine aminotransf 100.0 5.5E-26 1.2E-30 227.5 29.6 317 93-440 14-399 (400)
65 PRK07495 4-aminobutyrate amino 100.0 7.9E-26 1.7E-30 226.4 30.4 323 93-437 23-422 (425)
66 PRK04612 argD acetylornithine 100.0 8.3E-26 1.8E-30 225.0 29.8 320 92-441 22-408 (408)
67 PRK07482 hypothetical protein; 100.0 2.5E-25 5.5E-30 224.8 33.6 327 93-439 33-457 (461)
68 PRK00062 glutamate-1-semialdeh 100.0 1.4E-25 3E-30 225.4 31.5 317 93-437 33-425 (426)
69 PRK06943 adenosylmethionine--8 100.0 8.3E-26 1.8E-30 227.6 29.9 318 93-438 37-448 (453)
70 PRK12389 glutamate-1-semialdeh 100.0 2.3E-25 5E-30 223.7 32.9 320 92-436 35-427 (428)
71 PRK07030 adenosylmethionine--8 100.0 1.5E-25 3.3E-30 226.3 30.9 322 94-438 31-448 (466)
72 PRK08742 adenosylmethionine--8 99.9 3.7E-25 8.1E-30 223.4 33.3 322 94-438 48-469 (472)
73 PRK06918 4-aminobutyrate amino 99.9 6.2E-25 1.3E-29 222.2 34.7 327 93-442 37-449 (451)
74 KOG1402 Ornithine aminotransfe 99.9 1.5E-26 3.2E-31 210.3 20.3 332 63-435 20-426 (427)
75 PRK06917 hypothetical protein; 99.9 1.2E-25 2.6E-30 226.3 29.2 331 94-440 15-441 (447)
76 PRK06149 hypothetical protein; 99.9 9.6E-26 2.1E-30 246.3 30.8 323 92-437 567-971 (972)
77 PRK09221 beta alanine--pyruvat 99.9 1.7E-25 3.6E-30 225.1 30.1 318 93-437 32-444 (445)
78 PRK07036 hypothetical protein; 99.9 3.9E-25 8.5E-30 223.5 32.8 325 92-438 33-454 (466)
79 PRK09264 diaminobutyrate--2-ox 99.9 1.7E-25 3.7E-30 224.6 29.9 321 92-440 21-420 (425)
80 PRK07480 putative aminotransfe 99.9 3.1E-25 6.7E-30 223.7 31.8 324 93-439 33-451 (456)
81 PRK05769 4-aminobutyrate amino 99.9 6.4E-25 1.4E-29 220.8 33.9 320 92-438 36-441 (441)
82 TIGR02407 ectoine_ectB diamino 99.9 1.5E-25 3.3E-30 223.9 29.0 312 92-435 17-411 (412)
83 PRK06777 4-aminobutyrate amino 99.9 4.2E-25 9.1E-30 221.4 32.1 321 93-435 23-420 (421)
84 PLN00144 acetylornithine trans 99.9 8.7E-26 1.9E-30 223.6 26.5 307 96-436 1-380 (382)
85 PRK06938 diaminobutyrate--2-ox 99.9 3.1E-25 6.8E-30 223.9 30.6 323 92-439 45-463 (464)
86 PRK07481 hypothetical protein; 99.9 4E-25 8.6E-30 222.8 30.3 323 92-437 24-446 (449)
87 TIGR00709 dat 2,4-diaminobutyr 99.9 6.8E-25 1.5E-29 221.1 31.5 324 93-439 22-438 (442)
88 PRK07483 hypothetical protein; 99.9 6.7E-25 1.5E-29 220.6 29.7 332 92-439 12-440 (443)
89 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.6E-25 5.7E-30 220.0 26.0 290 126-436 18-368 (370)
90 TIGR00707 argD acetylornithine 99.9 5.5E-25 1.2E-29 218.7 28.1 307 92-433 9-378 (379)
91 PRK04260 acetylornithine amino 99.9 3.8E-25 8.3E-30 219.4 26.7 301 93-433 12-374 (375)
92 PRK02627 acetylornithine amino 99.9 1.4E-24 3E-29 217.2 30.9 312 92-437 21-395 (396)
93 PRK09792 4-aminobutyrate trans 99.9 9.3E-25 2E-29 218.9 29.6 319 93-435 23-420 (421)
94 PRK06148 hypothetical protein; 99.9 7.5E-25 1.6E-29 239.4 31.3 325 91-438 605-1012(1013)
95 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.7E-24 3.8E-29 217.3 31.0 322 92-435 15-419 (420)
96 PRK07046 aminotransferase; Val 99.9 3.5E-24 7.6E-29 215.7 33.0 341 67-438 31-452 (453)
97 TIGR00713 hemL glutamate-1-sem 99.9 1.9E-24 4.1E-29 217.8 31.0 341 69-436 5-422 (423)
98 TIGR00508 bioA adenosylmethion 99.9 8.9E-25 1.9E-29 219.1 27.2 312 93-436 28-426 (427)
99 PLN03226 serine hydroxymethylt 99.9 9E-25 2E-29 220.5 26.5 308 109-436 34-419 (475)
100 PRK06931 diaminobutyrate--2-ox 99.9 5.1E-24 1.1E-28 215.0 31.2 325 92-439 40-457 (459)
101 PRK05630 adenosylmethionine--8 99.9 1.3E-24 2.9E-29 217.1 26.6 315 92-436 22-420 (422)
102 PRK08297 L-lysine aminotransfe 99.9 3.8E-24 8.1E-29 215.2 26.4 311 94-437 28-442 (443)
103 PRK04013 argD acetylornithine/ 99.9 1.4E-23 3E-28 205.3 28.2 303 90-438 4-362 (364)
104 PRK08088 4-aminobutyrate amino 99.9 3.6E-23 7.9E-28 208.1 31.7 325 92-437 23-424 (425)
105 PRK06209 glutamate-1-semialdeh 99.9 6.9E-24 1.5E-28 213.1 25.1 312 92-437 30-406 (431)
106 PRK13580 serine hydroxymethylt 99.9 2.2E-23 4.9E-28 206.8 27.6 310 109-436 49-445 (493)
107 TIGR00699 GABAtrns_euk 4-amino 99.9 9.4E-24 2E-28 211.6 22.3 307 92-434 40-464 (464)
108 COG0436 Aspartate/tyrosine/aro 99.9 1.3E-22 2.8E-27 200.6 27.9 307 109-436 28-391 (393)
109 PF00155 Aminotran_1_2: Aminot 99.9 1.3E-23 2.7E-28 207.7 20.4 298 110-430 2-363 (363)
110 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.9E-22 4.1E-27 200.7 28.3 316 110-437 19-382 (387)
111 TIGR03251 LAT_fam L-lysine 6-t 99.9 9.5E-23 2.1E-27 204.8 23.9 307 96-432 23-430 (431)
112 KOG1401 Acetylornithine aminot 99.9 9E-22 1.9E-26 184.9 24.9 315 92-437 38-431 (433)
113 PLN00175 aminotransferase fami 99.9 3.6E-21 7.9E-26 192.9 28.8 311 108-435 53-412 (413)
114 PRK06108 aspartate aminotransf 99.9 3.9E-21 8.5E-26 191.3 28.0 307 110-435 25-381 (382)
115 cd00378 SHMT Serine-glycine hy 99.9 1.9E-21 4E-26 194.9 22.9 313 109-435 19-384 (402)
116 PRK09082 methionine aminotrans 99.9 1.2E-20 2.5E-25 188.0 26.4 307 108-432 29-385 (386)
117 PLN02974 adenosylmethionine-8- 99.9 1.3E-20 2.7E-25 199.5 27.9 320 92-434 339-816 (817)
118 KOG1403 Predicted alanine-glyo 99.9 6.3E-21 1.4E-25 171.7 21.3 327 90-436 27-437 (452)
119 PRK06207 aspartate aminotransf 99.9 1.3E-19 2.8E-24 181.4 32.1 313 109-437 39-403 (405)
120 PRK05764 aspartate aminotransf 99.9 6E-20 1.3E-24 183.5 29.1 308 108-436 30-391 (393)
121 cd06502 TA_like Low-specificit 99.9 8.3E-21 1.8E-25 185.7 22.3 291 113-432 1-337 (338)
122 PRK07682 hypothetical protein; 99.9 9.1E-20 2E-24 181.2 29.2 307 110-437 21-377 (378)
123 PRK00011 glyA serine hydroxyme 99.9 3.4E-20 7.5E-25 186.6 26.2 314 109-436 25-389 (416)
124 PRK08153 histidinol-phosphate 99.9 1.1E-19 2.3E-24 179.9 28.0 298 107-437 29-366 (369)
125 PRK01533 histidinol-phosphate 99.9 7.1E-20 1.5E-24 180.7 26.6 291 107-438 27-357 (366)
126 PTZ00094 serine hydroxymethylt 99.9 2E-20 4.4E-25 189.5 23.0 308 109-436 34-408 (452)
127 PRK12414 putative aminotransfe 99.9 1.7E-19 3.8E-24 179.4 29.3 306 109-432 29-383 (384)
128 PRK02731 histidinol-phosphate 99.9 8.4E-20 1.8E-24 180.7 26.8 293 107-435 30-365 (367)
129 PRK07324 transaminase; Validat 99.9 1.2E-19 2.6E-24 179.8 27.5 306 106-437 23-371 (373)
130 PRK07681 aspartate aminotransf 99.9 1.5E-19 3.1E-24 180.9 28.1 306 108-433 31-385 (399)
131 PRK03158 histidinol-phosphate 99.9 1.2E-19 2.5E-24 179.2 26.7 290 109-433 29-358 (359)
132 PRK08912 hypothetical protein; 99.9 4.1E-19 8.8E-24 177.1 30.6 310 109-435 26-385 (387)
133 PTZ00377 alanine aminotransfer 99.9 8.6E-19 1.9E-23 179.2 32.5 305 126-441 91-480 (481)
134 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.4E-19 5.3E-24 177.0 27.5 298 126-434 11-360 (361)
135 PRK06290 aspartate aminotransf 99.9 3E-19 6.5E-24 178.7 28.1 310 108-437 43-406 (410)
136 PRK08960 hypothetical protein; 99.9 2.8E-19 6.1E-24 178.2 27.5 304 108-435 31-386 (387)
137 PRK09148 aminotransferase; Val 99.9 6.2E-19 1.3E-23 176.6 30.0 315 107-437 28-391 (405)
138 PRK05957 aspartate aminotransf 99.9 7.1E-19 1.5E-23 175.3 30.3 313 110-439 28-388 (389)
139 PRK06348 aspartate aminotransf 99.9 7E-19 1.5E-23 175.1 29.7 302 110-433 30-382 (384)
140 PRK07366 succinyldiaminopimela 99.9 6.1E-19 1.3E-23 175.8 28.4 306 107-433 28-387 (388)
141 PRK10534 L-threonine aldolase; 99.8 8.2E-20 1.8E-24 178.4 21.5 288 111-434 1-331 (333)
142 PRK10874 cysteine sulfinate de 99.8 5.8E-19 1.3E-23 176.8 28.0 313 109-436 20-398 (401)
143 COG0520 csdA Selenocysteine ly 99.8 6.3E-19 1.4E-23 174.3 27.5 301 124-435 34-404 (405)
144 TIGR03392 FeS_syn_CsdA cystein 99.8 1.1E-18 2.5E-23 174.5 29.8 313 109-436 17-395 (398)
145 PRK07777 aminotransferase; Val 99.8 8.3E-19 1.8E-23 174.8 28.6 308 110-434 25-384 (387)
146 PLN02721 threonine aldolase 99.8 2.1E-19 4.6E-24 176.8 23.7 297 110-435 6-351 (353)
147 PRK06107 aspartate aminotransf 99.8 7.3E-19 1.6E-23 176.0 27.7 317 108-437 32-401 (402)
148 PRK04870 histidinol-phosphate 99.8 9E-19 2E-23 172.6 28.0 294 108-433 25-355 (356)
149 PRK07309 aromatic amino acid a 99.8 2.3E-18 5E-23 171.8 31.1 306 109-437 30-389 (391)
150 COG1167 ARO8 Transcriptional r 99.8 1.1E-18 2.4E-23 176.4 29.0 315 108-438 88-457 (459)
151 PLN00145 tyrosine/nicotianamin 99.8 1.2E-18 2.6E-23 175.4 29.1 313 108-440 51-428 (430)
152 TIGR03540 DapC_direct LL-diami 99.8 1.1E-18 2.4E-23 173.7 28.4 302 108-432 28-382 (383)
153 PRK08068 transaminase; Reviewe 99.8 7E-19 1.5E-23 175.4 26.9 302 108-432 31-385 (389)
154 TIGR01141 hisC histidinol-phos 99.8 6.5E-19 1.4E-23 172.9 25.8 289 108-431 18-346 (346)
155 PRK07683 aminotransferase A; V 99.8 1.4E-18 3.1E-23 173.0 28.2 303 109-436 28-383 (387)
156 TIGR01264 tyr_amTase_E tyrosin 99.8 1.1E-18 2.3E-23 174.8 27.4 310 108-436 30-399 (401)
157 KOG0257 Kynurenine aminotransf 99.8 1.2E-19 2.7E-24 171.6 19.0 306 118-431 39-414 (420)
158 PRK08361 aspartate aminotransf 99.8 9.2E-19 2E-23 174.7 26.5 304 110-436 34-390 (391)
159 PRK05387 histidinol-phosphate 99.8 1.6E-18 3.4E-23 170.7 27.8 296 108-435 23-352 (353)
160 PF00202 Aminotran_3: Aminotra 99.8 6.5E-20 1.4E-24 178.7 16.9 238 95-346 1-316 (339)
161 COG0079 HisC Histidinol-phosph 99.8 3.2E-18 6.9E-23 166.6 28.3 290 110-436 23-354 (356)
162 PRK09295 bifunctional cysteine 99.8 4E-18 8.6E-23 171.0 29.9 312 109-435 24-403 (406)
163 PRK03317 histidinol-phosphate 99.8 2.8E-18 6.1E-23 169.9 28.4 291 110-437 27-365 (368)
164 PRK09276 LL-diaminopimelate am 99.8 2.2E-18 4.7E-23 171.7 27.7 302 108-432 30-384 (385)
165 PRK06225 aspartate aminotransf 99.8 2.6E-18 5.7E-23 170.8 28.1 307 108-437 27-377 (380)
166 PRK08175 aminotransferase; Val 99.8 5.7E-18 1.2E-22 169.2 30.6 309 108-436 28-389 (395)
167 TIGR01979 sufS cysteine desulf 99.8 4.8E-18 1E-22 170.3 30.2 312 110-436 20-401 (403)
168 PLN02187 rooty/superroot1 99.8 3E-18 6.4E-23 173.9 28.3 317 108-440 65-442 (462)
169 PRK15481 transcriptional regul 99.8 1.3E-18 2.8E-23 175.8 25.5 300 109-435 85-430 (431)
170 PRK08636 aspartate aminotransf 99.8 8.9E-18 1.9E-22 168.2 31.3 314 107-436 31-400 (403)
171 TIGR01976 am_tr_V_VC1184 cyste 99.8 2.3E-18 5.1E-23 172.2 27.1 304 110-430 19-397 (397)
172 COG1104 NifS Cysteine sulfinat 99.8 3E-18 6.4E-23 163.8 25.6 304 125-438 14-379 (386)
173 PRK09147 succinyldiaminopimela 99.8 7.9E-18 1.7E-22 168.3 29.8 307 107-434 27-394 (396)
174 PRK05942 aspartate aminotransf 99.8 9.1E-18 2E-22 167.7 30.2 302 108-432 34-388 (394)
175 PRK00950 histidinol-phosphate 99.8 2.8E-18 6.1E-23 169.4 26.1 292 107-434 32-360 (361)
176 PRK08363 alanine aminotransfer 99.8 6.4E-18 1.4E-22 169.1 28.9 314 107-438 28-396 (398)
177 PLN02656 tyrosine transaminase 99.8 5.8E-18 1.2E-22 169.8 28.5 310 107-437 29-404 (409)
178 PRK13355 bifunctional HTH-doma 99.8 3.1E-18 6.7E-23 176.6 27.1 311 107-437 144-515 (517)
179 PRK07550 hypothetical protein; 99.8 5.7E-18 1.2E-22 168.8 28.1 309 108-433 28-384 (386)
180 TIGR03537 DapC succinyldiamino 99.8 3.2E-18 7E-23 168.2 26.0 296 110-432 1-349 (350)
181 PLN03026 histidinol-phosphate 99.8 6E-18 1.3E-22 168.0 27.6 293 107-433 50-379 (380)
182 PTZ00433 tyrosine aminotransfe 99.8 1.3E-17 2.8E-22 167.6 30.0 312 107-437 31-409 (412)
183 PRK07568 aspartate aminotransf 99.8 1.3E-17 2.9E-22 166.8 29.7 309 108-439 29-395 (397)
184 PRK07337 aminotransferase; Val 99.8 1E-17 2.2E-22 167.1 28.4 307 108-434 29-387 (388)
185 TIGR01265 tyr_nico_aTase tyros 99.8 1E-17 2.3E-22 167.7 28.6 310 108-436 30-401 (403)
186 TIGR03812 tyr_de_CO2_Arch tyro 99.8 1.3E-17 2.9E-22 165.4 28.8 294 108-432 22-372 (373)
187 PRK14807 histidinol-phosphate 99.8 2.7E-17 5.9E-22 161.7 30.7 291 111-434 24-350 (351)
188 cd06451 AGAT_like Alanine-glyo 99.8 1.9E-17 4.2E-22 163.1 29.1 267 152-434 30-355 (356)
189 TIGR03538 DapC_gpp succinyldia 99.8 1.7E-17 3.7E-22 165.7 28.9 302 107-433 26-392 (393)
190 COG0112 GlyA Glycine/serine hy 99.8 3.8E-18 8.1E-23 160.5 22.4 308 109-436 26-390 (413)
191 PRK06855 aminotransferase; Val 99.8 1.1E-17 2.4E-22 168.8 27.5 316 108-438 31-431 (433)
192 cd00609 AAT_like Aspartate ami 99.8 2.1E-17 4.5E-22 162.0 28.4 292 112-431 1-349 (350)
193 PRK02948 cysteine desulfurase; 99.8 5.3E-18 1.1E-22 168.7 24.2 301 124-437 12-375 (381)
194 PRK07865 N-succinyldiaminopime 99.8 1.5E-17 3.3E-22 164.4 27.2 295 107-431 25-363 (364)
195 cd06453 SufS_like Cysteine des 99.8 1.5E-17 3.2E-22 165.0 27.3 295 125-430 12-373 (373)
196 PRK13520 L-tyrosine decarboxyl 99.8 2.2E-17 4.8E-22 163.6 28.3 287 124-435 32-370 (371)
197 PLN00143 tyrosine/nicotianamin 99.8 2.2E-17 4.8E-22 165.6 28.3 315 106-440 29-408 (409)
198 PRK09105 putative aminotransfe 99.8 3E-17 6.6E-22 162.3 28.7 288 109-434 43-368 (370)
199 PRK05166 histidinol-phosphate 99.8 3E-17 6.4E-22 162.7 28.4 292 108-434 35-369 (371)
200 PLN02855 Bifunctional selenocy 99.8 2.2E-17 4.7E-22 166.6 27.7 313 110-437 34-419 (424)
201 PRK13238 tnaA tryptophanase/L- 99.8 3.9E-17 8.4E-22 164.8 29.3 319 107-435 34-432 (460)
202 TIGR03539 DapC_actino succinyl 99.8 6E-17 1.3E-21 159.6 29.8 298 107-430 19-356 (357)
203 PRK03321 putative aminotransfe 99.8 2.1E-17 4.6E-22 162.6 26.1 286 110-434 23-349 (352)
204 PRK07392 threonine-phosphate d 99.8 8.3E-17 1.8E-21 158.8 30.3 293 109-434 22-357 (360)
205 PRK02610 histidinol-phosphate 99.8 5.3E-17 1.2E-21 161.0 29.0 295 109-437 28-372 (374)
206 PRK14809 histidinol-phosphate 99.8 6E-17 1.3E-21 159.7 28.5 290 107-435 28-356 (357)
207 PRK09265 aminotransferase AlaT 99.8 5.4E-17 1.2E-21 162.7 28.3 311 107-437 31-402 (404)
208 PRK05664 threonine-phosphate d 99.8 7.2E-17 1.6E-21 157.3 28.1 278 109-436 20-328 (330)
209 cd00613 GDC-P Glycine cleavage 99.8 1.2E-17 2.7E-22 167.1 22.3 303 109-430 20-398 (398)
210 PLN02672 methionine S-methyltr 99.8 1.8E-16 4E-21 170.4 31.0 312 107-435 695-1079(1082)
211 PRK06425 histidinol-phosphate 99.8 9.4E-17 2E-21 156.6 26.3 253 156-434 42-331 (332)
212 TIGR03402 FeS_nifS cysteine de 99.8 1.3E-16 2.8E-21 158.7 27.3 300 125-437 12-373 (379)
213 PRK05839 hypothetical protein; 99.8 1.7E-16 3.6E-21 157.4 27.4 301 108-435 23-373 (374)
214 PRK08056 threonine-phosphate d 99.8 3.5E-16 7.5E-21 154.2 29.5 294 106-434 17-353 (356)
215 cd00617 Tnase_like Tryptophana 99.8 7.5E-17 1.6E-21 160.7 24.6 320 107-436 9-408 (431)
216 TIGR01437 selA_rel uncharacter 99.8 3E-16 6.6E-21 154.6 28.6 294 109-433 8-362 (363)
217 PRK06836 aspartate aminotransf 99.8 4.7E-16 1E-20 155.3 30.3 302 108-437 32-392 (394)
218 PLN02450 1-aminocyclopropane-1 99.8 9.9E-17 2.1E-21 163.0 25.1 271 157-438 89-432 (468)
219 PRK06959 putative threonine-ph 99.8 4E-16 8.8E-21 152.4 28.2 277 109-437 24-334 (339)
220 PRK14808 histidinol-phosphate 99.8 2.5E-16 5.4E-21 153.7 26.4 287 106-433 16-334 (335)
221 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 4.3E-16 9.3E-21 153.4 28.3 265 154-433 31-354 (355)
222 PRK06358 threonine-phosphate d 99.8 1.1E-15 2.4E-20 150.4 30.9 292 108-434 18-353 (354)
223 PLN02231 alanine transaminase 99.8 8.8E-16 1.9E-20 157.7 30.8 304 126-440 143-531 (534)
224 PRK01688 histidinol-phosphate 99.8 1.5E-16 3.3E-21 156.3 23.6 249 157-431 60-351 (351)
225 PRK07590 L,L-diaminopimelate a 99.8 3.3E-16 7.2E-21 157.2 26.2 300 108-433 33-408 (409)
226 PTZ00376 aspartate aminotransf 99.8 2.6E-16 5.6E-21 157.7 25.0 297 108-435 28-402 (404)
227 TIGR01977 am_tr_V_EF2568 cyste 99.8 6.1E-16 1.3E-20 153.6 27.2 298 124-432 12-375 (376)
228 cd00616 AHBA_syn 3-amino-5-hyd 99.8 2.8E-16 6.1E-21 154.5 24.4 269 152-431 16-352 (352)
229 cd00614 CGS_like CGS_like: Cys 99.7 1.2E-16 2.7E-21 157.9 21.4 207 152-365 38-293 (369)
230 TIGR01814 kynureninase kynuren 99.7 9E-16 1.9E-20 153.9 27.8 301 109-434 26-405 (406)
231 PLN02376 1-aminocyclopropane-1 99.7 3E-16 6.4E-21 160.2 24.2 271 156-436 96-438 (496)
232 COG2008 GLY1 Threonine aldolas 99.7 3.2E-16 7E-21 146.8 22.0 292 112-434 2-341 (342)
233 PRK04781 histidinol-phosphate 99.7 1.1E-15 2.5E-20 150.8 26.9 256 156-434 61-361 (364)
234 TIGR02006 IscS cysteine desulf 99.7 1.2E-15 2.6E-20 152.8 27.4 311 110-437 5-378 (402)
235 COG0399 WecE Predicted pyridox 99.7 1.9E-15 4.2E-20 145.8 27.4 282 126-435 15-372 (374)
236 PRK07908 hypothetical protein; 99.7 1.7E-15 3.7E-20 148.9 27.4 291 108-435 21-346 (349)
237 TIGR03542 DAPAT_plant LL-diami 99.7 7.6E-16 1.6E-20 154.2 25.0 301 108-433 32-401 (402)
238 PRK06234 methionine gamma-lyas 99.7 5.9E-16 1.3E-20 154.4 23.8 267 154-436 64-397 (400)
239 PRK04635 histidinol-phosphate 99.7 1.2E-15 2.5E-20 150.3 25.6 249 157-432 63-351 (354)
240 TIGR02326 transamin_PhnW 2-ami 99.7 5.7E-15 1.2E-19 146.0 29.4 265 153-434 34-360 (363)
241 PRK03967 histidinol-phosphate 99.7 4.2E-15 9.2E-20 145.3 27.9 285 107-435 16-333 (337)
242 KOG1368 Threonine aldolase [Am 99.7 7.4E-16 1.6E-20 139.2 20.5 279 125-432 35-364 (384)
243 PF00266 Aminotran_5: Aminotra 99.7 2.6E-15 5.7E-20 148.8 26.2 291 125-426 12-371 (371)
244 TIGR03403 nifS_epsilon cystein 99.7 4.4E-15 9.6E-20 147.8 27.9 300 124-437 11-376 (382)
245 PRK13479 2-aminoethylphosphona 99.7 8.8E-15 1.9E-19 144.9 29.7 269 154-437 37-364 (368)
246 TIGR01140 L_thr_O3P_dcar L-thr 99.7 6.3E-15 1.4E-19 143.7 27.3 278 109-430 17-329 (330)
247 PF01041 DegT_DnrJ_EryC1: DegT 99.7 9.7E-15 2.1E-19 144.1 28.1 280 126-431 5-363 (363)
248 PLN02397 aspartate transaminas 99.7 3.9E-15 8.6E-20 149.8 25.5 295 108-435 47-420 (423)
249 PLN02607 1-aminocyclopropane-1 99.7 7.4E-15 1.6E-19 148.3 27.4 316 109-438 47-439 (447)
250 PRK05968 hypothetical protein; 99.7 2.6E-15 5.5E-20 149.2 23.3 263 153-431 62-385 (389)
251 TIGR03588 PseC UDP-4-keto-6-de 99.7 1.6E-14 3.5E-19 143.6 28.7 288 126-434 10-380 (380)
252 PLN02409 serine--glyoxylate am 99.7 1.5E-14 3.3E-19 144.7 28.4 271 152-437 40-373 (401)
253 PLN02242 methionine gamma-lyas 99.7 4.5E-15 9.7E-20 148.4 24.4 196 152-352 74-302 (418)
254 PRK06767 methionine gamma-lyas 99.7 2.8E-15 6E-20 149.0 22.5 265 154-435 61-384 (386)
255 TIGR01328 met_gam_lyase methio 99.7 4E-15 8.8E-20 147.8 23.0 191 154-349 59-280 (391)
256 PF00464 SHMT: Serine hydroxym 99.7 1.9E-15 4.1E-20 147.3 20.1 302 109-430 20-399 (399)
257 PRK09275 aspartate aminotransf 99.7 8.8E-15 1.9E-19 148.6 25.4 315 109-439 100-520 (527)
258 PLN02271 serine hydroxymethylt 99.7 5.4E-15 1.2E-19 147.8 23.2 306 109-435 148-539 (586)
259 PRK14012 cysteine desulfurase; 99.7 1.1E-14 2.4E-19 146.0 25.8 301 124-437 15-380 (404)
260 PRK09257 aromatic amino acid a 99.7 6.1E-15 1.3E-19 147.5 23.8 289 110-433 27-395 (396)
261 PRK08249 cystathionine gamma-s 99.7 1.3E-14 2.8E-19 144.3 23.6 192 152-349 62-283 (398)
262 PRK08354 putative aminotransfe 99.7 7.4E-14 1.6E-18 135.0 28.1 273 109-433 8-309 (311)
263 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 3.8E-14 8.2E-19 140.6 26.7 289 126-434 11-374 (375)
264 PRK08133 O-succinylhomoserine 99.7 2.3E-14 5E-19 142.5 25.0 190 153-349 60-280 (390)
265 TIGR01324 cysta_beta_ly_B cyst 99.7 1.9E-14 4.1E-19 142.0 24.0 265 153-435 49-375 (377)
266 COG1168 MalY Bifunctional PLP- 99.7 1.3E-13 2.8E-18 129.7 27.8 307 109-436 25-386 (388)
267 PLN02651 cysteine desulfurase 99.7 1.9E-14 4.1E-19 142.3 23.2 287 125-424 12-364 (364)
268 PRK11658 UDP-4-amino-4-deoxy-L 99.7 9.6E-14 2.1E-18 137.8 28.1 290 126-434 14-377 (379)
269 TIGR02379 ECA_wecE TDP-4-keto- 99.6 1.2E-13 2.6E-18 136.6 27.3 289 126-434 11-375 (376)
270 TIGR03801 asp_4_decarbox aspar 99.6 6.7E-14 1.5E-18 142.0 25.8 316 109-440 94-520 (521)
271 cd06450 DOPA_deC_like DOPA dec 99.6 3.8E-14 8.2E-19 139.0 22.4 249 150-432 34-344 (345)
272 PRK09440 avtA valine--pyruvate 99.6 1.4E-13 3E-18 138.6 26.8 313 110-439 31-414 (416)
273 PRK00451 glycine dehydrogenase 99.6 6.8E-14 1.5E-18 142.1 24.0 269 149-434 107-446 (447)
274 PRK08247 cystathionine gamma-s 99.6 6.8E-14 1.5E-18 138.1 23.0 206 153-365 51-288 (366)
275 PRK07503 methionine gamma-lyas 99.6 9.9E-14 2.1E-18 138.5 23.4 192 154-349 65-286 (403)
276 TIGR01325 O_suc_HS_sulf O-succ 99.6 1.2E-13 2.5E-18 137.1 23.4 190 153-349 53-273 (380)
277 PRK06460 hypothetical protein; 99.6 1.4E-13 3E-18 136.2 23.5 191 153-349 44-264 (376)
278 PLN02724 Molybdenum cofactor s 99.6 2.4E-13 5.2E-18 146.7 27.2 317 109-434 35-486 (805)
279 PRK08574 cystathionine gamma-s 99.6 8.9E-14 1.9E-18 137.9 21.7 189 153-349 52-272 (385)
280 PRK07049 methionine gamma-lyas 99.6 2E-13 4.3E-18 137.0 23.9 190 154-349 83-314 (427)
281 KOG0259 Tyrosine aminotransfer 99.6 1E-12 2.2E-17 123.0 26.3 308 109-439 61-436 (447)
282 PRK07810 O-succinylhomoserine 99.6 1.9E-13 4E-18 136.3 23.0 189 154-349 70-290 (403)
283 TIGR03235 DNA_S_dndA cysteine 99.6 1E-13 2.2E-18 136.5 20.2 281 124-424 10-346 (353)
284 PRK04366 glycine dehydrogenase 99.6 4E-13 8.7E-18 137.1 24.8 306 121-440 79-452 (481)
285 PRK07504 O-succinylhomoserine 99.6 2E-13 4.4E-18 136.0 21.6 189 154-349 65-285 (398)
286 PLN02368 alanine transaminase 99.6 2.7E-13 5.8E-18 135.3 22.0 206 157-365 110-396 (407)
287 PRK15407 lipopolysaccharide bi 99.6 3E-12 6.6E-17 128.8 29.2 271 155-435 64-435 (438)
288 PRK07811 cystathionine gamma-s 99.6 5.9E-13 1.3E-17 132.3 23.7 189 154-349 61-281 (388)
289 TIGR01364 serC_1 phosphoserine 99.6 1.4E-12 2.9E-17 127.7 25.8 291 125-435 4-347 (349)
290 PRK08637 hypothetical protein; 99.6 2E-12 4.4E-17 128.9 27.7 245 172-436 72-386 (388)
291 cd00611 PSAT_like Phosphoserin 99.6 4.5E-13 9.8E-18 131.8 22.6 287 124-433 10-353 (355)
292 KOG0634 Aromatic amino acid am 99.6 3.2E-12 6.8E-17 121.7 26.4 280 158-440 104-470 (472)
293 PRK07050 cystathionine beta-ly 99.6 6.1E-13 1.3E-17 132.3 21.9 268 154-438 65-393 (394)
294 PRK08114 cystathionine beta-ly 99.5 1.3E-12 2.8E-17 128.9 23.1 192 153-349 61-283 (395)
295 PLN02509 cystathionine beta-ly 99.5 1.4E-12 2.9E-17 131.3 23.6 189 154-349 133-352 (464)
296 TIGR02618 tyr_phenol_ly tyrosi 99.5 7.1E-12 1.5E-16 123.4 27.4 278 155-436 72-426 (450)
297 PRK06702 O-acetylhomoserine am 99.5 1.7E-12 3.7E-17 129.5 22.3 193 153-349 60-313 (432)
298 PRK09028 cystathionine beta-ly 99.5 3.1E-12 6.6E-17 126.5 23.8 191 154-349 61-280 (394)
299 TIGR01329 cysta_beta_ly_E cyst 99.5 2.6E-12 5.7E-17 127.2 22.7 262 154-436 47-375 (378)
300 PRK08776 cystathionine gamma-s 99.5 5.7E-12 1.2E-16 125.7 25.2 190 153-349 59-280 (405)
301 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 4.1E-12 8.9E-17 125.0 23.5 265 152-435 53-386 (386)
302 COG1103 Archaea-specific pyrid 99.5 1E-11 2.2E-16 111.2 23.4 286 127-436 28-380 (382)
303 PRK08861 cystathionine gamma-s 99.5 4E-12 8.7E-17 125.8 23.4 189 154-349 53-273 (388)
304 PRK07812 O-acetylhomoserine am 99.5 4.3E-12 9.3E-17 127.2 23.9 191 153-349 68-320 (436)
305 PLN02414 glycine dehydrogenase 99.5 2.8E-12 6E-17 138.2 22.6 282 149-438 563-909 (993)
306 PRK05939 hypothetical protein; 99.5 3E-12 6.5E-17 127.3 21.3 193 153-349 46-287 (397)
307 PRK02769 histidine decarboxyla 99.5 1.9E-11 4.2E-16 120.6 26.6 277 128-435 38-371 (380)
308 PRK03080 phosphoserine aminotr 99.5 2.4E-11 5.1E-16 120.7 27.2 293 125-438 24-375 (378)
309 TIGR02080 O_succ_thio_ly O-suc 99.5 9E-12 2E-16 123.4 23.9 189 154-349 51-271 (382)
310 TIGR01788 Glu-decarb-GAD gluta 99.5 2.1E-11 4.5E-16 122.1 26.3 303 124-437 53-430 (431)
311 PRK06084 O-acetylhomoserine am 99.5 3.8E-12 8.3E-17 127.6 20.9 192 154-349 58-311 (425)
312 KOG0256 1-aminocyclopropane-1- 99.5 9.9E-12 2.1E-16 117.4 21.7 271 156-437 123-462 (471)
313 PRK05355 3-phosphoserine/phosp 99.5 3.1E-11 6.7E-16 118.7 26.2 294 124-435 14-357 (360)
314 TIGR00474 selA seryl-tRNA(sec) 99.5 1.5E-11 3.3E-16 123.5 24.3 169 125-296 94-310 (454)
315 PRK13237 tyrosine phenol-lyase 99.5 6.4E-11 1.4E-15 117.0 27.7 276 156-436 80-433 (460)
316 PRK08045 cystathionine gamma-s 99.5 2.2E-11 4.8E-16 120.7 24.6 190 154-349 52-272 (386)
317 PRK05967 cystathionine beta-ly 99.4 2.5E-11 5.4E-16 119.9 23.8 193 152-349 62-283 (395)
318 PRK08248 O-acetylhomoserine am 99.4 9.5E-12 2.1E-16 124.9 21.1 191 153-349 63-316 (431)
319 COG0075 Serine-pyruvate aminot 99.4 8E-11 1.7E-15 113.9 26.5 291 125-437 17-364 (383)
320 PRK15400 lysine decarboxylase 99.4 1.7E-11 3.8E-16 127.3 23.4 271 153-434 194-557 (714)
321 PRK07269 cystathionine gamma-s 99.4 9.2E-12 2E-16 122.5 20.0 202 154-365 54-288 (364)
322 PRK15029 arginine decarboxylas 99.4 2E-11 4.4E-16 128.2 23.2 196 153-348 204-466 (755)
323 PRK08064 cystathionine beta-ly 99.4 3.5E-11 7.5E-16 119.8 23.9 262 153-433 53-383 (390)
324 PRK07671 cystathionine beta-ly 99.4 2.2E-11 4.8E-16 120.5 22.2 190 153-349 49-269 (377)
325 PRK04311 selenocysteine syntha 99.4 6E-11 1.3E-15 119.5 25.0 286 125-434 99-462 (464)
326 PRK08134 O-acetylhomoserine am 99.4 2.7E-11 5.9E-16 121.6 22.5 192 153-349 63-316 (433)
327 PLN03032 serine decarboxylase; 99.4 8.4E-11 1.8E-15 115.3 25.2 278 125-432 36-372 (374)
328 PRK07582 cystathionine gamma-l 99.4 3.4E-11 7.5E-16 118.8 22.7 254 154-431 51-364 (366)
329 PRK05994 O-acetylhomoserine am 99.4 2.8E-11 6.1E-16 121.7 22.4 193 154-349 63-315 (427)
330 cd00615 Orn_deC_like Ornithine 99.4 2.3E-12 5E-17 123.5 13.7 192 153-344 58-293 (294)
331 TIGR01326 OAH_OAS_sulfhy OAH/O 99.4 5.3E-11 1.2E-15 119.5 23.3 82 154-235 57-142 (418)
332 PRK05613 O-acetylhomoserine am 99.4 4.8E-11 1E-15 119.8 22.8 191 153-349 68-325 (437)
333 COG0626 MetC Cystathionine bet 99.4 7.9E-11 1.7E-15 114.7 22.9 209 153-366 62-319 (396)
334 KOG1549 Cysteine desulfurase N 99.4 4.7E-11 1E-15 115.1 21.0 315 110-437 45-419 (428)
335 PRK06434 cystathionine gamma-l 99.4 4.8E-11 1E-15 117.8 21.2 205 153-365 63-308 (384)
336 PRK06176 cystathionine gamma-s 99.4 8.5E-11 1.8E-15 116.4 22.9 188 154-348 50-268 (380)
337 PF01276 OKR_DC_1: Orn/Lys/Arg 99.3 8.6E-12 1.9E-16 122.4 13.1 199 153-353 65-327 (417)
338 PRK15399 lysine decarboxylase 99.3 2.5E-10 5.4E-15 118.8 23.9 271 153-434 194-557 (713)
339 KOG0633 Histidinol phosphate a 99.3 8.4E-11 1.8E-15 104.8 16.2 258 158-433 73-374 (375)
340 PRK12566 glycine dehydrogenase 99.3 2.8E-10 6E-15 120.8 22.8 278 149-437 538-877 (954)
341 PRK13578 ornithine decarboxyla 99.3 4.8E-10 1E-14 116.8 23.9 273 153-435 173-564 (720)
342 TIGR01366 serC_3 phosphoserine 99.3 3.7E-10 8E-15 111.3 21.6 293 125-436 15-360 (361)
343 PLN02880 tyrosine decarboxylas 99.3 3.3E-09 7.1E-14 108.2 28.1 280 152-440 120-488 (490)
344 PLN02452 phosphoserine transam 99.3 4.4E-09 9.6E-14 103.1 27.1 304 110-436 7-363 (365)
345 TIGR02617 tnaA_trp_ase tryptop 99.2 3.3E-09 7.1E-14 103.8 23.2 311 110-436 42-441 (467)
346 TIGR03531 selenium_SpcS O-phos 99.2 3.7E-09 8E-14 105.6 23.3 270 153-433 104-443 (444)
347 PLN02590 probable tyrosine dec 99.2 2.7E-08 5.9E-13 101.9 29.9 278 152-438 168-534 (539)
348 PLN02414 glycine dehydrogenase 99.2 3.6E-09 7.8E-14 114.5 23.8 292 111-432 104-465 (993)
349 PF01212 Beta_elim_lyase: Beta 99.2 5.2E-11 1.1E-15 112.9 8.6 222 113-352 1-275 (290)
350 PRK05367 glycine dehydrogenase 99.2 2.7E-09 5.8E-14 115.9 22.7 279 149-439 537-878 (954)
351 TIGR03799 NOD_PanD_pyr putativ 99.1 4.5E-08 9.7E-13 100.3 28.0 256 172-428 162-517 (522)
352 COG2873 MET17 O-acetylhomoseri 99.1 2.3E-08 4.9E-13 94.2 21.8 130 153-285 61-222 (426)
353 KOG2467 Glycine/serine hydroxy 99.1 1.5E-08 3.3E-13 94.8 20.1 305 110-435 41-425 (477)
354 TIGR00461 gcvP glycine dehydro 99.1 1.9E-08 4.2E-13 107.6 23.6 278 149-438 525-869 (939)
355 COG1982 LdcC Arginine/lysine/o 99.1 1.7E-08 3.7E-13 101.3 20.8 200 155-354 71-320 (557)
356 PLN02263 serine decarboxylase 99.0 3E-07 6.4E-12 92.1 27.4 255 152-436 131-443 (470)
357 TIGR01365 serC_2 phosphoserine 99.0 3.8E-07 8.1E-12 89.7 27.2 269 153-434 38-371 (374)
358 KOG0053 Cystathionine beta-lya 99.0 6.7E-08 1.5E-12 93.4 20.1 164 154-322 77-273 (409)
359 KOG1405 4-aminobutyrate aminot 98.9 2.7E-08 6E-13 92.6 13.8 310 96-436 62-483 (484)
360 PRK12462 phosphoserine aminotr 98.9 1.5E-06 3.2E-11 84.7 26.0 290 125-435 16-361 (364)
361 PRK05367 glycine dehydrogenase 98.8 1.5E-07 3.3E-12 102.4 18.6 254 148-431 115-437 (954)
362 KOG2862 Alanine-glyoxylate ami 98.8 2.5E-06 5.4E-11 78.6 22.4 268 154-436 50-382 (385)
363 COG3977 Alanine-alpha-ketoisov 98.8 2.5E-06 5.3E-11 78.2 21.9 311 111-440 32-415 (417)
364 cd01494 AAT_I Aspartate aminot 98.7 8.2E-08 1.8E-12 83.4 10.0 68 156-223 2-72 (170)
365 COG3844 Kynureninase [Amino ac 98.7 4E-06 8.7E-11 77.8 19.2 295 120-437 40-403 (407)
366 COG1448 TyrB Aspartate/tyrosin 98.7 2.9E-06 6.3E-11 80.7 18.7 230 172-433 97-395 (396)
367 COG0076 GadB Glutamate decarbo 98.7 3.1E-06 6.7E-11 85.4 20.3 239 125-366 75-381 (460)
368 COG1921 SelA Selenocysteine sy 98.6 8.3E-07 1.8E-11 85.6 15.0 198 124-324 39-271 (395)
369 TIGR00461 gcvP glycine dehydro 98.5 8.5E-06 1.8E-10 87.8 20.8 288 113-431 67-426 (939)
370 PF12897 Aminotran_MocR: Alani 98.5 9.2E-05 2E-09 70.9 24.9 267 151-436 66-415 (425)
371 PF02347 GDC-P: Glycine cleava 98.5 5.4E-06 1.2E-10 81.9 16.5 253 148-430 104-429 (429)
372 PF00282 Pyridoxal_deC: Pyrido 98.5 2E-05 4.4E-10 77.8 20.4 210 153-364 78-372 (373)
373 PF06838 Met_gamma_lyase: Meth 98.4 3.7E-05 8.1E-10 73.1 19.6 144 150-295 49-246 (403)
374 COG1003 GcvP Glycine cleavage 98.3 5.1E-05 1.1E-09 73.3 17.8 283 149-438 104-449 (496)
375 KOG1383 Glutamate decarboxylas 98.3 0.00015 3.2E-09 70.8 20.6 296 125-440 93-450 (491)
376 PF03841 SelA: L-seryl-tRNA se 98.3 6.2E-07 1.3E-11 85.7 4.1 191 125-323 19-260 (367)
377 KOG0258 Alanine aminotransfera 98.3 0.00015 3.3E-09 69.1 19.5 296 126-440 89-473 (475)
378 COG3033 TnaA Tryptophanase [Am 98.3 0.00042 9.1E-09 65.5 22.0 314 108-435 45-443 (471)
379 COG0403 GcvP Glycine cleavage 98.2 0.0002 4.4E-09 69.3 19.4 299 110-433 75-447 (450)
380 TIGR03811 tyr_de_CO2_Ent tyros 98.2 0.002 4.3E-08 67.3 28.1 216 148-366 117-503 (608)
381 PRK12566 glycine dehydrogenase 97.8 0.001 2.2E-08 71.8 18.4 251 148-431 118-439 (954)
382 PF04864 Alliinase_C: Allinase 97.8 0.0016 3.5E-08 61.7 16.6 253 155-433 44-362 (363)
383 COG1932 SerC Phosphoserine ami 97.7 0.024 5.1E-07 54.3 23.0 158 261-436 186-363 (365)
384 PF05889 SLA_LP_auto_ag: Solub 97.6 0.015 3.2E-07 56.6 20.4 263 160-435 62-389 (389)
385 COG4100 Cystathionine beta-lya 97.5 0.0038 8.2E-08 57.8 13.6 50 149-198 59-112 (416)
386 KOG3846 L-kynurenine hydrolase 97.4 0.12 2.6E-06 48.3 24.2 306 107-438 64-463 (465)
387 KOG2040 Glycine dehydrogenase 97.0 0.025 5.4E-07 57.7 15.5 272 151-436 579-918 (1001)
388 PLN02994 1-aminocyclopropane-1 96.9 0.0034 7.4E-08 53.6 7.4 54 151-204 93-152 (153)
389 KOG1412 Aspartate aminotransfe 96.6 0.072 1.6E-06 49.8 14.0 146 267-439 245-408 (410)
390 KOG1411 Aspartate aminotransfe 94.5 0.38 8.3E-06 45.8 10.3 49 176-224 127-177 (427)
391 KOG2040 Glycine dehydrogenase 94.0 1.9 4E-05 44.7 14.4 84 327-431 395-478 (1001)
392 KOG3843 Predicted serine hydro 87.5 15 0.00032 34.0 12.2 31 410-440 376-406 (432)
393 KOG0628 Aromatic-L-amino-acid/ 84.1 50 0.0011 33.3 24.5 93 334-439 381-474 (511)
394 KOG2790 Phosphoserine aminotra 72.9 34 0.00074 32.2 9.4 154 264-435 194-367 (370)
395 PF10678 DUF2492: Protein of u 53.8 26 0.00056 26.0 4.1 47 156-202 22-69 (78)
396 TIGR03853 matur_matur probable 49.6 33 0.00072 25.3 4.0 47 156-202 20-67 (77)
397 PRK09458 pspB phage shock prot 47.1 52 0.0011 24.2 4.7 31 43-73 14-45 (75)
398 KOG0629 Glutamate decarboxylas 46.7 1.1E+02 0.0023 30.7 8.2 78 161-238 148-250 (510)
399 PF06667 PspB: Phage shock pro 46.4 26 0.00056 25.9 3.1 31 44-74 15-46 (75)
400 PLN02356 phosphateglycerate ki 40.0 4.1E+02 0.0089 26.8 13.3 50 172-221 106-157 (423)
401 PRK02289 4-oxalocrotonate taut 37.0 97 0.0021 21.4 4.8 31 410-440 4-34 (60)
402 PRK00745 4-oxalocrotonate taut 34.0 1.1E+02 0.0024 21.0 4.8 31 409-439 3-33 (62)
403 PRK01964 4-oxalocrotonate taut 33.4 1.2E+02 0.0026 21.1 4.9 31 409-439 3-33 (64)
404 TIGR02035 D_Ser_am_lyase D-ser 33.0 2E+02 0.0043 29.2 8.1 66 158-223 141-207 (431)
405 cd00491 4Oxalocrotonate_Tautom 31.6 1.4E+02 0.003 20.1 4.9 30 410-439 3-32 (58)
406 cd06447 D-Ser-dehyd D-Serine d 30.8 2.5E+02 0.0055 28.1 8.4 61 162-222 127-188 (404)
407 TIGR02867 spore_II_P stage II 29.5 4.1E+02 0.0088 23.7 14.2 33 406-438 162-195 (196)
408 TIGR00013 taut 4-oxalocrotonat 28.0 1.7E+02 0.0036 20.1 4.9 30 410-439 3-33 (63)
409 COG0742 N6-adenine-specific me 27.9 2.1E+02 0.0045 25.3 6.3 83 106-207 42-129 (187)
410 KOG2107 Uncharacterized conser 27.4 90 0.002 26.7 3.8 97 126-224 47-161 (179)
411 PRK02220 4-oxalocrotonate taut 26.9 1.7E+02 0.0038 19.9 4.8 30 410-439 4-33 (61)
412 PF01361 Tautomerase: Tautomer 26.2 1.8E+02 0.004 19.7 4.8 31 410-440 3-33 (60)
413 TIGR02976 phageshock_pspB phag 25.9 1.1E+02 0.0024 22.6 3.6 30 44-73 15-45 (75)
414 PF02009 Rifin_STEVOR: Rifin/s 24.4 28 0.00062 33.2 0.4 23 39-61 265-287 (299)
415 COG4273 Uncharacterized conser 23.3 1.8E+02 0.004 23.7 4.6 56 380-441 79-134 (135)
416 TIGR01747 diampropi_NH3ly diam 23.3 5.7E+02 0.012 25.3 9.3 61 162-222 87-148 (376)
417 PRK08246 threonine dehydratase 23.2 6.6E+02 0.014 24.0 9.8 55 169-223 68-123 (310)
418 PRK08329 threonine synthase; V 22.9 4.3E+02 0.0093 25.7 8.3 56 168-223 103-159 (347)
419 PRK06450 threonine synthase; V 22.7 5E+02 0.011 25.2 8.7 63 168-231 96-159 (338)
420 PF02639 DUF188: Uncharacteriz 22.5 90 0.0019 25.8 2.9 61 171-234 30-92 (130)
421 TIGR01477 RIFIN variant surfac 22.3 44 0.00096 32.5 1.2 21 41-61 321-341 (353)
422 PTZ00046 rifin; Provisional 22.2 45 0.00097 32.5 1.2 21 41-61 326-346 (358)
423 PHA02689 ORF051 putative membr 22.0 80 0.0017 25.6 2.4 24 32-55 28-51 (128)
424 PRK11761 cysM cysteine synthas 21.6 5.7E+02 0.012 24.2 8.7 59 171-229 65-125 (296)
425 PF08624 CRC_subunit: Chromati 21.5 47 0.001 27.7 1.0 71 37-113 49-126 (139)
426 PLN00415 3-ketoacyl-CoA syntha 20.4 54 0.0012 33.4 1.4 73 107-190 365-441 (466)
427 PRK02991 D-serine dehydratase; 20.3 4.5E+02 0.0097 26.7 8.0 59 165-223 153-212 (441)
428 PF15361 RIC3: Resistance to i 20.2 1.4E+02 0.0031 25.3 3.8 13 63-75 127-139 (152)
No 1
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-81 Score=577.92 Aligned_cols=402 Identities=54% Similarity=0.906 Sum_probs=377.2
Q ss_pred hHHHHHHHHHHHHHHHHhcCcCCCCCCCCCHHHHHHHHhhhcCCCCCccccccc-ccCCCeeecCCCCeEEECCeeEEEe
Q 013461 36 GHLFVEVLLLVVILFLLSQKSYKPPKRPLTKKEIDELCDEWVPESLIPPIIEEM-RCEPPVLESAAGPHTIISGKEVVNF 114 (442)
Q Consensus 36 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~G~~~id~ 114 (442)
+|+++|++|+++++|++++|+|+.+..+||++|+|+|++||+||||||+.++.. -.++|++++..+.++++||++++||
T Consensus 20 ~~~~iE~lLi~~~i~~~~rk~~~~~~~~lt~~eideLiedw~PEPLV~~~~~~~~~~~~~v~e~~~~~~~~i~G~~~~N~ 99 (467)
T KOG1358|consen 20 LHTIIETLLIVLVIILLLRKSYKIPVRPLTEQEIDELIEDWEPEPLVPPVPEDHPVLNTPVLESVMLPHVTIDGKDVLNF 99 (467)
T ss_pred HHHHHHHHHHHHhhheeeeccCCCcccCCCHHHHHHHHhcCCCCCCCCCCcccccccCCcccccccCCceEecCceeecc
Confidence 799999999999999999999999988999999999999999999999998764 4568999999999999999999999
Q ss_pred ecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCC
Q 013461 115 ASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGD 194 (442)
Q Consensus 115 ~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd 194 (442)
+|+|||++..++++++.+...+++||+|+||||+||||.|+|.++|++||+|+|+|++++|+.|++++.++|+||+++||
T Consensus 100 aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGD 179 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGD 179 (467)
T ss_pred cchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcccc---------cc------------------------
Q 013461 195 LIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADN---------KR------------------------ 241 (442)
Q Consensus 195 ~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~---------~~------------------------ 241 (442)
+|++|+.+++++++|++++++++.+|+||||++||+++.+.+... .+
T Consensus 180 Ii~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk 259 (467)
T KOG1358|consen 180 IIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLK 259 (467)
T ss_pred EEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHH
Confidence 999999999999999999999999999999999999887655111 00
Q ss_pred -----------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCCCcHH
Q 013461 242 -----------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPY 310 (442)
Q Consensus 242 -----------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~ 310 (442)
+.+||++|++|+|+++|+|++++++|++++||+.++++.||||+|+..+++|+|.++.+|+||+++||+
T Consensus 260 ~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~ 339 (467)
T KOG1358|consen 260 NKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFIADHQRLSGSGYCFSASLPPY 339 (467)
T ss_pred hhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccCceeecceeeEeeeeccccceeeeccCchh
Confidence 889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 013461 311 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDG 390 (442)
Q Consensus 311 ~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~G 390 (442)
.+.+|..+++++++++++.+.+++....+++.|+...++.+.+.+.||++++.+..+.++.+.+..++++++++|+.+ |
T Consensus 340 la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~ 418 (467)
T KOG1358|consen 340 LAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-G 418 (467)
T ss_pred hhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-c
Confidence 999999999999988889999999999999999887789999999999999999988888888888999999999988 9
Q ss_pred EEEeeccCc-ccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 391 VFVVTSKRS-MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 391 V~v~~~~~~-~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
++++...+. ..++++.||+|||++++.+++||++++++.|+++...++
T Consensus 419 ~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~~ 467 (467)
T KOG1358|consen 419 VLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAVL 467 (467)
T ss_pred ceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhhC
Confidence 999988773 456777789999999999999999999999999877653
No 2
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=3.9e-77 Score=604.27 Aligned_cols=440 Identities=81% Similarity=1.253 Sum_probs=398.0
Q ss_pred ChhhHHHHHHhHHHHHHHHhcCCCCcceEEeEeehhHHHHHHHHHHHHHHHHhcCcCCCCCCCCCHHHHHHHHhhhcCCC
Q 013461 1 MASFILNFVNTMLNRVKLALDSPSAGAVVFGVHISGHLFVEVLLLVVILFLLSQKSYKPPKRPLTKKEIDELCDEWVPES 80 (442)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~ 80 (442)
|++++.++++..++||..+++.|.++|||||.+..+|+++|++|++|++|++++++|++++.+||++|+|+||+||+|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (481)
T PLN02822 1 MALNVLNLVNAALERVTMLLEAPLARAVVFGVHIGGHLVVEGLLIVVIVFLLSQKSYKPPKRPLTEKEIDELCDEWTPEP 80 (481)
T ss_pred CchhHHHHHHHHHHHHHHHhcccccceeEeecCCCchhHHHHHHHHHHHHHHHcCcCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999998877999999999999999999
Q ss_pred CCcccccccccCCCeeecCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHH
Q 013461 81 LIPPIIEEMRCEPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCE 160 (442)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le 160 (442)
|+|+.++......|++++++|++++++|+++|||+|++|+|+.+||++++++++++++||.++|+||++||+.+.|.+||
T Consensus 81 l~~~~~~~~~~~~~~~~~~~G~~i~~~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Le 160 (481)
T PLN02822 81 LIPPITEEMRPEPPVLESAAGPHTIINGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCE 160 (481)
T ss_pred CCCCCchhccccCCceecCCCCeEEECCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHH
Confidence 99998876555678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhccc--
Q 013461 161 ARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTAD-- 238 (442)
Q Consensus 161 ~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~-- 238 (442)
++||+++|.++++++++|+.++.++++++++|||+|++|+.+|.+++.++.++++++++++|||+++++..+++....
T Consensus 161 e~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~ 240 (481)
T PLN02822 161 TKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENK 240 (481)
T ss_pred HHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988764321
Q ss_pred ----ccc-----------------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccC
Q 013461 239 ----NKR-----------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT 279 (442)
Q Consensus 239 ----~~~-----------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~ 279 (442)
.++ +|++|++|++|+|+++++++.++++||+++||||++|+
T Consensus 241 ~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~ 320 (481)
T PLN02822 241 RKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALAT 320 (481)
T ss_pred ccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhh
Confidence 111 89999999999999999999767889999999999999
Q ss_pred CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCE
Q 013461 280 EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPI 359 (442)
Q Consensus 280 ~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i 359 (442)
.||||+|+++++++++....+++|++++||+.+++++++|+.+++.+++++++++++++|++.|++.+|+++..++.+|+
T Consensus 321 ~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi 400 (481)
T PLN02822 321 EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPI 400 (481)
T ss_pred CCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCE
Confidence 99999999999999998888999999999999999999999887767899999999999999999877888876678999
Q ss_pred EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 360 VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+++.+++..+....+....+++++++++++||++.++.++..+....++.+|++++..+|++||++++++|++++.++++
T Consensus 401 ~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 401 VFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred EEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999543121112334567899988867799999987766554444567999999999999999999999999998875
Q ss_pred c
Q 013461 440 D 440 (442)
Q Consensus 440 ~ 440 (442)
+
T Consensus 481 ~ 481 (481)
T PLN02822 481 K 481 (481)
T ss_pred C
Confidence 3
No 3
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=7.3e-59 Score=448.78 Aligned_cols=327 Identities=36% Similarity=0.641 Sum_probs=298.3
Q ss_pred CeeecCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEE
Q 013461 94 PVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSI 173 (442)
Q Consensus 94 ~~~~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i 173 (442)
+.+.+..+..++.+|++++||+||||||++.||++++++.+++++||.+++++|.++|+.+.|.+||++||+|+|.|.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al 103 (388)
T COG0156 24 RALDRRQGLAIRADGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAAL 103 (388)
T ss_pred hhccccCCcceecCCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEE
Confidence 34444556777788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcccc--cc----------
Q 013461 174 LYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADN--KR---------- 241 (442)
Q Consensus 174 ~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~--~~---------- 241 (442)
+|+||+.||.+++.++++++|.|+.|+.+|.|+++|+++++++++.|+|||+++||+.|++..... ++
T Consensus 104 ~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSM 183 (388)
T COG0156 104 LFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSM 183 (388)
T ss_pred EEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccC
Confidence 999999999999999999999999999999999999999999999999999999999998842111 11
Q ss_pred -------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHh
Q 013461 242 -------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRL 296 (442)
Q Consensus 242 -------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~ 296 (442)
+|++|++|++|+|+++++|+.+.++||+++||||+||+.|||++|+..++|++++
T Consensus 184 dGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~L~~ 263 (388)
T COG0156 184 DGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYLRN 263 (388)
T ss_pred CCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHHHHH
Confidence 9999999999999999999998999999999999999999999999999999999
Q ss_pred hCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHH
Q 013461 297 SSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 297 ~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 376 (442)
.+++|+||+++||..++++.++++++++.++++++++++..++++.++.. ++.+. +..+||+++.+++ ..
T Consensus 264 ~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~-~s~s~I~pv~~gd--------~~ 333 (388)
T COG0156 264 RARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL-GLVLL-PSESPIIPVILGD--------EE 333 (388)
T ss_pred hCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCccC-CCCCCeeeeEeCC--------HH
Confidence 99999999999999999999999999998999999999999999777664 77664 4689999999853 34
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.+.++...++++ ||++.+..+|+++++. ++||+++++.||++||+++++++.++
T Consensus 334 ~a~~~s~~l~~~-Gi~v~~i~~PTVp~gt--arlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 334 RALEASRALLEE-GIYVSAIRPPTVPKGT--ARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHHC-CeeEeeecCCCCCCCc--ceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 467788877766 9999999999987653 77999999999999999999999864
No 4
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=1.4e-50 Score=399.68 Aligned_cols=311 Identities=22% Similarity=0.329 Sum_probs=277.6
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhh
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai 186 (442)
.++++|||+||||||+..||++++++.+++++||.++|++|.++|+.+.|.+||++||+|+|.|.+++|++|+.||.+++
T Consensus 100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i 179 (476)
T PLN02955 100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAM 179 (476)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh--------------ccCCCEEEeCCCchHHHHHHHHhc----CCeEEEecCCCHHHHHHHHHhhcccccc-------
Q 013461 187 PCF--------------CKKGDLIVADEGVHWGIQNGLYLS----RSTVVYFKHNDMDSLRNTLERVTADNKR------- 241 (442)
Q Consensus 187 ~a~--------------~~~gd~Vi~~~~~h~s~~~~~~l~----g~~v~~~~~~d~~~Le~~l~~~~~~~~~------- 241 (442)
+++ .+++|.|+.|..+|.+++.|++++ +++++.|+|||+++|+++|+......+.
T Consensus 180 ~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~ 259 (476)
T PLN02955 180 VAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLF 259 (476)
T ss_pred HHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCC
Confidence 887 367889999999999999999998 5889999999999999999875442211
Q ss_pred ---------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHH
Q 013461 242 ---------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQ 294 (442)
Q Consensus 242 ---------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l 294 (442)
+|++|++|++|+|.++++|+. +++||+++||||++|+.|||+++++++++++
T Consensus 260 SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~GGfi~gs~~~~~~l 338 (476)
T PLN02955 260 SMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHGGFIACSKKWKQLI 338 (476)
T ss_pred CCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccCceeecHHHHHHHH
Confidence 999999999999999999997 6899999999999999999999999999999
Q ss_pred HhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 295 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 295 ~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
+..+.+++||+++||..+++++++++.+...+.++++++++.++|++.+ |+.+ .+||+.+.+++
T Consensus 339 ~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~-------- 402 (476)
T PLN02955 339 QSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN-------- 402 (476)
T ss_pred HHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC--------
Confidence 9999999999999999999999999998877788999999999999842 5543 48999999843
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.....++.++++ ++||++.+..+|+++... .++||++++.||++||++++++|.++....
T Consensus 403 ~~~a~~~~~~L~-~~Gi~v~~i~yPtVP~g~--~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 403 QEKALKASRYLL-KSGFHVMAIRPPTVPPNS--CRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHHHHH-HCCCEEEEECCCCCCCCC--ceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 234556787654 569999999999985542 569999999999999999999999886544
No 5
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-48 Score=347.66 Aligned_cols=326 Identities=32% Similarity=0.519 Sum_probs=290.2
Q ss_pred CCeeecCCCCeEEECC--eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC
Q 013461 93 PPVLESAAGPHTIISG--KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP 170 (442)
Q Consensus 93 ~~~~~~~~g~~~~~~G--~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e 170 (442)
..++++.+|+.+.++| +++|||+.|||||+..||+|+++..+++++||.|..+.|+.+|+++.|..||++||+|.+.|
T Consensus 49 erVi~s~q~p~i~v~G~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rE 128 (417)
T KOG1359|consen 49 ERVITSRQGPTIQVKGSDKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRE 128 (417)
T ss_pred eeEEeecccceEEEeccccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCC
Confidence 5789999999999877 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcccccc---------
Q 013461 171 DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKR--------- 241 (442)
Q Consensus 171 ~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~~~--------- 241 (442)
++|+|.+++.||..++-++..|.|-|+.|+..|.++.+|+++.. .+.|-|+.+++..+....+...+
T Consensus 129 D~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FS 204 (417)
T KOG1359|consen 129 DTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFS 204 (417)
T ss_pred ceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhccchhHHHHHHHHHhhhheEEEEEecceec
Confidence 99999999999999999999999999999999999999999876 56677777777666543322111
Q ss_pred --------------------------cccccccccCCCccccccCCCCCceeEEEEecccccc-CCCcEEEcCHHhHHHH
Q 013461 242 --------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQ 294 (442)
Q Consensus 242 --------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg-~~GG~v~g~~~~i~~l 294 (442)
+|+.|++|++|+|..|.+|+. .++||+.+|++|++| ..|||..|++++++.+
T Consensus 205 MDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~~vdiinsTLgKAlGga~GGyttgp~~li~ll 283 (417)
T KOG1359|consen 205 MDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVM-GDVDIINSTLGKALGGASGGYTTGPKPLISLL 283 (417)
T ss_pred cCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCC-CcceehhhhhhhhhcCCCCCCccCChhHHHHH
Confidence 999999999999999999996 789999999999997 7899999999999999
Q ss_pred HhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 295 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 295 ~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
+..+++|.||.++||.....+.++++.+-......++.+.+.+++++..... |+++.+. ..||.++.++ +
T Consensus 284 rqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-GftIsg~-~hPI~pv~lG--------d 353 (417)
T KOG1359|consen 284 RQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA-GFTISGA-SHPICPVMLG--------D 353 (417)
T ss_pred HhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CceecCC-CCCccceecc--------c
Confidence 9999999999999999988888899887766678889999999999988775 9999864 5899999984 4
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..++.++++.+|++ ||+|...++|.++++. .+||+.+++.||+||||++++++.++.+.
T Consensus 354 a~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gk--ariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 354 ARLASKMADELLKR-GIYVIGFSYPVVPKGK--ARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred HHHHHHHHHHHHhc-CceEEeecCCcCCCCc--eEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 45677889987765 9999999999886553 56999999999999999999999887653
No 6
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=5.5e-45 Score=337.05 Aligned_cols=316 Identities=24% Similarity=0.426 Sum_probs=289.0
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhh
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPC 188 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a 188 (442)
+++--++||+|||++.||+|.+|+.+++++||.|.+|.|...|+...|.+||++||++.+.|.+++|+|.+-||.+.+..
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLft 250 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFT 250 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHH
Confidence 56677899999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hc--cCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcccccc-------------------------
Q 013461 189 FC--KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKR------------------------- 241 (442)
Q Consensus 189 ~~--~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~~~------------------------- 241 (442)
+. =||-+|+.|++.|.+++.|++-+++.-+.|+|||+++|+++|+...+..++
T Consensus 251 Lak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah 330 (570)
T KOG1360|consen 251 LAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAH 330 (570)
T ss_pred HHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHH
Confidence 75 478999999999999999999999999999999999999999988766544
Q ss_pred ----------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCCCcHHH
Q 013461 242 ----------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYL 311 (442)
Q Consensus 242 ----------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~ 311 (442)
.|+.|.+|..|.|+.|+.|+- +.+||+.||++|+||..|||++++..++|.+|..+.+|+|++++||..
T Consensus 331 ~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm-~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAaGFIFTTSLPP~v 409 (570)
T KOG1360|consen 331 KYGAITFLDEVHAVGLYGPRGAGVGERDGVM-HKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAAGFIFTTSLPPMV 409 (570)
T ss_pred HhCceeeeehhhhhccccCCCCCccccCCcc-hhhhhcccchhhhcccccceehhhhhHHHHHHHhcCceEEecCCChHH
Confidence 788889999999999999985 789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC
Q 013461 312 ASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKED 389 (442)
Q Consensus 312 aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~ 389 (442)
++.|++++++++.. ..++.+-+++.+++++.|.++ |+++.+ -.+.|+++.+++ ..+..++++.++.++
T Consensus 410 l~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~-~pSHIiPv~vgd--------a~l~~~~sd~Li~~h 479 (570)
T KOG1360|consen 410 LAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVIP-NPSHIIPVRVGD--------AALAKQASDILISKH 479 (570)
T ss_pred HHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcccC-CCcceeeeeccC--------HHHHHHHHHHHHHhc
Confidence 99999999999743 567888889999999999997 999885 478899999854 345667888888999
Q ss_pred CEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 390 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 390 GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
||+|....+|++.++. ..+||.++..||++-++.+++.+..+..++
T Consensus 480 ~iYvQaINyPTV~rG~--E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 480 NIYVQAINYPTVARGT--ERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CeEEEeccCCcccccc--eeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9999999999987764 679999999999999999999999988775
No 7
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=8.3e-43 Score=354.33 Aligned_cols=319 Identities=27% Similarity=0.465 Sum_probs=271.4
Q ss_pred CCeeEEEeecCCCCCCCC-ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhh
Q 013461 107 SGKEVVNFASANYLGLIG-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSA 185 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~-~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~a 185 (442)
+++++|||+|+||||++. ++...+++.+++++||.++|++|..||+.+.|.++|+++|+++|.++++++++|+.++..+
T Consensus 98 ~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~ 177 (489)
T PLN02483 98 KTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTI 177 (489)
T ss_pred CCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHH
Confidence 568999999999999995 6889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhc----cc-----ccc---------------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVT----AD-----NKR--------------- 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~----~~-----~~~--------------- 241 (442)
+++++++||.|++++++|.++..+++++|++++.++|+|++++++.+++.. ++ .+.
T Consensus 178 i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~ 257 (489)
T PLN02483 178 IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC 257 (489)
T ss_pred HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc
Confidence 999999999999999999999999999999999999999999998886421 10 010
Q ss_pred --------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCce
Q 013461 242 --------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGY 301 (442)
Q Consensus 242 --------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~ 301 (442)
+|++|.+|++|+|.++++++++.++||+++||||++|+.|||++++++++++++....++
T Consensus 258 ~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i~~~~~li~~l~~~~~~~ 337 (489)
T PLN02483 258 KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKRTCPAH 337 (489)
T ss_pred CHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEEEcCHHHHHHHHHhCccc
Confidence 888888899999999999998888999999999999999999999999999998776666
Q ss_pred eccCCCcHHHHHHHHHHHHHHhcC------hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhH
Q 013461 302 VFSASLPPYLASAAITAIDVLEEN------PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDL 375 (442)
Q Consensus 302 ~~s~s~~p~~aaaa~aal~~l~~~------~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~ 375 (442)
.++++++|..++++.++++.+... .+.+++++++++++++.|+++ |+++.++.++|++++.+..+
T Consensus 338 ~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~-------- 408 (489)
T PLN02483 338 LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP-------- 408 (489)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH--------
Confidence 777777777777778888876421 356789999999999999997 88877666788988887321
Q ss_pred HHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 376 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 376 ~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
....++++.+++ +||.+.+..++..+.. .+.+|++++..+|+|||++++++|+++.+.+
T Consensus 409 ~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~--~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 409 AKIPAFSRECLK-QNVAVVVVGFPATPLL--LARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred HHHHHHHHHHHH-CCcEEeeeCCCCCCCC--CceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 224467877665 5999997655433211 2469999999999999999999999987654
No 8
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=2e-42 Score=343.49 Aligned_cols=325 Identities=42% Similarity=0.670 Sum_probs=267.9
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhcc
Q 013461 112 VNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCK 191 (442)
Q Consensus 112 id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~ 191 (442)
|||+||||||+..||++++++.+++++||.++|++|.+||+...|.+||+++|+++|.++++++++|+.|+.+++.++++
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~ 80 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAK 80 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcc-----------cccc-------------------
Q 013461 192 KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA-----------DNKR------------------- 241 (442)
Q Consensus 192 ~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~-----------~~~~------------------- 241 (442)
+||+|++++..|.+++.++.++++++++++|+|++++++.++.... ..+.
T Consensus 81 ~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i 160 (392)
T PLN03227 81 RGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKEL 160 (392)
T ss_pred CCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHH
Confidence 9999999999999999999999999999999999999987765431 1110
Q ss_pred ---------------cccccccccCCCccccccCCCC-CceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccC
Q 013461 242 ---------------SNSFGVLGRSGRGLTEHCGVPV-DKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSA 305 (442)
Q Consensus 242 ---------------a~~~g~~G~~g~g~~~~~~v~~-~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~ 305 (442)
+|++|.+|++|+|..+++|+.| .++||++.|++|++|..||++++++++++.++....+++|++
T Consensus 161 ~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~ 240 (392)
T PLN03227 161 VALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSA 240 (392)
T ss_pred HHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHHhCcCccccC
Confidence 7888999999999999999975 678999999999999999999999999998887777788999
Q ss_pred CCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce----------eecCCCCCEEEEEecCCCCCch-hh
Q 013461 306 SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS----------IASNPESPIVFLILEKSTGSMK-ND 374 (442)
Q Consensus 306 s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~----------~~~~~~~~i~~~~~~~~~~~~~-~~ 374 (442)
++||+.++++.++++.+.+.+++++++++++++|++.|++. +++ +.....+|++.+.+.+...... .+
T Consensus 241 ~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 319 (392)
T PLN03227 241 SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDE 319 (392)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhh
Confidence 88998888888888665556779999999999999999753 332 1223468899999853210000 01
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCccc--ccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSML--DKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~--~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
.....++++.+++ +|+++.+...... ....+|..||++++..||+|||++++++|++++++++
T Consensus 320 ~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 320 TLILDQIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred hhHHHHHHHHHHH-CCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1123577776554 5999875321110 1111245699999999999999999999999998765
No 9
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=7.9e-42 Score=341.95 Aligned_cols=318 Identities=27% Similarity=0.469 Sum_probs=271.5
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhh
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai 186 (442)
+|++++||+||||||+++||+|++++.+++++||.+++++|..+|+.+.+.+||+++|+++|.+.++++++|++|+..++
T Consensus 43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 43 GAKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATL 122 (402)
T ss_pred CCeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcc--CCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcc-cccc----------------------
Q 013461 187 PCFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA-DNKR---------------------- 241 (442)
Q Consensus 187 ~a~~~--~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~-~~~~---------------------- 241 (442)
.++.+ ++|+|+.+..+|.++..++..+++++..++|+|+++++++++...+ ..+.
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l 202 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDL 202 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHH
Confidence 88765 7899999999999999999999999888999999999999975432 1111
Q ss_pred ------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCCCcH
Q 013461 242 ------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPP 309 (442)
Q Consensus 242 ------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p 309 (442)
+|++|++|+.|.|..+++++. +++||+++||||++|+.|||+++++++++.++....++.|+++.+|
T Consensus 203 ~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~~~~t~~~~~ 281 (402)
T TIGR01821 203 ADKYGALTYLDEVHAVGLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGFIFTTSLPP 281 (402)
T ss_pred HHHcCCEEEEeCcccccccCCCCCccchhccCC-CCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcCceecCcCCH
Confidence 888888898888887777764 4569999999999999999999999999999877667788888999
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC
Q 013461 310 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKED 389 (442)
Q Consensus 310 ~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~ 389 (442)
..++++.++++.+++.+.++++++++++++++.|+++ |+++.. +.++++.+.++. .....++.+.+++++
T Consensus 282 ~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~i~~i~~~~--------~~~a~~~~~~L~~~~ 351 (402)
T TIGR01821 282 AIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL-GIPVIP-NPSHIVPVIIGD--------AALCKKVSDLLLNKH 351 (402)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEeCC--------HHHHHHHHHHHHhcC
Confidence 9999999999998876667778889999999999886 877653 468888887632 122456777666667
Q ss_pred CEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 390 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 390 GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
||++.+..+|+++.. +..||++++..+|++|+++++++|+++++++
T Consensus 352 Gi~v~~~~~p~~~~g--~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 352 GIYVQPINYPTVPRG--TERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CEEEEeECCCCCCCC--CceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 999999877665432 2469999999999999999999999987653
No 10
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=8.7e-42 Score=341.87 Aligned_cols=329 Identities=28% Similarity=0.447 Sum_probs=274.5
Q ss_pred eeecCCCCeEE--E----CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 95 VLESAAGPHTI--I----SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 95 ~~~~~~g~~~~--~----~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.+.+.+|.++. + +|+++|||+||||||+..||+|++++.+++++||.++++++.++|+.+.+.+||+++|+++|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g 104 (406)
T PRK13393 25 DLERQAGAFPRATHHGPDGPREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG 104 (406)
T ss_pred eccccCCCcceeEEeccCCCccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC
Confidence 44455554432 2 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcchHHHHHhhhhhhcc--CCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcc-cccc----
Q 013461 169 TPDSILYSYGLSTMFSAIPCFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA-DNKR---- 241 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~~~--~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~-~~~~---- 241 (442)
.+++++++||++|+..++.++.+ +||+|++++.+|.++..+++..++++..++|+|++++++.++...+ ..+.
T Consensus 105 ~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~ 184 (406)
T PRK13393 105 KEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFE 184 (406)
T ss_pred CCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEc
Confidence 99999999999999999997765 7999999999999999999999999999999999999998875422 1111
Q ss_pred ------------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhH
Q 013461 242 ------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVV 291 (442)
Q Consensus 242 ------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i 291 (442)
+|++|++|++|.|+.+++++. +++||+++||||++|+.|||++++++++
T Consensus 185 ~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~GG~~~~~~~~~ 263 (406)
T PRK13393 185 SVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMGGYITGSAALC 263 (406)
T ss_pred CCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccCceeeCCHHHH
Confidence 888888899998887777775 4578999999999999999999999999
Q ss_pred HHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCc
Q 013461 292 DHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSM 371 (442)
Q Consensus 292 ~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 371 (442)
+.++....+|.++++.+|..++++.++++.+++....+++++++++++++.|+++ |+++. .+.++++.+.+.+
T Consensus 264 ~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~----- 336 (406)
T PRK13393 264 DFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGD----- 336 (406)
T ss_pred HHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCC-----
Confidence 9998777777788888999889999999988765545677889999999999886 77655 3578888876632
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 372 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 372 ~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.....++.+.+++++||++.+..+|.++.+ +..||++++..+|++|+++++++|++++.+
T Consensus 337 ---~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g--~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 337 ---PVLCKQISDELLDRYGIYVQPINYPTVPRG--TERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred ---HHHHHHHHHHHHHhCCEEEEeECCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 123456777666556999998877655322 246999999999999999999999998765
No 11
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=7e-41 Score=335.76 Aligned_cols=317 Identities=27% Similarity=0.465 Sum_probs=269.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~ 187 (442)
|++++||+||||||++.||++++++.+++++|+.++++++..+|..+.+.+||++||+++|.++++++++|++++..++.
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~ 124 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLS 124 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcc--CCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhc-ccccc-----------------------
Q 013461 188 CFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVT-ADNKR----------------------- 241 (442)
Q Consensus 188 a~~~--~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~-~~~~~----------------------- 241 (442)
.+.+ ++++|+.+...|.++..+++..++++..++|+|+++++++++... +..+.
T Consensus 125 ~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~ 204 (407)
T PRK09064 125 TLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLA 204 (407)
T ss_pred HHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHH
Confidence 7754 889999999999999999999999999999999999999997542 11111
Q ss_pred -----------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCCCcHH
Q 013461 242 -----------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPY 310 (442)
Q Consensus 242 -----------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~ 310 (442)
+|++|++|++|.|..++.++. ++.||+++||||++|+.|||+++++++++.++....++.|+++.+|.
T Consensus 205 ~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~ 283 (407)
T PRK09064 205 DKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGFIFTTSLPPA 283 (407)
T ss_pred HHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccCceEecCHHHHHHHHHhCccccccCcCCHH
Confidence 888888898888887777764 45699999999999999999999999999988766677788888999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 013461 311 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDG 390 (442)
Q Consensus 311 ~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~G 390 (442)
.++++.++++.+++.+..+++++++++++.+.|+++ |+++.. +.++++++.++. .....++.+.+++++|
T Consensus 284 ~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~iv~i~~~~--------~~~~~~l~~~L~~~~g 353 (407)
T PRK09064 284 IAAAALASIRHLKESNEERERHQERAAKLKAALDAA-GIPVMP-NESHIVPVMVGD--------PEKCKKASDMLLEEHG 353 (407)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeCC--------HHHHHHHHHHHHHhCC
Confidence 888999999998876666788999999999999986 887654 467888877632 1234567776666669
Q ss_pred EEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 391 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 391 V~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
|++.+..+|.++.. ...+||+++..+|++|+++++++|+++++++
T Consensus 354 i~v~~~~~p~~~~~--~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 354 IYVQPINYPTVPRG--TERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred EEEeeECCCCCCCC--CceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 99998776654322 1459999999999999999999999988764
No 12
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-42 Score=326.56 Aligned_cols=321 Identities=29% Similarity=0.475 Sum_probs=275.5
Q ss_pred EEECCe--eEEEeecCCCCCCCC-ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHH
Q 013461 104 TIISGK--EVVNFASANYLGLIG-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 180 (442)
Q Consensus 104 ~~~~G~--~~id~~s~~~l~~~~-~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~ 180 (442)
....|+ ++||++|+|||||.. +-.-.+++.+++++||...|+++.-.|+.+.|.++|+..|+|+|.+++++|+.|+.
T Consensus 129 fk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~ 208 (519)
T KOG1357|consen 129 FKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFA 208 (519)
T ss_pred EEeccceeeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEecccc
Confidence 334454 699999999999994 45667788889999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhc----cccc-----c----------
Q 013461 181 TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVT----ADNK-----R---------- 241 (442)
Q Consensus 181 a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~----~~~~-----~---------- 241 (442)
+|...++++++||..|+.|+..|.++..|++++|++++.|+||||.+||++|++.- +++. .
T Consensus 209 TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysm 288 (519)
T KOG1357|consen 209 TNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSM 288 (519)
T ss_pred ccccCcceeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceec
Confidence 99999999999999999999999999999999999999999999999999998742 1110 0
Q ss_pred -------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHh
Q 013461 242 -------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRL 296 (442)
Q Consensus 242 -------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~ 296 (442)
+|++|..|++|+|.++++++++.++||++|||.|++|+.||+++|+++++++++.
T Consensus 289 Eg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GGyiagsk~lid~lrt 368 (519)
T KOG1357|consen 289 EGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGGYIAGSKELIDYLRT 368 (519)
T ss_pred cCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccceecCcHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred hCCceeccCCCcHHHHHHHHHHHHHHhc------ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCC
Q 013461 297 SSSGYVFSASLPPYLASAAITAIDVLEE------NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGS 370 (442)
Q Consensus 297 ~~~~~~~s~s~~p~~aaaa~aal~~l~~------~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~ 370 (442)
.+...++.+++||..+...+.+++.+.. ..+..+++.+|..+++..|.+. |+-+.+..++|++++.+-.+..
T Consensus 369 ~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~k- 446 (519)
T KOG1357|consen 369 PSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPAK- 446 (519)
T ss_pred CCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCccc-
Confidence 8888888888999988888999998863 2467789999999999999986 9999988899999988754321
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 371 MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 371 ~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
...+.+++|++ ++.+....+|..+- ...+.|+|.++.||.|+++++++.+.+.-+.
T Consensus 447 -------~~~f~r~~l~~-nigvVvvgfPatpl--~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 447 -------IVAFSREMLER-NIGVVVVGFPATPL--LESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred -------ccHHHHHHHhc-CceEEEEeCCCchH--HHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 22456666665 67666655543110 0135899999999999999999999886543
No 13
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=2.3e-39 Score=324.91 Aligned_cols=317 Identities=25% Similarity=0.438 Sum_probs=266.9
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhh
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai 186 (442)
+|+++++|+||||+++++||++++++.+++++||.++++++.++|..+.+.+||++||+++|.++++++++|++|+..++
T Consensus 44 ~~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i 123 (410)
T PRK13392 44 GPRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAAL 123 (410)
T ss_pred CCceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred hhhcc--CCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcc-cccc----------------------
Q 013461 187 PCFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA-DNKR---------------------- 241 (442)
Q Consensus 187 ~a~~~--~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~-~~~~---------------------- 241 (442)
.++.. +||+|+++..+|.++..+++..|+++..++++|++++++.++.... +.+.
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l 203 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDL 203 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHH
Confidence 87754 8999999999999999999999999988999999999988875432 1111
Q ss_pred ------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCCCcH
Q 013461 242 ------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPP 309 (442)
Q Consensus 242 ------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p 309 (442)
+|++|.+|++|.|+.++.++. +++|++++||||++|+.|||+++++++++.++....++.++++.+|
T Consensus 204 ~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~ 282 (410)
T PRK13392 204 ADRYNALTYVDEVHAVGLYGARGGGIAERDGLM-DRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFIFTTALPP 282 (410)
T ss_pred HHHcCCEEEEECCccccCcCCCCCchhhhccCC-CCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcchhccCcCCH
Confidence 778888888888876666653 4578999999999999999999999999998877777778888888
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC
Q 013461 310 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKED 389 (442)
Q Consensus 310 ~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~ 389 (442)
..++++.++|+.++.....+++++++++++++.|+++ |+++. ++.++++.+.++. .....++++++++++
T Consensus 283 ~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~--------~~~~~~~~~~L~~~~ 352 (410)
T PRK13392 283 AVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD--------PTLCKAISDRLMSEH 352 (410)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------HHHHHHHHHHHHHhC
Confidence 8888889999988766667788999999999999987 88765 3577888776632 122457887766667
Q ss_pred CEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 390 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 390 GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
||++.+..++.++.+ ...+|++++..+|++|+++++++|+++.++
T Consensus 353 GI~v~~~~~p~~~~~--~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 353 GIYIQPINYPTVPRG--TERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CEEEeeeCCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 999998876654322 246999999999999999999999988764
No 14
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=4.4e-38 Score=314.25 Aligned_cols=331 Identities=34% Similarity=0.546 Sum_probs=271.9
Q ss_pred CCCeeecCCCCeEEE-CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC
Q 013461 92 EPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP 170 (442)
Q Consensus 92 ~~~~~~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e 170 (442)
.++.+.+..|.++++ +|+++|||++++|||++.+|++++++.+++++||.++++++.+.|+.+.+.++|+.+|+++|.+
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~ 99 (393)
T TIGR01822 20 SERIITSPQGADIRVADGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTE 99 (393)
T ss_pred cccccccCCCceEEecCCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC
Confidence 367788899999997 9999999999999999999999999999999998888899988899999999999999999999
Q ss_pred cEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcc---cccc------
Q 013461 171 DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA---DNKR------ 241 (442)
Q Consensus 171 ~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~---~~~~------ 241 (442)
+++++++|++|+..++.+++++||.|++++++|.++..++++.+++.+.++++|++++++.+++... +.+.
T Consensus 100 ~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v 179 (393)
T TIGR01822 100 DTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGV 179 (393)
T ss_pred cEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCC
Confidence 9999999999999999999999999999999999999999999988888889999999998875311 1110
Q ss_pred ----------------------------cccccccccCCCccccccCCCCCceeEEEEecccccc-CCCcEEEcCHHhHH
Q 013461 242 ----------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALA-TEGGFCTGSARVVD 292 (442)
Q Consensus 242 ----------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg-~~GG~v~g~~~~i~ 292 (442)
+|++|.+|.+|.+..+..++. +++|++++|+||+++ ..|||+++++++++
T Consensus 180 ~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r~G~~~~~~~~~~ 258 (393)
T TIGR01822 180 FSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGASGGFTTARKEVVE 258 (393)
T ss_pred ccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCCcEEEEeCHHHHH
Confidence 666777777777766666664 468999999999996 46799999999999
Q ss_pred HHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch
Q 013461 293 HQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK 372 (442)
Q Consensus 293 ~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 372 (442)
.++.....+.++++.+|..++++.++++.++..++++++++++++++++.|++. |+++. .+.++++.+.+..
T Consensus 259 ~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~------ 330 (393)
T TIGR01822 259 LLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD------ 330 (393)
T ss_pred HHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC------
Confidence 988765677788777777777788888877665678899999999999999886 77765 3356777766532
Q ss_pred hhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 373 NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 373 ~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.....++++.+++ +||.+....++..+.. ...+|++++..+|++||++++++|+++.++
T Consensus 331 --~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~--~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 331 --AVLAQRFARRLLE-EGIYVTGFFYPVVPKG--QARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred --HHHHHHHHHHHHH-CCeeEeeeCCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 1234567776554 5999985444322211 235999999999999999999999988664
No 15
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1e-36 Score=305.47 Aligned_cols=315 Identities=25% Similarity=0.336 Sum_probs=259.6
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhh
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai 186 (442)
+|+.++||+|++|||+..||++++++.+++++||.+.++++.+.+..+.+.+||++||+++|.++++++++|++|+..++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l 131 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLL 131 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH
Confidence 56789999999999999999999999999999987766566677777899999999999999999999999999999999
Q ss_pred hhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcccccc-------------------------
Q 013461 187 PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKR------------------------- 241 (442)
Q Consensus 187 ~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~~~------------------------- 241 (442)
+++.++||.|+++...|.+++.++...+++++.++++|+++|++.+++.......
T Consensus 132 ~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~ 211 (407)
T PRK07179 132 QTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFG 211 (407)
T ss_pred HHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999998753211000
Q ss_pred -------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHH
Q 013461 242 -------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASA 314 (442)
Q Consensus 242 -------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaa 314 (442)
+|++|.+|.+|.|..+++++. +.+|++++|+||++|..+|++++++++++.++....++.++++.+|..+++
T Consensus 212 ~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa 290 (407)
T PRK07179 212 CVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAG 290 (407)
T ss_pred CEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHH
Confidence 777888888888887777775 467999999999999888999999999998876665667777777777777
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEe
Q 013461 315 AITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 315 a~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
+.++++.+++.++.+++++++++++++.|.++ |+++. +.++++++.++. ......+.+. |.++||++.
T Consensus 291 ~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~--~~~~i~~l~~~~--------~~~~~~~~~~-L~~~GI~~~ 358 (407)
T PRK07179 291 LEATLEVIESADDRRARLHANARFLREGLSEL-GYNIR--SESQIIALETGS--------ERNTEVLRDA-LEERNVFGA 358 (407)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCEEEEEeCC--------HHHHHHHHHH-HHHCCceEe
Confidence 77888888776678899999999999999987 88765 357888887632 1123355554 556799866
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
...++..+.. +..+||+++..+|++|+++++++|++++++
T Consensus 359 ~~~~p~~~~~--~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 359 VFCAPATPKN--RNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred eecCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 5444432111 356999999999999999999999998765
No 16
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=5.6e-35 Score=291.06 Aligned_cols=331 Identities=30% Similarity=0.563 Sum_probs=265.0
Q ss_pred CCCeeecCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCc
Q 013461 92 EPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPD 171 (442)
Q Consensus 92 ~~~~~~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~ 171 (442)
++.++++++|.+++++|+++|||++++++|+.++|.+++++.+++++++...++++.+.|..+++.++++++++++|.+.
T Consensus 16 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~ 95 (385)
T TIGR01825 16 SIRVLESAQGPRVRVNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA 95 (385)
T ss_pred cccccccCCCceEEECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc
Confidence 46789999999999999999999999999999999999999999998876666667778899999999999999999988
Q ss_pred EEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcc-cccc---------
Q 013461 172 SILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA-DNKR--------- 241 (442)
Q Consensus 172 ~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~-~~~~--------- 241 (442)
.+++++|++++..++.+++++||+|++++++|+++..++.+.+.++..+++.|++++++.+++... ..+.
T Consensus 96 ~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~ 175 (385)
T TIGR01825 96 ALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSM 175 (385)
T ss_pred EEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcC
Confidence 999999999999999999999999999999999999999999999988888999999988775321 1111
Q ss_pred -------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHh
Q 013461 242 -------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRL 296 (442)
Q Consensus 242 -------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~ 296 (442)
+++.|+++.+|.+...+++++ .++|++++||||++|..|||+++++++++.+..
T Consensus 176 tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~gG~~~~~~~~~~~~~~ 254 (385)
T TIGR01825 176 DGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVGGYAAGHKELIEYLKN 254 (385)
T ss_pred CCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCCCEEecCHHHHHHHHH
Confidence 444454554444445556665 578999999999999889999999999999876
Q ss_pred hCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHH
Q 013461 297 SSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 297 ~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 376 (442)
....+.+++..+|..++++.++++.+++..+..++++++++++.+.|+++ |+++.. +.++++.+.+.. ..
T Consensus 255 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~--------~~ 324 (385)
T TIGR01825 255 RARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL-GYDTGG-SETPITPVVIGD--------EK 324 (385)
T ss_pred hCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEECC--------HH
Confidence 55455566656777777888888877655567888999999999999886 887763 456777776531 11
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
...++++.++++ ||.+.+..++..+.. ...||++++..+|++|+++++++|++++++
T Consensus 325 ~~~~~~~~L~~~-gi~v~~~~~~~~~~~--~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 325 AAQEFSRRLFDE-GIFAQSIVFPTVPRG--TARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred HHHHHHHHHHHC-CcEEcccCCCCCCCC--CceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 234677776665 999865444322111 145999999999999999999999998764
No 17
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=7.5e-35 Score=290.11 Aligned_cols=332 Identities=30% Similarity=0.484 Sum_probs=265.8
Q ss_pred cccCCCeeecCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 89 MRCEPPVLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 89 ~~~~~~~~~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.+...|++++++|.+++.+|++||||++++++|+.++|++++++.+++++|+.+.+.++.++|..+...++++.+++++|
T Consensus 19 ~~~~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~ 98 (385)
T PRK05958 19 LYRSLRPREGGAGRWLVVDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG 98 (385)
T ss_pred CCccccccccCCCceeEeCCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC
Confidence 35568999999999999999999999998888888899999999999999887777777788888999999999999999
Q ss_pred CCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcccccc-------
Q 013461 169 TPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADNKR------- 241 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~~~------- 241 (442)
.++.+++++|++++..++.+++++||.|++++++|+++..++.+.|++++.++.+|++++++.++...+....
T Consensus 99 ~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~ 178 (385)
T PRK05958 99 AERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVF 178 (385)
T ss_pred CCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecc
Confidence 8899999999999988888899999999999999999999999999999999999999999988753111100
Q ss_pred ---------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHH
Q 013461 242 ---------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQ 294 (442)
Q Consensus 242 ---------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l 294 (442)
+|+.|.++.+|.+....+++...+.+|+++||||++|+.|||+++++++++.+
T Consensus 179 ~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~ 258 (385)
T PRK05958 179 SMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSETLIDYL 258 (385)
T ss_pred cCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCCcEEEcCHHHHHHH
Confidence 55555555444444433444433457889999999998899999999999887
Q ss_pred HhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 295 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 295 ~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
......+.++++.+|.+++++.++++.++..+++.++++++++++.+.|++. ++++. .+.++++++.++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~-------- 328 (385)
T PRK05958 259 INRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD-------- 328 (385)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC--------
Confidence 6555556666677888888888899887655568899999999999999886 77765 3577888887632
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.....++.+.++ ++||.+.+...+..+.+ +..+|++++..+|++|+++++++|+++
T Consensus 329 ~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~--~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 329 NERALALAAALQ-EQGFWVGAIRPPTVPAG--TSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHHHHHHHH-HCCceEecccCCCCCCC--CceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 122456787654 56999987544322111 245999999999999999999999875
No 18
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=1e-34 Score=286.40 Aligned_cols=324 Identities=31% Similarity=0.522 Sum_probs=260.6
Q ss_pred eeecCCCCeEEECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEE
Q 013461 95 VLESAAGPHTIISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSIL 174 (442)
Q Consensus 95 ~~~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~ 174 (442)
.++++.|.++..+|+++|||++++++|+..+|++++++.+++++|+.+.++++..+|..+...++++.++++++.++.++
T Consensus 2 ~~~~~~~~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~ 81 (360)
T TIGR00858 2 PLDRGPGPEVVRDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALL 81 (360)
T ss_pred CcccCCCCeEEECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEE
Confidence 35678999999999999999999989988899999999999999887777777778888999999999999999989999
Q ss_pred EcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhc-ccccc------------
Q 013461 175 YSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVT-ADNKR------------ 241 (442)
Q Consensus 175 ~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~-~~~~~------------ 241 (442)
+++|++++..++.+++++||.|++++++|.+...+++..+++++.++.+|++++++.+++.. .....
T Consensus 82 ~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~ 161 (360)
T TIGR00858 82 FSSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGD 161 (360)
T ss_pred ECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCC
Confidence 99999988888888899999999999999999999999999999998899999999887532 11000
Q ss_pred ----------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCC
Q 013461 242 ----------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 ----------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~ 299 (442)
+|+.|.++..+.+...++++.+++.||+++||||++|+.|||+++++++++.+.....
T Consensus 162 ~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~~~~~~~~~~~~~ 241 (360)
T TIGR00858 162 IAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDYLINRAR 241 (360)
T ss_pred CcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcCHHHHHHHHHhCc
Confidence 4555555544445555667766788999999999999989999999999998865555
Q ss_pred ceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 013461 300 GYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 379 (442)
Q Consensus 300 ~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 379 (442)
.+.++++.++..++++.++++.++..++++++++++++++.+.|+++ ++++. ++.++++++.++. .....
T Consensus 242 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------~~~~~ 311 (360)
T TIGR00858 242 TLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGD--------NASAL 311 (360)
T ss_pred cceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCC--------HHHHH
Confidence 55566666777777788889877665668899999999999999886 77665 3567888888732 12244
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
++.+.++ ++||.+.++..+..... +..+|++++..+|++|+++++++|+
T Consensus 312 ~~~~~l~-~~gI~v~~~~~~~~~~~--~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 312 ALAEELQ-QQGIFVGAIRPPTVPAG--TSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHH-HCCeeEeeeCCCCCCCC--CceEEEEEcCCCCHHHHHHHHHhhC
Confidence 6777654 56999987654322111 2459999999999999999999874
No 19
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=5.7e-34 Score=284.97 Aligned_cols=330 Identities=34% Similarity=0.581 Sum_probs=261.1
Q ss_pred CeeecCCCCeEEE-CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcE
Q 013461 94 PVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDS 172 (442)
Q Consensus 94 ~~~~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~ 172 (442)
..+++++|.++|. +|+++|||++++|+|++++|++++++.+++++++.++++++.+.|..+++.++++.+++++|.++.
T Consensus 26 ~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~ 105 (397)
T PRK06939 26 RVITSPQGADITVADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDA 105 (397)
T ss_pred ccccCCCCceEEecCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcE
Confidence 4678899999996 999999999999999999999999999999988776777777889999999999999999998889
Q ss_pred EEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcc---cccc--------
Q 013461 173 ILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTA---DNKR-------- 241 (442)
Q Consensus 173 i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~---~~~~-------- 241 (442)
+++++|++++..++.+++++||.|++++++|+++..++.+.+++++.++++|++++++.+++... +.+.
T Consensus 106 i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 185 (397)
T PRK06939 106 ILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFS 185 (397)
T ss_pred EEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence 99999999999999999999999999999999999999999999999999999999988865211 1110
Q ss_pred --------------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHHhHHHH
Q 013461 242 --------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARVVDHQ 294 (442)
Q Consensus 242 --------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~~i~~l 294 (442)
++++|.++.+|.+..+.+++. +++|++++||||++ |..|||+++++++++.+
T Consensus 186 ~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~~l 264 (397)
T PRK06939 186 MDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKALGGASGGYTAGRKEVIDWL 264 (397)
T ss_pred CCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHhCccCceEEEeCHHHHHHH
Confidence 344444444333333445553 35789999999999 66789999999999998
Q ss_pred HhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 295 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 295 ~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
+.....+.++++.+|..++++.++++.+++..+++++++++++++.+.|++. ++++.. +.++++.+.+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~-------- 334 (397)
T PRK06939 265 RQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA-GFTLGP-GEHPIIPVMLGD-------- 334 (397)
T ss_pred HHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEECC--------
Confidence 8765556666666777677778888887665678899999999999999886 766543 456666555421
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.....++++.++++ ||.+.+..++..+.. ...||++++..+|++|+++++++|+++++++
T Consensus 335 ~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~--~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 335 AKLAQEFADRLLEE-GVYVIGFSFPVVPKG--QARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHHHHHHHHHC-CceEeeeCCCCCCCC--CceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 12245678776555 999986544322111 2469999999899999999999999987664
No 20
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=4.5e-34 Score=282.58 Aligned_cols=303 Identities=21% Similarity=0.295 Sum_probs=245.1
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhc-------CCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKY-------GVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLST 181 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~-------g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a 181 (442)
.++|||+||||||+..+|.+++++.+++++| |.+++|++.++|+.+.++++|+++|+++|.+.++++++|+.+
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a 83 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMA 83 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHH
Confidence 3689999999999999999999999999999 688999999999999999999999999999999999999999
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhccc--ccc------------------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTAD--NKR------------------ 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~--~~~------------------ 241 (442)
+..++..+.++||+|+.|..+|.+++.+++......+.++|+|+++|++.++..... ...
T Consensus 84 ~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~ 163 (370)
T PRK05937 84 NLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLE 163 (370)
T ss_pred HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHH
Confidence 988888888899999999999999999998876667788999999999999854211 010
Q ss_pred -----------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceecc
Q 013461 242 -----------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFS 304 (442)
Q Consensus 242 -----------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s 304 (442)
+|++|.+|.+|.|....++.+ +.++++.||||++|..|+.+++.+++.+.+.....++.|+
T Consensus 164 eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~--~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~~~~~~~~~s 241 (370)
T PRK05937 164 QIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE--NFYAVLVTYSKALGSMGAALLSSSEVKQDLMLNSPPLRYS 241 (370)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC--CCcEEEEechhhhhcCceEEEcCHHHHHHHHHhCCCCeec
Confidence 888888888888877666643 3456789999999988887888888777776555678888
Q ss_pred CCCcHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 305 ASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 305 ~s~~p~~aaaa~aal~~l~~~-~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
++.+|..++++.++++.+++. ...+++++++.+++.+.|... + .+++.++.++.. + ..++.+
T Consensus 242 ~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~-~-------~~~~~~i~~~~~------~---~~~~~~ 304 (370)
T PRK05937 242 TGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA-A-------PGCVQPIFLPGI------S---EQELYS 304 (370)
T ss_pred CCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC-C-------CCCEEEEEeCCh------h---HHHHHH
Confidence 888888888888999988643 446788899999998887642 1 122344555321 1 234555
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.|.++||++....++. .+.||++++..+|+|||++++++|+++++++
T Consensus 305 -~L~~~gi~v~~~~~~~------~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 305 -KLVETGIRVGVVCFPT------GPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred -HHHHCCeeEEeeCCCC------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4666799988655432 2459999999999999999999999988765
No 21
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-32 Score=272.31 Aligned_cols=327 Identities=20% Similarity=0.324 Sum_probs=241.1
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcC-CCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASANYLGLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g-~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
..+.+.+++|+++| .||++||||+|++|+|+.+||+|++|+.++++++| .++++++..+ ..+.+.+++++|++++|.
T Consensus 28 ~~~~~~~~~G~~~~d~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~-~~~~~~~l~~~la~~~~~ 106 (402)
T PRK07505 28 NGLTVGEREGILITLADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRV-RSQILKDLEEALSELFGA 106 (402)
T ss_pred ccceeeccCCccEEecCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhh-hhHHHHHHHHHHHHHhCC
Confidence 45788999999999 59999999999999998889999999999999987 3555444433 578899999999999998
Q ss_pred CcEEEEcchHHHHHhhhhhhc------cCCCEEEeCCCchHHHHH--HHHhcCCeEEEecCCCHHHHHHHHHhhcccccc
Q 013461 170 PDSILYSYGLSTMFSAIPCFC------KKGDLIVADEGVHWGIQN--GLYLSRSTVVYFKHNDMDSLRNTLERVTADNKR 241 (442)
Q Consensus 170 e~~i~~~sG~~a~~~ai~a~~------~~gd~Vi~~~~~h~s~~~--~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~~~ 241 (442)
+++++++|++|+..+++.+. +++++|+.+..+|+++.. +....+.+++.++++|++++++.++..+.....
T Consensus 107 -~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~~~~~~vl 185 (402)
T PRK07505 107 -SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHNDLDALEDICKTNKTVAYV 185 (402)
T ss_pred -CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhcCCCEEEE
Confidence 89999999999998886532 356688999999998643 334456788999999999999988643211000
Q ss_pred -------------------------------cccccccccCCCccc-cccCCCCCceeEEEEeccccccCCCcEEE-cCH
Q 013461 242 -------------------------------SNSFGVLGRSGRGLT-EHCGVPVDKIDIVTAAMGHALATEGGFCT-GSA 288 (442)
Q Consensus 242 -------------------------------a~~~g~~G~~g~g~~-~~~~v~~~~~diii~S~sK~lg~~GG~v~-g~~ 288 (442)
+|+++.+|++|.+.. +++++...+++++++||||++|+.||+++ +++
T Consensus 186 ~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~Gg~~~~~~~ 265 (402)
T PRK07505 186 ADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASGGVIMLGDA 265 (402)
T ss_pred EecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccCeEEEeCCH
Confidence 666666777776643 56775224667889999999998889986 588
Q ss_pred HhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecC
Q 013461 289 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEK 366 (442)
Q Consensus 289 ~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~ 366 (442)
++++.++....+++|+++.++..++++.++++.+.+ ..++.++++++.+.+.+.+... .. ....++.++.+..
T Consensus 266 ~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~-g~~~~i~~~~~~~ 340 (402)
T PRK07505 266 EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----QS-GSFLPIRLIYIGD 340 (402)
T ss_pred HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----CC-CCCCCEEEEEeCC
Confidence 999998877778888888888888889999986543 2445566666665544332211 11 1234444444321
Q ss_pred CCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 367 STGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 367 ~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.....++.+.++ ++||++.+..++..+.. +..||++++..+|++|+++++++|++++.+
T Consensus 341 --------~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~--~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 341 --------EDTAIKAAKQLL-DRGFYTSPVFFPVVAKG--RAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred --------HHHHHHHHHHHH-HCCCeEeeecCCCCCCC--CceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 122456777655 56999998755543211 146999999999999999999999998765
No 22
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=6.3e-31 Score=258.38 Aligned_cols=312 Identities=35% Similarity=0.597 Sum_probs=240.5
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhh
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPC 188 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a 188 (442)
|+|+||+|++|||...||+|++++++++++|+.+.++++...|..+...++++.+++++|.+..+++++|++++..++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~ 80 (349)
T cd06454 1 KKVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLST 80 (349)
T ss_pred CCceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHH
Confidence 47999999999999999999999999999987765666677788999999999999999998899999999999988999
Q ss_pred hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhc--ccccc-------------------------
Q 013461 189 FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVT--ADNKR------------------------- 241 (442)
Q Consensus 189 ~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~--~~~~~------------------------- 241 (442)
++++||.|++++++|.++..+++..|+++++++..|.+++++++++.. .....
T Consensus 81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~ 160 (349)
T cd06454 81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKK 160 (349)
T ss_pred hcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHH
Confidence 999999999999999999999999999999888889999999987642 11110
Q ss_pred ---------cccccccccCCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHH
Q 013461 242 ---------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLA 312 (442)
Q Consensus 242 ---------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~a 312 (442)
+|++|.++..+.+. ........+.|++++|++|++|..||++++++++++.++.....+.++++.++..+
T Consensus 161 ~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (349)
T cd06454 161 YGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFSTSLPPAVA 239 (349)
T ss_pred cCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhccCCCCHHHH
Confidence 33334333222221 12233345679999999999998899999999998888765555555566778888
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE
Q 013461 313 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF 392 (442)
Q Consensus 313 aaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~ 392 (442)
+++.++++.+++.+..+++++++.+++.+.|.+. |+++..++.+.+.++.+.. .....++.+.+++ +||.
T Consensus 240 ~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~L~~-~gI~ 309 (349)
T cd06454 240 AAALAALEVLQGGPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDD--------PAKAVAFSDALLE-RGIY 309 (349)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCC--------hHHHHHHHHHHHh-CCce
Confidence 8888899887665567889999999999999886 7776654344444443321 1123567776554 5999
Q ss_pred EeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 393 VVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 393 v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
+.+..++..... ...+|++++..+|++|+++++++|+++
T Consensus 310 ~~~~~~~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 310 VQAIRYPTVPRG--TARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEecCCccCCC--CCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 987544221111 245999999989999999999999864
No 23
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-31 Score=256.44 Aligned_cols=324 Identities=20% Similarity=0.261 Sum_probs=241.6
Q ss_pred cCCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 91 CEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 91 ~~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
..|.++++++|+|+| +|||+||||.++ +.++++ +||+|++|+.+++.++.... ++. ...+...++.++|.+.+
T Consensus 37 ~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~--~~~--~~~e~~v~~ae~L~~~~ 112 (447)
T COG0160 37 RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTH--TRD--LYYEPYVELAEKLTALA 112 (447)
T ss_pred cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhccc--CCc--ccchhHHHHHHHHHHhC
Confidence 467889999999999 699999999664 667777 58999999999999864322 222 23388889999999988
Q ss_pred CC---CcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecCC----C
Q 013461 168 GT---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN----D 224 (442)
Q Consensus 168 g~---e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~~----d 224 (442)
.. +.+++.+||++||++|++ +.+++..+|.++..+|+.+..++.+++.. ++.+|.. +
T Consensus 113 p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~ 192 (447)
T COG0160 113 PGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRC 192 (447)
T ss_pred CcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccC
Confidence 64 568889999999999995 56899999999999999999999888753 2222221 1
Q ss_pred -------------HHHHHHHHHhhcccc--cc----------------------------------------cccccccc
Q 013461 225 -------------MDSLRNTLERVTADN--KR----------------------------------------SNSFGVLG 249 (442)
Q Consensus 225 -------------~~~Le~~l~~~~~~~--~~----------------------------------------a~~~g~~G 249 (442)
.+.+|+.+....... .. +.++|++|
T Consensus 193 p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG 272 (447)
T COG0160 193 PFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG 272 (447)
T ss_pred cccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc
Confidence 123444343322110 00 55555555
Q ss_pred cCCCccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChH
Q 013461 250 RSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPD 327 (442)
Q Consensus 250 ~~g~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~ 327 (442)
+ ....||+|+.|| | .||+|++|. +.|.+++++++++ .....+.++|. .+|++|++++++|+.++++ .
T Consensus 273 ~--~fa~E~~gv~PD---i--vt~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~--GNpva~Aaa~AvL~vie~e-~ 341 (447)
T COG0160 273 K--MFAFEHFGVEPD---I--VTLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFG--GNPVACAAALAVLDVIEEE-N 341 (447)
T ss_pred c--chhhhhcCCCCC---E--EEecccccCCCceeEEeccHHhcc-cCCcccCCCCC--cCHHHHHHHHHHHHHHHHc-c
Confidence 2 345699999885 4 459999974 3378999999999 54555555554 4999999999999999875 5
Q ss_pred HHHHHHHHHHHHHHhhccCC-CceeecC--CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccC
Q 013461 328 LITKLKKNTAILRTGLSDIH-GLSIASN--PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKC 404 (442)
Q Consensus 328 ~~~~l~~~~~~l~~~L~~~~-g~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~ 404 (442)
+.++.++.++++++.|.++. .+++.++ ..+-++.+.+..+..+.+++...+.+++++|+++ |+.+......
T Consensus 342 L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~G~~----- 415 (447)
T COG0160 342 LLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTCGPH----- 415 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEeccCCC-----
Confidence 99999999999999998762 2444443 2456888888765444456667788999987765 8877654421
Q ss_pred CCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 405 RLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 405 ~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+.|||.++..+|++|+|+++++|+++++++
T Consensus 416 --~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 416 --GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred --CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 1349999999999999999999999998764
No 24
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-31 Score=254.61 Aligned_cols=314 Identities=19% Similarity=0.251 Sum_probs=238.1
Q ss_pred CCeeecCCCCeEEE-CCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTII-SGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~~-~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
+.++++++|.|+|+ +||+||||.++ ...+++ .||++++++++|+++....+. .+ ..+...+|.++|++..+
T Consensus 25 ~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn---~~--~~~~~~~la~~L~~~s~~ 99 (404)
T COG4992 25 PVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSN---LF--YNEPQAELAEKLVELSPF 99 (404)
T ss_pred ceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccc---cc--CChHHHHHHHHHHhhCcc
Confidence 45688999999994 99999999654 333444 489999999999999654432 22 36888999999999997
Q ss_pred CCcEEEEcchHHHHHhhhhhh---cc---CCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHHHHHH
Q 013461 169 TPDSILYSYGLSTMFSAIPCF---CK---KGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDSLRN 230 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~---~~---~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~~Le~ 230 (442)
.++++++|||+|||++||+.. .+ +..+|.+.+.+|+-+..++.+++- .+..+|+||++++++
T Consensus 100 ~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ 179 (404)
T COG4992 100 ADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA 179 (404)
T ss_pred ccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHH
Confidence 999999999999999999643 33 557899999999988877766542 256778899999999
Q ss_pred HHHhhcccccc------------------------------------cccccccccCCC-ccccccCCCCCceeEEEEec
Q 013461 231 TLERVTADNKR------------------------------------SNSFGVLGRSGR-GLTEHCGVPVDKIDIVTAAM 273 (442)
Q Consensus 231 ~l~~~~~~~~~------------------------------------a~~~g~~G~~g~-g~~~~~~v~~~~~diii~S~ 273 (442)
++...+..... +.++|+ ||. ..++|+|+.|| +.|+
T Consensus 180 ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GR---TGk~fA~e~~gV~PD-----I~tl 251 (404)
T COG4992 180 AIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGR---TGKLFAYEHYGVEPD-----ILTL 251 (404)
T ss_pred HhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCc---cchHHHHHHhCCCCC-----EEEe
Confidence 99874321110 445444 555 44689999986 5569
Q ss_pred cccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC-Cce
Q 013461 274 GHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH-GLS 350 (442)
Q Consensus 274 sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~-g~~ 350 (442)
+|++|. +-|.++.++++.+.+....++.+|.+ +|++|+++.++++++.+ +++.++.++++++|++.|.++. .++
T Consensus 252 aK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~-e~ll~~v~~~g~~~~~~L~~l~~~~~ 328 (404)
T COG4992 252 AKALGGGFPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLE-EGLLENVREKGEYLLQRLRELKRRYP 328 (404)
T ss_pred eccccCCccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999972 22557777776777776667766665 99999999999999976 4599999999999999998862 222
Q ss_pred eec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHH
Q 013461 351 IAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACE 428 (442)
Q Consensus 351 ~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~ 428 (442)
+.. ...+-++.+.+..+. .+.++++. +.++|+++.+... ..||+.++..+|+||++++++
T Consensus 329 ~v~~vRG~GLmiGiel~~~~--------~a~~~~~~-~~~~gvL~~~a~~---------~ViR~~PpL~i~~eei~~~~~ 390 (404)
T COG4992 329 LVKEVRGRGLMIGIELKEPY--------RARDIVRA-LREEGVLVLPAGP---------NVIRFLPPLVITEEEIDEALD 390 (404)
T ss_pred ceeeeecceeEEEEEecCcc--------cHHHHHHH-HHHCCeEEecCCC---------CeEEecCCccCCHHHHHHHHH
Confidence 221 235678888885431 13467775 5566999987654 239999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 013461 429 SLKRISAVVLRD 440 (442)
Q Consensus 429 ~l~~~~~~~~~~ 440 (442)
++++++.....+
T Consensus 391 ~l~~~l~~~~~~ 402 (404)
T COG4992 391 ALERALAAASAR 402 (404)
T ss_pred HHHHHHHHhhhc
Confidence 999999876544
No 25
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=7.1e-31 Score=261.83 Aligned_cols=312 Identities=19% Similarity=0.266 Sum_probs=231.8
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcC-CCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g-~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
|.++++++|.|+| .||++||||.| +++||+. ||+|++|+.++++++. .+. ..+.+.+.+|+++|+++.
T Consensus 18 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~la~~L~~~~ 90 (397)
T TIGR03246 18 PFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHA-HPELVKALIEQADKLWHIGN------GYTNEPVLRLAKKLVDAT 90 (397)
T ss_pred CceEEEeecCEEEeCCCCEEEECCcCHhhccCCCC-CHHHHHHHHHHHHhcccccC------ccCCHHHHHHHHHHHhhC
Confidence 5788999999999 59999999977 5889994 9999999999999842 221 124678899999999999
Q ss_pred CCCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHH
Q 013461 168 GTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMD 226 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~ 226 (442)
+.+++++++||++|++.|++.. .+|.++|.++..+|+++..++.+++. .+..++|||++
T Consensus 91 ~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 170 (397)
T TIGR03246 91 FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLA 170 (397)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHH
Confidence 8899999999999999999865 36778999999999998887776653 34578899999
Q ss_pred HHHHHHHhhcccc--------------cc---------------------cccccccccCCCcc-ccccCCCCCceeEEE
Q 013461 227 SLRNTLERVTADN--------------KR---------------------SNSFGVLGRSGRGL-TEHCGVPVDKIDIVT 270 (442)
Q Consensus 227 ~Le~~l~~~~~~~--------------~~---------------------a~~~g~~G~~g~g~-~~~~~v~~~~~diii 270 (442)
++++.+....... .. .| .|+ |++|.+. .+++++.|| ++
T Consensus 171 ~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~-Gr~G~~~a~~~~gv~pD---i~- 244 (397)
T TIGR03246 171 AAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGV-GRTGELYAYMHYGVTPD---IL- 244 (397)
T ss_pred HHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcC-CccccchhhhhcCCCCC---EE-
Confidence 9999885321100 00 22 233 5566654 467888764 44
Q ss_pred EeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC-
Q 013461 271 AAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH- 347 (442)
Q Consensus 271 ~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~- 347 (442)
||||++|. +.|++++++++++.++......+| +.+|+.++++.++|+.+++ +++.++++++++++++.|+++.
T Consensus 245 -t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~--~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~~~~l~~~L~~l~~ 320 (397)
T TIGR03246 245 -TSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTY--GGNPLACAVAGKVLDLVNT-PELLAGVKQRHDLFVDGLEKINA 320 (397)
T ss_pred -EeehhhhCCcceeEEEEcHHHHHhccCCCcCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 79999972 226778899999988654333344 3588889999999998865 4589999999999999998761
Q ss_pred Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHH
Q 013461 348 GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVK 425 (442)
Q Consensus 348 g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~ 425 (442)
.+.+.. ...+.++.+.+..+ ......++++.++ ++||++.+.. ++.+|++++..+|++||++
T Consensus 321 ~~~~~~~vrg~G~~~~i~~~~~------~~~~~~~~~~~l~-~~Gv~~~~~g---------~~~lR~~p~~~~t~~~i~~ 384 (397)
T TIGR03246 321 RYNVFSEIRGKGLLIGAVLTEA------YQGKAKQFVNAAA-EEGVIALIAG---------PNVVRFAPSLVISDDDIDE 384 (397)
T ss_pred cCCCeEeeecCceEEEEEEcCc------hhhHHHHHHHHHH-HCCeEEeecC---------CCEEEEeCCCCCCHHHHHH
Confidence 122211 23456667666321 0123456777655 4599987632 1359999999999999999
Q ss_pred HHHHHHHHHHHH
Q 013461 426 ACESLKRISAVV 437 (442)
Q Consensus 426 ~i~~l~~~~~~~ 437 (442)
++++|++++.++
T Consensus 385 ~~~~l~~~l~~~ 396 (397)
T TIGR03246 385 GLARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 26
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.97 E-value=3e-29 Score=254.73 Aligned_cols=321 Identities=16% Similarity=0.183 Sum_probs=228.3
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
.|.++++++|.|+| +|||+||||.+ +.++|. +||+|++|+.+++++++..+. ...++.+.+.+|+++|++.+
T Consensus 71 ~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh-~hp~v~~Av~~ql~~~~~~~~---~~~~~~~~~~~lae~L~~~~ 146 (504)
T PLN02760 71 EPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGG-SEPRLVAAATEQLNKLPFYHS---FWNRTTKPSLDLAKELLEMF 146 (504)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCC-CCHHHHHHHHHHHhhccceec---ccccCcHHHHHHHHHHHhhc
Confidence 47889999999999 59999999966 466774 589999999999998654321 22356788999999999885
Q ss_pred C---CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCeEE------------Eec--
Q 013461 168 G---TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRSTVV------------YFK-- 221 (442)
Q Consensus 168 g---~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~v~------------~~~-- 221 (442)
. .+.+++++||++|+++|++... ++.++|.++..+|+.+..++.+++.... ..+
T Consensus 147 ~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p 226 (504)
T PLN02760 147 TARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP 226 (504)
T ss_pred CCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC
Confidence 3 3568899999999999998652 3567899999999999888887764211 111
Q ss_pred C--------CC--------HHHHHHHHHhhccc-ccc---------------------------------------cccc
Q 013461 222 H--------ND--------MDSLRNTLERVTAD-NKR---------------------------------------SNSF 245 (442)
Q Consensus 222 ~--------~d--------~~~Le~~l~~~~~~-~~~---------------------------------------a~~~ 245 (442)
+ .+ .++|++++....+. ... ..||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGf 306 (504)
T PLN02760 227 HYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAF 306 (504)
T ss_pred cccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCC
Confidence 1 01 14577766432111 110 3467
Q ss_pred cccccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhh-------CCceeccCCCcHHHHHHH
Q 013461 246 GVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-------SSGYVFSASLPPYLASAA 315 (442)
Q Consensus 246 g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~-------~~~~~~s~s~~p~~aaaa 315 (442)
|++|+ .+..+++|+.|| +.+|+|++|. +.|.+++++++++.+... .++++| +.+|+.|+++
T Consensus 307 GRtG~--~~a~e~~gv~PD-----ivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~--~gnPl~~Aaa 377 (504)
T PLN02760 307 GRLGT--MFGCDKYNIKPD-----LVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTY--SGHPVSCAVA 377 (504)
T ss_pred cccch--hhHHHhcCCCCc-----EEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCC--CCCHHHHHHH
Confidence 77765 244688999885 5669999974 346688999999988642 123334 4589999999
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCch---hhHHHHHHHHHHHHHhCC
Q 013461 316 ITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMK---NDLQLLEDIADWALKEDG 390 (442)
Q Consensus 316 ~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~---~~~~~~~~i~~~~L~~~G 390 (442)
+++|++++++ ++.++++++.++|++.|+++....+.. ...+.++.+.+.++....+ .+......+.+.++ ++|
T Consensus 378 la~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~G 455 (504)
T PLN02760 378 LEALKIYKER-NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRG 455 (504)
T ss_pred HHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCC
Confidence 9999999875 589999999999999997752222211 1245677777744221111 11223456777655 469
Q ss_pred EEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 391 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 391 V~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
|++.+.. ..+|++++..+|++|||++++++++++.++
T Consensus 456 vl~~~~g----------~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 456 MLVRVAG----------DNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred cEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9987532 239999999999999999999999998765
No 27
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.97 E-value=7.3e-29 Score=248.07 Aligned_cols=315 Identities=17% Similarity=0.206 Sum_probs=229.4
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
|.++++++|.|+| .||++||||.+ ++++|+. ||+|++|+.+++.++..... ....+.+.+++++|+++.+
T Consensus 22 ~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~ 95 (406)
T PRK12381 22 PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGN-----GYTNEPVLRLAKKLIDATF 95 (406)
T ss_pred CceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccC-----ccCCHHHHHHHHHHHhhCC
Confidence 5678999999999 59999999977 4788887 99999999999987532211 1246778999999999988
Q ss_pred CCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHHH
Q 013461 169 TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDS 227 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~~ 227 (442)
.+++++++||++|++.+++.. .++.++|.++..+|+.+..++.+++. .+..+++||+++
T Consensus 96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 175 (406)
T PRK12381 96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNS 175 (406)
T ss_pred CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHH
Confidence 899999999999999999764 24566888999999998877776653 246678899999
Q ss_pred HHHHHHhhcccc--------------cc---------------------cccccccccCCCcc-ccccCCCCCceeEEEE
Q 013461 228 LRNTLERVTADN--------------KR---------------------SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTA 271 (442)
Q Consensus 228 Le~~l~~~~~~~--------------~~---------------------a~~~g~~G~~g~g~-~~~~~v~~~~~diii~ 271 (442)
+++.++...... .. .| .| +|++|.+. .+++++.|| +.
T Consensus 176 l~~~l~~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG-~gr~G~~~~~~~~~v~pD-----i~ 248 (406)
T PRK12381 176 ASALIDDQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TG-VGRTGELYAYMHYGVTPD-----VL 248 (406)
T ss_pred HHHhccCCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hC-CCCCcchhhhHhhCCCCC-----EE
Confidence 998885311100 00 22 22 24455443 357788764 45
Q ss_pred eccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC-C
Q 013461 272 AMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH-G 348 (442)
Q Consensus 272 S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~-g 348 (442)
||||++|. +.|++++++++++.+.......+| +.+|+.++++.++|+.+++ ++++++++++++++.+.|+++. .
T Consensus 249 t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~--~~~pl~~aaa~a~l~~l~~-~~~~~~~~~~~~~l~~~L~~l~~~ 325 (406)
T PRK12381 249 TTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTY--GGNPLASAVAGKVLELINT-PEMLNGVKQRHDWFVERLNTINAR 325 (406)
T ss_pred EehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 89999972 237789999999988654333333 4589999999999998864 4589999999999999998751 1
Q ss_pred ceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHH
Q 013461 349 LSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKA 426 (442)
Q Consensus 349 ~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~ 426 (442)
+.+.. ...+.++++.+..+. ......+.+. +.++||++.+.. ++.+|++++..+|++||+++
T Consensus 326 ~~~~~~vrg~Gl~~~~~l~~~~------~~~~~~~~~~-l~~~Gv~v~~~g---------~~~lRl~p~~~~t~~~i~~~ 389 (406)
T PRK12381 326 YGLFSEIRGLGLLIGCVLNAEY------AGKAKQISQE-AAKAGVMVLIAG---------PNVVRFAPALNISEEEITTG 389 (406)
T ss_pred CCCEEEEecCeEEEEEEecCch------hhHHHHHHHH-HHHCCcEEeeCC---------CCEEEEeCCccCCHHHHHHH
Confidence 22211 123556666663210 1123456665 455699987532 24599999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 013461 427 CESLKRISAVVLR 439 (442)
Q Consensus 427 i~~l~~~~~~~~~ 439 (442)
+++|++++.++.+
T Consensus 390 ~~~l~~~l~~~~~ 402 (406)
T PRK12381 390 LDRFARACERFVS 402 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987643
No 28
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.97 E-value=2.7e-28 Score=234.13 Aligned_cols=324 Identities=18% Similarity=0.268 Sum_probs=239.6
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEe-ecCCCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNF-ASANYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~-~s~~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|+++++++|.|+| +||++|||| .++..+-++ .||.|++|+++++++ |...+. .++...++.+.|.+.++
T Consensus 35 ~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~-G~~fg~------Pte~Ei~~Aell~~~~p 107 (432)
T COG0001 35 YPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER-GLSFGA------PTELEVELAELLIERVP 107 (432)
T ss_pred CCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh-cCCCCC------CCHHHHHHHHHHHHhcC
Confidence 58889999999999 699999999 566666666 479999999999988 543332 34677788999999998
Q ss_pred C-CcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhc--C-----------------CeEEEecCCCH
Q 013461 169 T-PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLS--R-----------------STVVYFKHNDM 225 (442)
Q Consensus 169 ~-e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~--g-----------------~~v~~~~~~d~ 225 (442)
. |.+-+++||++|+++||+ ++++|..+|.++..||++.-..+.-. | ..++.+++||+
T Consensus 108 ~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~ 187 (432)
T COG0001 108 SIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDL 187 (432)
T ss_pred cccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCH
Confidence 6 999999999999999994 68999999999999998754433221 1 13677889999
Q ss_pred HHHHHHHHhhcccccc--------------------------ccccccc--------cc--CCCccccccCCCCCceeEE
Q 013461 226 DSLRNTLERVTADNKR--------------------------SNSFGVL--------GR--SGRGLTEHCGVPVDKIDIV 269 (442)
Q Consensus 226 ~~Le~~l~~~~~~~~~--------------------------a~~~g~~--------G~--~g~g~~~~~~v~~~~~dii 269 (442)
+.+++++++..++... ++..|.+ |- .-.|..++||+.||
T Consensus 188 ~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD----- 262 (432)
T COG0001 188 EALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD----- 262 (432)
T ss_pred HHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----
Confidence 9999999987544321 2222211 11 12467789999997
Q ss_pred EEecccccc--CCCcEEEcCHHhHHHHHhhCCceecc-CCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC
Q 013461 270 TAAMGHALA--TEGGFCTGSARVVDHQRLSSSGYVFS-ASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI 346 (442)
Q Consensus 270 i~S~sK~lg--~~GG~v~g~~~~i~~l~~~~~~~~~s-~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~ 346 (442)
+.||+|.+| .+-|.+.|++++++++...+..|.-+ .+.+|++++|+.++++.+++.+...+++.++.++|++.|++.
T Consensus 263 lttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~ 342 (432)
T COG0001 263 LTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAA 342 (432)
T ss_pred hhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 667999997 23467889999999887765443322 255899999999999999876557899999999999998764
Q ss_pred ---CCceeecCCCCCEEEEEecCCC-CCch----hhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCC
Q 013461 347 ---HGLSIASNPESPIVFLILEKST-GSMK----NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH 418 (442)
Q Consensus 347 ---~g~~~~~~~~~~i~~~~~~~~~-~~~~----~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~ 418 (442)
.|++......+.++.+.+.... .+.. .+.....++...+|+ +||++.|..+. ...++..|
T Consensus 343 ~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~-~GV~l~ps~~e-----------a~flS~ah 410 (432)
T COG0001 343 AERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLN-RGVYLAPSQFE-----------AGFLSTAH 410 (432)
T ss_pred HHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHh-CCcccCCcccc-----------ceeeeccc
Confidence 3565544456667777775521 1111 122345566665554 59999887653 23566779
Q ss_pred CHHHHHHHHHHHHHHHHHHhh
Q 013461 419 SEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 419 t~eei~~~i~~l~~~~~~~~~ 439 (442)
|++|||+.+++++++++++..
T Consensus 411 te~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 411 TEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred CHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999998887653
No 29
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.97 E-value=2.9e-28 Score=243.86 Aligned_cols=316 Identities=18% Similarity=0.206 Sum_probs=228.3
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
.|.++.+++|+++| +||++||||.|+ ++||+ +||+|.+++.++++++.... . ..+.+.+.+++++|+++.
T Consensus 22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~----~-~~~~~~~~~l~~~l~~~~ 95 (403)
T PRK05093 22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHIS----N-VFTNEPALRLAKKLIDAT 95 (403)
T ss_pred CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCccc----C-ccCCHHHHHHHHHHHhhC
Confidence 35788999999999 599999999775 78998 79999999999998853211 1 234677889999999998
Q ss_pred CCCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcC------------CeEEEecCCCHH
Q 013461 168 GTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMD 226 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g------------~~v~~~~~~d~~ 226 (442)
+.+++++++||++|+..+++.. .++.++|.++..+|+.+..++.+.+ .++..+++||++
T Consensus 96 ~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 175 (403)
T PRK05093 96 FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLA 175 (403)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHH
Confidence 8889999999999999999754 3567789999999998876555422 346778899999
Q ss_pred HHHHHHHhhcccc-------------cc------------cccccc--------cccCCCcc-ccccCCCCCceeEEEEe
Q 013461 227 SLRNTLERVTADN-------------KR------------SNSFGV--------LGRSGRGL-TEHCGVPVDKIDIVTAA 272 (442)
Q Consensus 227 ~Le~~l~~~~~~~-------------~~------------a~~~g~--------~G~~g~g~-~~~~~v~~~~~diii~S 272 (442)
++++.+....... .. .|++-+ +|.+|.+. .+++++.|+ +.|
T Consensus 176 ~l~~~l~~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd-----i~s 250 (403)
T PRK05093 176 AVKAVIDDHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD-----ILT 250 (403)
T ss_pred HHHHHhcCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC-----EEE
Confidence 9998875321100 00 111111 24444433 246677664 568
Q ss_pred ccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC-Cc
Q 013461 273 MGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH-GL 349 (442)
Q Consensus 273 ~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~-g~ 349 (442)
|||+++. +.|++++++++++.+.......+ .+.+|+.++++.++|+.+++ +++.++++++++++.+.|+++. .+
T Consensus 251 ~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t--~~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~ 327 (403)
T PRK05093 251 SAKALGGGFPIGAMLTTAEIASHFKVGTHGST--YGGNPLACAVAEAVFDIINT-PEVLEGVKARRQRFVDGLQKINQKY 327 (403)
T ss_pred ecccccCCcceEEEEEcHHHHhhcCCCCCCCC--CCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999973 24889999999998864333333 34588888899999988854 4578999999999999998751 11
Q ss_pred ee--ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHH
Q 013461 350 SI--ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKAC 427 (442)
Q Consensus 350 ~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i 427 (442)
.+ .....+.++++.+.... .....++++.+++ +||++.+.. ++.+|++++..+|++||++++
T Consensus 328 ~~~~~~~~~G~~~~~~l~~~~------~~~~~~~~~~l~~-~Gv~v~~~g---------~~~lRl~~~~~~~~~~i~~~~ 391 (403)
T PRK05093 328 GVFSEIRGMGLLIGAELKPQY------KGRARDFLNAAAE-EGVMVLVAG---------PDVLRFAPSLVIEEADIDEGL 391 (403)
T ss_pred CCeEeEeeCceEEEEEecCcc------hhHHHHHHHHHHH-CCeEEecCC---------CCEEEEeCCCCCCHHHHHHHH
Confidence 11 11234667777764210 1124577877665 599988632 134999999999999999999
Q ss_pred HHHHHHHHHH
Q 013461 428 ESLKRISAVV 437 (442)
Q Consensus 428 ~~l~~~~~~~ 437 (442)
++|++++.++
T Consensus 392 ~~l~~~l~~~ 401 (403)
T PRK05093 392 ARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 30
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.97 E-value=2.9e-28 Score=243.25 Aligned_cols=308 Identities=19% Similarity=0.219 Sum_probs=221.7
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|.++++++|.|+| .||++||||.++ ....++ +||+|++|+.+++++++..+. . ...+.+.+|+++|+++.+.
T Consensus 23 p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~~~ 97 (396)
T PRK04073 23 PIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR---A--FHSDQLGPWYEKVAKLTGK 97 (396)
T ss_pred CceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc---c--cCCHHHHHHHHHHHhcCCC
Confidence 5678999999999 599999999654 334444 489999999999998765432 1 2467889999999999998
Q ss_pred CcEEEEcchHHHHHhhhhhh-----------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCCCHH
Q 013461 170 PDSILYSYGLSTMFSAIPCF-----------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMD 226 (442)
Q Consensus 170 e~~i~~~sG~~a~~~ai~a~-----------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d~~ 226 (442)
+++++++||++|++.|++.. .++.++|.++..+|+.+..++.+++.. +..++++|++
T Consensus 98 ~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 177 (396)
T PRK04073 98 DMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLE 177 (396)
T ss_pred CeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHH
Confidence 99999999999999999865 245568889999999988877766522 3567788999
Q ss_pred HHHHHHHhhcccc-------------cc------------cccccc--------cccCCCcc-ccccCCCCCceeEEEEe
Q 013461 227 SLRNTLERVTADN-------------KR------------SNSFGV--------LGRSGRGL-TEHCGVPVDKIDIVTAA 272 (442)
Q Consensus 227 ~Le~~l~~~~~~~-------------~~------------a~~~g~--------~G~~g~g~-~~~~~v~~~~~diii~S 272 (442)
++++.+....... .. .|+.-+ +|++|... .+++++.| |++ +
T Consensus 178 ~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~p---di~--~ 252 (396)
T PRK04073 178 ALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTP---DMY--I 252 (396)
T ss_pred HHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCC---CEE--E
Confidence 9888775321100 00 111111 24444333 24566655 444 5
Q ss_pred ccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC--C
Q 013461 273 MGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI--H 347 (442)
Q Consensus 273 ~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~--~ 347 (442)
|||++|++| |++++++++++.+........| +.+|+.+++++++|+.+++. .+.++.+++++++.+.|+++ +
T Consensus 253 ~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~--~~~~~~~aaa~aaL~~~~~~-~l~~~~~~~~~~l~~~L~~l~~~ 329 (396)
T PRK04073 253 LGKALGGGVFPISCVAANRDILGVFTPGSHGSTF--GGNPLACAVSIAALEVLEEE-KLPERSLELGEYFKEQLKEIDNP 329 (396)
T ss_pred ecccccCCCCcceEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhhcCC
Confidence 999998653 8999999999988643333333 45899999999999988653 47788899999999999876 1
Q ss_pred CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHH
Q 013461 348 GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKAC 427 (442)
Q Consensus 348 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i 427 (442)
.+... .+.+.++.+.+.. ...+++++++ ++||++.+.. +..||++++..+|++|+++++
T Consensus 330 ~i~~~-~~~g~~~~~~~~~----------~~~~~~~~l~-~~Gv~~~~~~---------~~~iRi~p~l~~t~e~i~~~~ 388 (396)
T PRK04073 330 MIKEV-RGRGLFIGVELNE----------PARPYCEALK-EEGLLCKETH---------ETVIRFAPPLVITKEELDWAF 388 (396)
T ss_pred cccce-ecceEEEEEEecc----------hHHHHHHHHH-HCCeEEecCC---------CCEEEEECCcccCHHHHHHHH
Confidence 22221 2356777777631 1236777644 5699987532 134999999999999999999
Q ss_pred HHHHHHH
Q 013461 428 ESLKRIS 434 (442)
Q Consensus 428 ~~l~~~~ 434 (442)
++|++++
T Consensus 389 ~~l~~~l 395 (396)
T PRK04073 389 EKIKAVL 395 (396)
T ss_pred HHHHHHh
Confidence 9998865
No 31
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.97 E-value=3.5e-28 Score=245.06 Aligned_cols=322 Identities=17% Similarity=0.210 Sum_probs=226.3
Q ss_pred CeeecCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 94 PVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 94 ~~~~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
.++++++|.++| +||++||||.++ ..+|+ +||+|.+|+.+++++++.++.+. -+.+.+.+|+++|+++++
T Consensus 27 ~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~q~~~~~~~~~~~----~~~~~~~~la~~L~~~~~~ 101 (433)
T PRK08117 27 LPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGH-RHPKVVQAIKEQADKLMHGPSGV----IYYESILKLAEELAEITPG 101 (433)
T ss_pred ceEEeeeeeEEEeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccCccccc----cCCHHHHHHHHHHHHhCCC
Confidence 688999999999 699999999664 34554 58999999999999876544221 146888999999999983
Q ss_pred -CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecC---------
Q 013461 169 -TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKH--------- 222 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~--------- 222 (442)
.+.+++++||++|++.|++. +.++.++|.++..+|+.+..++.+++.. +..++.
T Consensus 102 ~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (433)
T PRK08117 102 GLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKG 181 (433)
T ss_pred CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcccccccc
Confidence 45667779999999999975 5678889999999999988876554321 111211
Q ss_pred --------CCHHHHHHHHHhh--cccccc--------------------------------------cccccccccCCCc
Q 013461 223 --------NDMDSLRNTLERV--TADNKR--------------------------------------SNSFGVLGRSGRG 254 (442)
Q Consensus 223 --------~d~~~Le~~l~~~--~~~~~~--------------------------------------a~~~g~~G~~g~g 254 (442)
+|++++++++++. ...... .|. | +|++|.+
T Consensus 182 ~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G-~gr~G~~ 259 (433)
T PRK08117 182 EDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-G-FGRTGEW 259 (433)
T ss_pred CchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-c-cCccccc
Confidence 2456777777642 111100 222 3 4666766
Q ss_pred cc-cccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHH
Q 013461 255 LT-EHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITK 331 (442)
Q Consensus 255 ~~-~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~ 331 (442)
.. +++|+.|| +.||||++|. +.|++++++++++.+......++| +.+|+.+++++++|+.+++. +++++
T Consensus 260 ~~~~~~gv~pD-----i~t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~--~~np~~~aaa~a~L~~l~~~-~l~~~ 331 (433)
T PRK08117 260 FAAQTFGVVPD-----IMTIAKGIASGLPLSAVVASKELMEQWPLGSHGTTF--GGNPVACAAALATLEVIKEE-KLLDN 331 (433)
T ss_pred hhHhhcCCCCC-----EeehhhhccCCCcceeEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHhc-cHHHH
Confidence 53 77888774 4689999973 247899999999887544333333 45899999999999998754 58899
Q ss_pred HHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 332 LKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 332 l~~~~~~l~~~L~~~~-g~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
++++++++++.|.++. .+.+. ....+-++.+.+..+.+. ++......+.+.++ ++||++.+.... ..
T Consensus 332 ~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~--~~~~~~~~~~~~l~-~~Gv~~~~~g~~-------~~ 401 (433)
T PRK08117 332 ANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGE--PDGDAVEKILDKCL-EKGLLFYLCGNA-------GN 401 (433)
T ss_pred HHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCC--cchHHHHHHHHHHH-HCCCEEeecCCC-------CC
Confidence 9999999999887651 12211 122345667777543211 12233456676555 569988753221 24
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
.+|++++..+|++||++++++|+++++++.+|
T Consensus 402 ~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~ 433 (433)
T PRK08117 402 VLRMIPPLTVTKEEIDEGLDILDEALTEYEAK 433 (433)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 59999999999999999999999999887543
No 32
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=1.4e-28 Score=244.22 Aligned_cols=311 Identities=17% Similarity=0.211 Sum_probs=221.1
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
+.++++++|.++| .||++||||.| ++++|+. ||+|.+++.+++++...++ ..+ ..+...+|.+++++..+
T Consensus 19 ~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~~~---~~~--~~~~~~~la~~l~~~~~ 92 (395)
T PRK03715 19 DIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLINPS---PAF--YNEPMAKLAGLLTQHSC 92 (395)
T ss_pred CceEEeeecCEEEECCCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhccccc---ccc--cCHHHHHHHHHHhhccC
Confidence 5678899999999 59999999975 5778887 7999999999998854322 111 24566677777777666
Q ss_pred CCcEEEEcchHHHHHhhhhhhc--------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCCCHHHH
Q 013461 169 TPDSILYSYGLSTMFSAIPCFC--------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMDSL 228 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~~--------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d~~~L 228 (442)
.+++++++||++|++.|++... ++.++|.++..+|+++..++.+++.. +...+++|++++
T Consensus 93 ~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l 172 (395)
T PRK03715 93 FDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASV 172 (395)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHH
Confidence 7889999999999999998664 45678999999999999998887643 122345788888
Q ss_pred HHHHHhhcccc-------------c-c---------------------cccccccccCCCcc-ccccCCCCCceeEEEEe
Q 013461 229 RNTLERVTADN-------------K-R---------------------SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAA 272 (442)
Q Consensus 229 e~~l~~~~~~~-------------~-~---------------------a~~~g~~G~~g~g~-~~~~~v~~~~~diii~S 272 (442)
++.++...... . . .+. | +|++|.+. .+++++.|| | .|
T Consensus 173 ~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~GRtG~~~a~~~~gv~PD---i--~t 245 (395)
T PRK03715 173 EKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G-CGRTGTLFAYELSGIEPD---I--MT 245 (395)
T ss_pred HHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCcchhhHhhcCCCCc---e--ee
Confidence 88775311000 0 0 222 3 46777765 588999874 4 57
Q ss_pred ccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC---C
Q 013461 273 MGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI---H 347 (442)
Q Consensus 273 ~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~---~ 347 (442)
|+|++|. +.|.+++++++.... ......+| +.+|+.+++++++|+++++ ++++++++++.++|++.|+++ .
T Consensus 246 ~gK~lg~G~p~~av~~~~~i~~~~-~~~~~~T~--~g~pl~~aaala~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~ 321 (395)
T PRK03715 246 LGKGIGGGVPLAALLAKAEVAVFE-AGDQGGTY--NGNPLMTAVGVAVISQLLA-PGFLEGVRARGEYLKEKLLELSEER 321 (395)
T ss_pred ehhhhhCCcceEEEEEcccccccc-CCCcCCCC--CCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999974 357778888876322 11112222 4589999999999999975 558999999999999999764 1
Q ss_pred CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHH
Q 013461 348 GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKAC 427 (442)
Q Consensus 348 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i 427 (442)
++... ...+.++.+.+..+ ......+.+.+ +.++||++.+..+ +.||++++..+|++||++++
T Consensus 322 ~i~~v-rG~Glm~~i~l~~~------~~~~~~~~~~~-~~~~Gi~~~~~~~---------~~lR~~p~l~~t~~ei~~~~ 384 (395)
T PRK03715 322 GLEGE-RGEGLLRALLLGKD------IGPQIVEKARD-MQPDGLLLNAPRP---------NLLRFMPALNVTTEEIDQMI 384 (395)
T ss_pred CcCeE-EcceeEEEEEecCc------hHHHHHHHHHh-ccCCCEEEeecCC---------CEEEEeCCcccCHHHHHHHH
Confidence 33322 23678888888431 11122233332 2234999865432 45999999999999999999
Q ss_pred HHHHHHHHHH
Q 013461 428 ESLKRISAVV 437 (442)
Q Consensus 428 ~~l~~~~~~~ 437 (442)
++|+++++++
T Consensus 385 ~~l~~~l~~~ 394 (395)
T PRK03715 385 AMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHhh
Confidence 9999988764
No 33
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.97 E-value=2.2e-28 Score=237.63 Aligned_cols=323 Identities=17% Similarity=0.198 Sum_probs=230.3
Q ss_pred CCeeecCCCCeEEE-CCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTII-SGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~~-~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
+.++++++|.|++. |||+|||..|. +..+++ ++|++.+|+.+|+++...... +..+.....+|.++|+++.+
T Consensus 27 ~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~----~~~t~~Pa~~LA~~L~~~aP~ 102 (449)
T COG0161 27 PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF----GGFTHEPAIELAEKLAELAPE 102 (449)
T ss_pred ceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh----cccCCchHHHHHHHHHHhCCC
Confidence 78899999999995 99999998554 434444 579999999999999544321 11234448999999999998
Q ss_pred --CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe-------------EEE--ecC
Q 013461 169 --TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST-------------VVY--FKH 222 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~--~~~ 222 (442)
.+++++.+||++|++.|++... +|..+|....+||+.+..++.+.|.. +.. .|+
T Consensus 103 ~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~ 182 (449)
T COG0161 103 GGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPY 182 (449)
T ss_pred CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCc
Confidence 5788999999999999996432 23347788999999999998887721 101 111
Q ss_pred ----C-----C------HHHHHHHHHhhcccccc-----------------------------------------ccccc
Q 013461 223 ----N-----D------MDSLRNTLERVTADNKR-----------------------------------------SNSFG 246 (442)
Q Consensus 223 ----~-----d------~~~Le~~l~~~~~~~~~-----------------------------------------a~~~g 246 (442)
+ + .+.||+++.+..++... ..+||
T Consensus 183 ~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFG 262 (449)
T COG0161 183 AYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFG 262 (449)
T ss_pred ccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCC
Confidence 1 1 34677777776533211 66666
Q ss_pred ccccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhh-C----CceeccCCCcHHHHHHHHHH
Q 013461 247 VLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-S----SGYVFSASLPPYLASAAITA 318 (442)
Q Consensus 247 ~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~-~----~~~~~s~s~~p~~aaaa~aa 318 (442)
++|+ ...++++|+.|| +.+++|++++ +-|.++.++++.+.+... . ++++| +.+|++||+|++.
T Consensus 263 RTG~--~FA~e~~gi~PD-----i~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TY--sghPlacAaAla~ 333 (449)
T COG0161 263 RTGK--MFACEHAGIVPD-----ILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTY--SGNPLACAAALAN 333 (449)
T ss_pred cCch--hhhhhhcCCCCC-----eeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCcc--ccCHHHHHHHHHH
Confidence 6654 466899999985 4459999962 124467788888887654 2 33334 4599999999999
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHhhcc-CCCceeecC--CCCCEEEEEecCCCCCch-hhHHHHHHHHHHHHHhCCEEEe
Q 013461 319 IDVLEENPDLITKLKKNTAILRTGLSD-IHGLSIASN--PESPIVFLILEKSTGSMK-NDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 319 l~~l~~~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~--~~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
|+++++++ ++++.++...+|.+.|.+ +++.+.+++ ..+-+..+.+..+..+.. -+.....++.+.++ ++|++++
T Consensus 334 L~i~e~e~-l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~-e~Gl~iR 411 (449)
T COG0161 334 LDILEEED-LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAAL-ERGLLIR 411 (449)
T ss_pred HHHHHhcC-HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHH-HCCeEEe
Confidence 99998754 899999999999999987 433333322 235566666654433221 12233456666554 5699999
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
|... .+-++++..+|++||+++++++++++++....
T Consensus 412 p~g~----------~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 412 PLGD----------VIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred ecCC----------EEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 8732 38899999999999999999999999887654
No 34
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.97 E-value=7.1e-28 Score=240.96 Aligned_cols=311 Identities=24% Similarity=0.306 Sum_probs=224.9
Q ss_pred CCeeecCCCCeEEE-CCeeEEEeecCCCCCCC---CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTII-SGKEVVNFASANYLGLI---GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~~-~G~~~id~~s~~~l~~~---~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
|+++.+++|.++|. ||+++|||+|+ |+++. .||+|++|+.+++++++..+ +.+ ..+.+.+++++|++++|
T Consensus 20 ~~~~~~~~g~~~~~~~g~~~lD~~s~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~l~~~l~~~~~ 93 (401)
T TIGR01885 20 PVVFSKAEGVHVWDVEGKRYLDFLSA-YSAVNQGHCHPKIVKALTEQAQKLTLSS---RAF--YNDVFGEFAEYVTKLFG 93 (401)
T ss_pred CceEEeeecCEEEeCCCCEEEEcccC-HhhccCCCCCHHHHHHHHHHHHhccccc---ccc--CCHHHHHHHHHHHhhcC
Confidence 56778999999994 99999999884 65554 48999999999999876433 222 46889999999999999
Q ss_pred CCcEEEEcchHHHHHhhhhhhc----------cCCCEEE-eCCCchHHHHHHHHhcC------------CeEEEecCCCH
Q 013461 169 TPDSILYSYGLSTMFSAIPCFC----------KKGDLIV-ADEGVHWGIQNGLYLSR------------STVVYFKHNDM 225 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~~----------~~gd~Vi-~~~~~h~s~~~~~~l~g------------~~v~~~~~~d~ 225 (442)
.+++++++||++|++.+++... ...+.|+ ....+|+++..++.+++ ..+..++|+|+
T Consensus 94 ~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (401)
T TIGR01885 94 YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNL 173 (401)
T ss_pred CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCH
Confidence 9999999999999999998642 1234454 45566888888888764 24577889999
Q ss_pred HHHHHHHHhhcccccc----------------------------ccc---------ccccccCCCccc-cccCCCCCcee
Q 013461 226 DSLRNTLERVTADNKR----------------------------SNS---------FGVLGRSGRGLT-EHCGVPVDKID 267 (442)
Q Consensus 226 ~~Le~~l~~~~~~~~~----------------------------a~~---------~g~~G~~g~g~~-~~~~v~~~~~d 267 (442)
+++|++++...+.... .|+ .| +|++|.+.+ +++++.| |
T Consensus 174 ~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g-~g~~G~~~~~~~~~~~~---d 249 (401)
T TIGR01885 174 EALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG-LGRTGKLLCVDHENVKP---D 249 (401)
T ss_pred HHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC-CCccchhhHHhhcCCCC---C
Confidence 9999988643221100 111 22 455666543 4566655 4
Q ss_pred EEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhc
Q 013461 268 IVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 344 (442)
Q Consensus 268 iii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~ 344 (442)
++ ++||+++.++ |++++++++++.++.....++|+ .+|+.++++.++|+.+++. .+.++++++++++++.|+
T Consensus 250 i~--~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~--~~p~~~~aa~a~L~~i~~~-~l~~~~~~~~~~~~~~L~ 324 (401)
T TIGR01885 250 IV--LLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYG--GNPLACAVAVAALEVLEEE-KLAENAEKLGEIFRDQLK 324 (401)
T ss_pred EE--EeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHH
Confidence 54 5889997432 56889999999886543443443 4788899999999998764 477899999999999998
Q ss_pred cCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHH
Q 013461 345 DIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 422 (442)
Q Consensus 345 ~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~ee 422 (442)
++ +..+.. .+.++++.+.+..+.. .....++++.+. ++||++.+.. +..+||+++..+|++|
T Consensus 325 ~l-~~~~~~~~~g~g~~~~i~~~~~~~-----~~~~~~l~~~l~-~~Gv~v~~~~---------~~~lRi~p~l~~t~~~ 388 (401)
T TIGR01885 325 KL-PKPIITEVRGRGLLNAIVIDESKT-----GRTAWDLCLKLK-EKGLLAKPTH---------GNIIRLAPPLVITEEQ 388 (401)
T ss_pred hc-cCCceeEEeecCeeEEEEeccCcc-----hhHHHHHHHHHH-hCCEEEEecC---------CCEEEEeCCccCCHHH
Confidence 87 333321 2356777777743210 123457777654 5699997642 2359999999999999
Q ss_pred HHHHHHHHHHHH
Q 013461 423 LVKACESLKRIS 434 (442)
Q Consensus 423 i~~~i~~l~~~~ 434 (442)
|++++++|++++
T Consensus 389 i~~~l~~l~~~l 400 (401)
T TIGR01885 389 LDEGLEIIKKVI 400 (401)
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
No 35
>PRK12403 putative aminotransferase; Provisional
Probab=99.96 E-value=2.6e-27 Score=239.23 Aligned_cols=325 Identities=16% Similarity=0.187 Sum_probs=221.5
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
|.++++++|.|+| .||++||||.++ ..+|+ +||+|++|+++++++++..+ ..+.++.+.+.+|+++|+++++
T Consensus 37 p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~---~~~~~~~~~~~~lae~L~~~~p 112 (460)
T PRK12403 37 PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYN---MFFHTTHPAVIELSELLFSLLP 112 (460)
T ss_pred CceEEeceeeEEEeCCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCee---cccccCCHHHHHHHHHHHHhCC
Confidence 6789999999999 599999999554 23666 58999999999999976532 2234567899999999999987
Q ss_pred --CCcEEEEcchHHHHHhhhhhhc------c-CCC--EEEeCCCchHHHHHHHHhcCCe-----------EEEecCC---
Q 013461 169 --TPDSILYSYGLSTMFSAIPCFC------K-KGD--LIVADEGVHWGIQNGLYLSRST-----------VVYFKHN--- 223 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~~------~-~gd--~Vi~~~~~h~s~~~~~~l~g~~-----------v~~~~~~--- 223 (442)
.+++++++||++|+++|++... + +++ +|.....+|+.+..++.+++.. +..++..
T Consensus 113 ~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~ 192 (460)
T PRK12403 113 GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWY 192 (460)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCccc
Confidence 5789999999999999997653 2 333 3345678999999888877643 1122111
Q ss_pred ----C----------HHHHHHHHHhhc-ccccc----------------------------cccc--------cccccCC
Q 013461 224 ----D----------MDSLRNTLERVT-ADNKR----------------------------SNSF--------GVLGRSG 252 (442)
Q Consensus 224 ----d----------~~~Le~~l~~~~-~~~~~----------------------------a~~~--------g~~G~~g 252 (442)
+ ++++++.+.+.. +.... .|+. .-+|++|
T Consensus 193 ~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG 272 (460)
T PRK12403 193 ANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG 272 (460)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc
Confidence 1 245655554322 11100 1111 1135666
Q ss_pred Ccc-ccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCCcee--ccCCCcHHHHHHHHHHHHHHhcCh
Q 013461 253 RGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYV--FSASLPPYLASAAITAIDVLEENP 326 (442)
Q Consensus 253 ~g~-~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~~~--~s~s~~p~~aaaa~aal~~l~~~~ 326 (442)
.+. .+++|+.| ||+ +|+|++|. +-|.+++++++++.+......+. .+.+.+|+.|++++++|+++++.+
T Consensus 273 ~~~a~e~~gv~P---Div--~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~ 347 (460)
T PRK12403 273 EWFAHEHFGFEP---DTL--SIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEG 347 (460)
T ss_pred hhhhhhhcCCCC---CeE--EEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 665 48899987 555 49999972 23456688999998764332332 234579999999999999998754
Q ss_pred HHHHHHH-HHHHHHHHhhccC-CCceeec--CCCCCEEEEEecCCCCCchh---hHHHHHHHHHHHHHhCCEEEeeccCc
Q 013461 327 DLITKLK-KNTAILRTGLSDI-HGLSIAS--NPESPIVFLILEKSTGSMKN---DLQLLEDIADWALKEDGVFVVTSKRS 399 (442)
Q Consensus 327 ~~~~~l~-~~~~~l~~~L~~~-~g~~~~~--~~~~~i~~~~~~~~~~~~~~---~~~~~~~i~~~~L~~~GV~v~~~~~~ 399 (442)
+.++++ ++.++|++.|+++ ...++.. ...+.++.+.+..+.....+ .......+...+++ +|+++.+..
T Consensus 348 -l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~~-- 423 (460)
T PRK12403 348 -VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFE-EGVIIRSTL-- 423 (460)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHh-CCEEEEecC--
Confidence 788996 8999999988654 1122211 23566777777432111111 11223345555554 599987431
Q ss_pred ccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 400 MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 400 ~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
..+|++++..+|++|++++++++++++.++.
T Consensus 424 --------~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 424 --------GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred --------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2389999999999999999999999998764
No 36
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.96 E-value=2.1e-28 Score=244.73 Aligned_cols=307 Identities=19% Similarity=0.220 Sum_probs=219.7
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHH-HhcCCCCCccCccccCcHHHHHHHH----HHHhhhCCCcEEE-EcchHHH
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCEA----RIAKFLGTPDSIL-YSYGLST 181 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l-~~~g~~~~~~~~~~g~~~~~~~le~----~lA~~~g~e~~i~-~~sG~~a 181 (442)
++.||+ +|+||+ ||++++++...+ .+||.+++|+|.+.| .+.+.+||+ ++|+++|.+.+++ ++||+.|
T Consensus 28 ~~~~~l~~sen~~----~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A 102 (416)
T PRK13034 28 QDHLELIASENFT----SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQA 102 (416)
T ss_pred hcCeeecccccCC----CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHH
Confidence 356776 899996 899999999995 899999999999988 588999999 9999999999965 5899999
Q ss_pred HHhhhhhhccCCCEEEeCCCchHH-HHHHHHhc--CCeE--EEecC------CCHHHHHHHHHhhcccccc---------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWG-IQNGLYLS--RSTV--VYFKH------NDMDSLRNTLERVTADNKR--------- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s-~~~~~~l~--g~~v--~~~~~------~d~~~Le~~l~~~~~~~~~--------- 241 (442)
+..++.++++|||.|+++...|.+ +..|++.+ +... ..+++ +|++++++.++....+...
T Consensus 103 ~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~~g~~ 182 (416)
T PRK13034 103 NGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSAYPRE 182 (416)
T ss_pred HHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCccccc
Confidence 999999999999999999999988 45555543 2222 35555 6899999988643221000
Q ss_pred ---------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHHhHH-HHHhhC
Q 013461 242 ---------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARVVD-HQRLSS 298 (442)
Q Consensus 242 ---------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~~i~-~l~~~~ 298 (442)
+|++|+++. |. +.+ +.+++|++++|++|++ |..||+++++++.+. .++...
T Consensus 183 ~dl~~l~~la~~~g~~livD~Aha~G~~~~---g~--~~~-~~~~~Di~~~s~~K~l~g~~GG~v~~~~~~~~~~~~~~~ 256 (416)
T PRK13034 183 LDFARFREIADEVGALLMVDMAHIAGLVAA---GE--HPN-PFPHAHVVTTTTHKTLRGPRGGMILTNDEEIAKKINSAV 256 (416)
T ss_pred cCHHHHHHHHHHcCCEEEEeCcccccCccc---CC--CCC-CCCCceEEEEeCcccCCCCCCeEEEECcHHHHHHHHhhc
Confidence 677776652 22 122 1245899999999999 567888877665444 343321
Q ss_pred CceeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEEecCCCCCchhhHH
Q 013461 299 SGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 376 (442)
.....+.+.+|..++++.+.++.++. .++++++++++.++|++.|.+. |+++..+ +++|++.+.++.... +
T Consensus 257 ~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~~----~-- 329 (416)
T PRK13034 257 FPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKGL----S-- 329 (416)
T ss_pred CCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCCC----C--
Confidence 11122334555655555566665533 3457899999999999999987 9887642 578999998854311 1
Q ss_pred HHHHHHHHHHHhCCEEEeeccCccc-ccCCCCCceEEEecC----CCCHHHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSML-DKCRLPVGIRLFVSA----AHSEADLVKACESLKRISA 435 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~-~~~~~~~~iRi~~~~----~~t~eei~~~i~~l~~~~~ 435 (442)
...+.+ .|+++||++.+...|.. .....+++||++++. .+|++|+++++++|++++.
T Consensus 330 -~~~~~~-~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 330 -GKDAEQ-ALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred -HHHHHH-HHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 123334 57777999987432221 001124679999998 8889999999999998875
No 37
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=5.6e-28 Score=241.65 Aligned_cols=309 Identities=22% Similarity=0.319 Sum_probs=226.0
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
|.++++++|.++| +||++||||.+ ++++|. +||++.+++.+++++++..+. .| ..+...++++++++++|
T Consensus 26 ~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~----~~-~~~~~~~la~~l~~~~~ 99 (398)
T PRK03244 26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHVSN----LF-ATEPQIALAERLVELLG 99 (398)
T ss_pred CceEEEeeecEEEECCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccCccC----cc-CCHHHHHHHHHHHHhCC
Confidence 5678999999999 59999999977 467776 489999999999999764322 12 24556899999999988
Q ss_pred C---CcEEEEcchHHHHHhhhhhhccCC--CEEEeCCCchHHHHHHHHhcC------------CeEEEecCCCHHHHHHH
Q 013461 169 T---PDSILYSYGLSTMFSAIPCFCKKG--DLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMDSLRNT 231 (442)
Q Consensus 169 ~---e~~i~~~sG~~a~~~ai~a~~~~g--d~Vi~~~~~h~s~~~~~~l~g------------~~v~~~~~~d~~~Le~~ 231 (442)
. ++++++++|++|+..+++....+| ++|.++..+|+.+..++.+++ .++..++++|++++++.
T Consensus 100 ~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 179 (398)
T PRK03244 100 APEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAA 179 (398)
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHh
Confidence 4 478888999999999998665454 788888899988777665554 23566778899999988
Q ss_pred HHhhcccc-------------c----c------------------cccccccccCCCcc-ccccCCCCCceeEEEEeccc
Q 013461 232 LERVTADN-------------K----R------------------SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGH 275 (442)
Q Consensus 232 l~~~~~~~-------------~----~------------------a~~~g~~G~~g~g~-~~~~~v~~~~~diii~S~sK 275 (442)
+....... . . ++. | +|++|.+. .+++++.|| +.||||
T Consensus 180 ~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g-~gr~g~~~~~~~~~~~pD-----i~t~sK 252 (398)
T PRK03244 180 VDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-G-IGRTGAWFAHQHDGVTPD-----VVTLAK 252 (398)
T ss_pred hcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CcccchHHhhhhhCCCCC-----EEEEch
Confidence 74211000 0 0 221 1 34555543 356777664 457999
Q ss_pred cccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec
Q 013461 276 ALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS 353 (442)
Q Consensus 276 ~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~ 353 (442)
++|. +.|++++++++++.+.......+| +.+|+.++++.++|+.+++. ++.+++++++++|++.|+++ +++...
T Consensus 253 ~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L~~~-~~~~~~ 328 (398)
T PRK03244 253 GLGGGLPIGACLAFGPAADLLTPGLHGSTF--GGNPVACAAALAVLDTIASE-GLLENAERLGEQLRAGIEAL-GHPLVD 328 (398)
T ss_pred hhhCCcccEEEEEcHHHHhhccCCCCcCCC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhc-CCCcee
Confidence 9973 348889999998887643333334 46899999999999988654 47899999999999999886 432211
Q ss_pred --CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 354 --NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 354 --~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
...+.++++.+..+ ...++.++++ ++||++.+.. ++.||++++..+|++||++++++|+
T Consensus 329 ~v~g~g~~~~i~~~~~---------~~~~~~~~l~-~~Gv~~~~~~---------~~~iR~~p~~~~t~~~i~~~~~~l~ 389 (398)
T PRK03244 329 HVRGRGLLLGIVLTAP---------VAKAVEAAAR-EAGFLVNAVA---------PDVIRLAPPLIITDAQVDAFVAALP 389 (398)
T ss_pred eEeeccEEEEEEEecc---------HHHHHHHHHH-HCCeEEeecC---------CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 23577888887421 2346777655 4699998742 2449999999999999999999999
Q ss_pred HHHHHH
Q 013461 432 RISAVV 437 (442)
Q Consensus 432 ~~~~~~ 437 (442)
+++.++
T Consensus 390 ~~l~~~ 395 (398)
T PRK03244 390 AILDAA 395 (398)
T ss_pred HHHHhc
Confidence 998764
No 38
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=1.6e-27 Score=240.01 Aligned_cols=322 Identities=14% Similarity=0.196 Sum_probs=224.9
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|.++++++|+|+| +|||+||||.++ ...+++ +||+|.+|+.++++++...+. .+...+...++.++|++.++.
T Consensus 25 p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~p~ 100 (445)
T PRK08593 25 PLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTP----AYMYHEPLVRLAKKLCELAPG 100 (445)
T ss_pred CceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhCCC
Confidence 6788999999999 599999999554 333344 589999999999998543221 123468889999999998852
Q ss_pred ---CcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecCCC------
Q 013461 170 ---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHND------ 224 (442)
Q Consensus 170 ---e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~~d------ 224 (442)
+++.+++||++|++.|++ .+.+|.++|.++..+|+.+..++.+++.. +..++.+|
T Consensus 101 ~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 180 (445)
T PRK08593 101 DFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMY 180 (445)
T ss_pred CCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccc
Confidence 477888999999999997 45688889999999999988887666521 22233221
Q ss_pred ----H-------HHHHHHHHhh--cccccc---------------------------------------cccccccccCC
Q 013461 225 ----M-------DSLRNTLERV--TADNKR---------------------------------------SNSFGVLGRSG 252 (442)
Q Consensus 225 ----~-------~~Le~~l~~~--~~~~~~---------------------------------------a~~~g~~G~~g 252 (442)
. ++++++++.. .+.... ..++ |++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~---GrtG 257 (445)
T PRK08593 181 EEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGL---GRTG 257 (445)
T ss_pred cCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC---CcCc
Confidence 1 2344444321 111100 2344 4455
Q ss_pred Cc-cccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHH
Q 013461 253 RG-LTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLI 329 (442)
Q Consensus 253 ~g-~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~ 329 (442)
.+ ..+++|+.|| +.||+|++|. ++|++++++++++.+... ...++.+.+|+.+++++++|+.+++. ++.
T Consensus 258 ~~~a~~~~gv~pD-----i~t~gK~l~~G~p~gav~~~~~i~~~~~~~--~~~~T~~~~pl~~aaa~a~l~~l~~~-~l~ 329 (445)
T PRK08593 258 KWSSISHFNITPD-----LMSFGKSLAGGMPMSAIVGRKEIMESLEAP--AHLFTTGANPVSCAAALATIDMIEDE-SLL 329 (445)
T ss_pred hHHHHHhcCCCCC-----EeeecccccCCcccEEEEEcHHHHhhhccC--CCCCCCCCCHHHHHHHHHHHHHHHhc-cHH
Confidence 54 4578899875 4469999973 468899999999988532 34456677999999999999999765 588
Q ss_pred HHHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCC
Q 013461 330 TKLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL 406 (442)
Q Consensus 330 ~~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~ 406 (442)
++++++.++|++.|+++. ..++.. ...+.++.+.+..+......+.....+++..++ ++||++.+...
T Consensus 330 ~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~~~-------- 400 (445)
T PRK08593 330 QRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAVAG-------- 400 (445)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEeccCC--------
Confidence 999999999999997641 122211 224556666664321111123334566777655 46999865422
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 407 PVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 407 ~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+.+|++++..+|++||++++++++++++++..
T Consensus 401 -~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 401 -NVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred -CEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 34999999999999999999999999987654
No 39
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=4.8e-28 Score=240.45 Aligned_cols=305 Identities=17% Similarity=0.240 Sum_probs=222.5
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecCC---CCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASAN---YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
+.++++++|.++| +||++||||.|++ +||+ +||+|++++.++++++...+ . ....+...++++.+++..+
T Consensus 12 ~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~--~~~~~~~~~la~~l~~~~~ 85 (377)
T PRK02936 12 PIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWHVS---N--LFTNSLQEEVASLLAENSA 85 (377)
T ss_pred CceEEEeecCEEEeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccccc---c--ccCCHHHHHHHHHHHhcCC
Confidence 5678999999999 6999999998876 8887 79999999999999853221 1 1346777888888888777
Q ss_pred CCcEEEEcchHHHHHhhhhhh---ccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHHHHHHHHH
Q 013461 169 TPDSILYSYGLSTMFSAIPCF---CKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDSLRNTLE 233 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~---~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~~Le~~l~ 233 (442)
.+.++++++|++|+..+++.. .+++++|..+..+|+++..++.+++. .+..++++|++++++.+.
T Consensus 86 ~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 165 (377)
T PRK02936 86 GDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN 165 (377)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc
Confidence 788999999999999999853 46667889999999998888776653 245678899999998875
Q ss_pred hhcccc------------cc-----------------------cccccccccCCCcc-ccccCCCCCceeEEEEeccccc
Q 013461 234 RVTADN------------KR-----------------------SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHAL 277 (442)
Q Consensus 234 ~~~~~~------------~~-----------------------a~~~g~~G~~g~g~-~~~~~v~~~~~diii~S~sK~l 277 (442)
...... .. .| .| +|.+|.+. .+++++.| |+ .||||++
T Consensus 166 ~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~-~g-~g~~g~~~~~~~~~~~~---di--~t~sK~l 238 (377)
T PRK02936 166 EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQ-TG-IGRTGTLFAYEQFGLDP---DI--VTVAKGL 238 (377)
T ss_pred CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-CCcCchhhHHHhhCCCC---cE--EEEcccc
Confidence 322100 00 22 12 34455443 35667765 33 4799999
Q ss_pred cC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC-CCceeec-
Q 013461 278 AT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI-HGLSIAS- 353 (442)
Q Consensus 278 g~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~-~g~~~~~- 353 (442)
+. ++|++++++++++.+....... +.+.+|+.++++.++++.++. ++.+++++++.+++++.|++. +++....
T Consensus 239 ~~G~~ig~v~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 315 (377)
T PRK02936 239 GNGIPVGAMIGKKELGTAFGPGSHGS--TFGGNPLAMAAAKEVLQVIKQ-PSFLEEVQEKGEYFLQKLQEELEHLECVKN 315 (377)
T ss_pred cCCCccEEEEEcHHHHhhccCCCCCC--CCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCcEEe
Confidence 74 3589999999999876433332 334689999999999998854 347788999999999988763 2232211
Q ss_pred -CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 354 -NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 354 -~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
.+.+.++++.+..+ ..++.+. |.++||++.+.. ++.+|++++..+|++++++++++|++
T Consensus 316 v~~~g~~~~i~~~~~----------~~~~~~~-l~~~gv~v~~~g---------~~~lRi~p~~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 316 IRGKGLMIGIECTEE----------VAPVIEQ-LREEGLLVLSAG---------PNVIRLLPPLVVTKEELDQAVYLLKK 375 (377)
T ss_pred EeecceEEEEEecch----------HHHHHHH-HHHCCeEEecCC---------CCEEEEECCcccCHHHHHHHHHHHHH
Confidence 13567788877421 2356664 556799987642 13499999999999999999999987
Q ss_pred H
Q 013461 433 I 433 (442)
Q Consensus 433 ~ 433 (442)
+
T Consensus 376 ~ 376 (377)
T PRK02936 376 V 376 (377)
T ss_pred h
Confidence 5
No 40
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=1.4e-27 Score=240.03 Aligned_cols=322 Identities=20% Similarity=0.231 Sum_probs=228.0
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeec-CCCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFAS-ANYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s-~~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|+++++++|.++| +||+++|||.+ +++++++ +||+|++++.+++.+...... .++..+.+.++++++++++|
T Consensus 18 ~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~ 93 (413)
T cd00610 18 YPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL----GFFYNEPAVELAELLLALTP 93 (413)
T ss_pred CCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC----cccCCHHHHHHHHHHHHhCC
Confidence 47889999999999 59999999977 4666666 789999999999976322111 12468999999999999999
Q ss_pred --CCcEEEEcchHHHHHhhhhhh---ccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCC--------
Q 013461 169 --TPDSILYSYGLSTMFSAIPCF---CKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHN-------- 223 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~---~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~-------- 223 (442)
.++++++++|++|+..+++++ .++.++|+.+..+|+.+..++.+++. .+..++++
T Consensus 94 ~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (413)
T cd00610 94 EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAE 173 (413)
T ss_pred CCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhh
Confidence 788999999999999999876 34555677788899988877776643 36778887
Q ss_pred ---CHHHHHHHHHhhcccccc----------------------------cccccc--------cccCCCc-cccccCCCC
Q 013461 224 ---DMDSLRNTLERVTADNKR----------------------------SNSFGV--------LGRSGRG-LTEHCGVPV 263 (442)
Q Consensus 224 ---d~~~Le~~l~~~~~~~~~----------------------------a~~~g~--------~G~~g~g-~~~~~~v~~ 263 (442)
|+++|++.+++....... .|+.-+ +|+.|.+ ..+++++.|
T Consensus 174 ~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~ 253 (413)
T cd00610 174 LADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEP 253 (413)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCC
Confidence 788888888753111100 111111 2333433 335566655
Q ss_pred CceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 013461 264 DKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRT 341 (442)
Q Consensus 264 ~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~ 341 (442)
| +.||||+++. +.|++++++++++.+......+..+.+.+|+.++++.++++.+++ +++.++++++++++++
T Consensus 254 ---d--~~t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~~~~~~~~~l~~ 327 (413)
T cd00610 254 ---D--IVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-EGLLENAAELGEYLRE 327 (413)
T ss_pred ---C--eEEEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHH
Confidence 3 4579999975 247888999999986222222334456688888999999998876 4588999999999999
Q ss_pred hhccCC---CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCC
Q 013461 342 GLSDIH---GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH 418 (442)
Q Consensus 342 ~L~~~~---g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~ 418 (442)
.|+++. +......+.++++++.+.........+.....++.+.++ ++||++.+.. +..+|++++..+
T Consensus 328 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~---------~~~lR~~~~~~~ 397 (413)
T cd00610 328 RLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG---------GNVIRLLPPLII 397 (413)
T ss_pred HHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC---------CCEEEEECCCcC
Confidence 987652 111111346788888885431111112234556777644 5699998864 134999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 013461 419 SEADLVKACESLKRI 433 (442)
Q Consensus 419 t~eei~~~i~~l~~~ 433 (442)
|++|+++++++|+++
T Consensus 398 t~~~i~~~~~~l~~~ 412 (413)
T cd00610 398 TEEEIDEGLDALDEA 412 (413)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999875
No 41
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=2e-27 Score=239.80 Aligned_cols=322 Identities=19% Similarity=0.241 Sum_probs=227.2
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecCCCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASANYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-- 168 (442)
++++++++|.|+| +||++||||+++++.+++ +||+|++|+.+++++++..+ ++ -..+.+.+|+++|+++++
T Consensus 55 ~~~i~~a~G~~l~D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~---~~~~~~~~lae~L~~~~p~~ 129 (459)
T PRK06082 55 LDVLASAEGIYIEDVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP--RR---FTNETAIECAEKLTEIAGGE 129 (459)
T ss_pred CceEEeeeeeEEEECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc--Cc---cCCHHHHHHHHHHHHhCCCC
Confidence 6789999999999 599999999876776666 68999999999999865432 11 236888999999999986
Q ss_pred CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCCeE------------EEec--------CCC-
Q 013461 169 TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRSTV------------VYFK--------HND- 224 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v------------~~~~--------~~d- 224 (442)
.+++++++||++|++.|++. +.++..+|.+...+|+.+..++.+++... ..++ .++
T Consensus 130 ~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06082 130 LNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA 209 (459)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh
Confidence 35788889999999999964 35677889999999999888887765321 1111 222
Q ss_pred -------HHHHHHHHHhhcccccc--------------------------------------cccccccccCCCc-cccc
Q 013461 225 -------MDSLRNTLERVTADNKR--------------------------------------SNSFGVLGRSGRG-LTEH 258 (442)
Q Consensus 225 -------~~~Le~~l~~~~~~~~~--------------------------------------a~~~g~~G~~g~g-~~~~ 258 (442)
++++++++++.. .... ..++ |++|.+ ..++
T Consensus 210 ~~~~~~~~~~l~~~i~~~~-~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~---GRtG~~fa~e~ 285 (459)
T PRK06082 210 DGSDVHYADYLEYVIEKEG-GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGM---GRTGEWFTHQA 285 (459)
T ss_pred hHHHHHHHHHHHHHHhcCC-CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC---CccchhhHhHh
Confidence 245677665321 1100 2233 556655 4588
Q ss_pred cCCCCCceeEEEEeccccccCC---CcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHH
Q 013461 259 CGVPVDKIDIVTAAMGHALATE---GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKN 335 (442)
Q Consensus 259 ~~v~~~~~diii~S~sK~lg~~---GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~ 335 (442)
+|+.|| |+ +|+|++|.+ .|.+++++++.+... ..... ++.+.+|+.|++++++|+++++. ++.++++++
T Consensus 286 ~gv~PD---iv--~~gKgl~gG~~P~~av~~~~~i~~~~~-~~~~~-~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~ 357 (459)
T PRK06082 286 YGIEPD---IL--CIGKGLGGGLVPIAAMITKDKYNTAAQ-ISLGH-YTHEKSPLGCAAALATIEVIEQE-GLLEKVKAD 357 (459)
T ss_pred hCCCCC---EE--EecccccCCCCcceEEEEcHHHHhhcc-CCCCC-CCCCcCHHHHHHHHHHHHHHHhc-CHHHHHHHH
Confidence 999874 55 499999732 366778888765432 11122 45567999999999999999765 489999999
Q ss_pred HHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEE
Q 013461 336 TAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL 412 (442)
Q Consensus 336 ~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi 412 (442)
+++|++.|+++. ..++.. ...+.++.+.+..+......+......+...+++ +||++.+... ..+|+
T Consensus 358 g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~---------~~i~~ 427 (459)
T PRK06082 358 SQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVSQG---------NVIQL 427 (459)
T ss_pred HHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEecCC---------CEEEE
Confidence 999999997751 122211 2356778888753221111122234567766664 6999876321 34999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHHhhcc
Q 013461 413 FVSAAHSEADLVKACESLKRISAVVLRDR 441 (442)
Q Consensus 413 ~~~~~~t~eei~~~i~~l~~~~~~~~~~~ 441 (442)
+++..+|++||+++++++++++.++.++-
T Consensus 428 ~Ppl~it~~eid~~~~~l~~~l~~~~~~~ 456 (459)
T PRK06082 428 SPPLIITREELTQALAILEEAIAKICQDF 456 (459)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999998876653
No 42
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.96 E-value=1.7e-27 Score=237.36 Aligned_cols=311 Identities=19% Similarity=0.223 Sum_probs=220.5
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
.|.++++++|.++| +||++||||.| ++++|+ +||+|.+|+.+++++....+ .. ...+.+.+++++|+++.
T Consensus 13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~---~~--~~~~~~~~la~~l~~~~ 86 (389)
T PRK01278 13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWHVS---NL--YRIPEQERLAERLVENS 86 (389)
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCccc---cc--cCChHHHHHHHHHHhhC
Confidence 36788999999999 59999999977 467888 69999999999998742211 11 25688899999999998
Q ss_pred CCCcEEEEcchHHHHHhhhhhh----ccCC-----CEEEeCCCchHHHHHHHHhcCCe------------EEEecCCCHH
Q 013461 168 GTPDSILYSYGLSTMFSAIPCF----CKKG-----DLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMD 226 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a~----~~~g-----d~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d~~ 226 (442)
+.+++++++||++|+..+++++ ..+| ++|..+..+|+.+..++.+++.. +..++++|++
T Consensus 87 ~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 166 (389)
T PRK01278 87 FADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIE 166 (389)
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHH
Confidence 8889999999999999999876 2334 47788888998877776655432 2346678999
Q ss_pred HHHHHHHhhccc---------c--cc--------------cccccc--------cccCCCcc-ccccCCCCCceeEEEEe
Q 013461 227 SLRNTLERVTAD---------N--KR--------------SNSFGV--------LGRSGRGL-TEHCGVPVDKIDIVTAA 272 (442)
Q Consensus 227 ~Le~~l~~~~~~---------~--~~--------------a~~~g~--------~G~~g~g~-~~~~~v~~~~~diii~S 272 (442)
++++.++..... . .. .|++-+ +|++|.+. .+++++.|+ +.|
T Consensus 167 ~l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd-----i~t 241 (389)
T PRK01278 167 ALKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD-----IMA 241 (389)
T ss_pred HHHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC-----EEE
Confidence 999888541110 0 00 111111 24444433 356777664 457
Q ss_pred ccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC----
Q 013461 273 MGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI---- 346 (442)
Q Consensus 273 ~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~---- 346 (442)
|||+++. +.|++++++++++.+.......+| +.+|+.++++.++++.+++. +..++++++++++++.|+++
T Consensus 242 ~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~~l~~~l~~l~~~~ 318 (389)
T PRK01278 242 VAKGIGGGFPLGACLATEEAAKGMTPGTHGSTY--GGNPLAMAVGNAVLDVILAP-GFLDNVQRMGLYLKQKLEGLVDRF 318 (389)
T ss_pred EehhccCCcceEEEEEcHHHHhccCCCCCCCCC--CccHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999973 358899999998887654444333 45899999999999988653 46788888888888887654
Q ss_pred CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHH
Q 013461 347 HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKA 426 (442)
Q Consensus 347 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~ 426 (442)
+++.....+.+.++++.+.. ...+++++++++ ||++.+... ..+|++++..+|++|++++
T Consensus 319 ~~~~~~v~g~G~~~~i~~~~----------~~~~~~~~l~~~-GV~~~p~~~---------~~lR~~p~~~~~~~~i~~~ 378 (389)
T PRK01278 319 PDVIEEVRGKGLLLGLKCVV----------PNRDLVQALRDE-GLLTVGAGD---------NVVRLLPPLIITEEEIDEA 378 (389)
T ss_pred CCceeeEecccEEEEEEEec----------CHHHHHHHHHHC-CeEEeecCC---------CEEEEeCCcccCHHHHHHH
Confidence 11211112345566665521 124677776655 999887531 3499999998999999999
Q ss_pred HHHHHHHHHH
Q 013461 427 CESLKRISAV 436 (442)
Q Consensus 427 i~~l~~~~~~ 436 (442)
+++|++++.+
T Consensus 379 l~~l~~~l~~ 388 (389)
T PRK01278 379 LERLERAAES 388 (389)
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 43
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.96 E-value=3.8e-27 Score=237.25 Aligned_cols=315 Identities=15% Similarity=0.179 Sum_probs=226.2
Q ss_pred CCeeecCCC-CeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAG-PHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g-~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
+.++.+++| .|+| .||++||||.++ ....++ +||+|.+|+.+++++....+ + +...+...+|.++|++.++
T Consensus 64 ~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~--~~~~~~~~~lae~L~~~~p 138 (459)
T PRK11522 64 GAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---Q--ELLDPLRAMLAKTLAALTP 138 (459)
T ss_pred CeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---c--ccCCHHHHHHHHHHHHhCC
Confidence 567899999 9999 599999999654 334444 48999999999999854322 1 2346888899999999875
Q ss_pred --CCcEEEEcchHHHHHhhhhhh---cc---CCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCCCHHHH
Q 013461 169 --TPDSILYSYGLSTMFSAIPCF---CK---KGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMDSL 228 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~---~~---~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d~~~L 228 (442)
.+++.+++||++|++.|++.. .+ |..+|.+...+|+.+...+.+++.. +..++.+|.+++
T Consensus 139 ~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 218 (459)
T PRK11522 139 GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAM 218 (459)
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHH
Confidence 467899999999999999743 32 4468888999999887777665421 345677899999
Q ss_pred HHHHHhhc---ccccc--------------------------------------cccccccccCCCc-cccccCCCCCce
Q 013461 229 RNTLERVT---ADNKR--------------------------------------SNSFGVLGRSGRG-LTEHCGVPVDKI 266 (442)
Q Consensus 229 e~~l~~~~---~~~~~--------------------------------------a~~~g~~G~~g~g-~~~~~~v~~~~~ 266 (442)
++.++... ..... .+ .| +|++|.+ ..+++|+.||
T Consensus 219 ~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~-tG-~GRtG~~~a~e~~gv~PD-- 294 (459)
T PRK11522 219 RTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ-TG-MGRTGKMFACEHENVQPD-- 294 (459)
T ss_pred HHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce-ec-CCccchhhhhhccCCCCC--
Confidence 99886431 11000 11 12 3556655 5688999874
Q ss_pred eEEEEeccccccC---CCcEEEcCHHhHHHHHhhCCceeccC--CCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 013461 267 DIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFSA--SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRT 341 (442)
Q Consensus 267 diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~~~~s~--s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~ 341 (442)
|+ ||+|++|. +-|.+++++++++.+... ++.+++ +.+|+.|++++++|++++++ ++.+++++++++|++
T Consensus 295 -iv--t~gK~lggG~~Pigav~~~~~i~~~~~~~--~~~~~~T~~gnp~~~Aaala~L~~i~~~-~l~~~~~~~g~~l~~ 368 (459)
T PRK11522 295 -IL--CLAKALGGGVMPIGATIATEEVFSVLFDN--PFLHTTTFGGNPLACAAALATINVLLEQ-NLPAQAEQKGDYLLD 368 (459)
T ss_pred -EE--EechhhhCCCccceeEEEcHHHHHHhccC--CcccCCCCCCCHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHH
Confidence 44 79999973 346677788888876422 223333 34999999999999999875 589999999999999
Q ss_pred hhccCC-Cce-eec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCC
Q 013461 342 GLSDIH-GLS-IAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAA 417 (442)
Q Consensus 342 ~L~~~~-g~~-~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~ 417 (442)
.|+++. .++ +.. ...+.++.+.+.++ .....+...+++ +||++.+.... +..+|++++..
T Consensus 369 ~L~~l~~~~~~~i~~VrG~Gl~~giel~~~--------~~~~~i~~~l~~-~Gvl~~~~~~~-------~~~lr~~Ppl~ 432 (459)
T PRK11522 369 GFRQLAREYPDLVQEARGKGMLMAIEFVDN--------EIGYNFASEMFR-QRVLVAGTLNN-------AKTIRIEPPLT 432 (459)
T ss_pred HHHHHHHhCCCceeeEEeceeEEEEEecCc--------hHHHHHHHHHHH-CCeEEEecCCC-------CCEEEEECCcc
Confidence 997751 122 111 23577888888432 123467776554 69999754211 24599999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q 013461 418 HSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 418 ~t~eei~~~i~~l~~~~~~~~ 438 (442)
+|++|+++++++|+++++++.
T Consensus 433 ~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 433 LTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987754
No 44
>PRK06105 aminotransferase; Provisional
Probab=99.96 E-value=7.3e-27 Score=235.91 Aligned_cols=325 Identities=16% Similarity=0.124 Sum_probs=225.4
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+++++++++..+..+ ..+.+...+++++|++.++
T Consensus 30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~---~~~~~~~~~lae~L~~~~p 106 (460)
T PRK06105 30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFS---HKSHGPVIDLAEKLVAMAP 106 (460)
T ss_pred CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeeccc---ccCCHHHHHHHHHHHHhCC
Confidence 36789999999999 599999999654 333444 48999999999999865432211 1246778899999999885
Q ss_pred --CCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCCC-
Q 013461 169 --TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHND- 224 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d- 224 (442)
.+++++++||++|++.|++.. .+|.++|.++..+|+.+..++.+++.. +..++..+
T Consensus 107 ~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~ 186 (460)
T PRK06105 107 VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHY 186 (460)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcc
Confidence 367888999999999999763 245678888999999987776655422 11122111
Q ss_pred -----------------HHHHHHHHHhhc-ccccc---------------------------------------cccccc
Q 013461 225 -----------------MDSLRNTLERVT-ADNKR---------------------------------------SNSFGV 247 (442)
Q Consensus 225 -----------------~~~Le~~l~~~~-~~~~~---------------------------------------a~~~g~ 247 (442)
.+++|+++.... ..... ..++|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GR 266 (460)
T PRK06105 187 YRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGR 266 (460)
T ss_pred cccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCc
Confidence 356777775322 11100 345666
Q ss_pred cccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCC-----ceeccCCCcHHHHHHHHHHH
Q 013461 248 LGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS-----GYVFSASLPPYLASAAITAI 319 (442)
Q Consensus 248 ~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~-----~~~~s~s~~p~~aaaa~aal 319 (442)
+|+ .+..+++++.|| +.+|+|++|. +.|.+++++++++.+..... .+.++.+.+|+.|++++++|
T Consensus 267 tG~--~f~~~~~~v~PD-----i~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L 339 (460)
T PRK06105 267 TGN--MFGCETFGIKPD-----ILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENL 339 (460)
T ss_pred Cch--hhhHHhcCCCCC-----eeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHH
Confidence 553 223578999885 4469999963 46789999999998764321 13345567999999999999
Q ss_pred HHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEEe
Q 013461 320 DVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 320 ~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
+++++. ++.+++++++++|++.|+++...++.. ...+.++.+.+..+.... ........++...++ ++||++.
T Consensus 340 ~~i~~~-~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~ 417 (460)
T PRK06105 340 AIIEER-DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH-EHGVISR 417 (460)
T ss_pred HHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-HCCeEEE
Confidence 999875 589999999999999998763222211 134566777764321111 011122456776555 5699997
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+.. +.+|++++..+|++||++++++++++++++.
T Consensus 418 ~~g----------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 418 AMG----------DTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred ecC----------CEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 632 2399999999999999999999999998753
No 45
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.96 E-value=5.6e-27 Score=234.51 Aligned_cols=314 Identities=16% Similarity=0.168 Sum_probs=220.9
Q ss_pred CeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--
Q 013461 94 PVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-- 168 (442)
Q Consensus 94 ~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-- 168 (442)
.++++++|.|+| .||++||||.++ ...+++ +||+|.+|++++++++..... ..-+.+...+|.++|++.++
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~~ 103 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF----GGFTHEPAVELAQKLLEILPPS 103 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc----cccCCHHHHHHHHHHHhhCCCC
Confidence 358999999999 599999999654 333333 489999999999998653221 11246778899999999875
Q ss_pred CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecCC---
Q 013461 169 TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN--- 223 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~~--- 223 (442)
.+++.+++||++|++.|++... +|..+|.+...+|+.++.++.+++.. +..++..
T Consensus 104 ~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 183 (429)
T PRK06173 104 LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIK 183 (429)
T ss_pred cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcc
Confidence 5788999999999999997532 35567889999999877766654421 1112211
Q ss_pred --------CHHHHHHHHHhhccccc-----------------c----------------------cccccccccCCCcc-
Q 013461 224 --------DMDSLRNTLERVTADNK-----------------R----------------------SNSFGVLGRSGRGL- 255 (442)
Q Consensus 224 --------d~~~Le~~l~~~~~~~~-----------------~----------------------a~~~g~~G~~g~g~- 255 (442)
+.+.|++.++....... . .| .| +|++|.+.
T Consensus 184 ~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG-~GrtG~~~a 261 (429)
T PRK06173 184 FGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TG-FGRTGKLFA 261 (429)
T ss_pred cchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cC-CCcCCcchH
Confidence 24556677753211100 0 34 55 47788775
Q ss_pred ccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhh-CCceec--cCCCcHHHHHHHHHHHHHHhcChHHH
Q 013461 256 TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS-SSGYVF--SASLPPYLASAAITAIDVLEENPDLI 329 (442)
Q Consensus 256 ~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~-~~~~~~--s~s~~p~~aaaa~aal~~l~~~~~~~ 329 (442)
.+++|+.| ||+ +|+|++|. +.+.+++++++++.+... ...+.+ +.+.+|+.|++++++|+++++.+ ++
T Consensus 262 ~~~~gv~P---Div--~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~-~~ 335 (429)
T PRK06173 262 LEHAGVVP---DIM--CIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESP-WQ 335 (429)
T ss_pred HHhcCCCC---CEE--EeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCC-HH
Confidence 67899987 455 49999961 234567888999987532 112222 33568999999999999998754 69
Q ss_pred HHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCC
Q 013461 330 TKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 407 (442)
Q Consensus 330 ~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~ 407 (442)
++++++.++|++.|+++.+++... ...++++.+.+..+. ...++.+.+ .++||++.+..
T Consensus 336 ~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~--------~~~~i~~~l-~e~Gi~v~~~g---------- 396 (429)
T PRK06173 336 QNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV--------NMATLQPRF-VEHGIWVRPFG---------- 396 (429)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc--------cHHHHHHHH-HHCCeEEEecC----------
Confidence 999999999999997643333222 136788888885321 123567654 45699997642
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 408 VGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 408 ~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+.||+.|+..+|++|+++++++|++++.++.
T Consensus 397 ~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 397 KLVYIMPPFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred CEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 2399999999999999999999999998764
No 46
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.96 E-value=5.8e-27 Score=234.36 Aligned_cols=309 Identities=15% Similarity=0.155 Sum_probs=219.8
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
.+++.++.|.|+| .||++||||.++ ....++ +||+|.+|+.+++++....+ + +-..+...++.++|++.++.
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~--~~~~~~~~~lAe~L~~~~p~ 132 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---Q--ELLDPLRALLAKTLAALTPG 132 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---c--ccCCHHHHHHHHHHHHhCCC
Confidence 3445777889999 599999999654 333444 58999999999999854322 1 23467888999999998763
Q ss_pred --CcEEEEcchHHHHHhhhhhh---c---cCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHHHHH
Q 013461 170 --PDSILYSYGLSTMFSAIPCF---C---KKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDSLR 229 (442)
Q Consensus 170 --e~~i~~~sG~~a~~~ai~a~---~---~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~~Le 229 (442)
+.+++++||++|++.|++.. . ++.++|.+...+|+.+...+.+++. .+..+|.+|.++++
T Consensus 133 ~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~ 212 (442)
T TIGR03372 133 KLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAML 212 (442)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHH
Confidence 56888899999999999743 2 4556788999999998777766542 23556778888888
Q ss_pred HHHHhhc---ccccc---------------------------------------cccccccccCCCc-cccccCCCCCce
Q 013461 230 NTLERVT---ADNKR---------------------------------------SNSFGVLGRSGRG-LTEHCGVPVDKI 266 (442)
Q Consensus 230 ~~l~~~~---~~~~~---------------------------------------a~~~g~~G~~g~g-~~~~~~v~~~~~ 266 (442)
+.++... ..... ..++ |++|.+ ..+++|+.||
T Consensus 213 ~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~---GRtG~~~a~e~~gv~PD-- 287 (442)
T TIGR03372 213 KALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGM---GRTGKMFACEHEGVQPD-- 287 (442)
T ss_pred HHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCC---CccccchhhhhcCCCCC--
Confidence 8876421 11000 2233 555554 5688999874
Q ss_pred eEEEEeccccccC---CCcEEEcCHHhHHHHHhhCCceeccC--CCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 013461 267 DIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFSA--SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRT 341 (442)
Q Consensus 267 diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~~~~s~--s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~ 341 (442)
|+ +|+|++|. +.|.+++++++++.+... ++.+++ +.+|+.+++++++|+++++.+ +.++.++++++|++
T Consensus 288 -iv--t~gK~lg~G~~Pigavv~~~~i~~~~~~~--~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~-l~~~~~~~G~~l~~ 361 (442)
T TIGR03372 288 -IL--CLAKALGGGVMPIGATIATEAVFSVLFDN--PFLHTTTFGGNPLACAAALATINELLEKN-LPAQAAIKGDFLLD 361 (442)
T ss_pred -ee--eehhhhcCCcccceEEEecHHHHHhhhcc--CccccCCCCCCHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHH
Confidence 44 59999973 346677889998887422 233333 348999999999999997654 88999999999999
Q ss_pred hhccCC-Cce-ee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCC
Q 013461 342 GLSDIH-GLS-IA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAA 417 (442)
Q Consensus 342 ~L~~~~-g~~-~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~ 417 (442)
.|+++. .++ .. ....+.++.+.+.++ .....+++.+++ +||++.+..+. +..+|+.++..
T Consensus 362 ~L~~l~~~~~~~i~~vRG~Gl~~giel~~~--------~~~~~i~~~l~~-~Gvl~~~~~~~-------~~~lr~~Ppl~ 425 (442)
T TIGR03372 362 GFQQLAAEYPDLIIEARGKGLLMAIEFRDN--------EIGYAFAKELFQ-QNILVAGTLNN-------AKSIRIEPPLT 425 (442)
T ss_pred HHHHHHHhCCCceEEEecceEEEEEEeCCh--------HHHHHHHHHHHH-CCcEEeecCCC-------CCEEEEECCcc
Confidence 987651 111 11 123677888888432 223467776554 69999754321 24599999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 013461 418 HSEADLVKACESLKRI 433 (442)
Q Consensus 418 ~t~eei~~~i~~l~~~ 433 (442)
+|++|+|+++++++++
T Consensus 426 ~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 426 ITIEQCALVIKAAKDA 441 (442)
T ss_pred cCHHHHHHHHHHHHHh
Confidence 9999999999999876
No 47
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=232.32 Aligned_cols=320 Identities=18% Similarity=0.219 Sum_probs=225.9
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|+++.+++|.++| .||++||||.++ ....++ +||+|.+|+.+++++. ... .-..+...+|.++|.+.++
T Consensus 35 ~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~------~~~~~~~~~la~~L~~~~~ 107 (433)
T PRK00615 35 TPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERG-TSY------GLTSEQEILFAEELFSYLG 107 (433)
T ss_pred CCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhC-CCC------CCCCHHHHHHHHHHHHhCC
Confidence 47789999999999 599999999654 444444 4899999999999873 211 1245677899999999886
Q ss_pred C--CcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHH---HHHHHhcC----------------CeEEEecCCC
Q 013461 169 T--PDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGI---QNGLYLSR----------------STVVYFKHND 224 (442)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~---~~~~~l~g----------------~~v~~~~~~d 224 (442)
. +++.+++||++|++.|++. +.+|..+|.+...+|+.+ ..++.+++ .....++|||
T Consensus 108 ~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 187 (433)
T PRK00615 108 LEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYND 187 (433)
T ss_pred CCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCC
Confidence 4 5889999999999999964 457777888899999965 43433322 1134567899
Q ss_pred HHHHHHHHHhhcccccc--------------------------------------cccccc-cccCCCccccccCCCCCc
Q 013461 225 MDSLRNTLERVTADNKR--------------------------------------SNSFGV-LGRSGRGLTEHCGVPVDK 265 (442)
Q Consensus 225 ~~~Le~~l~~~~~~~~~--------------------------------------a~~~g~-~G~~g~g~~~~~~v~~~~ 265 (442)
++++++.+++....... .| .|+ +| ++|..+++|+.||
T Consensus 188 ~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~R~G--~~ga~~~~gv~PD- 263 (433)
T PRK00615 188 FQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGFRVA--QGGAAAIYHVKPD- 263 (433)
T ss_pred HHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-cccccc--HhHHHHhcCCCCC-
Confidence 99999998754322110 22 232 33 2466788999874
Q ss_pred eeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceec-cCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHh
Q 013461 266 IDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVF-SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTG 342 (442)
Q Consensus 266 ~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~-s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~ 342 (442)
|+ +|+|++|. ++|++++++++++.+...+..+.+ +.+.+|+.|++++++|+++++.+ ++++++++.++|.+.
T Consensus 264 --i~--~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~-~~~~~~~~g~~l~~~ 338 (433)
T PRK00615 264 --IT--VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQG-FYTQLSTLEQNFLSP 338 (433)
T ss_pred --eE--EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHH
Confidence 54 59999973 478999999999988643322222 33568999999999999997654 799999999999777
Q ss_pred hccC---CCceeecCCCCCEEEEEecCCCCC--ch---hhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEe
Q 013461 343 LSDI---HGLSIASNPESPIVFLILEKSTGS--MK---NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 414 (442)
Q Consensus 343 L~~~---~g~~~~~~~~~~i~~~~~~~~~~~--~~---~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~ 414 (442)
|+++ .|+++.....+.++.+.+..+..+ .+ .+......+...+++ +||++.+..++. ..+
T Consensus 339 l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~-----------~~l 406 (433)
T PRK00615 339 IEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPFEA-----------SFL 406 (433)
T ss_pred HHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCccccc-----------cce
Confidence 7653 244332223566777777543211 00 122345567776554 599998765432 257
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 415 SAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 415 ~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+..||++|||+++++++++++++.+
T Consensus 407 s~~ht~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 407 SSAHSMENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHhc
Confidence 7889999999999999999998764
No 48
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.96 E-value=8.4e-27 Score=233.42 Aligned_cols=310 Identities=20% Similarity=0.234 Sum_probs=219.6
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|.++++++|.|+| +||++||||.++ ..++++ +||+|++++.+++++++..+. .+ ..+.+.+++++++++.|.
T Consensus 24 ~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~~~ 98 (401)
T PRK00854 24 DVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR---AF--RNDQLAPLYEELAALTGS 98 (401)
T ss_pred CceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc---cc--CCHHHHHHHHHHHhhCCC
Confidence 5678899999999 599999998654 223333 489999999999999765432 22 257889999999999999
Q ss_pred CcEEEEcchHHHHHhhhhhhc-----------cCCCEEEeCCCchHHHHHHHHhcC------------CeEEEecCCCHH
Q 013461 170 PDSILYSYGLSTMFSAIPCFC-----------KKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMD 226 (442)
Q Consensus 170 e~~i~~~sG~~a~~~ai~a~~-----------~~gd~Vi~~~~~h~s~~~~~~l~g------------~~v~~~~~~d~~ 226 (442)
+++++++||++|++.+++++. ++.++|.++..+|+.+...+.+++ ..+..++++|++
T Consensus 99 ~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 178 (401)
T PRK00854 99 HKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAE 178 (401)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHH
Confidence 999999999999999998773 234678899999998765553321 345678899999
Q ss_pred HHHHHHHhhcccc-------------c----c------------------cccccccccCCCccc-cccCCCCCceeEEE
Q 013461 227 SLRNTLERVTADN-------------K----R------------------SNSFGVLGRSGRGLT-EHCGVPVDKIDIVT 270 (442)
Q Consensus 227 ~Le~~l~~~~~~~-------------~----~------------------a~~~g~~G~~g~g~~-~~~~v~~~~~diii 270 (442)
++++.+.+.+... . . .+. | +|.+|.+.. +++++.| |+++
T Consensus 179 ~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g-~g~~g~~~~~~~~g~~~---D~~~ 253 (401)
T PRK00854 179 ALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-G-LGRTGKLLAEEHEGIEA---DVTL 253 (401)
T ss_pred HHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCchHhHHhhcCCCC---CEEE
Confidence 9998875422100 0 0 222 1 244443332 3566655 4554
Q ss_pred EeccccccC---CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC
Q 013461 271 AAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH 347 (442)
Q Consensus 271 ~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~ 347 (442)
++|+++. ++|++++++++++.++......+| +.+|+.++++.++|+.+++. ++.++++++++++.+.|+++
T Consensus 254 --~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~--~~~~~~~aa~~a~L~~l~~~-~~~~~~~~~~~~l~~~L~~~- 327 (401)
T PRK00854 254 --IGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTF--GGNPLACAVARAALKVLTEE-GMIENAAEMGAYFLEGLRSI- 327 (401)
T ss_pred --ecccccCCccCeEEEEEcHHHHhcccCCCCCCCC--CcCHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhh-
Confidence 6799952 357799999999987643333333 34899999999999988753 37899999999999999876
Q ss_pred Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHH
Q 013461 348 GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVK 425 (442)
Q Consensus 348 g~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~ 425 (442)
+.... ..+.+.++.+.+..+. ....++++.++ ++||.+.+.. +..||++++..+|++||++
T Consensus 328 ~~~~~~~~~g~g~~~~i~~~~~~-------~~~~~~~~~L~-~~GV~v~~~~---------~~~lR~~p~~~~t~e~i~~ 390 (401)
T PRK00854 328 RSNIVREVRGRGLMLAVELEPEA-------GGARQYCEALK-ERGLLAKDTH---------DHTIRLAPPLVITREQVDW 390 (401)
T ss_pred ccCceEEEeccceEEEEEEecCc-------hhHHHHHHHHH-HCCeEEecCC---------CCEEEEeCCcccCHHHHHH
Confidence 32211 1234666666553211 12346777655 4699986431 2359999999999999999
Q ss_pred HHHHHHHHHH
Q 013461 426 ACESLKRISA 435 (442)
Q Consensus 426 ~i~~l~~~~~ 435 (442)
++++|++++.
T Consensus 391 ~i~~l~~~l~ 400 (401)
T PRK00854 391 ALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHhh
Confidence 9999998753
No 49
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.96 E-value=4.8e-27 Score=229.03 Aligned_cols=281 Identities=16% Similarity=0.210 Sum_probs=203.9
Q ss_pred CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhhhhhhccCCC
Q 013461 117 ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSAIPCFCKKGD 194 (442)
Q Consensus 117 ~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~ai~a~~~~gd 194 (442)
|||||+..||++++++.+++++|| |+.+.|.+||+++|+++|. ++++++++|++|+..++.+++++||
T Consensus 27 ~~ylgl~~~~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred cccccCCCChhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCC
Confidence 599999999999999999999985 4569999999999999998 8999999999999999999999999
Q ss_pred EEEe---CCCchHHHHHHHHhcCCeEEEecCCCHHHHH--------------------------HHHHhhcccccc----
Q 013461 195 LIVA---DEGVHWGIQNGLYLSRSTVVYFKHNDMDSLR--------------------------NTLERVTADNKR---- 241 (442)
Q Consensus 195 ~Vi~---~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le--------------------------~~l~~~~~~~~~---- 241 (442)
.|++ |.++|.++..+++++|++++. ++|+++++ ++.+...+....
T Consensus 97 ~Vli~~~d~p~~~s~~~~~~l~ga~~~~--~~~l~~l~~~~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livD 174 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIPRSCKLAGAEYFE--SDELSELKKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVD 174 (346)
T ss_pred EEEECCCCCCCchhHHHHHHHcCCEEec--cCCHHHHhhCcCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEE
Confidence 9874 478999999999999987643 34444432 221111000000
Q ss_pred -cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHH
Q 013461 242 -SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAI 319 (442)
Q Consensus 242 -a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal 319 (442)
+|+.|+.|..+.+...+++ .|++++||||++ |..|||+++++++++.++....++.++ .+|..++++.++|
T Consensus 175 EAy~~~~~~~~~~~~~~~~~-----~divv~s~SKalaG~r~G~v~~~~~li~~l~~~~~~~~~s--~~~~~~~aa~~aL 247 (346)
T TIGR03576 175 DASGARVRRLYGQPPALDLG-----ADLVVTSTDKLMDGPRGGLLAGRKELVDKIKSVGEQFGLE--AQAPLLAAVVRAL 247 (346)
T ss_pred CCccccccccCCCCCHHHcC-----CcEEEeccchhccccceEEEEeCHHHHHHHHHhhcCcccC--ccHHHHHHHHHHH
Confidence 6666655433433332232 478899999999 778999999999999999887777775 3666777888898
Q ss_pred HHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCc
Q 013461 320 DVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRS 399 (442)
Q Consensus 320 ~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~ 399 (442)
+.+.. +..++.++++.+++.+.++++ .+.. +..+++++.+... + ..+++.++|+++||.++++..+
T Consensus 248 ~~~~~-~~~~~~l~~r~~~~~~~l~~~---~~~~-~~~~f~~~~~~~~------~---~~~~~~~ll~~~gV~v~~~~~f 313 (346)
T TIGR03576 248 EEFEL-SRIRDAFKRKEEVYLRLFDKL---NVER-TPTGFVIKGVEEE------K---LIEIGLDLLRNYGIITITAVGM 313 (346)
T ss_pred hhccH-HHHHHHHHHHHHHHHHHHHhC---CCCc-CCCeEEEEeCCCC------C---HHHHHHHHHHhCCEEEeCCccc
Confidence 76543 456788888988888877643 3332 3455777766321 1 1245556788889999986543
Q ss_pred ccccCCCCCceEEEecCCC-CHHHHHHHHHHHHHHH
Q 013461 400 MLDKCRLPVGIRLFVSAAH-SEADLVKACESLKRIS 434 (442)
Q Consensus 400 ~~~~~~~~~~iRi~~~~~~-t~eei~~~i~~l~~~~ 434 (442)
. ..+..+||++.... ++.|+++++++|++.+
T Consensus 314 ~----~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 314 P----GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred C----CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 1 11356999998421 1127999999998754
No 50
>PRK06541 hypothetical protein; Provisional
Probab=99.96 E-value=2.8e-26 Score=231.44 Aligned_cols=326 Identities=16% Similarity=0.173 Sum_probs=223.2
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
|+++++++|.|+| .||++||||.++ ..+|+ +||+|++|+.++++++..... +....+...++.++|++..+
T Consensus 35 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Av~~q~~~~~~~~~----~~~~~~~~~~la~~l~~~~p 109 (460)
T PRK06541 35 VPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGH-GRAELAEAAAKQAGTLAFFPL----WSYAHPPAIELAERLAALAP 109 (460)
T ss_pred CceEEeCcccEEEeCCCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhCcCccc----cccCCHHHHHHHHHHHHhCC
Confidence 6789999999999 599999999654 23444 489999999999998653321 11246778899999999875
Q ss_pred --CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEEec----
Q 013461 169 --TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFK---- 221 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~---- 221 (442)
.+++.+++||++|++.|++... +|..+|.+...+|+.+..++.+++.. +..++
T Consensus 110 ~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~ 189 (460)
T PRK06541 110 GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNF 189 (460)
T ss_pred CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcc
Confidence 4688999999999999997432 25668889999999988777665421 11121
Q ss_pred -----C-CC--------HHHHHHHHHhhcccccc----------------------------------------cccccc
Q 013461 222 -----H-ND--------MDSLRNTLERVTADNKR----------------------------------------SNSFGV 247 (442)
Q Consensus 222 -----~-~d--------~~~Le~~l~~~~~~~~~----------------------------------------a~~~g~ 247 (442)
+ ++ .+++++.++...+.... ..++|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR 269 (460)
T PRK06541 190 YRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR 269 (460)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 1 22 25677776532111000 235655
Q ss_pred cccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCCce--eccCCCcHHHHHHHHHHHHHH
Q 013461 248 LGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGY--VFSASLPPYLASAAITAIDVL 322 (442)
Q Consensus 248 ~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~~--~~s~s~~p~~aaaa~aal~~l 322 (442)
+|+ .+..+++|+.|| |+ +|||++|. +-|.+++++++++.+......+ .++.+.+|+.+++++++++.+
T Consensus 270 ~G~--~~a~~~~gv~PD---iv--t~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l 342 (460)
T PRK06541 270 LGE--MFGCERFGYVPD---II--TCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIF 342 (460)
T ss_pred Cch--hhhhhhcCCCCC---EE--EecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHH
Confidence 543 234678898874 54 59999973 3477888999988775432222 235567899999999999998
Q ss_pred hcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCch---h---hHHHHHHHHHHHHHhCCEEEe
Q 013461 323 EENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMK---N---DLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 323 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~---~---~~~~~~~i~~~~L~~~GV~v~ 394 (442)
++. ++.+++++++++|++.|+++...++.. ...+.++.+.+..+..+.. . +......+...++ ++||++.
T Consensus 343 ~~~-~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~ 420 (460)
T PRK06541 343 ERE-GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EAGLYCR 420 (460)
T ss_pred Hhc-cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hCCeEEE
Confidence 764 478999999999999998763232211 2467788888743211100 0 1111134566555 5699997
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+.... ...||++++..+|++|||+++++|++++.++..
T Consensus 421 ~~~~g-------~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 421 ADDRG-------DPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred ecCCC-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 63110 134999999999999999999999999987654
No 51
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.96 E-value=1.8e-26 Score=233.12 Aligned_cols=354 Identities=16% Similarity=0.139 Sum_probs=234.0
Q ss_pred CCCCCCCHHHHHHHHhhhcCCCCCcccccccccCCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHH
Q 013461 59 PPKRPLTKKEIDELCDEWVPESLIPPIIEEMRCEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSA 135 (442)
Q Consensus 59 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~ 135 (442)
+.+..++.+++.+...++.+-|+... .......|.++++++|.|+| .||++||||.++ ....++ +||+|.+|+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q 84 (460)
T PRK06916 6 TDKPSYTYEELSEKNKAYVWHPFTQM-KDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQ 84 (460)
T ss_pred CCCCCCChHHHHHHHhhccccccccc-cccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHH
Confidence 34557888777665444332232211 11111236789999999999 599999999654 333344 489999999999
Q ss_pred HHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchH
Q 013461 136 LEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHW 204 (442)
Q Consensus 136 l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~ 204 (442)
++++...+. +.-..+...+|.++|+++++ .+++++++||++|++.|++... +|..+|.+...+|+
T Consensus 85 l~~l~~~~~----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG 160 (460)
T PRK06916 85 LNKIAHSTL----LGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHG 160 (460)
T ss_pred HHhCCCccc----cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCc
Confidence 998643322 11245777899999999886 3688999999999999997432 35567889999999
Q ss_pred HHHHHHHhcCCe------------EEEecC--------C---------CHHHHHHHHHhhcccc------c-c-------
Q 013461 205 GIQNGLYLSRST------------VVYFKH--------N---------DMDSLRNTLERVTADN------K-R------- 241 (442)
Q Consensus 205 s~~~~~~l~g~~------------v~~~~~--------~---------d~~~Le~~l~~~~~~~------~-~------- 241 (442)
.+..++.+++.. +..++. + +.+.++++++...... + .
T Consensus 161 ~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~ 240 (460)
T PRK06916 161 DTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMI 240 (460)
T ss_pred ccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcc
Confidence 888777766522 111211 1 2345666665322110 0 0
Q ss_pred --------------------------cccccccccCCCc-cccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhH
Q 013461 242 --------------------------SNSFGVLGRSGRG-LTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVV 291 (442)
Q Consensus 242 --------------------------a~~~g~~G~~g~g-~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i 291 (442)
..++ |++|.+ ..+++|+.|| |+ +++|++|. +-|.++++++++
T Consensus 241 ~~~~~fl~~lr~lc~~~g~llI~DEV~TG~---GRtG~~~a~~~~gv~PD---iv--~~gK~l~gG~~Pi~av~~~~ei~ 312 (460)
T PRK06916 241 TMPKGYLKGLRNLCTKYNVLFITDEVATGF---GRTGKMFACEHENVTPD---IM--TAGKGLTGGYLPIAITVTTDEIY 312 (460)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEeechhhCC---CcCchhhHHHhcCCCCC---ee--eeehhhhcCccccceeeecHHHH
Confidence 3334 444544 4678999885 44 59999962 235588899998
Q ss_pred HHHHhh-----CCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEe
Q 013461 292 DHQRLS-----SSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLIL 364 (442)
Q Consensus 292 ~~l~~~-----~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~ 364 (442)
+.+... ...+..+.+.+|+.|++++++|+++++. ++.++++++.++|++.|+++....... ...+.++.+.+
T Consensus 313 ~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel 391 (460)
T PRK06916 313 NAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKT-NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIEL 391 (460)
T ss_pred HHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEe
Confidence 876421 1111223345999999999999999764 488999999999999998763222111 23456777777
Q ss_pred cCCCCCc---hhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 365 EKSTGSM---KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 365 ~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..+.... ..+.....++...++ ++||++.+.. ..+|+.++..+|++||++++++++++++++
T Consensus 392 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g----------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 392 VKNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPLG----------NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred ecccccccCCCchhhHHHHHHHHHH-HCCeEEEecC----------CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 5332111 011122346777655 4699987632 239999999999999999999999999765
No 52
>PLN02624 ornithine-delta-aminotransferase
Probab=99.96 E-value=2.2e-26 Score=233.47 Aligned_cols=315 Identities=21% Similarity=0.231 Sum_probs=223.0
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|.++++++|.|+| +||++||||.++ ..+.++ +||+|++|+++++++++..+. .+ ..+.+.+|+++|++++|.
T Consensus 58 p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~---~~--~~~~~~~la~~L~~~~~~ 132 (474)
T PLN02624 58 PVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR---AF--YNDKFPEFAEYLTSMFGY 132 (474)
T ss_pred CceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc---cc--CCHHHHHHHHHHHhhcCC
Confidence 6788999999999 599999999764 223334 489999999999999765432 12 358889999999999999
Q ss_pred CcEEEEcchHHHHHhhhhhhcc-----C----C--CEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHH
Q 013461 170 PDSILYSYGLSTMFSAIPCFCK-----K----G--DLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMD 226 (442)
Q Consensus 170 e~~i~~~sG~~a~~~ai~a~~~-----~----g--d~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~ 226 (442)
+++++++||++|++.|++.... + + .+|.+...+|+.+...+.+++- .+..++++|.+
T Consensus 133 ~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (474)
T PLN02624 133 DMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLD 212 (474)
T ss_pred CeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHH
Confidence 9999999999999999964321 1 2 3567778899887776665431 24567889999
Q ss_pred HHHHHHHhhcccccc--------------------------------------cccccccccCCCccc-cccCCCCCcee
Q 013461 227 SLRNTLERVTADNKR--------------------------------------SNSFGVLGRSGRGLT-EHCGVPVDKID 267 (442)
Q Consensus 227 ~Le~~l~~~~~~~~~--------------------------------------a~~~g~~G~~g~g~~-~~~~v~~~~~d 267 (442)
.+++.++........ .|. | +|++|.+.. +++++.| |
T Consensus 213 ~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G-~GrtG~~~a~~~~~i~p---D 287 (474)
T PLN02624 213 ALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-G-LARTGKMLACDWEEVRP---D 287 (474)
T ss_pred HHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-cCcCcchhhHHhcCCCC---C
Confidence 999988753221110 222 2 455665443 4567765 4
Q ss_pred EEEEeccccccCC---CcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhc
Q 013461 268 IVTAAMGHALATE---GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 344 (442)
Q Consensus 268 iii~S~sK~lg~~---GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~ 344 (442)
++ +|||++|.+ .|++++++++++.+.......+| +.+|+.++++.++|+.+++. ++.+++.++.+++++.|.
T Consensus 288 iv--~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~--~g~pl~~aaa~aaLe~l~~~-~l~~~~~~~~~~l~~~L~ 362 (474)
T PLN02624 288 VV--ILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTF--GGNPLASAVAMAALQVVQDE-KLAERSAKLGQELRDQLQ 362 (474)
T ss_pred EE--EecccccCCCCcceeeeecHHHHhHhccCCcCCCC--CCCHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHH
Confidence 44 489999754 37788898888876543222222 45899999999999988754 477888888899988887
Q ss_pred cC----CC-ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCC
Q 013461 345 DI----HG-LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHS 419 (442)
Q Consensus 345 ~~----~g-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t 419 (442)
++ +. +... .+.+.++.+.+..+.. +.....++++. |.++||++.+.. +..|||+++..+|
T Consensus 363 ~l~~~~~~~i~~v-rg~G~~~~i~l~~~~~----~~~~a~~~~~~-L~e~GV~v~p~~---------~~~lR~~p~l~~t 427 (474)
T PLN02624 363 KIQKQFPKLIKEV-RGRGLLNAVVLNSPKL----GPVSAYDVCLK-LKERGLLAKPTH---------DTIIRLAPPLSIS 427 (474)
T ss_pred HHHHhCCCceEEE-EeeEEEEEEEecCCCc----ChHHHHHHHHH-HHhCCeEEecCC---------CCEEEEECCccCC
Confidence 64 11 2111 2356677777743210 11234567776 456799997642 2349999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013461 420 EADLVKACESLKRISAVV 437 (442)
Q Consensus 420 ~eei~~~i~~l~~~~~~~ 437 (442)
++||++++++|++++..-
T Consensus 428 ~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 428 EDELQECSKALSDVLEHD 445 (474)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988653
No 53
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.96 E-value=2.1e-27 Score=220.85 Aligned_cols=332 Identities=16% Similarity=0.107 Sum_probs=234.2
Q ss_pred hcCCCCCcccccccccCCCeeecCCCCeEEE-CCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccC
Q 013461 76 WVPESLIPPIIEEMRCEPPVLESAAGPHTII-SGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGT 152 (442)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~ 152 (442)
|..+++-|.+... +..|++|.+++|.|+++ +|++|||+-++ ....++ +||+|.+++.+++.+.-..+.+ | .
T Consensus 17 ~~~~~ls~~~~~~-~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~----~-~ 90 (442)
T KOG1404|consen 17 KRRAFLSPGLTSY-YKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSG----Y-L 90 (442)
T ss_pred HhhhcCCcceecc-ccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeecc----c-c
Confidence 3344454444332 45689999999999995 99999998544 434444 5899999999999774333222 2 2
Q ss_pred cHHHHHHHHHHHhhhC--CCcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhcCCeEEEec--C---
Q 013461 153 IDVHLDCEARIAKFLG--TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK--H--- 222 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g--~e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~--~--- 222 (442)
.+...+++++|++.+. ...++|++||++||+.+++ .+.+.-|+|.....+|+.+...+.+++......+ .
T Consensus 91 ~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~ 170 (442)
T KOG1404|consen 91 NPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVAS 170 (442)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCC
Confidence 4555677777777665 3567888999999999885 4578889999999999999888877765433221 0
Q ss_pred ----------------CC---------HHHHHHHHHhhcccccc------------------------------------
Q 013461 223 ----------------ND---------MDSLRNTLERVTADNKR------------------------------------ 241 (442)
Q Consensus 223 ----------------~d---------~~~Le~~l~~~~~~~~~------------------------------------ 241 (442)
++ .+++++.+....++...
T Consensus 171 ~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~I 250 (442)
T KOG1404|consen 171 GVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFI 250 (442)
T ss_pred cccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEE
Confidence 01 13455555443332211
Q ss_pred ----cccccccccCCCccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHH
Q 013461 242 ----SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAA 315 (442)
Q Consensus 242 ----a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa 315 (442)
+.+||++| +-+| ++++|+.|| +.||+|++|. +-|.++.++|+.+-+..... +.++.+.+|++|+++
T Consensus 251 aDEVqtGfGRtG-~~wg-fe~h~v~PD-----IvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~-~fnTyggnP~a~avg 322 (442)
T KOG1404|consen 251 ADEVQTGFGRTG-HMWG-FESHGVVPD-----IVTMAKGIGNGFPLGAVVTTPEIADVLNQKSS-HFNTYGGNPVACAVG 322 (442)
T ss_pred ehhhhhcccccc-cccc-ccccCCCcc-----HHHHHhhccCCCcceeeecCHHHHHHHHhccc-cccccCCCchhHHHH
Confidence 67788877 5554 467888886 6789999974 34788999999998876652 445556699999999
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHhhccC-CCceeecC--CCCCEEEEEecCCC-CCchhhHHHHHHHHHHHHHhCCE
Q 013461 316 ITAIDVLEENPDLITKLKKNTAILRTGLSDI-HGLSIASN--PESPIVFLILEKST-GSMKNDLQLLEDIADWALKEDGV 391 (442)
Q Consensus 316 ~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~-~g~~~~~~--~~~~i~~~~~~~~~-~~~~~~~~~~~~i~~~~L~~~GV 391 (442)
+++|++++++ .++++..+.+.+|.+.|.++ ++.++.++ ..+-++.+.+-++. ...+++......+.++|. +.|+
T Consensus 323 ~aVL~Vikee-~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~ck-e~Gv 400 (442)
T KOG1404|consen 323 LAVLKVIKEE-NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCK-ELGV 400 (442)
T ss_pred HHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHH-HhCe
Confidence 9999999875 49999999999999999876 34555543 34567777765443 222334444556777655 5699
Q ss_pred EEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 392 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 392 ~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
+|..+.... ..+||+++..+|+||+|.+++..
T Consensus 401 lvg~g~i~G-------~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 401 LVGKGGIHG-------NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eeecccccc-------eEEEecCCeeccHHHHHHHHHHH
Confidence 996654422 24999999999999998887765
No 54
>PRK06062 hypothetical protein; Provisional
Probab=99.96 E-value=1.1e-26 Score=233.97 Aligned_cols=321 Identities=16% Similarity=0.174 Sum_probs=220.9
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ....++ +||+|.+|+++++++...... .-..+...+|.++|+++.+
T Consensus 35 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-----~~~~~~~~~lae~L~~~~p 109 (451)
T PRK06062 35 NPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP-----AHANDARSEAARLIAERAP 109 (451)
T ss_pred CCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC-----ccCCHHHHHHHHHHHHhCC
Confidence 46789999999999 599999999654 334444 489999999999998533221 1246778899999999875
Q ss_pred --CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCCe-----------EEEe--c------C--
Q 013461 169 --TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRST-----------VVYF--K------H-- 222 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-----------v~~~--~------~-- 222 (442)
.+++.+++||++|++.|++. +.+|..+|.+...+|+.+..++.+++.. +..+ + .
T Consensus 110 ~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 189 (451)
T PRK06062 110 GDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHA 189 (451)
T ss_pred CCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCC
Confidence 46889999999999999964 4577788999999999988777665421 1111 1 1
Q ss_pred -CC-------HHHHHHHHHhhcccc-cc---------------------------------------cccccccccCCCc
Q 013461 223 -ND-------MDSLRNTLERVTADN-KR---------------------------------------SNSFGVLGRSGRG 254 (442)
Q Consensus 223 -~d-------~~~Le~~l~~~~~~~-~~---------------------------------------a~~~g~~G~~g~g 254 (442)
+| +++++++++...... .. ..+ +|++|.+
T Consensus 190 ~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tG---fGRtG~~ 266 (451)
T PRK06062 190 TTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAG---FGRTGKW 266 (451)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccC---CCcCcHH
Confidence 23 567777775421111 00 222 3556655
Q ss_pred -cccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHH
Q 013461 255 -LTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLIT 330 (442)
Q Consensus 255 -~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~ 330 (442)
..+++|+.|| +.+|+|++|. +.|.+++++++++.+........++.+.+|+.|++++++|+++++.+ +.+
T Consensus 267 ~a~~~~gv~PD-----i~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~-l~~ 340 (451)
T PRK06062 267 FAIEHFGVVPD-----LITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEG-IVE 340 (451)
T ss_pred HHHHhcCCCCC-----eeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcC-HHH
Confidence 4688999885 4569999973 34667788899998863321122233458999999999999997754 888
Q ss_pred HHHHHH-HHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchh------hHHHHHHHHHHHHHhCCEEEeeccCcc
Q 013461 331 KLKKNT-AILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKN------DLQLLEDIADWALKEDGVFVVTSKRSM 400 (442)
Q Consensus 331 ~l~~~~-~~l~~~L~~~~-g~~~~--~~~~~~i~~~~~~~~~~~~~~------~~~~~~~i~~~~L~~~GV~v~~~~~~~ 400 (442)
++++++ +++++.|+++. ..+.. ....+.++.+.+..+.....+ ......++...++ ++||++.+.
T Consensus 341 ~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~---- 415 (451)
T PRK06062 341 NAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFVN---- 415 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEeec----
Confidence 899888 58888887641 12211 123456777777432110000 0123456777655 569997642
Q ss_pred cccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 401 LDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 401 ~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+.+|++++..+|++||++++++++++++++
T Consensus 416 ------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 416 ------GNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred ------CCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 1349999999999999999999999998765
No 55
>PRK05965 hypothetical protein; Provisional
Probab=99.96 E-value=4.2e-26 Score=230.31 Aligned_cols=327 Identities=17% Similarity=0.161 Sum_probs=222.2
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.+.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+.+++++....+. .+.-..+...+|.++|++.++
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~p 104 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATG---YFHFGSEPAIRLAAKLAERAP 104 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccc---ccccCCHHHHHHHHHHHhhCC
Confidence 36789999999999 599999999554 444444 489999999999998543221 111245777899999999874
Q ss_pred --CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEE--ecC-
Q 013461 169 --TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVY--FKH- 222 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~--~~~- 222 (442)
.+++++++||++|++.|++... +|..+|.++..+|+.+..++.+++.. +.. ++.
T Consensus 105 ~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~ 184 (459)
T PRK05965 105 GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYP 184 (459)
T ss_pred CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcc
Confidence 4678888999999999997432 24457889999999877666554321 111 121
Q ss_pred ------CCH--------HHHHHHHHhhc-ccccc---------------------------------------ccccccc
Q 013461 223 ------NDM--------DSLRNTLERVT-ADNKR---------------------------------------SNSFGVL 248 (442)
Q Consensus 223 ------~d~--------~~Le~~l~~~~-~~~~~---------------------------------------a~~~g~~ 248 (442)
+|. +++++.++... +.... ..+||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRt 264 (459)
T PRK05965 185 YRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRT 264 (459)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccC
Confidence 232 46777776432 11110 4445554
Q ss_pred ccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhC-----CceeccCCCcHHHHHHHHHHHH
Q 013461 249 GRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSS-----SGYVFSASLPPYLASAAITAID 320 (442)
Q Consensus 249 G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~-----~~~~~s~s~~p~~aaaa~aal~ 320 (442)
|+ .+..+++|+.|| | .+|+|++|. +-|.+++++++++.+.... .....+.+.+|+.|++++++|+
T Consensus 265 G~--~~a~~~~gv~PD---i--v~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 337 (459)
T PRK05965 265 GP--LFACEAEGVVPD---L--MTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR 337 (459)
T ss_pred ch--hhhHhhcCCCCC---e--EEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHH
Confidence 43 245688999885 4 459999962 2366889999998775321 1122344569999999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEEee
Q 013461 321 VLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFVVT 395 (442)
Q Consensus 321 ~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v~~ 395 (442)
+++++ ++.++.++++++|.+.|+++....+.. ...+.++.+.+..+.... ..+.....++.+.+++ +||++.+
T Consensus 338 ~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gll~~~ 415 (459)
T PRK05965 338 LYHEG-GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYA-NGLVFRA 415 (459)
T ss_pred HHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHh-CCeEEEe
Confidence 99875 488999999999999998753222211 234566777764321111 1112234567776554 5999875
Q ss_pred ccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 396 SKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 396 ~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
... ..||++++..+|++||+++++++.++++++..
T Consensus 416 ~g~---------~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 416 FGD---------GVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred cCC---------cEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 321 23999999999999999999999999987643
No 56
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=1.4e-26 Score=233.60 Aligned_cols=322 Identities=17% Similarity=0.236 Sum_probs=220.6
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ....++ +||+|.+|+.++++++... + ......+...++.++|++.++
T Consensus 38 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~---~~~~~~~~~~~la~~l~~~~p 113 (443)
T PRK06058 38 LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHT-C---FMVTPYEGYVAVAEQLNRLTP 113 (443)
T ss_pred CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCc-c---ccccCCHHHHHHHHHHHHhCC
Confidence 36789999999999 599999999654 334444 4899999999999985321 1 122346788899999999875
Q ss_pred C---CcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhcCC-------------eEEE----ecCCCH
Q 013461 169 T---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVY----FKHNDM 225 (442)
Q Consensus 169 ~---e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~g~-------------~v~~----~~~~d~ 225 (442)
. +++++++||++|++.|++ .+.++..+|.++..+|+.+..++.+++. .+.. ++.++.
T Consensus 114 ~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK06058 114 GDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDP 193 (443)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccc
Confidence 2 578999999999999997 5678878888999999998877765531 1111 122221
Q ss_pred --------HHHHHHHH---hh-c-ccccc---------------------------------------cccccccccCCC
Q 013461 226 --------DSLRNTLE---RV-T-ADNKR---------------------------------------SNSFGVLGRSGR 253 (442)
Q Consensus 226 --------~~Le~~l~---~~-~-~~~~~---------------------------------------a~~~g~~G~~g~ 253 (442)
+.+++.++ +. . +.... ..+||+.|. .
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~--~ 271 (443)
T PRK06058 194 KGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGA--W 271 (443)
T ss_pred cccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChh--h
Confidence 22222222 11 1 11000 334444332 2
Q ss_pred ccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHH
Q 013461 254 GLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITK 331 (442)
Q Consensus 254 g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~ 331 (442)
+..+++|+.|| |+ +++|++|. +.|++++++++++.+....+. .+.+.+|+.|++++++|+.+++. ++.++
T Consensus 272 fa~~~~gv~PD---iv--~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~--~T~~gnpl~~aaa~a~L~~~~~~-~l~~~ 343 (443)
T PRK06058 272 FACEHEGIVPD---LI--TTAKGIAGGLPLSAVTGRAEIMDAPHPGGLG--GTYGGNPVACAAALAAIETIEED-DLVAR 343 (443)
T ss_pred hHHHhcCCCCC---EE--EEcccccCCCccEEEEEcHHHHhhccCCCCC--CCCCCCHHHHHHHHHHHHHHHHc-CHHHH
Confidence 34578899874 44 58999972 236789999999887644333 34456999999999999998764 48899
Q ss_pred HHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 332 LKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 332 l~~~~~~l~~~L~~~~-g~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
+++++++|.+.|+++. ...+. ....+.++.+.+..+.. ..++......+.+.+++ +||++.+.... .+
T Consensus 344 ~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~-------~~ 414 (443)
T PRK06058 344 ARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGT-TEPDAELTKALAAAAHA-AGVIVLTCGTY-------GN 414 (443)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCC-CCCcHHHHHHHHHHHHH-CCeEEeccCCC-------CC
Confidence 9999999999998752 12221 12456777777743211 11233345567776554 59999764321 13
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.||+.++..+|++||++++++|++++++
T Consensus 415 ~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 415 VIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 5999999999999999999999998764
No 57
>PRK07678 aminotransferase; Validated
Probab=99.96 E-value=5.5e-26 Score=229.19 Aligned_cols=328 Identities=13% Similarity=0.125 Sum_probs=219.1
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+.+++++...... ....+...+|.++|++.++.
T Consensus 30 p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~lae~l~~~~~~ 104 (451)
T PRK07678 30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL-----TQSHEPAIKLAEKLNEWLGG 104 (451)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc-----ccCCHHHHHHHHHHHHhCCC
Confidence 5788999999999 599999999554 334444 489999999999998533221 12356678999999999864
Q ss_pred -CcEEEEcchHHHHHhhhhhh---c------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecC-----
Q 013461 170 -PDSILYSYGLSTMFSAIPCF---C------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKH----- 222 (442)
Q Consensus 170 -e~~i~~~sG~~a~~~ai~a~---~------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~----- 222 (442)
+.+++++||++|++.|++.. . +|..+|.+...+|+.+..++.+++.. +..++.
T Consensus 105 ~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (451)
T PRK07678 105 EYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYR 184 (451)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcccc
Confidence 46778899999999999753 2 34457888999999887777665421 111211
Q ss_pred ---------CCH---HHHHHHHHhh-cccccc---------------------------------------ccccccccc
Q 013461 223 ---------NDM---DSLRNTLERV-TADNKR---------------------------------------SNSFGVLGR 250 (442)
Q Consensus 223 ---------~d~---~~Le~~l~~~-~~~~~~---------------------------------------a~~~g~~G~ 250 (442)
+|. ++++++++.. .+.... ..+||+.|+
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 264 (451)
T PRK07678 185 MPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK 264 (451)
T ss_pred ccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch
Confidence 111 2355556422 111100 345554442
Q ss_pred CCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCC----ceeccCCCcHHHHHHHHHHHHHHh
Q 013461 251 SGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS----GYVFSASLPPYLASAAITAIDVLE 323 (442)
Q Consensus 251 ~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~----~~~~s~s~~p~~aaaa~aal~~l~ 323 (442)
.+..+++|+.|| |+ +|+|++|. +-|.+++++++++.+..... .+..+.+.+|+.|++++++|++++
T Consensus 265 --~~~~~~~gv~PD---iv--t~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~ 337 (451)
T PRK07678 265 --AFGFMNYGVKPD---II--TMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIME 337 (451)
T ss_pred --hHHHHhcCCCCC---EE--EeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHH
Confidence 334578999885 44 69999973 23568899999988764211 123344569999999999999998
Q ss_pred cChHHHHHHHHHHHHHHHhhccC-CCceee--cCCCCCEEEEEecCCCCCc-hhhHHHHHHHHHHHHHhCCEEEeeccCc
Q 013461 324 ENPDLITKLKKNTAILRTGLSDI-HGLSIA--SNPESPIVFLILEKSTGSM-KNDLQLLEDIADWALKEDGVFVVTSKRS 399 (442)
Q Consensus 324 ~~~~~~~~l~~~~~~l~~~L~~~-~g~~~~--~~~~~~i~~~~~~~~~~~~-~~~~~~~~~i~~~~L~~~GV~v~~~~~~ 399 (442)
+. ++.++++++.++|++.|+++ ....+. ....+.++.+.+..+.... +.+.....++...++ ++||++.+.. +
T Consensus 338 ~~-~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~Gv~~~~~g-~ 414 (451)
T PRK07678 338 NE-NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACK-EKGLIIGKNG-D 414 (451)
T ss_pred hC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCCcEEeecC-c
Confidence 65 48899999999999988643 111111 1235677888875322111 112334567777655 4699986532 2
Q ss_pred ccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 400 MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 400 ~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.++.. .+.||++++..+|++||+++++++++++.++
T Consensus 415 ~v~~~--~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 415 TVAGY--NNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred cccCC--CCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 21110 1359999999999999999999999998754
No 58
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.96 E-value=2.1e-26 Score=231.47 Aligned_cols=318 Identities=16% Similarity=0.187 Sum_probs=222.5
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ...+++ +||+|.+|++++++++...... .-+.+...++.++|++.++
T Consensus 24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~~~~la~~l~~~~p 99 (423)
T PRK05964 24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFA----GFTHEPAERLAQRLVALTP 99 (423)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccc----ccCCHHHHHHHHHHHHhCC
Confidence 46789999999999 599999999654 333444 4899999999999985432210 1135777899999999885
Q ss_pred --CCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcC--------------CeEEEecCC
Q 013461 169 --TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSR--------------STVVYFKHN 223 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g--------------~~v~~~~~~ 223 (442)
.+++.+++||++|++.|++.. .+|..+|.+...+|+.+...+.+++ ...+.++++
T Consensus 100 ~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (423)
T PRK05964 100 GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD 179 (423)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc
Confidence 578999999999999999754 3456688899999998766665443 233456666
Q ss_pred C-----HHHHHHHHHhhcccccc-----------------------------ccc---------ccccccCCCcc-cccc
Q 013461 224 D-----MDSLRNTLERVTADNKR-----------------------------SNS---------FGVLGRSGRGL-TEHC 259 (442)
Q Consensus 224 d-----~~~Le~~l~~~~~~~~~-----------------------------a~~---------~g~~G~~g~g~-~~~~ 259 (442)
| .+++++.+++..+.... .|+ .| +|++|.+. .+++
T Consensus 180 d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg-~gr~G~~~a~~~~ 258 (423)
T PRK05964 180 GYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATG-FGRTGTLFACEQA 258 (423)
T ss_pred hhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC-CCcCcchhHHHhc
Confidence 7 77888888643221100 111 12 34555543 4778
Q ss_pred CCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhh--CCceecc--CCCcHHHHHHHHHHHHHHhcChHHHHHH
Q 013461 260 GVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS--SSGYVFS--ASLPPYLASAAITAIDVLEENPDLITKL 332 (442)
Q Consensus 260 ~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~--~~~~~~s--~s~~p~~aaaa~aal~~l~~~~~~~~~l 332 (442)
++.|| | .+++|+++. +.|++++++++++.+... ...+.++ .+.+|+.++++.++++++++.+ +.+++
T Consensus 259 ~v~pD---i--~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~-~~~~~ 332 (423)
T PRK05964 259 GVSPD---I--MCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEP-VLERV 332 (423)
T ss_pred CCCCC---e--eeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcC-HHHHH
Confidence 88774 4 469999953 246789999999987532 1122232 2468999999999999987644 78999
Q ss_pred HHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCce
Q 013461 333 KKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGI 410 (442)
Q Consensus 333 ~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~i 410 (442)
+++.+++++.|+++..++... ...+.++.+.+..+.. .....++.+.+ .++||++.+.. +.+
T Consensus 333 ~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-----~~~~~~l~~~l-~~~Gv~v~~~~----------~~l 396 (423)
T PRK05964 333 AALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL-----ERDGPALRAFA-LERGVLLRPLG----------NTI 396 (423)
T ss_pred HHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc-----hhHHHHHHHHH-HHCCeEEEecC----------CEE
Confidence 999999999987763332211 2356677777743210 01234667654 45699997642 239
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 411 RLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 411 Ri~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
|++++..+|++|||++++++++++++
T Consensus 397 R~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 397 YLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998865
No 59
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.96 E-value=5.4e-27 Score=234.33 Aligned_cols=311 Identities=15% Similarity=0.158 Sum_probs=219.0
Q ss_pred CeeecCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 94 PVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 94 ~~~~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
.++++++|.++| .|||+||||.++ ..+|+ +||+|.+|+++++++...... ..-+.+...+|.++|++..+
T Consensus 27 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~~----~~~~~~~~~~la~~L~~~~p~ 101 (428)
T PRK07986 27 YPVVSAEGCELILADGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMF----GGITHPPAIELCRKLVAMTPQ 101 (428)
T ss_pred eeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCC-CCHHHHHHHHHHHhhcCCccc----cccCCHHHHHHHHHHHhhCCC
Confidence 568999999999 599999999654 33455 479999999999998543221 11246778899999999886
Q ss_pred -CCcEEEEcchHHHHHhhhhhhc--------cCCCEEEeCCCchHHHHHHHHhcCCe-------------EEE-------
Q 013461 169 -TPDSILYSYGLSTMFSAIPCFC--------KKGDLIVADEGVHWGIQNGLYLSRST-------------VVY------- 219 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a~~--------~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~------- 219 (442)
.+++++++||++|++.|++... +|..+|.+...+|+.+..++.+++.. +..
T Consensus 102 ~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 181 (428)
T PRK07986 102 PLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSR 181 (428)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcc
Confidence 3688999999999999997432 35678899999999877666654421 111
Q ss_pred ----ecCCCHHHHHHHHHhhcccccc---------------------------------------cccccccccCCCc-c
Q 013461 220 ----FKHNDMDSLRNTLERVTADNKR---------------------------------------SNSFGVLGRSGRG-L 255 (442)
Q Consensus 220 ----~~~~d~~~Le~~l~~~~~~~~~---------------------------------------a~~~g~~G~~g~g-~ 255 (442)
+.+||++++++.++........ .| .| +|++|.+ .
T Consensus 182 ~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG-~GrtG~~fa 259 (428)
T PRK07986 182 FDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TG-FGRTGKLFA 259 (428)
T ss_pred cchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-CccCCCeee
Confidence 1245777888888643211100 22 34 3677766 4
Q ss_pred ccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCC---ceeccCCCcHHHHHHHHHHHHHHhcChHHH
Q 013461 256 TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS---GYVFSASLPPYLASAAITAIDVLEENPDLI 329 (442)
Q Consensus 256 ~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~---~~~~s~s~~p~~aaaa~aal~~l~~~~~~~ 329 (442)
.+++|+.| ||+ +|+|++|. +.|.+++++++++.+..... ....+.+.+|+.|+++.++|+++++. +++
T Consensus 260 ~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~-~~~ 333 (428)
T PRK07986 260 CEHAGIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG-DWQ 333 (428)
T ss_pred ecccCCCC---CEE--EechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC-CHH
Confidence 57899987 555 59999961 22345788999998865321 11223346899999999999999865 479
Q ss_pred HHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCC
Q 013461 330 TKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 407 (442)
Q Consensus 330 ~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~ 407 (442)
++++++.++|++.|+++...+..+ ...+.++.+.+..+. ...++.+.++ ++||++.+..
T Consensus 334 ~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~--------~~~~~~~~l~-~~Gl~~~~~g---------- 394 (428)
T PRK07986 334 QQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV--------NMAALQRFFV-EQGVWIRPFG---------- 394 (428)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc--------cHHHHHHHHH-HCCcEEEecC----------
Confidence 999999999999998752222211 124667777774321 1235666554 5699987642
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 408 VGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 408 ~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..||++++..+|++||++++++|++++.+
T Consensus 395 ~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 395 KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 23999999999999999999999998754
No 60
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.95 E-value=5e-26 Score=229.31 Aligned_cols=318 Identities=16% Similarity=0.209 Sum_probs=219.4
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ....++ +||+|.+++.+++++. ... ....+...+|.++|++.++
T Consensus 81 ~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~-~~~------~~~~~~~~~lAe~l~~~~p 153 (474)
T PLN02482 81 QPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKG-TSF------GAPCLLENVLAEMVIDAVP 153 (474)
T ss_pred CCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhC-CCC------CCCCHHHHHHHHHHHHhCC
Confidence 36778999999999 599999999554 334444 4899999999999873 221 1245777889999998875
Q ss_pred -CCcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHH--HHHhc-----------C------CeEEEecCCCH
Q 013461 169 -TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQN--GLYLS-----------R------STVVYFKHNDM 225 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~--~~~l~-----------g------~~v~~~~~~d~ 225 (442)
.+.+.+++||++|++.|++ ++++|..+|.+...+|+.... ....+ + ..++.+++||+
T Consensus 154 ~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~ 233 (474)
T PLN02482 154 SVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDL 233 (474)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCCh
Confidence 6889999999999999996 456788888899999985421 11100 1 13567889999
Q ss_pred HHHHHHHHhhcccccc----------------------------ccc---------ccc-cccCCCccccccCCCCCcee
Q 013461 226 DSLRNTLERVTADNKR----------------------------SNS---------FGV-LGRSGRGLTEHCGVPVDKID 267 (442)
Q Consensus 226 ~~Le~~l~~~~~~~~~----------------------------a~~---------~g~-~G~~g~g~~~~~~v~~~~~d 267 (442)
++++++++........ .|+ .|+ .| ..|..+++|+.||
T Consensus 234 ~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g--~~ga~~~~gv~PD--- 308 (474)
T PLN02482 234 EAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIA--YGGAQEYFGITPD--- 308 (474)
T ss_pred HHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecC--cchHhHHhCCCCC---
Confidence 9999998754221110 111 222 22 2355678999875
Q ss_pred EEEEeccccccC--CCcEEEcCHHhHHHHHhhCCcee-ccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhc
Q 013461 268 IVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYV-FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 344 (442)
Q Consensus 268 iii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~-~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~ 344 (442)
| .||+|++|. +-|.+++++++++.+...+..+. .+.+.+|+.+++++++|+++++ +++.++++++.++|++.|+
T Consensus 309 i--~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~~~~~~~~~~g~~l~~~L~ 385 (474)
T PLN02482 309 L--TTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-PGTYEYLDKITKKLIQGIL 385 (474)
T ss_pred E--EEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHH
Confidence 4 579999973 23567899999998864322222 2224589999999999999976 4589999999999999997
Q ss_pred cC---CCceeecCCCCCEEEEEecCCCC-C----chhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecC
Q 013461 345 DI---HGLSIASNPESPIVFLILEKSTG-S----MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSA 416 (442)
Q Consensus 345 ~~---~g~~~~~~~~~~i~~~~~~~~~~-~----~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~ 416 (442)
++ .++++......+++.+.+..+.. . ...+.....++...+++ +||++.+..++. + .++.
T Consensus 386 ~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~~~~----------~-~psl 453 (474)
T PLN02482 386 EAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQFEA----------G-FTSL 453 (474)
T ss_pred HHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccCCCC----------C-cCCC
Confidence 65 13343322234477776643210 0 01123345567776665 599998754421 1 3788
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 013461 417 AHSEADLVKACESLKRISAV 436 (442)
Q Consensus 417 ~~t~eei~~~i~~l~~~~~~ 436 (442)
.||++|||++++++++++.+
T Consensus 454 ~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 454 AHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 89999999999999998864
No 61
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=7.3e-26 Score=228.07 Aligned_cols=325 Identities=16% Similarity=0.192 Sum_probs=223.5
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| .||++||||.++ ....++ +||+|.+|+++++++...... .+.+.+...+|.++|++..+
T Consensus 35 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~p 110 (457)
T PRK05639 35 FPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMI----GYTHSERAIRVAEKLAEISP 110 (457)
T ss_pred CCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccccc----CccCCHHHHHHHHHHHhhCC
Confidence 36789999999999 599999999654 334444 489999999999998532221 12235777889999999876
Q ss_pred C--CcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC-------------eEEEecCCC------
Q 013461 169 T--PDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKHND------ 224 (442)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~-------------~v~~~~~~d------ 224 (442)
. +++.+++||++|++.|++. +.++..+|.+...+|+.+..++.+++. .+.++++++
T Consensus 111 ~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 190 (457)
T PRK05639 111 IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPW 190 (457)
T ss_pred CCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccc
Confidence 3 6889999999999999964 457777888999999988777765431 133344332
Q ss_pred -------HH--------HHHHHHHhh---cccccc----------------------------ccc---------ccccc
Q 013461 225 -------MD--------SLRNTLERV---TADNKR----------------------------SNS---------FGVLG 249 (442)
Q Consensus 225 -------~~--------~Le~~l~~~---~~~~~~----------------------------a~~---------~g~~G 249 (442)
.+ .+++.+... ...... .|+ .| +|
T Consensus 191 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG-~G 269 (457)
T PRK05639 191 GINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTG-IG 269 (457)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc-cC
Confidence 22 234433211 111100 111 13 45
Q ss_pred cCCCc-cccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcCh
Q 013461 250 RSGRG-LTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENP 326 (442)
Q Consensus 250 ~~g~g-~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~ 326 (442)
++|.+ ..+++|+.| ||++ |+|++|. +-|++++++++++. .. ..+.++.+.+|+.+++++++|+++++.
T Consensus 270 rtG~~~a~~~~gv~P---Div~--~gK~l~gG~pi~av~~~~~i~~~-~~--~~~~~T~~g~p~~~aaa~a~l~~l~~~- 340 (457)
T PRK05639 270 RTGKWFASEWFEVKP---DLII--FGKGVASGMGLSGVIGRKELMDL-TS--GSALLTPAANPVISAAAEATLEIIEEE- 340 (457)
T ss_pred cCchHHHHHhcCCCC---CEEE--echhhcCCCcceeEEehHHHHhh-cC--CCcccCCCcCHHHHHHHHHHHHHHHHc-
Confidence 66665 457899987 4555 9999963 23788999999883 22 233456677999999999999999765
Q ss_pred HHHHHHHHHHHHHHHhhccC-CCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc
Q 013461 327 DLITKLKKNTAILRTGLSDI-HGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK 403 (442)
Q Consensus 327 ~~~~~l~~~~~~l~~~L~~~-~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~ 403 (442)
++.++.++++++|++.|+++ .+.++.. ...+.++.+.+..+... ++......+.+.+++ +|+++.+....
T Consensus 341 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~--~~~~~~~~~~~~~~~-~Gv~~~~~g~~---- 413 (457)
T PRK05639 341 NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGK--PDPELTGKICWRAFE-LGLILPSYGMF---- 413 (457)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCC--CCHHHHHHHHHHHHh-CCeEEeecCCC----
Confidence 47889999999999999874 2222221 23456777776432211 122345567776554 59998764211
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 404 CRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 404 ~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
++.||+.++..+|++|+|+++++|+++++++.++
T Consensus 414 ---~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~~~ 447 (457)
T PRK05639 414 ---GNVIRITPPLVITKEIAEKGLEIMERAIKDALAG 447 (457)
T ss_pred ---CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 2459999999999999999999999999876543
No 62
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=9.2e-26 Score=226.88 Aligned_cols=324 Identities=18% Similarity=0.181 Sum_probs=223.1
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+.+++.+....+. .+.+.+...+|.++|++..+
T Consensus 23 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~la~~L~~~~p 98 (443)
T PRK08360 23 YPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTP----IYGFPVEPLLLAEKLIEIAP 98 (443)
T ss_pred CCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhCC
Confidence 36789999999999 599999999554 334444 489999999999998543221 23346778899999999886
Q ss_pred C--CcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCC--------
Q 013461 169 T--PDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHN-------- 223 (442)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~-------- 223 (442)
. +++++++||++|++.|++. +.+|..+|.+...+|+.+..++.+++. .+..++++
T Consensus 99 ~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK08360 99 GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFG 178 (443)
T ss_pred CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCcccccccc
Confidence 4 5788899999999999964 467888888999999987766665442 12222222
Q ss_pred ---------CHHHHHHHHHhh-c-ccccc----------------------------ccccc--------ccccCCCcc-
Q 013461 224 ---------DMDSLRNTLERV-T-ADNKR----------------------------SNSFG--------VLGRSGRGL- 255 (442)
Q Consensus 224 ---------d~~~Le~~l~~~-~-~~~~~----------------------------a~~~g--------~~G~~g~g~- 255 (442)
+.+.+++.++.. . ++.+. .|+.- -+|++|.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a 258 (443)
T PRK08360 179 KEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFA 258 (443)
T ss_pred CchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchh
Confidence 223455555431 1 11100 11110 034455543
Q ss_pred ccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHH
Q 013461 256 TEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLK 333 (442)
Q Consensus 256 ~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~ 333 (442)
.+++++.| |++ ||||++|. +.|++++++++++.+.... +.++.+.+|+.++++.++|+.+++. ++.++++
T Consensus 259 ~~~~~~~p---Dii--tlsK~l~~G~pigav~~~~~i~~~~~~~~--~~~T~~~~p~~~aaa~a~l~~l~~~-~l~~~~~ 330 (443)
T PRK08360 259 IEHFGVEP---DII--TLGKPLGGGLPISATIGRAEIMDSLPPLA--HAFTLSGNPVASAAALAVIEEIEEK-NLLKRAE 330 (443)
T ss_pred hhhcCCCC---CEE--EecccccCCceeEEEEEcHHHHhhhcCCC--CCCCCCcCHHHHHHHHHHHHHHHHc-CHHHHHH
Confidence 46778876 444 68999973 2489999999999886432 3455567899999999999999765 4889999
Q ss_pred HHHHHHHHhhccC-CCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCce
Q 013461 334 KNTAILRTGLSDI-HGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGI 410 (442)
Q Consensus 334 ~~~~~l~~~L~~~-~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~i 410 (442)
++.++|++.|+++ ...++.. ...+.++.+.+..+.....++...+.++...++ ++||++.+... +.+
T Consensus 331 ~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~---------~~l 400 (443)
T PRK08360 331 KLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFFSG---------NVL 400 (443)
T ss_pred HHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeecCC---------CEE
Confidence 9999999998764 1122211 235667777774332111122334556777655 56999865322 349
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 411 RLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 411 Ri~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
|++++..+|++||++++++++++++++
T Consensus 401 r~~P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 401 RIQPPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998765
No 63
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.95 E-value=4.5e-26 Score=229.02 Aligned_cols=319 Identities=16% Similarity=0.145 Sum_probs=216.6
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
|.++++++|.|+| .||++||||.++ ...+++ +||+|.+|+.++++++...+. +....+...++.++|++.++
T Consensus 29 p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~p~ 104 (442)
T PRK13360 29 PRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA----FQMGHPKAFELANRIAEIAPG 104 (442)
T ss_pred CceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc----CCcCCHHHHHHHHHHHHhCCC
Confidence 5788999999999 599999999654 333444 489999999999998643321 11245777899999999874
Q ss_pred -CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCC---
Q 013461 169 -TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN--- 223 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~--- 223 (442)
.+++.+++||++|++.|++... +|..+|.+...+|+.+..++.+++.. +..++..
T Consensus 105 ~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~ 184 (442)
T PRK13360 105 GLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDL 184 (442)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchh
Confidence 5788999999999999997432 24467888999999877766555421 1222221
Q ss_pred ---------------CHHHHHHHHHhhccccc-c--------------------------------------c-cccccc
Q 013461 224 ---------------DMDSLRNTLERVTADNK-R--------------------------------------S-NSFGVL 248 (442)
Q Consensus 224 ---------------d~~~Le~~l~~~~~~~~-~--------------------------------------a-~~~g~~ 248 (442)
+.++||++++....... . . .++|++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt 264 (442)
T PRK13360 185 ARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL 264 (442)
T ss_pred hccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 13577777764321110 0 2 255544
Q ss_pred ccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCC-----ceeccCCCcHHHHHHHHHHHH
Q 013461 249 GRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS-----GYVFSASLPPYLASAAITAID 320 (442)
Q Consensus 249 G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~-----~~~~s~s~~p~~aaaa~aal~ 320 (442)
|+ .+..+++|+.|| | .+|+|++|. +.|.+++++++++.+..... ...++.+.+|+.++++.++|+
T Consensus 265 G~--~~a~~~~gv~PD---i--vt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~ 337 (442)
T PRK13360 265 GA--PFAAQYFGVTPD---L--LTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLD 337 (442)
T ss_pred cc--chhhhhcCCCCc---e--eeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 43 234678999875 4 479999963 24567889999987753211 112334469999999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccC
Q 013461 321 VLEENPDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR 398 (442)
Q Consensus 321 ~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~ 398 (442)
++++.+ +.++++++.+++++.|+++...+...+ ..+.+..+.+...... +...+.++.++++ ++||++.+..
T Consensus 338 ~l~~~~-l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~---~~~~~~~~~~~l~-~~Gvl~~~~~- 411 (442)
T PRK13360 338 LYEREG-LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGK---PGKRAYEVFLKCF-EKGLMIRYTG- 411 (442)
T ss_pred HHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCC---cchhHHHHHHHHH-HCCcEEEecC-
Confidence 998754 889999999999999986522221111 1233444555321111 1123456777655 4699987532
Q ss_pred cccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 399 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 399 ~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..+|++++..+|++|||+++++|+++++++
T Consensus 412 ---------~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 412 ---------DILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred ---------CEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 239999999999999999999999998765
No 64
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.95 E-value=5.5e-26 Score=227.52 Aligned_cols=317 Identities=21% Similarity=0.246 Sum_probs=224.8
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecCCCCC--CC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASANYLG--LI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~~~l~--~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
|.++.+++|.|+| .||++||||.++ |.+ ++ +||+|++++.+++++++..+ +.+ ..+.+.++++.++++++
T Consensus 14 ~~~~~~~~G~~~~d~dg~~~lD~~~~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~~~~~l~~~~~ 87 (400)
T PTZ00125 14 PVVLKRGKGVFVWDVEGKKYYDFLSA-YSAVNQGHCHPKILAALINQAQKLTLTS---RAF--YNDVLGLAEKYITDLFG 87 (400)
T ss_pred CccEEeeecCEEEeCCCCEEEEcccC-HhhccCCcCCHHHHHHHHHHHHhccccc---ccc--cCHHHHHHHHHHHhCCC
Confidence 5678899999999 599999999774 333 33 58999999999999876543 222 25688999999999999
Q ss_pred CCcEEEEcchHHHHHhhhhhhc-----------cCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCH
Q 013461 169 TPDSILYSYGLSTMFSAIPCFC-----------KKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDM 225 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~~-----------~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~ 225 (442)
.+++++++||++|++.+++... ++.++|.++..+|+.+..++.+++. .+..++++|+
T Consensus 88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 167 (400)
T PTZ00125 88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDV 167 (400)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCH
Confidence 9999999999999999998663 2456788999999998888776543 2356778899
Q ss_pred HHHHHHHHhhcccc--------------c----c--------cccccc--------cccCCCcc-ccccCCCCCceeEEE
Q 013461 226 DSLRNTLERVTADN--------------K----R--------SNSFGV--------LGRSGRGL-TEHCGVPVDKIDIVT 270 (442)
Q Consensus 226 ~~Le~~l~~~~~~~--------------~----~--------a~~~g~--------~G~~g~g~-~~~~~v~~~~~diii 270 (442)
+++++.++...... . . .|++-+ +|++|.+. .+++++.| |++
T Consensus 168 ~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~p---d~~- 243 (400)
T PTZ00125 168 EALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKP---DIV- 243 (400)
T ss_pred HHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCC---CEE-
Confidence 99999886211000 0 0 122111 24444433 23466654 454
Q ss_pred EeccccccCC---CcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC
Q 013461 271 AAMGHALATE---GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH 347 (442)
Q Consensus 271 ~S~sK~lg~~---GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~ 347 (442)
++||+++.+ .|++++++++++.+.......++ +.+|+.++++.++++.+++. .+.++++++.+++++.|.++.
T Consensus 244 -~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~i~~~-~~~~~~~~~~~~l~~~l~~l~ 319 (400)
T PTZ00125 244 -LLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTY--GGNPLACAVAVEALEVLKEE-KLAENAQRLGEVFRDGLKELL 319 (400)
T ss_pred -EEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 589999743 37899999999987643333233 45788888899999988654 367888888888888887641
Q ss_pred ---Cc-eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHH
Q 013461 348 ---GL-SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADL 423 (442)
Q Consensus 348 ---g~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei 423 (442)
++ ... .+.+.++++.+..+. .....++++.++ ++||.+.+.. +..+||+++..+|++|+
T Consensus 320 ~~~~~~~~~-~~~g~~~~v~~~~~~------~~~~~~~~~~l~-~~Gv~v~~~~---------~~~lRi~~~~~~~~~~i 382 (400)
T PTZ00125 320 KKSPWVKEI-RGKGLLNAIVFDHSD------GVNAWDLCLKLK-ENGLLAKPTH---------DNIIRFAPPLVITKEQL 382 (400)
T ss_pred hcCCCeEEE-ecccEEEEEEEccCc------chHHHHHHHHHH-HCCeEEeecC---------CCEEEEECCccCCHHHH
Confidence 22 112 235667777774321 122446777655 5699997642 23599999999999999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 013461 424 VKACESLKRISAVVLRD 440 (442)
Q Consensus 424 ~~~i~~l~~~~~~~~~~ 440 (442)
++++++|+++++++-++
T Consensus 383 ~~~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 383 DQALEIIKKVLKSFDSN 399 (400)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999877443
No 65
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=7.9e-26 Score=226.37 Aligned_cols=323 Identities=15% Similarity=0.179 Sum_probs=221.7
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|.++++++|.|+| +||++||||.++ ....++ +||+|.+|+.+++++...... .....+...++.++|++.++.
T Consensus 23 p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~p~ 98 (425)
T PRK07495 23 QIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH----QVVPYENYVRLAERLNALVPG 98 (425)
T ss_pred CeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc----CccCCHHHHHHHHHHHHhCCC
Confidence 6788999999999 599999999654 333344 589999999999998543211 123457778899999998863
Q ss_pred ---CcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC-------------eEEEecCCC------
Q 013461 170 ---PDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKHND------ 224 (442)
Q Consensus 170 ---e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~-------------~v~~~~~~d------ 224 (442)
+++++++||++|++.|++. +.+|..+|.+...+|+.+..++.+++. .+..++.++
T Consensus 99 ~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (425)
T PRK07495 99 DFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVS 178 (425)
T ss_pred CCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccccccc
Confidence 5789999999999999964 457778888999999988776665432 122333332
Q ss_pred ----HHHHHHHHHhh-c-ccccc----------------------------cccc---------cccccCCCc-cccccC
Q 013461 225 ----MDSLRNTLERV-T-ADNKR----------------------------SNSF---------GVLGRSGRG-LTEHCG 260 (442)
Q Consensus 225 ----~~~Le~~l~~~-~-~~~~~----------------------------a~~~---------g~~G~~g~g-~~~~~~ 260 (442)
.++++++++.. . ..... .|++ | +|++|.+ ..++++
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~a~~~~g 257 (425)
T PRK07495 179 VEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTG-FARTGKLFAMEHHE 257 (425)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhc-CCcCCCceeecccC
Confidence 34456666421 1 11000 1111 1 2445543 356778
Q ss_pred CCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 013461 261 VPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAI 338 (442)
Q Consensus 261 v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~ 338 (442)
+.|| +.||||++|. +.|++++++++++.+..... ..+.+.+|+.++++.++++++++. ++.+++++++++
T Consensus 258 v~pD-----i~tlsK~l~~G~pigav~~~~~i~~~~~~~~~--~~T~~~~pl~~aaa~a~l~~l~~~-~l~~~~~~~g~~ 329 (425)
T PRK07495 258 VAAD-----LTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGL--GGTYGGNPLGIAAAHAVLDVIEEE-DLCERANQLGNR 329 (425)
T ss_pred CCCC-----EEeehhhhcCCccceEEEEcHHHHhccCCCCc--CCCCCCCHHHHHHHHHHHHHHHhc-hHHHHHHHHHHH
Confidence 8775 5679999963 35889999999988764333 334456999999999999999764 588999999999
Q ss_pred HHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEec
Q 013461 339 LRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 415 (442)
Q Consensus 339 l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~ 415 (442)
|++.|+++. .++... ...+.++++.+.++.. ..++......+...+++ +|+++...... .+.||+.|+
T Consensus 330 l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~-~~~~~~~~~~~~~~~~~-~Gvl~~~~g~~-------~~~~r~~Pp 400 (425)
T PRK07495 330 LKQRLASLRETVPEIADIRGPGFMNAVEFNDADS-GLPSAEFANRVRLKALE-KGLILLTCGVH-------GNVIRFLAP 400 (425)
T ss_pred HHHHHHHHHhhCCCeeeeecCceEEEEEEecCCC-CCccHHHHHHHHHHHHH-CCeEEeecCCC-------CCEEEEeCC
Confidence 999887641 122111 1246778888754321 11222334567776554 69998653210 134999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 013461 416 AAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 416 ~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..+|++|+++++++|+++++++
T Consensus 401 l~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 401 ITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred CccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999765
No 66
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=8.3e-26 Score=225.01 Aligned_cols=320 Identities=19% Similarity=0.238 Sum_probs=222.3
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+.+++++..... + .+ ..+...++.++|++..+
T Consensus 22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~--~-~~--~~~~~~~la~~L~~~~~ 96 (408)
T PRK04612 22 RQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTS--N-VF--YSAPPLKLAEELVTASR 96 (408)
T ss_pred CCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccc--c-cc--CCHHHHHHHHHHHhhCC
Confidence 35778999999999 599999999654 444455 48999999999998743221 1 11 34667889999998775
Q ss_pred -CCcEEEEcchHHHHHhhhhhhc------c----CCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCH
Q 013461 169 -TPDSILYSYGLSTMFSAIPCFC------K----KGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDM 225 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a~~------~----~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~ 225 (442)
.+++++++||++|++.|++... + +..+|.+...+|+.+..++.+++. .+..++++|.
T Consensus 97 ~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~ 176 (408)
T PRK04612 97 FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDV 176 (408)
T ss_pred CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCH
Confidence 4688999999999999996432 2 234678889999988777765542 1345667889
Q ss_pred HHHHHHHHhhcccccc--------------------------cccc---------cccccCCCcc-ccccCCCCCceeEE
Q 013461 226 DSLRNTLERVTADNKR--------------------------SNSF---------GVLGRSGRGL-TEHCGVPVDKIDIV 269 (442)
Q Consensus 226 ~~Le~~l~~~~~~~~~--------------------------a~~~---------g~~G~~g~g~-~~~~~v~~~~~dii 269 (442)
+.+++.++..+..... .|+. | +|++|... ..++++.|+
T Consensus 177 ~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg-~gr~G~~~a~~~~~~~pd----- 250 (408)
T PRK04612 177 EALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCG-MGRTGTLFAHWQEQVTPD----- 250 (408)
T ss_pred HHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC-CCcCCchhhhhhcCCCCC-----
Confidence 9998887521110000 1111 1 34444322 234455554
Q ss_pred EEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC
Q 013461 270 TAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIH 347 (442)
Q Consensus 270 i~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~ 347 (442)
+.||||++|. +-|++++++++++.+.......+| +.+|+.++++.++|+.+++ +++.++++++++++++.|+++.
T Consensus 251 i~t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~--~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~l~~l~ 327 (408)
T PRK04612 251 IVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTF--GGNPLAAAVARVALRKLAS-PQIAANVARQSAALRAGLEALN 327 (408)
T ss_pred EEEEcchhcCCCceEEEEECHHHHhhhcCCCcCCCC--CCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 6789999973 237788888888887654444444 4589999999999999976 4689999999999999998751
Q ss_pred -Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHH
Q 013461 348 -GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLV 424 (442)
Q Consensus 348 -g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~ 424 (442)
.+.+.. ...+.++.+.+..+ ......++++. +.++||++.+.. ++.+|+.++..+|++||+
T Consensus 328 ~~~~~i~~vrg~Gl~~~i~~~~~------~~~~a~~i~~~-l~~~Gvlv~~~g---------~~~lRl~Ppl~it~eeid 391 (408)
T PRK04612 328 AEFGVFAQVRGRGLMLGAVLAPA------HAGQAGAILDL-AAEHGLLLLQAG---------PDVLRFVPALNLTDAELA 391 (408)
T ss_pred hhCCCeeeeeccceEEEEEecCc------hhhHHHHHHHH-HHHCCeEEeeCC---------CCEEEEcCCccCCHHHHH
Confidence 122211 23566777777421 11223466665 455699987532 134999999999999999
Q ss_pred HHHHHHHHHHHHHhhcc
Q 013461 425 KACESLKRISAVVLRDR 441 (442)
Q Consensus 425 ~~i~~l~~~~~~~~~~~ 441 (442)
++++++++++.++.++|
T Consensus 392 ~~l~~l~~~l~~~~~~~ 408 (408)
T PRK04612 392 DGLARLRLALADYVAQR 408 (408)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999998877654
No 67
>PRK07482 hypothetical protein; Provisional
Probab=99.95 E-value=2.5e-25 Score=224.81 Aligned_cols=327 Identities=16% Similarity=0.121 Sum_probs=220.2
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
|.++++++|.|+| .|||+||||.++ ...+++ +||+|.+|+.+++++...... ......+...+|.++|++..+
T Consensus 33 p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~---~~~~~~~~~~~lAe~L~~~~p~ 109 (461)
T PRK07482 33 GRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHT---YVGHGTEASITLSKRIIDRAPA 109 (461)
T ss_pred CeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCcccc---ccccCCHHHHHHHHHHHHhCCC
Confidence 6789999999999 599999999654 334444 489999999999998432211 111246788899999999885
Q ss_pred -CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEE--ecC--
Q 013461 169 -TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVY--FKH-- 222 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~--~~~-- 222 (442)
.+++++++||++|++.|++... +|..+|.+...+|+.+..++.+++.. +.. ++.
T Consensus 110 ~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~ 189 (461)
T PRK07482 110 GMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYY 189 (461)
T ss_pred CcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccc
Confidence 5788999999999999997542 34567888899999877666555411 111 111
Q ss_pred C--------------CHHHHHHHHHhhc-ccccc---------------------------------------ccccccc
Q 013461 223 N--------------DMDSLRNTLERVT-ADNKR---------------------------------------SNSFGVL 248 (442)
Q Consensus 223 ~--------------d~~~Le~~l~~~~-~~~~~---------------------------------------a~~~g~~ 248 (442)
+ +.++++++++... +.... ..+||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRt 269 (461)
T PRK07482 190 RRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRL 269 (461)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcC
Confidence 1 2456777775321 11110 4445554
Q ss_pred ccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhC-----CceeccCCCcHHHHHHHHHHHH
Q 013461 249 GRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSS-----SGYVFSASLPPYLASAAITAID 320 (442)
Q Consensus 249 G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~-----~~~~~s~s~~p~~aaaa~aal~ 320 (442)
|+ .+..+++|+.|| |+ +++|++|. +-|.+++++++++.+.... .....+.+.+|+.|++++++|+
T Consensus 270 G~--~~a~~~~gv~PD---iv--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 342 (461)
T PRK07482 270 GS--MFGSDHYGIEPD---LI--TVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD 342 (461)
T ss_pred cc--hhhHHhcCCCCC---EE--EEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHH
Confidence 43 235688999985 44 59999963 2355778888888775321 1122334569999999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHHhhccC-CCceee--cCCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEEe
Q 013461 321 VLEENPDLITKLKKNTAILRTGLSDI-HGLSIA--SNPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 321 ~l~~~~~~~~~l~~~~~~l~~~L~~~-~g~~~~--~~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
++++. ++.++.+++.++|++.|+++ ....+. ....+.++.+.+..+.... ..+.....+++..+++ +||++.
T Consensus 343 ~~~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~ 420 (461)
T PRK07482 343 ILERE-NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALE-RGVIAR 420 (461)
T ss_pred HHHhC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHH-CCcEEe
Confidence 99764 48899999999999999754 112111 1235667778775321110 1111234567776554 699985
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+... ...+|+.++..+|++||++++++++++++++.+
T Consensus 421 ~~~~--------~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 421 AMPH--------GDILGFAPPLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred cCCC--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4211 134999999999999999999999999987643
No 68
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.95 E-value=1.4e-25 Score=225.43 Aligned_cols=317 Identities=19% Similarity=0.288 Sum_probs=223.6
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC---CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh-
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA---NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL- 167 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~- 167 (442)
+.++++++|.++| .||++||||.++ .++|+ +||+|++++.+++++ +.. .+...+...+|.++|++.+
T Consensus 33 ~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~-~~~------~~~~~~~~~~la~~L~~~~~ 104 (426)
T PRK00062 33 PRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEK-GLS------FGAPTELEVELAELVIELVP 104 (426)
T ss_pred CeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHh-CCc------CCCCCHHHHHHHHHHHHhCC
Confidence 4678999999999 699999999775 45677 689999999999988 332 1234677789999999876
Q ss_pred CCCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcC-------------------CeEEEecCCCH
Q 013461 168 GTPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSR-------------------STVVYFKHNDM 225 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g-------------------~~v~~~~~~d~ 225 (442)
+.++++++++|++|++.+++. +.++.++|.++..+|+.+......++ ...+.++|+|+
T Consensus 105 ~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 184 (426)
T PRK00062 105 SIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDL 184 (426)
T ss_pred CCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCH
Confidence 467899999999999999976 44667788899999987643333211 12466788999
Q ss_pred HHHHHHHHhhcccccc----------------------------cccc---------c-ccccCCCccccccCCCCCcee
Q 013461 226 DSLRNTLERVTADNKR----------------------------SNSF---------G-VLGRSGRGLTEHCGVPVDKID 267 (442)
Q Consensus 226 ~~Le~~l~~~~~~~~~----------------------------a~~~---------g-~~G~~g~g~~~~~~v~~~~~d 267 (442)
+++++.++........ .|+. | .+| +.+..+++++.||
T Consensus 185 ~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g--~~~~~~~~~~~pD--- 259 (426)
T PRK00062 185 EAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVA--LGGAQGYYGVTPD--- 259 (426)
T ss_pred HHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccC--CccHHHHhCCCcc---
Confidence 9999988643221100 1111 1 122 2455677888764
Q ss_pred EEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceecc-CCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhc
Q 013461 268 IVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFS-ASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLS 344 (442)
Q Consensus 268 iii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s-~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~ 344 (442)
+.+|||++|. +.|++++++++++.++..+..+.++ .+.+|+.+++++++|+.+++. +++++++++.+++++.|+
T Consensus 260 --i~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~-~~~~~~~~~~~~~~~~l~ 336 (426)
T PRK00062 260 --LTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP-GFYEELEALTKRLAEGLK 336 (426)
T ss_pred --hHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHH
Confidence 4679999974 3578899999999886443334444 367899999999999998765 588999999999998887
Q ss_pred cC---CCceeecCCCCCEEEEEecCCCCC-----chhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecC
Q 013461 345 DI---HGLSIASNPESPIVFLILEKSTGS-----MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSA 416 (442)
Q Consensus 345 ~~---~g~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~ 416 (442)
++ .++.......+.++.+.+..+... ...+...+..+...++ ++||++.+..++ .++++ .
T Consensus 337 ~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~~~---------~~~~~--~ 404 (426)
T PRK00062 337 EAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQFE---------AGFVS--A 404 (426)
T ss_pred HHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCCcC---------ceeee--c
Confidence 43 133332234678888887542111 0112233456777655 569999875432 26654 6
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 013461 417 AHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 417 ~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+|++||++++++++++++++
T Consensus 405 ~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 405 AHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cCCHHHHHHHHHHHHHHHHhh
Confidence 789999999999999988653
No 69
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.95 E-value=8.3e-26 Score=227.61 Aligned_cols=318 Identities=13% Similarity=0.133 Sum_probs=221.8
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|.++++++|.++| .||++||||.++ ...+++ +||+|.+++.++++++..... ..-+.+...+|.++|++..+.
T Consensus 37 p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~lAe~L~~~~p~ 112 (453)
T PRK06943 37 LLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML----AGCTHEPAIELAERLAALTGG 112 (453)
T ss_pred CceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc----cccCCHHHHHHHHHHHHhCCC
Confidence 6789999999999 599999999654 334444 489999999999998654332 112457788999999998873
Q ss_pred --CcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecC----
Q 013461 170 --PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKH---- 222 (442)
Q Consensus 170 --e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~---- 222 (442)
+++++++||++|++.|++.. .+|..+|.+...+|+.+..++.+++.. +..++.
T Consensus 113 ~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 113 TLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcc
Confidence 58899999999999999764 235567889999999887777666421 111221
Q ss_pred -------------CCHHHHHHHHHhhcccccc----------------------------------------cccccccc
Q 013461 223 -------------NDMDSLRNTLERVTADNKR----------------------------------------SNSFGVLG 249 (442)
Q Consensus 223 -------------~d~~~Le~~l~~~~~~~~~----------------------------------------a~~~g~~G 249 (442)
++.++++++++........ ..++|
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~G--- 269 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCG--- 269 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCC---
Confidence 1246677777532211000 34444
Q ss_pred cCCC-ccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhC--Cc--eeccCCCcHHHHHHHHHHHHH
Q 013461 250 RSGR-GLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSS--SG--YVFSASLPPYLASAAITAIDV 321 (442)
Q Consensus 250 ~~g~-g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~--~~--~~~s~s~~p~~aaaa~aal~~ 321 (442)
++|. +..+++|+.|| | .+++|++|. +.|.+++++++++.+.... .. ...+.+.+|+.|++++++|++
T Consensus 270 RtG~~fa~~~~gv~PD---i--vt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~ 344 (453)
T PRK06943 270 RTGTFFACEQAGVWPD---F--LCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDL 344 (453)
T ss_pred CCcchhHHHhCCCCCC---e--EeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHH
Confidence 4443 44578999985 4 459999962 3466889999998775321 01 122334589999999999999
Q ss_pred HhcChHHHHHHHHHHHHHHHhhccC---CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccC
Q 013461 322 LEENPDLITKLKKNTAILRTGLSDI---HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR 398 (442)
Q Consensus 322 l~~~~~~~~~l~~~~~~l~~~L~~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~ 398 (442)
+++++ +.++.+++.++|++.|+++ +++.-. ...+.++.+.+..+.. .+.....++...+++ +||++.+..
T Consensus 345 i~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gvel~~~~~---~~~~~~~~i~~~~~~-~Gll~~~~g- 417 (453)
T PRK06943 345 FAEDD-VLARNARKSARLRAALAPLAAHPQVRHL-RQRGTIFAFDVALDGD---AARTFSRRFFEAALE-RELLLRPIG- 417 (453)
T ss_pred HHhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccccEEEEEEccCCC---cchHHHHHHHHHHHH-CCcEEEecC-
Confidence 98754 8899999999999999765 223211 2356677777753211 112234567776554 699987532
Q ss_pred cccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 399 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 399 ~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
..+|++++..+|++||++++++|+++++++.
T Consensus 418 ---------~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 418 ---------TTVYLMPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred ---------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 1299999999999999999999999998764
No 70
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.95 E-value=2.3e-25 Score=223.73 Aligned_cols=320 Identities=18% Similarity=0.281 Sum_probs=220.5
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| .||++||||.++ ....++ +||+|.+|+.+++++... . .-..+...++.++|++.++
T Consensus 35 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~------~~~~~~~~~la~~l~~~~p 107 (428)
T PRK12389 35 APVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL-Y------GTPTELEIEFAKMLKEAIP 107 (428)
T ss_pred CCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc-c------CCCCHHHHHHHHHHHHhCC
Confidence 46778999999999 599999999554 444455 589999999999987321 1 1245777899999998775
Q ss_pred -CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcC-------------------CeEEEecCCCH
Q 013461 169 -TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSR-------------------STVVYFKHNDM 225 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g-------------------~~v~~~~~~d~ 225 (442)
.+++.+++||++|++.|++. +.+|..+|.+...+|+.+...+..++ ..+..+++||+
T Consensus 108 ~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 187 (428)
T PRK12389 108 SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDI 187 (428)
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCH
Confidence 57889999999999999964 45777788899999998766665433 13456788999
Q ss_pred HHHHHHHHhhcccccc--------------------------ccccccc--------c-cCCC-ccccccCCCCCceeEE
Q 013461 226 DSLRNTLERVTADNKR--------------------------SNSFGVL--------G-RSGR-GLTEHCGVPVDKIDIV 269 (442)
Q Consensus 226 ~~Le~~l~~~~~~~~~--------------------------a~~~g~~--------G-~~g~-g~~~~~~v~~~~~dii 269 (442)
+++++.+++....... ++..|++ | +++. +..+++|+.|| |
T Consensus 188 ~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PD---i- 263 (428)
T PRK12389 188 EALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPD---L- 263 (428)
T ss_pred HHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCC---e-
Confidence 9999988754322110 1111110 1 2332 44678899875 4
Q ss_pred EEeccccccC--CCcEEEcCHHhHHHHHhhCCceec-cCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC
Q 013461 270 TAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVF-SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI 346 (442)
Q Consensus 270 i~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~-s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~ 346 (442)
.||+|++|. +.|.+++++++++.+...+..+.+ +.+.+|+.|++++++|+++++. ++.++++++.++|++.|+++
T Consensus 264 -vt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~-~l~~~~~~~g~~l~~~L~~l 341 (428)
T PRK12389 264 -TALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE-GVYEKLDRLGAMLEEGILEA 341 (428)
T ss_pred -eeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHH
Confidence 569999973 236678999999987542222233 3367999999999999999865 48999999999999999764
Q ss_pred ---CCceeecCCCCCEEEEEecCCCCC-----chhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCC
Q 013461 347 ---HGLSIASNPESPIVFLILEKSTGS-----MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH 418 (442)
Q Consensus 347 ---~g~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~ 418 (442)
.++.........++.+.+..+... ...+......+.+.++ ++||++.+..++ .+ .++..+
T Consensus 342 ~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~---------~~--~~~l~~ 409 (428)
T PRK12389 342 AEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINLAPSKYE---------AW--FLTTAH 409 (428)
T ss_pred HHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEeecCCCC---------Ce--eecCCC
Confidence 132111112334677766432110 0012233456777655 469999875321 13 467789
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 013461 419 SEADLVKACESLKRISAV 436 (442)
Q Consensus 419 t~eei~~~i~~l~~~~~~ 436 (442)
|++||+++++++++++++
T Consensus 410 t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 410 TEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 71
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.95 E-value=1.5e-25 Score=226.28 Aligned_cols=322 Identities=11% Similarity=0.069 Sum_probs=221.1
Q ss_pred CeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--
Q 013461 94 PVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-- 168 (442)
Q Consensus 94 ~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-- 168 (442)
.++++++|.|+| .||++||||.++ ....++ +||+|.+|+++++++....+.. .-..+...+|.++|++..+
T Consensus 31 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~----~~~~~~~~~lae~L~~~~p~~ 106 (466)
T PRK07030 31 IPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA----GFSHEPVIELSERLVKITPPG 106 (466)
T ss_pred ceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHHhCCCC
Confidence 478999999999 599999999654 334444 4899999999999986433321 1246778899999999875
Q ss_pred CCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCC----
Q 013461 169 TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN---- 223 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~---- 223 (442)
.+++.+++||++|++.|++.. .++..+|.+...+|+.+..++.+++.. +..++..
T Consensus 107 ~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 186 (466)
T PRK07030 107 LSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYL 186 (466)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccc
Confidence 468899999999999999754 235568889999999988777765532 1112211
Q ss_pred -------------CHHHHHHHHHhhcccc------c-c---------------------------------ccccccccc
Q 013461 224 -------------DMDSLRNTLERVTADN------K-R---------------------------------SNSFGVLGR 250 (442)
Q Consensus 224 -------------d~~~Le~~l~~~~~~~------~-~---------------------------------a~~~g~~G~ 250 (442)
+.++++++++...... + . ..++|++|+
T Consensus 187 ~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~ 266 (466)
T PRK07030 187 RPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT 266 (466)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc
Confidence 2355677775322110 0 0 344444442
Q ss_pred CCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhC---Cc--eeccCCCcHHHHHHHHHHHHHH
Q 013461 251 SGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSS---SG--YVFSASLPPYLASAAITAIDVL 322 (442)
Q Consensus 251 ~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~---~~--~~~s~s~~p~~aaaa~aal~~l 322 (442)
.+..+++|+.|| | .+|+|++|. +.|.+++++++++.+.... .. ...+.+.+|+.|++++++|+++
T Consensus 267 --~~a~~~~gv~PD---i--v~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i 339 (466)
T PRK07030 267 --MFACEQAGIRPD---F--LCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIF 339 (466)
T ss_pred --chHHHhcCCCCC---E--EeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 344688999985 4 459999962 3466889999998774210 01 1223345899999999999999
Q ss_pred hcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEEeecc
Q 013461 323 EENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFVVTSK 397 (442)
Q Consensus 323 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v~~~~ 397 (442)
++++ +.++.++++++|++.|+++...+... ...+.++.+.+..+.... ..+.....++.+.+++ +|+++.+..
T Consensus 340 ~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g 417 (466)
T PRK07030 340 EQDN-VIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALE-RGALLRPLG 417 (466)
T ss_pred HhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHH-CCeEEEecC
Confidence 8754 88999999999999997752222111 234667777774322110 0111223567776554 599987632
Q ss_pred CcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 398 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 398 ~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
..+|+.++..+|++||++++++++++++++.
T Consensus 418 ----------~~i~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 418 ----------SVVYFLPPYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred ----------CEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 2399999999999999999999999998873
No 72
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.95 E-value=3.7e-25 Score=223.36 Aligned_cols=322 Identities=13% Similarity=0.102 Sum_probs=217.7
Q ss_pred CeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--
Q 013461 94 PVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-- 168 (442)
Q Consensus 94 ~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-- 168 (442)
..+++++|.|+| .||++||||.++ ...+++ +||+|.+|+.++++++...++. .-..+...+|.++|++.++
T Consensus 48 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~----~~~~~~~~~lae~L~~~~p~~ 123 (472)
T PRK08742 48 VPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA----GFTHEPAVQLAEQLLAIAPRQ 123 (472)
T ss_pred eeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc----ccCCHHHHHHHHHHHHhCCCc
Confidence 468999999999 599999999654 333344 4899999999999886543321 1135777899999999875
Q ss_pred -----CCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecC
Q 013461 169 -----TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKH 222 (442)
Q Consensus 169 -----~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~ 222 (442)
.+++.+.+||++|++.|++.. .+|..+|.+...+|+.+..++.+++.. +..++.
T Consensus 124 ~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~ 203 (472)
T PRK08742 124 DGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPS 203 (472)
T ss_pred ccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCC
Confidence 258899999999999999754 235568889999999988777765432 122222
Q ss_pred C-----------------CHHHHHHHHHhhccccc-------c---------------------------------cccc
Q 013461 223 N-----------------DMDSLRNTLERVTADNK-------R---------------------------------SNSF 245 (442)
Q Consensus 223 ~-----------------d~~~Le~~l~~~~~~~~-------~---------------------------------a~~~ 245 (442)
+ +.+.+++.++....... . ..++
T Consensus 204 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGf 283 (472)
T PRK08742 204 PDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGF 283 (472)
T ss_pred CCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 1 13455666643211100 0 4445
Q ss_pred cccccCCCccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhC--Cc--eeccCCCcHHHHHHHHHH
Q 013461 246 GVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSS--SG--YVFSASLPPYLASAAITA 318 (442)
Q Consensus 246 g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~--~~--~~~s~s~~p~~aaaa~aa 318 (442)
|++|+ .+..+++|+.|| | .+++|++|. +-|.+++++++++.+.... .. ...+.+.+|+.|++++++
T Consensus 284 GRtG~--~~a~e~~gv~PD---i--v~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~ 356 (472)
T PRK08742 284 GRTGT--LFACEQAGVMPD---L--LCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALAT 356 (472)
T ss_pred CCCcc--chHHHhcCCCCC---E--EEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHH
Confidence 54443 344678999885 4 459999962 3466888999988764211 11 122334589999999999
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEE
Q 013461 319 IDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 319 l~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v 393 (442)
|++++++ ++.++.++++++|++.++.+....+.. ...+.++.+.+..+.... ..+.....++.+.+++ +||++
T Consensus 357 L~~i~~~-~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~ 434 (472)
T PRK08742 357 LDIFADD-DVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALA-RGVVL 434 (472)
T ss_pred HHHHHHC-CHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHH-CCeEE
Confidence 9999875 488889999999887765542222211 235667777775322111 1111223567776665 59998
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
.+.. +.|||.++..+|++||++++++|++++.++.
T Consensus 435 ~~~g----------~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 435 RPLG----------DVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 7632 2399999999999999999999999998754
No 73
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.95 E-value=6.2e-25 Score=222.20 Aligned_cols=327 Identities=14% Similarity=0.204 Sum_probs=218.1
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
+.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+.++++++..... .....+...++.++|+++++.
T Consensus 37 ~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~la~~L~~~~p~ 112 (451)
T PRK06918 37 PTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF----NVMMYEPYIELAEKLAALAPG 112 (451)
T ss_pred CceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc----cccccHHHHHHHHHHHHhCCC
Confidence 5788999999999 599999999554 334455 489999999999998532211 112357788999999999862
Q ss_pred ---CcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecCCC------
Q 013461 170 ---PDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHND------ 224 (442)
Q Consensus 170 ---e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~~d------ 224 (442)
+++++++||++|++.|++. +.+|..+|.+...+|+.+..++.+++.. +..++..+
T Consensus 113 ~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (451)
T PRK06918 113 SFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPE 192 (451)
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccc
Confidence 5889999999999999964 4688889999999999988777655421 12222111
Q ss_pred -----------HHHHHHHHHhh-c-ccccc---------------------------------------cccccccccCC
Q 013461 225 -----------MDSLRNTLERV-T-ADNKR---------------------------------------SNSFGVLGRSG 252 (442)
Q Consensus 225 -----------~~~Le~~l~~~-~-~~~~~---------------------------------------a~~~g~~G~~g 252 (442)
.+.+++.+... . ..... ..++|. +|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr---~g 269 (451)
T PRK06918 193 GLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR---TG 269 (451)
T ss_pred cCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCc---cC
Confidence 11244443211 1 11000 223333 33
Q ss_pred C-ccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHH
Q 013461 253 R-GLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLI 329 (442)
Q Consensus 253 ~-g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~ 329 (442)
. ...+++++.|| +.||||+++. +-|++++++++++.+...... .+.+.+|+.++++.++++.+++. .+.
T Consensus 270 ~~~a~~~~~v~pD-----i~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~--~T~~g~~l~~aaa~a~l~~i~~~-~~~ 341 (451)
T PRK06918 270 KYFAIEHFDVVPD-----LITVSKSLGAGVPISGVIGRKEIMDESAPGELG--GTYAGSPLGCAAALAVLDIIEKE-NLN 341 (451)
T ss_pred ceehhHhcCCCCC-----EEeeehhhcCCCccEEEEEcHHHHhccCCCCcC--cCCCcCHHHHHHHHHHHHHHHHC-CHH
Confidence 2 23456777664 5579999972 238899999999887543332 23345899999999999988654 477
Q ss_pred HHHHHHHHHHHHhhccCC-Cceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCC
Q 013461 330 TKLKKNTAILRTGLSDIH-GLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL 406 (442)
Q Consensus 330 ~~l~~~~~~l~~~L~~~~-g~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~ 406 (442)
+++++.++++.+.|+++. ..++. ....+.++.+.+..+.....++.....++.+.++ ++||++.++..+
T Consensus 342 ~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~Gvlv~~~~~~------- 413 (451)
T PRK06918 342 DRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEAN-KRGLLLLSAGTY------- 413 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHH-HCCeEEeecCCC-------
Confidence 888888888888887651 22211 1134556665553211111122334556776544 569999875322
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhccC
Q 013461 407 PVGIRLFVSAAHSEADLVKACESLKRISAVVLRDRN 442 (442)
Q Consensus 407 ~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~~~ 442 (442)
.+.+|++++..+|++||++++++|+++++++.++.|
T Consensus 414 ~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~~~ 449 (451)
T PRK06918 414 GNVIRVLMPLVITDEQLEEGLTIIEESLQACYEKAN 449 (451)
T ss_pred CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 145999999989999999999999999998876644
No 74
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.5e-26 Score=210.33 Aligned_cols=332 Identities=22% Similarity=0.296 Sum_probs=238.4
Q ss_pred CCCHHHHHHHHhhhcCCCCCcccccccccCCCeeecCCCCeEE-ECCeeEEEe-ecCCCCCCC-CChHHHHHHHHHHHhc
Q 013461 63 PLTKKEIDELCDEWVPESLIPPIIEEMRCEPPVLESAAGPHTI-ISGKEVVNF-ASANYLGLI-GHEKLLESCTSALEKY 139 (442)
Q Consensus 63 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~G~~~id~-~s~~~l~~~-~~p~v~ea~~~~l~~~ 139 (442)
.++.+++.++-.++.-..+.| -|.++++++|+++| .+|++|+|| +++...+-+ +||.|.++++++.++.
T Consensus 20 ~~aS~~~~~~E~k~~ahnyhp--------Lpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kL 91 (427)
T KOG1402|consen 20 TTASQQIMERENKYGAHNYHP--------LPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKL 91 (427)
T ss_pred ccchhhhhchhhhcccccCCc--------CceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHh
Confidence 566666544444443322222 25668999999999 599999999 555666666 5899999999999985
Q ss_pred CCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhc------c--CC---CEEEeCCCchHHHHH
Q 013461 140 GVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC------K--KG---DLIVADEGVHWGIQN 208 (442)
Q Consensus 140 g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~------~--~g---d~Vi~~~~~h~s~~~ 208 (442)
-.. +|.|| .++..+.++.+++++|.+.++-.++|.+|++.|+.... | |. .++.+.+..|+-+..
T Consensus 92 tls---srafY--nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ 166 (427)
T KOG1402|consen 92 TLS---SRAFY--NDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLG 166 (427)
T ss_pred hhh---hHHHh--hhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceee
Confidence 433 35666 57888999999999999999999999999999996542 2 22 345667777887777
Q ss_pred HHHhcCCe-------------EEEecCCCHHHHHHHHHhhcccccc----------------------------------
Q 013461 209 GLYLSRST-------------VVYFKHNDMDSLRNTLERVTADNKR---------------------------------- 241 (442)
Q Consensus 209 ~~~l~g~~-------------v~~~~~~d~~~Le~~l~~~~~~~~~---------------------------------- 241 (442)
++.++.-. +..++++|.++|+..|+.-.-....
T Consensus 167 ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~ 246 (427)
T KOG1402|consen 167 AISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIA 246 (427)
T ss_pred eEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEe
Confidence 77666422 5677889999999999862211000
Q ss_pred ---cccccccccCCCcc-ccccCCCCCceeEEEEeccccccCCCcE-----EEcCHHhHHHHHhhCCceeccCCCcHHHH
Q 013461 242 ---SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALATEGGF-----CTGSARVVDHQRLSSSGYVFSASLPPYLA 312 (442)
Q Consensus 242 ---a~~~g~~G~~g~g~-~~~~~v~~~~~diii~S~sK~lg~~GG~-----v~g~~~~i~~l~~~~~~~~~s~s~~p~~a 312 (442)
+.+. |++|..+ ++|-++.| ||++ |+|+++ ||+ +.++++++-.+....++.+|.. +|+.+
T Consensus 247 DEvQTGl---~RTGk~la~d~env~P---Divi--lgKalS--GG~~Pvsavl~~~~im~~~~pgeHgsTygg--NpLg~ 314 (427)
T KOG1402|consen 247 DEVQTGL---ARTGKLLACDYENVRP---DIVI--LGKALS--GGVYPVSAVLADDDIMLNIKPGEHGSTYGG--NPLGC 314 (427)
T ss_pred hhhhhcc---cccCcEEEeehhhcCC---CeEE--Eecccc--CCeeeeEEEEecHHHHhccCCCccccccCC--ChHHH
Confidence 3333 5566655 47778877 5776 999997 554 6788999988877766665555 99999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCC-c----eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 313 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHG-L----SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 313 aaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g-~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
++++++|+++.++ ++.++...+++.|+.+|++++. + +.+ ...+-+..+.+..... ....+.+++- .|+
T Consensus 315 ~vaiAalevi~ee-kL~era~~lG~~l~~~L~~l~~~~p~~v~~V-RGrGl~~ai~i~~~~~----~~~~aw~~cl-~lk 387 (427)
T KOG1402|consen 315 AVAIAALEVIVEE-KLVERAAKLGEILRDQLNKLQKKFPHVVKEV-RGRGLLNAIVINPSKT----SGQDAWDVCL-ALK 387 (427)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccccchhhee-eccceEEEEEeccccc----cchhHHHHHH-ccc
Confidence 9999999999875 4999999999999999988732 2 111 1245555555532211 1123445665 367
Q ss_pred hCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 388 ~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
++|++..+.+. .-||++++..++++|+++.++++.+.+.
T Consensus 388 ~~g~LAkptH~---------~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 388 ENGLLAKPTHG---------NIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ccccccCCCCC---------CeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 78998776543 2399999999999999999999988753
No 75
>PRK06917 hypothetical protein; Provisional
Probab=99.95 E-value=1.2e-25 Score=226.27 Aligned_cols=331 Identities=15% Similarity=0.153 Sum_probs=224.0
Q ss_pred CeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-
Q 013461 94 PVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT- 169 (442)
Q Consensus 94 ~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~- 169 (442)
|++++++|.|+| +||++||||.++ ....++ +||+|.+|+++++++...... + .-..+...+|.++|++.++.
T Consensus 15 p~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~---~~~~~~~~~lae~L~~~~p~~ 90 (447)
T PRK06917 15 PVISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-S---QFTSEPAEKLAKKLSDLSPGD 90 (447)
T ss_pred CeEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-c---ccCCHHHHHHHHHHHHhCCCC
Confidence 479999999999 599999999654 334444 489999999999998533211 1 11357788999999998863
Q ss_pred -CcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEE--ec----
Q 013461 170 -PDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVY--FK---- 221 (442)
Q Consensus 170 -e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~--~~---- 221 (442)
+.+++++||++|++.|++.. .+|..+|.+...+|+.+..++.+++.. +.. .|
T Consensus 91 ~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 170 (447)
T PRK06917 91 LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYR 170 (447)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccc
Confidence 57888899999999999855 345567888899999887777655421 011 11
Q ss_pred --C---------CCHHHHHHHHHhhccc-ccc----------------------------------------cccccccc
Q 013461 222 --H---------NDMDSLRNTLERVTAD-NKR----------------------------------------SNSFGVLG 249 (442)
Q Consensus 222 --~---------~d~~~Le~~l~~~~~~-~~~----------------------------------------a~~~g~~G 249 (442)
. ++.++++++++....+ ... ..+| |
T Consensus 171 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGf---G 247 (447)
T PRK06917 171 CPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGL---G 247 (447)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCc---C
Confidence 1 1235667777643211 000 2233 4
Q ss_pred cCCCcc-ccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCCcee--ccCCCcHHHHHHHHHHHHHHh
Q 013461 250 RSGRGL-TEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSGYV--FSASLPPYLASAAITAIDVLE 323 (442)
Q Consensus 250 ~~g~g~-~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~~~--~s~s~~p~~aaaa~aal~~l~ 323 (442)
++|.+. .+++++.|| | .+|+|++|. +.|.+++++++++.+......+. .+.+.+|+.+++++++|++++
T Consensus 248 RtG~~~a~~~~gv~PD---i--~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~ 322 (447)
T PRK06917 248 RTGAMFAMEHWGVEPD---I--MTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYME 322 (447)
T ss_pred cccchhhHHhcCCCCC---E--EEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHH
Confidence 555544 578999885 4 569999963 45778899999998764322221 233568999999999999997
Q ss_pred cChHHHHHHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEEeecc
Q 013461 324 ENPDLITKLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFVVTSK 397 (442)
Q Consensus 324 ~~~~~~~~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v~~~~ 397 (442)
+. ++.++++++.++|++.|+++. ..++.. ...+.++.+.+..+.... ..+......+...+++ +||++.+..
T Consensus 323 ~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~ 400 (447)
T PRK06917 323 KH-NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGLLLYPAV 400 (447)
T ss_pred HC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCcEEEecc
Confidence 64 488999999999999997752 122111 234667777774321111 1122345567776555 599997643
Q ss_pred CcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 398 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 398 ~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
...... ....+|++++..+|++||++++++++++++++.++
T Consensus 401 ~~~~g~--~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 401 AGQDGK--EGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred cccCCC--CCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 210000 01359999999999999999999999999888665
No 76
>PRK06149 hypothetical protein; Provisional
Probab=99.95 E-value=9.6e-26 Score=246.34 Aligned_cols=323 Identities=17% Similarity=0.185 Sum_probs=228.2
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecCCCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh--
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASANYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL-- 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~-- 167 (442)
.|+.+++++|.|+| .||++||||.++ +.+++ +||+|.+|+++++.+.... ++ + ..+.+.+++++|++++
T Consensus 567 ~p~~i~~g~G~~l~D~dG~~ylD~~~~-~~~lGh~hp~v~~Ai~~q~~~l~~~---~~-~--~~~~~~elae~L~~~~p~ 639 (972)
T PRK06149 567 DPPQIERGWRHHLFDMAGRSYLDMVNN-VTVLGHGHPRLAAAAARQWSLLNTN---SR-F--HYAAVAEFSERLAALAPD 639 (972)
T ss_pred CCCeEEEeeeeEEEeCCCCEEEECCCC-ccccCCCCHHHHHHHHHHHHhcccc---cc-c--cCHHHHHHHHHHHHhCCC
Confidence 46789999999999 599999999754 45666 6899999999999875322 12 1 3578899999999998
Q ss_pred CCCcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEE----------ec
Q 013461 168 GTPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVY----------FK 221 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~----------~~ 221 (442)
+.+.+++++||++|++.|++ ++.++.++|.++..+|+.+..+..+++.. +.. ++
T Consensus 640 ~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~ 719 (972)
T PRK06149 640 GLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFR 719 (972)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCC
Confidence 46789999999999999997 66788999999999998776655443210 111 22
Q ss_pred CCC-----HHHHHHHHHhhc---ccccc---------------------------------------cccccccccCCCc
Q 013461 222 HND-----MDSLRNTLERVT---ADNKR---------------------------------------SNSFGVLGRSGRG 254 (442)
Q Consensus 222 ~~d-----~~~Le~~l~~~~---~~~~~---------------------------------------a~~~g~~G~~g~g 254 (442)
+++ .+++++.++... ..... ..|||++|+.++
T Consensus 720 ~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~- 798 (972)
T PRK06149 720 GADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFW- 798 (972)
T ss_pred CcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccch-
Confidence 233 345555554321 11000 346666664333
Q ss_pred cccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHH
Q 013461 255 LTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKL 332 (442)
Q Consensus 255 ~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l 332 (442)
..+++|+.| ||+ ||+|++|. +.|++++++++++.+...+ .+..+++.+|+.|++++++|++++++ ++.+++
T Consensus 799 a~e~~gv~P---Div--t~gK~lg~G~Pl~av~~~~~i~~~~~~~~-~~~sT~~gnP~~~aaala~L~~i~~e-~l~~~~ 871 (972)
T PRK06149 799 GFEQQGVVP---DII--TMAKGMGNGHPLGAVITRREIAEALEAEG-YFFSSTGGSPVSCRIGMAVLDVLREE-KLQENA 871 (972)
T ss_pred hhhhcCCCC---CEE--EecccccCCeeeEEEEEcHHHHhhhccCC-cccCCCCCCHHHHHHHHHHHHHHHhc-CHHHHH
Confidence 457899987 454 69999973 3478999999999886422 22223567999999999999999765 489999
Q ss_pred HHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCc
Q 013461 333 KKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVG 409 (442)
Q Consensus 333 ~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~ 409 (442)
++++++|++.|+++. ..++.+ ...+.++.+.+..+..+.+++......+++.+++ +||++.+.... +..
T Consensus 872 ~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~~~g~~-------~~v 943 (972)
T PRK06149 872 RRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQPTGDH-------LNI 943 (972)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEeecCCC-------CCE
Confidence 999999999997651 122211 2356677777743221111233345677776555 59999764321 134
Q ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 410 IRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 410 iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
|||.++..+|++|++++++++++++.+.
T Consensus 944 l~~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 944 LKIKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998653
No 77
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.95 E-value=1.7e-25 Score=225.14 Aligned_cols=318 Identities=17% Similarity=0.179 Sum_probs=216.7
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
|.++++++|.|+| .||++||||.++ ...+++ +||+|.+++.+++++....+. +.-..+...+|.++|++.++
T Consensus 32 p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~L~~~~p~ 107 (445)
T PRK09221 32 PRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA----FQMGHPLAFELAERLAELAPG 107 (445)
T ss_pred CceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhCCC
Confidence 5788999999999 599999999554 333444 589999999999998543321 11245777889999999875
Q ss_pred -CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCCC--
Q 013461 169 -TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHND-- 224 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d-- 224 (442)
.+++.+++||++|++.|++... +|..+|.+...+|+.+..++.+++.. +..++..+
T Consensus 108 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (445)
T PRK09221 108 GLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDL 187 (445)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccc
Confidence 4789999999999999997432 24457888999999887766655421 11222111
Q ss_pred ----------------HHHHHHHHHhhc-ccccc---------------------------------------ccccccc
Q 013461 225 ----------------MDSLRNTLERVT-ADNKR---------------------------------------SNSFGVL 248 (442)
Q Consensus 225 ----------------~~~Le~~l~~~~-~~~~~---------------------------------------a~~~g~~ 248 (442)
.++++++++... +.... ..++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~--- 264 (445)
T PRK09221 188 PENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGF--- 264 (445)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC---
Confidence 257777776432 11100 2244
Q ss_pred ccCCCc-cccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCC-----ceeccCCCcHHHHHHHHHHH
Q 013461 249 GRSGRG-LTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS-----GYVFSASLPPYLASAAITAI 319 (442)
Q Consensus 249 G~~g~g-~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~-----~~~~s~s~~p~~aaaa~aal 319 (442)
|++|.+ ..+++++.|| +.+++|+++. +.|.+++++++++.+..... ...++.+.+|+.+++++++|
T Consensus 265 GRtG~~~~~~~~gv~PD-----i~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L 339 (445)
T PRK09221 265 GRLGAAFAAERFGVTPD-----IITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATL 339 (445)
T ss_pred CcCchhhHHHhcCCCCC-----EEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHH
Confidence 444555 3678999874 4569999963 34778889999987753110 11233446999999999999
Q ss_pred HHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeecc
Q 013461 320 DVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK 397 (442)
Q Consensus 320 ~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~ 397 (442)
+++++. ++.++++++.++|++.|+++.+..... ...+.+..+.+...... +.....++.+.++ ++||++.+..
T Consensus 340 ~~i~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~---~~~~~~~~~~~~~-~~Gv~~~~~~ 414 (445)
T PRK09221 340 DIYREE-DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGA---PGARGYEAFMKCF-EKGLLVRYTG 414 (445)
T ss_pred HHHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEeccccc---ccchHHHHHHHHH-HCCeEEeecC
Confidence 999765 488999999999999998763332111 12334455555432110 1112346777655 4699986531
Q ss_pred CcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 398 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 398 ~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..+|++++..+|++||++++++|++++.++
T Consensus 415 ----------~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 415 ----------DTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ----------CEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 349999999999999999999999998764
No 78
>PRK07036 hypothetical protein; Provisional
Probab=99.95 E-value=3.9e-25 Score=223.52 Aligned_cols=325 Identities=17% Similarity=0.166 Sum_probs=217.7
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ....++ +||+|.+|+.+++++....+.. ...+.+...++.++|++..+
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~---~~~~~~~~~~lae~L~~~~p 109 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF---GDMTNAPAAELAAKLAELAP 109 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc---cccCCHHHHHHHHHHHHhCC
Confidence 36789999999999 599999999654 333344 4899999999999985433221 01246778899999999875
Q ss_pred --CCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCCC-
Q 013461 169 --TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHND- 224 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d- 224 (442)
.+++.+++||++|++.|++.. .+|..+|.+...+|+.+..++.+++.. +..++..+
T Consensus 110 ~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~ 189 (466)
T PRK07036 110 GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNP 189 (466)
T ss_pred CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcc
Confidence 468888999999999999753 124567888999999887766655421 11111111
Q ss_pred ----------------HHHHHHHHHhhccc-ccc---------------------------------------ccccccc
Q 013461 225 ----------------MDSLRNTLERVTAD-NKR---------------------------------------SNSFGVL 248 (442)
Q Consensus 225 ----------------~~~Le~~l~~~~~~-~~~---------------------------------------a~~~g~~ 248 (442)
.+++++.+...... ... ..+||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt 269 (466)
T PRK07036 190 YRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL 269 (466)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcC
Confidence 13345555432111 100 3344444
Q ss_pred ccCCCcccc-ccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhh---CCcee--ccCCCcHHHHHHHHHHH
Q 013461 249 GRSGRGLTE-HCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLS---SSGYV--FSASLPPYLASAAITAI 319 (442)
Q Consensus 249 G~~g~g~~~-~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~---~~~~~--~s~s~~p~~aaaa~aal 319 (442)
|+ .+..+ ++|+.|| | .+|+|++|. +-|.+++++++++.+... ...+. .+.+.+|+.|++++++|
T Consensus 270 G~--~~~~~~~~gv~PD---i--vt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 342 (466)
T PRK07036 270 GH--FFASEAVFGIQPD---I--ITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNI 342 (466)
T ss_pred ch--hhhhhhhcCCCCC---E--EEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHH
Confidence 32 23344 7899885 4 469999963 246688999999987532 11111 23345899999999999
Q ss_pred HHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCEEEe
Q 013461 320 DVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 320 ~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
+++++. ++.+++++++++|++.|+++...++.. ...+.++.+.+..+.... ..+......+...++ ++||++.
T Consensus 343 e~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~ 420 (466)
T PRK07036 343 EIMERE-GLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQ-ERGLLVR 420 (466)
T ss_pred HHHHhC-CHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHH-HCCcEEe
Confidence 999764 489999999999999997652222111 234667777775332111 112233456777655 4699987
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+.. ..+|++++..+|++||+++++++++++.++.
T Consensus 421 ~~~----------~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 421 PLE----------HLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred ecC----------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 532 1289999999999999999999999988764
No 79
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.95 E-value=1.7e-25 Score=224.61 Aligned_cols=321 Identities=16% Similarity=0.162 Sum_probs=216.7
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| .||++||||.++ ....++ +||+|.+++++++++.+..+.. ....+...+|.++|++.+.
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~~~~~~~lae~l~~~~~ 96 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL----DMHTTAKREFLETFEETIL 96 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc----ccCcHHHHHHHHHHHHhhc
Confidence 36789999999999 599999999654 334444 5899999999999985543321 1235777889999998642
Q ss_pred ----CC-cEEEE-cchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecC-----
Q 013461 169 ----TP-DSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKH----- 222 (442)
Q Consensus 169 ----~e-~~i~~-~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~----- 222 (442)
.+ ++.++ +||++|++.|++. +.+|..+|.+...+|+.+..++.+++. .+..+|.
T Consensus 97 ~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 176 (425)
T PRK09264 97 KPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFG 176 (425)
T ss_pred CCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccc
Confidence 33 45565 7999999999964 457777889999999988777766431 2333443
Q ss_pred ---CCHHHHHHHHHhhcc---cccc----------------------------cccccc--------cccCCCc-ccccc
Q 013461 223 ---NDMDSLRNTLERVTA---DNKR----------------------------SNSFGV--------LGRSGRG-LTEHC 259 (442)
Q Consensus 223 ---~d~~~Le~~l~~~~~---~~~~----------------------------a~~~g~--------~G~~g~g-~~~~~ 259 (442)
+|++++++++++... .... .|+.-+ +|++|.+ ..+++
T Consensus 177 ~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~ 256 (425)
T PRK09264 177 GDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERA 256 (425)
T ss_pred cchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhc
Confidence 467788888865321 1100 111100 3555554 35778
Q ss_pred CCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 013461 260 GVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNT 336 (442)
Q Consensus 260 ~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~ 336 (442)
++.|| +.||+|++|..| |++++++++ +.+....... +.+.+|+.++++.++++.+.+.+++.+++++++
T Consensus 257 ~v~PD-----i~t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~--T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g 328 (425)
T PRK09264 257 GITPD-----IVTLSKSISGYGLPMALVLIKPEL-DVWKPGEHNG--TFRGNNLAFVTATAALEEYWSDDAFEKEVKAKG 328 (425)
T ss_pred CCCCC-----EEEeccccCCCccceEEEEEchhh-hccCCCccCC--CCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 88874 457899998644 788888886 3332211222 334578888888899943333346889999999
Q ss_pred HHHHHhhccCC-Cce--ee-cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEE
Q 013461 337 AILRTGLSDIH-GLS--IA-SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL 412 (442)
Q Consensus 337 ~~l~~~L~~~~-g~~--~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi 412 (442)
++|++.|+++. ..+ +. ....+.++++.+.. .....++...++ ++||++.+.... ...||+
T Consensus 329 ~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~--------~~~~~~l~~~~~-~~Gv~~~~~~~~-------~~~lr~ 392 (425)
T PRK09264 329 ELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD--------GELAGKIAAEAF-ENGLIIETSGPE-------DEVVKL 392 (425)
T ss_pred HHHHHHHHHHHHhCCCceecceecccEEEEEecC--------hHHHHHHHHHHH-HCCCEEeccCCC-------CCEEEE
Confidence 99999886541 111 11 12356777888742 123456777655 569998764321 245999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 413 FVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 413 ~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
+++..+|++||++++++|+++++++.++
T Consensus 393 ~p~l~~t~~ei~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 393 LPPLTIDEEELEEGLDILEEAVAEVLAE 420 (425)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999876543
No 80
>PRK07480 putative aminotransferase; Validated
Probab=99.95 E-value=3.1e-25 Score=223.66 Aligned_cols=324 Identities=14% Similarity=0.164 Sum_probs=216.6
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
+.++++++|.|+| .||++||||.++ ...+++ +||+|.+|++++++++...+. .+....+...+|.++|++.++
T Consensus 33 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~p~ 109 (456)
T PRK07480 33 SRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT---FFKTTHPPAIELAAKLAEVAPP 109 (456)
T ss_pred CceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc---ccccCCHHHHHHHHHHHHhCCC
Confidence 5789999999999 599999999654 333444 489999999999998643221 112357888999999999985
Q ss_pred -CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCC---
Q 013461 169 -TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHN--- 223 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~--- 223 (442)
.+++++++||++|++.|++... +|..+|.+...+|+.+..++.+++.. +..++..
T Consensus 110 ~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~ 189 (456)
T PRK07480 110 GFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWF 189 (456)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccc
Confidence 4689999999999999997432 24457778899999887776665422 1111111
Q ss_pred ------C--------HHHHHHHHHhhc-ccccc---------------------------------------cccccccc
Q 013461 224 ------D--------MDSLRNTLERVT-ADNKR---------------------------------------SNSFGVLG 249 (442)
Q Consensus 224 ------d--------~~~Le~~l~~~~-~~~~~---------------------------------------a~~~g~~G 249 (442)
+ .+++++.+.+.. ..... ..+||
T Consensus 190 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfG--- 266 (456)
T PRK07480 190 GEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFG--- 266 (456)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC---
Confidence 1 245554443221 11100 33444
Q ss_pred cCCCc-cccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCC--ceeccCCCcHHHHHHHHHHHHHHh
Q 013461 250 RSGRG-LTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS--GYVFSASLPPYLASAAITAIDVLE 323 (442)
Q Consensus 250 ~~g~g-~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~--~~~~s~s~~p~~aaaa~aal~~l~ 323 (442)
++|.+ ..+++|+.|| +.+|+|++|. +.|.+++++++++.+..... ....+.+.+|+.|++++++|++++
T Consensus 267 RtG~~~a~~~~gv~PD-----iv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~ 341 (456)
T PRK07480 267 RTGEWFGSQHFGIKPD-----LMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILR 341 (456)
T ss_pred cCcchhhhhhcCCCCC-----eeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHH
Confidence 44544 4678999885 4569999973 24667889999988742111 112334558999999999999998
Q ss_pred cChHHHHHH-HHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchh--h-HHHHHHHHHHHHHhCCEEEeecc
Q 013461 324 ENPDLITKL-KKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKN--D-LQLLEDIADWALKEDGVFVVTSK 397 (442)
Q Consensus 324 ~~~~~~~~l-~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~--~-~~~~~~i~~~~L~~~GV~v~~~~ 397 (442)
+. ++.+++ +++.++|++.|+++....+.. ...+.++.+.+..+.....+ + ......+...++ ++||++.+..
T Consensus 342 ~~-~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~~ 419 (456)
T PRK07480 342 DE-GIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCF-ANGLIMRAVG 419 (456)
T ss_pred hC-CHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHH-HCCcEEeecC
Confidence 64 488888 589999999887652222111 13566777777432211100 1 112234555555 4699986521
Q ss_pred CcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 398 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 398 ~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
..+|++++..+|++|||+++++|++++.++.+
T Consensus 420 ----------~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 420 ----------DRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred ----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23999999999999999999999999987643
No 81
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=6.4e-25 Score=220.82 Aligned_cols=320 Identities=20% Similarity=0.258 Sum_probs=217.9
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ....++ +||+|.+|+.+++++....+.. .-..+...+|.++|++..+
T Consensus 36 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~~~~~~~~lAe~L~~~~p 111 (441)
T PRK05769 36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLT----DFYYEPAVELAERLVEIAP 111 (441)
T ss_pred CCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCc----ccCCHHHHHHHHHHHHhCC
Confidence 46789999999999 599999999654 444455 4899999999999985432211 1135677899999999875
Q ss_pred ---CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecC-------
Q 013461 169 ---TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKH------- 222 (442)
Q Consensus 169 ---~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~------- 222 (442)
.+++.+++||++|++.|++. +.++..+|.+...+|+.+..++.+++.. +..+++
T Consensus 112 ~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (441)
T PRK05769 112 GGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNP 191 (441)
T ss_pred CCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCcccccc
Confidence 46889999999999999963 4677788899999999887777665321 222222
Q ss_pred -C--C--------HHHHHH-HHHhh--cccccc----------------------------cccc---------cccccC
Q 013461 223 -N--D--------MDSLRN-TLERV--TADNKR----------------------------SNSF---------GVLGRS 251 (442)
Q Consensus 223 -~--d--------~~~Le~-~l~~~--~~~~~~----------------------------a~~~---------g~~G~~ 251 (442)
+ | .+.+++ +++.. ...... .|+. | +|++
T Consensus 192 ~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG-~gr~ 270 (441)
T PRK05769 192 WGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTG-MGRT 270 (441)
T ss_pred ccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC-CCcc
Confidence 1 1 123555 33221 111100 1111 2 3455
Q ss_pred CCc-cccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHH
Q 013461 252 GRG-LTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL 328 (442)
Q Consensus 252 g~g-~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~ 328 (442)
|.+ ..+++|+.| |++ +|||++|. +.|++++++++++... ..+..+| +.+|+.+++++++|+++++ ++
T Consensus 271 G~~~a~~~~gv~p---Div--t~~K~l~~G~p~gav~~~~~i~~~~~-~~~~~T~--~g~p~~~aaa~a~L~~l~~--~~ 340 (441)
T PRK05769 271 GKMFAIEHFGVEP---DII--TLAKAIAGGLPLGAVIGRAELMFLPP-GSHANTF--GGNPVAAAAALATLEELEE--GL 340 (441)
T ss_pred cceehhhccCCCC---CEE--EEcccccCCcccEEEEEehhhhhcCC-CCCCCCC--CcCHHHHHHHHHHHHHHHH--HH
Confidence 655 357788877 454 59999974 2488999999875432 2233333 4589999999999999987 68
Q ss_pred HHHHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC
Q 013461 329 ITKLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 405 (442)
Q Consensus 329 ~~~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~ 405 (442)
.+++++++++|++.|+++. .+.+.. ...+.++.+.+..+.. +.+......+.+.+++ +||++.+...
T Consensus 341 ~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~--~~~~~~~~~~~~~~~~-~Gil~~~~~~------- 410 (441)
T PRK05769 341 LENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRK--EPDPKLRDKVLYEAFK-RGLLLLGAGK------- 410 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCc--cccHHHHHHHHHHHHh-CCcEEecCCC-------
Confidence 9999999999999997651 122221 2245677777743211 1122345567776554 5999865321
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 406 LPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 406 ~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+.+|++++..+|++||+++++++++++.+++
T Consensus 411 --~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 441 (441)
T PRK05769 411 --SAIRIIPPLIITEEEADIGLEILEEAIKELL 441 (441)
T ss_pred --CEEEEeCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 3499999999999999999999999987653
No 82
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.95 E-value=1.5e-25 Score=223.92 Aligned_cols=312 Identities=16% Similarity=0.170 Sum_probs=213.8
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh-
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL- 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~- 167 (442)
.|.++++++|.|+| .||++||||.++ ...+++ +||+|.+|+++++++.+..+. .....+...+|.++|++..
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~lae~l~~~~~ 92 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS----LDMATEAKREFLETFNEIIL 92 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceec----cccCcHHHHHHHHHHHHhcc
Confidence 36789999999999 599999999654 334444 489999999999987554322 1124577788999999874
Q ss_pred -C--CC-cEEEE-cchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecC-----
Q 013461 168 -G--TP-DSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKH----- 222 (442)
Q Consensus 168 -g--~e-~~i~~-~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~----- 222 (442)
+ .. ++.++ +||++|++.|++. +.+|..+|.+...+|+.+..++.+++. .+..+|.
T Consensus 93 ~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 172 (412)
T TIGR02407 93 KPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLG 172 (412)
T ss_pred CccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccc
Confidence 2 22 45565 7999999999964 356777888999999998877776542 1233343
Q ss_pred ---CCHHHHHHHHHhhcc---cccc---------------------------------------cccccccccCCCc-cc
Q 013461 223 ---NDMDSLRNTLERVTA---DNKR---------------------------------------SNSFGVLGRSGRG-LT 256 (442)
Q Consensus 223 ---~d~~~Le~~l~~~~~---~~~~---------------------------------------a~~~g~~G~~g~g-~~ 256 (442)
++++.+++++++... .... ..++ |++|.+ ..
T Consensus 173 ~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~---GRtG~~~a~ 249 (412)
T TIGR02407 173 GDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGC---GRTGTFFSF 249 (412)
T ss_pred cchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC---CccchhHHh
Confidence 346678888764321 0000 2233 444544 34
Q ss_pred cccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHH-HhcChHHHHHH
Q 013461 257 EHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV-LEENPDLITKL 332 (442)
Q Consensus 257 ~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~-l~~~~~~~~~l 332 (442)
+++++.|| +.+|||++|..| |++++++++ +.+....+. .+.+.+|+.++++.++++. +++ +++.+++
T Consensus 250 ~~~~v~PD-----i~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~--~T~~gnpl~~aaa~a~l~~~i~~-~~l~~~~ 320 (412)
T TIGR02407 250 EPAGIEPD-----IVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHN--GTFRGNNLAFVTATAALEYYWSD-DAFEKAV 320 (412)
T ss_pred cccCCCCC-----EEEechhccCCccceeEEEEchhh-hccCCCccC--CCCCccHHHHHHHHHHHHHHhcc-cHHHHHH
Confidence 67888875 446999998534 788888876 544322222 2334589999999999995 654 5588999
Q ss_pred HHHHHHHHHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 333 KKNTAILRTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 333 ~~~~~~l~~~L~~~----~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
+++++++++.|+.+ +++.......+.++++.+.+. ....++...++ ++||++.+.... .+
T Consensus 321 ~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~--------~~~~~~~~~~~-~~Gv~v~~~~~~-------~~ 384 (412)
T TIGR02407 321 QRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDG--------DLAGKIAKAAF-ENGLIIETSGPN-------DE 384 (412)
T ss_pred HHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecCh--------HHHHHHHHHHH-HCCCEEeccCCC-------CC
Confidence 99999998888653 222222233567888888431 23446777655 569999764221 24
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.||++++..+|++|+++++++++++++
T Consensus 385 ~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 385 VIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 599999999999999999999999875
No 83
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=4.2e-25 Score=221.36 Aligned_cols=321 Identities=17% Similarity=0.199 Sum_probs=218.9
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
|.++++++|.|+| +||++||||.++ ....++ +||+|.+++.++++++..... .....+...++.++|+++.+
T Consensus 23 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p~ 98 (421)
T PRK06777 23 DFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY----QIVPYASYVTLAERINALAPI 98 (421)
T ss_pred CeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc----cccCChHHHHHHHHHHHhCCC
Confidence 6788999999999 599999999654 323344 489999999999998542211 11245677899999999875
Q ss_pred --CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecCC-------
Q 013461 169 --TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN------- 223 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~~------- 223 (442)
.+++.+++||++|++.|++. +++|..+|.+...+|+.+..++.+++.. +..++.+
T Consensus 99 ~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 178 (421)
T PRK06777 99 DGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVS 178 (421)
T ss_pred CCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcC
Confidence 36899999999999999963 4577778899999999988777665421 1111222
Q ss_pred ---CHHHHHHHHHhh--cccccc----------------------------cccccc--------cccCCCc-cccccCC
Q 013461 224 ---DMDSLRNTLERV--TADNKR----------------------------SNSFGV--------LGRSGRG-LTEHCGV 261 (442)
Q Consensus 224 ---d~~~Le~~l~~~--~~~~~~----------------------------a~~~g~--------~G~~g~g-~~~~~~v 261 (442)
++++++++++.. .+.... .|++-+ +|++|.+ ..+++++
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~ 258 (421)
T PRK06777 179 VEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDV 258 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCC
Confidence 255677777531 111100 111100 2344443 3467787
Q ss_pred CCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 013461 262 PVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAIL 339 (442)
Q Consensus 262 ~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l 339 (442)
.|| ++ ||||++|. +.|++++++++++.+...... .+.+.+|+.+++++++|+.+++ +++.++++++++++
T Consensus 259 ~pD---iv--~~sK~l~~G~pigav~~~~~i~~~~~~~~~~--~T~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l 330 (421)
T PRK06777 259 KPD---LI--TMAKSLGGGMPISAVVGRAEVMDAPAPGGLG--GTYAGNPLAVAAALAVLDVIAE-EKLCQRALILGAHL 330 (421)
T ss_pred CCC---EE--eeehhhcCCCceEEEEEcHHHHhccCCCCCC--CCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 764 44 69999972 237899999999887644333 3344699999999999998876 45899999999999
Q ss_pred HHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEec
Q 013461 340 RTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS 415 (442)
Q Consensus 340 ~~~L~~~----~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~ 415 (442)
++.|+++ +.+... .+.+.++.+.+..+... .++......+...++ ++||++.++..+ .+.+||+++
T Consensus 331 ~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~~~-~~~~~~~~~l~~~~~-~~Gv~i~~~~~~-------g~~lr~~pp 400 (421)
T PRK06777 331 VEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQTG-KPSPEFTRQYQRQAL-EEGLLLLSCGVH-------GNVIRFLYP 400 (421)
T ss_pred HHHHHHHHHhCCCeEEe-cCceEEEEEEEecCccC-CccHHHHHHHHHHHH-hCCeEEeecCCC-------CCEEEEeCC
Confidence 9999875 222212 34566666666432111 112233455666545 469999875432 135999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 013461 416 AAHSEADLVKACESLKRISA 435 (442)
Q Consensus 416 ~~~t~eei~~~i~~l~~~~~ 435 (442)
...|++++++++++|++++.
T Consensus 401 l~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 401 LTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999998763
No 84
>PLN00144 acetylornithine transaminase
Probab=99.95 E-value=8.7e-26 Score=223.60 Aligned_cols=307 Identities=18% Similarity=0.207 Sum_probs=219.7
Q ss_pred eecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcE
Q 013461 96 LESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDS 172 (442)
Q Consensus 96 ~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~ 172 (442)
+++++|.|+| +||++||||.++ ....++ +||+|.+++.+++++....+. ....+...++.++|++..+.+++
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~v 75 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSN-----VYHTIPQVELAKRLVASSFADRV 75 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccc-----cccCHHHHHHHHHHHhcCCCCeE
Confidence 4678999999 599999999655 334444 489999999999998543221 12356778999999998888899
Q ss_pred EEEcchHHHHHhhhhhh---cc-------------CCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCC
Q 013461 173 ILYSYGLSTMFSAIPCF---CK-------------KGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND 224 (442)
Q Consensus 173 i~~~sG~~a~~~ai~a~---~~-------------~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d 224 (442)
++++||++|++.|++.. .+ +..+|.+...+|+.+..++.+++. .+..+++||
T Consensus 76 ~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d 155 (382)
T PLN00144 76 FFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGN 155 (382)
T ss_pred EEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCC
Confidence 99999999999999743 22 345788899999988777765542 235677889
Q ss_pred HHHHHHHHHhhcccc----------------c--c--------cccccc--------cccCCCcc-ccccCCCCCceeEE
Q 013461 225 MDSLRNTLERVTADN----------------K--R--------SNSFGV--------LGRSGRGL-TEHCGVPVDKIDIV 269 (442)
Q Consensus 225 ~~~Le~~l~~~~~~~----------------~--~--------a~~~g~--------~G~~g~g~-~~~~~v~~~~~dii 269 (442)
++++++.++...... . . .|++-+ +|++|.+. .+++++.||
T Consensus 156 ~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD----- 230 (382)
T PLN00144 156 LEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD----- 230 (382)
T ss_pred HHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----
Confidence 999998875311100 0 0 122111 24455433 357888875
Q ss_pred EEecccccc--CCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC-
Q 013461 270 TAAMGHALA--TEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI- 346 (442)
Q Consensus 270 i~S~sK~lg--~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~- 346 (442)
+.||||+++ .+.|++++++++++.+...... .+.+.+|+.++++.++|+++++ +++.++++++++++++.|.++
T Consensus 231 i~t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~--~T~~~~pl~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 231 IMTLAKPLAGGLPIGAVLVTEKVASAINPGDHG--STFAGGPLVCNAALAVLDKISK-PGFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred EEEecccccCCcceEEEEEcHHHHhccCCCCCC--CCCCCCHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHH
Confidence 778999995 3458999999999887644333 3445689999999999999975 458888899988888877653
Q ss_pred ---CCc-eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHH
Q 013461 347 ---HGL-SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 422 (442)
Q Consensus 347 ---~g~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~ee 422 (442)
+.+ .+. ..+.++++.+..+ ..++.+.++ ++||.+.+... .+.||++++..+|++|
T Consensus 308 ~~~~~~~~vr--g~G~~~~l~l~~~----------~~~~~~~~~-~~Gv~i~~~~~--------~~~lrl~p~~~~~~~~ 366 (382)
T PLN00144 308 GGNPHVKEVR--GVGLLVGIQLDVP----------AGPLVDACR-DSGLLVLTAGK--------GDVVRLVPPLVISEAE 366 (382)
T ss_pred hhCCCceeee--cCceEEEEEecCc----------cHHHHHHHH-HCCeEEeecCC--------CCEEEEeCCCccCHHH
Confidence 222 222 3677888887211 135677655 56999987522 1459999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 013461 423 LVKACESLKRISAV 436 (442)
Q Consensus 423 i~~~i~~l~~~~~~ 436 (442)
+++++++|++++.+
T Consensus 367 i~~~~~~l~~~l~~ 380 (382)
T PLN00144 367 LEQAVEILADCLPA 380 (382)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 85
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.95 E-value=3.1e-25 Score=223.88 Aligned_cols=323 Identities=15% Similarity=0.155 Sum_probs=217.8
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
.|.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+++++++ ..... ..-+.+...+|.++|++.+
T Consensus 45 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-----~~~~~~~~~~la~~L~~~~ 119 (464)
T PRK06938 45 IPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHT-----LDLTTPVKDQFVQDLFASL 119 (464)
T ss_pred CCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccc-----cccCCHHHHHHHHHHHHhC
Confidence 46789999999999 599999999554 445555 489999999999975 21111 1124677788999999887
Q ss_pred CC-----CcEEEE-cchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC------------eEE--EecCC-
Q 013461 168 GT-----PDSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVV--YFKHN- 223 (442)
Q Consensus 168 g~-----e~~i~~-~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~--~~~~~- 223 (442)
+. +.++++ +||++|++.|++. +.+|..+|.+...+|+.+..++.+++. .+. .++++
T Consensus 120 p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~ 199 (464)
T PRK06938 120 PEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDY 199 (464)
T ss_pred cccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccc
Confidence 53 256666 6999999999964 457778899999999988777765542 122 22222
Q ss_pred --------------CHHHHHHHHHhhcc---cccc---------------------------------------cccccc
Q 013461 224 --------------DMDSLRNTLERVTA---DNKR---------------------------------------SNSFGV 247 (442)
Q Consensus 224 --------------d~~~Le~~l~~~~~---~~~~---------------------------------------a~~~g~ 247 (442)
+.+.+++++++... .... ..+||+
T Consensus 200 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGR 279 (464)
T PRK06938 200 RCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGR 279 (464)
T ss_pred cccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 14567777764321 1100 344444
Q ss_pred cccCCC-ccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc
Q 013461 248 LGRSGR-GLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE 324 (442)
Q Consensus 248 ~G~~g~-g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~ 324 (442)
+|. +..+++|+.|| | .+++|++|. +-|.+++++++ +.+....+. .+.+.+|+.|++++++|+++++
T Consensus 280 ---tG~~~a~e~~gv~PD---i--v~~gKglggG~PlsAv~~~~~~-~~~~~~~~~--~T~~gnpla~Aaa~a~L~~l~~ 348 (464)
T PRK06938 280 ---TGKMFAFEHAGIIPD---V--VVLSKAIGGSLPLAVVVYREWL-DTWQPGAHA--GTFRGNQMAMAAGSATLRYIKE 348 (464)
T ss_pred ---CcHHHHHHhcCCCCC---E--EEeeccccCCCceEEEeehhHh-hccCCCCCC--CCCCcCHHHHHHHHHHHHHHHH
Confidence 443 45688999985 4 459999972 22557777774 544322222 3335689999999999999976
Q ss_pred ChHHHHHHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCC------chhhHHHHHHHHHHHHHhCCEEEee
Q 013461 325 NPDLITKLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGS------MKNDLQLLEDIADWALKEDGVFVVT 395 (442)
Q Consensus 325 ~~~~~~~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~------~~~~~~~~~~i~~~~L~~~GV~v~~ 395 (442)
. ++.+++++++++|++.|+++. ..++.. ...+.++.+.+..+... ...+......+...+++ +|+++.+
T Consensus 349 ~-~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~ 426 (464)
T PRK06938 349 H-RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILEL 426 (464)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEee
Confidence 4 588999999999999997651 122211 23567778877533211 01122334567776664 6999875
Q ss_pred ccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 396 SKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 396 ~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
.... .+.||+.++..+|++|++++++++++++.++..
T Consensus 427 ~g~~-------~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 463 (464)
T PRK06938 427 GGRH-------GSVVRFLPPLIITAEQIDEVAEIFAEAVAAAVA 463 (464)
T ss_pred cCCC-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 4211 134999999999999999999999999987653
No 86
>PRK07481 hypothetical protein; Provisional
Probab=99.95 E-value=4e-25 Score=222.84 Aligned_cols=323 Identities=18% Similarity=0.188 Sum_probs=216.3
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ....++ +||+|.+|+.+++++....+. ....+.+...++.++|++.++
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~---~~~~~~~~~~~lae~L~~~~~ 100 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST---FDGTTHPRAIELSYELIDMFA 100 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec---ccccCCHHHHHHHHHHHHhcC
Confidence 36788999999999 599999999653 223344 489999999999998543211 111246788899999999884
Q ss_pred ---CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe------------EEEe----
Q 013461 169 ---TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST------------VVYF---- 220 (442)
Q Consensus 169 ---~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~---- 220 (442)
.+++.+++||++|++.|++... +|..+|.+...+|+.+..++.+++.. +..+
T Consensus 101 ~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~ 180 (449)
T PRK07481 101 PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPW 180 (449)
T ss_pred CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCc
Confidence 4678999999999999997432 35568889999999877666554321 1111
Q ss_pred ----cCC--CHHHH--------HHHHHhhc-ccccc---------------------------------------ccccc
Q 013461 221 ----KHN--DMDSL--------RNTLERVT-ADNKR---------------------------------------SNSFG 246 (442)
Q Consensus 221 ----~~~--d~~~L--------e~~l~~~~-~~~~~---------------------------------------a~~~g 246 (442)
+.| |.+.+ |+.+.... +.... ..++|
T Consensus 181 ~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfG 260 (449)
T PRK07481 181 LYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFG 260 (449)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcC
Confidence 123 44443 33332111 11100 33444
Q ss_pred ccccCCC-ccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCC-----ceeccCCCcHHHHHHHHH
Q 013461 247 VLGRSGR-GLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSS-----GYVFSASLPPYLASAAIT 317 (442)
Q Consensus 247 ~~G~~g~-g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~-----~~~~s~s~~p~~aaaa~a 317 (442)
++|. +..+++|+.|| | .+++|++|. +-|.+++++++++.+..... ....+.+.+|+.|+++++
T Consensus 261 ---RtG~~~a~~~~gv~PD---i--v~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a 332 (449)
T PRK07481 261 ---RTGSWFGSRGWGVKPD---I--MCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALA 332 (449)
T ss_pred ---cCchhhHhhhcCCCCC---E--EEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHH
Confidence 4443 34578999885 4 459999963 34668899999988753210 112233458999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCc---hhhHHHHHHHHHHHHHhCCE
Q 013461 318 AIDVLEENPDLITKLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSM---KNDLQLLEDIADWALKEDGV 391 (442)
Q Consensus 318 al~~l~~~~~~~~~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~---~~~~~~~~~i~~~~L~~~GV 391 (442)
+|+++++. ++.++++++.++|++.|+++. ..++.. ...+.++.+.+..+.... ........++...+++ +||
T Consensus 333 ~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv 410 (449)
T PRK07481 333 TLDIVVRE-DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARE-NGV 410 (449)
T ss_pred HHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHh-CCe
Confidence 99999764 588999999999999997652 122211 234667777774321111 0112234567776554 699
Q ss_pred EEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 392 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 392 ~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
++.+.. ..+|++++..+|++|||+++++++++++++
T Consensus 411 l~~~~g----------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 411 LVRPSG----------TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 987642 128999999999999999999999998765
No 87
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.95 E-value=6.8e-25 Score=221.07 Aligned_cols=324 Identities=15% Similarity=0.157 Sum_probs=215.3
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~ 169 (442)
|+++++++|.|+| .||++||||.++ ....++ +||+|.+|+.+++++....+. .+-..+...+|.++|++.++.
T Consensus 22 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~ 97 (442)
T TIGR00709 22 PTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT----LDLTTPLKDAFIEALLNIIPK 97 (442)
T ss_pred CceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhCCC
Confidence 6789999999999 599999999654 334444 489999999999987332221 112457888999999998853
Q ss_pred ----CcEEEE-cchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCC-----
Q 013461 170 ----PDSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND----- 224 (442)
Q Consensus 170 ----e~~i~~-~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d----- 224 (442)
...+++ +||++|++.|++. +.+|..+|.+...+|+.+..++.+++. .+..++..+
T Consensus 98 ~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (442)
T TIGR00709 98 RKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCP 177 (442)
T ss_pred cCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcccccc
Confidence 245555 7999999999964 457778899999999998877776541 122222221
Q ss_pred --------HH----HHHHHHHhhc---ccccc---------------------------------------ccccccccc
Q 013461 225 --------MD----SLRNTLERVT---ADNKR---------------------------------------SNSFGVLGR 250 (442)
Q Consensus 225 --------~~----~Le~~l~~~~---~~~~~---------------------------------------a~~~g~~G~ 250 (442)
.+ .+++.++... ..... ..+||+.|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 257 (442)
T TIGR00709 178 FGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT 257 (442)
T ss_pred ccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc
Confidence 11 2333333211 11000 344444332
Q ss_pred CCCccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHH
Q 013461 251 SGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL 328 (442)
Q Consensus 251 ~g~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~ 328 (442)
.+..+++|+.| ||++ +||++|. +-|+++++++ ++.+....+. .+.+.+|+.+++++++|+.+++. ++
T Consensus 258 --~~a~~~~gv~P---Div~--~gK~l~~G~Pigav~~~~~-~~~~~~~~~~--~T~~gnpla~aaa~a~L~~i~~~-~l 326 (442)
T TIGR00709 258 --MFAFEHAGIEP---DFVV--MSKAVGGGLPLAVLLIAPE-FDAWQPAGHT--GTFRGNQLAMVTGTEALNYWKDD-NL 326 (442)
T ss_pred --hhHHHHcCCCC---cEEE--EcccccCCcccEEEEEchH-HhccCCCcCC--CCCCcCHHHHHHHHHHHHHHHhc-CH
Confidence 23457789987 4555 9999974 2367888887 4544322222 33456899999999999998764 48
Q ss_pred HHHHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCC------chhhHHHHHHHHHHHHHhCCEEEeeccCc
Q 013461 329 ITKLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGS------MKNDLQLLEDIADWALKEDGVFVVTSKRS 399 (442)
Q Consensus 329 ~~~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~------~~~~~~~~~~i~~~~L~~~GV~v~~~~~~ 399 (442)
.+++++++++|.+.|+++. ..++.. ...+.++.+.+..+... ...+......+...++ ++||++.+....
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~ 405 (442)
T TIGR00709 327 AQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGRE 405 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCCC
Confidence 8999999999999997651 222211 23567778877533111 1112223456776655 469998754221
Q ss_pred ccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 400 MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 400 ~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
...||+.++..+|++|++++++++++++.++++
T Consensus 406 -------~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 406 -------GEVFRLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred -------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 134999999999999999999999999988754
No 88
>PRK07483 hypothetical protein; Provisional
Probab=99.94 E-value=6.7e-25 Score=220.63 Aligned_cols=332 Identities=16% Similarity=0.129 Sum_probs=222.2
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ....++ +||+|.+++++++++......+ . -+.+...+|.++|++..+
T Consensus 12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~---~-~~~~~~~~lae~L~~~~p 87 (443)
T PRK07483 12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS---F-FTTEPAEALADRLVAAAP 87 (443)
T ss_pred CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc---c-cCCHHHHHHHHHHHHhCC
Confidence 47889999999999 599999999654 334444 4899999999999985321111 1 235777899999999874
Q ss_pred --CCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEec----
Q 013461 169 --TPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFK---- 221 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~---- 221 (442)
.+++.+++||++|++.|++.. .+|..+|.+...+|+.+..++.+++.. +..++
T Consensus 88 ~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~ 167 (443)
T PRK07483 88 AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYA 167 (443)
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcc
Confidence 478899999999999999643 234457888999999988777765421 11111
Q ss_pred CCCH--------------HHHHHHHHhhc-cccc--------------c--------------------------ccccc
Q 013461 222 HNDM--------------DSLRNTLERVT-ADNK--------------R--------------------------SNSFG 246 (442)
Q Consensus 222 ~~d~--------------~~Le~~l~~~~-~~~~--------------~--------------------------a~~~g 246 (442)
+++. +++++.+.... +... . ..++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfG 247 (443)
T PRK07483 168 YREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMG 247 (443)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcc
Confidence 2221 45666554211 1100 0 34444
Q ss_pred ccccCCC-ccccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhCCc--eeccCCCcHHHHHHHHHHHH
Q 013461 247 VLGRSGR-GLTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSSSG--YVFSASLPPYLASAAITAID 320 (442)
Q Consensus 247 ~~G~~g~-g~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~~~--~~~s~s~~p~~aaaa~aal~ 320 (442)
++|. +..+++|+.|| +.+++|++|. +.|.+++++++++.+...... +..+.+.+|+.+++++++|+
T Consensus 248 ---RtG~~~a~~~~gv~PD-----iv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~ 319 (443)
T PRK07483 248 ---RTGTLFACEEDGVAPD-----LVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQR 319 (443)
T ss_pred ---cCcHHHHHhhcCCCCC-----eeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 4454 34578999885 4459999962 346688899998887543211 11233458999999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHHhhccC-CCceeec--CCCCCEEEEEecCCCCCch---hhHHHHHHHHHHHHHhCCEEEe
Q 013461 321 VLEENPDLITKLKKNTAILRTGLSDI-HGLSIAS--NPESPIVFLILEKSTGSMK---NDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 321 ~l~~~~~~~~~l~~~~~~l~~~L~~~-~g~~~~~--~~~~~i~~~~~~~~~~~~~---~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
++++. ++.+++++++++|++.|+++ ...++.. ...+.++.+.+..+....+ .+.....++.+.+++ +||++.
T Consensus 320 ~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~ 397 (443)
T PRK07483 320 VIAED-GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMA-RGLMVY 397 (443)
T ss_pred HHHhc-CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHH-CCcEEE
Confidence 99875 48999999999999999753 2222111 2356677777743221111 111234567776665 599997
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+........ .++.||+.++..+|++|||+++++|++++.+++.
T Consensus 398 ~~~~~~~~~--~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 398 PMGGTIDGV--RGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred ecCccccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 642210000 0235999999999999999999999999988654
No 89
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=2.6e-25 Score=220.01 Aligned_cols=290 Identities=17% Similarity=0.129 Sum_probs=202.5
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCc-----HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCC
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTI-----DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADE 200 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~-----~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~ 200 (442)
-.+++++.+++++||.++++++...|+. +...++++.+|+++|.+.++++++|++++..++.++.++||.|+++.
T Consensus 18 g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~ 97 (370)
T TIGR02539 18 GVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDG 97 (370)
T ss_pred CCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECC
Confidence 3688999999999999988877766655 35667788899999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc----cccc----------------------------
Q 013461 201 GVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA----DNKR---------------------------- 241 (442)
Q Consensus 201 ~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~----~~~~---------------------------- 241 (442)
+.|++.+.+++..|++++.++++ |+++|++.+++.+. ..+.
T Consensus 98 ~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~ 177 (370)
T TIGR02539 98 LAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGV 177 (370)
T ss_pred cccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCC
Confidence 99999999999999999999986 89999998865221 1111
Q ss_pred ------cccccccccCCCccccccCCCCCceeEEEEeccccccCCC--cEEEcCHHhHHHHHhhCCceeccCC------C
Q 013461 242 ------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG--GFCTGSARVVDHQRLSSSGYVFSAS------L 307 (442)
Q Consensus 242 ------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G--G~v~g~~~~i~~l~~~~~~~~~s~s------~ 307 (442)
+|++|.++.+ ....++|++++|++|++|+.| ||+++++++++.++....+|.++.. .
T Consensus 178 ~livDea~~~g~~~~~---------~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 248 (370)
T TIGR02539 178 PLLLNCAYTVGRMPVS---------AKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTS 248 (370)
T ss_pred eEEEECccccCCcCCC---------HHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccc
Confidence 2222211110 111346899999999998766 9999999999998876655544221 1
Q ss_pred cHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHH
Q 013461 308 PPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWA 385 (442)
Q Consensus 308 ~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~ 385 (442)
++..++++.++++...+.-+...+..++.+++++.|+++ |+++. .++.++++.+.++........+......+.+.
T Consensus 249 ~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~- 326 (370)
T TIGR02539 249 RGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEE- 326 (370)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHH-
Confidence 112333445566543222222334455567899999987 88763 24578888877632100000011123356664
Q ss_pred HHhCCEE-EeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 386 LKEDGVF-VVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 386 L~~~GV~-v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
|.++||. ++++. +..+|+++. .+|++|+++++++|++++++
T Consensus 327 L~e~GI~~ir~~~---------~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 327 LKKRGIHGIRSGQ---------TKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHhCCCccccCCc---------ceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 5566997 44211 235999984 67999999999999988654
No 90
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.94 E-value=5.5e-25 Score=218.72 Aligned_cols=307 Identities=21% Similarity=0.304 Sum_probs=213.4
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
.|.++++++|.++| .||+++|||++ ++++|+ .+|.+.+++.+++.+++..+ +. ...+.+.++++++++++
T Consensus 9 ~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~~--~~~~~~~~l~~~la~~~ 82 (379)
T TIGR00707 9 LPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHVS---NL--YYTEPQEELAEKLVEHS 82 (379)
T ss_pred CCccEEEeecCEEEeCCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhccccc---cc--cCCHHHHHHHHHHHhhC
Confidence 46788999999999 59999999987 688997 58999999999999865321 11 24578999999999999
Q ss_pred CCCcEEEEcchHHHHHhhhhhh---cc----CCCEEEe-CCCchHHHHHHHHhcC------------CeEEEecCCCHHH
Q 013461 168 GTPDSILYSYGLSTMFSAIPCF---CK----KGDLIVA-DEGVHWGIQNGLYLSR------------STVVYFKHNDMDS 227 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a~---~~----~gd~Vi~-~~~~h~s~~~~~~l~g------------~~v~~~~~~d~~~ 227 (442)
|.++++++++|++++..+++++ .+ ++|.|++ +..+|.....+....+ .....+++||+++
T Consensus 83 g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 162 (379)
T TIGR00707 83 GADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIES 162 (379)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHH
Confidence 9999999999999999988755 23 3566555 5556655544443322 1234566789999
Q ss_pred HHHHHHhhcccc-------------cc------------cccccc--------cccCCCccc-cccCCCCCceeEEEEec
Q 013461 228 LRNTLERVTADN-------------KR------------SNSFGV--------LGRSGRGLT-EHCGVPVDKIDIVTAAM 273 (442)
Q Consensus 228 Le~~l~~~~~~~-------------~~------------a~~~g~--------~G~~g~g~~-~~~~v~~~~~diii~S~ 273 (442)
+++.+.+..... .. .|+.-+ +|.+|.+.. ...++.+ |+ .||
T Consensus 163 l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~---d~--~t~ 237 (379)
T TIGR00707 163 LKKAIDDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEP---DI--ITL 237 (379)
T ss_pred HHHHhhhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCC---CE--EEE
Confidence 988876422100 00 111111 223333222 3345544 33 479
Q ss_pred cccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCcee
Q 013461 274 GHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSI 351 (442)
Q Consensus 274 sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 351 (442)
||+++. +.||+++++++++.++.......+ +.+|+.++++.++|+.++. .+..++++++++++++.|.++ +...
T Consensus 238 sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~aaL~~~~~-~~~~~~~~~~~~~~~~~l~~~-~~~~ 313 (379)
T TIGR00707 238 AKGLGGGVPIGATLAKEEVAEAFTPGDHGSTF--GGNPLACAAALAVLEVIEK-ERLLENVKEKGDYFKERLEEL-GKNY 313 (379)
T ss_pred cccccCCcccEEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-HhhC
Confidence 999982 248999999999988754333334 3578888889999988764 357889999999999988765 2221
Q ss_pred --e-cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHH
Q 013461 352 --A-SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACE 428 (442)
Q Consensus 352 --~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~ 428 (442)
. ..+.+.++++.++.+ ..++.+. |.++||.+.+.. ++.+|++++..+|++|++++++
T Consensus 314 ~~~~~~~~g~~~~~~~~~~----------~~~~~~~-l~~~Gv~v~~~~---------~~~lRi~~~~~~t~~~i~~~~~ 373 (379)
T TIGR00707 314 PNKEVRGKGLMLGIELEAP----------CKDIVKK-ALEKGLLVNCAG---------PKVLRFLPPLIITKEEIDEAVS 373 (379)
T ss_pred CCCccccCceEEEEEecCc----------HHHHHHH-HHHCCcEEeeCC---------CCEEEEECCCcCCHHHHHHHHH
Confidence 1 123466777776321 2356765 556799998742 1359999999899999999999
Q ss_pred HHHHH
Q 013461 429 SLKRI 433 (442)
Q Consensus 429 ~l~~~ 433 (442)
+|+++
T Consensus 374 ~l~~~ 378 (379)
T TIGR00707 374 ALEEA 378 (379)
T ss_pred HHHHh
Confidence 99875
No 91
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=3.8e-25 Score=219.38 Aligned_cols=301 Identities=17% Similarity=0.197 Sum_probs=210.4
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh-CC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL-GT 169 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~-g~ 169 (442)
|.++.+++|.|+| .||++||||.|+ +++++++||++++++.+++++++...+ ..+.++++++|+.+ +.
T Consensus 12 ~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~---------~~~~~~~~~la~~l~~~ 82 (375)
T PRK04260 12 AIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPN---------LYLNSLQEEVAQKLIGD 82 (375)
T ss_pred CceEEEeeeCEEEeCCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccC---------ccCCHHHHHHHHHHhcC
Confidence 5678999999999 599999999776 688999999999999999987542211 12345667777654 32
Q ss_pred -C-cEEEEcchHHHHHhhhhhh---ccCCCEEEeCCCchHHHHHHHHhcCCe------------EEEecCCCHHHHHHHH
Q 013461 170 -P-DSILYSYGLSTMFSAIPCF---CKKGDLIVADEGVHWGIQNGLYLSRST------------VVYFKHNDMDSLRNTL 232 (442)
Q Consensus 170 -e-~~i~~~sG~~a~~~ai~a~---~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v~~~~~~d~~~Le~~l 232 (442)
+ .+++++||++|+..+++.. .++.++|.++..+|+++..++.+++.. +...+++|++++++.+
T Consensus 83 ~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l 162 (375)
T PRK04260 83 KDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALV 162 (375)
T ss_pred cCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhc
Confidence 2 3578899999999988764 567778888999999988887665432 2233578999998877
Q ss_pred Hhhccc-----------ccc------------------------cccccccccCCCcc-ccccCCCCCceeEEEEecccc
Q 013461 233 ERVTAD-----------NKR------------------------SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHA 276 (442)
Q Consensus 233 ~~~~~~-----------~~~------------------------a~~~g~~G~~g~g~-~~~~~v~~~~~diii~S~sK~ 276 (442)
...... ... .|. | +|++|.+. .+++++.|| +.||||+
T Consensus 163 ~~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g-~g~~g~~~~~~~~~~~pd-----i~t~sK~ 235 (375)
T PRK04260 163 NKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-G-MGRTGKLYAFEHYGIEPD-----IFTLAKG 235 (375)
T ss_pred CCCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcccchhhhHhhCCCCC-----EEEeccc
Confidence 422100 000 221 2 35555443 346777764 4589999
Q ss_pred ccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC----CCce
Q 013461 277 LAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI----HGLS 350 (442)
Q Consensus 277 lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~----~g~~ 350 (442)
++. +.|++++++++++.+....... +.+.+|+.++++.++++.++.. +.+++++++.+++++.|.+. +.+.
T Consensus 236 l~~G~~ig~~~~~~~~~~~~~~~~~~~--t~~~~~~~~~aa~a~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 312 (375)
T PRK04260 236 LANGVPVGAMLAKSSLGGAFGYGSHGS--TFGGNKLSMAAASATLDIMLTA-GFLEQALENGNYLQEQLQKALQDKETVT 312 (375)
T ss_pred ccCCcceEEEEEcHHHHhhcCCCCCCC--CCCcCHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHhhCCCee
Confidence 973 4699999999988876433333 3345888999999999988654 57778888888877777543 1121
Q ss_pred eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 351 IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 351 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
.. ...+.++++.+... ..++.+++. ++||++.+.. +..+|++++..+|++|+++++++|
T Consensus 313 ~~-~~~g~~~~~~~~~~----------~~~~~~~l~-~~Gi~v~~~~---------~~~lR~~~~~~~t~~~i~~~l~~l 371 (375)
T PRK04260 313 TV-RGLGYMIGIETTAD----------LSQLVEAAR-DKGLIVLTAG---------TNVIRLLPPLTLTKEEIEQGIAIL 371 (375)
T ss_pred EE-eccceEEEEEecCc----------HHHHHHHHH-hCCCEEecCC---------CCEEEEcCCCccCHHHHHHHHHHH
Confidence 11 12567778776221 235677644 5699987542 134999999999999999999999
Q ss_pred HHH
Q 013461 431 KRI 433 (442)
Q Consensus 431 ~~~ 433 (442)
+++
T Consensus 372 ~~~ 374 (375)
T PRK04260 372 SEV 374 (375)
T ss_pred HHh
Confidence 875
No 92
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=1.4e-24 Score=217.18 Aligned_cols=312 Identities=21% Similarity=0.281 Sum_probs=217.7
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
.|+++++++|.++| .||++||||.+ ++++|. +||++.+++.+++++....+ ..+..+.+.+++++++++.
T Consensus 21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~-~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~ 94 (396)
T PRK02627 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGH-CHPKLVEAIQEQAAKLIHTS-----NLYYIEPQEELAEKLVELS 94 (396)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhccccc-----cccCCHHHHHHHHHHHhhc
Confidence 36789999999999 59999999976 355666 47999999999998753221 1124688899999999999
Q ss_pred CCCcEEEEcchHHHHHhhhhhhc---cC-----CCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHHH
Q 013461 168 GTPDSILYSYGLSTMFSAIPCFC---KK-----GDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDS 227 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a~~---~~-----gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~~ 227 (442)
|.++++++++|++|+..+++++. ++ .+++..+..+|+....++...+. .+..++++|+++
T Consensus 95 ~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (396)
T PRK02627 95 GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEA 174 (396)
T ss_pred CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHH
Confidence 99999999999999999998654 33 34677788888877666665532 235567789999
Q ss_pred HHHHHHhhccc------------ccc-------------cccccc--------cccCCCc-cccccCCCCCceeEEEEec
Q 013461 228 LRNTLERVTAD------------NKR-------------SNSFGV--------LGRSGRG-LTEHCGVPVDKIDIVTAAM 273 (442)
Q Consensus 228 Le~~l~~~~~~------------~~~-------------a~~~g~--------~G~~g~g-~~~~~~v~~~~~diii~S~ 273 (442)
+++.+.....- ... .|++-+ +|.+|.+ ..+++++.| | +.||
T Consensus 175 l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~p---d--i~t~ 249 (396)
T PRK02627 175 LKAAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEP---D--IMTL 249 (396)
T ss_pred HHHhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCC---C--EEEE
Confidence 98887431110 000 111111 2333332 234566655 3 3479
Q ss_pred cccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC-CCce
Q 013461 274 GHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI-HGLS 350 (442)
Q Consensus 274 sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~-~g~~ 350 (442)
||+++. +.|++++++++++.+........ .+.+|+.++++.++++.+++. +..++++++.+++++.|.++ ..++
T Consensus 250 sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t--~~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (396)
T PRK02627 250 AKGLGGGVPIGAVLAKEKVADVFTPGDHGST--FGGNPLACAAALAVIEIIEEE-GLLENAAEVGEYLRAKLRELLEKYP 326 (396)
T ss_pred cchhhCCcccEEEEEcHHHHhccCCCCCCCC--CCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999983 23899999999888754322323 345889999999999988653 47788888888888877654 1121
Q ss_pred ee--cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHH
Q 013461 351 IA--SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACE 428 (442)
Q Consensus 351 ~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~ 428 (442)
.. ..+.+.++++.+.. + ..+++..++++ ||++.+... ..+|++++..+|++|++++++
T Consensus 327 ~~~~~~~~g~~~~i~~~~-------~---~~~~~~~l~~~-Gv~v~~~~~---------~~lRi~~~~~~~~~~i~~~~~ 386 (396)
T PRK02627 327 GIKEVRGLGLMIGIELDR-------P---AAEIVKKALEK-GLLINVTGD---------NVLRLLPPLIISKEEIDEAVD 386 (396)
T ss_pred CeeeeccCcEEEEEEecC-------c---HHHHHHHHHHC-CeEEeecCC---------CEEEEECCcccCHHHHHHHHH
Confidence 11 12345677777621 1 34677776655 999987532 349999998899999999999
Q ss_pred HHHHHHHHH
Q 013461 429 SLKRISAVV 437 (442)
Q Consensus 429 ~l~~~~~~~ 437 (442)
+|+++++++
T Consensus 387 ~l~~~l~~~ 395 (396)
T PRK02627 387 RLEEVLKEL 395 (396)
T ss_pred HHHHHHHhh
Confidence 999988764
No 93
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.94 E-value=9.3e-25 Score=218.87 Aligned_cols=319 Identities=15% Similarity=0.210 Sum_probs=219.0
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG- 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g- 168 (442)
+.++++++|.++| +||++||||.++ ....++ +||+|.+|+.++++++..... .....+...++.++|++..+
T Consensus 23 ~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p~ 98 (421)
T PRK09792 23 NFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY----QIVPYESYVTLAEKINALAPV 98 (421)
T ss_pred CeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc----CccCCHHHHHHHHHHHHhCCC
Confidence 5778999999999 699999999543 333344 489999999999998542211 11245777899999999875
Q ss_pred --CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecC--------
Q 013461 169 --TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKH-------- 222 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~-------- 222 (442)
.+++++++||++|++.|++. +.++..+|.+...+|+.+...+.+++.. +..++.
T Consensus 99 ~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~ 178 (421)
T PRK09792 99 SGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGIS 178 (421)
T ss_pred CCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccccc
Confidence 26889999999999999964 4577778889999999887776665421 122222
Q ss_pred --CCHHHHHHHHHhh--cccccc---------------------------------------cccccccccCCCcc-ccc
Q 013461 223 --NDMDSLRNTLERV--TADNKR---------------------------------------SNSFGVLGRSGRGL-TEH 258 (442)
Q Consensus 223 --~d~~~Le~~l~~~--~~~~~~---------------------------------------a~~~g~~G~~g~g~-~~~ 258 (442)
++.+.+++++++. ...... ..++ |++|.+. .++
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~---gr~G~~~a~~~ 255 (421)
T PRK09792 179 TQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGF---ARTGKLFAMDH 255 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC---CCCCchhHHHh
Confidence 2346777777631 111000 2233 3444433 467
Q ss_pred cCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 013461 259 CGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNT 336 (442)
Q Consensus 259 ~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~ 336 (442)
+++.|| +.||||++|. +.|++++++++++.+...... .+.+.+|+.+++++++++++++. ++.++++++.
T Consensus 256 ~~~~pD-----i~t~gK~l~~G~pigav~~~~~i~~~~~~~~~~--~T~~gnpl~~aaa~a~l~~l~~~-~~~~~~~~~g 327 (421)
T PRK09792 256 YADKPD-----LMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLG--GTYAGNPLAVAAAHAVLNIIDKE-SLCERANQLG 327 (421)
T ss_pred cCCCCc-----EEEeehhhcCCCceEEEEEcHHHHhccCCCCcC--CCCCCCHHHHHHHHHHHHHHHhh-hHHHHHHHHH
Confidence 777765 5779999963 348899999999887544333 33456899999999999999765 4788888889
Q ss_pred HHHHHhhccCC-Ccee-ec-CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEE
Q 013461 337 AILRTGLSDIH-GLSI-AS-NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 413 (442)
Q Consensus 337 ~~l~~~L~~~~-g~~~-~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~ 413 (442)
+++++.|+.+. .++. .. ...+.++++.+.++.. ..++.....++...+++ +||++.+... .++.||+.
T Consensus 328 ~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~-~~~~~~~~~~l~~~~~~-~Gv~i~~~g~-------~~~~irl~ 398 (421)
T PRK09792 328 QRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT-GEPSAAIAQKIQQRALA-QGLLLLTCGA-------YGNVIRFL 398 (421)
T ss_pred HHHHHHHHHHHHhCCCcceecccceEEEEEecCCcc-CCcchHHHHHHHHHHHH-CCcEEeecCC-------CCCEEEEe
Confidence 99988886541 1221 11 2237788888854311 11122345677777665 5999853211 02459999
Q ss_pred ecCCCCHHHHHHHHHHHHHHHH
Q 013461 414 VSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 414 ~~~~~t~eei~~~i~~l~~~~~ 435 (442)
++..+|++|++++++++.+++.
T Consensus 399 P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 399 YPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCCcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999998864
No 94
>PRK06148 hypothetical protein; Provisional
Probab=99.94 E-value=7.5e-25 Score=239.40 Aligned_cols=325 Identities=16% Similarity=0.171 Sum_probs=226.9
Q ss_pred cCCCeeecCCCCeEE-ECCeeEEEeecCCCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 91 CEPPVLESAAGPHTI-ISGKEVVNFASANYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 91 ~~~~~~~~~~g~~~~-~~G~~~id~~s~~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
..|.++++++|.|+| +||++||||.++ ...++ +||+|.+|+.+++.+....+ + ...+...++.++|++.++
T Consensus 605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g-~~~lGH~hp~v~~Ai~~q~~~l~~~~---~---~~~~~~~~lAe~L~~~~p 677 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNRGRAYLDCFNN-VCHVGHAHPRVVAAAARQAARLNTNT---R---YLHDAIVAYAERLTATLP 677 (1013)
T ss_pred CCCceEEEeeecEEEECCCCEEEEcccC-hhhcCCCCHHHHHHHHHHHhhcCCcC---C---cCCHHHHHHHHHHHHhCC
Confidence 457889999999999 599999999765 24455 48999999999999853221 1 136778899999999886
Q ss_pred --CCcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhcCCe------------E--------EEecCC
Q 013461 169 --TPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRST------------V--------VYFKHN 223 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~------------v--------~~~~~~ 223 (442)
.+.+.+++||++|++.|++ +++++.++|.++..+|+.+..++.+++.. + +..+.+
T Consensus 678 ~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 757 (1013)
T PRK06148 678 DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPER 757 (1013)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCC
Confidence 3678999999999999996 45678889999999999877666544311 1 112222
Q ss_pred --CH-------HHHHHHHHhhc---ccccc---------------------------------------cccccccccCC
Q 013461 224 --DM-------DSLRNTLERVT---ADNKR---------------------------------------SNSFGVLGRSG 252 (442)
Q Consensus 224 --d~-------~~Le~~l~~~~---~~~~~---------------------------------------a~~~g~~G~~g 252 (442)
+. +++++.++... ..... ..|||++|..
T Consensus 758 ~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~- 836 (1013)
T PRK06148 758 WPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSH- 836 (1013)
T ss_pred CChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCc-
Confidence 21 34666554321 11000 4455554431
Q ss_pred CccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHH
Q 013461 253 RGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLIT 330 (442)
Q Consensus 253 ~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~ 330 (442)
.+..+++|+.|| +.||+|++|. +-|.+++++++++.+.... .+..+.+.+|+.|++++++|++++++ ++.+
T Consensus 837 ~~a~e~~gv~PD-----ivt~gK~lggG~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~aaa~a~L~~i~~e-~l~~ 909 (1013)
T PRK06148 837 WWAFETQGVVPD-----IVTMGKPIGNGHPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSCAIGLAVLDIIEDE-DLQR 909 (1013)
T ss_pred chhhhhcCCCcc-----eeeecccccCCcceEEEEEcHHHHhhccCCC-ccccCCCCCHHHHHHHHHHHHHHhhc-cHHH
Confidence 245688999885 4569999973 2367889999999875432 23344456999999999999999765 5899
Q ss_pred HHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCC
Q 013461 331 KLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 407 (442)
Q Consensus 331 ~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~ 407 (442)
++++++++|++.|+++. ..++.. ...+.++.+.+..+..+..++......+.+.+++ +||++.+.... .
T Consensus 910 ~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g~~-------~ 981 (1013)
T PRK06148 910 NALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTEGPH-------D 981 (1013)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEeccCCC-------C
Confidence 99999999999997651 122111 2346677787754322222233345667776554 69999764221 2
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 408 VGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 408 ~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
..|||.++..+|++|+|+++++|++++.++.
T Consensus 982 ~vlr~~Ppl~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 982 NVLKIRPPLIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred CEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 4499999999999999999999999998753
No 95
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.94 E-value=1.7e-24 Score=217.26 Aligned_cols=322 Identities=16% Similarity=0.224 Sum_probs=216.0
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| +||++||||.++ ...+++ +||+|.+|+++++++...... .....+...++.++|++..+
T Consensus 15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p 90 (420)
T TIGR00700 15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF----MVTPYEGYVALAEKLNRIAP 90 (420)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc----cccCChHHHHHHHHHHHhCC
Confidence 46788999999999 599999999554 344444 489999999999998542211 11235667889999999875
Q ss_pred ---CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC-------------eEEEecCC------
Q 013461 169 ---TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS-------------TVVYFKHN------ 223 (442)
Q Consensus 169 ---~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~-------------~v~~~~~~------ 223 (442)
.+++++++||++|++.|++. +.++..+|.+...+|+.+..++.+++. .+..++..
T Consensus 91 ~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (420)
T TIGR00700 91 GSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDG 170 (420)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccc
Confidence 36889999999999999963 467778899999999988777765432 11112211
Q ss_pred ----------CHHHHHHHHHh--hcccccc----------------------------cccccc--------cccCCC-c
Q 013461 224 ----------DMDSLRNTLER--VTADNKR----------------------------SNSFGV--------LGRSGR-G 254 (442)
Q Consensus 224 ----------d~~~Le~~l~~--~~~~~~~----------------------------a~~~g~--------~G~~g~-g 254 (442)
+++.+++++.. ..+.... .|++-+ +|++|. +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~ 250 (420)
T TIGR00700 171 LLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMF 250 (420)
T ss_pred ccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhH
Confidence 13456665531 1111100 122111 133342 2
Q ss_pred cccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHH
Q 013461 255 LTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKL 332 (442)
Q Consensus 255 ~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l 332 (442)
..+++++.|| +.||||+++. +.|++++++++++.+.......+| +.+|+.+++++++++.+++. .+.+++
T Consensus 251 a~~~~~~~pD-----i~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~--~~~pl~~aaa~a~l~~l~~~-~~~~~~ 322 (420)
T TIGR00700 251 ACEHEGPEPD-----LITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTY--AGNPLACAAALAVLAIIESE-GLIERA 322 (420)
T ss_pred HHhhcCCCCC-----EEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCC--CcCHHHHHHHHHHHHHHHhc-cHHHHH
Confidence 3456777764 4569999972 238899999999887543333333 45899999999999988764 377888
Q ss_pred HHHHHHHHHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 333 KKNTAILRTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 333 ~~~~~~l~~~L~~~----~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
++.++++++.|+++ +.+... .+.+.++++.+.++.. ..++.....++.+.++ ++||++.++..+ .+
T Consensus 323 ~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i~~~~~~~-~~~~~~~~~~l~~~~~-~~Gv~i~p~~~f-------~~ 392 (420)
T TIGR00700 323 RQIGRLVTDRLTTLKAVDPRIGDV-RGLGAMIAVELVDPGT-TEPDAGLAERIATAAH-AAGLLLLTCGMF-------GN 392 (420)
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEe-eccceEEEEEEecCCC-CCccHHHHHHHHHHHH-HCCeEEeccCCC-------CC
Confidence 88888888888654 222222 2357788887743211 1122334556776544 569999876432 14
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.+|++++..+|++++++++++|++++.
T Consensus 393 ~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 393 IIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 599999988999999999999998864
No 96
>PRK07046 aminotransferase; Validated
Probab=99.94 E-value=3.5e-24 Score=215.65 Aligned_cols=341 Identities=13% Similarity=0.136 Sum_probs=225.5
Q ss_pred HHHHHHHhhhcCCCC-CcccccccccCCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCC
Q 013461 67 KEIDELCDEWVPESL-IPPIIEEMRCEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVG 142 (442)
Q Consensus 67 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~ 142 (442)
+++.+...+.-|-.. ...........|.++++++|.|+| +||++||||.++ ....++ +||+|.+|+++++++ +..
T Consensus 31 ~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~-~~~ 109 (453)
T PRK07046 31 RALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARR-GLT 109 (453)
T ss_pred HHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHh-CCC
Confidence 345555555555533 111111111346788999999999 599999999543 455555 589999999999987 322
Q ss_pred CCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHh--c----
Q 013461 143 SCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYL--S---- 213 (442)
Q Consensus 143 ~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l--~---- 213 (442)
. ....+...++.++|++.++.+++.+++||++|++.|++ ++++|..+|.+...+|+..-..+.. .
T Consensus 110 ~------~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~ 183 (453)
T PRK07046 110 T------MLPSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPV 183 (453)
T ss_pred C------CCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCC
Confidence 1 12457788999999999888999999999999999996 4568878888999999863222110 1
Q ss_pred ------C------CeEEEecCCCHHHHHHHHHhhcccccc--------------------------------------cc
Q 013461 214 ------R------STVVYFKHNDMDSLRNTLERVTADNKR--------------------------------------SN 243 (442)
Q Consensus 214 ------g------~~v~~~~~~d~~~Le~~l~~~~~~~~~--------------------------------------a~ 243 (442)
+ ..+..+++||++++++++.. .+... .+
T Consensus 184 ~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~--~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~ 261 (453)
T PRK07046 184 QRPGLLGQVHDLTATTRVVEFNDLAALEAALAD--GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETH 261 (453)
T ss_pred CCCCCCCCCccccCceEeeCCCCHHHHHHHhCC--CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence 1 13466788999999998842 11100 11
Q ss_pred cccccccCCCccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhC------C-ceeccCCCcHHHHHH
Q 013461 244 SFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSS------S-GYVFSASLPPYLASA 314 (442)
Q Consensus 244 ~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~------~-~~~~s~s~~p~~aaa 314 (442)
.|+ +|. .|..+++|+.|| |+ +|+|++|. +.|.+++++++++.+.... . .+..+.+.+|+.+++
T Consensus 262 tfr-~g~--Gg~~~~~gv~PD---i~--t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa 333 (453)
T PRK07046 262 TIS-SGP--GGYTRAHGLEPD---FL--VVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAA 333 (453)
T ss_pred cCc-cCC--cchhHHhCCCcc---ce--eehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHH
Confidence 111 221 134577899884 54 59999972 3467889999999876321 1 122233568999999
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccC---CCceeecCCCCCEEEEEecCCC-CCc-----hhhHHHHHHHHHHH
Q 013461 315 AITAIDVLEENPDLITKLKKNTAILRTGLSDI---HGLSIASNPESPIVFLILEKST-GSM-----KNDLQLLEDIADWA 385 (442)
Q Consensus 315 a~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~---~g~~~~~~~~~~i~~~~~~~~~-~~~-----~~~~~~~~~i~~~~ 385 (442)
++++|+++++. +..++++++.++|++.|+++ .++.......+.++.+.+.... .+. ..+......+...+
T Consensus 334 ~~a~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (453)
T PRK07046 334 MRATLAEVMTE-AAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYL 412 (453)
T ss_pred HHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH
Confidence 99999999764 47899999999999998753 1322211123446666653211 110 00222344566655
Q ss_pred HHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 386 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 386 L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
++ +||++.+.. ..++++++ +|++||++++++++++++++.
T Consensus 413 ~~-~Gv~~~~~~----------~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 413 LN-RGVLITPFH----------NMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred HH-CCCEEeccc----------CcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 55 599987531 12788775 899999999999999988764
No 97
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.94 E-value=1.9e-24 Score=217.76 Aligned_cols=341 Identities=18% Similarity=0.246 Sum_probs=222.4
Q ss_pred HHHHHhhhcCCCCCcccccc--cccCCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCC
Q 013461 69 IDELCDEWVPESLIPPIIEE--MRCEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGS 143 (442)
Q Consensus 69 ~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~ 143 (442)
.-+...++.|-.....+... ....|.++++++|.++| .||++||||.++ ....++ +||+|++++++++++. ..+
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~ 83 (423)
T TIGR00713 5 LFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG-TSY 83 (423)
T ss_pred HHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhC-CcC
Confidence 33444555565543322211 11246789999999999 599999999665 333344 4899999999999873 211
Q ss_pred CccCccccCcHHHHHHHHHHHhhhC-CCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhc------
Q 013461 144 CGPRGFYGTIDVHLDCEARIAKFLG-TPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLS------ 213 (442)
Q Consensus 144 ~~~~~~~g~~~~~~~le~~lA~~~g-~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~------ 213 (442)
+...+...+|+++|+++++ .++++++++|++|++.|++. +.++..+|..+..+|+.......++
T Consensus 84 ------~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~ 157 (423)
T TIGR00713 84 ------GAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAAT 157 (423)
T ss_pred ------CCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccc
Confidence 1245677899999999886 46889999999999999874 4577777788888888543322211
Q ss_pred -------------CCeEEEecCCCHHHHHHHHHhhcccccc----------------------------cccc-------
Q 013461 214 -------------RSTVVYFKHNDMDSLRNTLERVTADNKR----------------------------SNSF------- 245 (442)
Q Consensus 214 -------------g~~v~~~~~~d~~~Le~~l~~~~~~~~~----------------------------a~~~------- 245 (442)
...++.++++|++++++.++....+.+. .|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv 237 (423)
T TIGR00713 158 LGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEV 237 (423)
T ss_pred cCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 1134667889999999988743211110 1111
Q ss_pred --c-ccccCCCccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceec-cCCCcHHHHHHHHHHH
Q 013461 246 --G-VLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVF-SASLPPYLASAAITAI 319 (442)
Q Consensus 246 --g-~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~-s~s~~p~~aaaa~aal 319 (442)
| ++|. .+..+++++.|| + .||||++|. ++|++++++++++.+......+.+ +.+.+|+.++++.++|
T Consensus 238 ~~g~r~g~--~~~~~~~~~~pD---i--~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l 310 (423)
T TIGR00713 238 MTGFRVAL--GGAQEYFGVEPD---L--TTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATL 310 (423)
T ss_pred ccccccCc--chhHHHhCCCcc---h--hhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHH
Confidence 1 1221 344567788764 3 479999973 359999999999988643222222 3357899999999999
Q ss_pred HHHhcChHHHHHHHHHHHHHHHhhccC---CCceeecCCCCCEEEEEecCCCCC-----chhhHHHHHHHHHHHHHhCCE
Q 013461 320 DVLEENPDLITKLKKNTAILRTGLSDI---HGLSIASNPESPIVFLILEKSTGS-----MKNDLQLLEDIADWALKEDGV 391 (442)
Q Consensus 320 ~~l~~~~~~~~~l~~~~~~l~~~L~~~---~g~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~i~~~~L~~~GV 391 (442)
+.+++.. +.++++++.+++++.|.++ .++.......+.++.+.+..+... ...+.....++++.+++ +||
T Consensus 311 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv 388 (423)
T TIGR00713 311 KLLDEEG-VYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGV 388 (423)
T ss_pred HHHhccc-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCe
Confidence 9887643 6777777777777766432 144332123567777776532110 00122234467776665 699
Q ss_pred EEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 392 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 392 ~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
++.+..+ +.+|++++ +|++||++++++|++++++
T Consensus 389 ~v~~~~~---------~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 389 FLPPSQF---------EACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred EEecCCc---------cceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 9875432 23788776 7999999999999988765
No 98
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.94 E-value=8.9e-25 Score=219.09 Aligned_cols=312 Identities=16% Similarity=0.162 Sum_probs=218.5
Q ss_pred CCeeecCCCCeEE-ECCeeEEEeecCC---CCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 93 PPVLESAAGPHTI-ISGKEVVNFASAN---YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 93 ~~~~~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
++.+++++|.++| +||++||||.++. ++|. +||+|.+++.+++++++....+ .-+.+...++.++|++.++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~ 102 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGY-NHPRLNAAAQKQIDKMSHVMFG----GFTHKPAIELCQKLVKMTP 102 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCC-CCHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHhhCC
Confidence 4568899999999 5999999997753 6674 5899999999999986543211 1135667889999999885
Q ss_pred C--CcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe---------------EEEe--
Q 013461 169 T--PDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST---------------VVYF-- 220 (442)
Q Consensus 169 ~--e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~---------------v~~~-- 220 (442)
. +++.++++|++|++.+++... ++.++|.+...+|+.+...+.+++.. ...+
T Consensus 103 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~ 182 (427)
T TIGR00508 103 NALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ 182 (427)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC
Confidence 3 688999999999999997432 35568899999999877666554421 0111
Q ss_pred -------cCCCHHHHHHHHHhhcccccc---------------------------------------cccccccccCCCc
Q 013461 221 -------KHNDMDSLRNTLERVTADNKR---------------------------------------SNSFGVLGRSGRG 254 (442)
Q Consensus 221 -------~~~d~~~Le~~l~~~~~~~~~---------------------------------------a~~~g~~G~~g~g 254 (442)
.++|+++++++++........ .| .| +|++|.+
T Consensus 183 ~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG-~Gr~G~~ 260 (427)
T TIGR00508 183 NRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TG-FGRTGKL 260 (427)
T ss_pred ccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-CCcCCcc
Confidence 122566777777643211100 33 34 4677766
Q ss_pred -cccccCCCCCceeEEEEeccccccC---CCcEEEcCHHhHHHHHhhC-Ccee--ccCCCcHHHHHHHHHHHHHHhcChH
Q 013461 255 -LTEHCGVPVDKIDIVTAAMGHALAT---EGGFCTGSARVVDHQRLSS-SGYV--FSASLPPYLASAAITAIDVLEENPD 327 (442)
Q Consensus 255 -~~~~~~v~~~~~diii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~-~~~~--~s~s~~p~~aaaa~aal~~l~~~~~ 327 (442)
..+++++.| ||+ +++|+++. +.+.+++++++++.++... ..+. .+...+|+.+++++++|+++++.+
T Consensus 261 ~~~~~~~v~p---Di~--~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~- 334 (427)
T TIGR00508 261 FACEHAGVVP---DIL--CVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGE- 334 (427)
T ss_pred chhhhcCCCC---CEE--EechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCC-
Confidence 467889876 455 48999951 1244778889999886432 1121 223458999999999999997654
Q ss_pred HHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC
Q 013461 328 LITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 405 (442)
Q Consensus 328 ~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~ 405 (442)
+.++++++.++|++.|+++....... ...++++.+.+..+. ....+.++++ ++||++.+..
T Consensus 335 ~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~--------~~~~~~~~l~-~~Gv~~~~~~-------- 397 (427)
T TIGR00508 335 WQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV--------NVEELQKKFV-EQGVWIRPFG-------- 397 (427)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc--------CHHHHHHHHH-HCCeEEEecC--------
Confidence 68999999999999998762111111 235788888885321 1235777655 5699997642
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 406 LPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 406 ~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..+|++++..+|++|||++++++++++++
T Consensus 398 --~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 398 --KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred --CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 23999999999999999999999998754
No 99
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=9e-25 Score=220.53 Aligned_cols=308 Identities=18% Similarity=0.180 Sum_probs=222.7
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHH-HhcCCCCCccCccccCcHHHHHHHH----HHHhhhCC-CcEEEE----cc
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCEA----RIAKFLGT-PDSILY----SY 177 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l-~~~g~~~~~~~~~~g~~~~~~~le~----~lA~~~g~-e~~i~~----~s 177 (442)
++.|++ +|.||. +|.+++++...+ .+|+.|+.|.|...|+. .+.++|+ +.++.++. +..+.+ +|
T Consensus 34 ~~~l~liasen~~----s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~S 108 (475)
T PLN03226 34 WKGLELIASENFT----SRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPLS 108 (475)
T ss_pred HcCeeEecCCccC----CHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcCc
Confidence 356887 888884 689999999999 78999999999777765 8888887 34444554 455545 89
Q ss_pred hHHHHHhhhhhhccCCCEEEeCC------CchHHHHHHHHhcCCeEE----EecCC------CHHHHHHHHHhhcccccc
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADE------GVHWGIQNGLYLSRSTVV----YFKHN------DMDSLRNTLERVTADNKR 241 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~------~~h~s~~~~~~l~g~~v~----~~~~~------d~~~Le~~l~~~~~~~~~ 241 (442)
|+.||.+++.++++|||.|+.++ ..|.+...+.++++.... .|+|| |+++|++++++..++...
T Consensus 109 G~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv 188 (475)
T PLN03226 109 GSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLII 188 (475)
T ss_pred hHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEE
Confidence 99999999999999999999855 567777777777766544 67787 999999998754332111
Q ss_pred ------------------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHHh
Q 013461 242 ------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARV 290 (442)
Q Consensus 242 ------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~~ 290 (442)
+|++|+++..+.+ . +.+.+|++++|++|+| |..||+++++++.
T Consensus 189 ~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--~----p~~~~Div~~t~hK~L~GP~Gg~I~~~~~~ 262 (475)
T PLN03226 189 AGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA--S----PFEYCDVVTTTTHKSLRGPRGGMIFFRKGP 262 (475)
T ss_pred EecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC--C----CCCCCeEEEecCcccccCCCceEEEEchhh
Confidence 6666666543321 1 1246899999999999 7889999988765
Q ss_pred H-----------HH--HHhhCCceeccCCCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecC-
Q 013461 291 V-----------DH--QRLSSSGYVFSASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN- 354 (442)
Q Consensus 291 i-----------~~--l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~- 354 (442)
+ ++ .........+++++++..+++..++++.+... +.+++++.++.++|.+.|.+. |+++.+.
T Consensus 263 ~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~ 341 (475)
T PLN03226 263 KPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGG 341 (475)
T ss_pred cccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCC
Confidence 4 33 22333334567777777777777889988643 457899999999999999985 9988753
Q ss_pred CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEE----EecCCCCHHHHHHHHHHH
Q 013461 355 PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL----FVSAAHSEADLVKACESL 430 (442)
Q Consensus 355 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi----~~~~~~t~eei~~~i~~l 430 (442)
.+++++.+.+... +. + ..++. +.|++.||.+....-|.....-.|++||+ ..+..++++|++++++.|
T Consensus 342 t~~hi~lv~~~~~-gi---~---~~~~~-~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i 413 (475)
T PLN03226 342 TDNHLVLWDLRPL-GL---T---GSRVE-KVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFL 413 (475)
T ss_pred CCCCEEEEEccCC-CC---C---HHHHH-HHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHH
Confidence 3467777776321 10 1 11333 46778899998765332211223677998 677789999999999999
Q ss_pred HHHHHH
Q 013461 431 KRISAV 436 (442)
Q Consensus 431 ~~~~~~ 436 (442)
.++++.
T Consensus 414 ~~~~~~ 419 (475)
T PLN03226 414 HRAVTI 419 (475)
T ss_pred HHHHHH
Confidence 998874
No 100
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.94 E-value=5.1e-24 Score=214.99 Aligned_cols=325 Identities=15% Similarity=0.172 Sum_probs=213.8
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| .||++||||.++ ....++ +||+|.+++.+++.+. ..... . .-+.+...++.++|++.++
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~-~~~~~-~--~~~~~~~~~lAe~L~~~~p 115 (459)
T PRK06931 40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSG-LPLHT-L--DLTTPLKDAFSEYLLSLLP 115 (459)
T ss_pred CCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhh-ccccc-c--ccCCHHHHHHHHHHHHhCC
Confidence 36788999999999 599999999654 444455 5899999999999862 11111 1 1245778899999999876
Q ss_pred CC----cEEEE-cchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCC----
Q 013461 169 TP----DSILY-SYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHND---- 224 (442)
Q Consensus 169 ~e----~~i~~-~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d---- 224 (442)
.. ..+++ +||++|++.|++. +.+|..+|.+...+|+.+..++.+++. .+..++.++
T Consensus 116 ~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (459)
T PRK06931 116 GQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRC 195 (459)
T ss_pred CccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccc
Confidence 32 34455 7999999999964 467888899999999998877765432 122222221
Q ss_pred ---------HHHH----HHHHHhhc---ccccc---------------------------------------cccccccc
Q 013461 225 ---------MDSL----RNTLERVT---ADNKR---------------------------------------SNSFGVLG 249 (442)
Q Consensus 225 ---------~~~L----e~~l~~~~---~~~~~---------------------------------------a~~~g~~G 249 (442)
.+.+ ++.++... +.... ..+||++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG 275 (459)
T PRK06931 196 PLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG 275 (459)
T ss_pred cccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc
Confidence 2333 33332210 00000 34444443
Q ss_pred cCCCccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChH
Q 013461 250 RSGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPD 327 (442)
Q Consensus 250 ~~g~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~ 327 (442)
+ .+..+++|+.|| +.+++|++|. +-|.++++++ ++.+....+.. +.+.+|+.|++++++|+++++. +
T Consensus 276 ~--~~a~~~~gv~PD-----ivt~gK~l~gG~Pi~av~~~~~-~~~~~~~~~~~--T~~gnpla~aaala~L~~l~~~-~ 344 (459)
T PRK06931 276 K--MFAFEHAGIEPD-----IIVMSKAVGGGLPLAVLGIKKE-FDAWQPGGHTG--TFRGNQLAMATGLTTLKILKEE-N 344 (459)
T ss_pred h--HHHhhhcCCCCC-----EEEecccccCCcceeeeeeHHH-HhhccCCCCCC--CCCCCHHHHHHHHHHHHHHHhC-C
Confidence 2 245678999985 4559999973 1245666665 45553222222 3346899999999999999765 4
Q ss_pred HHHHHHHHHHHHHHhhccCC-Cceeec--CCCCCEEEEEecCCCCC------chhhHHHHHHHHHHHHHhCCEEEeeccC
Q 013461 328 LITKLKKNTAILRTGLSDIH-GLSIAS--NPESPIVFLILEKSTGS------MKNDLQLLEDIADWALKEDGVFVVTSKR 398 (442)
Q Consensus 328 ~~~~l~~~~~~l~~~L~~~~-g~~~~~--~~~~~i~~~~~~~~~~~------~~~~~~~~~~i~~~~L~~~GV~v~~~~~ 398 (442)
+.+++++++++|++.|+++. ..++.. ...+.++.+.+..+... ...+.....++...++ ++||++.+...
T Consensus 345 l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~ 423 (459)
T PRK06931 345 LAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGGR 423 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecCC
Confidence 88999999999999997651 122111 23566777877432111 1112233456777655 46999875421
Q ss_pred cccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 399 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 399 ~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
. ++.+|+.++..+|++|+++++++++++++++.+
T Consensus 424 ~-------~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 424 N-------GNVVRLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred C-------CCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 1 234999999999999999999999999988754
No 101
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=1.3e-24 Score=217.14 Aligned_cols=315 Identities=16% Similarity=0.172 Sum_probs=213.8
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.|+| .||++||||.++ ...+++ +||+|.+|+.++++++..... ..-+.+...+|.++|++..+
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~p 97 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMF----GGLTHEPAIKLTRKLLNLTD 97 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCccc----CCcCCHHHHHHHHHHHhhCC
Confidence 46789999999999 599999999654 334444 489999999999998643221 11245777899999999875
Q ss_pred --CCcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCCe-------------EEEecCC-
Q 013461 169 --TPDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRST-------------VVYFKHN- 223 (442)
Q Consensus 169 --~e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~~-------------v~~~~~~- 223 (442)
.+++.+++||++|++.|++... +|..+|.+...+|+.+..++.+++.. ...++..
T Consensus 98 ~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~ 177 (422)
T PRK05630 98 NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP 177 (422)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc
Confidence 5789999999999999997432 34467889999999887777665421 1112211
Q ss_pred ----CHH-------HHHHHHHhh----------cccc----cc------------ccc---------ccccccCCCcc-c
Q 013461 224 ----DMD-------SLRNTLERV----------TADN----KR------------SNS---------FGVLGRSGRGL-T 256 (442)
Q Consensus 224 ----d~~-------~Le~~l~~~----------~~~~----~~------------a~~---------~g~~G~~g~g~-~ 256 (442)
+.+ .+++++... .... .. .|+ .|+ |++|.+. .
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~-GrtG~~~a~ 256 (422)
T PRK05630 178 VRGSSPQEISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGF-GRTGELFAT 256 (422)
T ss_pred ccCCChHHHHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCC-CcCchhhHH
Confidence 122 233332210 0000 00 111 222 5566554 4
Q ss_pred cccCCCCCceeEEEEecccccc---CCCcEEEcCHHhHHHHHhhC--C--ceeccCCCcHHHHHHHHHHHHHHhcChHHH
Q 013461 257 EHCGVPVDKIDIVTAAMGHALA---TEGGFCTGSARVVDHQRLSS--S--GYVFSASLPPYLASAAITAIDVLEENPDLI 329 (442)
Q Consensus 257 ~~~~v~~~~~diii~S~sK~lg---~~GG~v~g~~~~i~~l~~~~--~--~~~~s~s~~p~~aaaa~aal~~l~~~~~~~ 329 (442)
+++|+.|| |+ +|+|++| .++|++++++++++.+.... . .+..+.+.+|+.|+++.++|+++++. +.+
T Consensus 257 ~~~gv~PD---i~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~-~~~ 330 (422)
T PRK05630 257 LAAGVTPD---IM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG-MWR 330 (422)
T ss_pred HhcCCCCC---ee--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC-cHH
Confidence 78899884 54 7999994 35788899999999875321 1 11223356999999999999999875 478
Q ss_pred HHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCC
Q 013461 330 TKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 407 (442)
Q Consensus 330 ~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~ 407 (442)
++++++.++|++.|+++...+..+ ...+.++.+.+..+. + ..++.+.++ ++|+++.+..
T Consensus 331 ~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~-----~---~~~~~~~~~-~~Gl~~~~~g---------- 391 (422)
T PRK05630 331 KQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV-----D---MEEATQAAV-DHGVWLRPFG---------- 391 (422)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc-----c---HHHHHHHHH-HCCeEEEecC----------
Confidence 899999999999887542221111 135778888885321 1 235666655 4699987632
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 408 VGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 408 ~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..+|+.++..+|++|+|+++++|++++.+
T Consensus 392 ~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 392 RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 23999999999999999999999998753
No 102
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.93 E-value=3.8e-24 Score=215.22 Aligned_cols=311 Identities=17% Similarity=0.177 Sum_probs=207.3
Q ss_pred CeeecCCCCeEEE--CCeeEEEeecC-CCCCCC-CChHHHH--HHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh
Q 013461 94 PVLESAAGPHTII--SGKEVVNFASA-NYLGLI-GHEKLLE--SCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167 (442)
Q Consensus 94 ~~~~~~~g~~~~~--~G~~~id~~s~-~~l~~~-~~p~v~e--a~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~ 167 (442)
.++++++|.|+|. ||++||||.++ ....++ +||+|.+ ++.+++.+.......+ ..-..+...++.++|+++.
T Consensus 28 ~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~--~~~~~~~~~~la~~l~~~~ 105 (443)
T PRK08297 28 LDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSN--SDVYTVEMARFVDTFARVL 105 (443)
T ss_pred eEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhcccc--CCcCCHHHHHHHHHHHhhc
Confidence 3478999999994 89999999654 334444 4899999 9999998743211111 1123567788999999887
Q ss_pred C---CCcEEEEcchHHHHHhhhhhhc----------c-----CCCEEEeCCCchHHHHHHHHhcCCeE------------
Q 013461 168 G---TPDSILYSYGLSTMFSAIPCFC----------K-----KGDLIVADEGVHWGIQNGLYLSRSTV------------ 217 (442)
Q Consensus 168 g---~e~~i~~~sG~~a~~~ai~a~~----------~-----~gd~Vi~~~~~h~s~~~~~~l~g~~v------------ 217 (442)
+ .+++.+++||++|++.|++... + +..+|.+...+|+.+..++.+++...
T Consensus 106 ~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK08297 106 GDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWP 185 (443)
T ss_pred CCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCcc
Confidence 2 4689999999999999997541 2 24578889999999888777765211
Q ss_pred ------EEecC-------------CCHHHHHHHHHhhcccccc-------------------------------------
Q 013461 218 ------VYFKH-------------NDMDSLRNTLERVTADNKR------------------------------------- 241 (442)
Q Consensus 218 ------~~~~~-------------~d~~~Le~~l~~~~~~~~~------------------------------------- 241 (442)
..++. ++.+++++++.....+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~D 265 (443)
T PRK08297 186 RIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFD 265 (443)
T ss_pred ccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 01110 0123445555532221110
Q ss_pred --cccccccccCCCc-cccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHh--hCCc-eeccCCCcHHHHHHH
Q 013461 242 --SNSFGVLGRSGRG-LTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRL--SSSG-YVFSASLPPYLASAA 315 (442)
Q Consensus 242 --a~~~g~~G~~g~g-~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~--~~~~-~~~s~s~~p~~aaaa 315 (442)
..++ |++|.+ ..+++|+.|| |+ +|+|+++ .||++.+++ +.+.... .... ...+.+.+|+.++++
T Consensus 266 EV~tGf---GRtG~~~a~~~~gv~PD---iv--~~gK~l~-~~a~l~~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa 335 (443)
T PRK08297 266 EVQTGV---GLTGTAWAYQQLGVRPD---IV--AFGKKTQ-VCGIMAGRR-VDEVEDNVFAVSSRINSTWGGNLVDMVRA 335 (443)
T ss_pred chhhcc---CccchHHHHHhcCCCCC---EE--Eeccccc-ccceecchH-HHHhhhhhccCccccCCCCCccHHHHHHH
Confidence 2333 445544 4578899874 55 5999996 356666654 3322211 0111 122334689999999
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHhhccC----CCc--eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC
Q 013461 316 ITAIDVLEENPDLITKLKKNTAILRTGLSDI----HGL--SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKED 389 (442)
Q Consensus 316 ~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~----~g~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~ 389 (442)
.++|+++++. ++.++++++.+++++.|+++ +.+ .+. ..+.++.+.+.+ .....++...++ ++
T Consensus 336 ~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr--g~G~~~~i~~~~--------~~~~~~~~~~l~-~~ 403 (443)
T PRK08297 336 RRILEVIEED-GLVENAARQGEYLLARLEELAAEFPAVVSNVR--GRGLMCAFDLPT--------TADRDEVIRRLW-EE 403 (443)
T ss_pred HHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHCCCcceeee--ccceEEEEEecC--------HHHHHHHHHHHH-HC
Confidence 9999999764 58899999999999998764 212 222 357788888732 122446777655 56
Q ss_pred CEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 390 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 390 GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
||++.+... ..+|++++..+|++|+++++++|++++.++
T Consensus 404 Gvl~~~~~~---------~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 404 GVLVLPCGE---------RSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CEEEecCCC---------CeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 999876432 239999999999999999999999988754
No 103
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.93 E-value=1.4e-23 Score=205.27 Aligned_cols=303 Identities=16% Similarity=0.191 Sum_probs=207.1
Q ss_pred ccCCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhh
Q 013461 90 RCEPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 166 (442)
Q Consensus 90 ~~~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~ 166 (442)
+..+..+++++|.|+| .||++||||.++ ....++ +||+|++++++++++.... ++ .+ ..+...+++++++++
T Consensus 4 ~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~--~~-~~--~~~~~~~la~~l~~~ 78 (364)
T PRK04013 4 YRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVA--GP-MF--EHEEKEEMLEELSKW 78 (364)
T ss_pred cCCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCc--cC-Cc--CCHHHHHHHHHHHhh
Confidence 3456788999999999 599999999554 334444 4799999999999985322 11 11 357789999999999
Q ss_pred hCCCcEEEEcchHHHHHhhhhhh---ccCCCEEEeCCCchHHHHHHHHhcC------------CeEEEecCCCHHHHHHH
Q 013461 167 LGTPDSILYSYGLSTMFSAIPCF---CKKGDLIVADEGVHWGIQNGLYLSR------------STVVYFKHNDMDSLRNT 231 (442)
Q Consensus 167 ~g~e~~i~~~sG~~a~~~ai~a~---~~~gd~Vi~~~~~h~s~~~~~~l~g------------~~v~~~~~~d~~~Le~~ 231 (442)
.+.+.+++++||++|++.|++.. .+|..+|.++..+|+.+...+.+++ ..+..++.+|.+++++.
T Consensus 79 ~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 158 (364)
T PRK04013 79 VNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEA 158 (364)
T ss_pred cCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHH
Confidence 98889999999999999999754 3555678888899998766665432 12455677888888887
Q ss_pred HHhhcccc------------cc-------------ccc---------ccccccCCC-ccccccCCCCCceeEEEEecccc
Q 013461 232 LERVTADN------------KR-------------SNS---------FGVLGRSGR-GLTEHCGVPVDKIDIVTAAMGHA 276 (442)
Q Consensus 232 l~~~~~~~------------~~-------------a~~---------~g~~G~~g~-g~~~~~~v~~~~~diii~S~sK~ 276 (442)
+....... .. .|+ .|. ++|. +..+++++.|| +.+|+|+
T Consensus 159 i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~--RtG~~~a~~~~gv~PD-----iv~~gK~ 231 (364)
T PRK04013 159 ITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL--RTGKFLAIEHYKVEPD-----IVTMGKG 231 (364)
T ss_pred hcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC--CCCchhHHHhcCCCCC-----EEEeccc
Confidence 75211000 00 111 121 3443 34578899885 5559999
Q ss_pred ccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc-eeec
Q 013461 277 LAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL-SIAS 353 (442)
Q Consensus 277 lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~-~~~~ 353 (442)
+|. +.|.++.+.++. .. .+..+.+.+|+.|+++.++|+++++++ +.++.++. +. .+.. +.+ ++.
T Consensus 232 lggG~P~~a~~~~~~~~----~~--~~~~T~~gnp~~~aaa~a~l~~i~~~~-l~~~~~~~---l~-~l~~-~~v~~vR- 298 (364)
T PRK04013 232 IGNGVPVSLTLTNFDVE----RG--KHGSTFGGNPLACKAVAVTLRILRRER-LVEKAGEK---FI-EIKG-ERVVTTR- 298 (364)
T ss_pred ccCCceeEEEEeccccc----CC--CcCCCCCcCHHHHHHHHHHHHHHHhcc-HHHHHHHH---HH-Hhcc-Ccceeee-
Confidence 973 224566666541 11 223344569999999999999998754 66766654 22 2322 211 222
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 354 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 354 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
..+.++.+.+..+ ..++.+.+++ +|+++.+... +.+|+.|+..+|++|+++++++|+++
T Consensus 299 -G~Gl~~gve~~~~----------~~~i~~~~~~-~Gll~~~~g~---------~vlr~~Ppl~it~~~i~~~~~~l~~~ 357 (364)
T PRK04013 299 -GRGLMIGIVLKKP----------VGKYVEELQN-RGYLVHTAGQ---------RVIRLLPPLIISKDTMEEAKSAIEGV 357 (364)
T ss_pred -eCcEEEEEEeCCc----------HHHHHHHHHh-CCcEEeeCCC---------CEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 2466777777321 2356776554 6999875421 34999999999999999999999999
Q ss_pred HHHHh
Q 013461 434 SAVVL 438 (442)
Q Consensus 434 ~~~~~ 438 (442)
+.+++
T Consensus 358 l~~~~ 362 (364)
T PRK04013 358 INDIL 362 (364)
T ss_pred HHHHh
Confidence 98875
No 104
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.93 E-value=3.6e-23 Score=208.15 Aligned_cols=325 Identities=18% Similarity=0.224 Sum_probs=216.5
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|.++++++|.++| +||++||||.++ ...+++ +||++.+++.+++++++.... ... ..+...++.+.+++..+
T Consensus 23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~---~~~-~~~~~~~la~~l~~~~~ 98 (425)
T PRK08088 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF---QVL-AYEPYLELCEKMNQKVP 98 (425)
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccc---ccc-CCHHHHHHHHHHHHhCC
Confidence 36788999999999 699999999654 333344 489999999999998653211 111 23455689999998876
Q ss_pred C---CcEEEEcchHHHHHhhhh---hhccCCCEEEeCCCchHHHHHHHHhcCCeE---------------EEec--CCC-
Q 013461 169 T---PDSILYSYGLSTMFSAIP---CFCKKGDLIVADEGVHWGIQNGLYLSRSTV---------------VYFK--HND- 224 (442)
Q Consensus 169 ~---e~~i~~~sG~~a~~~ai~---a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v---------------~~~~--~~d- 224 (442)
. +++++.+||++|++.+++ ++.+++++|.+...+|+.+..+..+++... ..++ .++
T Consensus 99 ~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 178 (425)
T PRK08088 99 GDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGV 178 (425)
T ss_pred CCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCc
Confidence 3 588999999999988885 456889999999999998877766543210 1111 121
Q ss_pred -----HHHHHHHHHhh--cccccc----------------------------cccccc--------cccCCCcc-ccccC
Q 013461 225 -----MDSLRNTLERV--TADNKR----------------------------SNSFGV--------LGRSGRGL-TEHCG 260 (442)
Q Consensus 225 -----~~~Le~~l~~~--~~~~~~----------------------------a~~~g~--------~G~~g~g~-~~~~~ 260 (442)
+++|+++++.. .+.... .|++-+ +|.+|.+. .++++
T Consensus 179 ~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~ 258 (425)
T PRK08088 179 SEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMG 258 (425)
T ss_pred cHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcC
Confidence 44577777521 111000 111111 23344332 34556
Q ss_pred CCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 013461 261 VPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAI 338 (442)
Q Consensus 261 v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~ 338 (442)
+.|+ ++||||+++. +.||+++++++++.+...... .+.+.+|+.++++.+.|+.++.. +..+++++..++
T Consensus 259 ~~pd-----i~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~ 330 (425)
T PRK08088 259 VAAD-----LTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLG--GTYAGNPIACAAALAVLKVFEQE-NLLQKANALGEK 330 (425)
T ss_pred CCCC-----EEEEeccccCCCcceeeEecHHHHhhcCCCCCC--CCCCcCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 5554 6889999972 238899999999988654433 34456889999999999988654 477788888888
Q ss_pred HHHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEe
Q 013461 339 LRTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 414 (442)
Q Consensus 339 l~~~L~~~----~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~ 414 (442)
+++.|.++ +.+... ...+.++++.+..+.....++.....++...+++ +||.+.+...+ ++.+|+++
T Consensus 331 ~~~~l~~l~~~~~~~~~v-~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~-------~~~iRl~~ 401 (425)
T PRK08088 331 LKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPY-------YNVLRILV 401 (425)
T ss_pred HHHHHHHHHHhCCCeEEE-eccceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCC-------CCEEEEEC
Confidence 87777654 222112 2237788888843211111223345677877655 59887653221 35599999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 013461 415 SAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 415 ~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+..+|++||++++++|++++.+.
T Consensus 402 ~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 402 PLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCCcCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999988653
No 105
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.93 E-value=6.9e-24 Score=213.07 Aligned_cols=312 Identities=18% Similarity=0.262 Sum_probs=202.9
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG 168 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g 168 (442)
.|+++++++|.|+| .||++||||.++ ....++ +||+|.+|+.+++++.. . +....+...++.++|++.++
T Consensus 30 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~-~------~~~~~~~~~~la~~l~~~~p 102 (431)
T PRK06209 30 APGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC-N------FTRPSAIELDAAESFLELID 102 (431)
T ss_pred CCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc-C------CCCCCHHHHHHHHHHHHhCC
Confidence 35778999999999 599999999654 334444 48999999999998732 1 12234555688999999875
Q ss_pred -CCcEEEEcchHHHHHhhhhh---hccCCCEEEe-CCCchHH--HHHHH-Hhc-C------CeEEEecCCCHHHHHHHHH
Q 013461 169 -TPDSILYSYGLSTMFSAIPC---FCKKGDLIVA-DEGVHWG--IQNGL-YLS-R------STVVYFKHNDMDSLRNTLE 233 (442)
Q Consensus 169 -~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~-~~~~h~s--~~~~~-~l~-g------~~v~~~~~~d~~~Le~~l~ 233 (442)
.+++.+++||++|++.|++. +.+|..+|.+ ...+|.. ...+. ..+ + ..+..++|||+++++++++
T Consensus 103 ~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 182 (431)
T PRK06209 103 GADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALFE 182 (431)
T ss_pred ccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHHH
Confidence 57889999999999999964 4566666665 3444421 00110 011 1 1246788999999999987
Q ss_pred hhcccccc----------------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccC
Q 013461 234 RVTADNKR----------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT 279 (442)
Q Consensus 234 ~~~~~~~~----------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~ 279 (442)
........ .| .|+ +.++.|..+++++.|| +.+|+|++|.
T Consensus 183 ~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~-~~~~~g~~~~~gv~PD-----i~t~gK~lgg 255 (431)
T PRK06209 183 DHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGF-RWHMRGAQKLYGIVPD-----LSCFGKALGN 255 (431)
T ss_pred hCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccC-CcCcchhhHHhCCCcc-----eeeehhhhcC
Confidence 53221100 22 232 2234456667898874 4679999974
Q ss_pred --CCcEEEcCHHhHHH--HHh--hCCceeccCC--CcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC---CC
Q 013461 280 --EGGFCTGSARVVDH--QRL--SSSGYVFSAS--LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI---HG 348 (442)
Q Consensus 280 --~GG~v~g~~~~i~~--l~~--~~~~~~~s~s--~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~---~g 348 (442)
++|++++++++++. +.. ....+.++++ .+|+.+++++++|+++++. +++++++++.++|++.|+++ .+
T Consensus 256 G~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~-~~~~~~~~~g~~l~~~L~~~~~~~~ 334 (431)
T PRK06209 256 GFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE-DVIERLHEQGAKLAAGVNEAAAEHG 334 (431)
T ss_pred CcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 57889999999987 321 1233444443 4689999999999999875 48999999999999988653 13
Q ss_pred ce--eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHH
Q 013461 349 LS--IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKA 426 (442)
Q Consensus 349 ~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~ 426 (442)
+. +.+ .++++....+..... ..++......+.+.++ ++||++.+ +++ +..||++||+++
T Consensus 335 ~~~~vr~-~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~Gi~~p~--------------l~i--s~~ht~~dId~~ 395 (431)
T PRK06209 335 LQDHVRV-SGRPCCLTYSTLDGN-GQPSQAFRTLFLQETI-RRGVLMPS--------------LVV--SYAHGDADIERT 395 (431)
T ss_pred CCeEEEe-ecceEEEEEecCCcc-cCCcHHHHHHHHHHHH-HCCccccc--------------ccc--cccCCHHHHHHH
Confidence 22 211 123322222211100 0112222335666655 45997521 344 467899999999
Q ss_pred HHHHHHHHHHH
Q 013461 427 CESLKRISAVV 437 (442)
Q Consensus 427 i~~l~~~~~~~ 437 (442)
++++++++.++
T Consensus 396 l~~l~~~l~~~ 406 (431)
T PRK06209 396 IDAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHHH
Confidence 99999998876
No 106
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.93 E-value=2.2e-23 Score=206.79 Aligned_cols=310 Identities=16% Similarity=0.168 Sum_probs=219.3
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHH----HHHHhhhCCCcE-EEEcchHHH
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCE----ARIAKFLGTPDS-ILYSYGLST 181 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le----~~lA~~~g~e~~-i~~~sG~~a 181 (442)
++.|++ +|.||. +|.+.+++...+.+ |..|+.|.|.+ |..+...++| ++..++||.+.+ +-.-||+.|
T Consensus 49 ~~~l~LiasEN~~----s~~v~~a~~s~l~nkyaeg~pg~ryy-~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~A 123 (493)
T PRK13580 49 RSSLKLIASENYS----SLAVQLAMGNLLTDKYAEGTPGHRFY-AGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADA 123 (493)
T ss_pred hcCceEecccccC----CHHHHHHhcccccccCcCCCCCcccc-CCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHH
Confidence 356887 888884 58899998887764 87888777754 4444444443 445567898876 445689999
Q ss_pred HHhhhhhhccC-------------------------------CCEEEeCCCchHH---HHHHHHhcC--CeEEEecC---
Q 013461 182 MFSAIPCFCKK-------------------------------GDLIVADEGVHWG---IQNGLYLSR--STVVYFKH--- 222 (442)
Q Consensus 182 ~~~ai~a~~~~-------------------------------gd~Vi~~~~~h~s---~~~~~~l~g--~~v~~~~~--- 222 (442)
|..+..++++| ||.|+.-+..|+. .-.....++ -....++.
T Consensus 124 n~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~ 203 (493)
T PRK13580 124 NLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD 203 (493)
T ss_pred HHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc
Confidence 99999999876 7988765443322 111111122 22233332
Q ss_pred ---CCHHHHHHHHHhhcccccc------------------------------cccccccccCCCccccccCCCCCceeEE
Q 013461 223 ---NDMDSLRNTLERVTADNKR------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIV 269 (442)
Q Consensus 223 ---~d~~~Le~~l~~~~~~~~~------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~dii 269 (442)
.|++++++.++..++.... +|++|++| |.+..+.++.. +++|++
T Consensus 204 ~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig--g~~~~~~~~~~-~~~D~v 280 (493)
T PRK13580 204 TGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVA--GKVFTGDEDPV-PHADIV 280 (493)
T ss_pred cCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchhhceec--cccchhhcCCC-CCCcEE
Confidence 2678888888776554221 88888886 22322223322 468999
Q ss_pred EEeccccc-cCCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCC
Q 013461 270 TAAMGHAL-ATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIH 347 (442)
Q Consensus 270 i~S~sK~l-g~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~ 347 (442)
++|++|+| |..||++++++++++.+.. +.+++|+++++|..++++.+..+..+. .+++++++.+|.++|.+.|.+.
T Consensus 281 tgT~hKaL~GP~GG~I~~~~~l~~~L~~-a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~- 358 (493)
T PRK13580 281 TTTTHKTLRGPRGGLVLAKKEYADAVDK-GCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR- 358 (493)
T ss_pred EeCChhhccCCCeEEEEecHHHHHHHhh-CCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999 7889999999999999854 458999999999777766654444332 2568999999999999999986
Q ss_pred Cceeec-CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC-CCCceEEEecC----CCCHH
Q 013461 348 GLSIAS-NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR-LPVGIRLFVSA----AHSEA 421 (442)
Q Consensus 348 g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~-~~~~iRi~~~~----~~t~e 421 (442)
|+++.. ..+++++++.+++. ....+.+.+.|.+.||++.+..+|.++... .+++|||+++. .++++
T Consensus 359 G~~vv~ggTdshIV~V~lg~~--------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~tee 430 (493)
T PRK13580 359 GARLVTGGTDNHLVLIDVTSF--------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSD 430 (493)
T ss_pred CCCccCCCCCCCEEEEEeCCH--------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHH
Confidence 988753 35789999998431 122333444677889999999888876552 25679999998 67899
Q ss_pred HHHHHHHHHHHHHHH
Q 013461 422 DLVKACESLKRISAV 436 (442)
Q Consensus 422 ei~~~i~~l~~~~~~ 436 (442)
|++++++.|.++++.
T Consensus 431 di~~iad~l~~~l~~ 445 (493)
T PRK13580 431 EMDEVAELIVKVLSN 445 (493)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988764
No 107
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.92 E-value=9.4e-24 Score=211.58 Aligned_cols=307 Identities=14% Similarity=0.100 Sum_probs=200.6
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHH--HHhcCCCCCccCccccCcHHHHHHHHHHHh-
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSA--LEKYGVGSCGPRGFYGTIDVHLDCEARIAK- 165 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~--l~~~g~~~~~~~~~~g~~~~~~~le~~lA~- 165 (442)
.|..+++++|.|+| +||++||||.++ ....++ +||+|.+|+.++ ...+...+ . + ..+...++.++|++
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~----~-~-~~~~~~~la~~l~~~ 113 (464)
T TIGR00699 40 FLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP----A-L-GNFPSKDWAKILKEG 113 (464)
T ss_pred cceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc----c-C-CcHHHHHHHHHHHHh
Confidence 46678999999999 599999999654 444555 589999999985 33322211 1 1 23455667777644
Q ss_pred ---hhC--CCcEEEEcchHHHHHhhhhhhc------c------------------------CCCEEEeCCCchHHHHHHH
Q 013461 166 ---FLG--TPDSILYSYGLSTMFSAIPCFC------K------------------------KGDLIVADEGVHWGIQNGL 210 (442)
Q Consensus 166 ---~~g--~e~~i~~~sG~~a~~~ai~a~~------~------------------------~gd~Vi~~~~~h~s~~~~~ 210 (442)
+++ .+++++++||++|++.|++... + +.++|.+...+|+.+..++
T Consensus 114 l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~al 193 (464)
T TIGR00699 114 ILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSL 193 (464)
T ss_pred HHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHH
Confidence 553 4688999999999999997541 1 1258889999999988887
Q ss_pred HhcCCeE-----------EEecC-------------------CCHHHHHHHHHhhcccccc-------------------
Q 013461 211 YLSRSTV-----------VYFKH-------------------NDMDSLRNTLERVTADNKR------------------- 241 (442)
Q Consensus 211 ~l~g~~v-----------~~~~~-------------------~d~~~Le~~l~~~~~~~~~------------------- 241 (442)
.+++... ..++. ++++++++++++.......
T Consensus 194 s~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~y 273 (464)
T TIGR00699 194 STTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDF 273 (464)
T ss_pred HhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHH
Confidence 7655311 11111 1245567777643222111
Q ss_pred --------------------cccccccccCCCc-cccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCc
Q 013461 242 --------------------SNSFGVLGRSGRG-LTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSG 300 (442)
Q Consensus 242 --------------------a~~~g~~G~~g~g-~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~ 300 (442)
..++ |++|.+ ..+++|+. +..|| .+|+|++|. ||++++++. +......
T Consensus 274 l~~lr~lc~~~g~lLI~DEV~tGf---GrtG~~fa~e~~gv~-~~PDi--~t~gK~lg~-gG~~~~~~~----~~~~~~~ 342 (464)
T TIGR00699 274 FRKLRDITKKHNVAFIVDEVQTGV---GATGKFWAHEHWNLD-DPPDM--VTFSKKFQT-AGYFFHDPA----FRPNKPY 342 (464)
T ss_pred HHHHHHHHHHcCCEEEEeeeeeCC---CCCcchhHHHhcCCC-CCCCE--EEehhhhcc-CCccccchh----ccCCCCc
Confidence 2233 555554 56889986 12255 559999963 455555432 2111111
Q ss_pred eec-cCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC-CCce-----eecCCCCCEEEEEecCCCCCchh
Q 013461 301 YVF-SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI-HGLS-----IASNPESPIVFLILEKSTGSMKN 373 (442)
Q Consensus 301 ~~~-s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~-~g~~-----~~~~~~~~i~~~~~~~~~~~~~~ 373 (442)
+.+ +.+.+|+.|+++.++|+.+++. ++.++++++.++|++.|+++ ..++ +.+...+.++.+.+..
T Consensus 343 ~~~~T~~gnp~~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~------- 414 (464)
T TIGR00699 343 RQFNTWMGDPSRALILREIIQEIKRK-DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD------- 414 (464)
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC-------
Confidence 122 3345899999999999999764 48899999999999999765 1122 1111467778877631
Q ss_pred hHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 374 DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 374 ~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
......+.+.+++ +||++.+.. .+.|||.++..+|++||++++++|++++
T Consensus 415 -~~~~~~i~~~~~~-~Gvl~~~~g---------~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 415 -EAKRDKLLKKARN-NGVNIGGCG---------VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -HHHHHHHHHHHHH-CCcEEecCC---------CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 1224567776665 599987542 1349999999999999999999998763
No 108
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.3e-22 Score=200.61 Aligned_cols=307 Identities=20% Similarity=0.246 Sum_probs=218.4
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC----CCc-EEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG----TPD-SILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g----~e~-~i~~~sG~~a~~ 183 (442)
.++|||+.+++ ++..++.+++++.+++.+-+..+. ...|..++++.+.+.+.+.+| .++ +++++++++|+.
T Consensus 28 ~~vi~l~iG~P-d~~~p~~i~~a~~~a~~~~~~~Y~---~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~ 103 (393)
T COG0436 28 EDVIDLSIGEP-DFPTPEHIIEAAIEALEEGGTHYT---PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF 103 (393)
T ss_pred CCEEEeCCCCC-CCCCCHHHHHHHHHHHhcccCCCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence 47999988774 677788999999999987332222 344666666666666666666 234 777778889999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC----C----CHHHHHHHHHhhccc-------ccc-------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH----N----DMDSLRNTLERVTAD-------NKR------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~----~----d~~~Le~~l~~~~~~-------~~~------- 241 (442)
.++.+++++||+|++++|.|.++...+.+.|++++.++. + |.+++++.+.+.++. ++.
T Consensus 104 ~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~ 183 (393)
T COG0436 104 LAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKE 183 (393)
T ss_pred HHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHH
Confidence 999999999999999999999999999999999988873 1 467777777663321 111
Q ss_pred ----------ccccccccc--------CC---CccccccCCCC-CceeEEEEeccccccCCC---cEEEcC-HHhHHHHH
Q 013461 242 ----------SNSFGVLGR--------SG---RGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTGS-ARVVDHQR 295 (442)
Q Consensus 242 ----------a~~~g~~G~--------~g---~g~~~~~~v~~-~~~diii~S~sK~lg~~G---G~v~g~-~~~i~~l~ 295 (442)
.|++-++-+ ++ ..+.+ ..+ .+..|.+.||||+++++| ||++++ +++++.+.
T Consensus 184 ~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~---~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~ 260 (393)
T COG0436 184 ELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILE---LAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALR 260 (393)
T ss_pred HHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhh---cCCCcceEEEEecccccccccccceeEeecChHHHHHHHH
Confidence 333332211 11 11222 222 367899999999999988 999999 88888876
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHhhccCCCceeecCC-CCCEEEEEecCCCCCc
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLEE---NPDLITKLKKNTAILRTGLSDIHGLSIASNP-ESPIVFLILEKSTGSM 371 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~~---~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~-~~~i~~~~~~~~~~~~ 371 (442)
... .+..+ +.+.+...++.++|+.-+. ....++.++++++.+.+.|.+++|+.+..++ .+++++..++..
T Consensus 261 ~~~-~~~~~-~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~---- 334 (393)
T COG0436 261 KLK-SYLTS-CAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL---- 334 (393)
T ss_pred HHH-Hhccc-CCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC----
Confidence 332 22332 3355566677788875422 2345578999999999999988779887634 566667666432
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 372 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 372 ~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
....+++.++|++.||.+.|+..+..+.+ ...+|+++.. ++++++++++++.+++..
T Consensus 335 ----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g--~~~vRis~~~--~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 335 ----LDSEEFAKKLLEEAGVAVVPGSGFGEPPG--EGYVRLSLAT--SEETLEEALRRLARFLAE 391 (393)
T ss_pred ----CCHHHHHHHHHHhCCEEEecccccCCCCC--CCeEEEEEec--CHHHHHHHHHHHHHHHHh
Confidence 12347899999999999999988764211 1459999986 559999999999988764
No 109
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.92 E-value=1.3e-23 Score=207.71 Aligned_cols=298 Identities=22% Similarity=0.283 Sum_probs=210.6
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEEEEcchHHH
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYSYGLST 181 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i~~~sG~~a 181 (442)
++|||+++++.....+|.+.+++.+..+ +.........|+....+.++++.+|++++ .+..+++++|+.+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~ 79 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIR--GAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA 79 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHH--HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHH--HhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence 5899999999888777766666666554 11122233456677778999999999998 3436777788754
Q ss_pred -HHhhhhhh-ccCCCEEEeCCCchHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhhccccc--c---------
Q 013461 182 -MFSAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK-------HNDMDSLRNTLERVTADNK--R--------- 241 (442)
Q Consensus 182 -~~~ai~a~-~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~-------~~d~~~Le~~l~~~~~~~~--~--------- 241 (442)
+..+...+ .++||.|+++.++|+.+...++..|.+++.++ +.|+++|++.+++...+.. .
T Consensus 80 ~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~n 159 (363)
T PF00155_consen 80 ALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNN 159 (363)
T ss_dssp HHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBT
T ss_pred chhhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccc
Confidence 45555666 67999999999999999999999999999998 6799999999988532211 0
Q ss_pred -----------------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCC---cEEEcCHH
Q 013461 242 -----------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSAR 289 (442)
Q Consensus 242 -----------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~ 289 (442)
+|+....+..+.+.. ...++.....|++.||||++|+.| ||++++++
T Consensus 160 PtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~ 238 (363)
T PF00155_consen 160 PTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPI-RSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPE 238 (363)
T ss_dssp TTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHH-HGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHH
T ss_pred ccccccccccccchhhhhcccccceeeeeceeccccCCCccCcc-cccccccccceeeeeccccccccccccccccchhh
Confidence 333333332211110 122222222699999999999888 99999999
Q ss_pred hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh----cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 013461 290 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE----ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 365 (442)
Q Consensus 290 ~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~----~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~ 365 (442)
+++.++.....+.. +...+.++.+.+.... ...+++++++++.+++.+.|++. ++.+..++.+.++++.+.
T Consensus 239 ~~~~l~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~ 313 (363)
T PF00155_consen 239 LIERLRRFQRSGLS----SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLD 313 (363)
T ss_dssp HHHHHHHHHHHTTS----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEES
T ss_pred hhhhhhhccccccc----cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcc
Confidence 99998865433322 3333433444443322 34568889999999999999887 998886555556666552
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 366 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
. ....+++++++++.||.+.++..+.. +..+|+++ +.++++++++++++|
T Consensus 314 ~---------~~~~~l~~~L~~~~gi~v~pg~~~~~-----~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 314 P---------NDAEELAQELLEEYGILVRPGSYFGV-----PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp H---------HHHHHHHHHHHHHHTEEEEEGGGGTS-----TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred c---------chHHHHHHHHHHhCCEEEEecCCCCC-----CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 1 13457888777666999999887764 45699999 778999999999876
No 110
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=1.9e-22 Score=200.74 Aligned_cols=316 Identities=13% Similarity=0.076 Sum_probs=207.1
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCC-ccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSC-GPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPC 188 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~-~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a 188 (442)
++||+---.-+|. .++.+++++.+....++..+. .++...+..+.+.++++.+|+++|.+.++++++|++++..++.+
T Consensus 19 ~~~~~~~~~~~~p-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~ 97 (387)
T PRK09331 19 EFINLDPIQRGGI-LTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHS 97 (387)
T ss_pred cccccChhhcCCC-CCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHH
Confidence 4555532222333 256788888877755543222 44556677788999999999999999999999999999999999
Q ss_pred hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhc----ccccc----------------
Q 013461 189 FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVT----ADNKR---------------- 241 (442)
Q Consensus 189 ~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~----~~~~~---------------- 241 (442)
++++||.|+++...|.+.+.+++..|++++.+++ .|++++++.+++.. +..+.
T Consensus 98 l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l 177 (387)
T PRK09331 98 LCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADA 177 (387)
T ss_pred hcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccH
Confidence 9999999999999999999999999999998886 36889998887531 11111
Q ss_pred --------cccccccc--cCCCccccccCCCCCceeEEEEeccccccCC--CcEEEcCHHhHHHHHhhCCcee------c
Q 013461 242 --------SNSFGVLG--RSGRGLTEHCGVPVDKIDIVTAAMGHALATE--GGFCTGSARVVDHQRLSSSGYV------F 303 (442)
Q Consensus 242 --------a~~~g~~G--~~g~g~~~~~~v~~~~~diii~S~sK~lg~~--GG~v~g~~~~i~~l~~~~~~~~------~ 303 (442)
.++.-++- .++.|... ++....++|++++|++|+++++ +||+++++++++.++....+|. +
T Consensus 178 ~~I~~la~~~g~~livD~a~~~g~~~-~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (387)
T PRK09331 178 KKVAKVAHEYGIPFLLNGAYTVGRMP-VDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELL 256 (387)
T ss_pred HHHHHHHHHcCCEEEEECCcccCCcC-CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeee
Confidence 11111111 11111111 1111134799999999999754 3899999999988765443332 3
Q ss_pred cCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHH
Q 013461 304 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDI 381 (442)
Q Consensus 304 s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i 381 (442)
++++++..++++.++++.+.+..+.+++..++.+++++.|.+++|+++.. +..++++.+..+..............++
T Consensus 257 ~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 336 (387)
T PRK09331 257 GCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFL 336 (387)
T ss_pred ceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhH
Confidence 33344434444556676655434456777888899999999988998874 2345666655431000000000112356
Q ss_pred HHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 382 ADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 382 ~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+. |+++||...+.. ...+|...+..+|++|+++++++|++++++.
T Consensus 337 ~~~-L~~~gI~~~~~~---------~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 337 YEE-LKKRGIHGIKPG---------ATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred HHH-HHHcCceEEccC---------CceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 665 566799743211 1235555566689999999999999987653
No 111
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.91 E-value=9.5e-23 Score=204.85 Aligned_cols=307 Identities=16% Similarity=0.148 Sum_probs=197.4
Q ss_pred eecCCCCeEEE--CCeeEEEeecC-CCCCCC-CChHHH--HHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh--
Q 013461 96 LESAAGPHTII--SGKEVVNFASA-NYLGLI-GHEKLL--ESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL-- 167 (442)
Q Consensus 96 ~~~~~g~~~~~--~G~~~id~~s~-~~l~~~-~~p~v~--ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~-- 167 (442)
+++++|.|+|. ||++||||.++ ....++ +||+|. +|+.+++++.......+ ..-..+...++.++|++..
T Consensus 23 ~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~ 100 (431)
T TIGR03251 23 LDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSN--SDVYTVAMARFVDTFARVLGD 100 (431)
T ss_pred EEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhccccc--CCCCCHHHHHHHHHHHHhcCC
Confidence 58999999995 89999999554 444455 589999 99999998742111111 1123566678888888875
Q ss_pred -CCCcEEEEcchHHHHHhhhhhhc----------c-----CCCEEEeCCCchHHHHHHHHhcCCeEEE------------
Q 013461 168 -GTPDSILYSYGLSTMFSAIPCFC----------K-----KGDLIVADEGVHWGIQNGLYLSRSTVVY------------ 219 (442)
Q Consensus 168 -g~e~~i~~~sG~~a~~~ai~a~~----------~-----~gd~Vi~~~~~h~s~~~~~~l~g~~v~~------------ 219 (442)
+.+++.+++||++|++.|++... + +..+|.+...+|+.+..++.+++.....
T Consensus 101 ~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 180 (431)
T TIGR03251 101 PALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 180 (431)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccC
Confidence 24788999999999999997542 1 2357888999999988777765532000
Q ss_pred -e-----cC-------------CCHHHHHHHHHhhcccccc---------------------------------------
Q 013461 220 -F-----KH-------------NDMDSLRNTLERVTADNKR--------------------------------------- 241 (442)
Q Consensus 220 -~-----~~-------------~d~~~Le~~l~~~~~~~~~--------------------------------------- 241 (442)
. +. ++++++++.++........
T Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 260 (431)
T TIGR03251 181 DNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEV 260 (431)
T ss_pred CCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 1 11 1123444455432221100
Q ss_pred cccccccccCCCc-cccccCCCCCceeEEEEeccccccCCCcEEEcCH--HhHHHHHhhCCceeccCCCcHHHHHHHHHH
Q 013461 242 SNSFGVLGRSGRG-LTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSA--RVVDHQRLSSSGYVFSASLPPYLASAAITA 318 (442)
Q Consensus 242 a~~~g~~G~~g~g-~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~--~~i~~l~~~~~~~~~s~s~~p~~aaaa~aa 318 (442)
..++ |++|.+ ..+++|+.| ||+ +++|++ ..||++.+++ ++.+...........+.+.+|+.++++.++
T Consensus 261 ~tG~---GrtG~~~a~~~~gv~P---Di~--~~gK~~-~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~ 331 (431)
T TIGR03251 261 QTGV---GLTGTAWAYQQLGVQP---DIV--AFGKKT-QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRI 331 (431)
T ss_pred hhcc---CccchHHHHHhcCCCC---CEE--EecccC-ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHH
Confidence 2223 445544 457889987 455 599998 3467776654 222211110001112234689999999999
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHhhccC----CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEe
Q 013461 319 IDVLEENPDLITKLKKNTAILRTGLSDI----HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 319 l~~l~~~~~~~~~l~~~~~~l~~~L~~~----~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
|+++++.. +.++++++.+++.+.|+++ +++.......+.++.+.+.. .....++.+.++ ++||++.
T Consensus 332 L~~l~~~~-l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~--------~~~~~~~~~~l~-~~Gvl~~ 401 (431)
T TIGR03251 332 LEIIEEER-LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS--------TADRDEVIRQLY-REGVLLL 401 (431)
T ss_pred HHHHHhcC-HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC--------HHHHHHHHHHHH-hCCeEEe
Confidence 99997653 7788999999999888664 21221112346777887732 122346777655 5699987
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
+... ..+|++++..+|++||++++++|++
T Consensus 402 ~~g~---------~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 402 GCGE---------RSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred cCCC---------CeEEEECCccCCHHHHHHHHHHHHh
Confidence 6432 2399999999999999999999976
No 112
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=9e-22 Score=184.90 Aligned_cols=315 Identities=21% Similarity=0.254 Sum_probs=215.4
Q ss_pred CCCeeecCCCCeEE-ECCeeEEEeecCCC-CCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh-
Q 013461 92 EPPVLESAAGPHTI-ISGKEVVNFASANY-LGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL- 167 (442)
Q Consensus 92 ~~~~~~~~~g~~~~-~~G~~~id~~s~~~-l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~- 167 (442)
.|.++++.+|++.+ .+|++||||.+.++ -.++ .+|++.+++.++..+.+..+.+ +-+.+ ..++++.|.+..
T Consensus 38 ~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~----~~t~e-av~l~~~l~~~~~ 112 (433)
T KOG1401|consen 38 YPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNG----YFTLE-AVELEEVLSAVLG 112 (433)
T ss_pred CceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCc----cccHH-HHHHHHHHHhccc
Confidence 35778899999999 59999999966533 3333 3799999999999998765533 23445 788999999998
Q ss_pred --CCCcEEEEcchHHHHHhhhhhhc---cCC------CEEEeCCCchHHHHHHHHhcC------------CeEEEecCCC
Q 013461 168 --GTPDSILYSYGLSTMFSAIPCFC---KKG------DLIVADEGVHWGIQNGLYLSR------------STVVYFKHND 224 (442)
Q Consensus 168 --g~e~~i~~~sG~~a~~~ai~a~~---~~g------d~Vi~~~~~h~s~~~~~~l~g------------~~v~~~~~~d 224 (442)
..+++.+++||++||+.|+.... ..+ .+|.+...+|+-+..++...+ ..+....+||
T Consensus 113 ~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd 192 (433)
T KOG1401|consen 113 KGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYND 192 (433)
T ss_pred CCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCC
Confidence 47899999999999999996432 222 378899999998888777543 2355667899
Q ss_pred HHHHHHHHHhhcccccc---------------------------------------cccccccccCCCccccccCCCCCc
Q 013461 225 MDSLRNTLERVTADNKR---------------------------------------SNSFGVLGRSGRGLTEHCGVPVDK 265 (442)
Q Consensus 225 ~~~Le~~l~~~~~~~~~---------------------------------------a~~~g~~G~~g~g~~~~~~v~~~~ 265 (442)
+.++++.++.+..+... +.++|++|. .+..+++++.||
T Consensus 193 ~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~--~~a~e~~~~~PD- 269 (433)
T KOG1401|consen 193 STALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGY--GWAQEYFGVTPD- 269 (433)
T ss_pred HHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccch--HHHHHHhCcCCc-
Confidence 99999999987743221 666666654 345689999986
Q ss_pred eeEEEEecccccc--CCCcEEEcCHHhHHHHHhhCC---ceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 013461 266 IDIVTAAMGHALA--TEGGFCTGSARVVDHQRLSSS---GYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILR 340 (442)
Q Consensus 266 ~diii~S~sK~lg--~~GG~v~g~~~~i~~l~~~~~---~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~ 340 (442)
+.|++|.+| ++-|...+++++++.+....+ +.+|++ +|++|.++..+++.+.+ ++.++++.+..+.|+
T Consensus 270 ----I~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~g--npLacsa~~~~l~~l~~-~e~~k~vs~~~k~L~ 342 (433)
T KOG1401|consen 270 ----ITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSG--NPLACSAGIKVLDELKD-PETLKNVSKIGKELR 342 (433)
T ss_pred ----ceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCC--ChhhhhHHHHHHHHHcC-HHHHHHHHHHHHHHH
Confidence 667999996 334778899999999876655 444444 89999999999998865 568888888888888
Q ss_pred HhhccC---CCceeec-CCCCCEEEEEecCCCCCc----hhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEE
Q 013461 341 TGLSDI---HGLSIAS-NPESPIVFLILEKSTGSM----KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRL 412 (442)
Q Consensus 341 ~~L~~~---~g~~~~~-~~~~~i~~~~~~~~~~~~----~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi 412 (442)
+.|.+. ..-.+.+ ....-++++.+..+..+. ..+...........+ +.|+++.|. +
T Consensus 343 ~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~-~~gv~i~P~-~-------------- 406 (433)
T KOG1401|consen 343 KLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLL-EEGVRIAPI-Y-------------- 406 (433)
T ss_pred HHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccc-cceEEEecc-c--------------
Confidence 888653 1111111 122334444443221100 001111111222112 235655551 1
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 413 FVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 413 ~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.++..+|+|.++++++++.+.+.++
T Consensus 407 ~l~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 407 LLTVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred cccccCcHHHHHHHHHHHHHHHHHh
Confidence 1233357899999999999887765
No 113
>PLN00175 aminotransferase family protein; Provisional
Probab=99.90 E-value=3.6e-21 Score=192.93 Aligned_cols=311 Identities=15% Similarity=0.160 Sum_probs=201.9
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----C-cEEEEcchHHHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTM 182 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e-~~i~~~sG~~a~ 182 (442)
+..+|||+.+++ ++..++.+.+++.+++++ +. ..+....|..++.+.+.+.+.+..|. + +.++++++++++
T Consensus 53 ~~~~i~l~~G~P-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al 128 (413)
T PLN00175 53 KHGAINLGQGFP-NFDGPDFVKEAAIQAIRD-GK--NQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI 128 (413)
T ss_pred cCCeEecCCCCC-CCCCCHHHHHHHHHHHhc-CC--CCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence 346899987763 555678899999998875 21 11222234444444444444444452 2 356666667999
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhccc-------ccc--------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTAD-------NKR-------- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~-------~~~-------- 241 (442)
..++.+++++||.|+++++.|..+...++..|++++.++.. |+++|++.+...++. ++.
T Consensus 129 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~ 208 (413)
T PLN00175 129 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREE 208 (413)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHH
Confidence 99999999999999999999999999999999998887642 466777766432211 000
Q ss_pred ---------ccccccccc----------CCCccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCC
Q 013461 242 ---------SNSFGVLGR----------SGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 ---------a~~~g~~G~----------~g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~ 299 (442)
.|++-++-+ ....+.+..+. .+..|+++||||++|++| ||+++++++++.++....
T Consensus 209 l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~--~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~ 286 (413)
T PLN00175 209 LELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS 286 (413)
T ss_pred HHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC--cCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHh
Confidence 222222211 11111111111 356799999999999877 999999999998876532
Q ss_pred ceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 013461 300 GYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 378 (442)
Q Consensus 300 ~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 378 (442)
...++ .+++...++.++|+..+ ..++.++.++++++.+.+.|++. |+.+..+..+.++|+.+... +. . ..
T Consensus 287 ~~~~~--~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~f~~~~~~~~-~~--~---~~ 357 (413)
T PLN00175 287 FLTFA--TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVYPSSGTYFVMVDHTPF-GF--E---ND 357 (413)
T ss_pred hccCC--CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccc-CC--C---CH
Confidence 22233 34445555556664322 12457788999999999999886 78776544555667765321 10 0 12
Q ss_pred HHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 379 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 379 ~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.++++.+++++||.+.|+..+.......+..+||+++. +++++++++++|+++++
T Consensus 358 ~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 358 IAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred HHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 36777777778999998865432111112469999984 79999999999998764
No 114
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.9e-21 Score=191.27 Aligned_cols=307 Identities=17% Similarity=0.170 Sum_probs=203.6
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC----CCcEEEEcchHHHHHhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG----TPDSILYSYGLSTMFSA 185 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g----~e~~i~~~sG~~a~~~a 185 (442)
++|||+.+.. .+..++.+.+++.+.+.+.. ..+....|..++++.+++.+.+++| .++++++++|++++..+
T Consensus 25 ~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~ 100 (382)
T PRK06108 25 GVLPLWFGES-DLPTPDFIRDAAAAALADGE---TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA 100 (382)
T ss_pred CeEEecCCCC-CCCCCHHHHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH
Confidence 5789987653 45567899999998887521 1222234555666666666666666 25667777788999999
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhccc-------ccc---------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN--------DMDSLRNTLERVTAD-------NKR--------- 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~--------d~~~Le~~l~~~~~~-------~~~--------- 241 (442)
+.+++++||.|+++.++|..+...++..|++++.++.+ |++++++.++..... ++.
T Consensus 101 ~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~ 180 (382)
T PRK06108 101 AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDL 180 (382)
T ss_pred HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHH
Confidence 99999999999999999999888889999999887753 456676665432110 000
Q ss_pred --------cccccccccC---------CCccccccCC-CCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCc
Q 013461 242 --------SNSFGVLGRS---------GRGLTEHCGV-PVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSG 300 (442)
Q Consensus 242 --------a~~~g~~G~~---------g~g~~~~~~v-~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~ 300 (442)
.+++-++-+. +.......++ ++.+.+++++||||.+|++| ||+++++++++.+.... .
T Consensus 181 ~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~-~ 259 (382)
T PRK06108 181 RAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLI-E 259 (382)
T ss_pred HHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHH-H
Confidence 1121111110 0000011122 12346799999999998777 99999999998876542 1
Q ss_pred eeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 013461 301 YVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 379 (442)
Q Consensus 301 ~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 379 (442)
+. ..+.+++.+.++.++++..+ ..++.+++++++++++.+.|.+++|+++..+..+.++++.++... ...
T Consensus 260 ~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~--------~~~ 330 (382)
T PRK06108 260 YN-TSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVT--------DSL 330 (382)
T ss_pred hc-ccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCC--------CHH
Confidence 11 12345666666666665322 224577888999999999998877887765444556677764321 123
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
++++.+++++||.+.++..+.. . .+..+|++++. +++++++++++|+++++
T Consensus 331 ~~~~~ll~~~gV~v~pg~~f~~-~--~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 331 ALAKRLVDEAGLGLAPGTAFGP-G--GEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred HHHHHHHHhCCEEEeCchhhCC-C--CCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 6777767778999988765421 1 13469999997 89999999999988753
No 115
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.89 E-value=1.9e-21 Score=194.94 Aligned_cols=313 Identities=19% Similarity=0.217 Sum_probs=199.4
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHH-HhcCCCCCccCccccCcHHHHH----HHHHHHhhhCCCcE-EEEcchHHH
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSAL-EKYGVGSCGPRGFYGTIDVHLD----CEARIAKFLGTPDS-ILYSYGLST 181 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l-~~~g~~~~~~~~~~g~~~~~~~----le~~lA~~~g~e~~-i~~~sG~~a 181 (442)
+++||| ++.+++ +|+|++++.+.+ .+|+.+..+++.+.| .+...+ .++.+++++|.+.+ +++++|++|
T Consensus 19 ~~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASENFT----SPAVMEAMGSDLTNKYAEGYPGKRYYGG-CEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccCCcC----CHHHHHHhcccccccccCCCCCCcccCC-chHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 467887 677775 799999998876 578777777765444 333333 34467789998765 555789999
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHH-----HHhcCCeEEE--ecCC------CHHHHHHHHHhhcccccc-------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNG-----LYLSRSTVVY--FKHN------DMDSLRNTLERVTADNKR------- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~-----~~l~g~~v~~--~~~~------d~~~Le~~l~~~~~~~~~------- 241 (442)
+..++.+++++||.|+++.+.|++.... ++..|.++.. ++++ |++++++.+.....+...
T Consensus 94 ~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~ 173 (402)
T cd00378 94 NLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP 173 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC
Confidence 9999999999999999999988754332 4455655443 3333 788888887532211100
Q ss_pred -------------cccccccccC--CCcccc--ccCCCCCceeEEEEeccccc-cCCCcEEEcCH-HhHHHHHhhCCcee
Q 013461 242 -------------SNSFGVLGRS--GRGLTE--HCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSA-RVVDHQRLSSSGYV 302 (442)
Q Consensus 242 -------------a~~~g~~G~~--g~g~~~--~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~-~~i~~l~~~~~~~~ 302 (442)
.|+.-++-+. ..|... ........+|++++|++|++ |..||++++++ ++++.++....++.
T Consensus 174 ~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i~~~~~~~~~~l~~~~~~~~ 253 (402)
T cd00378 174 RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLILTRKGELAKKINSAVFPGL 253 (402)
T ss_pred CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEEEeccHHHHHHHHHHhCccc
Confidence 1111111110 111100 00011124589999999999 66789988876 88888876544444
Q ss_pred ccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeec-CCCCCEEEEEecCCCCCchhhHHHHHH
Q 013461 303 FSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIAS-NPESPIVFLILEKSTGSMKNDLQLLED 380 (442)
Q Consensus 303 ~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 380 (442)
++++..+..++++.+...... ..++.+++++++++++.+.|.+. |+.+.. +..++++++.++.... + ..+
T Consensus 254 ~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~----~---~~~ 325 (402)
T cd00378 254 QGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKGI----T---GKA 325 (402)
T ss_pred cCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCC----C---HHH
Confidence 444333333333333333333 33567788999999999999987 887753 3467888888753210 1 123
Q ss_pred HHHHHHHhCCEEEeeccCccccc-CCCCCceEEEecC----CCCHHHHHHHHHHHHHHHH
Q 013461 381 IADWALKEDGVFVVTSKRSMLDK-CRLPVGIRLFVSA----AHSEADLVKACESLKRISA 435 (442)
Q Consensus 381 i~~~~L~~~GV~v~~~~~~~~~~-~~~~~~iRi~~~~----~~t~eei~~~i~~l~~~~~ 435 (442)
+.+ .|+++||.+.+...|.... ...++++|++++. .++++|++++++.|++++.
T Consensus 326 ~~~-~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 326 AED-ALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred HHH-HHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 444 5677899998755444321 1123579999877 4579999999999998764
No 116
>PRK09082 methionine aminotransferase; Validated
Probab=99.88 E-value=1.2e-20 Score=188.04 Aligned_cols=307 Identities=15% Similarity=0.164 Sum_probs=203.0
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----C-cEEEEcchHHHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTM 182 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e-~~i~~~sG~~a~ 182 (442)
++++|||+.+. ..+..+|.+.+++.+.++..- ..+....|..++++.+++.+.+++|. + +.+++++|++++
T Consensus 29 ~~~~i~l~~g~-~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 29 EHGAINLSQGF-PDFDGPPYLVEALAYAMAAGH---NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred hCCEEEecCCC-CCCCCCHHHHHHHHHHHHcCC---CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 34679997764 345557889999888876421 12222346777888888888888774 2 456666778999
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhccc-------ccc--------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTAD-------NKR-------- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~-------~~~-------- 241 (442)
..++.+++++||.|+++.++|.++...++..|++++.++.+ |++++++.++...+. ++.
T Consensus 105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 184 (386)
T PRK09082 105 FAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAAD 184 (386)
T ss_pred HHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHH
Confidence 99999999999999999999999999999999999888763 566777766432210 000
Q ss_pred ---------cccccc----------ccc-CCCccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhC
Q 013461 242 ---------SNSFGV----------LGR-SGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 ---------a~~~g~----------~G~-~g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~ 298 (442)
.|++-+ ++. .+.....+.+. .+..++++||||++|++| ||+++++++++.++...
T Consensus 185 ~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~ 262 (386)
T PRK09082 185 MRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPEL--RERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVH 262 (386)
T ss_pred HHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCc--cCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHH
Confidence 122211 111 11111121111 346799999999999887 99999999999887654
Q ss_pred CceeccCCCcHHHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 013461 299 SGYVFSASLPPYLASAAITAIDV-LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 377 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~-l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 377 (442)
....++ .+++.+.++.+.++. -+...++++.++++++++.+.|++. ++++..+..+.++|+.++...+ ..
T Consensus 263 ~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~------~~ 333 (386)
T PRK09082 263 QYNTFT--VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAISD------LD 333 (386)
T ss_pred hhhcCC--CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccCC------CC
Confidence 322333 344444444444431 1122346678889999999999885 7777654445567777742101 01
Q ss_pred HHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 378 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 378 ~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
..++++.+++++||.+.++..+..... .+..+|++++. +++++++++++|++
T Consensus 334 ~~~~~~~l~~~~~v~v~pg~~f~~~~~-~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 334 DVEFCQWLTREHGVAAIPLSVFYADPF-PHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred HHHHHHHHHHhCCEEEeCcHHhCCCCC-CCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 236777667778999999875422111 12459999985 78999999998875
No 117
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.88 E-value=1.3e-20 Score=199.50 Aligned_cols=320 Identities=13% Similarity=0.100 Sum_probs=211.3
Q ss_pred CCCeeecCCCC----eEE-ECCe----eEEEeecC-CCCCCC--CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHH
Q 013461 92 EPPVLESAAGP----HTI-ISGK----EVVNFASA-NYLGLI--GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDC 159 (442)
Q Consensus 92 ~~~~~~~~~g~----~~~-~~G~----~~id~~s~-~~l~~~--~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~l 159 (442)
.+++|+++.|. |++ .+|+ +|||+.+. +..+++ +||+|.+|+.+++.+++.... ..-+.+...+|
T Consensus 339 ~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~----~~~~hepa~~L 414 (817)
T PLN02974 339 SVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMF----PENVHEPALRA 414 (817)
T ss_pred CceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcccc----CccCCHHHHHH
Confidence 46788999998 888 4897 99999554 556665 489999999999999865431 12256888999
Q ss_pred HHHHHhhhC---CCcEEEEcchHHHHHhhhhhh----c------------------cCCCEEEeCCCchHHHHHHHHhcC
Q 013461 160 EARIAKFLG---TPDSILYSYGLSTMFSAIPCF----C------------------KKGDLIVADEGVHWGIQNGLYLSR 214 (442)
Q Consensus 160 e~~lA~~~g---~e~~i~~~sG~~a~~~ai~a~----~------------------~~gd~Vi~~~~~h~s~~~~~~l~g 214 (442)
.++|++..+ .++++++++|++|++.|++.. . +|..+|.....||+.+..++.+++
T Consensus 415 Ae~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg 494 (817)
T PLN02974 415 AELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQA 494 (817)
T ss_pred HHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCC
Confidence 999999765 357888899999999999643 1 133478899999999998888765
Q ss_pred Ce--------E------EEe--c--------------CC--C-----------------------------HHHHHHHHH
Q 013461 215 ST--------V------VYF--K--------------HN--D-----------------------------MDSLRNTLE 233 (442)
Q Consensus 215 ~~--------v------~~~--~--------------~~--d-----------------------------~~~Le~~l~ 233 (442)
.. . .++ | .+ + .+.+++.|+
T Consensus 495 ~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~ 574 (817)
T PLN02974 495 PSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLD 574 (817)
T ss_pred chhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHH
Confidence 21 0 001 0 00 0 134566665
Q ss_pred hh-----cccccc----------------------------------------cccccccccCCCccccccCCCCCceeE
Q 013461 234 RV-----TADNKR----------------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDI 268 (442)
Q Consensus 234 ~~-----~~~~~~----------------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~di 268 (442)
.. .++... ..|||++|+ .+.++++|+.|| |
T Consensus 575 ~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~--~fa~e~~gv~PD---I 649 (817)
T PLN02974 575 EYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV--ESAWELLGCKPD---I 649 (817)
T ss_pred hhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc--hhhHHhcCCCCC---E
Confidence 31 111100 445555543 345688999985 4
Q ss_pred EEEeccccccC---CCcEEEcCHHhHHHHHhhC----CceeccCCCcHHHHHHHHHHHHHHhcCh---HHHHHHHHHHHH
Q 013461 269 VTAAMGHALAT---EGGFCTGSARVVDHQRLSS----SGYVFSASLPPYLASAAITAIDVLEENP---DLITKLKKNTAI 338 (442)
Q Consensus 269 ii~S~sK~lg~---~GG~v~g~~~~i~~l~~~~----~~~~~s~s~~p~~aaaa~aal~~l~~~~---~~~~~l~~~~~~ 338 (442)
.+++|+++. +-|.+++++++.+.+.... ....+|.+.+|+.|++++++|+++++.+ .+.++.++..++
T Consensus 650 --i~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~ 727 (817)
T PLN02974 650 --ACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLREL 727 (817)
T ss_pred --EeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 459999962 2356889999999874211 1122344569999999999999998652 344555555555
Q ss_pred HHHhh----ccCCCc-eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEE
Q 013461 339 LRTGL----SDIHGL-SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 413 (442)
Q Consensus 339 l~~~L----~~~~g~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~ 413 (442)
+.+.| .+.+.+ .+. ..+.++.+.+..+......+.....++.+.++.++||++++.. +.||+.
T Consensus 728 l~~~l~~~l~~~p~V~~VR--g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G----------nvi~l~ 795 (817)
T PLN02974 728 WDEELVRAISSLPNVERVV--SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG----------NVVYLM 795 (817)
T ss_pred HHHHHHHHHhhCCCeeEEE--eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC----------CEEEEe
Confidence 55555 222222 122 2456777777543221111122345677766625699998742 238999
Q ss_pred ecCCCCHHHHHHHHHHHHHHH
Q 013461 414 VSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 414 ~~~~~t~eei~~~i~~l~~~~ 434 (442)
++..++++|++++++++.+.+
T Consensus 796 pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 796 CGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999998764
No 118
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.88 E-value=6.3e-21 Score=171.66 Aligned_cols=327 Identities=14% Similarity=0.127 Sum_probs=227.4
Q ss_pred ccCCCeeecCCCCeEEE-CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHh-hh
Q 013461 90 RCEPPVLESAAGPHTII-SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAK-FL 167 (442)
Q Consensus 90 ~~~~~~~~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~-~~ 167 (442)
+.+|.-|.+++|.|... +|++|||.-+|-..+-..||+|++|..+++... +|..|+. .+-..+..+.|.. +-
T Consensus 27 ~sDP~kivRaq~QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~---~tN~RFl---hd~lv~cA~~l~stlP 100 (452)
T KOG1403|consen 27 RSDPLKIVRAQGQYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATI---STNNRFL---HDELVQCARTLTSTLP 100 (452)
T ss_pred cCCchhhehhccceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHh---cccchhh---HHHHHHHHHHHhhcCC
Confidence 34567789999999995 899999987775444346999999999998763 4444432 2333444444444 44
Q ss_pred CCCcEEEEcchHHHHHhhhhh---hccCCCEEEeCCCchHHHHHHHHhcCC---------eEEEe---c-----------
Q 013461 168 GTPDSILYSYGLSTMFSAIPC---FCKKGDLIVADEGVHWGIQNGLYLSRS---------TVVYF---K----------- 221 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a---~~~~gd~Vi~~~~~h~s~~~~~~l~g~---------~v~~~---~----------- 221 (442)
+.+-++|++||++||..|++. |.+..|+|..|..+|+.+...+.+|-- ++.++ |
T Consensus 101 eLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 101 ELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred CceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 567789999999999999864 689999999999999988776665421 11111 1
Q ss_pred -CC---C-----HHHHHHHHHhhcccccc------------------------------------------ccccccccc
Q 013461 222 -HN---D-----MDSLRNTLERVTADNKR------------------------------------------SNSFGVLGR 250 (442)
Q Consensus 222 -~~---d-----~~~Le~~l~~~~~~~~~------------------------------------------a~~~g~~G~ 250 (442)
++ | .++++++++....+... ..+||++|+
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~ 260 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS 260 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch
Confidence 11 2 23456666543322110 667777776
Q ss_pred CCCccccccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHH
Q 013461 251 SGRGLTEHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL 328 (442)
Q Consensus 251 ~g~g~~~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~ 328 (442)
+.|. .+.|++-|| +.||+|.+|- +-+.++..+++.+.+...+-.|..+...+|..||++++.++.++.+ ++
T Consensus 261 hyWa-fq~y~fiPD-----IVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E-~L 333 (452)
T KOG1403|consen 261 HYWA-FQTYNFIPD-----IVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDE-NL 333 (452)
T ss_pred hhhh-hhhhccccc-----hheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhh-hH
Confidence 5543 345677664 4569999973 3478899999999998777777667778999999999999988764 58
Q ss_pred HHHHHHHHHHHHHhhccCC-CceeecCC--CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC
Q 013461 329 ITKLKKNTAILRTGLSDIH-GLSIASNP--ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 405 (442)
Q Consensus 329 ~~~l~~~~~~l~~~L~~~~-g~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~ 405 (442)
+++.+..+++|...|.++. ..++.++- .+-++.+.+-.+.....++...+..++.++-+..+|+++.-.+-
T Consensus 334 q~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh------ 407 (452)
T KOG1403|consen 334 QEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPH------ 407 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCC------
Confidence 8999999999988887652 34555542 34466666655444444566666677776545568988753321
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 406 LPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 406 ~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.+-|.|-++...++++.++++..|++++..
T Consensus 408 -~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 408 -RNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred -CceeecCCCcccChhhHHHHHHHHHHHHHH
Confidence 133888888888999999999999998863
No 119
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.3e-19 Score=181.38 Aligned_cols=313 Identities=17% Similarity=0.164 Sum_probs=205.6
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-----CcEEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~-----e~~i~~~sG~~a~~ 183 (442)
++.+||+.++.--+..+|.+.+++.+.+.+.+. .++....|..++++.+.+.+++++|. +++++++++++++.
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGV--QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCC--ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 567898765432234568899999988876322 22223446667777777777777773 45677777789999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----------CHHHHHHHHHhhcccc-------cc-----
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----------DMDSLRNTLERVTADN-------KR----- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----------d~~~Le~~l~~~~~~~-------~~----- 241 (442)
.++.+++++||.|++..++|+.+...++..|++++.++.. |+++|++.+++..+.. +.
T Consensus 117 ~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s 196 (405)
T PRK06207 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYS 196 (405)
T ss_pred HHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCC
Confidence 9999999999999999999999998899999998776532 5777877765432211 10
Q ss_pred ------------cccccccccC--------CCccccccCCC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhh
Q 013461 242 ------------SNSFGVLGRS--------GRGLTEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLS 297 (442)
Q Consensus 242 ------------a~~~g~~G~~--------g~g~~~~~~v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~ 297 (442)
.|++-++-+. +........+. ..+..|+++||||++|++| ||+++++++++.+...
T Consensus 197 ~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~ 276 (405)
T PRK06207 197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL 276 (405)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence 2232222111 11000001111 1245699999999998666 9999999999988765
Q ss_pred CCceeccCCCcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHH
Q 013461 298 SSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 298 ~~~~~~s~s~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 376 (442)
...+.. +.+.+.+.++.++++.- ....+.+++++++++.+.+.|++++++++..+..+.++|+.++... .+
T Consensus 277 ~~~~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~----~~-- 348 (405)
T PRK06207 277 QAIVSL--RAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLA----VS-- 348 (405)
T ss_pred HhHhcc--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccC----CC--
Confidence 433222 22444555555555421 1123456677778888888888776777664445778888874310 01
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..++++.+++++||.+.++..+... .+..+||+++. +++++++++++|++++++.
T Consensus 349 -~~~~~~~l~~~~gV~v~pG~~F~~~---~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 349 -LHDFVKILRLQAGVIVTPGTEFSPH---TADSIRLNFSQ--DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred -HHHHHHHHHHhcCEEEeCchHhCCC---CCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 2357776665679999998754311 13569999985 7899999999999988654
No 120
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.87 E-value=6e-20 Score=183.49 Aligned_cols=308 Identities=19% Similarity=0.237 Sum_probs=202.4
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----CcEEEEcchH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYGL 179 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e~~i~~~sG~ 179 (442)
+.+++||+.++. .+..++++.+++.+.+.+.... |+......+|++.+|+++ |. ++.+++++++
T Consensus 30 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 101 (393)
T PRK05764 30 GRDVISLGAGEP-DFDTPEHIKEAAIEALDDGKTK-------YTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAK 101 (393)
T ss_pred cCCEEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCC-------cCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcH
Confidence 446899987763 5556789999998888753222 222223456777777665 32 4567777778
Q ss_pred HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhccccc-------c----
Q 013461 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADNK-------R---- 241 (442)
Q Consensus 180 ~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~-------~---- 241 (442)
+++..++.+++++||.|++++++|..+...++..|.+++.++.+ |++++++.++....... .
T Consensus 102 ~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~ 181 (393)
T PRK05764 102 QALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVY 181 (393)
T ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCccc
Confidence 99999999999999999999999999988889999999888763 35677776643211100 0
Q ss_pred -------------cccccccccC--------C---CccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHH
Q 013461 242 -------------SNSFGVLGRS--------G---RGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 294 (442)
Q Consensus 242 -------------a~~~g~~G~~--------g---~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l 294 (442)
.|++-++-+. + ....+ ...+..+.+++++||||.+|..| ||+++++++++.+
T Consensus 182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~ 260 (393)
T PRK05764 182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIAS-LSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAM 260 (393)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHH-cCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHH
Confidence 2222111111 1 11111 10111246899999999998777 9999999999988
Q ss_pred HhhCCceeccCCCcHHHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchh
Q 013461 295 RLSSSGYVFSASLPPYLASAAITAIDV-LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKN 373 (442)
Q Consensus 295 ~~~~~~~~~s~s~~p~~aaaa~aal~~-l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 373 (442)
+.....+ ....+++.+.++.++++. .+...+++++++++.+++.+.|++++|+++..+..+.++++.+......
T Consensus 261 ~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~--- 335 (393)
T PRK05764 261 SKLQSHS--TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGK--- 335 (393)
T ss_pred HHHHhhc--ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEeccccccc---
Confidence 7553322 223456666666666642 1222456778888889999999887788776543445666666432110
Q ss_pred hHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 374 DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 374 ~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
......++.+.+++++||.+.++..+.. +..+||++. ++++++++++++|.+++++
T Consensus 336 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~-----~~~vRis~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 336 SITDSLEFAEALLEEAGVAVVPGIAFGA-----PGYVRLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred ccCCHHHHHHHHHHhCCEEEccccccCC-----CCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 0001236777667778999998765432 356999987 4799999999999988764
No 121
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.87 E-value=8.3e-21 Score=185.69 Aligned_cols=291 Identities=16% Similarity=0.188 Sum_probs=194.5
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccC
Q 013461 113 NFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKK 192 (442)
Q Consensus 113 d~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~ 192 (442)
||+|+|++| .+|.+++++.+++...+ .|+..+.+.++++.+++++|.++.+++++|++++..++.++.++
T Consensus 1 ~~~~~~~~~--~~~~v~~a~~~~~~~~~--------~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~ 70 (338)
T cd06502 1 DFRSDTVTG--PTPEMLEAMAAANVGDD--------VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQP 70 (338)
T ss_pred CcccccCCC--CCHHHHHHHHhcccCCc--------ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCC
Confidence 689999888 46999999987653221 34456778999999999999778899999999999999999999
Q ss_pred CCEEEeCCCchHHHHH---HHHhcCCeEEEecC----CCHHHHHHHHHhhc----ccccc--------------------
Q 013461 193 GDLIVADEGVHWGIQN---GLYLSRSTVVYFKH----NDMDSLRNTLERVT----ADNKR-------------------- 241 (442)
Q Consensus 193 gd~Vi~~~~~h~s~~~---~~~l~g~~v~~~~~----~d~~~Le~~l~~~~----~~~~~-------------------- 241 (442)
||.|++++++|.+... ...+.|++++.++. .|.+++++.+++.. +..+.
T Consensus 71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~ 150 (338)
T cd06502 71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKA 150 (338)
T ss_pred CCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHH
Confidence 9999999999987653 24457888888876 46788888776421 01110
Q ss_pred ------cccccccccCC--CccccccCCC----CCceeEEEEeccccccCCCcE-EEcCHHhHHHHHhhCCceeccCCCc
Q 013461 242 ------SNSFGVLGRSG--RGLTEHCGVP----VDKIDIVTAAMGHALATEGGF-CTGSARVVDHQRLSSSGYVFSASLP 308 (442)
Q Consensus 242 ------a~~~g~~G~~g--~g~~~~~~v~----~~~~diii~S~sK~lg~~GG~-v~g~~~~i~~l~~~~~~~~~s~s~~ 308 (442)
.|+.-++-+.- .+.....+.. ..+.|+++.|+||++|++||+ +++++++++.++.....+..+.+.+
T Consensus 151 i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd06502 151 ISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQAGGGMRQS 230 (338)
T ss_pred HHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHHhCCChhhH
Confidence 12211111100 0000001100 134688899999999976654 6789999888765432222223345
Q ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHH--
Q 013461 309 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWAL-- 386 (442)
Q Consensus 309 p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L-- 386 (442)
++.++++.++|+.- ...+..+++.++++++.+.|+++ |+.+. ++.++++.+.++.. .....++.+++.
T Consensus 231 ~~~~~a~~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~v~~~~~-------~~~~~~l~~~l~~~ 300 (338)
T cd06502 231 GFLAAAGLAALEND-LWLRRLRHDHEMARRLAEALEEL-GGLES-EVQTNIVLLDPVEA-------NAVFVELSKEAIER 300 (338)
T ss_pred HHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHhc-CCCcc-cccCCeEEEecCCc-------cHHHHHHHHHHHHh
Confidence 66666666666531 12346678888899999999887 66544 35678887776321 111223333322
Q ss_pred HhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 387 KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 387 ~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
.++|+.+.+... ..||++++..+|++|++++++++++
T Consensus 301 ~~~gi~~~~~~~---------~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 301 RGEGVLFYAWGE---------GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred hhCCEEEEecCC---------CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 146998876532 3499999999999999999999865
No 122
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=9.1e-20 Score=181.20 Aligned_cols=307 Identities=16% Similarity=0.135 Sum_probs=195.6
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----C-cEEEEcchHHHHHh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTMFS 184 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e-~~i~~~sG~~a~~~ 184 (442)
.+|+|+.+.. .+..++.+.+++.+.++..-..++ ...|..+++..+.+.+.+.+|. + +++++++|++++..
T Consensus 21 ~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~---~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 96 (378)
T PRK07682 21 GVISLGVGEP-DFVTPWNVREASIRSLEQGYTSYT---ANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDV 96 (378)
T ss_pred CeEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCCCC---CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 5789977653 344567788888888764111121 1234444444444444443342 3 46666777899999
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhccc-------ccc---------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTAD-------NKR--------- 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~-------~~~--------- 241 (442)
++.+++++||.|++++++|+.+...++..|.+++.++. .|++++++.+....+. ++.
T Consensus 97 ~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~ 176 (378)
T PRK07682 97 AMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSEL 176 (378)
T ss_pred HHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHH
Confidence 99999999999999999999988888888988877753 1567777765432111 000
Q ss_pred --------cccccccccC--------C--CccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCc
Q 013461 242 --------SNSFGVLGRS--------G--RGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSG 300 (442)
Q Consensus 242 --------a~~~g~~G~~--------g--~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~ 300 (442)
.|++-++-+. + ..+....+. .+.+++++||||++|++| ||+++++++++.+.....
T Consensus 177 ~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~- 253 (378)
T PRK07682 177 EEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGM--RERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQ- 253 (378)
T ss_pred HHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccc--cCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHH-
Confidence 2222211110 1 111111111 246799999999999777 999999999998865432
Q ss_pred eeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 013461 301 YVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 379 (442)
Q Consensus 301 ~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 379 (442)
+. ..+.+++.+.++.++|+..+ ...++++.++++++++.+.|++. |+++..+..+.++|..+..... + ..
T Consensus 254 ~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~~~----~---~~ 324 (378)
T PRK07682 254 YS-MMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISSTGL----S---SE 324 (378)
T ss_pred hh-ccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCCCC----C---HH
Confidence 11 12335566666666665321 22456778899999999999987 8776544344455555532110 1 23
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
++++.+++++||.+.++..+... .+..+||+++. +++++++++++|+++++++
T Consensus 325 ~~~~~ll~~~gv~v~pg~~f~~~---~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 325 EFAEQLLLEEKVAVVPGSVFGES---GEGFIRCSYAT--SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred HHHHHHHHhCCEEEcCchhhCcC---CCCeEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 67777676679999987654311 13569999985 6899999999999987653
No 123
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=3.4e-20 Score=186.55 Aligned_cols=314 Identities=19% Similarity=0.208 Sum_probs=198.7
Q ss_pred eeEEEeec-CCCCCCCCChHHHHHHHHHHH-hcCCCCCccCccccCcHHHHHHHH----HHHhhhCCCcE-EEEcchHHH
Q 013461 109 KEVVNFAS-ANYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTIDVHLDCEA----RIAKFLGTPDS-ILYSYGLST 181 (442)
Q Consensus 109 ~~~id~~s-~~~l~~~~~p~v~ea~~~~l~-~~g~~~~~~~~~~g~~~~~~~le~----~lA~~~g~e~~-i~~~sG~~a 181 (442)
+.+||+.+ .|+ .+|+|++++.+.+. .|+.++++++.+.| .+.+.++++ .+++++|.+.. +++++|+++
T Consensus 25 ~~~~~l~~~~n~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~a 99 (416)
T PRK00011 25 EEHIELIASENF----VSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQA 99 (416)
T ss_pred hcCeeeecccCc----CCHHHHHHHhchhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhCCCceeeecCCchHH
Confidence 56788854 466 37999999988764 57777776665444 344555655 89999998766 666889999
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHH---HH--HhcCCeEEEecC------CCHHHHHHHHHhhcccccc---------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQN---GL--YLSRSTVVYFKH------NDMDSLRNTLERVTADNKR--------- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~---~~--~l~g~~v~~~~~------~d~~~Le~~l~~~~~~~~~--------- 241 (442)
+..++.+++++||.|+++.++|.+... .. ...|.++++++. .|++++++.+++...+...
T Consensus 100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~~~~ 179 (416)
T PRK00011 100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAYSRP 179 (416)
T ss_pred HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcCCCc
Confidence 999999999999999999999875421 11 223456666553 3688888888642111000
Q ss_pred -----------ccccccccc--CCCcccc--ccCCCCCceeEEEEeccccc-cCCCcEEEcC-HHhHHHHHhhCCceecc
Q 013461 242 -----------SNSFGVLGR--SGRGLTE--HCGVPVDKIDIVTAAMGHAL-ATEGGFCTGS-ARVVDHQRLSSSGYVFS 304 (442)
Q Consensus 242 -----------a~~~g~~G~--~g~g~~~--~~~v~~~~~diii~S~sK~l-g~~GG~v~g~-~~~i~~l~~~~~~~~~s 304 (442)
.|+.-++-+ +..|... .+......+|++++|++|++ |..||+++++ +++++.++.....+.++
T Consensus 180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~gg~i~~~~~~~~~~l~~~~~~~~~~ 259 (416)
T PRK00011 180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRGGLILTNDEELAKKINSAVFPGIQG 259 (416)
T ss_pred cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCceEEEeCCHHHHHHHHHHhCccccC
Confidence 111111111 0111110 01111125689999999999 5678999885 68888887655444444
Q ss_pred CCCcHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHhhccCCCceeec-CCCCCEEEEEecCCCCCchhhHHHHHHHH
Q 013461 305 ASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIAS-NPESPIVFLILEKSTGSMKNDLQLLEDIA 382 (442)
Q Consensus 305 ~s~~p~~aaaa~aal~~l~~~-~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~i~ 382 (442)
+...+..++...+.++.+++. ++..++++++++++++.|++. |+++.. ...++++++.+.+. + .+ ..++.
T Consensus 260 ~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~-~---~~---~~~~~ 331 (416)
T PRK00011 260 GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSK-G---LT---GKEAE 331 (416)
T ss_pred CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCccc-C---CC---HHHHH
Confidence 433344444344444544433 567889999999999999986 887653 23457888877421 1 01 12455
Q ss_pred HHHHHhCCEEEeeccCccc-ccCCCCCceEEEecC----CCCHHHHHHHHHHHHHHHHH
Q 013461 383 DWALKEDGVFVVTSKRSML-DKCRLPVGIRLFVSA----AHSEADLVKACESLKRISAV 436 (442)
Q Consensus 383 ~~~L~~~GV~v~~~~~~~~-~~~~~~~~iRi~~~~----~~t~eei~~~i~~l~~~~~~ 436 (442)
+ .|+++||.+.....+.. .....+.++|++... .+|++|+++++++|++++..
T Consensus 332 ~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 332 A-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred H-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 5 46677999975432211 011124569996532 67899999999999987653
No 124
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.1e-19 Score=179.93 Aligned_cols=298 Identities=14% Similarity=0.153 Sum_probs=194.6
Q ss_pred CCee-EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC-cEEEEcch-HHHHH
Q 013461 107 SGKE-VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYG-LSTMF 183 (442)
Q Consensus 107 ~G~~-~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e-~~i~~~sG-~~a~~ 183 (442)
.|+. +|||+.|+ .+++.+|.+++++.+.+... .+ |+... ..+|++.||++++.+ +.|++++| .+++.
T Consensus 29 ~g~~~~~~l~~~~-~~~~~~~~~~~a~~~~~~~~-~~-------Y~~~~-~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~ 98 (369)
T PRK08153 29 RGRPFRARIGANE-SGFGPSPSVIAAMREAAAEI-WK-------YGDPE-NHDLRHALAAHHGVAPENIMVGEGIDGLLG 98 (369)
T ss_pred cCCcceeEecCCC-CCCCCCHHHHHHHHHHHHHh-hc-------CCCCc-cHHHHHHHHHHhCCCHHHEEEcCCHHHHHH
Confidence 3454 57998886 47777899999998876541 11 11111 479999999999853 34555555 57788
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-CCHHHHHHHHHhhcc-cccc--------------------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-NDMDSLRNTLERVTA-DNKR-------------------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-~d~~~Le~~l~~~~~-~~~~-------------------- 241 (442)
.++.+++++||.|++++++|+.+...+...|++++.++. +|..+++++++.... ..+.
T Consensus 99 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~ 178 (369)
T PRK08153 99 LIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIV 178 (369)
T ss_pred HHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHH
Confidence 888888999999999999999988888888999888774 444445554443211 1111
Q ss_pred ------cccccccccC-----C-CccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCC
Q 013461 242 ------SNSFGVLGRS-----G-RGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSAS 306 (442)
Q Consensus 242 ------a~~~g~~G~~-----g-~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s 306 (442)
.++.-++-+. + .+....+.. ..+..++++||||++|++| ||+++++++++.+...... + +
T Consensus 179 ~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~-~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~--~--~ 253 (369)
T PRK08153 179 AFIEALPETTLLVLDEAYCETAPAGAAPPIDT-DDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH--F--G 253 (369)
T ss_pred HHHHhCCCCcEEEEeCchhhhcCcccchhhhh-cCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC--C--C
Confidence 1111111110 0 011111111 1234688999999999888 9999999999988765432 2 3
Q ss_pred CcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHH
Q 013461 307 LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWAL 386 (442)
Q Consensus 307 ~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L 386 (442)
.+++.++++.++++.-+.....++.++++++++.+.|++. |+.+. ++.++++++.+..+ .....++.++++
T Consensus 254 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~-------~~~a~~l~~~l~ 324 (369)
T PRK08153 254 MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD-------GAFARAVLDGLI 324 (369)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC-------cccHHHHHHHHH
Confidence 4677777777777522222346677788888888888876 77644 45677777766321 112446777655
Q ss_pred HhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 387 KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 387 ~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
++||.++....+. .+..+||++. +++|+++++++|++++...
T Consensus 325 -~~Gi~v~~p~~~~-----~~~~iRis~~---~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 325 -ARDIFVRMPGVAP-----LDRCIRVSCG---PDEELDLFAEALPEALEAA 366 (369)
T ss_pred -HCCeEEeeCCCCC-----CCCeEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 5699995321111 1246999997 7999999999999987643
No 125
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=7.1e-20 Score=180.71 Aligned_cols=291 Identities=14% Similarity=0.106 Sum_probs=198.8
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHh
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ 184 (442)
+++++|+|+.|. ..++.+|.+++++.+.+.+... + | .....+|++.||+++|.+ ++++++++++++..
T Consensus 27 ~~~~~i~l~~ne-n~~~~~~~v~~a~~~~~~~~~~-Y--p------~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 27 GDHSFVKLASNE-NPFGCSPRVLDELQKSWLDHAL-Y--P------DGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCCceEEeCCCC-CCCCCCHHHHHHHHHHHHhcCc-C--C------CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 356889998774 2455679999999887765211 1 1 112468999999999853 45555556689999
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhccc-------ccc------------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTAD-------NKR------------ 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~~-------~~~------------ 241 (442)
++.+++++||.|++..++|..+...+...|.+++.++.+ |++++++.+++.++. ++.
T Consensus 97 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l 176 (366)
T PRK01533 97 ISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQF 176 (366)
T ss_pred HHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHH
Confidence 999999999999999999999999999999999888753 577777766432211 110
Q ss_pred -----cccccccccCCCccc------ccc-CCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCC
Q 013461 242 -----SNSFGVLGRSGRGLT------EHC-GVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSAS 306 (442)
Q Consensus 242 -----a~~~g~~G~~g~g~~------~~~-~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s 306 (442)
.+.+-++.+....+. ... .++..+..|+++||||++|++| ||+++++++++.++..... .+
T Consensus 177 ~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~~----~~ 252 (366)
T PRK01533 177 IEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRLP----FN 252 (366)
T ss_pred HHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcCC----CC
Confidence 122222222111100 000 1112346799999999999877 9999999999988765322 24
Q ss_pred CcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHH
Q 013461 307 LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWAL 386 (442)
Q Consensus 307 ~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L 386 (442)
.+++...++.++|+.-+..+..++..+++.+++.+.++.+ |+++. +++++++++.+.. ..++.+. |
T Consensus 253 ~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~~-----------~~~~~~~-l 318 (366)
T PRK01533 253 VSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVEN-----------GGEIYEA-C 318 (366)
T ss_pred cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCCC-----------HHHHHHH-H
Confidence 5677777777777432222345666677777888888776 77765 3578888887631 1256665 4
Q ss_pred HhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 387 KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 387 ~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
.++||.|++. ++.+||++. +.+|+++++++|+++++...
T Consensus 319 ~~~GI~Vr~~----------~~~iRis~~---~~~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 319 AHAGFIIRPF----------PNGVRITVG---TREQNEGVISVLQQHFENKK 357 (366)
T ss_pred HHCCcEEccC----------CCceEEeCC---CHHHHHHHHHHHHHHHHhcc
Confidence 4679999872 245999997 88999999999999876544
No 126
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=2e-20 Score=189.51 Aligned_cols=308 Identities=17% Similarity=0.172 Sum_probs=200.7
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHHH-hcCCCCCccCccccCcHHHHHH----HHHHHhhhCCCc-EE-EE---cc
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSALE-KYGVGSCGPRGFYGTIDVHLDC----EARIAKFLGTPD-SI-LY---SY 177 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l~-~~g~~~~~~~~~~g~~~~~~~l----e~~lA~~~g~e~-~i-~~---~s 177 (442)
++.||+ +|.|++ +|.+++++...+. +|+.+..+++...|. +....+ ++++++++|.+. .+ +. ++
T Consensus 34 ~~~l~l~~sen~~----s~~v~~~~~~~l~~~y~~g~p~s~~~~g~-~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 34 IEGLELIASENFT----SRAVLECLGSCFTNKYAEGLPGNRYYGGN-EVVDKIENLCQKRALEAFGLDPEEWGVNVQPYS 108 (452)
T ss_pred HcCeeEecccccC----CHHHHHHhcchhhccccCCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCcccceeecCCCc
Confidence 467888 788874 6899999999885 476566666655554 333444 468999999653 23 22 68
Q ss_pred hHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH-hc---------CCeEEEecCC-----CHHHHHHHHHhhcccccc-
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LS---------RSTVVYFKHN-----DMDSLRNTLERVTADNKR- 241 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~-l~---------g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~- 241 (442)
|+++|..++.++.++||.|++++..|++...... +. ...+.+++++ |+++|++.+++..++...
T Consensus 109 gt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~ 188 (452)
T PTZ00094 109 GSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIA 188 (452)
T ss_pred hHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999999999999987654321 11 1223445554 899999999653322111
Q ss_pred -----------------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHHhH
Q 013461 242 -----------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARVV 291 (442)
Q Consensus 242 -----------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~~i 291 (442)
+|++|.++..+ +..+.+++|++++|.+|++ |..||+++.++++.
T Consensus 189 ~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~------~~~~~~~~D~l~~S~hK~l~GP~Gg~l~~~~~~~ 262 (452)
T PTZ00094 189 GASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGV------LPSPFPYADVVTTTTHKSLRGPRSGLIFYRKKVK 262 (452)
T ss_pred eCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCC------CCCCCCCCcEEEcCCccCCCCCCceEEEEecccc
Confidence 44444443211 1111236899999999988 67788888877665
Q ss_pred HHHHhhCCcee---ccCCCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEEec
Q 013461 292 DHQRLSSSGYV---FSASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLILE 365 (442)
Q Consensus 292 ~~l~~~~~~~~---~s~s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~~~i~~~~~~ 365 (442)
+.+........ +.+++++...++..++++.+.. .+++.+++.++.++|.+.|.+. |+++..+ ..+++..+.+.
T Consensus 263 ~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~ 341 (452)
T PTZ00094 263 PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLR 341 (452)
T ss_pred hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCC
Confidence 54433222222 2235566777777788988843 2467889999999999999885 8887642 22455555443
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCC----CHHHHHHHHHHHHHHHHH
Q 013461 366 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAH----SEADLVKACESLKRISAV 436 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~----t~eei~~~i~~l~~~~~~ 436 (442)
... .+ ..++.. .|++.||.+.....|.......+++||++++..+ +++|++++++.|++++..
T Consensus 342 ~~~----~~---~~~~~~-~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 342 PFG----IT---GSKMEK-LLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred cCC----CC---HHHHHH-HHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 211 11 123444 5777899996432222111112467999996554 499999999999998874
No 127
>PRK12414 putative aminotransferase; Provisional
Probab=99.87 E-value=1.7e-19 Score=179.39 Aligned_cols=306 Identities=16% Similarity=0.209 Sum_probs=198.2
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-----CcEEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~-----e~~i~~~sG~~a~~ 183 (442)
+.+|||+.+.. .+..++.+.+++.+.+.+ +. ..+....|..++++.+++.+++++|. ++++++++|++++.
T Consensus 29 ~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~ 104 (384)
T PRK12414 29 HDALNLSQGAP-NFAPDPALVEGVARAMRD-GH--NQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLY 104 (384)
T ss_pred CCeEEcCCCCC-CCCCCHHHHHHHHHHHHh-CC--CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHH
Confidence 46899987753 455678899999887764 21 12222346677778888888888784 35788888889999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhccc-------ccc---------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTAD-------NKR--------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~-------~~~--------- 241 (442)
.++.+++++||.|+++.++|..+...++..|.+++.++.+ |+++|++.++...+. ++.
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~ 184 (384)
T PRK12414 105 AAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADL 184 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHH
Confidence 9999999999999999999998888888889988877643 456676665432110 000
Q ss_pred --------cccccccccC--------CC---ccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCC
Q 013461 242 --------SNSFGVLGRS--------GR---GLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 --------a~~~g~~G~~--------g~---g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~ 299 (442)
.|++-++-+. +. .+..+.+ ..+..|+++||||++|++| ||+++++++++.+.....
T Consensus 185 ~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~--~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~ 262 (384)
T PRK12414 185 ARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE--LAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQ 262 (384)
T ss_pred HHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC--ccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHh
Confidence 1222221110 10 1111111 1235699999999998777 999999999988876532
Q ss_pred ceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 013461 300 GYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 379 (442)
Q Consensus 300 ~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 379 (442)
...++. +.+.+.++.++++.-....+.++.++++++.+.+.|++. |+.+..+..+.++|+.+...... . ..
T Consensus 263 ~~~~~~--s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~~--~----~~ 333 (384)
T PRK12414 263 FMVFSA--DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSDE--S----DS 333 (384)
T ss_pred heecCC--CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCCC--C----HH
Confidence 222333 334444444555321112246778899999999999886 77766443444555555321000 0 12
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
+++..+++++||.+.++..+.... ...+.+||+++. +++++++++++|.+
T Consensus 334 ~~~~~~l~~~gV~v~pg~~f~~~~-~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 334 DFVLRLIRDARVATIPLSAFYTDG-TDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHhCCEEEecchhhcCCC-CCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 456556777899999987543211 112469999995 68999999998864
No 128
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=8.4e-20 Score=180.72 Aligned_cols=293 Identities=16% Similarity=0.143 Sum_probs=195.6
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC-cEEEEcch-HHHHH
Q 013461 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYG-LSTMF 183 (442)
Q Consensus 107 ~G~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e-~~i~~~sG-~~a~~ 183 (442)
++++++||+++ ++++ .+|.+++++.+.+..+. .+ +.. ...++++.+|++++.+ +.|++++| ++++.
T Consensus 30 ~~~~~i~l~~~~~~~~--~~~~~~~a~~~~~~~~~-~y-------~~~-~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 30 GIADIIKLASNENPLG--PSPKAIEAIRAAADELH-RY-------PDG-SGFELKAALAEKFGVDPERIILGNGSDEILE 98 (367)
T ss_pred CCCceEEecCCCCCCC--CCHHHHHHHHHHHHhhc-CC-------CCC-cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 57789999887 5665 46889999998876532 11 111 1368999999999864 34555555 56777
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhcccc-------cc-----------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADN-------KR----------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~~~-------~~----------- 241 (442)
.++.+++++||.|+++.++|..+...+...|++++.++.+ |++++++.+...++-. +.
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 178 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVER 178 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHH
Confidence 7788889999999999999988777778889999888753 5677776664321110 00
Q ss_pred ----c-ccccccccC--------C--CccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceec
Q 013461 242 ----S-NSFGVLGRS--------G--RGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVF 303 (442)
Q Consensus 242 ----a-~~~g~~G~~--------g--~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~ 303 (442)
. ++.-++-+. + .......+ ..+..++++||||++|.+| ||+++++++++.+......+
T Consensus 179 l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~~-- 254 (367)
T PRK02731 179 FLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVA--KFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQPF-- 254 (367)
T ss_pred HHHhCCCCcEEEEECcHHHhccCcCcccHHHHHh--hcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCCC--
Confidence 1 111111110 0 00011111 1234788999999998777 99999999999887654332
Q ss_pred cCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 304 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 304 s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
+ .+++.+.++.+.++..+..++.++.++++.+++.+.|++. |+.+. ++.++++++.++... ...++++
T Consensus 255 ~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~--------~~~~~~~ 322 (367)
T PRK02731 255 N--VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK--------DAAEAYQ 322 (367)
T ss_pred C--CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC--------CHHHHHH
Confidence 2 2455555565666432222456777788888999999887 77765 456888888873211 1346777
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
. |.++||.+.++..+. .+..+|++++ +.+|+++++++|+++++
T Consensus 323 ~-L~~~gI~v~~~~~~~-----~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 323 A-LLKRGVIVRPVAGYG-----LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred H-HHHCCEEEEeCCCCC-----CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 5 445799999876542 1356999996 78999999999998764
No 129
>PRK07324 transaminase; Validated
Probab=99.86 E-value=1.2e-19 Score=179.75 Aligned_cols=306 Identities=17% Similarity=0.121 Sum_probs=201.3
Q ss_pred ECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC---CCcEEEEcchHHHH
Q 013461 106 ISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG---TPDSILYSYGLSTM 182 (442)
Q Consensus 106 ~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g---~e~~i~~~sG~~a~ 182 (442)
..|..+++|+-+.. .+..++.+ +++.+++++...+++.+ .| ..+|++.||++++ .+++++++++++++
T Consensus 23 ~~~~~~~~~~~~e~-~~~~~~~~-~~~~~~~~~~~~~Y~~~---~G----~~~lr~~ia~~~~~~~~~~vi~t~G~~~al 93 (373)
T PRK07324 23 IAESCIDSLTLEEL-LALAGKNP-EAFYQELGQKKLTYGWI---EG----SPEFKEAVASLYQNVKPENILQTNGATGAN 93 (373)
T ss_pred cccCCCCCCcHHHH-HhccCcch-HHHHHHHhcCCccCCCC---CC----CHHHHHHHHHHhcCCChhhEEEcCChHHHH
Confidence 45677888866553 34445667 88888887633333222 12 3689999999875 35677777788999
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcccc-------cc-------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADN-------KR------- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~~-------~~------- 241 (442)
..++.+++++||.|+++.++|..+...++..|++++.++.. |++++++.+...++-. +.
T Consensus 94 ~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~ 173 (373)
T PRK07324 94 FLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRA 173 (373)
T ss_pred HHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999988889999999887742 4566665553321110 00
Q ss_pred ----------ccccccccc-CCCcccc---ccC-CCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceec
Q 013461 242 ----------SNSFGVLGR-SGRGLTE---HCG-VPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVF 303 (442)
Q Consensus 242 ----------a~~~g~~G~-~g~g~~~---~~~-v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~ 303 (442)
.|+.-++-+ ...++.. ... ....+..|+++||||++|++| ||+++++++++.++........
T Consensus 174 ~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~ 253 (373)
T PRK07324 174 YLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMI 253 (373)
T ss_pred HHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEe
Confidence 222221111 1011100 000 011234688999999999877 9999999999988766433223
Q ss_pred cCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHH
Q 013461 304 SASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIA 382 (442)
Q Consensus 304 s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~ 382 (442)
+ .+++...++..+++..+. ....++.++++.+.+.+.|++.+++.+..+..+.++++.+..+. ...+++
T Consensus 254 ~--~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~--------~~~~~~ 323 (373)
T PRK07324 254 C--AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM--------PSEDFC 323 (373)
T ss_pred c--CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCC--------CHHHHH
Confidence 2 344555555556643221 23456677788888888888766676654444556677664321 133678
Q ss_pred HHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 383 DWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 383 ~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+++++++||.+.|+..+.. +..+||+++. +++.+++++++|++++++.
T Consensus 324 ~~ll~~~gv~v~pg~~F~~-----~~~iRis~~~--~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 324 LKLLKETGVLLVPGNRFDL-----EGHVRIGYCC--DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred HHHHHhcCEEEECccccCC-----CCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 8778788999999876542 3469999975 6899999999999988653
No 130
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.5e-19 Score=180.94 Aligned_cols=306 Identities=13% Similarity=0.156 Sum_probs=195.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC----C-CcEEEEcchHHHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG----T-PDSILYSYGLSTM 182 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g----~-e~~i~~~sG~~a~ 182 (442)
|.+++||++++. .+..++.+++++.+.+.+... .++. ..|..++++.+.+.+.+..| . +++++++++++++
T Consensus 31 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~--~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 31 GHKMIDLSIGNP-DMPPADFVREEMVHTANQKES--YGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcccc--CCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 567899987763 455678899998888764211 1111 12443444444444433334 2 3455566667899
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc-------cccc-------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA-------DNKR------- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~-------~~~~------- 241 (442)
..++.+++++||.|+++.++|+.+...+...|++++.++.+ |++++++.+....+ .++.
T Consensus 107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~ 186 (399)
T PRK07681 107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHED 186 (399)
T ss_pred HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHH
Confidence 99999999999999999999999999899999999888753 45566555432111 1111
Q ss_pred ----------cccccccccC--------CCccccccCCC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCC
Q 013461 242 ----------SNSFGVLGRS--------GRGLTEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 ----------a~~~g~~G~~--------g~g~~~~~~v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~ 299 (442)
.|++-++-+. +........++ ..+.+|+++||||++|++| ||+++++++++.+.....
T Consensus 187 ~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~ 266 (399)
T PRK07681 187 FFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKS 266 (399)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHh
Confidence 2222222111 10011111111 1246799999999998777 999999999998876543
Q ss_pred ceeccCCCcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 013461 300 GYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 378 (442)
Q Consensus 300 ~~~~s~s~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 378 (442)
...++ .+.+...++.++++.. +..++.++.++++.+++.+.|++. |+++..+..+.++|+.++... + .
T Consensus 267 ~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~~~~-----~---~ 335 (399)
T PRK07681 267 NTDYG--VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIPKGW-----T---S 335 (399)
T ss_pred hcccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECCCCC-----C---H
Confidence 22233 3444445555555432 122345677888899999999886 887655556778888874321 1 2
Q ss_pred HHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 379 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 379 ~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.++++.+++++||.+.++..+... .++.+||++. .+++++++++++|+++
T Consensus 336 ~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~--~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 336 LSFAYALMDRANVVVTPGHAFGPH---GEGFVRIALV--QDEEVLQQAVENIRNS 385 (399)
T ss_pred HHHHHHHHHhCCEEEeCChhhCcC---CCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 367777777679999998654311 1246999998 4789999999999883
No 131
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.2e-19 Score=179.16 Aligned_cols=290 Identities=15% Similarity=0.143 Sum_probs=194.4
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhh
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAI 186 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai 186 (442)
.++|||++|.+. ++++|.+.+++.++++..... ......++++.+|++++.+ +.++++++++++..++
T Consensus 29 ~~~i~l~~n~~~-~~~~~~v~~a~~~~~~~~~~~---------p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~ 98 (359)
T PRK03158 29 EKIVKLASNENP-YGPSPKVKEAIAAHLDELALY---------PDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMIS 98 (359)
T ss_pred CceEEecCCCCC-CCCCHHHHHHHHHHHHHhhcC---------CCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHH
Confidence 378999887543 556899999999888753211 1123478999999999853 4566666668888888
Q ss_pred hhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhcccc-------cc--------------
Q 013461 187 PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADN-------KR-------------- 241 (442)
Q Consensus 187 ~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~~~-------~~-------------- 241 (442)
.+++++||.|+++.++|..+...+...|.++..++.. |++++++.+.+.++.. +.
T Consensus 99 ~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~ 178 (359)
T PRK03158 99 RALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLE 178 (359)
T ss_pred HHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 8999999999999999999888888889988887643 5566655543321110 00
Q ss_pred c--ccccccccCCC-ccc------cc-cCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCc
Q 013461 242 S--NSFGVLGRSGR-GLT------EH-CGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLP 308 (442)
Q Consensus 242 a--~~~g~~G~~g~-g~~------~~-~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~ 308 (442)
. +++-++-+.-. .+. .. .-++..+.+++++||||++|++| ||+++++++++.++..... + ..+
T Consensus 179 ~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--~--~~~ 254 (359)
T PRK03158 179 SVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP--F--NTT 254 (359)
T ss_pred hCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--C--CCC
Confidence 1 12111111100 000 00 00011245799999999999777 9999999999988765432 2 346
Q ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHh
Q 013461 309 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKE 388 (442)
Q Consensus 309 p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~ 388 (442)
++.+.++.++++.-+..+..++.++++++++.+.|.+. |+.+. ++.+.++++.+.. + ..++++.++ +
T Consensus 255 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~-------~---~~~~~~~l~-~ 321 (359)
T PRK03158 255 RIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGR-------D---ANELFEALL-K 321 (359)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCC-------C---HHHHHHHHH-H
Confidence 66666666676532222345666777888888888876 77665 3467788877631 1 235777654 5
Q ss_pred CCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 389 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 389 ~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
+||.+.++..+.. ++.+||+++ +.+|+++++++|+++
T Consensus 322 ~gv~v~~g~~f~~-----~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 322 KGYIVRSGAALGF-----PTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred CCeEEeeCCCCCC-----CCeEEEecC---CHHHHHHHHHHHHHh
Confidence 6999999765532 356999987 899999999999875
No 132
>PRK08912 hypothetical protein; Provisional
Probab=99.86 E-value=4.1e-19 Score=177.06 Aligned_cols=310 Identities=15% Similarity=0.155 Sum_probs=197.6
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----C-cEEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e-~~i~~~sG~~a~~ 183 (442)
.+.+||+++++ ....++.+.+++.+.+... ...+....|..++.+.+.+.+.+.+|. + ++++++++++++.
T Consensus 26 ~~~i~l~~g~p-~~~~p~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 101 (387)
T PRK08912 26 HGAINLGQGFP-DDPGPEDVRRAAADALLDG---SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALA 101 (387)
T ss_pred CCeEEccCCCC-CCCCCHHHHHHHHHHHhcC---CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHH
Confidence 35799987763 3445678888888776541 111222334444444444444444452 3 5677777789999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhccc-------ccc---------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTAD-------NKR--------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~-------~~~--------- 241 (442)
.++.+++++||.|+++.++|..+...++..|++++.++.+ |.+++++.+....+. ++.
T Consensus 102 ~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~ 181 (387)
T PRK08912 102 AALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREEL 181 (387)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHH
Confidence 9999999999999999999999999999999998877642 456777665432210 000
Q ss_pred --------cccccccccC--------C---CccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCC
Q 013461 242 --------SNSFGVLGRS--------G---RGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 --------a~~~g~~G~~--------g---~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~ 299 (442)
.|++-++-+. + ..+....+. .+.+++++||||.+|..| ||+++++++++.+.....
T Consensus 182 ~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~ 259 (387)
T PRK08912 182 ALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGM--RERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQ 259 (387)
T ss_pred HHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCc--cCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHh
Confidence 2222111110 1 111111111 356899999999999777 999999999998876543
Q ss_pred ceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 013461 300 GYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 378 (442)
Q Consensus 300 ~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 378 (442)
...++. ++....++.+++...+ ...+.+++++++++++.+.|++. |+++..+..+.++|+.++..... ...
T Consensus 260 ~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~~~~~-----~~~ 331 (387)
T PRK08912 260 FLTFTT--PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAPLGLA-----EDD 331 (387)
T ss_pred hccccC--ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccccCCC-----CCH
Confidence 333333 4444444445553211 12456788899999999999887 77776544566777777431000 012
Q ss_pred HHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 379 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 379 ~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.++++.+++++||.+.++..+.... ..++.+||+++. .++++++++++|+++++
T Consensus 332 ~~~~~~l~~~~gV~v~pg~~f~~~~-~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 332 VAFCRRLVEEAGVAAIPVSAFYEED-PVTSVVRFCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred HHHHHHHHhcCCEEEecchhhCCCC-CCCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 3677776677799999987543211 113569999996 58999999999987654
No 133
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.86 E-value=8.6e-19 Score=179.24 Aligned_cols=305 Identities=13% Similarity=0.103 Sum_probs=190.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcchHHHHHhhhhhhc-cCCCEE
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGLSTMFSAIPCFC-KKGDLI 196 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~sG~~a~~~ai~a~~-~~gd~V 196 (442)
..+++++.+.++..+.... .|+......+|++.||+++ | .+++++++++++++..++.+++ ++||.|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~----~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~V 166 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTG----AYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGV 166 (481)
T ss_pred HHHHHHHHHHHHhCCCccc----CcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEE
Confidence 4678888777766432222 2333334456666666664 3 2456667777799999999998 799999
Q ss_pred EeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc---cccc-------------------------
Q 013461 197 VADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA---DNKR------------------------- 241 (442)
Q Consensus 197 i~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~---~~~~------------------------- 241 (442)
+++.++|..+...++..|++++.++.+ |+++|++.++.... +.+.
T Consensus 167 lv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~ 246 (481)
T PTZ00377 167 MIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKF 246 (481)
T ss_pred EECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHH
Confidence 999999999999999999998887632 56888888764211 1110
Q ss_pred --cccccccccCCC---------c---cccc-cCCCCC----ceeEEEEeccccc-cCCC---cEEEc---CHHhHHHHH
Q 013461 242 --SNSFGVLGRSGR---------G---LTEH-CGVPVD----KIDIVTAAMGHAL-ATEG---GFCTG---SARVVDHQR 295 (442)
Q Consensus 242 --a~~~g~~G~~g~---------g---~~~~-~~v~~~----~~diii~S~sK~l-g~~G---G~v~g---~~~~i~~l~ 295 (442)
.|++-++-+.-. . +... .++.++ ...|+++||||++ |++| ||+++ ++++++.+.
T Consensus 247 a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~ 326 (481)
T PTZ00377 247 CYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIY 326 (481)
T ss_pred HHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHH
Confidence 233222211100 0 0000 011111 1358899999984 6555 99885 899998887
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHH-----------HhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDV-----------LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 364 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~-----------l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~ 364 (442)
..... .. +.+++...++.++++. .++...+++.++++++.+.+.|++++|+.+..+..+.++|+.+
T Consensus 327 ~~~~~-~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~ 403 (481)
T PTZ00377 327 KLASI-NL--CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRI 403 (481)
T ss_pred HHhhe-ec--CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeec
Confidence 64422 21 2355555555566631 1122233445788899999999888788887554556666555
Q ss_pred cCCCCCchhh----HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 365 EKSTGSMKND----LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 365 ~~~~~~~~~~----~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
..+....... ......++..+++++||.+.|+..+..... +..+|+++. .+++++++++++|++++++.++|
T Consensus 404 ~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~--~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 404 ELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPG--TYHFRITIL--PPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred cCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCC--CCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 3211100000 000123555677788999999877642111 246999998 57899999999999999998876
Q ss_pred c
Q 013461 441 R 441 (442)
Q Consensus 441 ~ 441 (442)
.
T Consensus 480 ~ 480 (481)
T PTZ00377 480 Y 480 (481)
T ss_pred h
Confidence 4
No 134
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.86 E-value=2.4e-19 Score=177.00 Aligned_cols=298 Identities=14% Similarity=0.113 Sum_probs=188.7
Q ss_pred hHHHHHHHHHHHhcCCCCCccCcccc-----CcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCC
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYG-----TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADE 200 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g-----~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~ 200 (442)
..+.+++.+++.+||.++++|+...+ ..+.+.++++++|+++|.++++++++|++++..++.+++++||.|+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~ 90 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDG 90 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Confidence 45677777888888877776654222 3367889999999999998889888999999999999999999999999
Q ss_pred CchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhc----ccccc------------------------cccc
Q 013461 201 GVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVT----ADNKR------------------------SNSF 245 (442)
Q Consensus 201 ~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~----~~~~~------------------------a~~~ 245 (442)
+.|.+...+++..|++++.++. .|++++++.+++.. ++.+. .++.
T Consensus 91 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~ 170 (361)
T cd06452 91 LAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGV 170 (361)
T ss_pred CcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCC
Confidence 9999998888889999988763 26788888776421 11111 1111
Q ss_pred ccccc--CCCccccccCCCCCceeEEEEeccccccCC--CcEEEcCHHhHHHHHhhCCce------eccCCCcHHHHHHH
Q 013461 246 GVLGR--SGRGLTEHCGVPVDKIDIVTAAMGHALATE--GGFCTGSARVVDHQRLSSSGY------VFSASLPPYLASAA 315 (442)
Q Consensus 246 g~~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~--GG~v~g~~~~i~~l~~~~~~~------~~s~s~~p~~aaaa 315 (442)
-++-+ .+.|..+ +.....++|++++|++|+++++ +||+++++++++.++....++ ...++.++..++++
T Consensus 171 ~vivD~a~~~g~~~-~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
T cd06452 171 PLLLNGAYTVGRMP-VSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTL 249 (361)
T ss_pred eEEEECCcccCCcC-CCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHH
Confidence 11111 1111111 1111124789999999999743 489999999999886543221 11122222233344
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 013461 316 ITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS--NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 316 ~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v 393 (442)
.++++...+.-+...+..++.+++++.|++++|+++.. +...+++.+.................++.+. |.++||.+
T Consensus 250 ~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-L~~~gI~~ 328 (361)
T cd06452 250 MASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSE-LKKRGIHG 328 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHH-HHHcCceE
Confidence 45565443222234444556689999999988888763 2345676666531000000000011246665 45569985
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
.. +.. ...+|++. ..+|++|++.++++|+++.
T Consensus 329 ~~---~~~-----~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 329 IK---PGL-----TRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred Ec---CCC-----ceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 32 111 12378888 3479999999999998653
No 135
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3e-19 Score=178.72 Aligned_cols=310 Identities=17% Similarity=0.202 Sum_probs=193.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC-----CcEEEEcch
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT-----PDSILYSYG 178 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~-----e~~i~~~sG 178 (442)
|++++||++++. .+..+|.+.+++.+.+.... ..++. ..|. .+|++.+|+++ |. ++.|+.++|
T Consensus 43 ~~~~i~L~~g~p-~~~~~~~~~~~l~~~~~~~~--~~~Y~-~~G~----~~lr~aia~~~~~~~g~~~~~~~~~I~it~G 114 (410)
T PRK06290 43 DMELIDMGVGEP-DEMADESVVEVLCEEAKKPE--NRGYA-DNGI----QEFKEAAARYMEKVFGVKDIDPVTEVIHSIG 114 (410)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhCCC--CCCCC-CCCc----HHHHHHHHHHHHHHcCCCcCCCcceEEEccC
Confidence 567899988763 45567888888887664311 11111 1234 45555566553 42 234555555
Q ss_pred -HHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhc-------ccccc--
Q 013461 179 -LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVT-------ADNKR-- 241 (442)
Q Consensus 179 -~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~-------~~~~~-- 241 (442)
.+++..++.+++++||.|+++.++|..+...++..|++++.++.+ |++++++.+.... +.++.
T Consensus 115 s~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~ 194 (410)
T PRK06290 115 SKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGA 194 (410)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCc
Confidence 588989999999999999999999999888899999999888742 4556655554311 11111
Q ss_pred ---------------cccccccccC--------CCccccccCCC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHH
Q 013461 242 ---------------SNSFGVLGRS--------GRGLTEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 294 (442)
Q Consensus 242 ---------------a~~~g~~G~~--------g~g~~~~~~v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l 294 (442)
.|++-++-+. +... ....+. ..+.+|+++||||++|++| ||+++++++++.+
T Consensus 195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~-s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l 273 (410)
T PRK06290 195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPL-SFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAF 273 (410)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCc-ChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHH
Confidence 2222221111 1110 111111 1356799999999999888 9999999999988
Q ss_pred HhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 295 RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 295 ~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
......+..+ .+.+...++.++++..+..+..+++++++++++.+.|++. |+.+..+..+.++|+.++..... ...
T Consensus 274 ~~~~~~~~~~--~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~lp~~~~~-~~~ 349 (410)
T PRK06290 274 ATVKDNNDSG--QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKAPKGTKS-GIK 349 (410)
T ss_pred HHHHhccccC--CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEECCCcccc-CCC
Confidence 7654332222 2333444455555432223457788899999999999886 88766444455556676432100 000
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecC-CCCHHHHHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSA-AHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~-~~t~eei~~~i~~l~~~~~~~ 437 (442)
.....++++.++++.++.+.++..+ ...+||+++. ..++++.++++++|++.+..+
T Consensus 350 ~~~~~~~~~~Ll~~~~v~~~p~~~~-------~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 350 FENAEEFSQYLIKEKLISTVPWDDA-------GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCHHHHHHHHHHhCCEEEECCccc-------cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 0013467887777766766664332 2459999973 458899999999999988764
No 136
>PRK08960 hypothetical protein; Provisional
Probab=99.86 E-value=2.8e-19 Score=178.16 Aligned_cols=304 Identities=14% Similarity=0.097 Sum_probs=195.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcchH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGL 179 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~sG~ 179 (442)
|.++++|..+.. ++..++.+.+++.+.++.....++. ..| ..++++.+|+++ | .++++++++++
T Consensus 31 ~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~Y~~---~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 102 (387)
T PRK08960 31 GHDVIHLEIGEP-DFTTAEPIVAAGQAALAAGHTRYTA---ARG----LPALREAIAGFYAQRYGVDVDPERILVTPGGS 102 (387)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCccCC---CCC----CHHHHHHHHHHHHHHhCCCCChhhEEEccCcH
Confidence 456789877664 4556789999999988742122211 223 356666666665 3 34667777778
Q ss_pred HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhccc-------ccc----
Q 013461 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTAD-------NKR---- 241 (442)
Q Consensus 180 ~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~-------~~~---- 241 (442)
+++..++.+++++||.|+++++.|+.....+...|.+++.++. .|++++++.+++.+.. ++.
T Consensus 103 ~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~ 182 (387)
T PRK08960 103 GALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLL 182 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCc
Confidence 9999999999999999999999999998888888988877653 1466776665543221 110
Q ss_pred -------------cccccccccC-CCcc------ccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhC
Q 013461 242 -------------SNSFGVLGRS-GRGL------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 -------------a~~~g~~G~~-g~g~------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~ 298 (442)
.|++-++-+. ...+ .....+ ++..|+++||||.+|.+| ||+++++++++.++...
T Consensus 183 ~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~ 260 (387)
T PRK08960 183 SRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV--DDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLA 260 (387)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc--cCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHH
Confidence 2232222111 1111 011122 234689999999998776 99999999998876543
Q ss_pred CceeccCCCcHHHHHHHHHHHHH-H-hcChHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEEEecCCCCCchhhH
Q 013461 299 SGYVFSASLPPYLASAAITAIDV-L-EENPDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFLILEKSTGSMKNDL 375 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~-l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 375 (442)
..+.. +.+.+.+.++.++++. . +...+.++.++++++.+.+.|++. |+.+. .+..+.++|+.++... .+
T Consensus 261 ~~~~~--~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~~----~~- 332 (387)
T PRK08960 261 QNLYI--SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISAFG----GD- 332 (387)
T ss_pred hhhcc--CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEeccccC----CC-
Confidence 33222 2355555555555532 1 122346778888899999999886 76542 2345566677764210 01
Q ss_pred HHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 376 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 376 ~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
..++++.+++++||.+.++..+..+. .+..+|++++. +.+++++++++|++++.
T Consensus 333 --~~~~~~~ll~~~gi~v~pg~~f~~~~--~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 333 --AFAFCRHFLETEHVAFTPGLDFGRHQ--AGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred --HHHHHHHHHHhCCEEEcCchHhCCCC--CCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 23677766777899999986654211 12469999995 67888888888877653
No 137
>PRK09148 aminotransferase; Validated
Probab=99.86 E-value=6.2e-19 Score=176.60 Aligned_cols=315 Identities=12% Similarity=0.125 Sum_probs=197.4
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----C-cEEEEcchHHH
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLST 181 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e-~~i~~~sG~~a 181 (442)
.|+++|||+.++. .+..++.+.+++.+.++.- ....+....|..++++.+.+.+.+.+|. + +++++++++++
T Consensus 28 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGNP-DLPTPQHIVDKLCETAQDP--RTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCCC-CCCCCHHHHHHHHHHHcCc--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 3677899987653 4555678888888776431 1111122234434444444444333352 3 45666666799
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhcccccc----------------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKR---------------- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~~~~~---------------- 241 (442)
+..++.+++++||.|+++.++|+.+...+...|++++.++.. +++++++.++...++.+.
T Consensus 105 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~ 184 (405)
T PRK09148 105 FANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADL 184 (405)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCH
Confidence 999999999999999999999999888888899999887642 345677766543222111
Q ss_pred -----------cccccccccCCCc--------cccccCCC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhC
Q 013461 242 -----------SNSFGVLGRSGRG--------LTEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 -----------a~~~g~~G~~g~g--------~~~~~~v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~ 298 (442)
.|++-++-+.-.+ ......++ ..+..|+++||||++|++| ||+++++++++.+....
T Consensus 185 ~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~ 264 (405)
T PRK09148 185 DFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVK 264 (405)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHH
Confidence 2222222111000 00011111 1245678999999999777 99999999999886543
Q ss_pred CceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 013461 299 SGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 377 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 377 (442)
....++ .+++...++.++++..+ ..+..++.++++++++.+.|.+. ++.+..+..+.++|+.++...... .
T Consensus 265 ~~~~~~--~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~~~~-----~ 336 (405)
T PRK09148 265 SYLDYG--AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIPEAFRHL-----G 336 (405)
T ss_pred HHhccC--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECCCccCCC-----C
Confidence 221222 23444455555554211 12456778899999999999886 776654456667888774321100 1
Q ss_pred HHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 378 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 378 ~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..++++.+++++||.+.++..+... .+..+||++. .+++++++++++|.+++.+.
T Consensus 337 ~~~~~~~ll~~~gV~v~pg~~f~~~---~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 337 SLEFSKLLVEKADVAVAPGVGFGEH---GDGYVRIALV--ENEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 2356776676779999998765321 1346999997 47899999999999887643
No 138
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.86 E-value=7.1e-19 Score=175.33 Aligned_cols=313 Identities=10% Similarity=0.101 Sum_probs=202.9
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----Cc-EEEEcchHHHHHh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PD-SILYSYGLSTMFS 184 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e~-~i~~~sG~~a~~~ 184 (442)
.+++|+.+.. .+..++.+.+++.+.+..... ..+....|..+++..+++.+++++|. ++ .++++++++++..
T Consensus 28 ~~~~l~~g~~-~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGVV-SYPPPPEAIEALNNFLANPEN--HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 4688876543 355678899998887764321 22333467788899999999999884 33 4445555688888
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccc-------cc-----------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADN-------KR----------- 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~-------~~----------- 241 (442)
++.+++++||.|+++.++|......++..|.+++.++.+ |++++++.++..++.. +.
T Consensus 105 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~ 184 (389)
T PRK05957 105 AILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRA 184 (389)
T ss_pred HHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHH
Confidence 888889999999999999888777778889998887643 5677777664322110 00
Q ss_pred ------cccccccccC--------CCccccccCC-CCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceec
Q 013461 242 ------SNSFGVLGRS--------GRGLTEHCGV-PVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVF 303 (442)
Q Consensus 242 ------a~~~g~~G~~--------g~g~~~~~~v-~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~ 303 (442)
.+++-++-+. +......... +..+..|++.||||.+|.+| ||+++++++++.+......+..
T Consensus 185 i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~ 264 (389)
T PRK05957 185 VNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILI 264 (389)
T ss_pred HHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhccc
Confidence 1121111111 0000000111 11235789999999999877 9999999999988765432222
Q ss_pred cCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCc-eeecCCCCCEEEEEecCCCCCchhhHHHHHHH
Q 013461 304 SASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGL-SIASNPESPIVFLILEKSTGSMKNDLQLLEDI 381 (442)
Q Consensus 304 s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i 381 (442)
+.+.+...++..+++.-. ...+.+++++++++.+.+.|++++++ .+..+..+.++|+.+.... + ..++
T Consensus 265 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~-----~---~~~~ 334 (389)
T PRK05957 265 --CPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDL-----N---DFEL 334 (389)
T ss_pred --CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCC-----C---hHHH
Confidence 234344444455553211 12345677888999999999877553 5443334566777764321 1 2367
Q ss_pred HHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 382 ADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 382 ~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
++.+++++||.+.++..+..+. ...+||+++. .+++++++++++|.+.+++.++
T Consensus 335 ~~~l~~~~gv~v~pg~~f~~~~---~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 335 VKQLIREYRVAVIPGTTFGMKN---GCYLRIAYGA-LQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred HHHHHHHCCEEEccchhhCCCC---CCEEEEEEec-CCHHHHHHHHHHHHHHHHhhhc
Confidence 7776766799999987653211 2469999975 4789999999999999887764
No 139
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.85 E-value=7e-19 Score=175.11 Aligned_cols=302 Identities=16% Similarity=0.211 Sum_probs=193.2
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcchHHH
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGLST 181 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~sG~~a 181 (442)
+++||+.++. .+..++++.+++.+.+...- . .|+......+|++.+|+++ | .++++++++++++
T Consensus 30 ~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~---~----~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~a 101 (384)
T PRK06348 30 DIIDLSLGDP-DLITDESIINAAFEDAKKGH---T----RYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHG 101 (384)
T ss_pred CcEEcCCCCC-CCCCCHHHHHHHHHHHhcCC---C----CCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHH
Confidence 4789977653 45556788777666554311 1 1222222345666666655 3 3466777777899
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhccc-------ccc------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTAD-------NKR------ 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~-------~~~------ 241 (442)
+..++.+++++||.|+++.++|..+...+...|++++.++. .|++++++.++...+. ++.
T Consensus 102 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~ 181 (384)
T PRK06348 102 MYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSK 181 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCH
Confidence 99999999999999999999999999999999998887753 2567777766432211 000
Q ss_pred -----------cccccccccCCC-cc------ccccCCC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCC
Q 013461 242 -----------SNSFGVLGRSGR-GL------TEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 -----------a~~~g~~G~~g~-g~------~~~~~v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~ 299 (442)
.+++-++-+.-. .+ .....+. ..+..|+++||||++|++| ||+++++++++.++....
T Consensus 182 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~ 261 (384)
T PRK06348 182 ETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINE 261 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHH
Confidence 122211111100 00 0001111 1346799999999998766 999999999988765543
Q ss_pred ceeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 013461 300 GYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 378 (442)
Q Consensus 300 ~~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 378 (442)
...++ .+++...++..+++..++ .+.+++.++++.+++.+.|.+++++++..+..+.++|+.++.... + .
T Consensus 262 ~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~----~---~ 332 (384)
T PRK06348 262 GICFS--APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGL----S---S 332 (384)
T ss_pred hccCC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCC----C---H
Confidence 33333 355555556566653222 235677888888999999988767666544344566777642110 1 2
Q ss_pred HHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 379 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 379 ~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.++++.++++.||.+.++..+... .+..+||+++ .+++++++++++|+++
T Consensus 333 ~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 333 VEFCEKLLKEAHVLVIPGKAFGES---GEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHhCCEEEcCchhhccC---CCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 357777677779999988765321 1356999996 4889999999998764
No 140
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.85 E-value=6.1e-19 Score=175.85 Aligned_cols=306 Identities=14% Similarity=0.148 Sum_probs=192.2
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C--C--C-cEEEEcc
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G--T--P-DSILYSY 177 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g--~--e-~~i~~~s 177 (442)
+|+++|||+.++. .+..++.+.+++.+.+.+... .++....|. .+|++.+|+++ | . + +++++++
T Consensus 28 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (388)
T PRK07366 28 AGKELIDLSLGSS-DLPAPAHALEAIAQSLHDPST--HGYLLFHGT----LDFREAAAQWYEQRFGLAVDPETEVLPLIG 100 (388)
T ss_pred cCCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCccc--CCCCCCCCC----HHHHHHHHHHHHHhhCCcCCCcCeEEECCC
Confidence 4678899987753 455678999999888764211 111112233 45666666655 4 2 3 2444555
Q ss_pred hHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc-------cccc--
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA-------DNKR-- 241 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~-------~~~~-- 241 (442)
+.+++..++.+++++||.|+++.++|..+...++..|++++.++.+ |.+++++.+....+ .++.
T Consensus 101 s~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~ 180 (388)
T PRK07366 101 SQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTA 180 (388)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCc
Confidence 5689999999999999999999999999999999999999887653 23344333322111 1111
Q ss_pred ---------------cccccccccCCC------c---cccccCCCCC-ceeEEEEeccccccCCC---cEEEcCHHhHHH
Q 013461 242 ---------------SNSFGVLGRSGR------G---LTEHCGVPVD-KIDIVTAAMGHALATEG---GFCTGSARVVDH 293 (442)
Q Consensus 242 ---------------a~~~g~~G~~g~------g---~~~~~~v~~~-~~diii~S~sK~lg~~G---G~v~g~~~~i~~ 293 (442)
.|++-++-+.-. + .......++. +..|+++||||++|++| ||+++++++++.
T Consensus 181 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~ 260 (388)
T PRK07366 181 IAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQA 260 (388)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHH
Confidence 223222211100 0 0011112111 34688999999998776 999999999998
Q ss_pred HHhhCCceeccCCCcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch
Q 013461 294 QRLSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK 372 (442)
Q Consensus 294 l~~~~~~~~~s~s~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 372 (442)
+......+.++. ++....++.+++... +..++.++.++++++++.+.|++. |+.+..+..+.++|+.++....
T Consensus 261 l~~~~~~~~~~~--~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~~~~~--- 334 (388)
T PRK07366 261 LRQVKAVVDFNQ--YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKLPEPWQ--- 334 (388)
T ss_pred HHHHHhhcccCC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCcccC---
Confidence 876543333322 222233344555321 122457788899999999999886 7765545567788887743210
Q ss_pred hhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 373 NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 373 ~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.+ ..++++.+++++||.+.++..+... .+..+||+++. +++++++++++|+++
T Consensus 335 ~~---~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 335 GN---SVEFCTQLVAQTGVAASPGSGFGKS---GEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CC---HHHHHHHHHHhCCEEEeCchHhCcC---CCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 01 2356766667789999998654311 12469999974 689999999999875
No 141
>PRK10534 L-threonine aldolase; Provisional
Probab=99.85 E-value=8.2e-20 Score=178.37 Aligned_cols=288 Identities=14% Similarity=0.186 Sum_probs=185.2
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhc
Q 013461 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC 190 (442)
Q Consensus 111 ~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~ 190 (442)
+|||+||...+ .+|.+++++.+..... ..|+..+.+.+|++.||+++|.+.++++++|++++..++.+++
T Consensus 1 ~~~~~~~~~~~--p~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVTR--PSRAMLEAMMAAPVGD--------DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCCC--CCHHHHHHHHhccCCC--------cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc
Confidence 47999986556 5799999987644321 2355567789999999999999999999999999998888889
Q ss_pred cCCCEEEeCCCchHHHHHH--HHhc-CCeEEEecCC-----CHHHHHHHHHhhc---ccccc------------------
Q 013461 191 KKGDLIVADEGVHWGIQNG--LYLS-RSTVVYFKHN-----DMDSLRNTLERVT---ADNKR------------------ 241 (442)
Q Consensus 191 ~~gd~Vi~~~~~h~s~~~~--~~l~-g~~v~~~~~~-----d~~~Le~~l~~~~---~~~~~------------------ 241 (442)
++||.|+++.++|.....+ .... +++++.++.+ |+++|++.+.+.. ...+.
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~~~l~ 150 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPREYLK 150 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCCCCeecCHHHHH
Confidence 9999999988888644321 2333 3566666432 5777776664310 01110
Q ss_pred -------cccccccccCCCcccc--ccCCC----CCceeEEEEeccccccCC-CcEEEcCHHhHHHHHhhCCceeccCCC
Q 013461 242 -------SNSFGVLGRSGRGLTE--HCGVP----VDKIDIVTAAMGHALATE-GGFCTGSARVVDHQRLSSSGYVFSASL 307 (442)
Q Consensus 242 -------a~~~g~~G~~g~g~~~--~~~v~----~~~~diii~S~sK~lg~~-GG~v~g~~~~i~~l~~~~~~~~~s~s~ 307 (442)
.|+.-++-+....... ..+.. ....|.++.||||++|+. |||+++++++++.++.....+.+..+.
T Consensus 151 ~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~~~~ 230 (333)
T PRK10534 151 QAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRARRWRKMTGGGMRQ 230 (333)
T ss_pred HHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHHHHHHHHHHHHHhCCchhh
Confidence 1121111110000000 00110 011255566899999874 558999999999887543322222222
Q ss_pred cHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 308 PPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 308 ~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
+..+++++.++++.. .+.+++.+++++++.+.|+++ |+++.. ++++++++.++.. ...++.+ .|+
T Consensus 231 ~~~~~a~~~~~l~~~---~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~~nfv~~~~~~~---------~~~~~~~-~l~ 295 (333)
T PRK10534 231 AGILAAAGLYALKHN---VARLQEDHDNAAWLAEQLREA-GADVMR-QDTNMLFVRVGEE---------QAAALGE-YMR 295 (333)
T ss_pred HHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhC-CCccCC-CCceEEEEECCch---------hHHHHHH-HHH
Confidence 344555566666432 234455556778999999987 888764 4788888877420 1235554 577
Q ss_pred hCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 388 ~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
++||.++++. .+|++.+..+|++|+++++++|++++
T Consensus 296 ~~gi~v~~~~-----------~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 296 ERNVLINASP-----------IVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred HcCeeecCCc-----------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 7799997652 28998887789999999999998765
No 142
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.85 E-value=5.8e-19 Score=176.81 Aligned_cols=313 Identities=12% Similarity=0.098 Sum_probs=201.1
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCC-CccCccccCcHHHHHHHHHHHhhhCC-C--cEEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKY-GVGS-CGPRGFYGTIDVHLDCEARIAKFLGT-P--DSILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~-g~~~-~~~~~~~g~~~~~~~le~~lA~~~g~-e--~~i~~~sG~~a~~ 183 (442)
.-|+|-++... .++.+.+++.+.++.+ +... ..+.......+..+++++.+|+++|. + ++++++++++++.
T Consensus 20 ~~yld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~ 95 (401)
T PRK10874 20 GVYLDSAATAL----KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESIN 95 (401)
T ss_pred eEEEeCCcccC----CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHH
Confidence 34666554432 3578999999988763 2211 11111122356778999999999997 3 3555666679988
Q ss_pred hhhhhh----ccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc---------
Q 013461 184 SAIPCF----CKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR--------- 241 (442)
Q Consensus 184 ~ai~a~----~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~--------- 241 (442)
.++.++ .++||.|++.++.|++.. ..++..|++++.++.+ |++++++.+.+.+.-...
T Consensus 96 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~ 175 (401)
T PRK10874 96 LVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGG 175 (401)
T ss_pred HHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccC
Confidence 888887 379999999999997742 3346678888877642 567777776543221100
Q ss_pred ----------cccccc--ccc--CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhC--------
Q 013461 242 ----------SNSFGV--LGR--SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSS-------- 298 (442)
Q Consensus 242 ----------a~~~g~--~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~-------- 298 (442)
++..|+ +-+ .+.|.. ..++...++|+++.|++|.+|..| ||+++++++++.+....
T Consensus 176 ~~~~~~i~~l~~~~g~~~ivD~a~~~g~~-~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~ 254 (401)
T PRK10874 176 CPDLARAITLAHQAGMVVMVDGAQGAVHF-PADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWQGGGKMLTE 254 (401)
T ss_pred cCCHHHHHHHHHHcCCEEEEECCcccccc-cCCchhcCCCEEEEecccccCCCccEEEEEchHHHhcCCCeecCCcceEe
Confidence 222221 111 111111 122323357999999999888766 99999999887654211
Q ss_pred ----------CceeccC-CCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 013461 299 ----------SGYVFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 365 (442)
Q Consensus 299 ----------~~~~~s~-s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~ 365 (442)
.++.|.. +.+....++..++++.+.+. ....++.+++++++.+.|++++|+.+..++.++++.+.+.
T Consensus 255 ~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~ 334 (401)
T PRK10874 255 VSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFA 334 (401)
T ss_pred eccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEEC
Confidence 1122322 23334555566777776532 3456777888999999998888888776567778887763
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccc---cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 366 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~---~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.. + ..++.+ .|+++||.++++..+... ....+..+|+|++..+|++|+++++++|+++++.
T Consensus 335 ~~------~---~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 335 GV------H---HSDLVT-LLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred Cc------C---HHHHHH-HHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 21 1 235665 466679999987654210 0011245999999999999999999999988764
No 143
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=6.3e-19 Score=174.28 Aligned_cols=301 Identities=19% Similarity=0.191 Sum_probs=205.1
Q ss_pred CChHHHHHHHHHHHhcCC--CCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEc-chHHHHHhhhhhh---ccCCCE
Q 013461 124 GHEKLLESCTSALEKYGV--GSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYS-YGLSTMFSAIPCF---CKKGDL 195 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~g~--~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~-sG~~a~~~ai~a~---~~~gd~ 195 (442)
.+..|.+++.+..++|.. +...+....-..+..++.++.+|+|+|.+ +.|+|+ +.++++..+..++ .++||+
T Consensus 34 ~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gde 113 (405)
T COG0520 34 KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDE 113 (405)
T ss_pred CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCE
Confidence 367899999999887542 22233333334668899999999999955 445555 5568888888877 699999
Q ss_pred EEeCCCchHHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc-------------------cccccc
Q 013461 196 IVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR-------------------SNSFGV 247 (442)
Q Consensus 196 Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~-------------------a~~~g~ 247 (442)
|++.+..|.+.. ...+..|+++++++.+ ++++++.++.+.++-... +|..|.
T Consensus 114 Iv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga 193 (405)
T COG0520 114 IVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGA 193 (405)
T ss_pred EEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCC
Confidence 999999998743 3344458889888853 466777655544332211 333332
Q ss_pred --cccCCCcccccc--CCCCCceeEEEEeccccc-cCCC-cEEEcCHHhHHHHHhhC-------------------Ccee
Q 013461 248 --LGRSGRGLTEHC--GVPVDKIDIVTAAMGHAL-ATEG-GFCTGSARVVDHQRLSS-------------------SGYV 302 (442)
Q Consensus 248 --~G~~g~g~~~~~--~v~~~~~diii~S~sK~l-g~~G-G~v~g~~~~i~~l~~~~-------------------~~~~ 302 (442)
+- ++.....|. +++..++|++..|-+|.+ |..| |++++++++.+.+.+.. .+..
T Consensus 194 ~v~V-Daaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~r 272 (405)
T COG0520 194 LVLV-DAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLR 272 (405)
T ss_pred EEEE-ECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchh
Confidence 11 122222333 444457899999999955 6556 99999999998873321 1122
Q ss_pred ccCCCcHHHHH-HHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecCC---CCCEEEEEecCCCCCchhhHH
Q 013461 303 FSASLPPYLAS-AAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNP---ESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 303 ~s~s~~p~~aa-aa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~---~~~i~~~~~~~~~~~~~~~~~ 376 (442)
|.++.|.+..+ +..++++++++. ..+.++.+++.+++.+.|++++++++.+++ ..+++.+.+...
T Consensus 273 fe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~--------- 343 (405)
T COG0520 273 FEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI--------- 343 (405)
T ss_pred hccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC---------
Confidence 33333444433 344788888753 467888899999999999999999998764 588999988542
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccc---cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~---~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
...+++. .|.++||.++.+..+..+ ....+..+|+|++..+|+||||+++++|+++.+
T Consensus 344 ~~~dv~~-~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 344 HPHDVAT-LLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CHHHHHH-HHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 1235776 467779999988765421 122234599999999999999999999998753
No 144
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.85 E-value=1.1e-18 Score=174.52 Aligned_cols=313 Identities=13% Similarity=0.085 Sum_probs=201.1
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCC-CccCccccCcHHHHHHHHHHHhhhCCC---cEEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKY-GVGS-CGPRGFYGTIDVHLDCEARIAKFLGTP---DSILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~-g~~~-~~~~~~~g~~~~~~~le~~lA~~~g~e---~~i~~~sG~~a~~ 183 (442)
.-|+|-++... .++.+++++.+.++.+ +... ..+....-..+..+++++.+|+++|.+ ++++++++++++.
T Consensus 17 ~iyld~a~~~~----~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~ 92 (398)
T TIGR03392 17 TVYLDSAATAL----KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESIN 92 (398)
T ss_pred eEEeeCccccC----CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHH
Confidence 45677655432 3578999999988653 2211 111111112356678999999999963 4566667779998
Q ss_pred hhhhhh----ccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc---------
Q 013461 184 SAIPCF----CKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR--------- 241 (442)
Q Consensus 184 ~ai~a~----~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~--------- 241 (442)
.++.++ .++||.|++.++.|++.. ..++..|++++.++.+ |++++++.+.+.+.-...
T Consensus 93 ~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~ 172 (398)
T TIGR03392 93 LVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGG 172 (398)
T ss_pred HHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccc
Confidence 888877 478999999999998742 3346678998888753 567777777543321110
Q ss_pred ------------ccccccccc--CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCC-------
Q 013461 242 ------------SNSFGVLGR--SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSS------- 299 (442)
Q Consensus 242 ------------a~~~g~~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~------- 299 (442)
.|+.-++-+ .+.|.. ..++...++|+++.|.+|.+|..| ||+++++++++.+.....
T Consensus 173 ~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T TIGR03392 173 CPDLARAITLAHQYGAVVVVDGAQGVVHG-PPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLEAMPPWQGGGKMLSH 251 (398)
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhhcCCC-CCChhhcCCCEEEEecccccCCCceEEEEEcHHHHhhCCCeecCCceEee
Confidence 222212211 111111 122222357899999999888766 999999998876642210
Q ss_pred -----------ceeccC-CCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 013461 300 -----------GYVFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 365 (442)
Q Consensus 300 -----------~~~~s~-s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~ 365 (442)
++.|.. +.+....+++.++++.+++. ..+.++.+++.+++.+.|++++|+++...+.++++.+.+.
T Consensus 252 ~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~ 331 (398)
T TIGR03392 252 VSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFA 331 (398)
T ss_pred ccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeC
Confidence 012222 33334555566788876542 3566788888999999998888888775556778877763
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccc---cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 366 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~---~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.. + ..++.+. |+++||.++.+..+... ....+..||+|++..+|++|+++++++|++++++
T Consensus 332 ~~------~---~~~l~~~-L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 332 GV------H---HSDLAAL-LAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred Cc------C---HHHHHHH-HHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 21 1 2356664 66779999987643210 0001346999999999999999999999988764
No 145
>PRK07777 aminotransferase; Validated
Probab=99.85 E-value=8.3e-19 Score=174.84 Aligned_cols=308 Identities=15% Similarity=0.129 Sum_probs=191.5
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----C-cEEEEcchHHHHHh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLSTMFS 184 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e-~~i~~~sG~~a~~~ 184 (442)
+++||+.+. +....++.+.+++.+.+... . ..+....|..++.+.+.+.+.+.+|. + +++++++|++++..
T Consensus 25 ~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~-~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 100 (387)
T PRK07777 25 GAVNLGQGF-PDEDGPPEMLEAAQEAIAGG-V--NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAA 100 (387)
T ss_pred CeEEccCCC-CCCCCCHHHHHHHHHHHhcC-C--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 579987765 34444567788877777541 1 11112234444444444444444563 2 47777778899999
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhcccc-------cc--------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--------NDMDSLRNTLERVTADN-------KR-------- 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~--------~d~~~Le~~l~~~~~~~-------~~-------- 241 (442)
++.+++++||.|++..++|..+...+...|.+++.++. .|++++++.+.+..+.. +.
T Consensus 101 ~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 180 (387)
T PRK07777 101 AVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAE 180 (387)
T ss_pred HHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHH
Confidence 99999999999999999999998888888988877653 25566766654322110 00
Q ss_pred ---------cccccccccC-----------CCccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhC
Q 013461 242 ---------SNSFGVLGRS-----------GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 ---------a~~~g~~G~~-----------g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~ 298 (442)
.|++-++-+. ...+....+ ..+.+|+++||||++|++| ||+++++++++.+....
T Consensus 181 ~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~ 258 (387)
T PRK07777 181 LAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG--MRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAK 258 (387)
T ss_pred HHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCC--CcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHH
Confidence 1221111110 011111111 1346899999999999777 99999999998877554
Q ss_pred CceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 013461 299 SGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 377 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 377 (442)
....++. .++.+ .++..++...+ ....+++.++++++++.+.|++. ++++..+..+.++|+.++.. +. . .
T Consensus 259 ~~~~~~~-~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~-~~--~---~ 329 (387)
T PRK07777 259 QYLTYVG-GAPFQ-PAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRPL-GY--D---D 329 (387)
T ss_pred hhcccCC-CCHHH-HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEeccccc-CC--C---C
Confidence 3222322 23333 23334443211 12456788999999999999886 77766544455666665321 10 0 1
Q ss_pred HHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 378 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 378 ~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
..++++.+++++||.|.++..+.......+..+||+++. +++++++++++|+++.
T Consensus 330 ~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 330 GTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRALR 384 (387)
T ss_pred HHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 346788776677999999875432111113469999975 7899999999998764
No 146
>PLN02721 threonine aldolase
Probab=99.85 E-value=2.1e-19 Score=176.80 Aligned_cols=297 Identities=18% Similarity=0.251 Sum_probs=189.8
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF 189 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~ 189 (442)
+++||+++... . ++|.+++++.+. .-+.. .++..+...+||+.+|+++|.+..+++++|++++..++.++
T Consensus 6 ~~~~~~~~~~~-~-~~~~~~~a~~~~--~~~~~------~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 6 RVVDLRSDTVT-K-PTDAMRAAMANA--EVDDD------VLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhhccccc-C-CCHHHHHHHHhc--cCCCc------ccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHH
Confidence 57899888654 2 578888887653 11111 11223447899999999999998999999999988888888
Q ss_pred cc-CCCEEEeCCCchHHHHH---HHHhcCCeEEEecCC-----CHHHHHHHHHhhc----ccccc---------------
Q 013461 190 CK-KGDLIVADEGVHWGIQN---GLYLSRSTVVYFKHN-----DMDSLRNTLERVT----ADNKR--------------- 241 (442)
Q Consensus 190 ~~-~gd~Vi~~~~~h~s~~~---~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~----~~~~~--------------- 241 (442)
++ +||.|++++++|.+.+. .+...|.+++.++.+ |++++++.+++.. +..+.
T Consensus 76 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~ 155 (353)
T PLN02721 76 CDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCL 155 (353)
T ss_pred ccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccc
Confidence 87 99999999999977665 356678888888753 6888888886320 01000
Q ss_pred -------------cccccccccC--CCccccccCCCC----CceeEEEEeccccccCC-CcEEEcCHHhHHHHHhhCCce
Q 013461 242 -------------SNSFGVLGRS--GRGLTEHCGVPV----DKIDIVTAAMGHALATE-GGFCTGSARVVDHQRLSSSGY 301 (442)
Q Consensus 242 -------------a~~~g~~G~~--g~g~~~~~~v~~----~~~diii~S~sK~lg~~-GG~v~g~~~~i~~l~~~~~~~ 301 (442)
.|++-++-+. ..+.....+.++ .++|.++.|+||+++.. ||++++++++++.+......+
T Consensus 156 ~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~ 235 (353)
T PLN02721 156 SVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKAKRLRKTL 235 (353)
T ss_pred cHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhHHHHHHhc
Confidence 1111111110 000000112222 25678888999999864 446789999988765432211
Q ss_pred eccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCcee-ecCCCCCEEEEEecCCCCCchhhHHHHHH
Q 013461 302 VFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSI-ASNPESPIVFLILEKSTGSMKNDLQLLED 380 (442)
Q Consensus 302 ~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 380 (442)
..+....+..++++..+++.. .+..++..++.+++.+.|++++++.+ ...+.++++++.+....+ ....+
T Consensus 236 ~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 306 (353)
T PLN02721 236 GGGMRQVGVLAAAALVALQEN---VPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSR------ITAEK 306 (353)
T ss_pred CCCeehhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCcc------ccHHH
Confidence 111111223333344444322 22344456778899999988777754 344567788877743110 11346
Q ss_pred HHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 381 IADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 381 i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
+++. |.++||.+.+... ..+|++++..++++|+++++++|++++.
T Consensus 307 ~~~~-L~~~gi~v~~~~~---------~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 307 LCKS-LEEHGVLLMPGNS---------SRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred HHHH-HHhCCcEEecCCC---------ceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 7776 4567999987632 3499999988999999999999998764
No 147
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.85 E-value=7.3e-19 Score=176.02 Aligned_cols=317 Identities=17% Similarity=0.165 Sum_probs=201.8
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----CcEEEEcchHHHHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PDSILYSYGLSTMF 183 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e~~i~~~sG~~a~~ 183 (442)
|.+++||+.+.. .+..+|.+.+++.+.+.+... .+....|..++++.+++.+++.+|. +++++++++++|+.
T Consensus 32 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 32 GRSIVDLTVGEP-DFDTPDHIKQAAVAAIERGET---KYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred cCCEEEcCCCCC-CCCCCHHHHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 456889877652 444578899999988875221 2223346667777777777777674 34555555679999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhccc-------ccc--------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTAD-------NKR-------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~-------~~~-------- 241 (442)
.++.+++++||.|++++++|..+...+...+..++.++.. |++++++.++...+. ++.
T Consensus 108 ~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~ 187 (402)
T PRK06107 108 LALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAE 187 (402)
T ss_pred HHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHH
Confidence 9999899999999999998887777777777777666531 346666655432111 000
Q ss_pred ---------cc-cccccccC--------CCccccccCCCC--CceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhC
Q 013461 242 ---------SN-SFGVLGRS--------GRGLTEHCGVPV--DKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 ---------a~-~~g~~G~~--------g~g~~~~~~v~~--~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~ 298 (442)
.| ++-++-+. +........+.+ .+..++++||||.+|.+| ||+++++++++.+....
T Consensus 188 ~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~ 267 (402)
T PRK06107 188 LRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQ 267 (402)
T ss_pred HHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHH
Confidence 22 32222111 100000011111 245789999999998766 99999999999887653
Q ss_pred CceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCC-chhh--
Q 013461 299 SGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGS-MKND-- 374 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~-~~~~-- 374 (442)
... +.+.+.+.++++..+|+.-+ .....++.++++.+.+.+.|++++|+++..+..+.++|+.+...... .+..
T Consensus 268 ~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~ 345 (402)
T PRK06107 268 SQS--SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKV 345 (402)
T ss_pred Hhc--ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccC
Confidence 222 22335555555555553111 12345778888999999999887677776555566677766310000 0000
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.....+++..+++++||.+.++..+.. ++.+|+++.. ++|++++++++|+++++++
T Consensus 346 ~~~~~~~~~~l~~~~gv~v~pg~~Fg~-----~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 346 LETDQDVVLYLLDSAGVAVVQGTAYGL-----SPYFRLSIAT--SLETLEEACARIERAVAAL 401 (402)
T ss_pred CCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence 001235666677778999999876642 3569999995 7999999999999887664
No 148
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=9e-19 Score=172.62 Aligned_cols=294 Identities=14% Similarity=0.147 Sum_probs=194.9
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcch-HHHHHh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYG-LSTMFS 184 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG-~~a~~~ 184 (442)
+++++||+.+.. .++.+|.+++++.+.+...... .|.. ....+|++.+|+++|.+ +.|++++| ++++..
T Consensus 25 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~Y~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~ 96 (356)
T PRK04870 25 ATGMVKLDAMEN-PYRLPAELRAELGERLAEVALN------RYPD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQL 96 (356)
T ss_pred CCCceeCcCCCC-CCCCCHHHHHHHHHHhhccccc------cCCC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHH
Confidence 467999976642 4556799999999988642211 1111 12368999999999953 24555555 578888
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhccc--------ccc----------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTAD--------NKR---------- 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~--------~~~---------- 241 (442)
++.+++++||.|+++.++|..+...++..|++++.++.+ |++++++.++....+ ++.
T Consensus 97 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~ 176 (356)
T PRK04870 97 LALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVE 176 (356)
T ss_pred HHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHH
Confidence 888899999999999999999998899999999988753 567777776532211 110
Q ss_pred -----cccccccccCCCcccc---ccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHH
Q 013461 242 -----SNSFGVLGRSGRGLTE---HCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPY 310 (442)
Q Consensus 242 -----a~~~g~~G~~g~g~~~---~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~ 310 (442)
++.+-+..+....+.. ...+...+..+++.|||| +|++| ||+++++++++.++.....+ +.+.+
T Consensus 177 ~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~----~~~~~ 251 (356)
T PRK04870 177 RIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPY----NVNVL 251 (356)
T ss_pred HHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCC----cCCHH
Confidence 1111111111101100 001112235789999999 87766 99999999999887654222 23445
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 013461 311 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDG 390 (442)
Q Consensus 311 ~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~G 390 (442)
...++..+++..+...+.+++++++++++.+.|++++|+.+. ++.+.++++.++. ..++.+. |+++|
T Consensus 252 ~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~-l~~~g 318 (356)
T PRK04870 252 TQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVPD-----------AAAVFDG-LKTRG 318 (356)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECCC-----------HHHHHHH-HHHCC
Confidence 555555555433333456778888999999999887787765 4567788887631 1256654 66779
Q ss_pred EEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 391 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 391 V~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
|.|+++..+.. ..+..+||+++ +.+++++++++|+++
T Consensus 319 I~v~~~~~f~~---~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 319 VLVKNLSGMHP---LLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred EEEEECCCCCC---CCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 99998754321 12356999997 789999999999875
No 149
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=2.3e-18 Score=171.76 Aligned_cols=306 Identities=13% Similarity=0.122 Sum_probs=197.5
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC-----CcEEEEcchH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT-----PDSILYSYGL 179 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~-----e~~i~~~sG~ 179 (442)
..+|||+.++. .+..++.+.+++.+.+...-..+. ...|. .++++.+|+++ |. ++++++++++
T Consensus 30 ~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~---~~~g~----~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEP-DFTTPDHVKEAAKRAIDANQSHYT---GMAGL----LELRQAAADFVKEKYNLDYAPENEILVTIGAT 101 (391)
T ss_pred CCeEEcCCCCC-CCCCCHHHHHHHHHHHhcCCCCCC---CCCCc----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChH
Confidence 45899987653 455567888998888764211111 12233 45666666655 42 3567777778
Q ss_pred HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccccc------------
Q 013461 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKR------------ 241 (442)
Q Consensus 180 ~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~------------ 241 (442)
+++..++.+++++||.|++..+.|..+...++..|.+++.++.+ |++++++.+++..++.+.
T Consensus 102 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~ 181 (391)
T PRK07309 102 EALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGV 181 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCc
Confidence 99999999999999999999999999988888999998887642 567888777643211110
Q ss_pred ---------------cccccccccCC-Cccc-------cccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHH
Q 013461 242 ---------------SNSFGVLGRSG-RGLT-------EHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 295 (442)
Q Consensus 242 ---------------a~~~g~~G~~g-~g~~-------~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~ 295 (442)
.|++-++-+.- ..+. ...... .+..|+++||||++|++| ||+++++++++.+.
T Consensus 182 ~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~ 260 (391)
T PRK07309 182 TYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLI 260 (391)
T ss_pred CcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChhhccCccceeEEEEeCHHHHHHHH
Confidence 22221111110 0000 000111 245689999999998777 99999999999887
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
... .+... +.+++...++.++++.... ....+++++++++++.+.|++. |+.+..+..+.++|+.++.... .+
T Consensus 261 ~~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l~~~~~---~~ 334 (391)
T PRK07309 261 KSH-QYLVT-AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKIPAGYN---QD 334 (391)
T ss_pred HHH-hhccc-CCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEECCCCCC---CC
Confidence 542 23222 3345555555555543211 1345678888999999999886 7777654445556766643211 01
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..++++++++++||.+.++..+... .+..+||+++. +.+++++++++|++++++.
T Consensus 335 ---~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 335 ---SFKFLQDFARKKAVAFIPGAAFGPY---GEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred ---HHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 2356766666779999988754311 13569999985 6799999999999988654
No 150
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.85 E-value=1.1e-18 Score=176.41 Aligned_cols=315 Identities=15% Similarity=0.135 Sum_probs=212.2
Q ss_pred CeeEEEeecCCC-CCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcch
Q 013461 108 GKEVVNFASANY-LGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYG 178 (442)
Q Consensus 108 G~~~id~~s~~~-l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~sG 178 (442)
....++|+.++. ..+-+.....+++.+.++.++... -..|+......+|++.|++++ | .++++++++.
T Consensus 88 ~~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~---~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 88 DPSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASL---ALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred CCceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhh---hhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCH
Confidence 367899976642 233345677778878877654431 123344444556666666655 4 2455666666
Q ss_pred HHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhcccccc-------------
Q 013461 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKR------------- 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~~~~~------------- 241 (442)
.+|+..+++.+++|||.|++++++|......++..|.+++.++.+ |+++||+.+++...+...
T Consensus 165 q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tm 244 (459)
T COG1167 165 QQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTM 244 (459)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCcc
Confidence 699999999999999999999999999999999999999988864 689999999875332110
Q ss_pred -------------cccccccccCCCccccc--------cCCCCCceeEEEEecccccc--CCCcEEEcCHHhHHHHHhhC
Q 013461 242 -------------SNSFGVLGRSGRGLTEH--------CGVPVDKIDIVTAAMGHALA--TEGGFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 -------------a~~~g~~G~~g~g~~~~--------~~v~~~~~diii~S~sK~lg--~~GG~v~g~~~~i~~l~~~~ 298 (442)
.|++-++.++..+...+ ...+.++..|.++||||++. ...||+++++++++.+....
T Consensus 245 s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k 324 (459)
T COG1167 245 SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLK 324 (459)
T ss_pred CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHH
Confidence 45555554433332221 22233478999999999995 45699999999999887654
Q ss_pred CceeccCCCcHHHHHHHHHHHH---HHhcChHHHHHHHHHHHHHHHhhccCC--CceeecCCCCCEEEEEecCCCCCchh
Q 013461 299 SGYVFSASLPPYLASAAITAID---VLEENPDLITKLKKNTAILRTGLSDIH--GLSIASNPESPIVFLILEKSTGSMKN 373 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~---~l~~~~~~~~~l~~~~~~l~~~L~~~~--g~~~~~~~~~~i~~~~~~~~~~~~~~ 373 (442)
.....+ .+.+...+...-+. +.+....+++.++++.+.+.+.|.+.. ++++..+..+.++|+.++...
T Consensus 325 ~~~~~~--~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~----- 397 (459)
T COG1167 325 QAADLG--PSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI----- 397 (459)
T ss_pred HHhcCC--CChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC-----
Confidence 332222 24444333323332 111235688889999999999998762 345555556678888885532
Q ss_pred hHHHHHHHHHHHHHhCCEEEee-ccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 374 DLQLLEDIADWALKEDGVFVVT-SKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 374 ~~~~~~~i~~~~L~~~GV~v~~-~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
...++...++++ ||.+.+ +..+..... ..+.+|++++. .+++++++++..|.+++.+..
T Consensus 398 ---~~~~l~~~a~~~-gv~i~~~g~~f~~~~~-~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 398 ---DARELLAAALEK-GVVVTPLGSAFSADGD-PRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred ---CHHHHHHHHHHC-CCEEEcCCccccCCCC-CCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHh
Confidence 134677766654 888888 655443221 23579999997 569999999999999988764
No 151
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.84 E-value=1.2e-18 Score=175.44 Aligned_cols=313 Identities=15% Similarity=0.074 Sum_probs=201.8
Q ss_pred CeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcC-CCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEEEE
Q 013461 108 GKEVVNFASANYL---GLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILY 175 (442)
Q Consensus 108 G~~~id~~s~~~l---~~~~~p~v~ea~~~~l~~~g-~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i~~ 175 (442)
|+++|+|+.++.- .+..+|++++++.++++... .+++ ......++++.+|++++ .++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~-------~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it 123 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYS-------TCVGLLPARRAIAEYLSRDLPYELSTDDIYLT 123 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCC-------CCccCHHHHHHHHHHHhhccCCCCChhhEEEe
Confidence 7889999877542 35567899999999887521 1121 12223567777777663 2567778
Q ss_pred cchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhccc-------ccc
Q 013461 176 SYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTAD-------NKR 241 (442)
Q Consensus 176 ~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~-------~~~ 241 (442)
+++++++..++.++.++||.|+++.++|+.+.......|.+++.++. -|+++++++++..+.. ++.
T Consensus 124 ~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPt 203 (430)
T PLN00145 124 AGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPC 203 (430)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCC
Confidence 88889999999999999999999999999888888888998887753 2677887766543221 110
Q ss_pred -----------------cccccccccCCC-cc-------ccccCCCCCceeEEEEeccccccCCC---cEEEc--CHHhH
Q 013461 242 -----------------SNSFGVLGRSGR-GL-------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTG--SARVV 291 (442)
Q Consensus 242 -----------------a~~~g~~G~~g~-g~-------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g--~~~~i 291 (442)
.+++-++-+.-. .+ .....+...+..|+++||||.++++| ||+++ ++.++
T Consensus 204 G~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~ 283 (430)
T PLN00145 204 GSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGIL 283 (430)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhh
Confidence 122222211100 00 00001112335799999999998887 99986 44443
Q ss_pred H------HHHhhCCceeccCCCcHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEE
Q 013461 292 D------HQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFL 362 (442)
Q Consensus 292 ~------~l~~~~~~~~~s~s~~p~~aaaa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~~~~i~~~ 362 (442)
+ .++... . .+.+.+.+.++++..+|+.- +...+.++.++++++.+.+.|++++++.+. .+..+.++++
T Consensus 284 ~~~~~~~~~~~~~--~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v 360 (430)
T PLN00145 284 KETKVVDSIRNYL--N-ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMV 360 (430)
T ss_pred hhhHHHHHHHHHh--c-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEe
Confidence 3 332221 1 12223455555555666531 112456788899999999999887777653 3456677777
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 363 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
.++..... +.....+++.++++++||.+.|+..+.. ++.+||++.. +++++++++++|++++.+..++
T Consensus 361 ~l~~~~~~---~~~~~~~~~~~ll~~~gV~v~pG~~fg~-----~~~lRis~~~--~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 361 KLDLSCLS---GIKDDMDFCCKLAKEESVVVLPGSALGM-----KNWLRITFAI--DPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred ccChhhcC---CCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEeCC--CHHHHHHHHHHHHHHHHHhccc
Confidence 76421000 0001235777778888999999876542 4679999984 7899999999999998876554
No 152
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.84 E-value=1.1e-18 Score=173.73 Aligned_cols=302 Identities=15% Similarity=0.186 Sum_probs=190.7
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----CcEEE-Ecch
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSIL-YSYG 178 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e~~i~-~~sG 178 (442)
|++++||++++. ++..++.+.+++.+.+..... ..+....|. .+|++.+|+++ |. ++.++ ++++
T Consensus 28 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~ 100 (383)
T TIGR03540 28 GVDVISLGIGDP-DLPTPKHIVEALCKAAENPEN--HRYPSYEGM----LAYRQAVADWYKRRFGVELDPETEVLSLIGS 100 (383)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCC----HHHHHHHHHHHHHhhCCCCCCCCeEEECCCc
Confidence 567899988763 555678899999887764211 111112233 45556666554 43 33344 4556
Q ss_pred HHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc-------cccc---
Q 013461 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA-------DNKR--- 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~-------~~~~--- 241 (442)
++++..++.+++++||.|+++.++|..+...++..|.+++.++.+ |++++++.+....+ .++.
T Consensus 101 ~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~ 180 (383)
T TIGR03540 101 KEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAV 180 (383)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCcc
Confidence 799999999999999999999999999888888999998887742 45566555432111 1110
Q ss_pred --------------cccccccccC--------CCccccccCCCC-CceeEEEEeccccccCCC---cEEEcCHHhHHHHH
Q 013461 242 --------------SNSFGVLGRS--------GRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 295 (442)
Q Consensus 242 --------------a~~~g~~G~~--------g~g~~~~~~v~~-~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~ 295 (442)
.|++-++-+. +........++. .+.+|+++||||++|++| ||+++++++++.+.
T Consensus 181 ~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~ 260 (383)
T TIGR03540 181 APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLG 260 (383)
T ss_pred CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHH
Confidence 2222111111 100111111111 245788999999999877 99999999998876
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
...... ..+.+.....++.++++..+ ..+++++.++++++.+.+.|++. |+.+..+..+.++++.+++..
T Consensus 261 ~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~~~~------ 331 (383)
T TIGR03540 261 KVKTNV--DSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVPEGY------ 331 (383)
T ss_pred HHHHhc--ccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECCCCC------
Confidence 543221 12223444455555654321 22456778889999999999987 887765445556777774311
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
...++++.+++++||.+.++..+... .++.+||+++ .+++++++++++|++
T Consensus 332 --~~~~~~~~ll~~~gi~v~~g~~f~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 332 --TSAEFAARLLEETGVVVTPGVGFGEY---GEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred --CHHHHHHHHHHHCCEEEecchhhCcc---CCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 12367777777779999988665321 1246999997 467888888887764
No 153
>PRK08068 transaminase; Reviewed
Probab=99.84 E-value=7e-19 Score=175.44 Aligned_cols=302 Identities=18% Similarity=0.203 Sum_probs=191.7
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----C-cEEEEcch
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----P-DSILYSYG 178 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e-~~i~~~sG 178 (442)
|.++|||+.+++ ++..+|.+.+++.+.+..... .. |+......+|++++|+++ |. + +.+++++|
T Consensus 31 ~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~~--~~----Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~ 103 (389)
T PRK08068 31 GHDVINLGQGNP-DQPTPEHIVEALQEAAENPAN--HK----YSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGG 103 (389)
T ss_pred CCCeEEecCCCC-CCCCCHHHHHHHHHHHhCCCC--CC----CCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCc
Confidence 457899988864 455568899999888764211 11 111122356666676665 52 3 45666777
Q ss_pred HHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc-------cccc---
Q 013461 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA-------DNKR--- 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~-------~~~~--- 241 (442)
.+++..++.+++++||.|+++.++|..+...++..|++++.++.+ |.+++++.+....+ .++.
T Consensus 104 ~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~ 183 (389)
T PRK08068 104 KAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAV 183 (389)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCc
Confidence 789988899999999999999999999999999999999888753 34455554432111 1111
Q ss_pred --------------cccccccccC--------CCccccccC-CCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHH
Q 013461 242 --------------SNSFGVLGRS--------GRGLTEHCG-VPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 295 (442)
Q Consensus 242 --------------a~~~g~~G~~--------g~g~~~~~~-v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~ 295 (442)
.|++-++-+. +........ ...++..|+++||||++|++| ||+++++++++.+.
T Consensus 184 ~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~ 263 (389)
T PRK08068 184 ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAIN 263 (389)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHH
Confidence 1222221111 100000001 111345789999999999888 99999999999887
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
.....+. .+.++..+.++.+++... +..+.++++++++++++.+.|++. |+.+..+..+.++++.++...
T Consensus 264 ~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~~~g~~~~~v~~~~~~------ 334 (389)
T PRK08068 264 LLQDHLF--VSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVDAPKGSFFAWMPVPKGY------ 334 (389)
T ss_pred HHHhhcc--CCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCCCC------
Confidence 6644432 233444444444555321 122457888899999999999887 777654434455677774311
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
...++++.+++++||.+.++..+... .+..+||+++. .++++++++++|++
T Consensus 335 --~~~~~~~~l~~~~gi~v~pg~~f~~~---~~~~iRi~~~~--~~~~l~~al~~l~~ 385 (389)
T PRK08068 335 --TSEQFADLLLEKAHVAVAPGNGFGEH---GEGYVRVGLLT--DEERLREAVERIGK 385 (389)
T ss_pred --CHHHHHHHHHHhCCEEEecchHhCcc---CCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 12367777666679999987654321 13469999973 67788888877765
No 154
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.84 E-value=6.5e-19 Score=172.94 Aligned_cols=289 Identities=17% Similarity=0.179 Sum_probs=193.5
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSA 185 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~a 185 (442)
+.++|||+++++ ++..+|++++++.+++... ..++ ... ..++++.+|++++. ++.++++++++++..+
T Consensus 18 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~-~~y~-------~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~ 87 (346)
T TIGR01141 18 GKEVIKLNSNEN-PFGPPPKAKEALRAEADKL-HRYP-------DPD-PAELKQALADYYGVDPEQILLGNGSDEIIELL 87 (346)
T ss_pred CCceEEccCCCC-CCCCCHHHHHHHHHhHHHh-hcCC-------CCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHH
Confidence 357999998875 6777899999999887542 1111 111 26899999999985 3456666666888888
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhcccc-------cc------------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-----NDMDSLRNTLERVTADN-------KR------------ 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~-------~~------------ 241 (442)
+.+++++||.|+++.++|..+...+...|.+++.++. .|++.+++.+...+.-. +.
T Consensus 88 ~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 88 IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 8888999999999999998777777888999888764 25666666543211100 00
Q ss_pred ---c-cccccc-ccCCCcc------ccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCC
Q 013461 242 ---S-NSFGVL-GRSGRGL------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASL 307 (442)
Q Consensus 242 ---a-~~~g~~-G~~g~g~------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~ 307 (442)
+ ++.-++ .+....+ ..... ..+.+++++|+||.+|++| ||+++++++++.++..... + +.
T Consensus 168 ~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~--~~ 241 (346)
T TIGR01141 168 LERTPEDALVVVDEAYGEFSGEPSTLPLLA--EYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP--F--NL 241 (346)
T ss_pred HHhCCCCcEEEEECchhhhcCCccHHHHHh--hCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--C--CC
Confidence 1 011111 1100000 01111 1123688999999998766 9999999999988764332 2 23
Q ss_pred cHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 308 PPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 308 ~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
+++.+.++.++++......+.+++++++.+++.+.|.+++|+++. ++.++++++.+.. ...++++. |.
T Consensus 242 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~----------~~~~~~~~-L~ 309 (346)
T TIGR01141 242 SRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR----------DADALFEA-LL 309 (346)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC----------CHHHHHHH-HH
Confidence 556666666666544333457788899999999999887788765 3467788887642 12367775 44
Q ss_pred hCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 388 ~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
++||.+.++..+.. .+..+|++++ |++|+++++++|+
T Consensus 310 ~~gI~v~~g~~f~~----~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 310 EKGIIVRDLNSYPG----LPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred HCCeEEEeCCCcCC----CCCeEEEecC---CHHHHHHHHHHhC
Confidence 57999998865421 1356999986 8999999998873
No 155
>PRK07683 aminotransferase A; Validated
Probab=99.84 E-value=1.4e-18 Score=173.04 Aligned_cols=303 Identities=14% Similarity=0.107 Sum_probs=193.5
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----C-cEEEEcchH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----P-DSILYSYGL 179 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e-~~i~~~sG~ 179 (442)
..++||+.++. .+..++.+++++.+.+.+....+ +......+|++.+|+++ |. + +.+++++++
T Consensus 28 ~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~ 99 (387)
T PRK07683 28 DNLISLTIGQP-DFPTPSHVKEAAKRAITENYTSY-------THNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGAS 99 (387)
T ss_pred CCeEEecCCCC-CCCCCHHHHHHHHHHHhcCCCCC-------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChH
Confidence 46799987753 44556789999999887532222 11222356666666665 42 3 566667778
Q ss_pred HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccc-------cc-----
Q 013461 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADN-------KR----- 241 (442)
Q Consensus 180 ~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~-------~~----- 241 (442)
+|+..++.+++++||.|+++.++|..+...++..|+++++++.+ |.+++++.+...++.. +.
T Consensus 100 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s 179 (387)
T PRK07683 100 EAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLS 179 (387)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCC
Confidence 99999999999999999999999998888888899999888743 3466766654322110 00
Q ss_pred ----------c--cccc----------ccccCCCccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHh
Q 013461 242 ----------S--NSFG----------VLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRL 296 (442)
Q Consensus 242 ----------a--~~~g----------~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~ 296 (442)
+ +++- .++.....+..+.+ ..+.+|+++||||++|.+| ||+++++++++.+..
T Consensus 180 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~ 257 (387)
T PRK07683 180 KEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPE--MREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILK 257 (387)
T ss_pred HHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccC--CcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHH
Confidence 1 1111 11111112222111 1245789999999999777 999999999998875
Q ss_pred hCCceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhH
Q 013461 297 SSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDL 375 (442)
Q Consensus 297 ~~~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~ 375 (442)
.. .+.+. +.+.+.+.++.+.|+..+ .....+++++++++++.+.|.+. ++.+..+..+.+++..+... + .+
T Consensus 258 ~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~---~~- 329 (387)
T PRK07683 258 VH-QYNVT-CASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFYLFPSIGHF-T---MS- 329 (387)
T ss_pred HH-HhccC-CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEEEEEecccC-C---CC-
Confidence 42 22222 224445555555554221 12346777888999999999886 77665443344455444321 0 01
Q ss_pred HHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 376 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 376 ~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..+++..+++++||.+.++..+... .+..+||++.. +++++++++++|.+++.+
T Consensus 330 --~~~~~~~ll~~~gI~v~pg~~f~~~---~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 330 --SFDFALDLVEEAGLAVVPGSAFSEY---GEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred --HHHHHHHHHHhCCEEEcCchhhCCC---CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 2246666677789999998764311 13569999985 789999999999987754
No 156
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.84 E-value=1.1e-18 Score=174.82 Aligned_cols=310 Identities=13% Similarity=0.124 Sum_probs=199.0
Q ss_pred CeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-------CCcEEEEcc
Q 013461 108 GKEVVNFASANYL---GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-------TPDSILYSY 177 (442)
Q Consensus 108 G~~~id~~s~~~l---~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-------~e~~i~~~s 177 (442)
|++++||+.+++- .+..++.+.+++.+.++.... . .|+......+|++.+|++++ .++++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~--~----~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G 103 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKY--N----GYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSG 103 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCC--C----CCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcC
Confidence 4678999887653 466678999999888775211 1 12222233677888888875 246677777
Q ss_pred hHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhccc-------ccc--
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTAD-------NKR-- 241 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~-------~~~-- 241 (442)
+++++..++.+++++||.|++..++|..+...++..|.+++.++. .|++.+++.++..++. ++.
T Consensus 104 ~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~ 183 (401)
T TIGR01264 104 CSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGS 183 (401)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCC
Confidence 789999999999999999999999999988888999999877653 2567777665432211 000
Q ss_pred ---------------ccccccccc--------CCCccccccCCCCCceeEEEEeccccccCCC---cEEEcCH------H
Q 013461 242 ---------------SNSFGVLGR--------SGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSA------R 289 (442)
Q Consensus 242 ---------------a~~~g~~G~--------~g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~------~ 289 (442)
.+++-++-+ ++........+.+....|+++||||+++++| ||+++++ +
T Consensus 184 ~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~ 263 (401)
T TIGR01264 184 VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRD 263 (401)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHH
Confidence 122222111 1110011111222223688999999998777 9999874 4
Q ss_pred hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCC
Q 013461 290 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKS 367 (442)
Q Consensus 290 ~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~ 367 (442)
+++.++..... .+ +.+++.+.++.++++.. +...+.+++++++++++.+.|++++|+.+..+..+.++|+.++..
T Consensus 264 ~~~~~~~~~~~-~~--~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~ 340 (401)
T TIGR01264 264 IRDGLVKLSQR-IL--GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEME 340 (401)
T ss_pred HHHHHHHHhhc-cC--CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEeccc
Confidence 55555433211 11 22445555555566431 122456778888999999999887677655556788888887421
Q ss_pred CCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 368 TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 368 ~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.. ++.....++++.+++++||++.++..+.. +..+||+++. +++++++++++|.+++++
T Consensus 341 ~~---~~~~~~~~~~~~l~~~~gI~v~pg~~f~~-----~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 341 HF---PEFKNDVEFTERLVAEQSVFCLPGSCFEY-----PGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred cc---CCCCCHHHHHHHHHHhCCEEEeCchhcCC-----CCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 00 00001235677667678999998865432 3569999985 689999999999988754
No 157
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.84 E-value=1.2e-19 Score=171.56 Aligned_cols=306 Identities=16% Similarity=0.201 Sum_probs=210.0
Q ss_pred CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-----CcEEEEcchHHHHHhhhhhhccC
Q 013461 118 NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILYSYGLSTMFSAIPCFCKK 192 (442)
Q Consensus 118 ~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~-----e~~i~~~sG~~a~~~ai~a~~~~ 192 (442)
++..+..++.+.++++++++.-. ...+.-.||..++...|++.+++++|. +++++++++.+++.+++.+++++
T Consensus 39 Gfp~~~~P~fv~ea~~~~~~~~~--~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~ 116 (420)
T KOG0257|consen 39 GFPDFPPPKFVTEAAKNAAKEPS--TNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNP 116 (420)
T ss_pred CCCCCCCcHHHHHHHHHHhccch--hccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCC
Confidence 33456567788999999887631 222233578899999999999998883 35677777789999999999999
Q ss_pred CCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------------CHHHHHHHHHhhcccccc------------------
Q 013461 193 GDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------------DMDSLRNTLERVTADNKR------------------ 241 (442)
Q Consensus 193 gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------------d~~~Le~~l~~~~~~~~~------------------ 241 (442)
||+|++.+|++.++...+++.|++++.++.+ |+++||..+.+.++....
T Consensus 117 GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ 196 (420)
T KOG0257|consen 117 GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELER 196 (420)
T ss_pred CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHH
Confidence 9999999999999999999999998877643 778888887765542111
Q ss_pred ------ccccccccc--------CC---CccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCce
Q 013461 242 ------SNSFGVLGR--------SG---RGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGY 301 (442)
Q Consensus 242 ------a~~~g~~G~--------~g---~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~ 301 (442)
.|+.-++-+ +| .-++...|+ .++.|.++|+||++|++| ||+++++.++.+.+......
T Consensus 197 ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm--~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~ 274 (420)
T KOG0257|consen 197 IAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGM--YERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF 274 (420)
T ss_pred HHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCch--hheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence 333332211 11 111111232 468899999999999998 99999999999888766555
Q ss_pred eccCCCcHHHHHHHH-HHHHHH-h-----c-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCch-
Q 013461 302 VFSASLPPYLASAAI-TAIDVL-E-----E-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMK- 372 (442)
Q Consensus 302 ~~s~s~~p~~aaaa~-aal~~l-~-----~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~- 372 (442)
+|..+ .|.+.|.+. -+++.. . . ..++.+.++++++.|.+.|.++ |+++..+.++++++..++.......
T Consensus 275 ~~~~~-Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~ 352 (420)
T KOG0257|consen 275 VFTCP-TPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWPFF 352 (420)
T ss_pred ccccC-cHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCCcc
Confidence 55553 344333222 122221 1 1 1247788999999999999998 9999988888999988862211100
Q ss_pred ---hhHHHHHHHHHHHHHhCCEEEeeccCcccccCCC--CCceEEEecCCCCHHHHHHHHHHHH
Q 013461 373 ---NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL--PVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 373 ---~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~--~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
.+....-+++..++++.|+.+.|.+.+....+.. ...+|+++.. +++-++.+++.|+
T Consensus 353 ~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k--~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 353 EEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK--ADETLRKAIERLK 414 (420)
T ss_pred hhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh--hHHHHHHHHHHHh
Confidence 0001123456667888899988877654322210 1127777775 7788888888877
No 158
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.84 E-value=9.2e-19 Score=174.71 Aligned_cols=304 Identities=15% Similarity=0.206 Sum_probs=196.0
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcchHHH
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGLST 181 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~sG~~a 181 (442)
.+|||+.++ ..+..++.+.+++.+.+...-..++ ...|. .+|++.+|+++ | .++++++++++++
T Consensus 34 ~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~---~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 105 (391)
T PRK08361 34 NVISLGIGE-PDFDTPKNIKEAAKRALDEGWTHYT---PNAGI----PELREAIAEYYKKFYGVDVDVDNVIVTAGAYEA 105 (391)
T ss_pred CeEEcCCCC-CCCCCCHHHHHHHHHHHhcCCCCCC---CCCCc----HHHHHHHHHHHHHHhCCCCCcccEEEeCChHHH
Confidence 579997765 2444468889988888764211111 12233 56666666665 4 2467777778899
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhccc-------ccc------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTAD-------NKR------ 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~-------~~~------ 241 (442)
+..++.+++++||.|++++++|.++...+...|.+++.++. .|++++++.++..++. ++.
T Consensus 106 l~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~ 185 (391)
T PRK08361 106 TYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDK 185 (391)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCH
Confidence 99999999999999999999999999989899999988875 2567777766542211 000
Q ss_pred -----------cccccccccC--------CCccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCC
Q 013461 242 -----------SNSFGVLGRS--------GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 -----------a~~~g~~G~~--------g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~ 299 (442)
.+++-++-+. +.......... .+.+++++||||++|++| ||+++++++++.+.....
T Consensus 186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~ 264 (391)
T PRK08361 186 EVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHA 264 (391)
T ss_pred HHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHh
Confidence 1111111110 00000111111 246899999999999777 999999999988754422
Q ss_pred ceeccCCCcHHHHHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHH
Q 013461 300 GYVFSASLPPYLASAAITAIDVLEE---NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 300 ~~~~s~s~~p~~aaaa~aal~~l~~---~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 376 (442)
...+ +.+.+...++.++++.-.. ....++.++++.+.+.+.|++++++.+..+..+.++|+.+... + .+
T Consensus 265 ~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~-~---~~-- 336 (391)
T PRK08361 265 YIIG--NVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDET-G---MS-- 336 (391)
T ss_pred hhcc--CCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCC-C---CC--
Confidence 2122 2355555555556543211 2356778888899999999887777776544455677777421 1 01
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..++++.+++++||.+.++..+... .+..+||+++. +++++++++++|++++++
T Consensus 337 -~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~~--~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 337 -SEDFAEWLLEKARVVVIPGTAFGKA---GEGYIRISYAT--SKEKLIEAMERMEKALEE 390 (391)
T ss_pred -HHHHHHHHHHhCCEEEcCchhhCCC---CCCEEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 2356776666679999987654321 13569999984 788999999999887653
No 159
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-18 Score=170.74 Aligned_cols=296 Identities=14% Similarity=0.106 Sum_probs=191.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSA 185 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~a 185 (442)
++++|||+++.. .++.+|.+.+++.+.+...-..+ ... ...+|++.+|++++. +++++++++++++..+
T Consensus 23 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~~y-------~~~-~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~ 93 (353)
T PRK05387 23 LAKLIKLNTNEN-PYPPSPKVLEAIRAALGDDLRLY-------PDP-NADALRQAIAAYYGLDPEQVFVGNGSDEVLAHA 93 (353)
T ss_pred ccceeeccCCCC-CCCCCHHHHHHHHHHhhhhhhcC-------CCC-cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHH
Confidence 457899987753 35457899999988776411111 111 126899999999985 4566667777999999
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhh---cccccc---------------c
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERV---TADNKR---------------S 242 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~---~~~~~~---------------a 242 (442)
+.+++++||.|++++++|..+...++..|.+++.++.. |++++++..+.. .+.++. .
T Consensus 94 ~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~ 173 (353)
T PRK05387 94 FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAAN 173 (353)
T ss_pred HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 99999999999999999988887788889888777642 344443210000 000100 1
Q ss_pred ccccccccC------CCccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHH
Q 013461 243 NSFGVLGRS------GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLAS 313 (442)
Q Consensus 243 ~~~g~~G~~------g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aa 313 (442)
+++-++-+. +....... ...+.+++++||||++|++| ||+++++++++.++.....+ .+.+.+++...
T Consensus 174 ~~~~livDe~y~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~-~~~~~~~~~q~ 250 (353)
T PRK05387 174 PDSVVVIDEAYVDFGGESAIPLI--DRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSF-NSYPLDRLAQA 250 (353)
T ss_pred CCcEEEEeCcccccCCcchHHHH--hhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccC-CCCCcCHHHHH
Confidence 121111111 00000001 11345799999999999777 99999999999887654221 12334555655
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 013461 314 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 314 aa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v 393 (442)
++.++++..+..++.+++++++++++.+.|++. |+++. ++.++++++.++.. + ..++++.+ .++||.+
T Consensus 251 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------~---~~~~~~~l-~~~gi~v 318 (353)
T PRK05387 251 GAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSH------D---AAELAAKL-RERGIIV 318 (353)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCC------C---HHHHHHHH-HHCCEEE
Confidence 565666432223457788889999999999887 87764 45677777765321 1 23577764 5669999
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.....+. .+..+|++++ +++++++++++|++++.
T Consensus 319 ~~~~~~~-----~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 319 RHFNKPR-----IDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EECCCCC-----CCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 7532221 1356999996 77999999999998753
No 160
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.84 E-value=6.5e-20 Score=178.69 Aligned_cols=238 Identities=23% Similarity=0.324 Sum_probs=169.7
Q ss_pred eeecCCCCeEE-ECCeeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh--CC
Q 013461 95 VLESAAGPHTI-ISGKEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL--GT 169 (442)
Q Consensus 95 ~~~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~--g~ 169 (442)
+|++++|.|+| .||++||||.++ ...+++ +||++.+++.+++.+....+. .....+...+|.++|.+.+ +.
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~----~~~~~~~~~~la~~L~~~~p~~~ 76 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSF----SGFTHPEAAELAEKLAELFPGGL 76 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCST----TTSEEHHHHHHHHHHHHHSSTTE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccc----cceeccchhhhhhhhhhcccccc
Confidence 47889999999 599999999653 334444 479999999999998544321 1234678889999999999 46
Q ss_pred CcEEEEcchHHHHHhhhhhhc---------cCCCEEEeCCCchHHHHHHHHhcCC------------eEEEecCCCHHH-
Q 013461 170 PDSILYSYGLSTMFSAIPCFC---------KKGDLIVADEGVHWGIQNGLYLSRS------------TVVYFKHNDMDS- 227 (442)
Q Consensus 170 e~~i~~~sG~~a~~~ai~a~~---------~~gd~Vi~~~~~h~s~~~~~~l~g~------------~v~~~~~~d~~~- 227 (442)
+++.+++||++|++.|++... +|..+|.+...+|+.+...+.+++. .+..+|.++...
T Consensus 77 ~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 156 (339)
T PF00202_consen 77 DRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAAD 156 (339)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHH
T ss_pred ceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchh
Confidence 788999999999999996443 6777888899999988777766442 246677777655
Q ss_pred ---------HHHHHHhhccc-ccc---------------------------------------cccccccccCCCccccc
Q 013461 228 ---------LRNTLERVTAD-NKR---------------------------------------SNSFGVLGRSGRGLTEH 258 (442)
Q Consensus 228 ---------Le~~l~~~~~~-~~~---------------------------------------a~~~g~~G~~g~g~~~~ 258 (442)
+++.+.+.... ... ..++|++|+ .+..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~--~~a~~~ 234 (339)
T PF00202_consen 157 EEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK--FFASEH 234 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS--SSGHHH
T ss_pred hhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC--ccceec
Confidence 33333332221 110 445555443 344688
Q ss_pred cCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 013461 259 CGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNT 336 (442)
Q Consensus 259 ~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~ 336 (442)
+++.| ||+ +++|+++. +-|.+++++++.+.+.......+| +.+|+.|+++.++|+.+++.+ +.++++++.
T Consensus 235 ~gv~P---Div--~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~--~g~p~~~aaa~~~l~~~~~~~-~~~~~~~~g 306 (339)
T PF00202_consen 235 YGVDP---DIV--TFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTF--GGNPLSCAAALATLEILEEED-LLERVRELG 306 (339)
T ss_dssp HTSSS---SEE--EEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTT--TT-HHHHHHHHHHHHHHHHTT-HHHHHHHHH
T ss_pred ccccC---ccc--ccccchhhhhhcccccccchhhcccccccccccc--ccchHhhhhhhhHHHhhccHH-HHHHHHHHH
Confidence 99988 455 48999963 236688999998877554433333 458999999999999998754 889999999
Q ss_pred HHHHHhhccC
Q 013461 337 AILRTGLSDI 346 (442)
Q Consensus 337 ~~l~~~L~~~ 346 (442)
++|.+.|+++
T Consensus 307 ~~l~~~L~~l 316 (339)
T PF00202_consen 307 ERLREGLREL 316 (339)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 161
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.83 E-value=3.2e-18 Score=166.60 Aligned_cols=290 Identities=17% Similarity=0.241 Sum_probs=200.6
Q ss_pred eEEEeecC-CCCCCCCChHHHHHHHHHHHh---cCCCCCccCccccCcHHHHHHHHHHHhhhC-CC-cEEEEcch-HHHH
Q 013461 110 EVVNFASA-NYLGLIGHEKLLESCTSALEK---YGVGSCGPRGFYGTIDVHLDCEARIAKFLG-TP-DSILYSYG-LSTM 182 (442)
Q Consensus 110 ~~id~~s~-~~l~~~~~p~v~ea~~~~l~~---~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-~e-~~i~~~sG-~~a~ 182 (442)
+++||++| |.+|. +|++++++.+.++. |... ...++++.+|+++| .+ +.|+.+.| .+.+
T Consensus 23 ~~i~LssNenP~gp--~~~~~~~~~~~~~~~~rYPd~------------~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i 88 (356)
T COG0079 23 GIIKLSSNENPYGP--PPKVIEAIRAALDKLNRYPDP------------DYRELRAALAEYYGVVDPENVLVGNGSDELI 88 (356)
T ss_pred cceeecCCCCCCCC--CHHHHHHHHHHHHhhccCCCC------------cHHHHHHHHHHHhCCCCcceEEEcCChHHHH
Confidence 68999888 66664 48999999888763 4321 24799999999999 44 44554555 5888
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhcc-------cccc----------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTA-------DNKR---------- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~-------~~~~---------- 241 (442)
..++++++.+||.|++..+++..+...++..|++++.++.. |++.+.+.+....+ .++.
T Consensus 89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~ 168 (356)
T COG0079 89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELR 168 (356)
T ss_pred HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999888863 44444444333111 1111
Q ss_pred -------cccccccccCCCcccc--ccC-CCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCc
Q 013461 242 -------SNSFGVLGRSGRGLTE--HCG-VPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLP 308 (442)
Q Consensus 242 -------a~~~g~~G~~g~g~~~--~~~-v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~ 308 (442)
.+++-++.+-..-++. ... +...+..+++.||||+||..| ||+++++++++.++....+|. .+
T Consensus 169 ~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~----v~ 244 (356)
T COG0079 169 ALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFN----VS 244 (356)
T ss_pred HHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCC----CC
Confidence 1222222221100000 000 111233688999999999887 999999999999988776653 34
Q ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 309 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 309 p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
..+.+++.++++.-+...+.++++.+.++++.+.|+++ |+. +. ++..+|+.+.++. .. ...+.+. |.
T Consensus 245 ~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~-~~~~v~-pS~aNFvlv~~~~--------~~-~~~l~~~-L~ 312 (356)
T COG0079 245 SPALAAAIAALRDADYLEESVERIREERERLYAALKAL-GLFGVF-PSQANFVLVRVPD--------AE-AAALAEA-LL 312 (356)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeec-CCCCcEEEEECCC--------cc-HHHHHHH-HH
Confidence 55666677777655545567888889999999999987 444 44 4568999988743 11 2245664 55
Q ss_pred hCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 388 ~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
++||+++...... ..+..+||++. |++|.++++++|+++++.
T Consensus 313 ~~giivR~~~~~~----~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 313 KKGILVRDCSSVG----LLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred HCCEEEEeCCCCC----CCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 6699999875411 11346999997 899999999999987653
No 162
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.83 E-value=4e-18 Score=171.02 Aligned_cols=312 Identities=12% Similarity=0.060 Sum_probs=199.7
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcC-CCCCccC-ccccCcHHHHHHHHHHHhhhCC-C--cEEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYG-VGSCGPR-GFYGTIDVHLDCEARIAKFLGT-P--DSILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g-~~~~~~~-~~~g~~~~~~~le~~lA~~~g~-e--~~i~~~sG~~a~~ 183 (442)
.-|+|-++..+ .++.+++++.+.++.+. +...+.. ...-..+...++++.+|+++|. + ++++++++++++.
T Consensus 24 ~iYld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~ 99 (406)
T PRK09295 24 LAYLDSAASAQ----KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGIN 99 (406)
T ss_pred eEEEeCccccc----CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH
Confidence 35677665443 35789999999887643 2212111 1112346678999999999995 2 4555556678888
Q ss_pred hhhhh----hccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc---------
Q 013461 184 SAIPC----FCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR--------- 241 (442)
Q Consensus 184 ~ai~a----~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~--------- 241 (442)
.++.+ +.++||.|++.+..|++.. ..++..|++++.++.+ |++++++.+++.+.-...
T Consensus 100 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~ 179 (406)
T PRK09295 100 LVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGT 179 (406)
T ss_pred HHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccc
Confidence 77765 4689999999999887653 2345568888887643 677777776543221100
Q ss_pred ------------cccccccc--cCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCc------
Q 013461 242 ------------SNSFGVLG--RSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSG------ 300 (442)
Q Consensus 242 ------------a~~~g~~G--~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~------ 300 (442)
.++.-++- ..+.|.. ..++...++|+++.|++|.+|..| ||++.++++++.+.....+
T Consensus 180 ~~~~~~i~~~~~~~~~~vivD~a~~~g~~-~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~ 258 (406)
T PRK09295 180 ENPLAEMIALAHQHGAKVLVDGAQAVMHH-PVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIAT 258 (406)
T ss_pred cCCHHHHHHHHHHcCCEEEEEcccccCcc-ccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhhCCCcccCCceeee
Confidence 22221111 1111211 123333467999999999888766 8999999887765321100
Q ss_pred -------------eeccC-CCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEE
Q 013461 301 -------------YVFSA-SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLI 363 (442)
Q Consensus 301 -------------~~~s~-s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~~~i~~~~ 363 (442)
+.|.. +.+.....+..++++.+.+. +.+.++.+++.+++++.|++++++++.++ ...+++.+.
T Consensus 259 ~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~ 338 (406)
T PRK09295 259 VSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFN 338 (406)
T ss_pred eecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEE
Confidence 11222 34455556666888887642 45678888899999999988888887754 235677777
Q ss_pred ecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccc---cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 364 LEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 364 ~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~---~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
++.. + ..++.+ .|+++||.++.+..+... ....+..+|+|++..+|++|||+++++|+++..
T Consensus 339 ~~~~------~---~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 339 LGKH------H---AYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ECCc------C---HHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 6421 1 124555 477789999876543211 111134599999999999999999999998643
No 163
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=2.8e-18 Score=169.87 Aligned_cols=291 Identities=17% Similarity=0.137 Sum_probs=191.6
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcchHHH
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGLST 181 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~sG~~a 181 (442)
..|||+.|.. .++.+|.+++++.++++.-...... |.. ....+|++.+|+++ | .+++++++++.++
T Consensus 27 ~~i~l~~~~~-~~~~~~~~~~al~~~l~~~~~~~~~----Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~ 100 (368)
T PRK03317 27 VPVRLNTNEN-PYPPSPALVADIAEAVAEAAAGLNR----YPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEI 100 (368)
T ss_pred ceeEecCCCC-CCCCCHHHHHHHHHHHhhhhhhhcc----CCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHH
Confidence 4688887752 4556789999999887642111111 111 12357778888877 4 2345555666799
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc---------------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR--------------- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~--------------- 241 (442)
+..++.+++++||.|++..++|..+...++..|.+++.++.+ |++++++.++....+...
T Consensus 101 l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~ 180 (368)
T PRK03317 101 LQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLD 180 (368)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999888888888888877532 577888777542211100
Q ss_pred -------cccccc--------cccCCC-ccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCcee
Q 013461 242 -------SNSFGV--------LGRSGR-GLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYV 302 (442)
Q Consensus 242 -------a~~~g~--------~G~~g~-g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~ 302 (442)
.++.-+ ++..|. ...+..+. .+..|+++||||++|++| ||+++++++++.++.....
T Consensus 181 ~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~-- 256 (368)
T PRK03317 181 DVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLP-- 256 (368)
T ss_pred HHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCC--
Confidence 011101 111111 11111111 224688999999999878 9999999999998765432
Q ss_pred ccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE-EecCCCCCchhhHHHHHHH
Q 013461 303 FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL-ILEKSTGSMKNDLQLLEDI 381 (442)
Q Consensus 303 ~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~i 381 (442)
+ ..+++.++++.++++..+...+.+++++++++++.+.|++. |+.+.. +.++++.+ .+. + ..++
T Consensus 257 ~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~--------~---~~~~ 321 (368)
T PRK03317 257 Y--HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVAP-SDANFVLFGRFA--------D---RHAV 321 (368)
T ss_pred C--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCC-CCCcEEEEeccC--------C---HHHH
Confidence 2 34677777777787654433345667788888898989886 877654 45665444 221 1 2356
Q ss_pred HHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 382 ADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 382 ~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+. |.++||.+.+... ++.+||+++ +++|+++++++|++++..-
T Consensus 322 ~~~-l~~~Gv~v~~~~~--------~~~iRi~~~---~~~~~~~~~~~l~~~~~~~ 365 (368)
T PRK03317 322 WQG-LLDRGVLIRDVGI--------PGWLRVTIG---TPEENDAFLAALAEVLATE 365 (368)
T ss_pred HHH-HHHCCEEEEeCCC--------CCeEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 665 4456999986432 356999986 7899999999999987653
No 164
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.83 E-value=2.2e-18 Score=171.74 Aligned_cols=302 Identities=17% Similarity=0.225 Sum_probs=189.4
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----CcEEEE-cch
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILY-SYG 178 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e~~i~~-~sG 178 (442)
|.+++||++++. .+..++.+.+++.+.+..... ..+....|. .+|++.+|+++ |. ++.+++ +++
T Consensus 30 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~ 102 (385)
T PRK09276 30 GVDVISLGIGDP-DLPTPDHIIEAMCKAVEDPEN--HQYPSYEGM----LEFRKAVADWYKRRFGVELDPETEVISLIGS 102 (385)
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCc----HHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 456899988763 455578899999888865211 111112233 45555566555 42 233444 555
Q ss_pred HHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc-------cccc---
Q 013461 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA-------DNKR--- 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~-------~~~~--- 241 (442)
++++..++.+++++||.|++++++|+.+...++..|.+++.++.. |++++++.+...++ .++.
T Consensus 103 ~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~ 182 (385)
T PRK09276 103 KEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAV 182 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCC
Confidence 699999999999999999999999998888888999998877642 34455444432111 1111
Q ss_pred --------------cccccccccC--------CCccccccCCCC-CceeEEEEeccccccCCC---cEEEcCHHhHHHHH
Q 013461 242 --------------SNSFGVLGRS--------GRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 295 (442)
Q Consensus 242 --------------a~~~g~~G~~--------g~g~~~~~~v~~-~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~ 295 (442)
.|++-++-+. +........++. .+.+|+++||||.+|+.| ||+++++++++.++
T Consensus 183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~ 262 (385)
T PRK09276 183 ADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLG 262 (385)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHH
Confidence 2222222111 111111111111 246788999999999887 99999999999887
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
..... . +.+.++....++.++++..+ ..+..+++++++++++.+.|++. |+++..+..+.++++.++...
T Consensus 263 ~~~~~-~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~v~~~~~~------ 333 (385)
T PRK09276 263 KVKSN-V-DSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFYVWAPVPKGY------ 333 (385)
T ss_pred HHHhh-c-cCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEECCCCC------
Confidence 65322 2 22234445555555654221 12456778888899999999887 777765445555777764321
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
...++++.+++++||.+.++..+... .+..+||+++ .+++++++++++|++
T Consensus 334 --~~~~l~~~ll~~~gi~v~~g~~f~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 334 --TSAEFATLLLDKAGVVVTPGNGFGEY---GEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred --CHHHHHHHHHHhCCEEECCchhhCCC---CCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 12367777676679999998654321 1246999997 477888888887754
No 165
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2.6e-18 Score=170.82 Aligned_cols=307 Identities=15% Similarity=0.146 Sum_probs=197.8
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSA 185 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~a 185 (442)
+.++|||+.+.. .++.+|.+.+++.+++..... ..|+......++++.+|+++|. +++++++++++++..+
T Consensus 27 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~ 99 (380)
T PRK06225 27 DKEMIWMGQNTN-HLGPHEEVREAMIRCIEEGEY------CKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLV 99 (380)
T ss_pred cCCeEEccCCCC-CCCCCHHHHHHHHHHHhcCCC------CCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHH
Confidence 357899986642 445689999999999875211 1233334467899999999985 4678888889999999
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhcccccc----------------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--------NDMDSLRNTLERVTADNKR---------------- 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~--------~d~~~Le~~l~~~~~~~~~---------------- 241 (442)
+.+++++||.|++.++.|......+...|+++++++. .|++++++.+...+.....
T Consensus 100 ~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~ 179 (380)
T PRK06225 100 MRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEI 179 (380)
T ss_pred HHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHH
Confidence 9999999999999999888777778888999887763 1456666655432211000
Q ss_pred --------cccccccccCCC-----ccccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccC
Q 013461 242 --------SNSFGVLGRSGR-----GLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSA 305 (442)
Q Consensus 242 --------a~~~g~~G~~g~-----g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~ 305 (442)
.|++-++-+... +......+. .+.++++.||||.+|+.| ||+++++++++.++..... +.
T Consensus 180 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~---~~ 255 (380)
T PRK06225 180 KEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVIN---DL 255 (380)
T ss_pred HHHHHHHHHCCcEEEEehhHHHHhccCCchhhcC-CCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhc---cc
Confidence 111111111000 000001112 245788999999998776 9999999999987754311 12
Q ss_pred CCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 306 SLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 306 s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
+.+.+.++++.++++...+ .+..++.++++.+.+.+.|++++++.+. .++.++++++.+.... . ...++.+
T Consensus 256 ~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~----~---~~~~l~~ 328 (380)
T PRK06225 256 GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG----I---DPEDLVE 328 (380)
T ss_pred CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc----C---CHHHHHH
Confidence 2355555555556543221 1334555667778888888876564332 2346778887774311 0 1235676
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+. ++||.+.++..+....+ +..+|++++. +++|+++++++|+++++++
T Consensus 329 ~l~-~~gi~v~~g~~~~~~~~--~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 329 YLL-ERKIFVRQGTYTSKRFG--DRYIRVSFSI--PREQVEVFCEEFPDVVETL 377 (380)
T ss_pred HHH-HCCEEEcCCcccCcCCC--CceEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 544 56999998754321111 3469999874 7999999999999998765
No 166
>PRK08175 aminotransferase; Validated
Probab=99.83 E-value=5.7e-18 Score=169.24 Aligned_cols=309 Identities=15% Similarity=0.133 Sum_probs=194.3
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----C-cEEEEcch
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----P-DSILYSYG 178 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e-~~i~~~sG 178 (442)
|++++||++++..+ ..++.+.+++.+.+.... ..++....|. .+|++.+|+++ |. + +.++++++
T Consensus 28 ~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~----~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~ 100 (395)
T PRK08175 28 GEDIIDFSMGNPDG-PTPPHIVEKLCEVAQRPD--THGYSTSRGI----PRLRRAISRWYQDRYDVDIDPESEAIVTIGS 100 (395)
T ss_pred CCCeEEcCCCCCCC-CCCHHHHHHHHHHHhCCC--cCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 56789998776433 345668888777764311 1111112233 45555555553 42 3 34555555
Q ss_pred HHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhcccccc-------------
Q 013461 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTADNKR------------- 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~~~~~------------- 241 (442)
++++..++.+++++||.|++++++|+.....++..|++++.++.+ +.+++++.++...+..+.
T Consensus 101 ~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~ 180 (395)
T PRK08175 101 KEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQC 180 (395)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence 588888888999999999999999998888888889998877643 467888877643211111
Q ss_pred --------------cccccccccC--------CCccccccCCC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHHH
Q 013461 242 --------------SNSFGVLGRS--------GRGLTEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 295 (442)
Q Consensus 242 --------------a~~~g~~G~~--------g~g~~~~~~v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~ 295 (442)
.|++-++-+. +........++ ..+..++++||||++|++| ||+++++++++.+.
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~ 260 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALA 260 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHH
Confidence 1222111111 11001111111 1245688999999998776 99999999999886
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
.......++. +...+.++.++++..+ ....+++.++++.+++.+.|++. |+.+..+..++++|+.++..... .
T Consensus 261 ~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~~~--~- 334 (395)
T PRK08175 261 RIKSYHDYGT--FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPYAA--M- 334 (395)
T ss_pred HHHhhcccCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCcccCC--C-
Confidence 5432222222 3334444455554322 12456778888999999999887 77765555788889888542110 0
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
...+++++++++.||.|.++..+... .+..+||++. .+++++++++++|++++.+
T Consensus 335 --~~~~~~~~l~~~~gv~v~p~~~f~~~---~~~~lRis~~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 335 --GSLEFAKKLLNEAKVCVSPGIGFGDY---GDTHVRFALI--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred --CHHHHHHHHHHhCCEEEeCchhhCcC---CCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 12467776677789999987654311 1246999996 4789999999999988765
No 167
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.83 E-value=4.8e-18 Score=170.30 Aligned_cols=312 Identities=17% Similarity=0.140 Sum_probs=197.4
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHh-cCCCCCccCc-cccCcHHHHHHHHHHHhhhCCC---cEEEEcchHHHHHh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEK-YGVGSCGPRG-FYGTIDVHLDCEARIAKFLGTP---DSILYSYGLSTMFS 184 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~-~g~~~~~~~~-~~g~~~~~~~le~~lA~~~g~e---~~i~~~sG~~a~~~ 184 (442)
-|+|.++... .++.+.+++.+.++. ++..+++... ..-..+..+++++.+|+++|.+ ++++++++++++..
T Consensus 20 ~yld~~~~~~----~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~ 95 (403)
T TIGR01979 20 VYLDSAATSQ----KPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINL 95 (403)
T ss_pred EEEeCccccC----CCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHH
Confidence 3566554332 357889999888765 3333322211 1112356779999999999965 45666666788777
Q ss_pred hhhhh----ccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc----------
Q 013461 185 AIPCF----CKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR---------- 241 (442)
Q Consensus 185 ai~a~----~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~---------- 241 (442)
++.++ .++||.|+++++.|.+.. ......|++++.++.+ |++++++.+.+.+.-...
T Consensus 96 ~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~ 175 (403)
T TIGR01979 96 VAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTV 175 (403)
T ss_pred HHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEccccccccc
Confidence 77664 588999999999988754 3445678888777642 567777766543221100
Q ss_pred -----------cccccccc--cCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCC--------
Q 013461 242 -----------SNSFGVLG--RSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSS-------- 299 (442)
Q Consensus 242 -----------a~~~g~~G--~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~-------- 299 (442)
.|+.-++- ..+.|.. ..++...++|+++.|++|.+|..| |++++++++++.+.....
T Consensus 176 ~~~~~i~~~~~~~~~~~ivD~a~~~g~~-~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~ 254 (403)
T TIGR01979 176 NPVEEIAKLAHQVGAKVLVDGAQAVPHM-PVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMPPFLGGGEMIAEV 254 (403)
T ss_pred CCHHHHHHHHHHcCCEEEEEchhhcCcc-ccCccccCCCEEEEecccccCCCCceEEEEchHHHhcCCCeecCCCceeec
Confidence 22221111 1111211 123333457999999999998766 899999888776542110
Q ss_pred ----------ceecc-CCCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCC----CCCEEEE
Q 013461 300 ----------GYVFS-ASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNP----ESPIVFL 362 (442)
Q Consensus 300 ----------~~~~s-~s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~----~~~i~~~ 362 (442)
++.|. ++.+...++++.++++.+.+ .+.+.++..++.+++++.|++++++++..+. .++++.+
T Consensus 255 ~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~ 334 (403)
T TIGR01979 255 SFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISF 334 (403)
T ss_pred ccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEE
Confidence 01122 23344445556678877754 2457788889999999999888788886542 2678777
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccc---cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 363 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~---~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.+... + ..++.+ .|+++||.++.+..+..+ ....+..+|++++..+|++|+++++++|+++++.
T Consensus 335 ~~~~~------~---~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 335 NVEGV------H---PHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred EeCCc------C---HHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 76321 1 124555 577789999875432110 0112356999999999999999999999987654
No 168
>PLN02187 rooty/superroot1
Probab=99.83 E-value=3e-18 Score=173.88 Aligned_cols=317 Identities=13% Similarity=0.079 Sum_probs=198.9
Q ss_pred CeeEEEeecCCC--CC-CCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEEEEc
Q 013461 108 GKEVVNFASANY--LG-LIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYS 176 (442)
Q Consensus 108 G~~~id~~s~~~--l~-~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i~~~ 176 (442)
++++|+|+.++. .. +...+++.+++.+.++. +... .|+......++++.+|++++ .+++++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-~~~~-----~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-GKGN-----SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-CCCC-----CCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 678999987643 22 34567899999988875 2211 23333345677788887763 24666777
Q ss_pred chHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhccc-------ccc-
Q 013461 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----DMDSLRNTLERVTAD-------NKR- 241 (442)
Q Consensus 177 sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~---~----d~~~Le~~l~~~~~~-------~~~- 241 (442)
++++++..++.+++++||.|+++.++|+.+...+...|.+++.++. + |++++++.++..+.. ++.
T Consensus 139 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG 218 (462)
T PLN02187 139 GCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCG 218 (462)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCC
Confidence 7789999999999999999999999999988888889999887753 1 567777665432211 110
Q ss_pred ----------------cccccccccCCC-c-------cccccCCCCCceeEEEEeccccccCCC---cEEEcC-H-Hh--
Q 013461 242 ----------------SNSFGVLGRSGR-G-------LTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS-A-RV-- 290 (442)
Q Consensus 242 ----------------a~~~g~~G~~g~-g-------~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~-~-~~-- 290 (442)
.|++-++-+.-. . ......+......|+++||||+++++| ||++++ + .+
T Consensus 219 ~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~ 298 (462)
T PLN02187 219 NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFE 298 (462)
T ss_pred CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHH
Confidence 222222211100 0 000001111223688999999998877 999873 3 22
Q ss_pred -HHHHHhhCCceeccCCCcHHHHHHHHHHHHH-H-hcChHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEEEecC
Q 013461 291 -VDHQRLSSSGYVFSASLPPYLASAAITAIDV-L-EENPDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFLILEK 366 (442)
Q Consensus 291 -i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~-l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~~~~i~~~~~~~ 366 (442)
++.+......+..+++.+.+..+++.++++. . +...+.++.++++++++.+.|+++++.... .+..+.++++.+..
T Consensus 299 ~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~ 378 (462)
T PLN02187 299 TTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLEL 378 (462)
T ss_pred HHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecCh
Confidence 3344333233333333456666666666652 1 122456788889999999999887444322 23345677776632
Q ss_pred CCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 367 STGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 367 ~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
.....-.+ ..+++.++++++||.+.++..+.. ++.+||++.. .++.+++++++|.+++++..++
T Consensus 379 ~~~~~~~~---~~~~~~~ll~~~gV~v~pG~~fg~-----~~~iRis~~~--~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 379 SLMDNIKD---DIDFCVKLAREENLVFLPGDALGL-----KNWMRITIGV--EAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred hhCCCCCC---HHHHHHHHHhhCCEEEECccccCC-----CCeEEEEeCC--CHHHHHHHHHHHHHHHHHhhhc
Confidence 10000001 224555566778999999876532 3569999985 6899999999999999776544
No 169
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.83 E-value=1.3e-18 Score=175.82 Aligned_cols=300 Identities=14% Similarity=0.122 Sum_probs=196.0
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC----CC-cEEEEcchHHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG----TP-DSILYSYGLSTMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g----~e-~~i~~~sG~~a~~ 183 (442)
...+||++++. .....|.+.+++.+..... ..|+......+|++.++++++ .+ ++++++++.+++.
T Consensus 85 ~~~i~L~~g~p-~~~~~p~~~~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 85 TPLHDLAGGNP-DPQRLPDLSRYFARLSRTP--------RLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIE 155 (431)
T ss_pred chhhhhhcCCC-ChhHhHHHHHHHHHhhhhh--------hhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHH
Confidence 35678876642 3333456667666654321 123333334578888888865 23 5666666679999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhccc--------ccc----------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----DMDSLRNTLERVTAD--------NKR---------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d~~~Le~~l~~~~~~--------~~~---------- 241 (442)
.++.+++++||.|++++|+|..+...++..|++++.++.+ |+++|++.++...+. ++.
T Consensus 156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~ 235 (431)
T PRK15481 156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAA 235 (431)
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHH
Confidence 9999999999999999999999999999999999888653 567787776542211 110
Q ss_pred -------cc-cccccccCCCc-cc--cccC-CC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccC
Q 013461 242 -------SN-SFGVLGRSGRG-LT--EHCG-VP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSA 305 (442)
Q Consensus 242 -------a~-~~g~~G~~g~g-~~--~~~~-v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~ 305 (442)
.| ++-++-+.-.+ +. .+.. +. ..+..|+++||||++| +| ||+++++++++.+........+
T Consensus 236 ~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~-- 312 (431)
T PRK15481 236 ALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQ-- 312 (431)
T ss_pred HHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhcccc--
Confidence 23 33232221111 00 0000 10 1245799999999998 66 9999999999988654322222
Q ss_pred CCcHHHHHHHHHHHHHHh---cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHH
Q 013461 306 SLPPYLASAAITAIDVLE---ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIA 382 (442)
Q Consensus 306 s~~p~~aaaa~aal~~l~---~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~ 382 (442)
+.+.+.+.++.++|+.-+ ...+.++.++++++.+.+.|++. ++.+..+..+.++|+.++.. ..+++
T Consensus 313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~----------~~~~~ 381 (431)
T PRK15481 313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD----------SQATA 381 (431)
T ss_pred CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC----------HHHHH
Confidence 245666666666665321 12356788999999999999886 77764456777888877421 23566
Q ss_pred HHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 383 DWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 383 ~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
+.+ .++||.+.++..+..... ...+||+++. .+++++++++++|++++.
T Consensus 382 ~~l-~~~gV~v~pg~~f~~~~~--~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 382 LTL-AKSGWLVREGEAFGVSAP--SHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred HHH-HHCCcEEecCCccccCCC--CCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 654 457999999876532211 2469999986 578999999999998763
No 170
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.83 E-value=8.9e-18 Score=168.24 Aligned_cols=314 Identities=13% Similarity=0.142 Sum_probs=192.9
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----C-cEEEEcchHHH
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----P-DSILYSYGLST 181 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e-~~i~~~sG~~a 181 (442)
.|.+++||++++.. ...++.+.+++.+.+... ...++....|..+++..+++.+.+.+|. + ++++++++.++
T Consensus 31 ~~~~~~~l~~g~p~-~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMGNPD-GPTPQHIIDKLCESAQKP--KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCcCCC-CCCCHHHHHHHHHHhcCC--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 35678999776543 323456777777665431 1111222334444444444444444462 3 35556666799
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHH----HHHHHHhhcccccc---------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDS----LRNTLERVTADNKR--------- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~----Le~~l~~~~~~~~~--------- 241 (442)
+..++.+++++||.|++++++|+.+...+...|++++.++.+ |+++ +++.+++...+.+.
T Consensus 108 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NP 187 (403)
T PRK08636 108 YVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNP 187 (403)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCC
Confidence 999999999999999999999999999999999999877531 3443 45555432221111
Q ss_pred ------------------cccccccccCCCc--------cccccCCCC-CceeEEEEeccccccCCC---cEEEcCHHhH
Q 013461 242 ------------------SNSFGVLGRSGRG--------LTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTGSARVV 291 (442)
Q Consensus 242 ------------------a~~~g~~G~~g~g--------~~~~~~v~~-~~~diii~S~sK~lg~~G---G~v~g~~~~i 291 (442)
.|++-++-+.-.+ ......++. .++.|.++||||++|++| ||++++++++
T Consensus 188 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li 267 (403)
T PRK08636 188 TTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLV 267 (403)
T ss_pred CCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHH
Confidence 2232222111110 011112221 245677899999998776 9999999999
Q ss_pred HHHHhhCCceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCC
Q 013461 292 DHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGS 370 (442)
Q Consensus 292 ~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~ 370 (442)
+.+........++.+ ++.+ .++..+++..+ ...++++.++++.+.+.+.|.+. |+.+..+..+.++|+.+++....
T Consensus 268 ~~~~~~~~~~~~~~~-~~~q-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~~~ 344 (403)
T PRK08636 268 GALKKIKSWLDYGMF-TPIQ-VAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIPEPARH 344 (403)
T ss_pred HHHHHHHHHhcccCC-hHHH-HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECCCccCC
Confidence 887654322122221 2333 33333443111 12346677888889999999886 77765555777888887532110
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 371 MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 371 ~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
. ...++++.++++.||.+.++..+... .++.+||++. .+++++++++++|+++++.
T Consensus 345 ~-----~~~~l~~~ll~~~gV~v~pg~~f~~~---~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 345 L-----GSLEFSKQLLTEAKVAVSPGIGFGEY---GDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred C-----CHHHHHHHHHHhCCEEEecchhhCcC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 0 12357776677789999998665321 1256999997 5899999999999988865
No 171
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.83 E-value=2.3e-18 Score=172.24 Aligned_cols=304 Identities=14% Similarity=0.103 Sum_probs=190.1
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCc-cCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCG-PRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAI 186 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~-~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai 186 (442)
-|+|.++... .++.+++++.+.+..++....+ +....+..+.++++++.+++++|.+ ++++.+++++++..++
T Consensus 19 ~yl~~~~~~~----~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~ 94 (397)
T TIGR01976 19 VFFDNPAGTQ----IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLS 94 (397)
T ss_pred EEecCCccCC----CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHH
Confidence 4565544321 4689999999999875432222 1112234567899999999999964 3555566667766666
Q ss_pred hhh---ccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCC------CHHHHHHHHHhhcccccc------------
Q 013461 187 PCF---CKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKR------------ 241 (442)
Q Consensus 187 ~a~---~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~------------ 241 (442)
.++ .++||.|+++++.|.+.. ..++..|++++.++.+ |++++++.+.+.+.....
T Consensus 95 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~ 174 (397)
T TIGR01976 95 RAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVD 174 (397)
T ss_pred HHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCC
Confidence 554 689999999999998764 3346678888877643 567777776542221110
Q ss_pred ---------ccccccccc--CCCccccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCcee-------c
Q 013461 242 ---------SNSFGVLGR--SGRGLTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYV-------F 303 (442)
Q Consensus 242 ---------a~~~g~~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~-------~ 303 (442)
.|+.-++-+ +..|. ...++...++|++++|++|.+|...||+++++++++.+......+. |
T Consensus 175 ~~~i~~~~~~~~~~~ivD~a~~~~~-~~~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 253 (397)
T TIGR01976 175 LAAITELVHAAGALVVVDAVHYAPH-GLIDVQATGADFLTCSAYKFFGPHMGILWGRPELLMNLPPYKLTFSYDTGPERF 253 (397)
T ss_pred HHHHHHHHHHcCCEEEEehhhhccc-cCCCHHHcCCCEEEEechhhcCCceEEEEEcHHHHhhCCCccccCccCCCcchh
Confidence 222211111 11111 1122222357899999999999878999999998887654322222 2
Q ss_pred cC-CCcHHHHHHHHHHHHHHhcC----------------hHHHHHHHHHHHHHHHhhccCCCceeecC----CCCCEEEE
Q 013461 304 SA-SLPPYLASAAITAIDVLEEN----------------PDLITKLKKNTAILRTGLSDIHGLSIASN----PESPIVFL 362 (442)
Q Consensus 304 s~-s~~p~~aaaa~aal~~l~~~----------------~~~~~~l~~~~~~l~~~L~~~~g~~~~~~----~~~~i~~~ 362 (442)
.. +.+...+++..++++.+.+. +...++..++.+++++.|++++++++.++ ..++++.+
T Consensus 254 ~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 333 (397)
T TIGR01976 254 ELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSF 333 (397)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEE
Confidence 22 23333444455677766432 23455667788889999988766877643 25778877
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcc--------cccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 363 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM--------LDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~--------~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
.+... + ..++.++ |+++||.++.+..+. ++.. ...+|++++..+|++|+++++++|
T Consensus 334 ~~~~~------~---~~~l~~~-L~~~gI~v~~~~~~~~~~~~~~~~~~~--~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 334 TVHGL------P---PQRVVRR-LADQGIDAWAGHFYAVRLLRRLGLNDE--GGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EeCCc------C---HHHHHHH-HHHCCeEEEeCccchHHHHHHhCCCCC--CCeEEEEeeccCCHHHHHHHHHhC
Confidence 66321 1 2356665 666799998764321 1100 235999999999999999999864
No 172
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.83 E-value=3e-18 Score=163.78 Aligned_cols=304 Identities=19% Similarity=0.170 Sum_probs=201.2
Q ss_pred ChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhh--hc----cCCCE
Q 013461 125 HEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPC--FC----KKGDL 195 (442)
Q Consensus 125 ~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a--~~----~~gd~ 195 (442)
+|++++++...+.. ||+.++-+....-.....++.++.+|+.+|.+ +.+|+++|++++..+|.. .. ++|.+
T Consensus 14 ~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~H 93 (386)
T COG1104 14 DPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKH 93 (386)
T ss_pred CHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCe
Confidence 69999999999987 58877755543335678899999999999953 567777788999888875 32 36889
Q ss_pred EEeCCCchHHHHHHHHhc---CCeEEEecCC-----CHHHHHHHHHhhcccccccc---ccccccc--------CCCccc
Q 013461 196 IVADEGVHWGIQNGLYLS---RSTVVYFKHN-----DMDSLRNTLERVTADNKRSN---SFGVLGR--------SGRGLT 256 (442)
Q Consensus 196 Vi~~~~~h~s~~~~~~l~---g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~a~---~~g~~G~--------~g~g~~ 256 (442)
|++....|.++.+.++.. |..+.+.+.+ |+++|++.|+..+.....+| .+|++-+ ..+|+.
T Consensus 94 IIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~ 173 (386)
T COG1104 94 IITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGIL 173 (386)
T ss_pred EEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCe
Confidence 999999999999988765 7788877765 68888888876544322211 1222100 001111
Q ss_pred ---------cccCCCCC--ceeEEEEeccccccCCC-cEEEcCHHhH-HHHHhhC-Cce-eccCCCcHHHHHHHHHHHHH
Q 013461 257 ---------EHCGVPVD--KIDIVTAAMGHALATEG-GFCTGSARVV-DHQRLSS-SGY-VFSASLPPYLASAAITAIDV 321 (442)
Q Consensus 257 ---------~~~~v~~~--~~diii~S~sK~lg~~G-G~v~g~~~~i-~~l~~~~-~~~-~~s~s~~p~~aaaa~aal~~ 321 (442)
....++.. .+|+++.|-+|..|.-| |+++.++.+. +.+...+ +.. .-+++.+....++..+|++.
T Consensus 174 fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~ 253 (386)
T COG1104 174 FHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEI 253 (386)
T ss_pred EEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHH
Confidence 11223333 38999999999999876 7777655432 2222222 111 12334443333333344544
Q ss_pred H-hcChHHHHHHHHHHHHHHHhhccC-CCceeecCC--C-CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeec
Q 013461 322 L-EENPDLITKLKKNTAILRTGLSDI-HGLSIASNP--E-SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTS 396 (442)
Q Consensus 322 l-~~~~~~~~~l~~~~~~l~~~L~~~-~g~~~~~~~--~-~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~ 396 (442)
. ++.+....++++++++|.+.|.+. |++.+.+.+ . .+++.+.++.-.+ +.+. ..|+.+||+++.+
T Consensus 254 a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~g---------E~ll-~~L~~~gI~vStG 323 (386)
T COG1104 254 AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEG---------ESLL-LALDLAGIAVSTG 323 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcH---------HHHH-HhccccCeEEecc
Confidence 3 345667888999999999999875 677766542 2 3466666643221 1233 3577789999988
Q ss_pred cCcccccCC--------------CCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 397 KRSMLDKCR--------------LPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 397 ~~~~~~~~~--------------~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+.+...... ....||+|++..+|++|+++++++++++++++.
T Consensus 324 SACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr 379 (386)
T COG1104 324 SACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLR 379 (386)
T ss_pred ccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 876532211 123599999999999999999999999988753
No 173
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.83 E-value=7.9e-18 Score=168.30 Aligned_cols=307 Identities=13% Similarity=0.121 Sum_probs=193.0
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-----C-cEEEEcchHH
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----P-DSILYSYGLS 180 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~-----e-~~i~~~sG~~ 180 (442)
.|+++|||+.++. .+..++.+.+++.+.+... .. +....|..++++.+.+.+.+.+|. + ++++++++++
T Consensus 27 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~-~~---Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~ 101 (396)
T PRK09147 27 ADLPPISLSIGEP-KHPTPAFIKDALAANLDGL-AS---YPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSRE 101 (396)
T ss_pred cCCCeEecCCCCC-CCCCCHHHHHHHHHHhhhh-cC---CCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHH
Confidence 3788999987763 4555678888888776431 11 112234444444444444444463 2 3455566679
Q ss_pred HHHhhhhhhccC---CCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc-------cccc--
Q 013461 181 TMFSAIPCFCKK---GDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA-------DNKR-- 241 (442)
Q Consensus 181 a~~~ai~a~~~~---gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~-------~~~~-- 241 (442)
++..++.+++++ ||.|+++.++|..+...++..|++++.++.+ |++++++.+.+..+ .++.
T Consensus 102 al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~ 181 (396)
T PRK09147 102 ALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGA 181 (396)
T ss_pred HHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCc
Confidence 999999999999 9999999999998888888999999888642 45667665533211 1111
Q ss_pred ---------------cccccccccCCCccc------------c---ccCCCCCceeEEEEeccccccCCC---cEEEcCH
Q 013461 242 ---------------SNSFGVLGRSGRGLT------------E---HCGVPVDKIDIVTAAMGHALATEG---GFCTGSA 288 (442)
Q Consensus 242 ---------------a~~~g~~G~~g~g~~------------~---~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~ 288 (442)
.|++-++-+.-.+.. . ..+.+..+..|+++||||++|++| ||+++++
T Consensus 182 ~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~ 261 (396)
T PRK09147 182 VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA 261 (396)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCH
Confidence 223222211111000 0 001011245799999999998777 9999999
Q ss_pred HhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 013461 289 RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 368 (442)
Q Consensus 289 ~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~ 368 (442)
++++.+...... .+.+.+++.+.++.+++...+...+.++.++++++.+.+.|++. +.+..+..+.++|+.++.
T Consensus 262 ~l~~~~~~~~~~--~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~~-- 335 (396)
T PRK09147 262 ALLKKFLLYRTY--HGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVPG-- 335 (396)
T ss_pred HHHHHHHHHhhh--cccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECCC--
Confidence 999887654321 22234555555555555322222446777888888888888763 444435567788887741
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc---CCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 369 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK---CRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 369 ~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~---~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
+ ..++++.+++++||.+.++..+.... ...++.+||+++. +++++++++++|++++
T Consensus 336 -----~---~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 336 -----D---DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred -----C---HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 1 13567766667799999987653211 1113469999985 6899999999998865
No 174
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.83 E-value=9.1e-18 Score=167.70 Aligned_cols=302 Identities=15% Similarity=0.201 Sum_probs=186.8
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----Cc-EEEEcch
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PD-SILYSYG 178 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e~-~i~~~sG 178 (442)
|+++|||+.++... ..++.+.+++.+.+.... .. .|+......+|++.+|+++ |. ++ +++++++
T Consensus 34 g~~~i~l~~g~p~~-~~p~~~~~~~~~~~~~~~--~~----~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~ 106 (394)
T PRK05942 34 GLDLIDLGMGNPDG-AAPQPVIEAAIAALADPQ--NH----GYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGS 106 (394)
T ss_pred CCCeEEcCCCCCCC-CCCHHHHHHHHHHHhCCC--Cc----cCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccCh
Confidence 56789998776433 345678888777765321 11 1222222346666666655 42 33 4455666
Q ss_pred HHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcc-------cccc---
Q 013461 179 LSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTA-------DNKR--- 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~-------~~~~--- 241 (442)
++++..++.+++++||.|+++.++|+.+...+...|.+++.++.+ |++++++.+...++ .++.
T Consensus 107 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~ 186 (394)
T PRK05942 107 KEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTAT 186 (394)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCc
Confidence 799999999999999999999999999888888889998887642 46677665543211 1110
Q ss_pred --------------cccccccccCCCc--------cccccCCC-CCceeEEEEeccccccCCC---cEEEcCHHhHHHHH
Q 013461 242 --------------SNSFGVLGRSGRG--------LTEHCGVP-VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQR 295 (442)
Q Consensus 242 --------------a~~~g~~G~~g~g--------~~~~~~v~-~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~ 295 (442)
.|++-++-+...+ ......++ ..+.+|+++||||++|++| ||+++++++++.++
T Consensus 187 ~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~ 266 (394)
T PRK05942 187 APREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLR 266 (394)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHH
Confidence 2222222111100 00111121 1345788999999998777 99999999999887
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
.......++ .+.....++.++++..++ .++.+++++++.+++.+.|++. |+.+..+..+.++|+.++... +
T Consensus 267 ~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~~~~~-----~ 338 (394)
T PRK05942 267 TLKTNLDYG--IFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPCPVGM-----G 338 (394)
T ss_pred HHHhhcccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEECCCCC-----C
Confidence 653322222 244444555566653322 2456788889999999999886 777664434446777774321 1
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
..+++.++++++||.+.++..+... .+..+|++++. +.+.+.+++++|.+
T Consensus 339 ---~~~~~~~~l~~~gV~v~~g~~f~~~---~~~~iRis~~~--~~~~l~~~l~~l~~ 388 (394)
T PRK05942 339 ---STDFALNVLQKTGVVVTPGNAFGEG---GEGYVRISLIA--DCDRLGEALDRLKQ 388 (394)
T ss_pred ---HHHHHHHHHHHCCEEEeCChhhCcC---CCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 1245666677789999987654311 13569999973 45666666666654
No 175
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.83 E-value=2.8e-18 Score=169.43 Aligned_cols=292 Identities=18% Similarity=0.165 Sum_probs=185.9
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchH-HHH
Q 013461 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGL-STM 182 (442)
Q Consensus 107 ~G~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~-~a~ 182 (442)
+++++|||++| ++++ .+|.+++++.+.+..+. .+ +. ..+.++++.+|+++|.+ +.+++++|+ +++
T Consensus 32 ~~~~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~-~y-------~~-~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i 100 (361)
T PRK00950 32 DPESIIKLGSNENPLG--PSPKAVEAIEKELSKIH-RY-------PE-PDAPELREALSKYTGVPVENIIVGGDGMDEVI 100 (361)
T ss_pred CccceEEccCCCCCCC--CCHHHHHHHHHHHHhhc-CC-------CC-CCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHH
Confidence 56789999887 5555 57899999988876531 11 11 12488999999999963 455546665 677
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhccccc-------c---------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNK-------R--------- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~-------~--------- 241 (442)
..++.+++++||.|+++.+.|..+...++..|.+++.++.+ |++++++.+...+.-.. .
T Consensus 101 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l 180 (361)
T PRK00950 101 DTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDI 180 (361)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHH
Confidence 88888888999999999999988888888889998887632 45666665543211100 0
Q ss_pred -----ccccccc-ccCCCcccc--ccCC-CCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcH
Q 013461 242 -----SNSFGVL-GRSGRGLTE--HCGV-PVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPP 309 (442)
Q Consensus 242 -----a~~~g~~-G~~g~g~~~--~~~v-~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p 309 (442)
.++.-++ .+...++.. .... ...+..++++||||++|++| ||+++++++++.++.....+ + .++
T Consensus 181 ~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~--~--~~~ 256 (361)
T PRK00950 181 RKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF--S--LTR 256 (361)
T ss_pred HHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCC--C--CCH
Confidence 1111111 110000100 0000 01134688999999999877 99999999998887654332 2 355
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC
Q 013461 310 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKED 389 (442)
Q Consensus 310 ~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~ 389 (442)
+..+++.++++..+..++.+++++++++++.+.|. +++. ++.++++++.+... + ..++++.++ ++
T Consensus 257 ~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~------~---~~~~~~~l~-~~ 321 (361)
T PRK00950 257 LSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPM------T---AKEFCEELL-KR 321 (361)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCC------C---HHHHHHHHH-HC
Confidence 56556666664322223345566666666766664 3443 35677888877211 1 236777655 56
Q ss_pred CEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 390 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 390 GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
||.+.++..+.. ..+..+|++++ +++|+++++++|++++
T Consensus 322 gv~v~~~~~f~~---~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 322 GVIVRDCTSFRG---LGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred CEEEeeCCccCC---CCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 999988654321 01346999997 7899999999998864
No 176
>PRK08363 alanine aminotransferase; Validated
Probab=99.83 E-value=6.4e-18 Score=169.08 Aligned_cols=314 Identities=15% Similarity=0.118 Sum_probs=195.0
Q ss_pred CCeeEEEeecCCCC--CCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEc
Q 013461 107 SGKEVVNFASANYL--GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYS 176 (442)
Q Consensus 107 ~G~~~id~~s~~~l--~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~ 176 (442)
.|+.+|||+.+... ++..++.+.+++.+.++.... .|+......+|++.+|+++ | .+++++++
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 100 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHN-------YYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTA 100 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCC-------CCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeC
Confidence 36789999888753 677788999999988865211 1222233467777777776 3 23567777
Q ss_pred chHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEec-C------CCHHHHHHHHHhhcccc-------cc-
Q 013461 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK-H------NDMDSLRNTLERVTADN-------KR- 241 (442)
Q Consensus 177 sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~-~------~d~~~Le~~l~~~~~~~-------~~- 241 (442)
++++++..++.+++++||.|+++.++|..+...++..|.+++.++ . .|.+++++.+...++.. +.
T Consensus 101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG 180 (398)
T PRK08363 101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTG 180 (398)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCC
Confidence 778999999999999999999999999999988888888877762 2 24556665553321100 00
Q ss_pred ----------------cccccccccCCCc-c------ccccCCCCCceeEEEEeccccccCCC---cEEEc--CHHhHHH
Q 013461 242 ----------------SNSFGVLGRSGRG-L------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTG--SARVVDH 293 (442)
Q Consensus 242 ----------------a~~~g~~G~~g~g-~------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g--~~~~i~~ 293 (442)
.|++-++-+.-.+ + .....+...+..++++||||+++++| ||+++ ++++++.
T Consensus 181 ~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~ 260 (398)
T PRK08363 181 ALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAE 260 (398)
T ss_pred cCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHH
Confidence 1222121111000 0 00011222334688999999998777 99886 7766665
Q ss_pred HHhhCCce-eccCCCcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCc
Q 013461 294 QRLSSSGY-VFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSM 371 (442)
Q Consensus 294 l~~~~~~~-~~s~s~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 371 (442)
++.....+ ....+.+++...++.+++... +...+.+++++++++++.+.|.+++++.+..+..+.++|+.+.....
T Consensus 261 l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~-- 338 (398)
T PRK08363 261 VREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPW-- 338 (398)
T ss_pred HHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCC--
Confidence 54321110 011123444444455555421 12235678888999999999988767776544344445555642100
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 372 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 372 ~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
.+ ..+++.++|+++||.+.++..+... .+..+||++. .+++++++++++|++++++.+
T Consensus 339 -~~---~~~~~~~~l~~~gV~v~~g~~f~~~---~~~~iRis~~--~~~~~l~~~l~~l~~~~~~~~ 396 (398)
T PRK08363 339 -KD---DKEFVLDVLHEAHVLFVHGSGFGEY---GAGHFRLVFL--PPVEILEEAMDRFEEFMRERL 396 (398)
T ss_pred -CC---HHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhc
Confidence 01 1245555677789999988765321 1246999996 478999999999999887643
No 177
>PLN02656 tyrosine transaminase
Probab=99.83 E-value=5.8e-18 Score=169.83 Aligned_cols=310 Identities=15% Similarity=0.114 Sum_probs=197.2
Q ss_pred CCeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcC-CCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEEE
Q 013461 107 SGKEVVNFASANYL---GLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSIL 174 (442)
Q Consensus 107 ~G~~~id~~s~~~l---~~~~~p~v~ea~~~~l~~~g-~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i~ 174 (442)
.|+++|||+.++.- .+..++.+++++.+++..-. .+++ ......++++.+|++++ .+++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-------~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~ 101 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYA-------PTVGLPQARRAIAEYLSRDLPYKLSLDDVFI 101 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCC-------CCCCCHHHHHHHHHHHHHhcCCCCCcccEEE
Confidence 57899999877642 25567899999998887521 1221 12223566666666653 246777
Q ss_pred EcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcccc-------c
Q 013461 175 YSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADN-------K 240 (442)
Q Consensus 175 ~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~~-------~ 240 (442)
++++++++..++.+++++||.|++++++|..+.......|.+++.++.. |++++++.++..+... +
T Consensus 102 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NP 181 (409)
T PLN02656 102 TSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNP 181 (409)
T ss_pred eCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCC
Confidence 7778899999999999999999999999988877788889988877641 5677776664432210 0
Q ss_pred c-----------------cccccccccCCCc-c-------ccccCCCCCceeEEEEeccccccCCC---cEEEcC-----
Q 013461 241 R-----------------SNSFGVLGRSGRG-L-------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS----- 287 (442)
Q Consensus 241 ~-----------------a~~~g~~G~~g~g-~-------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~----- 287 (442)
. .|++-++-+.-.+ + .....+...+..|+++||||+++++| ||++++
T Consensus 182 tG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~ 261 (409)
T PLN02656 182 CGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGS 261 (409)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccc
Confidence 0 2222221111000 0 00001112335789999999998777 999983
Q ss_pred ---HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCCCcee-ecCCCCCEEE
Q 013461 288 ---ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSI-ASNPESPIVF 361 (442)
Q Consensus 288 ---~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~~~~i~~ 361 (442)
+++++.+...... . .+.+++.+.++.++++.. +...+.++.++++++.+.+.|++++++.. ..+..+.++|
T Consensus 262 ~~~~~~~~~~~~~~~~--~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w 338 (409)
T PLN02656 262 FRDPKIVERIKKYFDI--L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVM 338 (409)
T ss_pred cccHHHHHHHHHHHhh--h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEE
Confidence 5788877654222 1 123555666666666521 11244677888889999999988644432 2334566778
Q ss_pred EEecCCC-CCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 362 LILEKST-GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 362 ~~~~~~~-~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+.++... ... .+ ..+++.++++++||.+.|+..+.. ++.+||+++. +++++++++++|++++.+.
T Consensus 339 ~~l~~~~~~~~-~~---~~~~~~~~l~~~gV~v~pg~~fg~-----~~~iRi~~~~--~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 339 VKLNLSLLEDI-SD---DIDFCFKLAREESVIILPGTAVGL-----KNWLRITFAA--DPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred EecchhhcCCC-CC---HHHHHHHHHHhCCEEEecchhcCC-----CCeEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 7764210 000 00 124454567778999999876532 3569999995 7899999999999887644
No 178
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.82 E-value=3.1e-18 Score=176.62 Aligned_cols=311 Identities=15% Similarity=0.167 Sum_probs=191.5
Q ss_pred CCeeEEEeecCCC--CCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh------CC--CcEEEEc
Q 013461 107 SGKEVVNFASANY--LGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL------GT--PDSILYS 176 (442)
Q Consensus 107 ~G~~~id~~s~~~--l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~------g~--e~~i~~~ 176 (442)
.|+++|||+.+|. .++..++.+++++.+++... .++ +......+|++.||+++ +. +++++++
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~-~~Y-------~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~ 215 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT-EGY-------SDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGN 215 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC-CCC-------CCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeC
Confidence 5789999987543 46766889999999887642 222 22223467777777776 32 4566666
Q ss_pred chHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhccc-------ccc-
Q 013461 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTAD-------NKR- 241 (442)
Q Consensus 177 sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~-------~~~- 241 (442)
++++++..++.+++++||.|+++.++|..+...+.+.|++++.++. .|++++++.+...++. ++.
T Consensus 216 G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG 295 (517)
T PRK13355 216 GVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTG 295 (517)
T ss_pred cHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCC
Confidence 6679999999999999999999999999999889999999887753 2566777665432221 000
Q ss_pred ----------------cccccccccC--------CCccccccCCCCCceeEEEEeccccccCCC---cEEE--cCHHh--
Q 013461 242 ----------------SNSFGVLGRS--------GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCT--GSARV-- 290 (442)
Q Consensus 242 ----------------a~~~g~~G~~--------g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~--g~~~~-- 290 (442)
.|++-++-+. +..........++...++++||||+++++| ||++ +++++
T Consensus 296 ~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~ 375 (517)
T PRK13355 296 ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK 375 (517)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH
Confidence 2232222111 100000011122334566799999998777 9988 54543
Q ss_pred --HHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHH---HHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 013461 291 --VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL---ITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 365 (442)
Q Consensus 291 --i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~---~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~ 365 (442)
++.+...... .+ +.+.....++.++|+..+...+. ..++.++++++.+.|++++|+++..+..+.++|+.+.
T Consensus 376 ~~~~~l~~~~~~-~~--~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~ 452 (517)
T PRK13355 376 DYIEGLNMLANM-RL--CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFYIFPKID 452 (517)
T ss_pred HHHHHHHHHhcC-cC--CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecC
Confidence 3333322111 11 23444445555666421111111 2345566788999998887888775544445555664
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 366 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
....... + ..+++.++|+++||.+.++..+..+ .+..+||++. .++++|++++++|++++...
T Consensus 453 ~~~~~~~-~---~~~~~~~ll~~~gV~v~pg~~F~~~---~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 453 VKKFNIH-D---DEQFALDLLHDKKVLIVQGTGFNWD---KPDHFRVVYL--PRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred cccCCCC-C---HHHHHHHHHHhCCEEEeCcchhCCC---CcCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 2100000 1 1245666777889999998765321 1356999995 58899999999999988653
No 179
>PRK07550 hypothetical protein; Provisional
Probab=99.82 E-value=5.7e-18 Score=168.76 Aligned_cols=309 Identities=12% Similarity=0.102 Sum_probs=194.1
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC----CcEEEEcchHHHHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT----PDSILYSYGLSTMF 183 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~----e~~i~~~sG~~a~~ 183 (442)
|+..+||++++. .+..++.+.+++.+.+.. + ....+....|..++.+.+++.+.+..|. +++++++++++++.
T Consensus 28 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVP-GYPPPPELLRALAEAAAD-P-AAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhC-c-CCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 456899987763 344567888888887743 1 1111222335555555555555555452 34555555578999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhccc-------ccc--------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTAD-------NKR-------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~-------~~~-------- 241 (442)
.++.+++++||.|+++.++|......++..|.+++.++.+ |.+++++.++..++. ++.
T Consensus 105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~ 184 (386)
T PRK07550 105 AAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPEL 184 (386)
T ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHH
Confidence 9999999999999999999998888888999998887752 566788777643221 000
Q ss_pred ---------cccccccccCCC-------ccc-cccCC-CCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCc
Q 013461 242 ---------SNSFGVLGRSGR-------GLT-EHCGV-PVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSG 300 (442)
Q Consensus 242 ---------a~~~g~~G~~g~-------g~~-~~~~v-~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~ 300 (442)
.|++-++-+.-. +.. ..+.. ..++..+++.||||++|..| ||+++++++++.+......
T Consensus 185 ~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~ 264 (386)
T PRK07550 185 LHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDT 264 (386)
T ss_pred HHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhh
Confidence 122211111100 000 00100 11345688999999998665 9999999998877654332
Q ss_pred eeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHH
Q 013461 301 YVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLE 379 (442)
Q Consensus 301 ~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 379 (442)
.. .+.+.+.+.++..+++.+++ ..+.++.++++.+++.+.|.+.+++.+. +..+.++|+.+... + ....
T Consensus 265 ~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~~-~------~~~~ 334 (386)
T PRK07550 265 VA--ICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAYFAYVRHPFP-D------RPSR 334 (386)
T ss_pred cc--cCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceEEEEecCCCC-C------CCHH
Confidence 22 22344555555555544332 2345678888999999999876566554 34556667766421 1 0134
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
++++.+++++||.+.++..+... ....+||+++. .+++++++++++|+++
T Consensus 335 ~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 335 EVARRLAKEAGILCLPGTMFGPG---QEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHhcCEEEeCchhhCCC---CCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 67777677789999998765311 12459999975 4689999999999875
No 180
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.82 E-value=3.2e-18 Score=168.24 Aligned_cols=296 Identities=11% Similarity=0.085 Sum_probs=187.8
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C--C--C-cEEEEcchHH
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G--T--P-DSILYSYGLS 180 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g--~--e-~~i~~~sG~~ 180 (442)
+++||++++. .++..|++.+++.+..... ..++ ...|. .+|++.+++++ | . + ++++++++++
T Consensus 1 ~~~~~~~g~p-~~~~~~~~~~~~~~~~~~~-~~Y~---~~~G~----~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ 71 (350)
T TIGR03537 1 RLFDFGTGDP-KEPTPPFIRKALIDAVPEV-SQYP---SALGT----KALREAISGWFERRFGVKLDPDAQVLPSAGSKE 71 (350)
T ss_pred CeEeccCCCC-CCCCCHHHHHHHHHHHhcc-CCCC---CCCCC----HHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 3678887763 4656788888888775431 1111 12233 45555555554 6 2 3 4555555668
Q ss_pred HHHhhhhhhccCC---CEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcccc-------cc--
Q 013461 181 TMFSAIPCFCKKG---DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADN-------KR-- 241 (442)
Q Consensus 181 a~~~ai~a~~~~g---d~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~~-------~~-- 241 (442)
++..++.+++++| |.|+++.++|..+...++..|++++.++.+ |++++++.+++.++.. +.
T Consensus 72 ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~ 151 (350)
T TIGR03537 72 AIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGA 151 (350)
T ss_pred HHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCc
Confidence 9988889899887 699999999999999999999999887642 5677777665432210 00
Q ss_pred ---------------cccccccccCCCcc--cc-----ccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHh
Q 013461 242 ---------------SNSFGVLGRSGRGL--TE-----HCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRL 296 (442)
Q Consensus 242 ---------------a~~~g~~G~~g~g~--~~-----~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~ 296 (442)
.|++-++-+.-.+. .. ..... .+..|+++||||++|++| ||+++++++++.++.
T Consensus 152 ~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~ 230 (350)
T TIGR03537 152 TAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRK 230 (350)
T ss_pred ccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcC-cCCEEEEeecccccCCccccceeeecCHHHHHHHHH
Confidence 12221211110000 00 01111 245799999999998776 999999999988876
Q ss_pred hCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHH
Q 013461 297 SSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 297 ~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 376 (442)
....+ +.+.+++..+++.+++...+...+.+++++++.+.+.+.|.+. |+++..+..+.++++.++...
T Consensus 231 ~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~~-------- 299 (350)
T TIGR03537 231 LRANF--GVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSGI-------- 299 (350)
T ss_pred HHHhh--ccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCCC--------
Confidence 53332 3334555555555555421222456788889999999999886 777664434556777774311
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
...++++.++ ++||.+.++..+... .+..+||++. .++++++++++++++
T Consensus 300 ~~~~l~~~L~-~~gv~v~~g~~f~~~---~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 300 DAKDYALRLL-ENGIVVAPGENFGSG---EEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CHHHHHHHHH-HCCEEEcCchhhCCC---CCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 1236777654 569999987655321 1356999986 478999999988875
No 181
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=6e-18 Score=167.97 Aligned_cols=293 Identities=15% Similarity=0.088 Sum_probs=189.2
Q ss_pred CCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHH
Q 013461 107 SGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMF 183 (442)
Q Consensus 107 ~G~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~ 183 (442)
.+.++|||++| |. ++.+|.+++++.+. ... . .|.. ....+|++.||+++|.+ ++++++++++++.
T Consensus 50 ~~~~~i~l~~n~~p--~~~~~~v~~a~~~~-~~~-~-------~Yp~-~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~ 117 (380)
T PLN03026 50 KPEDIVKLDANENP--YGPPPEVLEALGNM-KFP-Y-------VYPD-PESRRLRAALAEDSGLESENILVGCGADELID 117 (380)
T ss_pred CccceEEccCCCCC--CCCCHHHHHHHHhh-Hhh-c-------cCCC-CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHH
Confidence 35689999877 44 34568888877542 110 0 0111 12468999999999854 4455555568898
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHH-hhccc-------ccc---------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLE-RVTAD-------NKR--------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~-~~~~~-------~~~--------- 241 (442)
.++.+++++||.|++..++|..+...++..|++++.++.+ |++++++.++ ..++- ++.
T Consensus 118 ~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l 197 (380)
T PLN03026 118 LLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDL 197 (380)
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHH
Confidence 8888999999999999999988877788889998887652 4667766662 21110 000
Q ss_pred ----ccc-ccccccCCCccc---cc-cCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcH
Q 013461 242 ----SNS-FGVLGRSGRGLT---EH-CGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPP 309 (442)
Q Consensus 242 ----a~~-~g~~G~~g~g~~---~~-~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p 309 (442)
... +-+..+....+. .. ..++..+..|+++||||++|++| ||+++++++++.+......+ +.+.
T Consensus 198 ~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~~----~~~~ 273 (380)
T PLN03026 198 LKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----NVSV 273 (380)
T ss_pred HHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCCC----CCCH
Confidence 111 111111110000 00 00112345799999999999888 99999999999887654433 2344
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhC
Q 013461 310 YLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKED 389 (442)
Q Consensus 310 ~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~ 389 (442)
+...++.++|+..+...+.++.++++++++.+.|++++++.+. ++.++++++.++... + ..++++.++ ++
T Consensus 274 ~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~~~f~~~~~~~~~-----~---~~~~~~~l~-~~ 343 (380)
T PLN03026 274 AAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPY-PSDANFILCRVTSGR-----D---AKKLKEDLA-KM 343 (380)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEC-CCCCeEEEEECCCCC-----C---HHHHHHHHH-HC
Confidence 5555566667432223456778888999999999887444443 557888888774211 1 235777655 67
Q ss_pred CEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 390 GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 390 GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
||.++++..+. .+..+||++. +.+|+++++++|+++
T Consensus 344 gI~v~~~~~~~-----~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 344 GVMVRHYNSKE-----LKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CeEEEECCCCC-----CCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 99998754321 1356999997 788999999998753
No 182
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.82 E-value=1.3e-17 Score=167.56 Aligned_cols=312 Identities=16% Similarity=0.172 Sum_probs=198.2
Q ss_pred CCeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--------------C
Q 013461 107 SGKEVVNFASANYL---GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------------T 169 (442)
Q Consensus 107 ~G~~~id~~s~~~l---~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------------~ 169 (442)
.|+++|||+.++.- .+..++.+.+++.+.++... ... |+......+|++.||++++ .
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~--~~~----Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQE--CNG----YPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCC--CCC----CCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 57789999877642 14567889999988877511 111 2222223567777777654 2
Q ss_pred CcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhccc----
Q 013461 170 PDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTAD---- 238 (442)
Q Consensus 170 e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~---- 238 (442)
+++++++++++++..++.+++++||.|+++.++|..+...++..|++++.++.. |++++++.++...+.
T Consensus 105 ~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~ 184 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMT 184 (412)
T ss_pred hhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEe
Confidence 456777777899999999999999999999999999999899999998877631 466777665432211
Q ss_pred ---ccc-----------------cccccccccCCC-cc-------ccccCCCCCceeEEEEeccccccCCC---cEEEc-
Q 013461 239 ---NKR-----------------SNSFGVLGRSGR-GL-------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTG- 286 (442)
Q Consensus 239 ---~~~-----------------a~~~g~~G~~g~-g~-------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g- 286 (442)
++. .|++-++-+.-. .+ ............|+++||||.+|++| ||+++
T Consensus 185 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~ 264 (412)
T PTZ00433 185 NPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLV 264 (412)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEe
Confidence 000 122222211100 00 00011111223588999999998777 99986
Q ss_pred -----CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHH-H-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCE
Q 013461 287 -----SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV-L-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPI 359 (442)
Q Consensus 287 -----~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~-l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i 359 (442)
.+++++.++.... ..+ +.+++.+.++.+++.. . ....+.+++++++++.+.+.|++..++.+..+..+.+
T Consensus 265 ~p~~~~~~~~~~~~~~~~-~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f 341 (412)
T PTZ00433 265 DPHGNGGDFLDGMKRLGM-LVC--GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMF 341 (412)
T ss_pred CCcccHHHHHHHHHHHhh-ccC--CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEE
Confidence 2457776655322 112 3455666555556542 1 1224567788889999999998755676654555777
Q ss_pred EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 360 VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+|+.++...-. +.....++++.+++++||.+.++..+.. +..+||+++. .++++++++++|.+++...
T Consensus 342 ~~~~l~~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~~iRis~~~--~~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 342 LMSRLDLEKFR---DIKSDVEFYEKLLEEENVQVLPGEIFHM-----PGFTRLTISR--PVEVLREAVERIKAFCERH 409 (412)
T ss_pred EEEEechhhcC---CCCCHHHHHHHHHHhcCEEEeCccccCC-----CCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 88877421000 0001236777777667999998876532 3569999985 5889999999999988654
No 183
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.3e-17 Score=166.80 Aligned_cols=309 Identities=17% Similarity=0.179 Sum_probs=188.8
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-------CCcEEEEcchHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-------TPDSILYSYGLS 180 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-------~e~~i~~~sG~~ 180 (442)
|..++||..+.. .+..++.+.+++.+..... .. |+......++++.+|++++ .++++++++|++
T Consensus 29 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~-~~-------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~ 99 (397)
T PRK07568 29 GIKVYHLNIGQP-DIKTPEVFFEAIKNYDEEV-LA-------YSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSE 99 (397)
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHhcCC-cC-------cCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHH
Confidence 345788876652 3434577888776654321 11 2222233677777777762 356777778889
Q ss_pred HHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhcccc-------cc----
Q 013461 181 TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN--------DMDSLRNTLERVTADN-------KR---- 241 (442)
Q Consensus 181 a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~--------d~~~Le~~l~~~~~~~-------~~---- 241 (442)
++..++.+++++||.|+++.++|..+...++..|.+++.++.+ |++++++.+++.++.. +.
T Consensus 100 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~ 179 (397)
T PRK07568 100 AILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVY 179 (397)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccC
Confidence 9999998899999999999998887777778889888877642 2466666554322110 00
Q ss_pred -------------cccccccccC--------CCccccccCCCC-CceeEEEEeccccccCCC---cEEEcC-HHhHHHHH
Q 013461 242 -------------SNSFGVLGRS--------GRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTGS-ARVVDHQR 295 (442)
Q Consensus 242 -------------a~~~g~~G~~--------g~g~~~~~~v~~-~~~diii~S~sK~lg~~G---G~v~g~-~~~i~~l~ 295 (442)
.+++-++-+. +........... .+..+++.||||.+|+.| ||++++ +++++.+.
T Consensus 180 ~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~ 259 (397)
T PRK07568 180 TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAM 259 (397)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHH
Confidence 1121111110 100000111111 245689999999998655 998874 77887665
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
..... .+ +.+++.+.++.++++..+ ...++++.++++++.+.+.|++++++.+..+..+.++|+.++.. +
T Consensus 260 ~~~~~-~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~------~ 330 (397)
T PRK07568 260 KLCQA-RL--SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVD------D 330 (397)
T ss_pred HHhhc-cC--CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCC------C
Confidence 43222 12 234445555555554322 22446778889999999999887677665444445567776421 1
Q ss_pred HHHHHHHHHHHHHh-----CCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 375 LQLLEDIADWALKE-----DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 375 ~~~~~~i~~~~L~~-----~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
..++++.++++ .||.+.++..+.......+..+||+++ .+++++++++++|++++++..+
T Consensus 331 ---~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~~~ 395 (397)
T PRK07568 331 ---AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKYNK 395 (397)
T ss_pred ---HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHhhc
Confidence 22556655543 599999976542211111246999997 4689999999999999887653
No 184
>PRK07337 aminotransferase; Validated
Probab=99.82 E-value=1e-17 Score=167.14 Aligned_cols=307 Identities=12% Similarity=0.113 Sum_probs=192.3
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----CcEEEEcchH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYGL 179 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e~~i~~~sG~ 179 (442)
|..+++|..++. .+..+|.+.+++.+.++.....+ +......+|++.+|+++ |. ++++++++++
T Consensus 29 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 100 (388)
T PRK07337 29 GRDIIHMGIGEP-DFTAPEPVVEAAARALRRGVTQY-------TSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGAS 100 (388)
T ss_pred CCCEEEeCCcCC-CCCCCHHHHHHHHHHHhcCCCCC-------CCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcH
Confidence 346788876653 34456889999988876421111 11222356666666664 42 4667777778
Q ss_pred HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhccc-------ccc----
Q 013461 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTAD-------NKR---- 241 (442)
Q Consensus 180 ~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~-------~~~---- 241 (442)
+++..++.+++++||.|+++.++|......++..|++++.++.+ |++++++.+...+.. ++.
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~ 180 (388)
T PRK07337 101 AALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSI 180 (388)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCc
Confidence 99999999999999999999999999988888889988877642 456666655432211 000
Q ss_pred -------------ccccccc-ccCCCccc------cccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhC
Q 013461 242 -------------SNSFGVL-GRSGRGLT------EHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 -------------a~~~g~~-G~~g~g~~------~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~ 298 (442)
.|+.-++ .+....+. ..... ++..|+++||||.+|++| ||+++++++++.+....
T Consensus 181 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~ 258 (388)
T PRK07337 181 APDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSL--GDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLA 258 (388)
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhc--cCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHH
Confidence 1222111 11100010 00111 223477899999998766 99999999998876553
Q ss_pred CceeccCCCcHHHHHHHHHHHHH--HhcChHHHHHHHHHHHHHHHhhccCCCceee-cCCCCCEEEEEecCCCCCchhhH
Q 013461 299 SGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIHGLSIA-SNPESPIVFLILEKSTGSMKNDL 375 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~--l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 375 (442)
..+..+ .+++...++.++++. .+...+.++.++++++++.+.|++. |+.+. .+..+.++|+.++.... ++.
T Consensus 259 ~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~---~~~ 332 (388)
T PRK07337 259 QNLFIC--ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAH---PAA 332 (388)
T ss_pred HHhccC--CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccC---CCC
Confidence 332222 244444444455531 1122446778888999999999886 76542 34466788888743100 000
Q ss_pred HHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 376 QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 376 ~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
....+++..+++++||.+.++..+..+. .+..+||+++. +++++++++++|.+++
T Consensus 333 ~~~~~~~~~ll~~~gv~v~pg~~f~~~~--~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 333 GDSAALTQAMLHDAGVVLVPGRDFGPHA--PRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCCCC--CCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 0123677767777899999987654211 13569999985 6899999999998754
No 185
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.82 E-value=1e-17 Score=167.74 Aligned_cols=310 Identities=15% Similarity=0.134 Sum_probs=197.8
Q ss_pred CeeEEEeecCCC---CCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--------CcEEEEc
Q 013461 108 GKEVVNFASANY---LGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--------PDSILYS 176 (442)
Q Consensus 108 G~~~id~~s~~~---l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--------e~~i~~~ 176 (442)
|.+++||+.+++ ..+..++.+.+++.+.++.... . .|+......++++.+|++++. +++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~-~-----~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~ 103 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKF-N-----GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTS 103 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCC-C-----CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEec
Confidence 678999987764 2455678999999988864211 0 122233346788888888863 4577778
Q ss_pred chHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhcccccc--------
Q 013461 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKR-------- 241 (442)
Q Consensus 177 sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~~~~-------- 241 (442)
+|++++..++.+++++||.|+++.++|..+...+...|.+++.++. .|++++++.+...+.....
T Consensus 104 G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG 183 (403)
T TIGR01265 104 GCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCG 183 (403)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCC
Confidence 8889999999999999999999999999888888888888887653 2466776665432211000
Q ss_pred ----------------cccccccccC--------CCccccccCCCCCceeEEEEeccccccCCC---cEEEcC--HH---
Q 013461 242 ----------------SNSFGVLGRS--------GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS--AR--- 289 (442)
Q Consensus 242 ----------------a~~~g~~G~~--------g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~--~~--- 289 (442)
.+++-++-+. +........+.++...|+++||||+++++| ||++++ ++
T Consensus 184 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~ 263 (403)
T TIGR01265 184 SVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFR 263 (403)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhH
Confidence 1121111110 000000011222234688999999998776 999874 22
Q ss_pred --hHHHHHhhCCceeccCCCcHHHHHHHHHHHHH-H-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 013461 290 --VVDHQRLSSSGYVFSASLPPYLASAAITAIDV-L-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 365 (442)
Q Consensus 290 --~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~-l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~ 365 (442)
+++.+..... .. .+.+++...++.++++. . ....+.+++++++++++.+.|+..+|+.+..+..+.++|+.++
T Consensus 264 ~~~~~~~~~~~~-~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~ 340 (403)
T TIGR01265 264 DTVLQGLKNLLQ-RI--LGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLE 340 (403)
T ss_pred HHHHHHHHHHhh-hh--cCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEecc
Confidence 3444433221 11 12355555555566642 1 1124567788888999999998876777655567888888875
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 366 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..... +.....++++.+++++||.+.++..+.. +..+||++.. .++.+++++++|++++++
T Consensus 341 ~~~~~---~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----~~~iRis~~~--~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 341 LELFP---EIKDDVDFCEKLVREESVICLPGSAFGL-----PNWVRITITV--PESMLEEACSRIKEFCER 401 (403)
T ss_pred ccccC---CCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 32100 0001336777667778999999876532 3569999984 588999999999887754
No 186
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.82 E-value=1.3e-17 Score=165.38 Aligned_cols=294 Identities=17% Similarity=0.231 Sum_probs=195.1
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSA 185 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~a 185 (442)
|+.+++++.+ ++|.+.+++.+.++.. .+. +..+.+..+.+.++++.+|+++|.+ ..+++++|++++..+
T Consensus 22 ~~~~~~~~~~------~~~~~~~a~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~ 92 (373)
T TIGR03812 22 GRILGSMCTN------PHPIAVKAYDMFIETN-LGD--PGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQA 92 (373)
T ss_pred CcEEEEEeCC------chHHHHHHHHHHhhcC-CCC--cccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHH
Confidence 4566666553 4678888888776653 122 2234466788899999999999975 458888999998887
Q ss_pred hhhhc------cCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc-------------
Q 013461 186 IPCFC------KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR------------- 241 (442)
Q Consensus 186 i~a~~------~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~------------- 241 (442)
+.++. ++||.|+++++.|.++..+++..|.+++.++++ |++++++.+++.+.....
T Consensus 93 ~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~ 172 (373)
T TIGR03812 93 VRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDI 172 (373)
T ss_pred HHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCH
Confidence 76654 477999999999999999999999999888763 788888887654311100
Q ss_pred ------c--cccccc--ccCCCccccc-------cCCC--CCceeEEEEeccccc-cC--CCcEEEcCHHhHHHHHhhCC
Q 013461 242 ------S--NSFGVL--GRSGRGLTEH-------CGVP--VDKIDIVTAAMGHAL-AT--EGGFCTGSARVVDHQRLSSS 299 (442)
Q Consensus 242 ------a--~~~g~~--G~~g~g~~~~-------~~v~--~~~~diii~S~sK~l-g~--~GG~v~g~~~~i~~l~~~~~ 299 (442)
+ ++.-++ +..+.+...+ .+++ ...+|.++.|.+|.. +. .||++++++++++.++.. .
T Consensus 173 ~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~-~ 251 (373)
T TIGR03812 173 EELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVD-A 251 (373)
T ss_pred HHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhccc-C
Confidence 1 111111 1111111110 1111 124677788889943 22 345677888888876532 2
Q ss_pred ceecc-------CCCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCC
Q 013461 300 GYVFS-------ASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGS 370 (442)
Q Consensus 300 ~~~~s-------~s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~ 370 (442)
+|.+. ++.++..++++.++++.+.+. ++..++..++++++++.|+++ |+....++..+++.+.++.
T Consensus 252 ~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~---- 326 (373)
T TIGR03812 252 PYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDD---- 326 (373)
T ss_pred cccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCC----
Confidence 34332 233455566677888876532 457889999999999999987 6653334566777766531
Q ss_pred chhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 371 MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 371 ~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
..++.+. |.++||.++.... +..+|++++..+|++|+++++++|++
T Consensus 327 -------~~~v~~~-L~~~gi~v~~~~~--------~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 327 -------PEEVRKK-LRDRGWYVSVTRC--------PKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -------HHHHHHH-HHHCCceeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 1256665 5566999876532 24599999999999999999999975
No 187
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=2.7e-17 Score=161.72 Aligned_cols=291 Identities=13% Similarity=0.144 Sum_probs=188.9
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhh
Q 013461 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPC 188 (442)
Q Consensus 111 ~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a 188 (442)
.++|..|.. .++.++.+++++.+.+...... .|.. +...++++.+|++++.+ ++++++++++++..++.+
T Consensus 24 ~~~l~~~~~-~~~~p~~~~~a~~~~~~~~~~~------~y~~-~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 24 KYKMDANET-PFELPEEVIKNIQEIVKSSQVN------IYPD-PTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred eeEccCCCC-CCCCCHHHHHHHHHHhhcCccc------CCCC-ccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHH
Confidence 477776653 5666789999998877532111 1111 12478999999999853 455555556788888899
Q ss_pred hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccc--------cc--------------
Q 013461 189 FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADN--------KR-------------- 241 (442)
Q Consensus 189 ~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~--------~~-------------- 241 (442)
++++||.|+++.++|..+...++..|++++.++.+ |++++++.++....+. +.
T Consensus 96 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~ 175 (351)
T PRK14807 96 FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIE 175 (351)
T ss_pred hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999998888888899998887642 5677777765321110 00
Q ss_pred ccc-ccccccCCCcccc--ccC-CCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHH
Q 013461 242 SNS-FGVLGRSGRGLTE--HCG-VPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASA 314 (442)
Q Consensus 242 a~~-~g~~G~~g~g~~~--~~~-v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaa 314 (442)
.+. +-+..+....+.. ... ....+..|+++||||++|++| ||+++++++++.++.....+ + .+++...+
T Consensus 176 ~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~--~--~~~~~q~~ 251 (351)
T PRK14807 176 KSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPY--N--INSLSQVI 251 (351)
T ss_pred hCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCCC--C--cCHHHHHH
Confidence 111 1111111101100 000 112345799999999999877 99999999999887654332 2 24455555
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEe
Q 013461 315 AITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 315 a~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
+.++++. ....+.++.++++++++.+.|++++|+.+. +++++++++.+.+ ..++++. |.++||.+.
T Consensus 252 ~~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~~-----------~~~~~~~-l~~~gV~v~ 317 (351)
T PRK14807 252 ALKVLRT-GVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFKD-----------ADYVYQG-LLERGILVR 317 (351)
T ss_pred HHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcCC-----------HHHHHHH-HHHCCEEEE
Confidence 5555543 122345567788888898999877787765 4577888877631 2256665 445699998
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
+..... ..++.+||++. +.++.++++++|++++
T Consensus 318 ~~~~~~----~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 318 DFSKVE----GLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred ECCCCC----CCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 643211 12456999997 6788999999998753
No 188
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.81 E-value=1.9e-17 Score=163.14 Aligned_cols=267 Identities=15% Similarity=0.178 Sum_probs=176.5
Q ss_pred CcHHHHHHHHHHHhhhCCC--c-EEEEcchHHHHHhhhhhhccCCCEEEeCCCchHH--HHHHHHhcCCeEEEecC----
Q 013461 152 TIDVHLDCEARIAKFLGTP--D-SILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWG--IQNGLYLSRSTVVYFKH---- 222 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e--~-~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s--~~~~~~l~g~~v~~~~~---- 222 (442)
..+...++++.+++++|.+ + ++++++|++++..++.++.++||.|+++.+.|++ +...++..|++++.++.
T Consensus 30 ~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 109 (356)
T cd06451 30 FLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGE 109 (356)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCC
Confidence 3466889999999999973 3 4667778999999999999999999998877776 34567778888887753
Q ss_pred -CCHHHHHHHHHh-hcccccc---------------------cccccccccC--CCccccccCCCCCceeEEEEeccccc
Q 013461 223 -NDMDSLRNTLER-VTADNKR---------------------SNSFGVLGRS--GRGLTEHCGVPVDKIDIVTAAMGHAL 277 (442)
Q Consensus 223 -~d~~~Le~~l~~-~~~~~~~---------------------a~~~g~~G~~--g~g~~~~~~v~~~~~diii~S~sK~l 277 (442)
.|.+++++.+++ .+..... .++.-++-+. ..|.. .+.+...+.|++++|++|++
T Consensus 110 ~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~-~~~~~~~~~d~~~~s~~K~l 188 (356)
T cd06451 110 AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGE-PFRMDEWGVDVAYTGSQKAL 188 (356)
T ss_pred CCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCc-cccccccCccEEEecCchhc
Confidence 467888888765 2211000 1111111110 11111 12222235789999999999
Q ss_pred cCC-C-cEEEcCHHhHHHHHh--hCCce---------------eccCCCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHH
Q 013461 278 ATE-G-GFCTGSARVVDHQRL--SSSGY---------------VFSASLPPYLASAAITAIDVLEEN--PDLITKLKKNT 336 (442)
Q Consensus 278 g~~-G-G~v~g~~~~i~~l~~--~~~~~---------------~~s~s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~ 336 (442)
+.+ | |+++.+++.++.+.. ...++ ..+++.++...+++.++++.+... +.+.++.+++.
T Consensus 189 ~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~ 268 (356)
T cd06451 189 GAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLA 268 (356)
T ss_pred cCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 753 4 999999998887753 11111 122334455556666788776532 45778888999
Q ss_pred HHHHHhhccCCCceeecCCC--CCEE-EEEecCCCCCchhhHHHHHHHHHHHHHhC-CEEEeeccCcccccCCCCCceEE
Q 013461 337 AILRTGLSDIHGLSIASNPE--SPIV-FLILEKSTGSMKNDLQLLEDIADWALKED-GVFVVTSKRSMLDKCRLPVGIRL 412 (442)
Q Consensus 337 ~~l~~~L~~~~g~~~~~~~~--~~i~-~~~~~~~~~~~~~~~~~~~~i~~~~L~~~-GV~v~~~~~~~~~~~~~~~~iRi 412 (442)
+++.+.|.+. |+++..++. ++++ ++.++... ...++++. |.++ ||.++++..+. .+..+|+
T Consensus 269 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-L~~~~gI~~~~g~~~~-----~~~~iRi 333 (356)
T cd06451 269 KALREGLEAL-GLKLLAKPELRSPTVTAVLVPEGV--------DGDEVVRR-LMKRYNIEIAGGLGPT-----AGKVFRI 333 (356)
T ss_pred HHHHHHHHHc-CCeeccCcccCCCceEEEECCCCC--------CHHHHHHH-HHHhCCEEEecccccc-----cCCEEEE
Confidence 9999999887 887754322 3333 44442210 12367775 4555 99998765432 1346999
Q ss_pred EecCCCCHHHHHHHHHHHHHHH
Q 013461 413 FVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 413 ~~~~~~t~eei~~~i~~l~~~~ 434 (442)
+++..+|++|+++++++|++++
T Consensus 334 s~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 334 GHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ecCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999865
No 189
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.81 E-value=1.7e-17 Score=165.74 Aligned_cols=302 Identities=14% Similarity=0.115 Sum_probs=189.8
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----C--Cc-EEEE
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----T--PD-SILY 175 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~--e~-~i~~ 175 (442)
.|++++||+.++. .+..++.+++++.+.+... ..++ ...|. .+|++.+|+++ | . ++ .+++
T Consensus 26 ~~~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~-~~Y~---~~~G~----~~lr~aia~~~~~~~~~~~~~~~~~~i~it 96 (393)
T TIGR03538 26 ASKPPIALSIGEP-KHPTPAFVLEALRENLHGL-STYP---TTKGL----PELRQAIARWLERRFDLPTGVDPERHVLPV 96 (393)
T ss_pred cCCCeEEecCCCC-CCCCCHHHHHHHHHHhhcc-CCCC---CCCCC----HHHHHHHHHHHHHhhCCcccCCCCceEEEC
Confidence 4678999988763 4556788899888876431 1111 12333 45555555554 3 2 23 4445
Q ss_pred cchHHHHHhhhhhhccCCCE--EEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhccc-------c
Q 013461 176 SYGLSTMFSAIPCFCKKGDL--IVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTAD-------N 239 (442)
Q Consensus 176 ~sG~~a~~~ai~a~~~~gd~--Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~-------~ 239 (442)
+++++++..++.+++++||. |+++.++|..+...++..|.+++.++.+ |++++++.+.+..+. +
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~N 176 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGN 176 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCC
Confidence 55679999999999999985 8999999988888888899998887642 456676655432111 1
Q ss_pred cc-----------------cccccccccCCCc------------cccc---cCCCCCceeEEEEeccccccCCC---cEE
Q 013461 240 KR-----------------SNSFGVLGRSGRG------------LTEH---CGVPVDKIDIVTAAMGHALATEG---GFC 284 (442)
Q Consensus 240 ~~-----------------a~~~g~~G~~g~g------------~~~~---~~v~~~~~diii~S~sK~lg~~G---G~v 284 (442)
+. .|++-++-+.-.. .... .+....+..|+++||||.++++| ||+
T Consensus 177 PtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~ 256 (393)
T TIGR03538 177 PTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFV 256 (393)
T ss_pred CcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEE
Confidence 10 2232222111100 0000 11111235699999999998777 999
Q ss_pred EcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 013461 285 TGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 364 (442)
Q Consensus 285 ~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~ 364 (442)
++++++++.+...... .+.+.+++.+.++.+++..-+.....++.++++.+.+.+.|++. +.+..+..+.++|+.+
T Consensus 257 i~~~~l~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~~~~ 332 (393)
T TIGR03538 257 AGDAEILKAFLRYRTY--HGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LDLELPDAGFYLWPKV 332 (393)
T ss_pred ecCHHHHHHHHHHHHh--hccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeEEEEEEC
Confidence 9999999887654321 22334555555555555322222346777888888888888764 3333355677888887
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc---CCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 365 EKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK---CRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~---~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
+. + ..++++.+++++||.+.++..+.... ...+..+||++.. +++++++++++|+++
T Consensus 333 ~~-------~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 333 PG-------D---DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRSF 392 (393)
T ss_pred CC-------C---HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHHh
Confidence 41 1 13577766677899999987653211 1113569999975 689999999999764
No 190
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=3.8e-18 Score=160.50 Aligned_cols=308 Identities=21% Similarity=0.309 Sum_probs=212.9
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHH----HHHHhhhCCCcE-EEEcchHHH
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCE----ARIAKFLGTPDS-ILYSYGLST 181 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le----~~lA~~~g~e~~-i~~~sG~~a 181 (442)
++.|++ +|-|| .+|.|.+|.-..+.+ |..|+.|-| +||..+..+++| ++..++||.+.+ +--.||+.|
T Consensus 26 ~~~ieLIASEN~----~S~aV~~A~gS~ltnKYAEGyPgkR-yYgGce~VD~vE~laierak~LFga~~anVQPhSGs~A 100 (413)
T COG0112 26 REHIELIASENF----TSPAVMEAQGSDLTNKYAEGYPGKR-YYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQA 100 (413)
T ss_pred hhceeeeecccc----CCHHHHHHHhhhhhhccccCCCCcc-ccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHH
Confidence 356777 88898 468999999888865 988988888 566555554444 344568898876 556799999
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHH-HH--HHhcCC--eEEEecCC------CHHHHHHHHHhhcccccc---------
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQ-NG--LYLSRS--TVVYFKHN------DMDSLRNTLERVTADNKR--------- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~-~~--~~l~g~--~v~~~~~~------d~~~Le~~l~~~~~~~~~--------- 241 (442)
|.+++.++.+|||.|+--+..|+.-. .+ +..+|. +++.|+.+ |+|.++++.++..++...
T Consensus 101 N~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~r~ 180 (413)
T COG0112 101 NQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYSRP 180 (413)
T ss_pred HHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccccc
Confidence 99999999999999988776665532 22 233333 33444433 789999998888776432
Q ss_pred ---------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCH-HhHHHHHhhC
Q 013461 242 ---------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSA-RVVDHQRLSS 298 (442)
Q Consensus 242 ---------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~-~~i~~l~~~~ 298 (442)
+|-.|.+- .|. |.+ +....|++++|-+|+| |..||++.+++ ++.+.+...-
T Consensus 181 id~~~~reIad~VGA~L~~DmAHiaGLVA---~G~--~p~-P~~~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aV 254 (413)
T COG0112 181 IDFKRFREIADEVGAYLMVDMAHVAGLIA---GGV--HPN-PLPHADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAV 254 (413)
T ss_pred cCHHHHHHHHHHhCceEEehHHHHHHHHh---ccc--CCC-CCCccceEeCCcccCCCCCCceEEEeccHHHHHHhhhhc
Confidence 33333321 111 111 2234799999999999 78899999985 8888887665
Q ss_pred CceeccCCCcHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHhhccCCCceeec-CCCCCEEEEEecCCCCCchhhHH
Q 013461 299 SGYVFSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIAS-NPESPIVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~l~~~-~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 376 (442)
.+...+..+.-..++-+.+..+.++-. .+..++..+|.+.|.+.|.+. |+++.+ ..+++.+.+.+.+. +.
T Consensus 255 FPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~-~~------ 326 (413)
T COG0112 255 FPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSK-GL------ 326 (413)
T ss_pred CCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccC-CC------
Confidence 665555544445555555555666543 678889999999999999986 998865 45678888887522 10
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccccC-CCCCceEEEecC----CCCHHHHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLDKC-RLPVGIRLFVSA----AHSEADLVKACESLKRISAV 436 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~~~-~~~~~iRi~~~~----~~t~eei~~~i~~l~~~~~~ 436 (442)
..+-++..|.+.||.+....-|..+.. ..|++|||-.+. ++.++|++++.+.|.+++..
T Consensus 327 -~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 327 -TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred -CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 123456678888998876554433222 236789998765 45689999999988887753
No 191
>PRK06855 aminotransferase; Validated
Probab=99.81 E-value=1.1e-17 Score=168.79 Aligned_cols=316 Identities=13% Similarity=0.087 Sum_probs=188.9
Q ss_pred CeeEEEeecCCC--CCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcc
Q 013461 108 GKEVVNFASANY--LGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSY 177 (442)
Q Consensus 108 G~~~id~~s~~~--l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~s 177 (442)
|+++++++.++. .++..++.+.+++.+.+++-. ..++....|. .+|++.+|+++ | .++++++++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~--~~~Y~~~~G~----~~LReaia~~~~~~~g~~~~~~~I~it~G 104 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDK--SYGYCPTKGV----LETREFLAELNNKRGGAQITPDDIIFFNG 104 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhcCC--CCCCCCCCCC----HHHHHHHHHHHHhccCCCCCHhHEEEcCc
Confidence 567788865553 256677888989888775411 1111122344 45555555554 4 245666677
Q ss_pred hHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH-HhcCCeEEEecC-------CCHHHHHHHHHhhcc---------ccc
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL-YLSRSTVVYFKH-------NDMDSLRNTLERVTA---------DNK 240 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~-~l~g~~v~~~~~-------~d~~~Le~~l~~~~~---------~~~ 240 (442)
+.+++..++. ++++||.|++++++|+.+.... ...|.+++.++. .|+++|++.++...+ .++
T Consensus 105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NP 183 (433)
T PRK06855 105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNP 183 (433)
T ss_pred HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCC
Confidence 7788888874 7899999999999998765432 345777766642 267888888753211 111
Q ss_pred c-----------------cccccccccCCCc-c-------ccccCCCCCceeEEEEeccccccCCC---cEEEcC-----
Q 013461 241 R-----------------SNSFGVLGRSGRG-L-------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS----- 287 (442)
Q Consensus 241 ~-----------------a~~~g~~G~~g~g-~-------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~----- 287 (442)
. .|++-++-+.-.+ + .....+.++...|+++||||+++++| ||++++
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~ 263 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD 263 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence 1 2333222111110 0 01111222334589999999998776 999862
Q ss_pred H---HhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH---hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEE
Q 013461 288 A---RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL---EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVF 361 (442)
Q Consensus 288 ~---~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l---~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~ 361 (442)
+ .+++.+..... . ..+.+.+.+.++.++++.- +..++.++.++++.+.+.+.|++++++.+..+..+.++|
T Consensus 264 ~~~~~~~~~~~~~~~--~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w 340 (433)
T PRK06855 264 EVFKKYINSILNAKM--I-EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMT 340 (433)
T ss_pred hHHHHHHHHHHHhhc--c-ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEe
Confidence 2 23333322211 1 1123445555555565321 112356778889999999999877677665444566778
Q ss_pred EEecCCCC-------Cc--hhhH----------HHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHH
Q 013461 362 LILEKSTG-------SM--KNDL----------QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 422 (442)
Q Consensus 362 ~~~~~~~~-------~~--~~~~----------~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~ee 422 (442)
+.++.... .. +.+. ....+++..++++.||.+.|+..+... ..++||+++. .++++
T Consensus 341 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~----~~~~Rls~~~-~~~~~ 415 (433)
T PRK06855 341 VVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE----LNGFRVTLLE-RDEEK 415 (433)
T ss_pred eccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC----CCceEEEECC-CcHHH
Confidence 77753210 00 0000 012356666677789999998776421 2459999986 57999
Q ss_pred HHHHHHHHHHHHHHHh
Q 013461 423 LVKACESLKRISAVVL 438 (442)
Q Consensus 423 i~~~i~~l~~~~~~~~ 438 (442)
|++++++|++++++..
T Consensus 416 i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 416 FEWIYQTLAEKIEEYL 431 (433)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987654
No 192
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.81 E-value=2.1e-17 Score=161.96 Aligned_cols=292 Identities=15% Similarity=0.137 Sum_probs=184.5
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEEEEcchHHHHH
Q 013461 112 VNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYSYGLSTMF 183 (442)
Q Consensus 112 id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i~~~sG~~a~~ 183 (442)
+|++++++ .+..+|.++++..+ ..++.....+. ......++++.++++++ .++.+++++|++++.
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~ 73 (350)
T cd00609 1 IDLSIGEP-DFPPPPEVLEALAA--AALRAGLLGYY----PDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCCC-CCCCCHHHHHHHHH--HhhccCCCCCC----CCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 35666654 55567777777665 33333333222 23334455555555554 346788888899999
Q ss_pred hhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCH-------HHHHHHHHhhcccccc---------------
Q 013461 184 SAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDM-------DSLRNTLERVTADNKR--------------- 241 (442)
Q Consensus 184 ~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~-------~~Le~~l~~~~~~~~~--------------- 241 (442)
.++.++.++||.|+++.+.|.++...++..+.+++.++.++. +.++.... +..+.
T Consensus 74 ~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~~ 150 (350)
T cd00609 74 LLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVLS 150 (350)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCcccC
Confidence 999999999999999999999999999999998888776421 22322221 11110
Q ss_pred ----------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCC---cEEEcCH-HhHHHHH
Q 013461 242 ----------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSA-RVVDHQR 295 (442)
Q Consensus 242 ----------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~-~~i~~l~ 295 (442)
+|+.+..+..+.+ ........+.|++++|++|+++..| |++++++ ++++.++
T Consensus 151 ~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~ 228 (350)
T cd00609 151 EEELEELAELAKKHGILIISDEAYAELVYDGEPPP--ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLK 228 (350)
T ss_pred HHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc--cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHH
Confidence 2221111111110 0112223457899999999997444 8999998 7888887
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKND 374 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (442)
...... +...++..+.++..+++.. +..+..+++++++.+++.+.|.+.+...+..+..+.++++.+...
T Consensus 229 ~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~------- 299 (350)
T cd00609 229 KLLPYT--TSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG------- 299 (350)
T ss_pred HHHHhc--ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC-------
Confidence 654332 2234555566666677655 334567888999999999999887433322233455666665321
Q ss_pred HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 375 LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 375 ~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
...+...++|++.||.+.+...+.. ..+..+|++++.. ++|+++++++|+
T Consensus 300 --~~~~~~~~~l~~~gi~i~~~~~~~~---~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 300 --DDEEFLERLLLEAGVVVRPGSAFGE---GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred --ChHHHHHHHHHhCCEEEeccccccc---CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 0123444567778999987754421 1135699999986 999999999886
No 193
>PRK02948 cysteine desulfurase; Provisional
Probab=99.81 E-value=5.3e-18 Score=168.74 Aligned_cols=301 Identities=14% Similarity=0.069 Sum_probs=184.8
Q ss_pred CChHHHHHHHHHHHhcC-CCCCccCccccCcHHHHHHHHHHHhhhCC-CcEE-EEcchHHHHHhhhhhhc----cCCCEE
Q 013461 124 GHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFLGT-PDSI-LYSYGLSTMFSAIPCFC----KKGDLI 196 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~g-~~~~~~~~~~g~~~~~~~le~~lA~~~g~-e~~i-~~~sG~~a~~~ai~a~~----~~gd~V 196 (442)
.++.+++++.+.++.+. ..+..+.......+..+++++.+|+++|. ++.| +++++++++..++.++. ++||.|
T Consensus 12 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~v 91 (381)
T PRK02948 12 MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHI 91 (381)
T ss_pred CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEE
Confidence 36789999999887653 32222211122346788999999999984 3444 55556899888887765 679999
Q ss_pred EeCCCchHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhcccccc---------------------cccccc
Q 013461 197 VADEGVHWGIQNG---LYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR---------------------SNSFGV 247 (442)
Q Consensus 197 i~~~~~h~s~~~~---~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~---------------------a~~~g~ 247 (442)
+++...|+++... ++..|+++..++. .|++++++.+++.+.-... .++.-+
T Consensus 92 v~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~v 171 (381)
T PRK02948 92 ITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLF 171 (381)
T ss_pred EECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEE
Confidence 9999999886554 4556778777653 3678888776542211100 111111
Q ss_pred cccC--CCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHh-HHHHHhh---CCceeccCCCcHHHHHHHHHHHH
Q 013461 248 LGRS--GRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARV-VDHQRLS---SSGYVFSASLPPYLASAAITAID 320 (442)
Q Consensus 248 ~G~~--g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~-i~~l~~~---~~~~~~s~s~~p~~aaaa~aal~ 320 (442)
+-+. ..|. ...++...++|+++.|++|.+|..| |+++.++++ +..+... ...+.. ++.++...+++.++++
T Consensus 172 ivD~~~~~g~-~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~-~t~~~~~~~a~~~al~ 249 (381)
T PRK02948 172 HSDCVQTFGK-LPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWKPVFPGTTHEKGFRP-GTVNVPGIAAFLTAAE 249 (381)
T ss_pred EEEChhhccc-cccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCCCCCCcccCCCCCCCcCC-CCccHHHHHHHHHHHH
Confidence 1110 1111 0112233457999999999998766 888777664 1111100 111222 2345555666667777
Q ss_pred HH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCC-C----CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEe
Q 013461 321 VL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNP-E----SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 321 ~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~-~----~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
.+ +..++.+++++++++++++.|+++ |+++.... . ..++.+.+... + ..++... |+++||.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~------~---~~~~~~~-l~~~gI~v~ 318 (381)
T PRK02948 250 NILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGI------E---GQYTMLE-CNRRGIAIS 318 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCC------C---HHHHHHh-cccCCEEEE
Confidence 65 344567889999999999999987 65543211 1 12444444210 1 2245554 566799999
Q ss_pred eccCccccc-----------CC---CCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 395 TSKRSMLDK-----------CR---LPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 395 ~~~~~~~~~-----------~~---~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+..+.... .. ....+|++++..+|++|+++++++|+++++++
T Consensus 319 ~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 319 TGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred chHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 765321100 00 02459999999999999999999999987654
No 194
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.81 E-value=1.5e-17 Score=164.37 Aligned_cols=295 Identities=16% Similarity=0.150 Sum_probs=178.4
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-----CcEEEEcchHHH
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILYSYGLST 181 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~-----e~~i~~~sG~~a 181 (442)
++..++||++++.. ...+|.+++++.+..... .+ ....|..++++.+++.+.+..|. ++++++++++++
T Consensus 25 ~~~~~i~l~~~~p~-~~~~~~~~~~~~~~~~~~--~Y---~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~ 98 (364)
T PRK07865 25 HPDGIVDLSVGTPV-DPVPPVIQEALAAAADAP--GY---PTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL 98 (364)
T ss_pred cCCCEEEcCCCCCC-CCCCHHHHHHHHHHHhhC--CC---CCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence 34568999887642 333577888887655431 12 22234445555555555544342 344555555688
Q ss_pred HHhhhhhh-ccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC------------------C------CHHHHHHHHHhhc
Q 013461 182 MFSAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH------------------N------DMDSLRNTLERVT 236 (442)
Q Consensus 182 ~~~ai~a~-~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~------------------~------d~~~Le~~l~~~~ 236 (442)
+..+..++ +++||.|+++.++|..+...++..|++++.++. | +.+.++++++...
T Consensus 99 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~ 178 (364)
T PRK07865 99 VAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADSLTELGPQRPALIWLNSPSNPTGRVLGVDHLRKVVAWAR 178 (364)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCChhhCCcccceEEEEcCCCCCCCccCCHHHHHHHHHHHH
Confidence 87777777 799999999999999998888888888766531 1 1223333332211
Q ss_pred cccccccccccccc--------CCCccccc-cCCC--CCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCcee
Q 013461 237 ADNKRSNSFGVLGR--------SGRGLTEH-CGVP--VDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYV 302 (442)
Q Consensus 237 ~~~~~a~~~g~~G~--------~g~g~~~~-~~v~--~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~ 302 (442)
.|++-++-+ .+...... ..+. ..+..|+++||||++|++| ||+++++++++.++.......
T Consensus 179 -----~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~~ 253 (364)
T PRK07865 179 -----ERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHAG 253 (364)
T ss_pred -----HcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHhcC
Confidence 122111111 11111000 0000 1245799999999997766 999999999998875432222
Q ss_pred ccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHH
Q 013461 303 FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIA 382 (442)
Q Consensus 303 ~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~ 382 (442)
+ +.+++.+.++.++++..+...+.++.++++++.+.+.|++. |+.+..+..+.++|+.+.. + ..+++
T Consensus 254 ~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-------~---~~~~~ 320 (364)
T PRK07865 254 M--MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATRGE-------D---CWDTV 320 (364)
T ss_pred C--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeCCC-------C---HHHHH
Confidence 2 23555555555566432223456778888999999999886 7776544344455555421 1 12455
Q ss_pred HHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 383 DWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 383 ~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
+. |.++||.+.++..+... .+..+||+++. +++++++++++|+
T Consensus 321 ~~-l~~~gv~v~pg~~f~~~---~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 321 AW-LAERGILVAPGDFYGPA---GAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred HH-HHHCCEEEeCccccCcC---CCCEEEEEecC--CHHHHHHHHHHhh
Confidence 54 55679999987654211 13569999985 6899999998875
No 195
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.81 E-value=1.5e-17 Score=165.00 Aligned_cols=295 Identities=18% Similarity=0.171 Sum_probs=189.9
Q ss_pred ChHHHHHHHHHHHhcCCCC-Cc-cCccccCcHHHHHHHHHHHhhhCCC---cEEEEcchHHHHHhhhhhhcc---CCCEE
Q 013461 125 HEKLLESCTSALEKYGVGS-CG-PRGFYGTIDVHLDCEARIAKFLGTP---DSILYSYGLSTMFSAIPCFCK---KGDLI 196 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~-~~-~~~~~g~~~~~~~le~~lA~~~g~e---~~i~~~sG~~a~~~ai~a~~~---~gd~V 196 (442)
++.+.+++.+.+..+.... .+ .+......+...++++.+++++|.+ ++++++++++++..++.++.. +||.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~v 91 (373)
T cd06453 12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEI 91 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEE
Confidence 5789999988887653221 11 1112234577788999999999966 567777788999999988877 89999
Q ss_pred EeCCCchHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc---------------------ccccc
Q 013461 197 VADEGVHWGIQN----GLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR---------------------SNSFG 246 (442)
Q Consensus 197 i~~~~~h~s~~~----~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~---------------------a~~~g 246 (442)
++..+.|++... ..+..|++++.++.+ |++++++.+.+.+..... .|+.-
T Consensus 92 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 171 (373)
T cd06453 92 VTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVP 171 (373)
T ss_pred EECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCE
Confidence 999999988532 334668888888754 677888777542211100 22221
Q ss_pred cccc--CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCc------------------eeccC
Q 013461 247 VLGR--SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSG------------------YVFSA 305 (442)
Q Consensus 247 ~~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~------------------~~~s~ 305 (442)
++-+ .+.|... +++...++|+++.|++|.+++.| |++++++++++.++....+ ..|..
T Consensus 172 li~D~a~~~~~~~-~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 250 (373)
T cd06453 172 VLVDGAQSAGHMP-VDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEA 250 (373)
T ss_pred EEEEhhhhcCcee-eeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCC
Confidence 1111 1111111 12222357899999999998654 8999999888776532111 01222
Q ss_pred -CCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEEEEEecCCCCCchhhHHHHHH
Q 013461 306 -SLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIVFLILEKSTGSMKNDLQLLED 380 (442)
Q Consensus 306 -s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~ 380 (442)
+++...+.+..++++.+++. +.+.++.+++.+++.+.|++++++++..+ ...+++.+.++.. + ..+
T Consensus 251 ~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~ 321 (373)
T cd06453 251 GTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI------H---PHD 321 (373)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc------C---HHH
Confidence 23333344445677776642 45778888899999999988877887642 2466777776321 1 235
Q ss_pred HHHHHHHhCCEEEeeccCcccc---cCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 381 IADWALKEDGVFVVTSKRSMLD---KCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 381 i~~~~L~~~GV~v~~~~~~~~~---~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
+.+. |+++||.+.++..+..+ ....+..||++++..+|++|+|+++++|
T Consensus 322 i~~~-l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 322 VATI-LDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHH-HHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 6665 55579999876543211 1112356999999999999999999864
No 196
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.81 E-value=2.2e-17 Score=163.63 Aligned_cols=287 Identities=16% Similarity=0.169 Sum_probs=192.6
Q ss_pred CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhcc----CCCEEE
Q 013461 124 GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFCK----KGDLIV 197 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~~----~gd~Vi 197 (442)
.+|++++++.++++... ..+..+.+..+.+.++++.+|+++|.+ ..+++++|++++..++.++.+ ++|.|+
T Consensus 32 ~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl 108 (371)
T PRK13520 32 PHPIARKAHEMFLETNL---GDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIV 108 (371)
T ss_pred chHHHHHHHHHHHhcCC---CCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEE
Confidence 47899999999987631 122234566778899999999999965 468888999999998877654 579999
Q ss_pred eCCCchHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhcccccc-------------------ccccc--cc--c
Q 013461 198 ADEGVHWGIQNGLYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR-------------------SNSFG--VL--G 249 (442)
Q Consensus 198 ~~~~~h~s~~~~~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~-------------------a~~~g--~~--G 249 (442)
+++..|.++..+++..|.+++.++. .|+++|++.+++.+..... ++..| ++ +
T Consensus 109 ~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~ 188 (371)
T PRK13520 109 VPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA 188 (371)
T ss_pred ecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe
Confidence 9999999999888888988888764 3788888888653321110 11111 11 1
Q ss_pred cCCCcccc------ccCCCCCceeEEEEeccccccC--C-CcEEEcCHHhHHHHHhhCCceecc-------CCCcHHHHH
Q 013461 250 RSGRGLTE------HCGVPVDKIDIVTAAMGHALAT--E-GGFCTGSARVVDHQRLSSSGYVFS-------ASLPPYLAS 313 (442)
Q Consensus 250 ~~g~g~~~------~~~v~~~~~diii~S~sK~lg~--~-GG~v~g~~~~i~~l~~~~~~~~~s-------~s~~p~~aa 313 (442)
..+.+... .+++....+|.++.|.+|..++ + |++++.++++++.+... .+|.++ ++.++..++
T Consensus 189 a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~ 267 (371)
T PRK13520 189 AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVD-TPYLTSKKQATLTGTRSGAGVA 267 (371)
T ss_pred cchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhccc-CccccCCCCcceEeeccChHHH
Confidence 11111100 0222224578888888996532 2 34566777787776422 233221 122344566
Q ss_pred HHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCE
Q 013461 314 AAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGV 391 (442)
Q Consensus 314 aa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV 391 (442)
++.++++.+.+. ++++++..++++++.+.|+++ |+++...+..+++.+.++. ..++.+. |.++||
T Consensus 268 ~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-----------~~~v~~~-L~~~gi 334 (371)
T PRK13520 268 ATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN-----------PDEVREK-LRERGW 334 (371)
T ss_pred HHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC-----------HHHHHHH-HHHCCc
Confidence 667788766432 457888999999999999987 8874334567777766531 2356665 555699
Q ss_pred EEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 392 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 392 ~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.+..... +..+|++++..+|++|+++++++|+++++
T Consensus 335 ~v~~~~~--------~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 335 RVSVTRC--------PEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred eeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 9876432 24599999999999999999999998754
No 197
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.81 E-value=2.2e-17 Score=165.57 Aligned_cols=315 Identities=12% Similarity=0.058 Sum_probs=194.6
Q ss_pred ECCeeEEEeecCCCC---CCCCChHHHHHHHHHHHhcC-CCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEE
Q 013461 106 ISGKEVVNFASANYL---GLIGHEKLLESCTSALEKYG-VGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSI 173 (442)
Q Consensus 106 ~~G~~~id~~s~~~l---~~~~~p~v~ea~~~~l~~~g-~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i 173 (442)
.+|+.+|+|+.+++- .+..+|.+.+++.+++++-. ..++. ..|. .+|++.+|+++ | .++++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~----~~lr~aia~~~~~~~g~~~~~~~I~ 101 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP---TGGI----LPARRAIADYLSNDLPYQLSPDDVY 101 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCC----HHHHHHHHHHHHhhcCCCCCHhhEE
Confidence 367899999887753 26677889999999887521 11211 1233 45666666665 3 24566
Q ss_pred EEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhccc-------c
Q 013461 174 LYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----DMDSLRNTLERVTAD-------N 239 (442)
Q Consensus 174 ~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~---~----d~~~Le~~l~~~~~~-------~ 239 (442)
+++++++++..++.+++++||.|++..++|..+...+...|.+++.++. + |+++|++.++..+.. +
T Consensus 102 it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~N 181 (409)
T PLN00143 102 LTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGN 181 (409)
T ss_pred EecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCC
Confidence 6777779999999999999999999999999988888899999887753 1 567777766432211 1
Q ss_pred cc-----------------cccccccccC--------CCccccccCCCCCceeEEEEeccccccCCC---cEEEcC--HH
Q 013461 240 KR-----------------SNSFGVLGRS--------GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS--AR 289 (442)
Q Consensus 240 ~~-----------------a~~~g~~G~~--------g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~--~~ 289 (442)
+. .|++-++-+. +.-......+...+..|+++||||.++++| ||++++ +.
T Consensus 182 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~ 261 (409)
T PLN00143 182 PCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSG 261 (409)
T ss_pred CCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchh
Confidence 11 2232222111 110000001122235689999999998777 999883 33
Q ss_pred h------HHHHHhhCCceeccCCCcHHHHHHHHHHHHH--HhcChHHHHHHHHHHHHHHHhhccCCCceeec-CCCCCEE
Q 013461 290 V------VDHQRLSSSGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIHGLSIAS-NPESPIV 360 (442)
Q Consensus 290 ~------i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~--l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~~~i~ 360 (442)
+ ++.+........+ .+.+..+++.++++. ....++.+++++++.+++.+.|.++++..+.. +..+.++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~ 338 (409)
T PLN00143 262 LLQICEIADSIKKALNPAPF---PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFA 338 (409)
T ss_pred hhhhHHHHHHHHHHHhccCC---CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEE
Confidence 3 3333322111111 133444455555542 11224467778888888888888764433222 3356788
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 361 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
|+.++...... . ....+++..+++++||.+.++..+.. ++.+||+++. +++++++++++|++++.+..++
T Consensus 339 w~~l~~~~~~~-~--~~~~~~~~~ll~~~gV~v~pg~~f~~-----~~~iRi~~~~--~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 339 LVKLNLLLLED-I--EDDMEFCLKLAKEESLIILPGVTVGL-----KNWLRITFAV--EQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred EEecchhhcCC-C--CCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEEcC--CHHHHHHHHHHHHHHHHHhccC
Confidence 88774210000 0 01234555566778999999876531 4569999984 6899999999999998776553
No 198
>PRK09105 putative aminotransferase; Provisional
Probab=99.81 E-value=3e-17 Score=162.30 Aligned_cols=288 Identities=14% Similarity=0.097 Sum_probs=187.2
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhhh
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSAI 186 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~ai 186 (442)
+++++|..|. ..++.+|.+++++.+.+...+ .|+... ..+|++.||+++|. +++++++++++++..++
T Consensus 43 ~~~i~l~~~~-~~~~~~~~~~~a~~~~~~~~~--------~Y~~~~-~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~ 112 (370)
T PRK09105 43 EGAVFLNANE-CPLGPSPAARDAAARSAALSG--------RYDLEL-EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAV 112 (370)
T ss_pred CCcEEecCCC-CCCCCCHHHHHHHHHHHHHhc--------CCCCch-HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHH
Confidence 4678887664 245567999999988876421 122222 67899999999984 45666667779999999
Q ss_pred hhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcc-------cccc-------------
Q 013461 187 PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTA-------DNKR------------- 241 (442)
Q Consensus 187 ~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~-------~~~~------------- 241 (442)
.+++++||.|++++++|+.+...++..|.+++.++.. |.+.+++.. ..++ .++.
T Consensus 113 ~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~l~nP~NPTG~~~~~~~l~~l~ 191 (370)
T PRK09105 113 LAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD-PNAGLIYICNPNNPTGTVTPRADIEWLL 191 (370)
T ss_pred HHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC-CCCCEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 9999999999999999999999999999998887642 344444321 1110 0000
Q ss_pred ---ccccccc-ccCCCccc---cccCC-CCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHH
Q 013461 242 ---SNSFGVL-GRSGRGLT---EHCGV-PVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPY 310 (442)
Q Consensus 242 ---a~~~g~~-G~~g~g~~---~~~~v-~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~ 310 (442)
.++.-++ .+....+. ....+ +..+..+++.||||++|+.| ||+++++++++.+... .. .+.+..
T Consensus 192 ~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~----~~~~~~ 266 (370)
T PRK09105 192 ANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GH----NPLPVP 266 (370)
T ss_pred HhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-CC----CCcCHH
Confidence 1111111 11000000 00011 11234688899999999888 9999999999988754 11 123445
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 013461 311 LASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDG 390 (442)
Q Consensus 311 ~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~G 390 (442)
.+.++.++++..+..++.+++++++++++.+.|++. |+++.. +.+.++++.++. + ..++++.+++ +|
T Consensus 267 ~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~~~f~~~~~~~-------~---~~~l~~~L~~-~g 333 (370)
T PRK09105 267 AAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCTP-SQANCFMVDVKR-------P---AKAVADAMAK-QG 333 (370)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCC-CCCcEEEEeCCC-------C---HHHHHHHHHH-CC
Confidence 555566666532223456678888999999999886 777654 466666655421 1 2367776554 59
Q ss_pred EEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 391 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 391 V~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
|.+... +.. .+..+|+++. +++++++++++|++++
T Consensus 334 I~v~~~-~~~-----~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 334 VFIGRS-WPI-----WPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred cEEecC-CCC-----CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 998422 111 1356999987 7899999999998764
No 199
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=3e-17 Score=162.69 Aligned_cols=292 Identities=16% Similarity=0.109 Sum_probs=187.4
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSA 185 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~a 185 (442)
+.++|||+.+.. .+++.|.+.+++.+..... .. |+.... .+|++.+|+++|.+ +.++++++++++..+
T Consensus 35 ~~~~i~l~~~~~-~~~~~~~~~~al~~~~~~~-~~-------Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 104 (371)
T PRK05166 35 VPRIAKLGSNEN-PLGPSPAVRRAFADIAELL-RL-------YPDPQG-RALREAIAARTGVPADRIILGNGSEDLIAVI 104 (371)
T ss_pred CcceEEcCCCCC-CCCCCHHHHHHHHHHHHHh-hc-------CCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHH
Confidence 457899987732 2445788888887654331 11 111122 37999999999853 455555556888888
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccc-------cc------------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADN-------KR------------ 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~-------~~------------ 241 (442)
+.+++++||.|++..++|......++..|.+++.++.+ |++++++.++..++-. +.
T Consensus 105 ~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l 184 (371)
T PRK05166 105 CRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARV 184 (371)
T ss_pred HHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 89999999999999999998888888899998887653 5777777765432210 00
Q ss_pred ---c-cccccc-ccCCCccc------cccC-CC-CCceeEEEEeccccccCCC---cEEE-cCHHhHHHHHhhCCceecc
Q 013461 242 ---S-NSFGVL-GRSGRGLT------EHCG-VP-VDKIDIVTAAMGHALATEG---GFCT-GSARVVDHQRLSSSGYVFS 304 (442)
Q Consensus 242 ---a-~~~g~~-G~~g~g~~------~~~~-v~-~~~~diii~S~sK~lg~~G---G~v~-g~~~~i~~l~~~~~~~~~s 304 (442)
+ .+.-++ .+....+. .... +. ..+..|+++||||++|++| ||++ +++++++.++..... ++
T Consensus 185 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~--~~ 262 (371)
T PRK05166 185 LDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTP--FN 262 (371)
T ss_pred HHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccC--CC
Confidence 1 111111 11000000 0000 11 1234689999999999777 9966 578888887654322 22
Q ss_pred CCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHH
Q 013461 305 ASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADW 384 (442)
Q Consensus 305 ~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 384 (442)
.+.+...++.+++..-+..++.++.++++++++.+.|++. |+.+. ++++.++|+.+.. + ..++++.
T Consensus 263 --~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~-------~---~~~l~~~ 328 (371)
T PRK05166 263 --VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR-------P---ASAVAEA 328 (371)
T ss_pred --CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC-------C---HHHHHHH
Confidence 3555555555666432223445677888889999999887 77654 4567777776521 1 2357776
Q ss_pred HHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 385 ALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 385 ~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
+++ +||.+.++..+. .++.+||+++ +.++.+++.++|++++
T Consensus 329 l~~-~gi~v~p~~~~~-----~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 329 LLR-QGVIVKPWKQPG-----FETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred HHH-CCeEEecCCCCC-----CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 554 599999875422 2456999997 6788889988888754
No 200
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.80 E-value=2.2e-17 Score=166.61 Aligned_cols=313 Identities=15% Similarity=0.138 Sum_probs=196.1
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCC-CccCcc-ccCcHHHHHHHHHHHhhhCCC---cEEEEcchHHHHHh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGS-CGPRGF-YGTIDVHLDCEARIAKFLGTP---DSILYSYGLSTMFS 184 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~-~~~~~~-~g~~~~~~~le~~lA~~~g~e---~~i~~~sG~~a~~~ 184 (442)
-|+|-++.. . .++.+++++.+.++++.... .++... .-..+...++++.+|+++|.+ ++++++++++++..
T Consensus 34 iyLd~a~~~---~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~ 109 (424)
T PLN02855 34 VYLDNAATS---Q-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL 109 (424)
T ss_pred EEeeCcccc---C-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence 455554432 2 35789999999887753221 111111 112355689999999999962 45666667788887
Q ss_pred hhhh----hccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc----------
Q 013461 185 AIPC----FCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR---------- 241 (442)
Q Consensus 185 ai~a----~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~---------- 241 (442)
++.+ ..++||.|++..+.|++... ..+..|.+++.++.+ |++++++.+.+.++-...
T Consensus 110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~ 189 (424)
T PLN02855 110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSI 189 (424)
T ss_pred HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCcccccccc
Confidence 7765 35899999999998887543 234568888877642 677777777543221100
Q ss_pred ---------ccccc--ccc--cCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCC--------
Q 013461 242 ---------SNSFG--VLG--RSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSS-------- 299 (442)
Q Consensus 242 ---------a~~~g--~~G--~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~-------- 299 (442)
++..| ++- ....|.. ..++...++|++++|++|.+|..| ||+++++++++.+.....
T Consensus 190 ~~~~~I~~l~~~~g~~vivD~a~~~g~~-~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~ 268 (424)
T PLN02855 190 LPVEDIVHWAHAVGAKVLVDACQSVPHM-PVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLESMPPFLGGGEMISDV 268 (424)
T ss_pred CCHHHHHHHHHHcCCEEEEEhhhhcCCc-CCCchhcCCCEEEeecccccCCCccEEEEEchhhhhcCCCEecCCCceeee
Confidence 22222 111 1111211 123333357999999999778666 899999988776542210
Q ss_pred ----------ceeccC-CCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCC------CCCEE
Q 013461 300 ----------GYVFSA-SLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNP------ESPIV 360 (442)
Q Consensus 300 ----------~~~~s~-s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~------~~~i~ 360 (442)
...|.. +.+....++..++++.+.+ .+.+.++.+++.+++++.|++++|+++.++. .++++
T Consensus 269 ~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v 348 (424)
T PLN02855 269 FLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALC 348 (424)
T ss_pred ecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEE
Confidence 001222 2333444455577877654 2457788889999999999888888887532 24677
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhC-CEEEeeccCcccc--c-CCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 361 FLILEKSTGSMKNDLQLLEDIADWALKED-GVFVVTSKRSMLD--K-CRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~i~~~~L~~~-GV~v~~~~~~~~~--~-~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.+.+... + ..++.+. |.++ ||.++.+..+... + -..+..+|+|++..+|++|+++++++|+++++.
T Consensus 349 ~~~~~~~------~---~~~v~~~-L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 349 AFNVEGI------H---PTDLSTF-LDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred EEEECCc------C---HHHHHHH-hcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 7776321 1 2356664 5555 9999876532210 0 011345999999999999999999999998866
Q ss_pred H
Q 013461 437 V 437 (442)
Q Consensus 437 ~ 437 (442)
.
T Consensus 419 ~ 419 (424)
T PLN02855 419 F 419 (424)
T ss_pred H
Confidence 3
No 201
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.80 E-value=3.9e-17 Score=164.85 Aligned_cols=319 Identities=16% Similarity=0.134 Sum_probs=204.1
Q ss_pred CCeeEEEeecCCC-CCCCCCh---HHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHH
Q 013461 107 SGKEVVNFASANY-LGLIGHE---KLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTM 182 (442)
Q Consensus 107 ~G~~~id~~s~~~-l~~~~~p---~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~ 182 (442)
.|.++++|.+++. ..+.+++ .+.+++.+++..-...+ +......+|++++++++|.+.++++++|++|+
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y-------~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~ 106 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAY-------AGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAE 106 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCccc-------CCCCCHHHHHHHHHHHhCCCcEEECCCHHHHH
Confidence 5778999977654 3666544 58888888886422223 33344579999999999999999999999999
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhccc-ccc-----
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---------------NDMDSLRNTLERVTAD-NKR----- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~---------------~d~~~Le~~l~~~~~~-~~~----- 241 (442)
..++.++++||| |++.++.+.++...+.+.|++++.++. .|+++|++.+.+.... .+.
T Consensus 107 ~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~ 185 (460)
T PRK13238 107 QILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTI 185 (460)
T ss_pred HHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEec
Confidence 999999999999 888888777777778899998886653 3678888888753211 111
Q ss_pred -----------------------cccccccccCCC---cc---c----cccCCCC--------CceeEEEEeccccc-cC
Q 013461 242 -----------------------SNSFGVLGRSGR---GL---T----EHCGVPV--------DKIDIVTAAMGHAL-AT 279 (442)
Q Consensus 242 -----------------------a~~~g~~G~~g~---g~---~----~~~~v~~--------~~~diii~S~sK~l-g~ 279 (442)
.|++-++-+..+ +. . .+.+... .-.|+++.|..|.. +.
T Consensus 186 p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~ 265 (460)
T PRK13238 186 TNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN 265 (460)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCc
Confidence 222222211100 00 0 0111111 12467777777765 34
Q ss_pred CCcEEEcC-HHhHHHHHhhC---CceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCC
Q 013461 280 EGGFCTGS-ARVVDHQRLSS---SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNP 355 (442)
Q Consensus 280 ~GG~v~g~-~~~i~~l~~~~---~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~ 355 (442)
.||+++++ +++++.++... .++...+++++..++|+..+++...+ ++..+...+++++|.+.|++. |+++..+.
T Consensus 266 ~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~-~~~~~~~~~~~~~l~~~L~~~-G~~~~~p~ 343 (460)
T PRK13238 266 IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD-EDYLAYRIGQVEYLGEGLEEA-GVPIQTPA 343 (460)
T ss_pred ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC-hHHHHHHHHHHHHHHHHHHHC-CCCeEccC
Confidence 48899888 57888776553 23322333344433333334432222 234444555789999999886 99998777
Q ss_pred CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC--------CCCceEEEecC-CCCHHHHHHH
Q 013461 356 ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR--------LPVGIRLFVSA-AHSEADLVKA 426 (442)
Q Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~--------~~~~iRi~~~~-~~t~eei~~~ 426 (442)
++.++++.+..-....+.+.....+++..++++.||.+.+...+..++.. ....+|++++. .-|+++++.+
T Consensus 344 Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~ 423 (460)
T PRK13238 344 GGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYV 423 (460)
T ss_pred CceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHH
Confidence 77777777643111000011113568888899999999887654433211 13459999995 4589999999
Q ss_pred HHHHHHHHH
Q 013461 427 CESLKRISA 435 (442)
Q Consensus 427 i~~l~~~~~ 435 (442)
+++|+++.+
T Consensus 424 ~~~l~~~~~ 432 (460)
T PRK13238 424 AEALKAVKE 432 (460)
T ss_pred HHHHHHHHH
Confidence 999988753
No 202
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.80 E-value=6e-17 Score=159.62 Aligned_cols=298 Identities=15% Similarity=0.104 Sum_probs=179.3
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-----CcEEEEcchHHH
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-----PDSILYSYGLST 181 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~-----e~~i~~~sG~~a 181 (442)
++++++||++++. ....+|.+++++.+...... +....|..+++.++++.+.+.+|. ++++++++++++
T Consensus 19 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~-----Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~ 92 (357)
T TIGR03539 19 HPDGIVDLSVGTP-VDPVPPLIRAALAAAADAPG-----YPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92 (357)
T ss_pred CCCCeEEccCCCC-CCCCCHHHHHHHHHHHhhCC-----CCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH
Confidence 4567899988763 23346788888876654321 122345556666666666555453 345555566788
Q ss_pred HHhhhhhh-ccCCCEEEeCCCchHHHHHHHHhcCCeEEEec------------------CC------CHHHHHHHHHhhc
Q 013461 182 MFSAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK------------------HN------DMDSLRNTLERVT 236 (442)
Q Consensus 182 ~~~ai~a~-~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~------------------~~------d~~~Le~~l~~~~ 236 (442)
+..++.++ +++||.|++++++|..+...++..|++++.++ +| +.+.++++++...
T Consensus 93 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~l~~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~ 172 (357)
T TIGR03539 93 VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADDPTELDPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWAR 172 (357)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCChhhcCccCccEEEEeCCCCCcCccCCHHHHHHHHHHHH
Confidence 88877877 79999999999999998888888887776552 11 1223333332211
Q ss_pred ccccc-----cccccccccCCCccccc--cCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCC
Q 013461 237 ADNKR-----SNSFGVLGRSGRGLTEH--CGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSAS 306 (442)
Q Consensus 237 ~~~~~-----a~~~g~~G~~g~g~~~~--~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s 306 (442)
+.... ++..-.++......... .+.. .+..|+++||||++|++| ||+++++++++.++....... .+
T Consensus 173 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~~~--~~ 249 (357)
T TIGR03539 173 ERGAVVASDECYLELGWEGRPVSILDPRVCGGD-HTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAG--LM 249 (357)
T ss_pred HcCeEEEEecchhhhccCCCCccceecccCCCc-cccEEEEeccccccCCCceeEEEEecCHHHHHHHHHHHhhcc--cC
Confidence 11000 11100011111010000 0001 134699999999997665 999999999988765432222 23
Q ss_pred CcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHH
Q 013461 307 LPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWAL 386 (442)
Q Consensus 307 ~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L 386 (442)
.+++...++.++++........++.++++++++.+.|.+. |+.+..+..+.++++.++. + ..++.+. |
T Consensus 250 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~~~~~~~-------~---~~~~~~~-l 317 (357)
T TIGR03539 250 VPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLWATRGE-------D---AWDTVDR-L 317 (357)
T ss_pred CCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEEEEECCC-------C---HHHHHHH-H
Confidence 3455555555666432223446778888899999999885 7776544344455555421 1 2346664 5
Q ss_pred HhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 387 KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 387 ~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
.++||.+.++.++... .+..+||+++. +++++++++++|
T Consensus 318 ~~~gV~v~pg~~f~~~---~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 318 AELGILVAPGDFYGPA---GSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred HhCCEEECCccccCCC---CCCeEEEEecC--CHHHHHHHHHhh
Confidence 6679999998754311 13569999986 689999998876
No 203
>PRK03321 putative aminotransferase; Provisional
Probab=99.80 E-value=2.1e-17 Score=162.64 Aligned_cols=286 Identities=15% Similarity=0.132 Sum_probs=186.5
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC-cEEEEcchH-HHHHhhhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYGL-STMFSAIP 187 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e-~~i~~~sG~-~a~~~ai~ 187 (442)
.+|||+++. ..++.+|.+.+++.+.+.... .+ + .....++++.+|++++.+ +.|++++|+ +++..++.
T Consensus 23 ~~i~l~~~~-~~~~~~~~~~~a~~~~~~~~~-~y-------~-~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~ 92 (352)
T PRK03321 23 GAIKLSSNE-TPFGPLPSVRAAIARAAAGVN-RY-------P-DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQ 92 (352)
T ss_pred cceeccCCC-CCCCCCHHHHHHHHHHHHhcC-cC-------C-CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHH
Confidence 579998774 245556899999988776421 11 1 123578999999999864 345555665 66777778
Q ss_pred hhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc---------------------
Q 013461 188 CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR--------------------- 241 (442)
Q Consensus 188 a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~--------------------- 241 (442)
+++++||.|+++.+.+..+...++..|.+++.++.+ |++++++.++..++....
T Consensus 93 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~ 172 (352)
T PRK03321 93 ATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLD 172 (352)
T ss_pred HhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHH
Confidence 889999999999998888777788889998887754 566776666432211000
Q ss_pred c--ccccccccCCC-ccc--c-----ccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCc
Q 013461 242 S--NSFGVLGRSGR-GLT--E-----HCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLP 308 (442)
Q Consensus 242 a--~~~g~~G~~g~-g~~--~-----~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~ 308 (442)
. +++-++-+.-. .+. . .......+..++++||||++|++| ||+++++++++.++..... .+.+
T Consensus 173 ~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~----~~~s 248 (352)
T PRK03321 173 AVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVP----FSVN 248 (352)
T ss_pred hCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCC----CCCC
Confidence 1 12211111000 000 0 000112245788999999998776 9999999999988765322 2345
Q ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHh
Q 013461 309 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKE 388 (442)
Q Consensus 309 p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~ 388 (442)
++.+.++.++++..+...+..+++.++++++.+.|.+. |+.+. ++.++++++.++. + ..++++. |++
T Consensus 249 ~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~-------~---~~~~~~~-l~~ 315 (352)
T PRK03321 249 SLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGE-------R---TADFAAA-AAE 315 (352)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCC-------C---HHHHHHH-HHH
Confidence 66666666676533333344555566667788888875 76654 3467888887632 1 2357775 566
Q ss_pred CCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 389 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 389 ~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
+||.+.+.. +++|||+++ +.+++++++++|++++
T Consensus 316 ~gI~v~~~~---------~~~iRi~~~---~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 316 AGVVVRPFA---------GEGVRVTIG---APEENDAFLRAARAWR 349 (352)
T ss_pred CCEEEEccC---------CCcEEEeeC---CHHHHHHHHHHHHHHh
Confidence 799998631 134999985 8899999999999865
No 204
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.80 E-value=8.3e-17 Score=158.84 Aligned_cols=293 Identities=13% Similarity=0.037 Sum_probs=188.4
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhh
Q 013461 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSA 185 (442)
Q Consensus 109 ~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~a 185 (442)
.+++||+.+ |. +..+|.+++++.+.+... ..+ +... ..+|++.||++++. +++++++++.+++..+
T Consensus 22 ~~~i~l~~~~n~--~~~~~~~~~a~~~~~~~~-~~Y-------~~~~-~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~ 90 (360)
T PRK07392 22 DAILDFSASINP--LGPPESVIAAIQSALSAL-RHY-------PDPD-YRELRLALAQHHQLPPEWILPGNGAAELLTWA 90 (360)
T ss_pred ccEEEeCCcCCC--CCCCHHHHHHHHHHHHHh-hcC-------CCcC-HHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 468999876 43 446789999988877641 111 1111 25899999999974 3556666667888888
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHhhcccc---------cc--------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-------MDSLRNTLERVTADN---------KR-------- 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d-------~~~Le~~l~~~~~~~---------~~-------- 241 (442)
+.++. +||.|+++.++|..+...++..|.+++.++..+ ..+++++.+...... +.
T Consensus 91 ~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~~~~~ 169 (360)
T PRK07392 91 GRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHNPTGKLWSREA 169 (360)
T ss_pred HHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCCCCCCCcCHHH
Confidence 88764 688999999999999999999999998876531 234555544322110 00
Q ss_pred ------cccccccccCCCccc------ccc-CCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccC
Q 013461 242 ------SNSFGVLGRSGRGLT------EHC-GVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSA 305 (442)
Q Consensus 242 ------a~~~g~~G~~g~g~~------~~~-~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~ 305 (442)
.+++-+..+....+. ... -++..+..|+++||||++|++| ||+++++++++.+...... .
T Consensus 170 l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~~----~ 245 (360)
T PRK07392 170 ILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRDP----W 245 (360)
T ss_pred HHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCCC----C
Confidence 222222221111100 000 0112345799999999999777 9999999999887654321 2
Q ss_pred CCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHH
Q 013461 306 SLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWA 385 (442)
Q Consensus 306 s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~ 385 (442)
+.+.+.+.++.++++..+.....++.++++++++.+.|+.++|+.+.. +.+.++++.+.. ...++++.+
T Consensus 246 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~----------~~~~l~~~l 314 (360)
T PRK07392 246 PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG----------SALQLQEKL 314 (360)
T ss_pred CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC----------CHHHHHHHH
Confidence 345666666666665322223345677888899999998877877653 567777776532 123577766
Q ss_pred HHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 386 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 386 L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
++++||.+.++..+... .+..+||+++ +.++.+++.++|++++
T Consensus 315 l~~~gv~v~pg~~f~~~---~~~~iRi~~~---~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 315 LQQHRILIRDCLSFPEL---GDRYFRVAVR---TEAENQRLLEALAAIL 357 (360)
T ss_pred HhhCCEEEEeCCCCCCC---CCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 77789999988764211 1346999997 4566677777776654
No 205
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=5.3e-17 Score=161.01 Aligned_cols=295 Identities=14% Similarity=0.157 Sum_probs=186.3
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--------C--CcEEEEcch
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------T--PDSILYSYG 178 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~--e~~i~~~sG 178 (442)
.++++|++|.. .+..+|.+++++.+.+.. +.....+. .....+|++.||++++ . +++++++++
T Consensus 28 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~Y~-----~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga 100 (374)
T PRK02610 28 IQLDRLDTNEF-PYDLPPDLKQKLAWLYQQ-GIESNRYP-----DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGS 100 (374)
T ss_pred cceeEecCCCC-CCCCCHHHHHHHHHHHhh-cccccCCC-----CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCCh
Confidence 45899988753 566678999999987765 11111111 1123678888888876 2 245555555
Q ss_pred HHHHHhhhhhhccCCC-EEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhh---ccc--------cc
Q 013461 179 LSTMFSAIPCFCKKGD-LIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERV---TAD--------NK 240 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd-~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~---~~~--------~~ 240 (442)
.+++..++.+++.+|| .|+++.++|..+...++..|.+++.++.+ |+++|++.+++. ..+ ++
T Consensus 101 ~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NP 180 (374)
T PRK02610 101 DELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSP 180 (374)
T ss_pred HHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCC
Confidence 6888888888888886 89999999999999999999999888632 567888777541 111 11
Q ss_pred c---------------cccccccccCCC-ccccc---cCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhC
Q 013461 241 R---------------SNSFGVLGRSGR-GLTEH---CGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSS 298 (442)
Q Consensus 241 ~---------------a~~~g~~G~~g~-g~~~~---~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~ 298 (442)
. ++++-++-+.-. .+... ..+...+..|+++||||++|++| ||+++++++++.+....
T Consensus 181 TG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~ 260 (374)
T PRK02610 181 TGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVR 260 (374)
T ss_pred CCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhc
Confidence 0 222212111100 00000 01111223578999999998877 99999999999887654
Q ss_pred CceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHH
Q 013461 299 SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLL 378 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 378 (442)
.. ++ .+.+...++.++++..+...+.+.+..+.++.+.+.|++++++.+. ++.+.++|+.++... ..
T Consensus 261 ~~--~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~--------~~ 327 (374)
T PRK02610 261 LP--YN--LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-PSAANFLYLRLSQDA--------AL 327 (374)
T ss_pred CC--CC--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCC--------CH
Confidence 22 22 3455555555666533222223334444567777888776677654 457778888774321 12
Q ss_pred HHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 379 EDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 379 ~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.++++. |.++||.+.+. ++.+||++. +.+++++++++|++++.++
T Consensus 328 ~~~~~~-l~~~gi~v~~~----------~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 328 AALHQA-LKAQGTLVRHT----------GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred HHHHHH-HHHCCEEEEeC----------CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 356665 55679998652 234999987 4678999999999887643
No 206
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=6e-17 Score=159.70 Aligned_cols=290 Identities=15% Similarity=0.117 Sum_probs=184.3
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHh
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFS 184 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~ 184 (442)
+|.++|||+.+.. .++.+|.+.+++.+.++.. .+++ + ....+|++.+|++++. ++.++++++++++..
T Consensus 28 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~Y~-~-------~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 28 DPDDLVKLSSNEN-PHGPSPAAVEAIREAAERV-HSYP-K-------ASHADLTAALADRWDVSPEQVWLANGGDGALDY 97 (357)
T ss_pred CccceeEecCCCC-CCCCCHHHHHHHHHHHhhh-hcCC-C-------CCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 4678999988742 3445688999988877541 1111 0 1246899999999984 345556666689999
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC---CHH-HHHHHHHhhcc-c--------ccc----------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN---DMD-SLRNTLERVTA-D--------NKR---------- 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~---d~~-~Le~~l~~~~~-~--------~~~---------- 241 (442)
++.+++++||.|++++++|..+.......|..++.++.. +.+ +++++.+.... + ++.
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~ 177 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIPLDEVE 177 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCCCCCcCCCHHHHH
Confidence 999999999999999999887777777788887766542 111 22333322211 0 000
Q ss_pred -----c-ccccccccCC-Cccc---ccc-CCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCC
Q 013461 242 -----S-NSFGVLGRSG-RGLT---EHC-GVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASL 307 (442)
Q Consensus 242 -----a-~~~g~~G~~g-~g~~---~~~-~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~ 307 (442)
+ ++.-++-+.- ..+. ... .++..+..++++||||++|++| ||+++++++++.+...... .+.
T Consensus 178 ~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~----~~~ 253 (357)
T PRK14809 178 ALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNTP----FAA 253 (357)
T ss_pred HHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCCC----CCC
Confidence 1 1111111110 0000 000 1112345788999999999877 9999999999988764322 234
Q ss_pred cHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 308 PPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 308 ~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
+++.+.++.++++.-+..++.++.++++++++.+.|... .+ ++.+.++++.+.+ ..++++. |+
T Consensus 254 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~----~~~g~f~~~~~~~-----------~~~~~~~-l~ 316 (357)
T PRK14809 254 SELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-TW----ESAGNFVLAEVGD-----------ASAVAEA-AQ 316 (357)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-cC----CCCCCEEEEECCC-----------HHHHHHH-HH
Confidence 566666666666432222345667777778888877643 22 3567788887621 2356665 55
Q ss_pred hCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 388 ~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
++||.+.++..+.. ++.+||++. +++++++++++|+++++
T Consensus 317 ~~gv~v~~g~~f~~-----~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 317 ERGVIVRDCTSFGL-----PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred HCCEEEEECccCCC-----CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 67999999876532 356999975 57999999999988753
No 207
>PRK09265 aminotransferase AlaT; Validated
Probab=99.79 E-value=5.4e-17 Score=162.65 Aligned_cols=311 Identities=14% Similarity=0.142 Sum_probs=186.4
Q ss_pred CCeeEEEeecCCC--CCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh------CC--CcEEEEc
Q 013461 107 SGKEVVNFASANY--LGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL------GT--PDSILYS 176 (442)
Q Consensus 107 ~G~~~id~~s~~~--l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~------g~--e~~i~~~ 176 (442)
.|++++||+.++. .++..++++.+++.+.+... ..+ +......+|++.+|+++ +. +++++++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~-~~Y-------~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~ 102 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA-QGY-------SDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGN 102 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC-CCC-------CCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeC
Confidence 4678899977543 25556788988888776531 112 22222357888888876 32 3455555
Q ss_pred chHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhcccc-------cc-
Q 013461 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADN-------KR- 241 (442)
Q Consensus 177 sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~~-------~~- 241 (442)
++++++..++.+++++||.|++++++|..+...+...|.+++.++. .|++++++.+...++.. +.
T Consensus 103 G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG 182 (404)
T PRK09265 103 GVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTG 182 (404)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCC
Confidence 5568888899999999999999999999988888888888776642 24667776654322110 00
Q ss_pred ----------------cccccccccC-CCcc-------ccccCCCCCceeEEEEeccccccCCC---cEEEc--CHH---
Q 013461 242 ----------------SNSFGVLGRS-GRGL-------TEHCGVPVDKIDIVTAAMGHALATEG---GFCTG--SAR--- 289 (442)
Q Consensus 242 ----------------a~~~g~~G~~-g~g~-------~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g--~~~--- 289 (442)
.|++-++-+. ...+ .......++...|+++||||++|++| ||+++ +++
T Consensus 183 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~ 262 (404)
T PRK09265 183 AVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAK 262 (404)
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHH
Confidence 2222221111 0000 00011122334678899999998776 99884 444
Q ss_pred -hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHH---HHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 013461 290 -VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDL---ITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 365 (442)
Q Consensus 290 -~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~---~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~ 365 (442)
+++.+..... ...+.+.+...++.+++...+...+. .+++.++++.+.+.|++++++++..+..+.++|+.++
T Consensus 263 ~~~~~~~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~ 339 (404)
T PRK09265 263 GYIEGLDMLAS---MRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLD 339 (404)
T ss_pred HHHHHHHHHhc---cccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEec
Confidence 3333332211 11123444444555555321111112 2467777888888898776777665556778887774
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 366 KSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
........+ .+.+.+.+.++||.+.++..+... .+..+|+++. .+++++++++++|+++++..
T Consensus 340 ~~~~~~~~~----~~~~~~~l~~~gv~v~pg~~F~~~---~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 340 PKVYPIHDD----EQFVLDLLLQEKVLLVQGTGFNWP---EPDHFRIVTL--PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred ccccCCCCH----HHHHHHHHHhCCEEEECchhhCCC---CCCeEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 321000001 133334566779999988665311 1346999995 58999999999999987654
No 208
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.79 E-value=7.2e-17 Score=157.27 Aligned_cols=278 Identities=12% Similarity=0.067 Sum_probs=179.3
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhh
Q 013461 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (442)
Q Consensus 109 ~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~ 187 (442)
.++|||++| |+++....+ +.+ ..+..|..+. .+|++.||+++|.++.++++++.+++..++
T Consensus 20 ~~~i~l~~ne~p~~~~~~~-~~~---~~~~~yp~~~-------------~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~- 81 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPVPA-IPA---DAWARLPETD-------------DGLEAAARAYYGAPQLLPVAGSQAAIQALP- 81 (330)
T ss_pred HHheeecCCcCCCCCCCcc-cCH---HHHHhCCCCh-------------HHHHHHHHHHhCCCCEEECcCHHHHHHHHH-
Confidence 468999888 777765332 322 3445554211 589999999999988777777778887765
Q ss_pred hhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhc------ccccc-----------------ccc
Q 013461 188 CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVT------ADNKR-----------------SNS 244 (442)
Q Consensus 188 a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~------~~~~~-----------------a~~ 244 (442)
.+.+||.|+++.++|+.+...++..|++++.++. +++++.++... +.++. .++
T Consensus 82 -~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~---~~~~~~~~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~ 157 (330)
T PRK05664 82 -RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE---AEVEAALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARG 157 (330)
T ss_pred -HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech---hhHhhhhcCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcC
Confidence 3589999999999999999999999999888753 33444332110 11110 122
Q ss_pred ccccccCCC-cc---ccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHH
Q 013461 245 FGVLGRSGR-GL---TEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAIT 317 (442)
Q Consensus 245 ~g~~G~~g~-g~---~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~a 317 (442)
.-++-+.-. .. .......+.+..++++||||++|++| ||+++++++++.+......+ +.+.....++.+
T Consensus 158 ~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~----~~~~~~~~~~~~ 233 (330)
T PRK05664 158 GWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPW----TVSGPTRWLAQA 233 (330)
T ss_pred CEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCC----CCCHHHHHHHHH
Confidence 222211100 00 01112223345689999999999888 99999999999887654332 224454555666
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeecc
Q 013461 318 AIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK 397 (442)
Q Consensus 318 al~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~ 397 (442)
+|+........+++++++++++.+.|++. |++..+ +.+.++++.++ + ..++.+. |.++||.|....
T Consensus 234 ~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~-~~~~f~~~~~~--------~---~~~~~~~-l~~~gi~v~~f~ 299 (330)
T PRK05664 234 ALADTPWQRRQRERLLAASQRLAALLRRH-GLTPAG-GCALFQWVRTE--------D---AAALHEF-LARRGILTRLFE 299 (330)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC-CcceEEEEecC--------C---HHHHHHH-HHHCCeEEEECC
Confidence 66543333457788889999999999886 654321 12234444431 1 2356665 556799997532
Q ss_pred CcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 398 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 398 ~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.++.+||+++. ++++++++.++|+++.++
T Consensus 300 --------~~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 300 --------QPASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred --------CCCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 13569999985 678899999999877544
No 209
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.79 E-value=1.2e-17 Score=167.07 Aligned_cols=303 Identities=13% Similarity=0.054 Sum_probs=177.6
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCc--cCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHH-HHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCG--PRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLS-TMF 183 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~--~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~-a~~ 183 (442)
+.+++++.++ +|+. +|++++++.++. ..-..++. +....|..+.+.++++.+++++|.+ +++++++|+. ++.
T Consensus 20 ~~~~~l~~g~-~~~~-~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~ 96 (398)
T cd00613 20 QSMSFLGSGT-YKHN-PPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEA 96 (398)
T ss_pred cCcccccccc-cCCc-CcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHH
Confidence 3456666555 4665 455555544443 21111211 1114577889999999999999976 6767776664 444
Q ss_pred hhhhhhccC--CCEEEeCCCchHHHHHHHHhcC----CeEEEecCC-----CHHHHHHHHHhhcccccc-----------
Q 013461 184 SAIPCFCKK--GDLIVADEGVHWGIQNGLYLSR----STVVYFKHN-----DMDSLRNTLERVTADNKR----------- 241 (442)
Q Consensus 184 ~ai~a~~~~--gd~Vi~~~~~h~s~~~~~~l~g----~~v~~~~~~-----d~~~Le~~l~~~~~~~~~----------- 241 (442)
.+..+...+ ||+|++++++|+++...+...+ ++++.++++ |++++++.+.+.+.....
T Consensus 97 ~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~~~G~~~~ 176 (398)
T cd00613 97 AGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPNTLGVFED 176 (398)
T ss_pred HHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCCCCceecc
Confidence 444555565 9999999999999988888777 888888764 456777665432211100
Q ss_pred ----------ccccccccc--CCCccccccCCCCCceeEEEEecccccc------CCCcEEEcCHHhHHHHHhh------
Q 013461 242 ----------SNSFGVLGR--SGRGLTEHCGVPVDKIDIVTAAMGHALA------TEGGFCTGSARVVDHQRLS------ 297 (442)
Q Consensus 242 ----------a~~~g~~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg------~~GG~v~g~~~~i~~l~~~------ 297 (442)
.|+.-++-+ ++.+. ........++|++++|++|+++ ..+||++.++++++.+...
T Consensus 177 ~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~ 255 (398)
T cd00613 177 LIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTK 255 (398)
T ss_pred hHHHHHHHHHhcCCEEEEEecccccc-CCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeecccc
Confidence 111111111 11011 0011112357999999999982 2347999998887764211
Q ss_pred -----------------------CCceeccCCCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceee
Q 013461 298 -----------------------SSGYVFSASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIA 352 (442)
Q Consensus 298 -----------------------~~~~~~s~s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 352 (442)
+..+++ +.++..++++.++++.+.+ .++++++++++++++++.|+++++....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~r~e~~~~~~~--~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 333 (398)
T cd00613 256 DAEGNRAFRLALQTREQHIRREKATSNIC--TGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPF 333 (398)
T ss_pred ccCCCcceEEecccchhhcccccccccce--ecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 001111 1234444455555555432 2457789999999999999887443321
Q ss_pred cCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 353 SNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 353 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
..+..+.+.+.+... ......++++.+ .++||.+.... +. .+..||++++..+|++|||+++++|
T Consensus 334 ~~~~~~~v~~~~~~~------~~~~~~~~~~~L-~~~gi~~~~~~-~~-----~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 334 NGPFFHEFVLRLPPL------YGIRAEDLAKAL-IDGGFHAPTMY-LP-----VDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCCeeEEEEEEcCCc------chHHHHHHHHhh-hhcCccccccc-cC-----CCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 112223344444211 012345677764 45699865432 10 1245999999999999999998864
No 210
>PLN02672 methionine S-methyltransferase
Probab=99.78 E-value=1.8e-16 Score=170.43 Aligned_cols=312 Identities=13% Similarity=0.131 Sum_probs=199.8
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC----cEEEEcchH-HH
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP----DSILYSYGL-ST 181 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e----~~i~~~sG~-~a 181 (442)
+|.++|+|..|.. .++.+|.+++++.+.+.++.. .+|..++...+++.+++.+|.+ +.|++++|+ ++
T Consensus 695 ~g~~vI~LsinE~-d~ppPp~V~eAi~eal~~~~~-------s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 695 QESSLIHMDVDES-FLPVPSAVKASIFESFVRQNI-------SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CCCCEEEEeCCCC-CCCCCHHHHHHHHHHHhhcCC-------CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 4778999987752 455679999999988866422 2345677889999999988842 246666665 66
Q ss_pred HHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhc--------cc-ccc----
Q 013461 182 MFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVT--------AD-NKR---- 241 (442)
Q Consensus 182 ~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~--------~~-~~~---- 241 (442)
+..++.+++++||.|+++.++|+.+...++..|++++.++.+ |.+.+++.++..+ +. ++.
T Consensus 767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~ 846 (1082)
T PLN02672 767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLY 846 (1082)
T ss_pred HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccC
Confidence 777889999999999999999999999999999999888743 4567877775421 11 111
Q ss_pred -------------cccccccccCCCc-c------------c---cccC-CCCCceeEEEEeccccccCCC---cEEEcC-
Q 013461 242 -------------SNSFGVLGRSGRG-L------------T---EHCG-VPVDKIDIVTAAMGHALATEG---GFCTGS- 287 (442)
Q Consensus 242 -------------a~~~g~~G~~g~g-~------------~---~~~~-v~~~~~diii~S~sK~lg~~G---G~v~g~- 287 (442)
.|++-++-+.-.. + . ..++ ..+....|+++||||.++++| ||++++
T Consensus 847 S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~ 926 (1082)
T PLN02672 847 SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND 926 (1082)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC
Confidence 2222222111110 0 0 0000 001235688999999998877 999986
Q ss_pred HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHH-----HHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE
Q 013461 288 ARVVDHQRLSSSGYVFSASLPPYLASAAITAID-----VLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL 362 (442)
Q Consensus 288 ~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~-----~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~ 362 (442)
+++++.++... .+....+.+.++++++++++. +.+...+.++.++++++++.+.|++. |+++..+..+.++|+
T Consensus 927 ~eLi~~l~~~~-~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl 1004 (1082)
T PLN02672 927 SVLIDAFHSAP-GLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVA 1004 (1082)
T ss_pred HHHHHHHHHhh-hhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEE
Confidence 45888886532 111111112333333333221 11122346677899999999999986 888765444555565
Q ss_pred EecCCCC-----Cchh---h-HHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 363 ILEKSTG-----SMKN---D-LQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 363 ~~~~~~~-----~~~~---~-~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.+....+ .... + .....++++.++++.||.+.++..+.. ++.+||++.. +++++++++++|+++
T Consensus 1005 ~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~-----~g~~RIsfa~--~~e~LeeALerL~kf 1077 (1082)
T PLN02672 1005 KPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI-----PGYCRFSFAL--EDSEFDRALKAIARF 1077 (1082)
T ss_pred EccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC-----CCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 5421000 0000 0 012357888877777999999865432 4569999984 789999999999986
Q ss_pred HH
Q 013461 434 SA 435 (442)
Q Consensus 434 ~~ 435 (442)
..
T Consensus 1078 ~~ 1079 (1082)
T PLN02672 1078 KE 1079 (1082)
T ss_pred HH
Confidence 54
No 211
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.78 E-value=9.4e-17 Score=156.64 Aligned_cols=253 Identities=13% Similarity=0.126 Sum_probs=160.8
Q ss_pred HHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q 013461 156 HLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLE 233 (442)
Q Consensus 156 ~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~ 233 (442)
..+|++++|+++|.+ ++++++++++++..++. +.++|++|+. +++|..+...++..|++++.++.++.+...+.++
T Consensus 42 ~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~vv~~-~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~ 119 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGNIIIV-EPNFNEYKGYAFTHGIRISALPFNLINNNPEILN 119 (332)
T ss_pred HHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCcEEEe-CCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHh
Confidence 479999999999953 45555555688888876 5678876666 7899999999999999999887542111122332
Q ss_pred hhccc--------ccc-----------------cccccccccCCCc-cc-----cccC-CCCCceeEEEEeccccccCCC
Q 013461 234 RVTAD--------NKR-----------------SNSFGVLGRSGRG-LT-----EHCG-VPVDKIDIVTAAMGHALATEG 281 (442)
Q Consensus 234 ~~~~~--------~~~-----------------a~~~g~~G~~g~g-~~-----~~~~-v~~~~~diii~S~sK~lg~~G 281 (442)
+...+ ++. .|+.-++-+.-.+ +. .... .+..+..|+++||||++|++|
T Consensus 120 ~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G 199 (332)
T PRK06425 120 NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPS 199 (332)
T ss_pred hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCch
Confidence 21111 110 2232222111000 00 0000 111245799999999999887
Q ss_pred ---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCC
Q 013461 282 ---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESP 358 (442)
Q Consensus 282 ---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~ 358 (442)
||+++++++++.+......+ +.+..+++ ++.........+..++.++++++++.+.|++. |+++..++.+.
T Consensus 200 lRiGy~v~~~~li~~l~~~~~~~----~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~ 273 (332)
T PRK06425 200 LRIGYIATDDYNMKISRKITEPW----SVCDPAID-FIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSAN 273 (332)
T ss_pred hhheeeecCHHHHHHHHHcCCCC----ccCHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCce
Confidence 99999999999887643332 12233222 22222211112346788899999999999987 78775455778
Q ss_pred EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 359 IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 359 i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
++++.+++ ..++++.+++ +||.+.++..+... .++.+||++. +.+|+++++++|++++
T Consensus 274 f~~~~~~~-----------~~~~~~~l~~-~gi~v~~~~~f~~~---~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 274 FITFMIPD-----------AHDFYSYLLK-NGILVRLLDDYECL---GEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEEEEcCC-----------HHHHHHHHHH-CCeEEEECCCCCCC---CCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 88887631 2367776554 69999987654211 0246999997 7899999999998764
No 212
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.78 E-value=1.3e-16 Score=158.65 Aligned_cols=300 Identities=18% Similarity=0.101 Sum_probs=185.4
Q ss_pred ChHHHHHHHHHHHhc-CCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhc---cCCCEEEe
Q 013461 125 HEKLLESCTSALEKY-GVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFC---KKGDLIVA 198 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~-g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~---~~gd~Vi~ 198 (442)
++.+.+++.+.+..+ +.....+....-..+..+++++.+++++|.+ +++++++|++++..++.++. .+||.|++
T Consensus 12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~ 91 (379)
T TIGR03402 12 DPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIIT 91 (379)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 578999999888653 3322111100112456788999999999964 46777788899988887653 45789999
Q ss_pred CCCchHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhcccccc---------------------cccccccc
Q 013461 199 DEGVHWGIQNG---LYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR---------------------SNSFGVLG 249 (442)
Q Consensus 199 ~~~~h~s~~~~---~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~---------------------a~~~g~~G 249 (442)
....|++.... +...|.+++.++. .|++++++.+++.+.-... .|+.-++-
T Consensus 92 ~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~viv 171 (379)
T TIGR03402 92 TAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHT 171 (379)
T ss_pred cccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEE
Confidence 99999876543 3345888887764 2677888777543221100 22211111
Q ss_pred c--CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCC-ce----eccCCCcHHHHHHHHHHHHH
Q 013461 250 R--SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSS-GY----VFSASLPPYLASAAITAIDV 321 (442)
Q Consensus 250 ~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~-~~----~~s~s~~p~~aaaa~aal~~ 321 (442)
+ .+.|.. ..++...++|+++.|.+|.+|..| |+++.+++.. +..... ++ ...++.+.....+..++++.
T Consensus 172 D~~~~~g~~-~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~ 248 (379)
T TIGR03402 172 DAVQAVGKI-PIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAEL 248 (379)
T ss_pred ECccccccc-ccCcccCCCCEEEEcHHHcCCCCceEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHH
Confidence 1 111111 123333468999999999667655 7877765531 111100 00 01223344444455567776
Q ss_pred Hhc-ChHHHHHHHHHHHHHHHhhcc-CCCceeecCCC---CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeec
Q 013461 322 LEE-NPDLITKLKKNTAILRTGLSD-IHGLSIASNPE---SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTS 396 (442)
Q Consensus 322 l~~-~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~ 396 (442)
+.+ .++..++.+++.+++++.|.+ ++++++.+++. +.++.+.+... + ..+++. .|+++||.++.+
T Consensus 249 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~-~l~~~gI~v~~g 318 (379)
T TIGR03402 249 ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYI------E---GEAILL-LLDMEGICASSG 318 (379)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCC------C---HHHHHH-hhccCCEEEEch
Confidence 653 244567888889999999985 77887765322 23666666422 1 135666 467789999987
Q ss_pred cCcccccCC--------------CCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 397 KRSMLDKCR--------------LPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 397 ~~~~~~~~~--------------~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
..+...... .+..+|+|++..+|++|||+++++|+++++++
T Consensus 319 ~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 319 SACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred hhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 654322110 12459999999999999999999999988764
No 213
>PRK05839 hypothetical protein; Provisional
Probab=99.78 E-value=1.7e-16 Score=157.45 Aligned_cols=301 Identities=14% Similarity=0.068 Sum_probs=179.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC----CCcEEEEcchHHHHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG----TPDSILYSYGLSTMF 183 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g----~e~~i~~~sG~~a~~ 183 (442)
|++++||+.++. .++.++.+.+++.+..... ..++ ...|..++++.+++.+++.+| .+++++++++.+++.
T Consensus 23 ~~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~-~~Y~---~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~ 97 (374)
T PRK05839 23 EYKGLDLTIGEP-QFETPKFIQDALKNNAHLL-NKYP---KSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF 97 (374)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHhhcc-CCCC---CCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 779999988753 3555678888877665431 1222 223455566666666666656 234555555567887
Q ss_pred hhhhhhc--cCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhh------cccccc---------
Q 013461 184 SAIPCFC--KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERV------TADNKR--------- 241 (442)
Q Consensus 184 ~ai~a~~--~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~------~~~~~~--------- 241 (442)
.++.+++ ++||.|+++.++|..+...+...|++++.++.+ +++..+..++.. .+.++.
T Consensus 98 ~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~~~~k~v~i~nP~NPTG~~~s~~~l 177 (374)
T PRK05839 98 NFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEEL 177 (374)
T ss_pred HHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhhccccEEEEeCCCCCcCcccCHHHH
Confidence 7777664 689999999999999998889999998887642 111111111110 001110
Q ss_pred --------cccccccccCCC-ccc------cccC------CCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhh
Q 013461 242 --------SNSFGVLGRSGR-GLT------EHCG------VPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLS 297 (442)
Q Consensus 242 --------a~~~g~~G~~g~-g~~------~~~~------v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~ 297 (442)
.|++-++-+.-. .+. .... ....+..|+++||||++|++| ||+++++++++.++..
T Consensus 178 ~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~ 257 (374)
T PRK05839 178 IEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAY 257 (374)
T ss_pred HHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHH
Confidence 122222211100 000 0000 001145799999999998776 9999999999887654
Q ss_pred CCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHH
Q 013461 298 SSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQL 377 (442)
Q Consensus 298 ~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 377 (442)
.....+ +.+.+...++.+++..-+..++++++++++.+.+.+.| ++. .++.+.++|+.+++
T Consensus 258 ~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~~----------- 318 (374)
T PRK05839 258 RTYLGC--ASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVDN----------- 318 (374)
T ss_pred HhhcCC--CCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCCC-----------
Confidence 322112 22334444444444321122346777777877777655 222 24467777777631
Q ss_pred HHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 378 LEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 378 ~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
..++++++++++||.+.++..+..+.. .++.+||+++. +++++++++++|++++.
T Consensus 319 ~~~~~~~l~~~~gi~v~pg~~f~~~~~-~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 319 DEEFTKKLYQNEGIKVLPGSFLGRNGI-GKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred hHHHHHHHHHHCCEEEeCchhhCCCCC-CCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 125777766667999999865432111 14569999974 78999999999988763
No 214
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.78 E-value=3.5e-16 Score=154.17 Aligned_cols=294 Identities=13% Similarity=0.076 Sum_probs=183.3
Q ss_pred ECCeeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHH
Q 013461 106 ISGKEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTM 182 (442)
Q Consensus 106 ~~G~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~ 182 (442)
.++++++||+.| +. ++.+|.+++++.+.+.... . |... ...++++.+|++++. +++++++++++++
T Consensus 17 ~~~~~~i~l~~~~~~--~~~p~~~~~a~~~~~~~~~-~-------y~~~-~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l 85 (356)
T PRK08056 17 ISPDQLLDFSANINP--LGMPVSLKRAIIDNLDCAE-R-------YPDV-EYRHLHQALARHHQVPASWILAGNGETESI 85 (356)
T ss_pred CChhhEEEeccccCC--CCCCHHHHHHHHHHHHhcc-c-------CcCc-cHHHHHHHHHHHhCcChhhEEECCCHHHHH
Confidence 356789999876 44 4457899999988876531 1 1111 257999999999985 3455555556888
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHH-HHHHHHHhhccc-------ccc--------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMD-SLRNTLERVTAD-------NKR-------- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~-~Le~~l~~~~~~-------~~~-------- 241 (442)
..++.++ .+||+|+. .+.+..+...++..|.+++.++.. +++ ++++.+...++. ++.
T Consensus 86 ~~~~~~l-~~g~viv~-~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~ 163 (356)
T PRK08056 86 FAVVSGL-KPRRAMIV-TPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQL 163 (356)
T ss_pred HHHHHHh-CCCCEEEe-CCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHH
Confidence 8877776 67886554 567777778888899998887642 121 232323211110 000
Q ss_pred ---------cccccccccC-CCccc-c---cc-CCCCCceeEEEEeccccccCCC---cEEEc-CHHhHHHHHhhCCcee
Q 013461 242 ---------SNSFGVLGRS-GRGLT-E---HC-GVPVDKIDIVTAAMGHALATEG---GFCTG-SARVVDHQRLSSSGYV 302 (442)
Q Consensus 242 ---------a~~~g~~G~~-g~g~~-~---~~-~v~~~~~diii~S~sK~lg~~G---G~v~g-~~~~i~~l~~~~~~~~ 302 (442)
.|+.-++-+. ...+. + +. -+...+.+++++||||++|++| ||+++ ++++++.++.....
T Consensus 164 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~-- 241 (356)
T PRK08056 164 LQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMP-- 241 (356)
T ss_pred HHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC--
Confidence 2222222111 00110 0 00 0111346799999999999776 99997 46787877653222
Q ss_pred ccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHH
Q 013461 303 FSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIA 382 (442)
Q Consensus 303 ~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~ 382 (442)
.+.+.+.+.++.++++.-....+.++.++++++++.+.|++++++.+. +++++++++.+..+ ..+++
T Consensus 242 --~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~ 308 (356)
T PRK08056 242 --WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP----------DIDLQ 308 (356)
T ss_pred --CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC----------hHHHH
Confidence 223455555555555321112345778889999999999887777765 45788888776421 12577
Q ss_pred HHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 383 DWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 383 ~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
+.++ ++||.+.++..+.. ..++.+||+++ ++++.+.++++|++++
T Consensus 309 ~~l~-~~gI~v~~~~~f~~---~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 309 RALL-TQRILIRSCANYPG---LDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred HHHH-HCCeEEEECCCCCC---CCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 7655 56999998765421 11346999996 7899999999998764
No 215
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.77 E-value=7.5e-17 Score=160.65 Aligned_cols=320 Identities=14% Similarity=0.094 Sum_probs=196.5
Q ss_pred CCeeEEEeecC-CCCCCCCC---hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHH
Q 013461 107 SGKEVVNFASA-NYLGLIGH---EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTM 182 (442)
Q Consensus 107 ~G~~~id~~s~-~~l~~~~~---p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~ 182 (442)
.|...++|.+. -|..+..+ ..+.+++.+++..-...++++ ....+||+.+++++|.+.++++++|++|+
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~-------~g~~~Leeaia~~~g~~~vv~t~~Gt~Al 81 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGS-------KSFYDLEDAVQDLFGFKHIIPTHQGRGAE 81 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCC-------CCHHHHHHHHHHHHCCCeEEEcCCHHHHH
Confidence 35556666444 33444433 467777777776422233333 33469999999999999999999999999
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhccc-ccc-----
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---------------NDMDSLRNTLERVTAD-NKR----- 241 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~---------------~d~~~Le~~l~~~~~~-~~~----- 241 (442)
..++.++++|||+| ++.+.+.++...+.+.|++++.++. -|+++|++.+.+.... .+.
T Consensus 82 ~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~ 160 (431)
T cd00617 82 NILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTI 160 (431)
T ss_pred HHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEEC
Confidence 99999999999988 5666666777788899998876643 2678888888754111 110
Q ss_pred -----------------------cccccccccCCCcc----------ccccCCCCC--------ceeEEEEeccccccC-
Q 013461 242 -----------------------SNSFGVLGRSGRGL----------TEHCGVPVD--------KIDIVTAAMGHALAT- 279 (442)
Q Consensus 242 -----------------------a~~~g~~G~~g~g~----------~~~~~v~~~--------~~diii~S~sK~lg~- 279 (442)
.|++-++-+.-+.. ..+.+..+. -.|..+.|+.|..+.
T Consensus 161 p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~ 240 (431)
T cd00617 161 TNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN 240 (431)
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc
Confidence 12221211100000 001111111 135556666665543
Q ss_pred CCcEEEcCH-HhHHHHHhhC---CceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCC
Q 013461 280 EGGFCTGSA-RVVDHQRLSS---SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNP 355 (442)
Q Consensus 280 ~GG~v~g~~-~~i~~l~~~~---~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~ 355 (442)
.|||+++++ ++++.++... .++...+++++...++...+|+...+ .+..++..+++++|.+.|.+. |+++..+.
T Consensus 241 ~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l~~~~~~r~~l~~~L~~~-G~~v~~P~ 318 (431)
T cd00617 241 IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-EDYLRHRVEQVRYLGDRLDEA-GVPIVEPA 318 (431)
T ss_pred cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHC-CCCccCCC
Confidence 488999986 5888877432 22222344555555544335543212 233444444669999999987 99988777
Q ss_pred CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccC------ccccc--CCCCCceEEEecC-CCCHHHHHHH
Q 013461 356 ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR------SMLDK--CRLPVGIRLFVSA-AHSEADLVKA 426 (442)
Q Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~------~~~~~--~~~~~~iRi~~~~-~~t~eei~~~ 426 (442)
++.++++.++.-.+..+.+....++++.+++++.||.+.-... +..+. ....+.+|+.++. ..|.+++|.+
T Consensus 319 Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~ 398 (431)
T cd00617 319 GGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYV 398 (431)
T ss_pred cceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHH
Confidence 7888888865311111111123567887788888999764221 11100 1113569999986 7899999999
Q ss_pred HHHHHHHHHH
Q 013461 427 CESLKRISAV 436 (442)
Q Consensus 427 i~~l~~~~~~ 436 (442)
+++|..+.++
T Consensus 399 ~~~~~~~~~~ 408 (431)
T cd00617 399 AAAVIALYER 408 (431)
T ss_pred HHHHHHHHhh
Confidence 9999987754
No 216
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.77 E-value=3e-16 Score=154.57 Aligned_cols=294 Identities=15% Similarity=0.198 Sum_probs=187.5
Q ss_pred eeEEEeecC-CCCCCC-CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhh
Q 013461 109 KEVVNFASA-NYLGLI-GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAI 186 (442)
Q Consensus 109 ~~~id~~s~-~~l~~~-~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai 186 (442)
+.+||-++. -.+|-. .++++++++.++++.| .+..+...++++.+|+++|.++++++++|++|+..++
T Consensus 8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~~----------~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al 77 (363)
T TIGR01437 8 KKVINASGKMTILGVSTVSDEVADAQKRGAQNY----------FEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSV 77 (363)
T ss_pred ceEEECCcEeecCCCCCCCHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHH
Confidence 456775432 335544 4689999999998764 2356888999999999999999999999999999999
Q ss_pred hhhccCCC---------------EEEeCCCchHHH----HHHHHhcCCeEEEecC---CCHHHHHHHHHhhcccccc---
Q 013461 187 PCFCKKGD---------------LIVADEGVHWGI----QNGLYLSRSTVVYFKH---NDMDSLRNTLERVTADNKR--- 241 (442)
Q Consensus 187 ~a~~~~gd---------------~Vi~~~~~h~s~----~~~~~l~g~~v~~~~~---~d~~~Le~~l~~~~~~~~~--- 241 (442)
.+++++|| .|+++.+.+..+ ...+.+.|+++++++. .|++++++.+.+.++....
T Consensus 78 ~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~ 157 (363)
T TIGR01437 78 AAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKS 157 (363)
T ss_pred HHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEec
Confidence 99999998 788877544432 4667889999988763 3788888888654431100
Q ss_pred -------------------cccccccccCCCccccccCCC---CCceeEEEEecccccc-CCCcEEEcCHHhHHHHHhhC
Q 013461 242 -------------------SNSFGVLGRSGRGLTEHCGVP---VDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQRLSS 298 (442)
Q Consensus 242 -------------------a~~~g~~G~~g~g~~~~~~v~---~~~~diii~S~sK~lg-~~GG~v~g~~~~i~~l~~~~ 298 (442)
.|++-++-+...+ ..+. ..+.|+++.|++|+++ ..+|+++++++.++.++...
T Consensus 158 ~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~----~~~~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~~~i~~~~~~~ 233 (363)
T TIGR01437 158 HHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAE----EDLQKYYRLGADLVIYSGAKAIEGPTSGLVLGKKKYIEWVKLQS 233 (363)
T ss_pred CCCCcCCcCCHHHHHHHHHHcCCeEEEECCCC----CchHHHHHcCCCEEEEeCCcccCCCceEEEEEcHHHHHHHHhcc
Confidence 1222221111111 1111 1246999999999884 45899999988888765322
Q ss_pred Cc--eeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCC-----CEEEEEecCC-CC
Q 013461 299 SG--YVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPES-----PIVFLILEKS-TG 369 (442)
Q Consensus 299 ~~--~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~-----~i~~~~~~~~-~~ 369 (442)
.+ ..+.. .....++..++++.+.+ ..+..++..++.+++.+.|++++|+++...... +...+.+... .+
T Consensus 234 ~~~~~~~~~--~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g 311 (363)
T TIGR01437 234 KGIGRAMKV--GKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELG 311 (363)
T ss_pred CCCcceecc--CHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCC
Confidence 11 11111 11223344456666543 344566666778889999999889877532111 1122333211 01
Q ss_pred CchhhHHHHHHHHHHHHHhCC--EEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 370 SMKNDLQLLEDIADWALKEDG--VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 370 ~~~~~~~~~~~i~~~~L~~~G--V~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
....++++ .|+++| |.+++...+ ...+|+.+.. ++++|++.++++|+++
T Consensus 312 ------~~~~~l~~-~L~~~~~~I~~r~~~~~-------~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 312 ------MTAADVVQ-ALRQGEPAIYTRGYKAN-------EGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred ------CCHHHHHH-HHhcCCCCEEEeeeeec-------CCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 11235676 466556 666553221 2348998886 6799999999999875
No 217
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.77 E-value=4.7e-16 Score=155.32 Aligned_cols=302 Identities=13% Similarity=0.145 Sum_probs=189.1
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEEEEcchH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYSYGL 179 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i~~~sG~ 179 (442)
+.+++||+.++ ..+..++.+.+++.+.++....... .|+......++++.+|++++ .++++++++++
T Consensus 32 ~~~~~~l~~g~-p~~~~~~~v~~a~~~~~~~~~~~~~----~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~ 106 (394)
T PRK06836 32 ADNVFDFSLGN-PSVPPPAAVKEALRELAEEEDPGLH----GYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106 (394)
T ss_pred CCCeEEecCcC-CCCCCCHHHHHHHHHHHhcCCcCcc----cCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChH
Confidence 34679997765 3444567888888877765211111 23333445667777777663 34567777778
Q ss_pred HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccc-------cc-----
Q 013461 180 STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADN-------KR----- 241 (442)
Q Consensus 180 ~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~-------~~----- 241 (442)
+++..++.+++++||.|++++++|..+...++..|.++++++.+ |++++++.++..++.. +.
T Consensus 107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~ 186 (394)
T PRK06836 107 GALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYS 186 (394)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCC
Confidence 99999999999999999999999988888888889998887642 4667777664322110 00
Q ss_pred ------------c------ccccccccCCC-cccc---cc-C-CCCCceeEEEEeccccccCCC---cEEEcCHHhHHHH
Q 013461 242 ------------S------NSFGVLGRSGR-GLTE---HC-G-VPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQ 294 (442)
Q Consensus 242 ------------a------~~~g~~G~~g~-g~~~---~~-~-v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l 294 (442)
. |++-++-+.-. .+.. .. . ....+.+++++||||.+|.+| ||+++++++.+..
T Consensus 187 ~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~ 266 (394)
T PRK06836 187 EETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDAD 266 (394)
T ss_pred HHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhH
Confidence 1 34333322111 1100 00 0 011235799999999998766 9999998764431
Q ss_pred Hh------hCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC
Q 013461 295 RL------SSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST 368 (442)
Q Consensus 295 ~~------~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~ 368 (442)
+. ....... ...+++.+.++...+ ++ ...++.++++++.+.+.|++. |+.+..+..+.++|+.++..
T Consensus 267 ~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l---~~-~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~- 339 (394)
T PRK06836 267 DLVAALVFANRILGF-VNAPALMQRVVAKCL---DA-TVDVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLFPKSPEE- 339 (394)
T ss_pred HHHHHHHHHhhcccc-ccCCHHHHHHHHHHh---CC-hHHHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEEEeCCCC-
Confidence 11 1111011 123444444433333 22 234667888889999999886 77766544455666665321
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 369 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 369 ~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+ ..++++. |.++||.+.++..+.. +..+||+++ .+++++++++++|++++++.
T Consensus 340 -----~---~~~~~~~-l~~~gv~v~~g~~f~~-----~~~iRi~~~--~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 340 -----D---DVAFCEK-AKKHNLLLVPGSGFGC-----PGYFRLSYC--VDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred -----C---HHHHHHH-HHhCCEEEECchhcCC-----CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 1 2356654 5667999998765432 346999997 58999999999999988654
No 218
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.77 E-value=9.9e-17 Score=163.03 Aligned_cols=271 Identities=14% Similarity=0.119 Sum_probs=171.7
Q ss_pred HHHHHHHHhhhC----------CCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH-hcCCeEEEecCC--
Q 013461 157 LDCEARIAKFLG----------TPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKHN-- 223 (442)
Q Consensus 157 ~~le~~lA~~~g----------~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~-l~g~~v~~~~~~-- 223 (442)
.+|++.||++++ .+++++++++++++..++.+++++||.|+++.|+|..+...+. ..|++++.++..
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~ 168 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSS 168 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCc
Confidence 456666666653 2345666666789999999999999999999999998877777 478998887742
Q ss_pred -----CHHHHHHHHHhhc---cccc----------c-----------------cccccccccCCC-----------cccc
Q 013461 224 -----DMDSLRNTLERVT---ADNK----------R-----------------SNSFGVLGRSGR-----------GLTE 257 (442)
Q Consensus 224 -----d~~~Le~~l~~~~---~~~~----------~-----------------a~~~g~~G~~g~-----------g~~~ 257 (442)
|++++++.+++.. ...+ . .|++-++-+.-. ....
T Consensus 169 ~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~ 248 (468)
T PLN02450 169 NGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVME 248 (468)
T ss_pred cCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHH
Confidence 4577777765421 1111 0 222222211110 1011
Q ss_pred cc------CCCCCceeEEEEeccccccCCC---cEEEcCHH-hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh----
Q 013461 258 HC------GVPVDKIDIVTAAMGHALATEG---GFCTGSAR-VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE---- 323 (442)
Q Consensus 258 ~~------~v~~~~~diii~S~sK~lg~~G---G~v~g~~~-~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~---- 323 (442)
.. +.++.+..+++.||||.+|++| ||++++++ +++.+.... .+ +. .+.+...++.++|+.-.
T Consensus 249 ~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-~~--~~-~s~~~Q~a~~~~L~~~~~~~~ 324 (468)
T PLN02450 249 VLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-SF--GL-VSSQTQYLLSALLSDKKFTKN 324 (468)
T ss_pred HhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh-hc--CC-CCHHHHHHHHHHhCCchhHHH
Confidence 00 1112356799999999998777 99999754 556554332 22 22 24444555555553211
Q ss_pred cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc
Q 013461 324 ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK 403 (442)
Q Consensus 324 ~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~ 403 (442)
...+.+++++++++.+.+.|++. |+++..+..+.++|+.++..... .......++.++++++.||.+.|+..+...
T Consensus 325 ~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~~g~flwi~l~~~~~~--~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~- 400 (468)
T PLN02450 325 YLEENQKRLKQRQKKLVSGLEAA-GIKCLKSNAGLFCWVDMRHLLKS--NTFEAEMELWKKIVYEVKLNISPGSSCHCT- 400 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCceEEEEEEchHhcCc--CCchHHHHHHHHHHHhCCEEEeCccccCCC-
Confidence 12346788889999999999887 88766444555788877431110 000112356677777789999998765321
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 404 CRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 404 ~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
.+..+||+++. .+++++++++++|++++.+..
T Consensus 401 --~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 401 --EPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred --CCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 14569999986 468999999999999987665
No 219
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.77 E-value=4e-16 Score=152.44 Aligned_cols=277 Identities=13% Similarity=0.111 Sum_probs=173.7
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcch-HHHHHh
Q 013461 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYG-LSTMFS 184 (442)
Q Consensus 109 ~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG-~~a~~~ 184 (442)
.++|||++| |++|....+. . ...+.+|... ..+|++.||+++|.. +.|+.++| .+++..
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~-~---~~~~~~Yp~~-------------~~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~ 86 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPV-P---ADAWRRLPED-------------DDGLAACAARYYGAPDAAHVLPVAGSQAAIRA 86 (339)
T ss_pred hhhceeccCCCCCCCCCCCC-C---HHHHHhCCCc-------------hHHHHHHHHHHhCCCCcccEEECcCHHHHHHH
Confidence 468999887 7767652222 1 1345555321 168999999999963 34555555 577765
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCC------------------------HHHHHHHHHhhccccc
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND------------------------MDSLRNTLERVTADNK 240 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d------------------------~~~Le~~l~~~~~~~~ 240 (442)
+ ..++++|| |++..++|..+...++..|++++.++.++ .+.++++++.....
T Consensus 87 l-~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~-- 162 (339)
T PRK06959 87 L-PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAADTLPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAAR-- 162 (339)
T ss_pred H-HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccchhccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc--
Confidence 4 44578888 66788999999999999998887765322 22333332211110
Q ss_pred ccccccccccCCCccc---cccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHH
Q 013461 241 RSNSFGVLGRSGRGLT---EHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASA 314 (442)
Q Consensus 241 ~a~~~g~~G~~g~g~~---~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaa 314 (442)
+.+-+..+....+. ........+..|+++||||++|++| ||+++++++++.++.....+. .+.+...+
T Consensus 163 --~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~~----vs~~~q~a 236 (339)
T PRK06959 163 --GGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAWT----VSGPARHA 236 (339)
T ss_pred --CCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCCC----CcHHHHHH
Confidence 11111111111000 0011111233689999999999888 999999999999877644332 34556666
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEe
Q 013461 315 AITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 315 a~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
+.++|+.-+.....+++++++++++.+.|+++ |+++. +.+.++++.+. + ..++.+. |.++||.|+
T Consensus 237 ~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--------~---~~~l~~~-l~~~GI~vr 301 (339)
T PRK06959 237 VRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--------R---AAALHAA-LARRGIWTR 301 (339)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--------C---HHHHHHH-HHhCCeEEE
Confidence 66676533223457788999999999999987 77664 23445555542 1 2356665 556699997
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.... ++.+||+++. |++|+++++++|+++++.+
T Consensus 302 ~~~~--------~~~lRisi~~--~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 302 YFAP--------PPSVRFGLPA--DEAEWQRLEDALAECVPTL 334 (339)
T ss_pred ECCC--------CCeEEEECCC--CHHHHHHHHHHHHHHHHHH
Confidence 5421 3469999853 7789999999999877654
No 220
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=2.5e-16 Score=153.72 Aligned_cols=287 Identities=12% Similarity=0.080 Sum_probs=182.4
Q ss_pred ECCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-----CCcEEEEcchHH
Q 013461 106 ISGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-----TPDSILYSYGLS 180 (442)
Q Consensus 106 ~~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-----~e~~i~~~sG~~ 180 (442)
..|+++|||+.|.. .++.+|.+++++.+.+.. +. .+. |. .....+|++.+|++++ .+++++++++.+
T Consensus 16 ~~~~~~i~l~~~~~-~~~~p~~~~~~~~~~~~~-~~-~~~----Y~-~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~ 87 (335)
T PRK14808 16 TEKRDRTYLALNEN-PFPFPEDLVDEVFRRLNS-DT-LRI----YY-DSPDEELIEKILSYLDTDFLSKNNVSVGNGADE 87 (335)
T ss_pred CCCCceeEecCCCC-CCCCCHHHHHHHHHHhhh-hh-hhc----CC-CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHH
Confidence 36789999987752 556678999999887753 11 000 10 0125789999999987 245566666679
Q ss_pred HHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHH-HHHHHhh------cccccc------------
Q 013461 181 TMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSL-RNTLERV------TADNKR------------ 241 (442)
Q Consensus 181 a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~L-e~~l~~~------~~~~~~------------ 241 (442)
++..++.++ |.|+++.++|..+...++..|++++.++..+-..+ +..++.. .+.++.
T Consensus 88 ~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~l 163 (335)
T PRK14808 88 IIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERI 163 (335)
T ss_pred HHHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHccCCCEEEEeCCCCCCCCCcCHHHHHHH
Confidence 998888877 67888999999999999999999888864310000 0011110 000000
Q ss_pred -cccccccccC-CCccc--cccC-CCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHH
Q 013461 242 -SNSFGVLGRS-GRGLT--EHCG-VPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLAS 313 (442)
Q Consensus 242 -a~~~g~~G~~-g~g~~--~~~~-v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aa 313 (442)
.++.-++-+. ...+. .... +...+..++++||||++|++| ||+++++++++.+...... ++ .+++...
T Consensus 164 ~~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~--~~--~~~~~q~ 239 (335)
T PRK14808 164 LKTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP--FN--VSYVSQM 239 (335)
T ss_pred HhcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC--CC--CCHHHHH
Confidence 1222111110 00000 0000 111235789999999999888 9999999999998765422 22 2444445
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 013461 314 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 314 aa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v 393 (442)
++.++++..+...+..+.++++++++.+.|++. |+++.. ++++++++.++.. + ..++.+. |.++||+|
T Consensus 240 a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~g~f~~~~l~~~------~---~~~~~~~-l~~~Gi~V 307 (335)
T PRK14808 240 FAKVALDHREIFEERTKFIVEERERMKSALREM-GYRITD-SRGNFVFIFMEKE------E---KERLLEH-LRAKNIAV 307 (335)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC-CCCeEEEEeCCCc------c---HHHHHHH-HHHCCeEE
Confidence 556666543323445667777888899999886 787664 5788998887421 1 1356664 55679999
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
+.. +..+||++. +.++.++++++|+++
T Consensus 308 ~~~----------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 308 RSF----------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred EEC----------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 853 134999997 789999999998764
No 221
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.77 E-value=4.3e-16 Score=153.36 Aligned_cols=265 Identities=18% Similarity=0.220 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHhhhCCC----cEEEEcchHHHHHhhhhhhccCCCE-EEeCCCchHH-HHHHHHhcCCeEEEecCC----
Q 013461 154 DVHLDCEARIAKFLGTP----DSILYSYGLSTMFSAIPCFCKKGDL-IVADEGVHWG-IQNGLYLSRSTVVYFKHN---- 223 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e----~~i~~~sG~~a~~~ai~a~~~~gd~-Vi~~~~~h~s-~~~~~~l~g~~v~~~~~~---- 223 (442)
+...++++.+++++|.+ .++++++|++++..++.++.+++|. |+.+.++|+. +...++..|.+++.++.+
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~ 110 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEP 110 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCC
Confidence 77889999999999965 2446788999999999998888775 5566777665 445566778888777632
Q ss_pred -CHHHHHHHHHhhcccccc-----------------------cccccccccC--CCccccccCCCCCceeEEEEeccccc
Q 013461 224 -DMDSLRNTLERVTADNKR-----------------------SNSFGVLGRS--GRGLTEHCGVPVDKIDIVTAAMGHAL 277 (442)
Q Consensus 224 -d~~~Le~~l~~~~~~~~~-----------------------a~~~g~~G~~--g~g~~~~~~v~~~~~diii~S~sK~l 277 (442)
|++++++.+++.++.... .|+.-++-+. ..|. ..+.+...++|++++|++|++
T Consensus 111 ~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~-~~~~~~~~~~d~~~~s~~K~l 189 (355)
T TIGR03301 111 PDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA-IPIDIEELDVDALIASANKCL 189 (355)
T ss_pred CCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC-cccchhhcCccEEEecCCccc
Confidence 678888888653211000 2221111110 0111 112222336899999999998
Q ss_pred -cCCC-cEEEcCHHhHHHHHhhCCcee---------------ccCCCcHHHHHHHHHHHHHHhc---ChHHHHHHHHHHH
Q 013461 278 -ATEG-GFCTGSARVVDHQRLSSSGYV---------------FSASLPPYLASAAITAIDVLEE---NPDLITKLKKNTA 337 (442)
Q Consensus 278 -g~~G-G~v~g~~~~i~~l~~~~~~~~---------------~s~s~~p~~aaaa~aal~~l~~---~~~~~~~l~~~~~ 337 (442)
|+.| ||+++++++++.+.....++. ...+.++....++.++++.+.+ .++.+++++++++
T Consensus 190 ~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~ 269 (355)
T TIGR03301 190 EGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRE 269 (355)
T ss_pred ccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 5556 999999999988763211111 1113355555666677876643 3567788999999
Q ss_pred HHHHhhccCCCceeecCC--CCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEe
Q 013461 338 ILRTGLSDIHGLSIASNP--ESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 414 (442)
Q Consensus 338 ~l~~~L~~~~g~~~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~ 414 (442)
++.+.|.++ |+++..++ .++ ++++.++... + ....++.+. |.++||.+.++..+. .+.+||++
T Consensus 270 ~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~-l~~~gi~i~~~~~~~------~~~iRis~ 335 (355)
T TIGR03301 270 LLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDP-----D-FDFDDFYQE-LKERGFVIYPGKLTL------ADTFRIGT 335 (355)
T ss_pred HHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCC-----c-chHHHHHHH-HHHCCEEEECCcccc------ccEEEEec
Confidence 999999886 87754332 234 3455553210 0 112356765 556699998764321 14599999
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 013461 415 SAAHSEADLVKACESLKRI 433 (442)
Q Consensus 415 ~~~~t~eei~~~i~~l~~~ 433 (442)
+..+|++|+++++++|+++
T Consensus 336 ~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 336 IGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCCCCHHHHHHHHHHHHhh
Confidence 8889999999999999875
No 222
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.76 E-value=1.1e-15 Score=150.44 Aligned_cols=292 Identities=18% Similarity=0.170 Sum_probs=182.4
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSA 185 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~a 185 (442)
+.+++||+.+. ...+.+|.+.+++.+.+.... . |.... ..+|++++|++++. ++.++++++++++..+
T Consensus 18 ~~~~~~l~~~~-~~~~~p~~~~~a~~~~~~~~~-~-------Y~~~~-~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~ 87 (354)
T PRK06358 18 KNMILDFSANI-NPLGVPESLKQAITENLDKLV-E-------YPDPD-YLELRKRIASFEQLDLENVILGNGATELIFNI 87 (354)
T ss_pred ccceEEecCCC-CCCCCCHHHHHHHHHHHHhhh-c-------CCCcc-HHHHHHHHHHHhCCChhhEEECCCHHHHHHHH
Confidence 34579997753 223346889999888765421 1 11112 46899999999985 4556666666888888
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCC-----H-HHHHHHHHhhccc-------ccc-----------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-----M-DSLRNTLERVTAD-------NKR----------- 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d-----~-~~Le~~l~~~~~~-------~~~----------- 241 (442)
+.++ .+ |.|+++.++|..+...++..|++++.++.++ + +++.+.+....+. ++.
T Consensus 88 ~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~ 165 (354)
T PRK06358 88 VKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKK 165 (354)
T ss_pred HHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHH
Confidence 8876 44 5678899999998888888899988876431 2 2222222211110 000
Q ss_pred ------cccccccccC--------CCccccccCCCCCceeEEEEeccccccCCC---cEEEc-CHHhHHHHHhhCCceec
Q 013461 242 ------SNSFGVLGRS--------GRGLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTG-SARVVDHQRLSSSGYVF 303 (442)
Q Consensus 242 ------a~~~g~~G~~--------g~g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g-~~~~i~~l~~~~~~~~~ 303 (442)
.|++-++-+. +........++..+..|+++||||.+|++| ||+++ ++.+++.+......
T Consensus 166 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~--- 242 (354)
T PRK06358 166 ILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP--- 242 (354)
T ss_pred HHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC---
Confidence 1222111110 100000001222345799999999999777 99987 46788887654332
Q ss_pred cCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 304 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 304 s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
.+.+.+...++.++++.-+...+.++.++++++++.+.|++.+++++.. +.++++++.+++ ..++++
T Consensus 243 -~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~g~f~~~~~~~-----------~~~~~~ 309 (354)
T PRK06358 243 -WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYK-PSVNFIFFKLEK-----------PIDLRK 309 (354)
T ss_pred -CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC-CcceEEEEEcCc-----------hHHHHH
Confidence 2234455555555553211124467778888999999998876776654 467788877632 136777
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
.++ ++||.+.++..+.. ..+..+||++. ++++.++++++|++++
T Consensus 310 ~l~-~~gI~v~~~~~f~~---~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 310 ELL-KKGILIRSCSNYRG---LDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred HHH-HCCeEEEECCCCCC---CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 655 46999999866421 01345999997 8899999999998764
No 223
>PLN02231 alanine transaminase
Probab=99.76 E-value=8.8e-16 Score=157.71 Aligned_cols=304 Identities=13% Similarity=0.120 Sum_probs=185.4
Q ss_pred hHHHHHHHHHHHhc-CCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcchHHHHHhhhhhhc-cCCCE
Q 013461 126 EKLLESCTSALEKY-GVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSYGLSTMFSAIPCFC-KKGDL 195 (442)
Q Consensus 126 p~v~ea~~~~l~~~-g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~sG~~a~~~ai~a~~-~~gd~ 195 (442)
..+++++.+.+.+. |.... .|+......+|++.||+++ | .+++++++++++++..++.+++ .+||.
T Consensus 143 ~~~i~~a~~~l~~~~~~~~~----~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~ 218 (534)
T PLN02231 143 ADAIERAWQILDQIPGRATG----AYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDG 218 (534)
T ss_pred HHHHHHHHHHHHhcCCcccc----CcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCE
Confidence 46777777777653 22122 2333344456666666654 4 2456667777799999999997 58999
Q ss_pred EEeCCCchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhccc-------------ccc--------------
Q 013461 196 IVADEGVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTAD-------------NKR-------------- 241 (442)
Q Consensus 196 Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~-------------~~~-------------- 241 (442)
|+++.++|..+...+...|++++.++.+ |+++|++.++..... ++.
T Consensus 219 Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~ 298 (534)
T PLN02231 219 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVE 298 (534)
T ss_pred EEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHH
Confidence 9999999999999999999998887632 678888887653111 110
Q ss_pred ---cccccccccC---------CC---ccccc---cCCCCCc-eeEEEEeccccc-cCC---CcEEEc---CHHhHHHHH
Q 013461 242 ---SNSFGVLGRS---------GR---GLTEH---CGVPVDK-IDIVTAAMGHAL-ATE---GGFCTG---SARVVDHQR 295 (442)
Q Consensus 242 ---a~~~g~~G~~---------g~---g~~~~---~~v~~~~-~diii~S~sK~l-g~~---GG~v~g---~~~~i~~l~ 295 (442)
.|++-++-+. +. .+... .+....+ ..|+++||||++ |.+ +||+++ ++++++.+.
T Consensus 299 ~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~ 378 (534)
T PLN02231 299 FCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIY 378 (534)
T ss_pred HHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHH
Confidence 2222222111 00 00000 0111112 357889999986 544 499875 688888876
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHH-------H----HhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 013461 296 LSSSGYVFSASLPPYLASAAITAID-------V----LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 364 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~-------~----l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~ 364 (442)
..... .. ..+.....++..+++ . +++...+++.++++++.+.+.|++++|+.+..+.++.++|..+
T Consensus 379 k~~~~-~~--~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l 455 (534)
T PLN02231 379 KVASV-NL--CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRI 455 (534)
T ss_pred HHHhh-hc--CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccc
Confidence 54321 11 223333333334442 1 1122345788999999999999988888887554555556444
Q ss_pred cCCCCCchhhH----HHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 365 EKSTGSMKNDL----QLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 365 ~~~~~~~~~~~----~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
..+........ .....++..++++.||.+.|+..+....+ ...+|+++. .+++++++++++|+++++++++|
T Consensus 456 ~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g--~~~~Rit~~--~~~e~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 456 HLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPG--TWHFRCTIL--PQEDKIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred cCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCC--CCeEEEEeC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 32110000000 00123556677778999999887642111 134999985 58899999999999999998876
No 224
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.5e-16 Score=156.34 Aligned_cols=249 Identities=13% Similarity=0.156 Sum_probs=164.6
Q ss_pred HHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhccCC-CEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHH
Q 013461 157 LDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSL 228 (442)
Q Consensus 157 ~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~~~g-d~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~L 228 (442)
.++++.+|+++|.+ ++++++++++++..++.+++++| |.|++..++|..+...++..|++++.++.+ |++++
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l 139 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAI 139 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHH
Confidence 68999999999953 56666666799999999999997 899999999999888889999998887643 45666
Q ss_pred HHHHHhhcc-------cccc---------------cc--cccccccCCCcc------ccccCCCCCceeEEEEecccccc
Q 013461 229 RNTLERVTA-------DNKR---------------SN--SFGVLGRSGRGL------TEHCGVPVDKIDIVTAAMGHALA 278 (442)
Q Consensus 229 e~~l~~~~~-------~~~~---------------a~--~~g~~G~~g~g~------~~~~~v~~~~~diii~S~sK~lg 278 (442)
++.+.. ++ .++. ++ .+-+..+....+ .... ...+..|++.||||++|
T Consensus 140 ~~~~~~-~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~--~~~~n~iv~rSfSK~~g 216 (351)
T PRK01688 140 ADNLDG-VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWL--AEYPHLVILRTLSKAFA 216 (351)
T ss_pred HHhccC-CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHH--hhCCCEEEEecchHhhc
Confidence 555421 11 0000 11 111111110000 0001 11234689999999999
Q ss_pred CCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCCCceeec
Q 013461 279 TEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSIAS 353 (442)
Q Consensus 279 ~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~ 353 (442)
++| ||+++++++++.++....++. .+.+.++++.++|+.. +...+.++.++++++++.+.|.+++++....
T Consensus 217 laGlRiGy~i~~~~~i~~l~~~~~~~~----v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 292 (351)
T PRK01688 217 LAGLRCGFTLANEEVINLLLKVIAPYP----LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVF 292 (351)
T ss_pred CHHHHHhHHhCCHHHHHHHHhccCCCC----CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEC
Confidence 877 999999999998876544432 2334444555565421 2223456777788899999998876765333
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 354 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 354 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
++.++++++.+.+ ..++.+.++ ++||.++....+. ..+..+||++. +++|+++++++|+
T Consensus 293 ps~~nfi~~~~~~-----------~~~l~~~L~-~~gi~vr~~~~~~----~~~~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 293 DSETNYILARFTA-----------SSAVFKSLW-DQGIILRDQNKQP----GLSNCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred CCCCcEEEEEcCC-----------HHHHHHHHH-HCCeEEEECCCcC----CCCCeEEEeCC---CHHHHHHHHHhhC
Confidence 5678888877631 235777655 5699998754321 12356999997 7899999998873
No 225
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.76 E-value=3.3e-16 Score=157.21 Aligned_cols=300 Identities=14% Similarity=0.117 Sum_probs=179.9
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCC--CCCccCccccCcHHHHHHHHHHHhhh----C----CCcEEEEcc
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGV--GSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDSILYSY 177 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~--~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~i~~~s 177 (442)
|.+++||+.++ ..+..+|.+.+++.+++++... ...+ |+......+|++.+|+++ | .++++++++
T Consensus 33 ~~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G 107 (409)
T PRK07590 33 EAKIIRLGIGD-VTQPLPPAVIEAMHKAVDEMGTAETFRG----YGPEQGYDFLREKIAENDYQARGCDISADEIFISDG 107 (409)
T ss_pred CCceEEecCcC-CCCCCCHHHHHHHHHHHhcccccCCccC----CCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCC
Confidence 55789998776 3455678899999998876321 1111 222222356667777654 3 234455555
Q ss_pred hHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCe-----------EEEecCC---C-------------------
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRST-----------VVYFKHN---D------------------- 224 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~-----------v~~~~~~---d------------------- 224 (442)
+.+++..+ ..++++||.|++++|+|..+...++..|.+ ++.++.+ +
T Consensus 108 a~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~ 186 (409)
T PRK07590 108 AKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPN 186 (409)
T ss_pred HHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcccCceEEEEeCCC
Confidence 56777764 456689999999999999988888888875 6665532 1
Q ss_pred --------HHHHHHHHHhhcccccccccccccccC--------CCccccccCCCC-CceeEEEEeccccccCCC---cEE
Q 013461 225 --------MDSLRNTLERVTADNKRSNSFGVLGRS--------GRGLTEHCGVPV-DKIDIVTAAMGHALATEG---GFC 284 (442)
Q Consensus 225 --------~~~Le~~l~~~~~~~~~a~~~g~~G~~--------g~g~~~~~~v~~-~~~diii~S~sK~lg~~G---G~v 284 (442)
.+.++++++-.. .|++-++-+. +.-......++. .+..|+++||||++|++| ||+
T Consensus 187 NPTG~~~s~~~~~~l~~~a~-----~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~ 261 (409)
T PRK07590 187 NPTGTVLTKEQLKAWVDYAK-----ENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYT 261 (409)
T ss_pred CCcCCcCCHHHHHHHHHHHH-----HcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEE
Confidence 111111111100 1222221111 100000111211 235688999999998777 999
Q ss_pred EcCHHhHHHH-----------HhhCCceeccCCCcHHHHHHHHHHHHH--HhcChHHHHHHHHHHHHHHHhhccCCCcee
Q 013461 285 TGSARVVDHQ-----------RLSSSGYVFSASLPPYLASAAITAIDV--LEENPDLITKLKKNTAILRTGLSDIHGLSI 351 (442)
Q Consensus 285 ~g~~~~i~~l-----------~~~~~~~~~s~s~~p~~aaaa~aal~~--l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 351 (442)
++++++++.+ ........+. +.+.+.+.++.++++. .+...++++.++++++++.+.|++. |+.+
T Consensus 262 i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~ 339 (409)
T PRK07590 262 VVPKELKGKTSDGEGVSLNSLWNRRQSTKFN-GVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEV 339 (409)
T ss_pred EcCHHHhhhccccchhhhHHHHHHHHhhccc-CcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCce
Confidence 9999988721 1111111121 2344444445455531 1122346778888999999999886 7776
Q ss_pred ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 352 ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 352 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
..+..+.++|+.++... + ..++++.+++++||.+.++..+... . ...+||++. .+++++++++++|+
T Consensus 340 ~~~~g~~f~wi~~~~~~-----~---~~~~~~~l~~~~gv~v~pg~~f~~~-~--~~~iRi~~~--~~~~~l~~~l~rl~ 406 (409)
T PRK07590 340 YGGVNAPYIWVKTPDGM-----S---SWDFFDKLLQEANVVGTPGSGFGPS-G--EGYFRLSAF--GSRENVLEAMERIK 406 (409)
T ss_pred ecCCcceEEEEECCCCC-----C---HHHHHHHHHHHCCEEEeChhHhCCC-C--CCEEEEEcc--CCHHHHHHHHHHHH
Confidence 64456778888875321 1 2356766677779999988654321 1 246999963 47899999999998
Q ss_pred HH
Q 013461 432 RI 433 (442)
Q Consensus 432 ~~ 433 (442)
++
T Consensus 407 ~~ 408 (409)
T PRK07590 407 KA 408 (409)
T ss_pred hh
Confidence 65
No 226
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.75 E-value=2.6e-16 Score=157.70 Aligned_cols=297 Identities=13% Similarity=0.090 Sum_probs=178.6
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEE--EEcc
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSI--LYSY 177 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i--~~~s 177 (442)
+++.|||+.+.+..+.+++.+.+++.+++++.-.. +....|+......+|++.+|+++. .++++ .+.+
T Consensus 28 ~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G 105 (404)
T PTZ00376 28 SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEK--NLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS 105 (404)
T ss_pred CcccEecccceeECCCCCEehhhHHHHHHHHhccc--cCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence 34779998776544444555566666665331100 001123333444677777777652 12333 2556
Q ss_pred hHHHHHhhh---hhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhcccccc------
Q 013461 178 GLSTMFSAI---PCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N----DMDSLRNTLERVTADNKR------ 241 (442)
Q Consensus 178 G~~a~~~ai---~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~---~----d~~~Le~~l~~~~~~~~~------ 241 (442)
|++++..++ .+++++||.|++++++|+.+...++..|++++.++. + |.+.+++.+++..+....
T Consensus 106 ~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p 185 (404)
T PTZ00376 106 GTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACA 185 (404)
T ss_pred cchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCC
Confidence 667776655 467899999999999999999999999999998875 2 577888877643221111
Q ss_pred ---------------------cccccccccCCC-ccc-c-----c---cCCC-CCceeEEEEeccccccCCC---cEE--
Q 013461 242 ---------------------SNSFGVLGRSGR-GLT-E-----H---CGVP-VDKIDIVTAAMGHALATEG---GFC-- 284 (442)
Q Consensus 242 ---------------------a~~~g~~G~~g~-g~~-~-----~---~~v~-~~~~diii~S~sK~lg~~G---G~v-- 284 (442)
.|++-++-+.-. .+. + + .... ..+..|+++||||++|++| ||+
T Consensus 186 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~ 265 (404)
T PTZ00376 186 HNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHI 265 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEE
Confidence 333333221110 000 0 0 0001 1124699999999999776 997
Q ss_pred -EcCHHhHHHHHhhC---CceeccCCCcHHHHHHHHHHHHHH-------hcChHHHHHHHHHHHHHHHhhccCCC----c
Q 013461 285 -TGSARVVDHQRLSS---SGYVFSASLPPYLASAAITAIDVL-------EENPDLITKLKKNTAILRTGLSDIHG----L 349 (442)
Q Consensus 285 -~g~~~~i~~l~~~~---~~~~~s~s~~p~~aaaa~aal~~l-------~~~~~~~~~l~~~~~~l~~~L~~~~g----~ 349 (442)
++++++++.+.... ....++ +.+++.+.++.++++.- +...+.+++++++++.+.+.|++. + +
T Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~ 343 (404)
T PTZ00376 266 VCANKEEAANVLSQLKLIIRPMYS-SPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL-GSPGDW 343 (404)
T ss_pred EeCCHHHHHHHHHHHHHHHhhhcC-CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcc
Confidence 68887655442211 111122 23445555555555321 112335567889999999999876 3 3
Q ss_pred eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHH
Q 013461 350 SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACES 429 (442)
Q Consensus 350 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~ 429 (442)
.+..+..+.++|+.+. .++++++++++||++.|+ + |++++. .+.+++++++++
T Consensus 344 ~~~~p~gg~f~~~~~~-------------~~~~~~L~~~~~v~v~p~------------~-Ris~~~-~~~~~~~~~~~~ 396 (404)
T PTZ00376 344 EHIINQIGMFSFTGLT-------------KEQVERLIEKYHIYLLDN------------G-RISVAG-LTSKNVDYVAEA 396 (404)
T ss_pred cccccCceEEEecCCC-------------HHHHHHHHHhCCEeecCC------------C-eEEEec-cCHHhHHHHHHH
Confidence 3333334444554441 156777777779988653 2 999965 689999999999
Q ss_pred HHHHHH
Q 013461 430 LKRISA 435 (442)
Q Consensus 430 l~~~~~ 435 (442)
|++++.
T Consensus 397 l~~~~~ 402 (404)
T PTZ00376 397 IHDVVR 402 (404)
T ss_pred HHHHHh
Confidence 998864
No 227
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.75 E-value=6.1e-16 Score=153.61 Aligned_cols=298 Identities=17% Similarity=0.172 Sum_probs=185.3
Q ss_pred CChHHHHHHHHHHHhcCC--CCCccCccccCcHHHHHHHHHHHhhhCCC---cEEEEcchHHHHHhhhhhhccCCCEEEe
Q 013461 124 GHEKLLESCTSALEKYGV--GSCGPRGFYGTIDVHLDCEARIAKFLGTP---DSILYSYGLSTMFSAIPCFCKKGDLIVA 198 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~g~--~~~~~~~~~g~~~~~~~le~~lA~~~g~e---~~i~~~sG~~a~~~ai~a~~~~gd~Vi~ 198 (442)
.++.+.+++.+.+++++. +.+.++...+..+...++++.+++++|.+ ++++++++++++..++.+++++||.|++
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~ 91 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVIT 91 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEE
Confidence 457899999999988642 22222222233477889999999999964 4566678889999999999999999999
Q ss_pred CCCchHHHHHH----HHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc-------------------cccccc--c
Q 013461 199 DEGVHWGIQNG----LYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR-------------------SNSFGV--L 248 (442)
Q Consensus 199 ~~~~h~s~~~~----~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~-------------------a~~~g~--~ 248 (442)
+...|.++... .+..|.+++.++.+ |++++++.+++.+.-... ++..|+ +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~li 171 (376)
T TIGR01977 92 TPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFI 171 (376)
T ss_pred CcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEE
Confidence 99999886543 33458888877642 677777776432211000 111111 1
Q ss_pred --ccCCCccccccCCCCCceeEEEEeccccccC-CC-cEE-EcCHHhHHHHHhhCCce-------------ecc-CCCcH
Q 013461 249 --GRSGRGLTEHCGVPVDKIDIVTAAMGHALAT-EG-GFC-TGSARVVDHQRLSSSGY-------------VFS-ASLPP 309 (442)
Q Consensus 249 --G~~g~g~~~~~~v~~~~~diii~S~sK~lg~-~G-G~v-~g~~~~i~~l~~~~~~~-------------~~s-~s~~p 309 (442)
+.++.|.. .+++...++|+++.|++|.++. .| |++ +.++..+..+....... .|. ++.+.
T Consensus 172 vD~a~~~g~~-~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~ 250 (376)
T TIGR01977 172 LDAAQTAGVI-PIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNT 250 (376)
T ss_pred EEhhhccCcc-CCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCH
Confidence 11111221 1233335689999999999864 23 444 44443222211110000 011 22344
Q ss_pred HHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecC----CCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 310 YLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN----PESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 310 ~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
...++..++++.+.+. +.++++.+++.+++.+.|.+.+++++..+ ...+++.+.+... + ..++.+
T Consensus 251 ~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~---~~~~~~ 321 (376)
T TIGR01977 251 PGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI------D---SEEVAD 321 (376)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC------C---HHHHHH
Confidence 4455556788877643 45788889999999999988778877643 1357777777321 1 235666
Q ss_pred HHHHhC-CEEEeeccCcccc-----cCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 384 WALKED-GVFVVTSKRSMLD-----KCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 384 ~~L~~~-GV~v~~~~~~~~~-----~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
. |.++ ||.+..+..+... ....+..+|++++..+|++|+++++++|++
T Consensus 322 ~-L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 322 I-LDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred H-HhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 4 5444 9999876432210 000124599999999999999999999975
No 228
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.75 E-value=2.8e-16 Score=154.54 Aligned_cols=269 Identities=18% Similarity=0.263 Sum_probs=174.7
Q ss_pred CcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh-ccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------C
Q 013461 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------D 224 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~-~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d 224 (442)
..+...++|+.+++++|.++++++++|++|+..++.++ .++||.|+++.+.|.++...+...|.+++.++.+ |
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 95 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNID 95 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcC
Confidence 34567899999999999999999999999999999988 5899999999999999999999899998887643 5
Q ss_pred HHHHHHHHHhhccccccccccc------------------cccc--CCCccccccCCCC-CceeEEEEecc--ccccC-C
Q 013461 225 MDSLRNTLERVTADNKRSNSFG------------------VLGR--SGRGLTEHCGVPV-DKIDIVTAAMG--HALAT-E 280 (442)
Q Consensus 225 ~~~Le~~l~~~~~~~~~a~~~g------------------~~G~--~g~g~~~~~~v~~-~~~diii~S~s--K~lg~-~ 280 (442)
++++++.++..+......|-+| ++-+ +..|.. ..+... ...|+.+.|++ |.++. .
T Consensus 96 ~~~l~~~i~~~~~~v~~~~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~~~~~~ 174 (352)
T cd00616 96 PELIEAAITPRTKAIIPVHLYGNPADMDAIMAIAKRHGLPVIEDAAQALGAT-YKGRKVGTFGDAGAFSFHPTKNLTTGE 174 (352)
T ss_pred HHHHHHhcCcCCeEEEEECCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCe-ECCEEcccCcceeEEcCCCCCCCcccC
Confidence 6777776643211100011111 1111 011110 001000 11367777876 99953 5
Q ss_pred CcEEEcC-HHhHHHHHhh---CCc----------eeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC
Q 013461 281 GGFCTGS-ARVVDHQRLS---SSG----------YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI 346 (442)
Q Consensus 281 GG~v~g~-~~~i~~l~~~---~~~----------~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~ 346 (442)
||+++.+ +++.+.++.. +.. ..++..++++.++.+...++.+ ++..++.+++.+++++.|.++
T Consensus 175 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~---~~~~~~~~~~~~~~~~~L~~~ 251 (352)
T cd00616 175 GGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL---DEIIARRREIAERYKELLADL 251 (352)
T ss_pred ceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHhcCC
Confidence 6777665 5776655432 110 1123446777777766655544 456778889999999999988
Q ss_pred CCceeecCCC-----CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccC-----------CCC---
Q 013461 347 HGLSIASNPE-----SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKC-----------RLP--- 407 (442)
Q Consensus 347 ~g~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~-----------~~~--- 407 (442)
+|+++..++. .+++.+.+....+ ....++.+. |+++||.+.....+..... ..|
T Consensus 252 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 324 (352)
T cd00616 252 PGIRLPDVPPGVKHSYHLYVIRLDPEAG------ESRDELIEA-LKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAE 324 (352)
T ss_pred CCccCCCCCCCCceeeEEEEEEECCcCC------CCHHHHHHH-HHHCCCCeeeecCccccCHhhhhccCCCcCCChHHH
Confidence 8887764322 2466666642101 012356664 6667998776554432111 112
Q ss_pred ----CceEEEecCCCCHHHHHHHHHHHH
Q 013461 408 ----VGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 408 ----~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
..+|++++..+|++||++++++|+
T Consensus 325 ~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 325 DLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 359999999999999999999874
No 229
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.75 E-value=1.2e-16 Score=157.87 Aligned_cols=207 Identities=14% Similarity=0.139 Sum_probs=147.0
Q ss_pred CcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEecCCCHHH
Q 013461 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDS 227 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~~~d~~~ 227 (442)
..+.+.+||+++|+++|.+.++++++|++|+..++.+++++||.|+++.+.|.+.... +...|.++.+++++|+++
T Consensus 38 ~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 117 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEA 117 (369)
T ss_pred CChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 5688999999999999999999999999999999999999999999999888876543 446788999999999999
Q ss_pred HHHHHHhhcccccc-------------------c--ccccccccC--CCccccccCCCCCceeEEEEeccccccC----C
Q 013461 228 LRNTLERVTADNKR-------------------S--NSFGVLGRS--GRGLTEHCGVPVDKIDIVTAAMGHALAT----E 280 (442)
Q Consensus 228 Le~~l~~~~~~~~~-------------------a--~~~g~~G~~--g~g~~~~~~v~~~~~diii~S~sK~lg~----~ 280 (442)
+++.+++.++-... + |++-++-+. +.+.. ...+ ..+.|+++.|++|.+|. .
T Consensus 118 l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-~~~~-~~g~Divv~S~tK~l~g~~~~~ 195 (369)
T cd00614 118 LEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-QRPL-ELGADIVVHSATKYIGGHSDVI 195 (369)
T ss_pred HHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-CChh-hhCCcEEEeccceeccCCCCce
Confidence 98887642211100 2 222222111 11111 0111 13579999999999974 3
Q ss_pred CcEEEcCH-HhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec------
Q 013461 281 GGFCTGSA-RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS------ 353 (442)
Q Consensus 281 GG~v~g~~-~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~------ 353 (442)
||++++++ ++++.++.... .+++.++|..+++++.+++. .+.++++..++.+++.+.|++.+++..+.
T Consensus 196 gG~v~~~~~~l~~~l~~~~~--~~g~~~~p~~a~~~l~~l~t---l~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~ 270 (369)
T cd00614 196 AGVVVGSGEALIQRLRFLRL--ALGTILSPFDAWLLLRGLKT---LPLRMERHSENALKVAEFLEKHPKVERVYYPGLPS 270 (369)
T ss_pred EEEEEeCcHHHHHHHHHHHH--hhCCCCCHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCC
Confidence 69999987 88888775432 24566788887776555543 34577888899999999998875543111
Q ss_pred -----------CCCCCEEEEEec
Q 013461 354 -----------NPESPIVFLILE 365 (442)
Q Consensus 354 -----------~~~~~i~~~~~~ 365 (442)
...++++.+.++
T Consensus 271 ~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 271 HPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred CchHHHHHHhcCCCceEEEEEeC
Confidence 124778888884
No 230
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.75 E-value=9e-16 Score=153.93 Aligned_cols=301 Identities=16% Similarity=0.113 Sum_probs=183.0
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCcc--ccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHh
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGF--YGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~--~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ 184 (442)
++++.|.++. .|.. ++.+.+++.+.++.++.+..+.... .+......++++ + +++|.+ ++++++++++++..
T Consensus 26 ~~~iyld~~a-~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~ 101 (406)
T TIGR01814 26 NAVIYLDGNS-LGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHL 101 (406)
T ss_pred CCcEEecCCC-cCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHH
Confidence 3455565544 5654 7889999999988876543322111 222345555555 4 888854 56777777888888
Q ss_pred hhhhhccCC---CEEEeCCCchHHHHHH----HHhcCCeE----EEecC-C----CHHHHHHHHHhhcccccc-------
Q 013461 185 AIPCFCKKG---DLIVADEGVHWGIQNG----LYLSRSTV----VYFKH-N----DMDSLRNTLERVTADNKR------- 241 (442)
Q Consensus 185 ai~a~~~~g---d~Vi~~~~~h~s~~~~----~~l~g~~v----~~~~~-~----d~~~Le~~l~~~~~~~~~------- 241 (442)
++.++.+++ ++|+++...|++.... ++..|.++ +.++. + |++++++.++..+++++.
T Consensus 102 ~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~ 181 (406)
T TIGR01814 102 LLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQ 181 (406)
T ss_pred HHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccc
Confidence 888876554 3788999999885443 34557765 34432 1 678888888654333221
Q ss_pred ---------------cccccc--c--ccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHHhHHHHHhhCCc-
Q 013461 242 ---------------SNSFGV--L--GRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARVVDHQRLSSSG- 300 (442)
Q Consensus 242 ---------------a~~~g~--~--G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~~i~~l~~~~~~- 300 (442)
+|..|+ + +.++.|... +++...++|++++|.+|.+ |.+||+++..++..+.+.....+
T Consensus 182 ~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~-id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~~~~~~~p~~~g~ 260 (406)
T TIGR01814 182 YYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP-LDLHDWGVDFACWCTYKYLNAGPGAGAFVHEKHAHTERPRLAGW 260 (406)
T ss_pred cccceecCHHHHHHHHHHcCCEEEEEcccccCCcc-cccccCCCCEEEEcCccccCCCCCeEEEEehhhhhhcCCCCCcc
Confidence 222221 1 122223222 3444457899999999998 34465554433333323221001
Q ss_pred ------e-------------ec-cCCCcHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccC----CCceeecC
Q 013461 301 ------Y-------------VF-SASLPPYLASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDI----HGLSIASN 354 (442)
Q Consensus 301 ------~-------------~~-s~s~~p~~aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~----~g~~~~~~ 354 (442)
+ .| .++.+...+++..++++.+++. +...++.+++.+++++.|.++ +++++.++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~ 340 (406)
T TIGR01814 261 WGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITP 340 (406)
T ss_pred cCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCC
Confidence 0 01 1223444556666789988643 567788999999999988764 34776653
Q ss_pred C----CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEe-cCCCCHHHHHHHHHH
Q 013461 355 P----ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV-SAAHSEADLVKACES 429 (442)
Q Consensus 355 ~----~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~-~~~~t~eei~~~i~~ 429 (442)
. .++++.+.++. + ..++.+. |.++||.+.... +..||+|+ +..+|++||++++++
T Consensus 341 ~~~~~r~~~v~~~~~~-------~---~~~~~~~-L~~~gi~v~~~~---------~~~iRiS~~~~~nt~~did~l~~~ 400 (406)
T TIGR01814 341 RDHAQRGCQLSLTHPV-------P---GKAVFQA-LIKRGVIGDKRE---------PSVIRVAPVPLYNTFVDVYDAVNV 400 (406)
T ss_pred CChhhcCCeEEEEecC-------C---HHHHHHH-HHHCCEEEeccC---------CCeEEEechhccCCHHHHHHHHHH
Confidence 2 24577776631 1 2356665 556799875321 23599999 688999999999999
Q ss_pred HHHHH
Q 013461 430 LKRIS 434 (442)
Q Consensus 430 l~~~~ 434 (442)
|++++
T Consensus 401 l~~~~ 405 (406)
T TIGR01814 401 LEEIL 405 (406)
T ss_pred HHHHh
Confidence 98764
No 231
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.75 E-value=3e-16 Score=160.22 Aligned_cols=271 Identities=11% Similarity=0.117 Sum_probs=167.3
Q ss_pred HHHHHHHHHhhhC----------CCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH-hcCCeEEEecCC-
Q 013461 156 HLDCEARIAKFLG----------TPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKHN- 223 (442)
Q Consensus 156 ~~~le~~lA~~~g----------~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~-l~g~~v~~~~~~- 223 (442)
..+|++.||++++ .+++++++++++++..++.++++|||.|+++.|+|+.+...+. ..|++++.++..
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~ 175 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSS 175 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCC
Confidence 3556666666553 2355666666799999999999999999999999999888777 479998888752
Q ss_pred ------CHHHHHHHHHhhc---ccccc---------------------------cccccccccCCC-----------ccc
Q 013461 224 ------DMDSLRNTLERVT---ADNKR---------------------------SNSFGVLGRSGR-----------GLT 256 (442)
Q Consensus 224 ------d~~~Le~~l~~~~---~~~~~---------------------------a~~~g~~G~~g~-----------g~~ 256 (442)
|++++++.++... ...+. .|++-++-+.-. .+.
T Consensus 176 ~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~ 255 (496)
T PLN02376 176 SDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVA 255 (496)
T ss_pred CccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHH
Confidence 4677766543321 11111 233222211100 111
Q ss_pred ccc-CCCC----CceeEEEEeccccccCCC---cEEEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH---hc
Q 013461 257 EHC-GVPV----DKIDIVTAAMGHALATEG---GFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL---EE 324 (442)
Q Consensus 257 ~~~-~v~~----~~~diii~S~sK~lg~~G---G~v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l---~~ 324 (442)
+.. ..+. .++.+++.||||.+|++| ||++++ +.+.+.++... . ++ ..+.+.+.++.+.++.- ++
T Consensus 256 ~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~-~--~~-~vs~~~Q~a~~~~L~d~~~~~~ 331 (496)
T PLN02376 256 EVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS-S--FG-LVSSQTQLMLASMLSDDQFVDN 331 (496)
T ss_pred HhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh-h--cC-CCCHHHHHHHHHHhCChhHHHH
Confidence 110 0010 123466899999998777 999984 55666554332 2 12 12444444444444311 11
Q ss_pred -ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc
Q 013461 325 -NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK 403 (442)
Q Consensus 325 -~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~ 403 (442)
..+.+++++++.+.+.+.|.+. |+++..+..+.++|+.++...... .......++++.++++.||.+.|+..+...
T Consensus 332 ~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~~~~~~~-~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~- 408 (496)
T PLN02376 332 FLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLRHLLRDR-NSFESEIELWHIIIDKVKLNVSPGSSFRCT- 408 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEchhhhccC-CchhHHHHHHHHHHHcCCEEEeCccccCCC-
Confidence 1234677888889999999875 777765555678888874321100 000112467777777779999998765321
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 404 CRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 404 ~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.++.+||+++. .+++++++++++|++++.+
T Consensus 409 --~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 409 --EPGWFRICFAN-MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred --CCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence 24579999985 4679999999999998864
No 232
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=3.2e-16 Score=146.77 Aligned_cols=292 Identities=20% Similarity=0.224 Sum_probs=191.8
Q ss_pred EEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhcc
Q 013461 112 VNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCK 191 (442)
Q Consensus 112 id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~ 191 (442)
+||.|-|+-| .+|++.|++.++-. .+ ...||..+...++|+++++.+|.+.++|+.+||.||+.+|.+.++
T Consensus 2 ~~f~SDn~~g--~~~~m~eam~~a~~---~~----~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~ 72 (342)
T COG2008 2 IDFRSDNVAG--PTPEMREALAAANA---VG----DDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ 72 (342)
T ss_pred CccccCccCC--CCHHHHHHHHhccc---cC----CCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC
Confidence 6788877665 47999999876632 12 246899999999999999999999999999999999999999999
Q ss_pred CCCEEEeCCCchHHHHHH--HH-hcCCeEE-EecC----CCHHHHHHHHHhhccc---ccc-------------------
Q 013461 192 KGDLIVADEGVHWGIQNG--LY-LSRSTVV-YFKH----NDMDSLRNTLERVTAD---NKR------------------- 241 (442)
Q Consensus 192 ~gd~Vi~~~~~h~s~~~~--~~-l~g~~v~-~~~~----~d~~~Le~~l~~~~~~---~~~------------------- 241 (442)
||+.|++.+..|.....+ +. +++...+ ..+- .++++++..++..+.. .+.
T Consensus 73 ~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el 152 (342)
T COG2008 73 PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDEL 152 (342)
T ss_pred CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHH
Confidence 999999999999876542 33 2333333 3331 2688888877652201 010
Q ss_pred --------cccccccccCCCcc---ccccCCC----CCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCceeccC
Q 013461 242 --------SNSFGVLGRSGRGL---TEHCGVP----VDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGYVFSA 305 (442)
Q Consensus 242 --------a~~~g~~G~~g~g~---~~~~~v~----~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~~~~s~ 305 (442)
.|++.+.= +|.-+ .-.+|++ ...+|.+..+++|.+|.++ ..++++.+.++.++.....+....
T Consensus 153 ~~i~~~~k~~~l~LHm-DGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~~Ggl~ 231 (342)
T COG2008 153 EAISAVCKEHGLPLHM-DGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKRAGGLM 231 (342)
T ss_pred HHHHHHHHHhCCceee-chHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHHhcccH
Confidence 22222211 11100 1112322 1347999999999998765 567899998877654322111111
Q ss_pred CCcHHHHHHHHHHHHHHhcChHHHHHHHHH--HHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 306 SLPPYLASAAITAIDVLEENPDLITKLKKN--TAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 306 s~~p~~aaaa~aal~~l~~~~~~~~~l~~~--~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
+-.-+.++++..+| +++-.+.....+| ..+|.+.|...+|+++..+++++++++.+++.. . ...+...
T Consensus 232 ~k~r~laA~~~~~l---~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~------i-~~l~~~~ 301 (342)
T COG2008 232 RKARFLAAQGLYAL---EDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA------I-EALRLAG 301 (342)
T ss_pred hhhhHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH------H-HHHHhhc
Confidence 22344555554444 3433455555555 899999999778999988889999999985310 0 0111111
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
.+...|+++.+.. ..+|+..+...|++|+++++..++++.
T Consensus 302 -~~~~~~~~~~~~~----------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 302 -ALFYRGVLIGAHG----------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -hhheeeeeccCCC----------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 2333455554432 128999999999999999999988763
No 233
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=1.1e-15 Score=150.82 Aligned_cols=256 Identities=14% Similarity=0.146 Sum_probs=165.1
Q ss_pred HHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhccCC-CEEEeCCCchHHHHHHHHhcCCeEEEecCC--------C
Q 013461 156 HLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHN--------D 224 (442)
Q Consensus 156 ~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~~~g-d~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~--------d 224 (442)
..+|++.+|+++|.+ ++++++++++++..++.+++++| |.|+++.++|..+....+..|.+++.++.. |
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 140 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD 140 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence 368999999999853 45555556799999999999999 799999999888877778889999888752 2
Q ss_pred HHHHHHHHHhhccc--------ccc---------------c-cccccc-ccCCCccccccC----CCCCceeEEEEeccc
Q 013461 225 MDSLRNTLERVTAD--------NKR---------------S-NSFGVL-GRSGRGLTEHCG----VPVDKIDIVTAAMGH 275 (442)
Q Consensus 225 ~~~Le~~l~~~~~~--------~~~---------------a-~~~g~~-G~~g~g~~~~~~----v~~~~~diii~S~sK 275 (442)
++++++.+.....+ ++. + ++.-++ .+....+..... ++..+..|+++||||
T Consensus 141 ~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK 220 (364)
T PRK04781 141 VPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSK 220 (364)
T ss_pred HHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChh
Confidence 33333222111110 000 1 111111 111000100000 111235789999999
Q ss_pred cccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCCCce
Q 013461 276 ALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLS 350 (442)
Q Consensus 276 ~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 350 (442)
++|++| ||+++++++++.++.....+ + .+.....++.++++.- +...+.+++++++++++.+.|++++++.
T Consensus 221 ~~gl~GlRvGy~v~~~~l~~~l~~~~~~~--~--~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 296 (364)
T PRK04781 221 AHALAAARIGSLIANAELIAVLRRCQAPY--P--VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVR 296 (364)
T ss_pred hcccccceeeeeeCCHHHHHHHHhccCCC--C--CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999777 99999999999987665433 2 2444444555555431 1122345677888899999998876764
Q ss_pred eecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 351 IASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 351 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
...++.+.++++.++. ..++.+. |.++||.|.++..+. ..+..+||++. +.+|+++++++|
T Consensus 297 ~~~p~~g~f~~~~~~~-----------~~~~~~~-l~~~gI~v~~~~~~~----~~~~~~Ris~~---~~~~~~~l~~al 357 (364)
T PRK04781 297 RVYPSQGNFLLVRFDD-----------AEAAFQA-LLAAGVVVRDQRAAP----RLSDALRITLG---TPEQNDRVLAAL 357 (364)
T ss_pred eECCCCCcEEEEEcCC-----------HHHHHHH-HHHCCeEEeeCCCCC----CCCCeEEEeCC---CHHHHHHHHHHH
Confidence 3335678888887731 1245654 556799999875321 12356999997 789999999999
Q ss_pred HHHH
Q 013461 431 KRIS 434 (442)
Q Consensus 431 ~~~~ 434 (442)
+++.
T Consensus 358 ~~~~ 361 (364)
T PRK04781 358 QRTQ 361 (364)
T ss_pred HHHH
Confidence 8764
No 234
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.74 E-value=1.2e-15 Score=152.77 Aligned_cols=311 Identities=14% Similarity=0.123 Sum_probs=186.5
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCCC-ccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKY-GVGSC-GPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSA 185 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~-g~~~~-~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~a 185 (442)
-|+|.++..+ .++.+.+++.+.++++ +.... .+...+...+..+++++.+++++|.+ +++++++|++++..+
T Consensus 5 ~yld~aa~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~ 80 (402)
T TIGR02006 5 IYLDYAATTP----VDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLA 80 (402)
T ss_pred EEeeCCcCCC----CCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHH
Confidence 4666654332 3689999998888653 32221 11111122456788999999999964 567777778898887
Q ss_pred hhhh----ccCCCEEEeCCCchHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhcccccc------------
Q 013461 186 IPCF----CKKGDLIVADEGVHWGIQNGL---YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR------------ 241 (442)
Q Consensus 186 i~a~----~~~gd~Vi~~~~~h~s~~~~~---~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~------------ 241 (442)
+.++ .++||.|+++...|.+..... +..|.+++.++.+ |++++++.+++.+.-...
T Consensus 81 l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~ 160 (402)
T TIGR02006 81 IKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQD 160 (402)
T ss_pred HHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceeccc
Confidence 7655 378999999999999876554 3458888887643 677777776543221100
Q ss_pred ---------ccccccc--ccCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCc----eec-c
Q 013461 242 ---------SNSFGVL--GRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSG----YVF-S 304 (442)
Q Consensus 242 ---------a~~~g~~--G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~----~~~-s 304 (442)
.++.-++ +..+.|.. ..++....+|+++.|.+|.+|..| |+++.+++..+.+.....+ ..+ .
T Consensus 161 ~~~I~~l~~~~g~~livD~a~a~g~~-~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (402)
T TIGR02006 161 IAAIGEICRERKVFFHVDAAQSVGKI-PINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGHERGMRS 239 (402)
T ss_pred HHHHHHHHHHcCCEEEEEcchhcCCc-ccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCceecCCCccCCccC
Confidence 1221111 11111211 123333457999999999888655 7776665433222111110 012 2
Q ss_pred CCCcHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHhhccCCCceeecCC--CCC-EEEEEecCCCCCchhhHHHHHH
Q 013461 305 ASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNP--ESP-IVFLILEKSTGSMKNDLQLLED 380 (442)
Q Consensus 305 ~s~~p~~aaaa~aal~~l~~~-~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~ 380 (442)
++.+.....+..++++.+++. +...++.+++.+++++.|++++++.+.++. ..| ++.+.+... + ...
T Consensus 240 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~------~---~~~ 310 (402)
T TIGR02006 240 GTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYV------E---GES 310 (402)
T ss_pred CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCc------C---HHH
Confidence 334455555555788877642 446678889999999999888777765432 222 323333211 1 113
Q ss_pred HHHHHHHhCCEEEeeccCccccc---------CCC-----CCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 381 IADWALKEDGVFVVTSKRSMLDK---------CRL-----PVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 381 i~~~~L~~~GV~v~~~~~~~~~~---------~~~-----~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+.. .| +++.++.+..+.... ... ...||+|++..+|++|+|+++++|+++++.+
T Consensus 311 ~~~-~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 311 LIM-AL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred HHH-hc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 333 23 378877665432110 000 1459999999999999999999999988664
No 235
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=1.9e-15 Score=145.85 Aligned_cols=282 Identities=20% Similarity=0.309 Sum_probs=186.3
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh-ccCCCEEEeCCCchH
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~-~~~gd~Vi~~~~~h~ 204 (442)
++..+++.+.++. |.-..| +...++|+++|+++|.+.++.++||+.|+..++.++ .++||+|+++..++.
T Consensus 15 ~~e~~~v~~vl~s-g~i~~G--------~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tfv 85 (374)
T COG0399 15 EEELAAVQEVLKS-GWLTGG--------PFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFV 85 (374)
T ss_pred hHHHHHHHHHHHc-CCeecC--------hHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchH
Confidence 5778888888876 333323 345799999999999999999999999999999865 699999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccccc----------------------------ccccccccc
Q 013461 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKR----------------------------SNSFGVLGR 250 (442)
Q Consensus 205 s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~----------------------------a~~~g~~G~ 250 (442)
++.+++...|+++++++.+ |++.+|+.+.+.++.... +|++|..-+
T Consensus 86 ATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~ 165 (374)
T COG0399 86 ATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYK 165 (374)
T ss_pred HHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeec
Confidence 9999999999999998754 788888888775432211 444443211
Q ss_pred CCCccccccCCCCCceeEEEEec--cccccCC-CcEEEcC-HHhHHHHH---hhCCc-----------eeccCCCcHHHH
Q 013461 251 SGRGLTEHCGVPVDKIDIVTAAM--GHALATE-GGFCTGS-ARVVDHQR---LSSSG-----------YVFSASLPPYLA 312 (442)
Q Consensus 251 ~g~g~~~~~~v~~~~~diii~S~--sK~lg~~-GG~v~g~-~~~i~~l~---~~~~~-----------~~~s~s~~p~~a 312 (442)
|+.+ ..+| |+.+.|| .|.+++. ||+++.+ +++.+.++ ..+.. ..+..-++.+++
T Consensus 166 -gk~v-Gt~G------d~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqA 237 (374)
T COG0399 166 -GKKV-GSFG------DIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQA 237 (374)
T ss_pred -Cccc-cccc------ceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHH
Confidence 1111 0122 5667777 6888654 7887665 55666554 33321 123445678889
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCC-----CEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 313 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPES-----PIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 313 aaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
|.+++.|+.+++ ..++-+++.+++.+.|++++++.+...+.. ..+.+.+... + ... .++.. .|+
T Consensus 238 Aigl~QL~~l~~---~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-~-~~R-----~~l~~-~L~ 306 (374)
T COG0399 238 AIGLAQLERLDE---INERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-G-ISR-----DALME-SLK 306 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-C-CCH-----HHHHH-HHH
Confidence 888888888765 444555677788888887765544322221 2333334321 1 111 14555 577
Q ss_pred hCCEEEeeccCccc------c-----cCCCCC-------ceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSML------D-----KCRLPV-------GIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 388 ~~GV~v~~~~~~~~------~-----~~~~~~-------~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
+.||.......|.. . ...+|. .+++.+...+|++|+++++++|++++.
T Consensus 307 ~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 307 EAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred hCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 77666222211100 0 012332 299999999999999999999998864
No 236
>PRK07908 hypothetical protein; Provisional
Probab=99.74 E-value=1.7e-15 Score=148.92 Aligned_cols=291 Identities=15% Similarity=0.114 Sum_probs=180.5
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSA 185 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~a 185 (442)
+++++||+.|.. .+..++.+++++.+.+.... .+ .......++++.+|+++|. ++.++++++++++..+
T Consensus 21 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~-~Y-------~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~ 91 (349)
T PRK07908 21 GPGLLDFAVNVR-HDTPPEWLRERLAARLGDLA-AY-------PSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALL 91 (349)
T ss_pred CCCeEEecCCCC-CCCCCHHHHHHHHHHhhHhh-cC-------CCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 568999987642 34457889999998876531 11 1122346899999999984 3455556666888877
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCC-H-HHHHHHHHhhccc-------ccc-------------cc
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-M-DSLRNTLERVTAD-------NKR-------------SN 243 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d-~-~~Le~~l~~~~~~-------~~~-------------a~ 243 (442)
+. +++|+++ +..+++......++..|.+++.++.++ . -+++. ++...+. ++. .+
T Consensus 92 ~~--l~~~~vi-v~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~-l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~ 167 (349)
T PRK07908 92 AR--LRPRRAA-VVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAA-VPDDADLVVIGNPTNPTSVLHPAEQLLALRRP 167 (349)
T ss_pred Hh--cCCCeEE-EeCCCChHHHHHHHHcCCEEEeeccCcccCcChhH-hccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc
Confidence 77 4676655 457888888888888899988776431 0 01121 1111110 000 01
Q ss_pred c-ccccccCCC----cc-ccccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHH
Q 013461 244 S-FGVLGRSGR----GL-TEHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASA 314 (442)
Q Consensus 244 ~-~g~~G~~g~----g~-~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaa 314 (442)
. +-+..+... +- ......+ .+..++++||||.+|++| ||+++++++++.++..... ++ .++...++
T Consensus 168 ~~~iIvDe~y~~~~~~~~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~--~~--~~~~~~~a 242 (349)
T PRK07908 168 GRILVVDEAFADAVPGEPESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAH--WP--VGTLQLEA 242 (349)
T ss_pred CCEEEEECcchhhccCCcccccccc-CCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCC--CC--ccHHHHHH
Confidence 1 111111000 00 0000111 124688999999998766 9999999999988765332 22 23444443
Q ss_pred HHHHHH--HHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE
Q 013461 315 AITAID--VLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF 392 (442)
Q Consensus 315 a~aal~--~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~ 392 (442)
+.+.++ ..+..++.+++++++++++.+.|++. ++++..++.+.++++.+++ ..++.+ .|+++||.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~~-----------~~~~~~-~l~~~gI~ 309 (349)
T PRK07908 243 IAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVPD-----------AELLRK-RLRERGIA 309 (349)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECCc-----------HHHHHH-HHHhCCEE
Confidence 333332 11122456788889999999999887 8887766678888887732 124555 46677999
Q ss_pred EeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 393 VVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 393 v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
+.++..+.. . .+..+||+++ +++|+++++++|++++.
T Consensus 310 v~~g~~f~~-~--~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 310 VRRGDTFPG-L--DPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred EEECCCCCC-C--CCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 998765421 0 1356999995 78999999999988754
No 237
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.74 E-value=7.6e-16 Score=154.25 Aligned_cols=301 Identities=12% Similarity=0.115 Sum_probs=179.8
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh---C--CCcEEEEcchHHHH
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL---G--TPDSILYSYGLSTM 182 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~---g--~e~~i~~~sG~~a~ 182 (442)
|++++||+.++. .+...|.+.+++.+.+++..... ....|+......+|++.+|+++ + .+++++++++.+++
T Consensus 32 ~~~~i~l~~~~~-~~~~~~~v~~~~~~~~~~~~~~~--~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGDT-TQPLPASVIEAFHNAVDELASEE--TFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhcccccc--cccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 467899987753 44456889999998887632110 0011322334467888888765 3 24555555556777
Q ss_pred HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCC-----------eEEEecCCCH--------------------------
Q 013461 183 FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRS-----------TVVYFKHNDM-------------------------- 225 (442)
Q Consensus 183 ~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~-----------~v~~~~~~d~-------------------------- 225 (442)
..+ ..++.+||.|+++.++|..+...++..|. +++.++.++.
T Consensus 109 ~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG 187 (402)
T TIGR03542 109 FRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTG 187 (402)
T ss_pred HHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCC
Confidence 764 45668999999999999999888888888 7776653211
Q ss_pred -----HHHHHHHHhhcccccccccccccccCCC------c--cccccCCCC-CceeEEEEeccccccCCC---cEEEcCH
Q 013461 226 -----DSLRNTLERVTADNKRSNSFGVLGRSGR------G--LTEHCGVPV-DKIDIVTAAMGHALATEG---GFCTGSA 288 (442)
Q Consensus 226 -----~~Le~~l~~~~~~~~~a~~~g~~G~~g~------g--~~~~~~v~~-~~~diii~S~sK~lg~~G---G~v~g~~ 288 (442)
+.++++++... .|++-++-+.-. + ......++. .+..|+++||||.+|++| ||+++++
T Consensus 188 ~~~s~~~~~~l~~~a~-----~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~ 262 (402)
T TIGR03542 188 TVLTKEQLKELVDYAN-----EHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPK 262 (402)
T ss_pred ccCCHHHHHHHHHHHH-----HcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecH
Confidence 11111111100 122222211100 0 000111111 245688999999998777 9999998
Q ss_pred HhH--------HHHHhhCCceeccCCCcHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCC
Q 013461 289 RVV--------DHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESP 358 (442)
Q Consensus 289 ~~i--------~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~ 358 (442)
+++ ....... ...+. +.+++...++.++++.. +...+.++.++++++++.+.|++. ++++..+..++
T Consensus 263 ~l~~~~~~~~~~~~~~~~-~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~ 339 (402)
T TIGR03542 263 ELTYADGHSVIQDWERRQ-CTKFN-GASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYGGEHAP 339 (402)
T ss_pred HHhhcchhhHHHHHHHHh-hhccc-CCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCcee
Confidence 876 2221111 11121 23444444444444321 112235567788889999999886 77765444677
Q ss_pred EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 359 IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 359 i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
++|+.++... + ..++++.+++++||.+.++..+... .+..+||++.. +++++++++++|+++
T Consensus 340 f~~v~l~~~~-----~---~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~~--~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 340 YLWVKTPEGI-----S---SWDFFDFLLYQYHVVGTPGSGFGPS---GEGFVRFSAFG--KRENIVEACERIKEA 401 (402)
T ss_pred EEEEECCCCC-----C---HHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEecC--CHHHHHHHHHHHHhh
Confidence 8888875321 1 2357777776779999998654321 12569999753 789999999999865
No 238
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.73 E-value=5.9e-16 Score=154.36 Aligned_cols=267 Identities=17% Similarity=0.151 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||++||++.|.++++++++|++|+..++.+++++||.|+++.+.|+++.. .+...|+++.+++.+|+++++
T Consensus 64 p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~ 143 (400)
T PRK06234 64 PTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVR 143 (400)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHH
Confidence 4567999999999999999999999999999999999999999999988876543 456789999999988999998
Q ss_pred HHHHhhcccccc---------------------cc--cccccccCCCccccccCCC-CCceeEEEEeccccccCC----C
Q 013461 230 NTLERVTADNKR---------------------SN--SFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALATE----G 281 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~--~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~~----G 281 (442)
+.+.+.++-... .| +.-++-+.-.+.. .++.+ ..+.||++.|++|.+++. |
T Consensus 144 ~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~-~~~~~l~~g~Divv~S~sK~l~g~g~~~g 222 (400)
T PRK06234 144 NALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTP-YIQRPLQLGADVVVHSATKYLNGHGDVIA 222 (400)
T ss_pred HHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCch-hcCCchhhCCcEEEeeccccccCCCCcee
Confidence 888653321110 22 2222211111100 11110 125799999999999753 5
Q ss_pred cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-ee-----cC-
Q 013461 282 GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IA-----SN- 354 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~-----~~- 354 (442)
||+++++++++.++..+....++..++|..++.++..++.+ +.++++.+++..++.+.|.+.+.+. +. +.
T Consensus 223 G~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl---~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~ 299 (400)
T PRK06234 223 GFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTL---QIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFE 299 (400)
T ss_pred EEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCC
Confidence 99999999988887543333456778999888776666544 4467777788888888887654332 11 00
Q ss_pred ----------CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc-------cc-----------CCC
Q 013461 355 ----------PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-------DK-----------CRL 406 (442)
Q Consensus 355 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~-------~~-----------~~~ 406 (442)
..+.++.+.++.. .....++.+. |+-.++.++-+...+. .+ +-.
T Consensus 300 ~~~~~~~~~~~~g~l~s~~l~~~-------~~~~~~f~~~-l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~ 371 (400)
T PRK06234 300 YYELAKKQMSLPGAMISFELKGG-------VEEGKVVMNN-VKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGIS 371 (400)
T ss_pred cHHHHHHhCCCCCceEEEEecCc-------HHHHHHHHHh-CCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCC
Confidence 1356788877421 1223456653 5444444433322110 00 111
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 407 PVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 407 ~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
+.-||+|+.. ||.+.+++-|+++++.
T Consensus 372 ~~l~R~svGl----E~~~dl~~dl~~al~~ 397 (400)
T PRK06234 372 DGLVRLSVGL----EDVDDIIADLKQALDL 397 (400)
T ss_pred CCeEEEEeCC----CCHHHHHHHHHHHHHH
Confidence 2349999997 4555556666655554
No 239
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=1.2e-15 Score=150.31 Aligned_cols=249 Identities=15% Similarity=0.130 Sum_probs=159.8
Q ss_pred HHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhccCC-CEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHH
Q 013461 157 LDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSL 228 (442)
Q Consensus 157 ~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~~~g-d~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~L 228 (442)
.+|++.+|+++|.+ ++++++++++++..++.+++++| |.|+++.++|..+...++..|++++.++.+ |++.+
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l 142 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYI 142 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHH
Confidence 68999999999953 45666666699999999999999 899999999998888888889998888753 34444
Q ss_pred HHHHHhhccc-------ccc---------------ccccccc-ccCCCccccc---cCC-CCCceeEEEEeccccccCCC
Q 013461 229 RNTLERVTAD-------NKR---------------SNSFGVL-GRSGRGLTEH---CGV-PVDKIDIVTAAMGHALATEG 281 (442)
Q Consensus 229 e~~l~~~~~~-------~~~---------------a~~~g~~-G~~g~g~~~~---~~v-~~~~~diii~S~sK~lg~~G 281 (442)
+. +. .++- ++. +.+.-++ .+....+... ... ...+..++++||||++|++|
T Consensus 143 ~~-~~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~G 220 (354)
T PRK04635 143 EQ-LD-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAG 220 (354)
T ss_pred Hh-cc-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhH
Confidence 32 11 1110 000 1111111 1100000000 000 11233578999999998777
Q ss_pred ---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCCCceeecCCC
Q 013461 282 ---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EENPDLITKLKKNTAILRTGLSDIHGLSIASNPE 356 (442)
Q Consensus 282 ---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~ 356 (442)
||+++++++++.+.....++ +.+.....++.++++.. +...+.+++++++++++.+.|++++++++.. +.
T Consensus 221 lRlG~~i~~~~~~~~l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~ 295 (354)
T PRK04635 221 ARCGFTLANEELIEILMRVIAPY----PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLE-GN 295 (354)
T ss_pred HHHhhhhCCHHHHHHHHhhcCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CC
Confidence 99999999999876543322 22444444555565421 1123345678888899999998875577653 46
Q ss_pred CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 357 SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 357 ~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
++++++.+++ ..++.+. |+++||.++....+. .+..+||+++ +++|+++++++|++
T Consensus 296 g~f~~~~~~~-----------~~~~~~~-l~~~gv~v~~~~~~~-----~~~~lRis~~---~~e~~~~l~~al~~ 351 (354)
T PRK04635 296 GNYVLAKFDD-----------VDAVFKA-LWDAGIVARAYKDPR-----LANCIRFSFS---NRAETDKLIGLIRN 351 (354)
T ss_pred CcEEEEECCC-----------HHHHHHH-HHHCCEEEEECCCCC-----CCCeEEEEeC---CHHHHHHHHHHHHH
Confidence 7777776631 1245554 566799997643211 1356999986 88999999999975
No 240
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.73 E-value=5.7e-15 Score=146.00 Aligned_cols=265 Identities=15% Similarity=0.132 Sum_probs=172.3
Q ss_pred cHHHHHHHHHHHhhhCCC----cEEEEcchHHHHHhhhhhhccCCCE-EEeCCCchHHH-HHHHHhcCCeEEEecCC---
Q 013461 153 IDVHLDCEARIAKFLGTP----DSILYSYGLSTMFSAIPCFCKKGDL-IVADEGVHWGI-QNGLYLSRSTVVYFKHN--- 223 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e----~~i~~~sG~~a~~~ai~a~~~~gd~-Vi~~~~~h~s~-~~~~~l~g~~v~~~~~~--- 223 (442)
.+..+++++.+++++|.+ .++++++|++++..++.++..+||. |+....+|+.. ...++..|.+++.++.+
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~ 113 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVE 113 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCC
Confidence 456788999999999974 2566788899999999888777765 56567777663 45567778888776643
Q ss_pred --CHHHHHHHHHhhcccccc---------------------cccccc--ccc--CCCccccccCCCCCceeEEEEecccc
Q 013461 224 --DMDSLRNTLERVTADNKR---------------------SNSFGV--LGR--SGRGLTEHCGVPVDKIDIVTAAMGHA 276 (442)
Q Consensus 224 --d~~~Le~~l~~~~~~~~~---------------------a~~~g~--~G~--~g~g~~~~~~v~~~~~diii~S~sK~ 276 (442)
|++++++.+++.+..... ++..|. +-+ +..|.. ..++...++|++++|++|+
T Consensus 114 ~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~-~~~~~~~~~D~~~~s~~K~ 192 (363)
T TIGR02326 114 PPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGI-PIDIAELHIDYLISSANKC 192 (363)
T ss_pred CCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCc-ccchhhcCccEEEecCccc
Confidence 678888888753211000 111111 111 111111 1233334589999999999
Q ss_pred c-cCCC-cEEEcCHHhHHHHHhhCC------------------ceeccCCCcHHHHHHHHHHHHHHhc---ChHHHHHHH
Q 013461 277 L-ATEG-GFCTGSARVVDHQRLSSS------------------GYVFSASLPPYLASAAITAIDVLEE---NPDLITKLK 333 (442)
Q Consensus 277 l-g~~G-G~v~g~~~~i~~l~~~~~------------------~~~~s~s~~p~~aaaa~aal~~l~~---~~~~~~~l~ 333 (442)
+ |..| ||++++++.++.+..... .+.|+ .++....+..++++.+.+ .+++.++++
T Consensus 193 l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft--~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 193 IQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFT--SPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred cccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCC--CcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 8 5556 999999988876542111 12233 245555555677766543 245778999
Q ss_pred HHHHHHHHhhccCCCceeecC--CCCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCce
Q 013461 334 KNTAILRTGLSDIHGLSIASN--PESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGI 410 (442)
Q Consensus 334 ~~~~~l~~~L~~~~g~~~~~~--~~~~i-~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~i 410 (442)
++.+++++.|.++ |+++..+ ..+|+ .++.+..... ....++.+. |+++||.+.++..+. +..+
T Consensus 271 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~-L~~~gi~v~~g~~~~------~~~i 336 (363)
T TIGR02326 271 QNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD------YRFADFYQR-LKEQGFVIYPGKVSQ------VDCF 336 (363)
T ss_pred HHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC------CCHHHHHHH-HHHCCEEEECCcCCC------CCEE
Confidence 9999999999887 8776543 24554 4555532100 012356664 566799998775431 2459
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHH
Q 013461 411 RLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 411 Ri~~~~~~t~eei~~~i~~l~~~~ 434 (442)
|+++...+|.+|+++++++|++++
T Consensus 337 Ri~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 337 RIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EEecCCCCCHHHHHHHHHHHHHHh
Confidence 999877789999999999998875
No 241
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=4.2e-15 Score=145.27 Aligned_cols=285 Identities=16% Similarity=0.130 Sum_probs=175.4
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHh
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFS 184 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~ 184 (442)
.|.++|||+.+.. .++.+|.+.+++.+++..... +.++ .....++++.+|+++|. ++.++++++++++..
T Consensus 16 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~-----~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 16 EGNYRIWLDKNEN-PFDLPEELKEEIFEELKRVPF--NRYP-----HITSDPLREAIAEFYGLDAENIAVGNGSDELISY 87 (337)
T ss_pred CCCceEEecCCCC-CCCCCHHHHHHHHHHhhcCcc--ccCC-----CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 3457799987742 345568999999988864321 1111 11246899999999984 345555555688877
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhc------ccccc------------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVT------ADNKR------------ 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~------~~~~~------------ 241 (442)
++.++ +||.|+++.++|..+...++..|.+++.++.. |++++++.+.+.. +.++.
T Consensus 88 ~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~~i 165 (337)
T PRK03967 88 LVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAKNASAVFICSPNNPTGNLQPEEEILKV 165 (337)
T ss_pred HHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 76665 79999999999988777778889988877642 4556655432110 00000
Q ss_pred -ccccccc-ccCCCcccc--cc-CCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHH
Q 013461 242 -SNSFGVL-GRSGRGLTE--HC-GVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLAS 313 (442)
Q Consensus 242 -a~~~g~~-G~~g~g~~~--~~-~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aa 313 (442)
.+++-++ .+....+.. +. -+...+..|+++||||++|++| ||+++++++++.++.....+ +.+.+...
T Consensus 166 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~----~~~~~~q~ 241 (337)
T PRK03967 166 LETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPF----SLNILTMK 241 (337)
T ss_pred HhcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCC----CCCHHHHH
Confidence 1111111 110000000 00 0111234789999999999776 99999999999887654332 23555556
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 013461 314 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 314 aa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v 393 (442)
++.++++..+...+.++.+.++++.+.+.|.+. . .++.++++++.+ .+.+.++ ++||.+
T Consensus 242 ~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~~~~~~~~~---------------~~~~~l~-~~gi~v 300 (337)
T PRK03967 242 IVRLALDHYDLIEERIDYIIKERERVRRELGEY-A----YPSDANFLLLKL---------------DAYDYLL-ENGIVV 300 (337)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-c----CCCCCcEEEEhH---------------HHHHHHH-HCCEEE
Confidence 665666533222334455566777788887653 2 135677777654 1455444 569999
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
++.... .+..+||++. +.++.++++++|+++..
T Consensus 301 ~~~~~~------~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 301 RKLSGR------LEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred EeCCCC------CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 864321 1346999987 67888899999887654
No 242
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.72 E-value=7.4e-16 Score=139.16 Aligned_cols=279 Identities=20% Similarity=0.307 Sum_probs=188.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhc-cCCCEEEeCCCch
Q 013461 125 HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFC-KKGDLIVADEGVH 203 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~-~~gd~Vi~~~~~h 203 (442)
..+++++|.++.- +- ..||..+-..+||++.|+++|.|..+|++||+..|..+|+.-+ .||..|++++..|
T Consensus 35 TdeMr~am~eA~v----gD----dVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~H 106 (384)
T KOG1368|consen 35 TDEMRRAMAEASV----GD----DVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAH 106 (384)
T ss_pred hHHHHHHHhhccc----Cc----ccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEeccchh
Confidence 4677888776643 22 2567777778999999999999999999999999999998776 5999999999999
Q ss_pred HHHHHH---HHhcCCeEEEecC-C----CHHHHHHHHHhhcccc-----cc----------------------------c
Q 013461 204 WGIQNG---LYLSRSTVVYFKH-N----DMDSLRNTLERVTADN-----KR----------------------------S 242 (442)
Q Consensus 204 ~s~~~~---~~l~g~~v~~~~~-~----d~~~Le~~l~~~~~~~-----~~----------------------------a 242 (442)
.-.+.. ..++|+.+..+.. + |++++|+.+....... +. .
T Consensus 107 I~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~ 186 (384)
T KOG1368|consen 107 IHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKR 186 (384)
T ss_pred eeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhc
Confidence 876643 3566777766642 2 5778888776432110 00 2
Q ss_pred ccccccccCCCcc---ccccCCCC----CceeEEEEeccccccCC-CcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHH
Q 013461 243 NSFGVLGRSGRGL---TEHCGVPV----DKIDIVTAAMGHALATE-GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASA 314 (442)
Q Consensus 243 ~~~g~~G~~g~g~---~~~~~v~~----~~~diii~S~sK~lg~~-GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaa 314 (442)
|++-..- +|.-+ .-..|++. ...|-+.-+|||++|.+ |..++|++++++..++....+..+.-...+.|++
T Consensus 187 ~glkLH~-DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaa 265 (384)
T KOG1368|consen 187 HGLKLHM-DGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAA 265 (384)
T ss_pred cCCeeec-chhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 2221110 11101 11123321 22355566799999864 7789999999987765543332233335677777
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 013461 315 AITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 315 a~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v 393 (442)
++.+|+. ..+ ..+.-.++...+.+.++..+++++..+ .+++|+.+.+..+. ...+++++. +++.||.+
T Consensus 266 aLval~~--~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~-------~~~~~l~~~-~~k~gi~l 334 (384)
T KOG1368|consen 266 ALVALDE--NVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQAR-------LTAEELCKF-LEKNGILL 334 (384)
T ss_pred HHHHhhc--chH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeeccccc-------CCHHHHHHH-HHHCCeEE
Confidence 7777642 233 566667777778888877655776543 57889888775432 123467775 66789999
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
.++.. .++|+.++...|+++++.+...+.+
T Consensus 335 m~~~s---------~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 335 MGGAS---------RRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred eeccc---------cceEEEEEEecCHHHHHHHHHHHHH
Confidence 87643 2499999999999999999999953
No 243
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.72 E-value=2.6e-15 Score=148.84 Aligned_cols=291 Identities=19% Similarity=0.238 Sum_probs=187.0
Q ss_pred ChHHHHHHHHHHHhc-CCCCCccC-ccccCcHHHHHHHHHHHhhhCCCc---EEEEcchHHHHHhhhhhh---ccCCCEE
Q 013461 125 HEKLLESCTSALEKY-GVGSCGPR-GFYGTIDVHLDCEARIAKFLGTPD---SILYSYGLSTMFSAIPCF---CKKGDLI 196 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~-g~~~~~~~-~~~g~~~~~~~le~~lA~~~g~e~---~i~~~sG~~a~~~ai~a~---~~~gd~V 196 (442)
++.|.+++.+.++++ +.+..+.. ......+...++++.+|+++|.+. ++++++++.++..++.++ .++||.|
T Consensus 12 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~v 91 (371)
T PF00266_consen 12 PKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEV 91 (371)
T ss_dssp BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEE
T ss_pred CHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccccc
Confidence 578999999998763 33322211 112235677899999999999654 566677778999888888 7999999
Q ss_pred EeCCCchHHHHH---H-HHhcCCeEEEecC-----CCHHHHHHHHHhhcccccc-------------------ccccccc
Q 013461 197 VADEGVHWGIQN---G-LYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR-------------------SNSFGVL 248 (442)
Q Consensus 197 i~~~~~h~s~~~---~-~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~-------------------a~~~g~~ 248 (442)
++....|++... . .+..|.++..++. .|++++++.+...+.-... +|..|++
T Consensus 92 l~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~ 171 (371)
T PF00266_consen 92 LVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGAL 171 (371)
T ss_dssp EEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSE
T ss_pred ccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCc
Confidence 999999988662 2 2356788776653 2677888888643322111 1221211
Q ss_pred ----ccCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCce------------------eccC
Q 013461 249 ----GRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGY------------------VFSA 305 (442)
Q Consensus 249 ----G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~~------------------~~s~ 305 (442)
+.+..|.. ..+++..++|++++|..|-+|..| |+++.+++.++.++....++ .|..
T Consensus 172 ~~vD~~~~~g~~-~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (371)
T PF00266_consen 172 LVVDAAQSAGCV-PIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEG 250 (371)
T ss_dssp EEEE-TTTTTTS-S--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSS
T ss_pred eeEechhccccc-cccccccccceeeecccccCCCCchhhheehhhhhhccccccccccccccccchhcccccccccccc
Confidence 11222222 234444578999999999335556 89999999998885433221 1222
Q ss_pred -CCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeec----CCCCCEEEEEecCCCCCchhhHHHH
Q 013461 306 -SLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIAS----NPESPIVFLILEKSTGSMKNDLQLL 378 (442)
Q Consensus 306 -s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~ 378 (442)
+.+.....+..++++.+++ .+.+.++..++.+++++.|.+++++.+.+ ....+++.+.+... + .
T Consensus 251 GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~---~ 321 (371)
T PF00266_consen 251 GTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS------D---A 321 (371)
T ss_dssp SS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS------S---H
T ss_pred cceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC------C---H
Confidence 3344445555678887753 24567888999999999999987777744 23467888888432 1 1
Q ss_pred HHHHHHHHHhCCEEEeeccCccc---ccCCCCCceEEEecCCCCHHHHHHH
Q 013461 379 EDIADWALKEDGVFVVTSKRSML---DKCRLPVGIRLFVSAAHSEADLVKA 426 (442)
Q Consensus 379 ~~i~~~~L~~~GV~v~~~~~~~~---~~~~~~~~iRi~~~~~~t~eei~~~ 426 (442)
.++... |+++||.+..+..... ........+|+|++..+|++|||++
T Consensus 322 ~~~~~~-L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 322 DDVVKY-LEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHH-HHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHHHHH-HhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 345554 5555999998654320 0000124599999999999999975
No 244
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.72 E-value=4.4e-15 Score=147.79 Aligned_cols=300 Identities=15% Similarity=0.093 Sum_probs=178.1
Q ss_pred CChHHHHHHHHHHHhc-CCCCCccCccccC--cHHHHHHHHHHHhhhCC---CcEEEEcchHHHHHhhhhhhc-----cC
Q 013461 124 GHEKLLESCTSALEKY-GVGSCGPRGFYGT--IDVHLDCEARIAKFLGT---PDSILYSYGLSTMFSAIPCFC-----KK 192 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~-g~~~~~~~~~~g~--~~~~~~le~~lA~~~g~---e~~i~~~sG~~a~~~ai~a~~-----~~ 192 (442)
.++.|++++.+.++++ ++.+. ...|+. .+...+..+++++.+|. +++++++++++++..++.++. ++
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~ 88 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNS--LHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKG 88 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCcc--ccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccC
Confidence 3578999999998874 33322 222332 12233333444445553 456667777889888887652 45
Q ss_pred -CCEEEeCCCchHHHHHH---HHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc---------------------c
Q 013461 193 -GDLIVADEGVHWGIQNG---LYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR---------------------S 242 (442)
Q Consensus 193 -gd~Vi~~~~~h~s~~~~---~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~---------------------a 242 (442)
+|.|++....|+++... ++..|.+++.++.+ |++++++.+++.+.-... .
T Consensus 89 ~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~ 168 (382)
T TIGR03403 89 GKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKE 168 (382)
T ss_pred CCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHH
Confidence 57899988888876544 34568888888753 567777776543221100 1
Q ss_pred cccccccc--CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhH-HHHHhhC---CceeccCCCcHHHHHHH
Q 013461 243 NSFGVLGR--SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVV-DHQRLSS---SGYVFSASLPPYLASAA 315 (442)
Q Consensus 243 ~~~g~~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i-~~l~~~~---~~~~~s~s~~p~~aaaa 315 (442)
++.-++-+ .+.|.. ..++...++|+++.|++|.+|..| |+++.++... ......+ ..+ ..++.+.....++
T Consensus 169 ~g~~~ivD~a~~~g~~-~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~~g~~~~~~~-~~gt~~~~~~~al 246 (382)
T TIGR03403 169 RGVLFHTDAVQAIGKI-PVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLFHGGEHMGGR-RSGTLNVPYIVAM 246 (382)
T ss_pred cCCEEEEechhhcCCC-ccCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcccCCCCCCCc-ccCCcChHHHHHH
Confidence 22111111 111111 123333458999999999888766 7776554431 0100000 001 1233454555455
Q ss_pred HHHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCC--C-CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCE
Q 013461 316 ITAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNP--E-SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGV 391 (442)
Q Consensus 316 ~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~--~-~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV 391 (442)
.++++.+.+ .+...++++++++++.+.|++++++++.++. . .+++.+.+... + ..++... |.++||
T Consensus 247 ~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~-L~~~gI 316 (382)
T TIGR03403 247 GEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV------E---GEAMLWD-LNKAGI 316 (382)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC------C---HHHHHHh-hccCCE
Confidence 667776554 3446678889999999999888888887542 2 34666666321 1 2245554 667799
Q ss_pred EEeeccCccccc----------CC----CCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 392 FVVTSKRSMLDK----------CR----LPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 392 ~v~~~~~~~~~~----------~~----~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.++.+..+.... +. ....||++++..+|++|||+++++|+++++++
T Consensus 317 ~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 317 AASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred EEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999764332100 00 01359999999999999999999999988764
No 245
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.72 E-value=8.8e-15 Score=144.90 Aligned_cols=269 Identities=15% Similarity=0.153 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHhhhCCC---c-EEEEcchHHHHHhhhhhhccCCCEEEeC-CCchHHH-HHHHHhcCCeEEEecC-----
Q 013461 154 DVHLDCEARIAKFLGTP---D-SILYSYGLSTMFSAIPCFCKKGDLIVAD-EGVHWGI-QNGLYLSRSTVVYFKH----- 222 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e---~-~i~~~sG~~a~~~ai~a~~~~gd~Vi~~-~~~h~s~-~~~~~l~g~~v~~~~~----- 222 (442)
+...++++.+++++|.+ . .+++++|++++..++.++..+||.|++. ..+++.. ...++..|++++.++.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~ 116 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEP 116 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCC
Confidence 67899999999999964 2 4567788999999999998888876654 4444332 3566777888877764
Q ss_pred CCHHHHHHHHHhhccc--ccc---------------------cccccccccC--CCccccccCCCCCceeEEEEeccccc
Q 013461 223 NDMDSLRNTLERVTAD--NKR---------------------SNSFGVLGRS--GRGLTEHCGVPVDKIDIVTAAMGHAL 277 (442)
Q Consensus 223 ~d~~~Le~~l~~~~~~--~~~---------------------a~~~g~~G~~--g~g~~~~~~v~~~~~diii~S~sK~l 277 (442)
.|++++++.++..+.. ... .++.-++-+. ..|. ...++...++|++++|++|++
T Consensus 117 ~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~-~~~~~~~~~~d~~v~s~~K~l 195 (368)
T PRK13479 117 PDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGA-IPIDIAELGIDALISSANKCI 195 (368)
T ss_pred CCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCC-ccccccccCceEEEecCcccc
Confidence 3678888877643211 000 1221111110 1111 112233335799999999987
Q ss_pred -cCCC-cEEEcCHHhHHHHHhhCCceecc---------------CCCcHHHHHHHHHHHHHHhc---ChHHHHHHHHHHH
Q 013461 278 -ATEG-GFCTGSARVVDHQRLSSSGYVFS---------------ASLPPYLASAAITAIDVLEE---NPDLITKLKKNTA 337 (442)
Q Consensus 278 -g~~G-G~v~g~~~~i~~l~~~~~~~~~s---------------~s~~p~~aaaa~aal~~l~~---~~~~~~~l~~~~~ 337 (442)
|..| ||+++++++++.+.....++.++ .+.+....++..++++.+.+ .++..++++++++
T Consensus 196 ~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~ 275 (368)
T PRK13479 196 EGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQR 275 (368)
T ss_pred ccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 5666 99999999988776433221110 12344444455567776532 2456788999999
Q ss_pred HHHHhhccCCCceeecCC--CCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEe
Q 013461 338 ILRTGLSDIHGLSIASNP--ESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFV 414 (442)
Q Consensus 338 ~l~~~L~~~~g~~~~~~~--~~~i-~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~ 414 (442)
++++.|.++ |+++..++ .+|. ..+.+..... .+ ..++.+. |.++||.+.++..+. +..+|++.
T Consensus 276 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~l~~~-L~~~gi~v~~g~~~~------~~~iRis~ 341 (368)
T PRK13479 276 TLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPA---YD---FKEFYER-LKEQGFVIYPGKLTQ------VDTFRIGC 341 (368)
T ss_pred HHHHHHHHc-CCcccCCchhcCceEEEEECCCCCC---cC---HHHHHHH-HHHCCEEEecCCCCC------CCEEEEec
Confidence 999999887 87765332 3443 3444322110 01 2356665 555699998754321 24599998
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 013461 415 SAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 415 ~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
...+|++|+++++++|++++++.
T Consensus 342 ~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 342 IGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHc
Confidence 77789999999999999987653
No 246
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.71 E-value=6.3e-15 Score=143.66 Aligned_cols=278 Identities=15% Similarity=0.127 Sum_probs=172.2
Q ss_pred eeEEEeecCC-CCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC-cEEEEcchH-HHHHhh
Q 013461 109 KEVVNFASAN-YLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP-DSILYSYGL-STMFSA 185 (442)
Q Consensus 109 ~~~id~~s~~-~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e-~~i~~~sG~-~a~~~a 185 (442)
.++++|+++. .+++ | ..+...+.+..|+. .. ..++++.+|+++|.+ +.+++++|+ +++..+
T Consensus 17 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~y~~-----------~~-~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~ 80 (330)
T TIGR01140 17 EDWLDFSTGINPLGP---P-VPPIPASAWARYPD-----------PE-YDELRAAAAAYYGLPAASVLPVNGAQEAIYLL 80 (330)
T ss_pred hheeEccccCCCCCC---C-hhhcchHHHhhCCC-----------cc-HHHHHHHHHHHhCCChhhEEECCCHHHHHHHH
Confidence 4679998764 3332 3 33333333344432 12 279999999999964 455566655 666665
Q ss_pred hhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhcccc-------cc-----------------
Q 013461 186 IPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVTADN-------KR----------------- 241 (442)
Q Consensus 186 i~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~-------~~----------------- 241 (442)
..+ +++|+ |++..++|..+...++..|.+++.++ |++++++.+++. +.. +.
T Consensus 81 ~~~-l~~g~-vl~~~p~y~~~~~~~~~~g~~~~~~~--d~~~l~~~~~~~-~~v~i~~p~NPtG~~~~~~~~~~l~~~a~ 155 (330)
T TIGR01140 81 PRL-LAPGR-VLVLAPTYSEYARAWRAAGHEVVELP--DLDRLPAALEEL-DVLVLCNPNNPTGRLIPPETLLALAARLR 155 (330)
T ss_pred HHH-hCCCe-EEEeCCCcHHHHHHHHHcCCEEEEeC--CHHHHHhhcccC-CEEEEeCCCCCCCCCCCHHHHHHHHHHhH
Confidence 444 57785 67778888888888888999998887 788888776431 110 00
Q ss_pred cccccccccCCC-cccc---ccCC-CCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHH
Q 013461 242 SNSFGVLGRSGR-GLTE---HCGV-PVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLAS 313 (442)
Q Consensus 242 a~~~g~~G~~g~-g~~~---~~~v-~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aa 313 (442)
.|++-++-+... +... .... +..+.+|+++||||++|++| ||+++++++++.+...... + +.+++.++
T Consensus 156 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~--~~s~~~q~ 231 (330)
T TIGR01140 156 ARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP--W--TVNGPARA 231 (330)
T ss_pred hcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC--C--CchHHHHH
Confidence 222222211110 1110 0111 11356799999999999777 9999999999888765432 2 23445555
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 013461 314 AAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 314 aa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v 393 (442)
++.+.++.-+.....+++++++.+++.+.|++.+.+++. ++.+.++|+.+.+ ..++++.++ ++||.+
T Consensus 232 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~-----------~~~l~~~l~-~~gi~v 298 (330)
T TIGR01140 232 AGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD-----------AAALHEALA-RRGILI 298 (330)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC-----------HHHHHHHHH-HCCEEE
Confidence 555555422212456788999999999999987446654 3456677776531 236777655 469999
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
.++..+.. ..++.+|++++. ..++ ++++++|
T Consensus 299 ~pg~~f~~---~~~~~iRi~~~~--~~~~-~~~~~~l 329 (330)
T TIGR01140 299 RDFDNFPG---LDPRYLRFALPT--DEEN-DRLEEAL 329 (330)
T ss_pred EECCCCCC---CCCCEEEEEecC--HHHH-HHHHHhh
Confidence 99877521 113469999974 2244 7777765
No 247
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.71 E-value=9.7e-15 Score=144.12 Aligned_cols=280 Identities=18% Similarity=0.237 Sum_probs=184.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh-ccCCCEEEeCCCchH
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~-~~~gd~Vi~~~~~h~ 204 (442)
++..+++.+.++. +.-+. ..+...++|+++++++|.+.++.++||+.|+..++.++ .++||.|+++..++.
T Consensus 5 ~e~~~~v~~~l~s-~~~~~-------~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~ 76 (363)
T PF01041_consen 5 EEEIDAVLEVLRS-GWLST-------YGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP 76 (363)
T ss_dssp HHHHHHHHHHHHH-TCCSS-------SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T
T ss_pred HHHHHHHHHHHHh-CCccC-------CCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcch
Confidence 4566777777776 22111 13677999999999999999999999999999999887 589999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccccc----------------------------ccccccccc
Q 013461 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKR----------------------------SNSFGVLGR 250 (442)
Q Consensus 205 s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~----------------------------a~~~g~~G~ 250 (442)
++..++...|+++++++.+ |++++++.+.+.++.... +|++|..-
T Consensus 77 ~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~- 155 (363)
T PF01041_consen 77 ATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARY- 155 (363)
T ss_dssp HHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EE-
T ss_pred HHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecCCCCcccHHHHHHHHHHcCCcEEEccccccCcee-
Confidence 9999999999999998854 788999988876542211 34433211
Q ss_pred CCCccccccCCCCCceeEEEEec--cccccC-CCcEEEcC-HHhHHHHHhh---CCc------------eeccCCCcHHH
Q 013461 251 SGRGLTEHCGVPVDKIDIVTAAM--GHALAT-EGGFCTGS-ARVVDHQRLS---SSG------------YVFSASLPPYL 311 (442)
Q Consensus 251 ~g~g~~~~~~v~~~~~diii~S~--sK~lg~-~GG~v~g~-~~~i~~l~~~---~~~------------~~~s~s~~p~~ 311 (442)
.|+. .| .--|+.+.|| +|.+.. .||+++.+ +++.+.++.. +.. ..+...++++.
T Consensus 156 ~g~~----~G---~~gd~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~ 228 (363)
T PF01041_consen 156 KGRP----VG---SFGDIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQ 228 (363)
T ss_dssp TTEE----TT---SSSSEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHH
T ss_pred CCEe----cc---CCCCceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHH
Confidence 1111 11 1127888888 598853 47887665 5566655432 211 12344578999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCC------CCEEEEEecCCCCCchhhHHHHHHHHHHH
Q 013461 312 ASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE------SPIVFLILEKSTGSMKNDLQLLEDIADWA 385 (442)
Q Consensus 312 aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~i~~~~ 385 (442)
++.++..|+.+++ ..++-+++.+++.+.|.+++++.....+. ...+.+.+.+... .. -.++.+.
T Consensus 229 AAigl~QL~~L~~---~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~-~~-----rd~l~~~- 298 (363)
T PF01041_consen 229 AAIGLAQLKRLDE---IIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL-AD-----RDELVEA- 298 (363)
T ss_dssp HHHHHHHHHTHHH---HHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC-ST-----HHHHHHH-
T ss_pred HHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc-ch-----HHHHHHH-
Confidence 9998888887754 55666788899999999887764432211 2245555643211 01 1256664
Q ss_pred HHhCCEEEeeccCcccc------------cCCCCC-------ceEEEecCCCCHHHHHHHHHHHH
Q 013461 386 LKEDGVFVVTSKRSMLD------------KCRLPV-------GIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 386 L~~~GV~v~~~~~~~~~------------~~~~~~-------~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
|++.||.+.+....... ...+|. .|.+.++..+|++|+++++++|+
T Consensus 299 L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 299 LRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 66779999876631111 011222 29999999999999999999875
No 248
>PLN02397 aspartate transaminase
Probab=99.71 E-value=3.9e-15 Score=149.76 Aligned_cols=295 Identities=16% Similarity=0.094 Sum_probs=174.8
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhc-CCCCCccCccccCcHHHHHHHHHHHhhhC-C------Cc-E----EE
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKY-GVGSCGPRGFYGTIDVHLDCEARIAKFLG-T------PD-S----IL 174 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~-g~~~~~~~~~~g~~~~~~~le~~lA~~~g-~------e~-~----i~ 174 (442)
+...||++..++....++|.+.+++.++.... ..+. ...|+......+|++.+++++. . ++ + ++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~---~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~ 123 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSR---NKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCL 123 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCC---CCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecc
Confidence 34568888877666655666666666654331 0111 0123333444677777777652 1 12 2 22
Q ss_pred EcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhcccccc------
Q 013461 175 YSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKR------ 241 (442)
Q Consensus 175 ~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~~~~------ 241 (442)
.++|+.++..++.+++.|||.|++++++|+.+...++..|++++.++. .|++.+++.++..+++...
T Consensus 124 ~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P 203 (423)
T PLN02397 124 SGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACA 203 (423)
T ss_pred cchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCC
Confidence 233444455555566679999999999999999999999999988753 2567777666543222111
Q ss_pred ---------------------cccccccccC-CCccc---------cccCC-CCCceeEEEEeccccccCCC---cEEE-
Q 013461 242 ---------------------SNSFGVLGRS-GRGLT---------EHCGV-PVDKIDIVTAAMGHALATEG---GFCT- 285 (442)
Q Consensus 242 ---------------------a~~~g~~G~~-g~g~~---------~~~~v-~~~~~diii~S~sK~lg~~G---G~v~- 285 (442)
.|++-++-+. ...+. ..... ...+..|+++||||++++.| ||++
T Consensus 204 ~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~ 283 (423)
T PLN02397 204 HNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSV 283 (423)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEE
Confidence 2333222111 11110 00000 01234688999999999877 9973
Q ss_pred --cCHHhHHHH----HhhCCceeccCCCcHHHHHHHHHHHHHH-------hcChHHHHHHHHHHHHHHHhhccCCC----
Q 013461 286 --GSARVVDHQ----RLSSSGYVFSASLPPYLASAAITAIDVL-------EENPDLITKLKKNTAILRTGLSDIHG---- 348 (442)
Q Consensus 286 --g~~~~i~~l----~~~~~~~~~s~s~~p~~aaaa~aal~~l-------~~~~~~~~~l~~~~~~l~~~L~~~~g---- 348 (442)
+++++++.+ ...... .++ +.+...+.++.++++.- +...+++++++++++.+.+.|+++ |
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~ 360 (423)
T PLN02397 284 VCKSADVAVRVKSQLKLIARP-MYS-NPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-GSPGD 360 (423)
T ss_pred EeCCHHHHHHHHHHHHHHHhc-ccC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence 566655433 222111 121 22444444444445321 112356778999999999999987 5
Q ss_pred ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHH
Q 013461 349 LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACE 428 (442)
Q Consensus 349 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~ 428 (442)
+.+..+.++.++|+.+. .++++++++++||++.+ . .|+++.. .+++.++++++
T Consensus 361 ~~~~~p~gg~fl~~~l~-------------~~~~~~Ll~~~~V~v~~------------~-~Ri~~~~-~~~~~i~~~~~ 413 (423)
T PLN02397 361 WSHITKQIGMFSFTGLN-------------KEQVDRMTKEYHIYMTR------------D-GRISMAG-LSSKNVPYLAD 413 (423)
T ss_pred CCcccCCceEEEecCCC-------------HHHHHHHHHhCCEEECC------------C-CeEEEee-CCHHHHHHHHH
Confidence 56544445555565541 14777788888999852 2 3999964 68899999999
Q ss_pred HHHHHHH
Q 013461 429 SLKRISA 435 (442)
Q Consensus 429 ~l~~~~~ 435 (442)
+|++++.
T Consensus 414 ~i~~~~~ 420 (423)
T PLN02397 414 AIHAVVT 420 (423)
T ss_pred HHHHHHh
Confidence 9999864
No 249
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.71 E-value=7.4e-15 Score=148.31 Aligned_cols=316 Identities=15% Similarity=0.121 Sum_probs=186.5
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHh--c---CCCCCccCccccCcHHHHHHHHHHHhhhC----C------CcE
Q 013461 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEK--Y---GVGSCGPRGFYGTIDVHLDCEARIAKFLG----T------PDS 172 (442)
Q Consensus 109 ~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~--~---g~~~~~~~~~~g~~~~~~~le~~lA~~~g----~------e~~ 172 (442)
.-+|||+.. |.|- ++.+.+.+.+..+. . +...+.....|+......+|++.+|++++ . +++
T Consensus 47 ~g~i~l~~aeN~l~---~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I 123 (447)
T PLN02607 47 SGVIQMGLAENQVS---FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI 123 (447)
T ss_pred CceEEEechhhhhh---HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence 348887543 5442 35566655554331 0 00000011112222233556666666553 1 245
Q ss_pred EEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH-hcCCeEEEecCC-------CHHHHHHHHHhhcc---ccc-
Q 013461 173 ILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKHN-------DMDSLRNTLERVTA---DNK- 240 (442)
Q Consensus 173 i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~-l~g~~v~~~~~~-------d~~~Le~~l~~~~~---~~~- 240 (442)
++++++++++..++.+++++||.|+++.|+|+.....+. ..|++++.++.+ |++++++.+++..+ +.+
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~ 203 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG 203 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence 666666799999889999999999999999998877676 368888877532 57788887765211 111
Q ss_pred ---------c-----------------cccccc----------cccC-CCccccc---cCC-CCCceeEEEEeccccccC
Q 013461 241 ---------R-----------------SNSFGV----------LGRS-GRGLTEH---CGV-PVDKIDIVTAAMGHALAT 279 (442)
Q Consensus 241 ---------~-----------------a~~~g~----------~G~~-g~g~~~~---~~v-~~~~~diii~S~sK~lg~ 279 (442)
. .|++-+ ++.. ...+.+. .+. +..+..+++.||||.||+
T Consensus 204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~ 283 (447)
T PLN02607 204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL 283 (447)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence 0 122211 1110 0011110 111 112456889999999998
Q ss_pred CC---cEEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHH---Hh-cChHHHHHHHHHHHHHHHhhccCCCcee
Q 013461 280 EG---GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV---LE-ENPDLITKLKKNTAILRTGLSDIHGLSI 351 (442)
Q Consensus 280 ~G---G~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~---l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 351 (442)
.| ||+++ ++++++.++... . ++. .+.....++.+.|+. .+ .....+++++++.+.+.+.|++. |+++
T Consensus 284 ~GlRvG~ivs~n~~l~~~~~~~~-~--~~~-~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~ 358 (447)
T PLN02607 284 PGFRVGTIYSYNDKVVTTARRMS-S--FTL-VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIEC 358 (447)
T ss_pred CcceEEEEEEcCHHHHHHHHHHh-h--cCC-CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCc
Confidence 77 99988 677777665442 1 221 233333333333331 11 11345677888888899999886 8876
Q ss_pred ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 352 ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 352 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
..+..+.++|+.++...... ......++.++++++.||.+.|+..+.. .-|+.+||+++. .+++++++++++|.
T Consensus 359 ~~~~ag~fvw~~L~~~~~~~--~~~~e~~l~~~ll~~~gV~v~pG~~f~~---~~~g~fRi~fa~-~~~~~l~~gl~Ri~ 432 (447)
T PLN02607 359 LKGNAGLFCWMNLSPLLETP--TREGELALWDSILREVKLNISPGSSCHC---SEPGWFRVCFAN-MSEDTLEVALKRIH 432 (447)
T ss_pred ccCCeeEEEEEEchHhhcCC--CchhHHHHHHHHHHhCCEEEcCccccCC---CCCCEEEEEecc-CCHHHHHHHHHHHH
Confidence 65555778888874311100 0011235666677777999999876432 125679999986 46899999999999
Q ss_pred HHHHHHh
Q 013461 432 RISAVVL 438 (442)
Q Consensus 432 ~~~~~~~ 438 (442)
+++.+-.
T Consensus 433 ~~l~~~~ 439 (447)
T PLN02607 433 RFMDRRK 439 (447)
T ss_pred HHHHHHH
Confidence 9987654
No 250
>PRK05968 hypothetical protein; Provisional
Probab=99.70 E-value=2.6e-15 Score=149.22 Aligned_cols=263 Identities=19% Similarity=0.163 Sum_probs=171.0
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~L 228 (442)
.+.+.+||+++|+++|.+.++++++|+.|+..++.+++++||.|++..+.|.+.. ..+...|.++.+++.+|++++
T Consensus 62 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 141 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAV 141 (389)
T ss_pred ChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHH
Confidence 3557899999999999999999999999999999999999999999888888754 345567899999988889998
Q ss_pred HHHHHhhcccc-------cc------------c--ccccccccC--CCccccccCCCCCceeEEEEeccccccC----CC
Q 013461 229 RNTLERVTADN-------KR------------S--NSFGVLGRS--GRGLTEHCGVPVDKIDIVTAAMGHALAT----EG 281 (442)
Q Consensus 229 e~~l~~~~~~~-------~~------------a--~~~g~~G~~--g~g~~~~~~v~~~~~diii~S~sK~lg~----~G 281 (442)
++.+.+ ++-. .. + |+.-++-+. +.+. ....+ ..+.|+++.|++|.++. .|
T Consensus 142 ~~~i~~-tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~-~~~p~-~~g~Divv~S~tK~l~g~~~~~g 218 (389)
T PRK05968 142 AKALPG-AKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPV-FQRPI-TLGVDLVIHSASKYLGGHSDTVA 218 (389)
T ss_pred HHhccc-CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchh-ccCch-hcCCcEEEeeccccccCCCCeEE
Confidence 887632 1110 00 2 222222111 1111 01112 23568999999999975 26
Q ss_pred cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCC------
Q 013461 282 GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNP------ 355 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~------ 355 (442)
|++++++++++.++.....+ +.+.++|+.++.++.+|+.+ +.+.++-.++.+++.+.|++.|++..+..+
T Consensus 219 G~i~~~~~~~~~l~~~~~~~-~g~~~~~~~A~~~l~~L~tl---~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~ 294 (389)
T PRK05968 219 GVVAGSKEHIARINAEAYPY-LGAKLSPFEAWLLLRGLRTL---PLRMKAHEASALEIARRLKAHPVVERVCHPALANHP 294 (389)
T ss_pred EEEEECHHHHHHHHHHHHHh-CCCCCChHHHHHHHcccCcH---HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCh
Confidence 89999999888776432222 23567888888776666655 446777777888999999888776433221
Q ss_pred ------CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc-------------c----cCCC-CCceE
Q 013461 356 ------ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-------------D----KCRL-PVGIR 411 (442)
Q Consensus 356 ------~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~-------------~----~~~~-~~~iR 411 (442)
.+.++.+.++. .....++++. |+..++.++-+...+. . .... +..||
T Consensus 295 ~~~~~g~g~~~sf~~~~--------~~~~~~f~~~-L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR 365 (389)
T PRK05968 295 PAGLSGTSGLFSFIFRE--------GIDVRAFADA-LKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVR 365 (389)
T ss_pred HHhCCCCceEEEEEECC--------HHHHHHHHHh-CCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEE
Confidence 24588888742 1124567764 5555655554433220 0 1111 23499
Q ss_pred EEecCCCCHHHHHHHHHHHH
Q 013461 412 LFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 412 i~~~~~~t~eei~~~i~~l~ 431 (442)
+|+....+++=++.+-++|+
T Consensus 366 ~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 366 LHVGLEGTEALWADLEQALA 385 (389)
T ss_pred EEeccCCHHHHHHHHHHHHH
Confidence 99998554444444444443
No 251
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.70 E-value=1.6e-14 Score=143.56 Aligned_cols=288 Identities=16% Similarity=0.201 Sum_probs=182.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh-ccCCCEEEeCCCchH
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~-~~~gd~Vi~~~~~h~ 204 (442)
++-++++.++++.... + ..+...++|+.+|+++|.++++++++|++|+..++.++ .++||.|+++.+.|.
T Consensus 10 ~~~~~~v~~~~~~~~~-~--------~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~ 80 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL-T--------QGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFV 80 (380)
T ss_pred HHHHHHHHHHHhcCCc-c--------CChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchH
Confidence 4557777777765211 1 12346899999999999999999999999999999988 799999999999999
Q ss_pred HHHHHHHhcCCeEEEecC------CCHHHHHHHHHh----hcccccc------------------cccccccccC--CCc
Q 013461 205 GIQNGLYLSRSTVVYFKH------NDMDSLRNTLER----VTADNKR------------------SNSFGVLGRS--GRG 254 (442)
Q Consensus 205 s~~~~~~l~g~~v~~~~~------~d~~~Le~~l~~----~~~~~~~------------------a~~~g~~G~~--g~g 254 (442)
++...+...|+++++++. .|++++++.+++ .+..... .|++-++-+. ..|
T Consensus 81 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g 160 (380)
T TIGR03588 81 ATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDFAGKSVDMQAIAALAKKHGLKIIEDASHALG 160 (380)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeCCCCccCCHHHHHHHHHHcCCEEEEECCCccc
Confidence 999889999999988764 267888888863 2111000 1221111111 111
Q ss_pred cccccCCCCCc----eeEEEEecc--ccccC-CCcEEEc-CHHhHHHHHhh---CCc-------------e-------ec
Q 013461 255 LTEHCGVPVDK----IDIVTAAMG--HALAT-EGGFCTG-SARVVDHQRLS---SSG-------------Y-------VF 303 (442)
Q Consensus 255 ~~~~~~v~~~~----~diii~S~s--K~lg~-~GG~v~g-~~~~i~~l~~~---~~~-------------~-------~~ 303 (442)
.. ++..+-+ -|+.+.|++ |.++. .||+++. ++++.+.++.. +.. + .+
T Consensus 161 ~~--~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 238 (380)
T TIGR03588 161 AE--YGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGF 238 (380)
T ss_pred Cc--cCCEeCCCccccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeecccc
Confidence 10 1111112 288898987 88854 5676654 56676655431 100 0 11
Q ss_pred cCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCC----CC-EEEEEecCCCCCchhhHHHH
Q 013461 304 SASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE----SP-IVFLILEKSTGSMKNDLQLL 378 (442)
Q Consensus 304 s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~----~~-i~~~~~~~~~~~~~~~~~~~ 378 (442)
...++.+.++.+++.|+.+ ++..++-+++.+++.+.|.+++++.....+. ++ ++.+.+....+ . + .
T Consensus 239 n~~m~~l~aa~g~~qL~~l---~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~--~---r 309 (380)
T TIGR03588 239 NYRMTDIQAALGLSQLKKL---DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFG-C--T---R 309 (380)
T ss_pred ccCccHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCC-C--C---H
Confidence 2345677777777776655 4567777889999999999886665432211 12 22333322111 1 1 1
Q ss_pred HHHHHHHHHhCCEEEeeccCccc---------ccCCCC-------CceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 379 EDIADWALKEDGVFVVTSKRSML---------DKCRLP-------VGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 379 ~~i~~~~L~~~GV~v~~~~~~~~---------~~~~~~-------~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
.++.+ .|+++||.++....+.. ....+| ..|+++++..+|++|+++++++|++++
T Consensus 310 ~~l~~-~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 310 KEVFE-ALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHH-HHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 25666 46777998875443211 111123 239999999999999999999998763
No 252
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.70 E-value=1.5e-14 Score=144.66 Aligned_cols=271 Identities=17% Similarity=0.157 Sum_probs=179.5
Q ss_pred CcHHHHHHHHHHHhhhCCC---cEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHH--HHHHHhcCCeEEEecCC---
Q 013461 152 TIDVHLDCEARIAKFLGTP---DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGI--QNGLYLSRSTVVYFKHN--- 223 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e---~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~--~~~~~l~g~~v~~~~~~--- 223 (442)
..+...++++.+++++|.+ .+++.++|++++..++..+.++||.|++..+.|++. ...++..|.+++.++.+
T Consensus 40 ~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~ 119 (401)
T PLN02409 40 FPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ 119 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCC
Confidence 4678889999999999964 357777888999999988899999999888777665 34556678888877643
Q ss_pred --CHHHHHHHHHhhc-ccccc------cccccc--------------------cc--cCCCccccccCCCCCceeEEEEe
Q 013461 224 --DMDSLRNTLERVT-ADNKR------SNSFGV--------------------LG--RSGRGLTEHCGVPVDKIDIVTAA 272 (442)
Q Consensus 224 --d~~~Le~~l~~~~-~~~~~------a~~~g~--------------------~G--~~g~g~~~~~~v~~~~~diii~S 272 (442)
|++++++.++..+ ++.+. ....|+ +- .+..|.. ..+++..++|+++.|
T Consensus 120 ~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~-~id~~~~~~D~~~~s 198 (401)
T PLN02409 120 GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGAL-DFRMDEWGVDVALTG 198 (401)
T ss_pred CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCc-cccccccCccEEEEc
Confidence 5788888887521 11111 111121 11 1111111 122222367999999
Q ss_pred ccccccC-CC-cEEEcCHHhHHHHHhhC-Cceec---------------cCCCcHHHHHHHHHHHHHHhc--ChHHHHHH
Q 013461 273 MGHALAT-EG-GFCTGSARVVDHQRLSS-SGYVF---------------SASLPPYLASAAITAIDVLEE--NPDLITKL 332 (442)
Q Consensus 273 ~sK~lg~-~G-G~v~g~~~~i~~l~~~~-~~~~~---------------s~s~~p~~aaaa~aal~~l~~--~~~~~~~l 332 (442)
.+|++++ .| ||++.+++.++.+.... .++.+ ..+.+.....+..++++.+.+ .+.+.++.
T Consensus 199 ~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~ 278 (401)
T PLN02409 199 SQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARH 278 (401)
T ss_pred CccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9999954 44 89999999888775422 11111 112233344556678887654 25678889
Q ss_pred HHHHHHHHHhhccCCCceeecCC---CCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 333 KKNTAILRTGLSDIHGLSIASNP---ESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 333 ~~~~~~l~~~L~~~~g~~~~~~~---~~~-i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
+++.+++++.|.++ |+++..+. .++ +.++.++... + ..++.+.++++.||.+..+..+.. ..
T Consensus 279 ~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~-----~---~~~l~~~l~~~~~i~i~~G~~~~~-----~~ 344 (401)
T PLN02409 279 ARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEGI-----D---SAEIVKNAWKKYNLSLGLGLNKVA-----GK 344 (401)
T ss_pred HHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCCC-----C---HHHHHHHHHHhCCEEEEcCCCccc-----CC
Confidence 99999999999887 88876531 243 3445443211 1 235666666778999988754311 23
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
.+||+....+|++|+..++++|++++.++
T Consensus 345 ~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 345 VFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 49999999999999999999999988764
No 253
>PLN02242 methionine gamma-lyase
Probab=99.70 E-value=4.5e-15 Score=148.35 Aligned_cols=196 Identities=14% Similarity=0.161 Sum_probs=135.3
Q ss_pred CcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH-----HhcCCeEEEecCCCHH
Q 013461 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL-----YLSRSTVVYFKHNDMD 226 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~-----~l~g~~v~~~~~~d~~ 226 (442)
..+.+.+||+++|+++|.+.++++++|++|+..++.+++++||.|+++.+.|+.+...+ +..|.+++.++..|++
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e 153 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLE 153 (418)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHH
Confidence 36778999999999999999999999999999999999999999999999887765543 3467888888877888
Q ss_pred HHHHHHHhh-cccccc---------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCC----
Q 013461 227 SLRNTLERV-TADNKR---------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE---- 280 (442)
Q Consensus 227 ~Le~~l~~~-~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~---- 280 (442)
++++.+++. ++-... .|++-++-+.-.+.. .++....+.||++.||+|++++.
T Consensus 154 ~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~-~~~~~~~g~divv~S~SK~l~g~g~~~ 232 (418)
T PLN02242 154 AVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPM-VLSPARLGADVVVHSISKFISGGADII 232 (418)
T ss_pred HHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCcc-CCCHHHcCCcEEEEeCccccCCCCCce
Confidence 888877542 221100 222222222111110 01111124799999999999754
Q ss_pred CcEEEcCHHhHHHHHhhCCc--eeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceee
Q 013461 281 GGFCTGSARVVDHQRLSSSG--YVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA 352 (442)
Q Consensus 281 GG~v~g~~~~i~~l~~~~~~--~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 352 (442)
|||+++++++++.++..... ...+..++|..++.....+ +..+.++++.+++++++.+.|++. ++++.
T Consensus 233 gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~tl~~r~~~~~~~a~~la~~L~~~-~~~V~ 302 (418)
T PLN02242 233 AGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PHLSLRMKEHCRRAMEYAKRMKEL-GLKVI 302 (418)
T ss_pred EEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---CcHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 59999999999888755332 2233445566555443333 233456788899999999999887 55554
No 254
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.70 E-value=2.8e-15 Score=148.96 Aligned_cols=265 Identities=13% Similarity=0.084 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHh----cCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYL----SRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l----~g~~v~~~~~~d~~~Le 229 (442)
+...+||+.+|+++|.+.++++++|+.|+..++.+++++||.|+++.+.|+.....+.. .+.++..++..|+++++
T Consensus 61 pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~ 140 (386)
T PRK06767 61 PTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIE 140 (386)
T ss_pred cchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHH
Confidence 44689999999999999999999999999999999999999999999998887665432 34555566666778887
Q ss_pred HHHHhhcccccc---------------------cccccccccCCCccccccCCC-CCceeEEEEeccccccCC----CcE
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALATE----GGF 283 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~~----GG~ 283 (442)
+.+++.++-... .++.-++-+.-.+ ....+.+ ....|+++.|++|.+++. ||+
T Consensus 141 ~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a-~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~ 219 (386)
T PRK06767 141 NKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFC-SPYLQRPLELGCDAVVHSATKYIGGHGDVVAGV 219 (386)
T ss_pred HhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCc-ccccCCchhcCCcEEEecCcceecCCCCceeEE
Confidence 776543221100 2221111111111 0011111 135689999999999754 699
Q ss_pred EEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecC---------
Q 013461 284 CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN--------- 354 (442)
Q Consensus 284 v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~--------- 354 (442)
++++++.++.+...... ...+.++|+.+++++.+++.+ +.++++.+++.+++.+.|++.|+++....
T Consensus 220 v~~~~~~i~~~~~~~~~-~~g~~~~~~~a~l~~~~L~tl---~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~ 295 (386)
T PRK06767 220 TICKTRALAEKIRPMRK-DIGGIMAPFDAWLLLRGLKTL---AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQ 295 (386)
T ss_pred EEeChHHHHHHHHHHHH-HhCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHh
Confidence 99999888775432111 233456788777665555443 45778889999999999999888764221
Q ss_pred --CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc-------cc----------CCC-CCceEEEe
Q 013461 355 --PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-------DK----------CRL-PVGIRLFV 414 (442)
Q Consensus 355 --~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~-------~~----------~~~-~~~iRi~~ 414 (442)
..++++.+.++.. .....++++. |+..++.++-+...+. .+ ... +.-||+|+
T Consensus 296 ~~~~gg~vsf~l~~~-------~~~~~~f~~~-l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv 367 (386)
T PRK06767 296 MKRGGGVISFSIKGG-------KEETQAFIND-LHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSV 367 (386)
T ss_pred CCCCCceEEEEEcCC-------HHHHHHHHHh-CCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEe
Confidence 2456888888421 1224567764 6655666654432111 00 011 23499999
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 013461 415 SAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 415 ~~~~t~eei~~~i~~l~~~~~ 435 (442)
.. ||.+.+++-|++++.
T Consensus 368 Gl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 368 GL----ESWEDIVSDLEQALK 384 (386)
T ss_pred cc----CCHHHHHHHHHHHHh
Confidence 87 556666666666654
No 255
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.69 E-value=4e-15 Score=147.81 Aligned_cols=191 Identities=16% Similarity=0.163 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|+++|.+.++++++|++|+..++.+++++||.|+++.+.|+.... .+...|+++.+++.+|+++++
T Consensus 59 p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~ 138 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVK 138 (391)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHH
Confidence 4568999999999999999999999999999999999999999999988765443 345578889888888888888
Q ss_pred HHHHhhcccccc---------------------cccccccccCC--CccccccCCCCCceeEEEEeccccccCC----Cc
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSG--RGLTEHCGVPVDKIDIVTAAMGHALATE----GG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g--~g~~~~~~v~~~~~diii~S~sK~lg~~----GG 282 (442)
+.+...++-... .++.-++-+.. .+... ..+ ....|+++.|++|.+|+. ||
T Consensus 139 ~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~~~-~~g~Divv~S~sK~lgg~g~~~gG 216 (391)
T TIGR01328 139 AHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLT-NPV-ALGVDVVVHSATKYIGGHGDVVAG 216 (391)
T ss_pred HhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccC-Cch-hcCCCEEEccccccccCCCCceEE
Confidence 777543221100 22211111111 11110 011 135689999999999753 58
Q ss_pred EEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
++++++++++.++.......+++.++|..++.++..++.+ +.++++.+++.+++.+.|++.|++
T Consensus 217 ~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl---~~r~~~~~~na~~la~~L~~~p~v 280 (391)
T TIGR01328 217 LICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTL---NIRMKRHSENAMKVAEYLKSHPAV 280 (391)
T ss_pred EEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999999998887543233345567888887776655444 456788888999999999877654
No 256
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.69 E-value=1.9e-15 Score=147.32 Aligned_cols=302 Identities=22% Similarity=0.269 Sum_probs=175.8
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHH----HHHHhhhCCC----cE-EEEcc
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCE----ARIAKFLGTP----DS-ILYSY 177 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le----~~lA~~~g~e----~~-i~~~s 177 (442)
++.||| +|-||. +|.+.++....+.+ |..|+.|.| +||..+...++| +++.+++|.+ .+ +=.-|
T Consensus 20 ~~~l~LiaSEN~~----Sp~v~~al~S~l~nkyaeg~pg~r-yy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~S 94 (399)
T PF00464_consen 20 RSTLNLIASENYM----SPAVREALGSDLTNKYAEGYPGKR-YYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHS 94 (399)
T ss_dssp HHSEE-CTT---------HHHHHHHTSGGGGS-TTEETTEE-SSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SS
T ss_pred hcCccccCccccc----CHHHHHHhCCcceeeccccCCCcc-cccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCC
Confidence 356888 787874 58888887776654 656666655 455555555543 4566788988 65 44568
Q ss_pred hHHHHHhhhhhhccCCCEEEeCCCchHHHH-HHHH---------hcCCeEEEecCC------CHHHHHHHHHhhcccccc
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQ-NGLY---------LSRSTVVYFKHN------DMDSLRNTLERVTADNKR 241 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~-~~~~---------l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~ 241 (442)
|+.|+..++.++++|||.|+.-+..|+.-. .+.. ...-+.+.|+.+ |++.+++++++..++...
T Consensus 95 Gs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi 174 (399)
T PF00464_consen 95 GSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLII 174 (399)
T ss_dssp HHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEE
T ss_pred chHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEE
Confidence 999999999999999999987655543321 1111 111234444432 789999999887765322
Q ss_pred ------------------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcC---
Q 013461 242 ------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGS--- 287 (442)
Q Consensus 242 ------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~--- 287 (442)
+|-.|.+. .|. +.-+.+..|++++|.+|+| |..||++..+
T Consensus 175 ~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa---~g~---~~~P~~~ADvvt~sThKtl~GPrggiI~~~~~~ 248 (399)
T PF00464_consen 175 CGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIA---GGL---FPNPFPYADVVTGSTHKTLRGPRGGIILTNKGS 248 (399)
T ss_dssp EE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHH---TTS---S--GCCTSSEEEEESSGGG-SSS-EEEEES-SE
T ss_pred ECchhccCccCHHHHHHHHHhcCcEEEeccccccccee---hhe---ecCccccceEEEeeccccccccCceEEEEcCCc
Confidence 44434331 111 1112234799999999999 7789999988
Q ss_pred -----------HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhccCCCceeec-C
Q 013461 288 -----------ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLSDIHGLSIAS-N 354 (442)
Q Consensus 288 -----------~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~ 354 (442)
+++.+.+...-.+...++......++-|.+..+.+. +..+..+++.+|.+.|.+.|.+. |+++.. .
T Consensus 249 ~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~gg 327 (399)
T PF00464_consen 249 KNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGG 327 (399)
T ss_dssp EEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS
T ss_pred cccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECC
Confidence 788888876655544443223333333333333333 34678889999999999999986 998864 4
Q ss_pred CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecC----CCCHHHHHHHHHHH
Q 013461 355 PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSA----AHSEADLVKACESL 430 (442)
Q Consensus 355 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~----~~t~eei~~~i~~l 430 (442)
.+++.+++.+... + .+ . +-+.+.|++.||.+....-|.......+++|||..+. ++.++|++++.+.|
T Consensus 328 Td~H~vlvd~~~~-~---~~---g-~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 328 TDNHQVLVDLRSF-G---ID---G-KEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp -SSSEEEEEGGGG-T---S----H-HHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred CCCCeEEEEeccc-c---cc---h-HHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 6788999887531 1 11 1 2244568889999987544433222235789998764 66788988877654
No 257
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.69 E-value=8.8e-15 Score=148.60 Aligned_cols=315 Identities=14% Similarity=0.104 Sum_probs=179.5
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHh-hh-C---C--C-cEEEEcchHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAK-FL-G---T--P-DSILYSYGLS 180 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~-~~-g---~--e-~~i~~~sG~~ 180 (442)
+++||++.+. +++..++.+.+ +.+++. |..++. ..|..++++++.+...+ .+ + . + ++++++++++
T Consensus 100 ~~~i~l~~g~-p~~~~~~~v~e-~~~~~~--~~~Y~~---~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~ 172 (527)
T PRK09275 100 RDAVSYVRDQ-LGFDADEFVYE-LVDGII--GDNYPV---PDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA 172 (527)
T ss_pred HHHHhhcCCC-CCCCCCHHHHH-HHHHHh--cCCCCC---CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 4678887765 58877777777 555553 222332 23444444444442222 11 2 1 2 5666777789
Q ss_pred HHHhhhhh-----hccCCCEEEeCCCchHHHHHHHHhcC--CeEEEecC-------CCHHHHHHHHHhhcc-------cc
Q 013461 181 TMFSAIPC-----FCKKGDLIVADEGVHWGIQNGLYLSR--STVVYFKH-------NDMDSLRNTLERVTA-------DN 239 (442)
Q Consensus 181 a~~~ai~a-----~~~~gd~Vi~~~~~h~s~~~~~~l~g--~~v~~~~~-------~d~~~Le~~l~~~~~-------~~ 239 (442)
++..++.+ ++++||.|++..|+|..+...+.+.+ .+++.++. .|.+++++++...++ .+
T Consensus 173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~N 252 (527)
T PRK09275 173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSN 252 (527)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcC
Confidence 98888875 68999999999999999988887775 44555531 145666665433221 11
Q ss_pred cc---------------c--c--cccccccCCCc-cc-cc---cCCCCCceeEEEEeccccccCCC---cEEEcCHH---
Q 013461 240 KR---------------S--N--SFGVLGRSGRG-LT-EH---CGVPVDKIDIVTAAMGHALATEG---GFCTGSAR--- 289 (442)
Q Consensus 240 ~~---------------a--~--~~g~~G~~g~g-~~-~~---~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~--- 289 (442)
+. + + ++-++-+.-.+ +. ++ .... .+..|++.||||++|++| ||++++++
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~-~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~ 331 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVL-PYNTILVYSFSKYFGATGWRLGVIALHEDNVF 331 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhC-CCCEEEEeehhhhccCcHhHHhhhhcCchhHH
Confidence 10 2 2 22222211110 00 11 1111 356899999999999888 99999876
Q ss_pred --hHHHH--------------------------------HhhCCceeccCCCcHHHHHHHH----HHHHHHhc-ChHHHH
Q 013461 290 --VVDHQ--------------------------------RLSSSGYVFSASLPPYLASAAI----TAIDVLEE-NPDLIT 330 (442)
Q Consensus 290 --~i~~l--------------------------------~~~~~~~~~s~s~~p~~aaaa~----aal~~l~~-~~~~~~ 330 (442)
+++.+ +... .+..++...|.+.++++ ++++..+. ..+.++
T Consensus 332 ~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~-~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~ 410 (527)
T PRK09275 332 DKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVA-LNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKD 410 (527)
T ss_pred HHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHH-HhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 33322 1211 12222223455444332 22332111 234677
Q ss_pred HHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCC---Cchh-----hHHHHHHHHHHHHHhCCEEEeeccCcccc
Q 013461 331 KLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTG---SMKN-----DLQLLEDIADWALKEDGVFVVTSKRSMLD 402 (442)
Q Consensus 331 ~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~---~~~~-----~~~~~~~i~~~~L~~~GV~v~~~~~~~~~ 402 (442)
.++++++.+.+.|. . ++....+..+.++++.+..-.. ..+. +.....+++.+++++.||.+.|+..+..+
T Consensus 411 ~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~ 488 (527)
T PRK09275 411 IIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGP 488 (527)
T ss_pred HHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCC
Confidence 88888888888772 2 2322223334455555532100 0000 00113578888888899999999876421
Q ss_pred cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 403 KCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 403 ~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
++.+|+|+.. .++++++++.++|++++.+...
T Consensus 489 ----~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 489 ----EWSVRVSLAN-LNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred ----CCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Confidence 3459999963 5789999999999999877554
No 258
>PLN02271 serine hydroxymethyltransferase
Probab=99.69 E-value=5.4e-15 Score=147.85 Aligned_cols=306 Identities=18% Similarity=0.170 Sum_probs=194.6
Q ss_pred eeEEEe-ecCCCCCCCCChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHH----HHHHhhhCCCc----E-EEEcc
Q 013461 109 KEVVNF-ASANYLGLIGHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCE----ARIAKFLGTPD----S-ILYSY 177 (442)
Q Consensus 109 ~~~id~-~s~~~l~~~~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le----~~lA~~~g~e~----~-i~~~s 177 (442)
++.|++ +|-||. +|.+.++.-..+.+ |..|+.|.|.+.| .+...++| ++..++||.+. + +-.-|
T Consensus 148 ~~~l~LIASEN~~----S~av~~algS~ltnkYaEG~pG~Ryy~G-~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~S 222 (586)
T PLN02271 148 FKGIELIASENFV----CRAVMEALGSHLTNKYSEGMPGARYYTG-NQYIDQIERLCCERALAAFGLDSEKWGVNVQPYS 222 (586)
T ss_pred hcCeeeccccccC----CHHHHHHhcCcccccCCCCCCCCcCCCC-ChhHHHHHHHHHHHHHHHhCCcccccccceeecc
Confidence 467887 888884 68899998887764 8888888885444 44444443 44456778554 2 44559
Q ss_pred hHHHHHhhhhhhccCCCEEEeCCCchHHHHH-H--------HHhcCC--eEEEecCC------CHHHHHHHHHhhccccc
Q 013461 178 GLSTMFSAIPCFCKKGDLIVADEGVHWGIQN-G--------LYLSRS--TVVYFKHN------DMDSLRNTLERVTADNK 240 (442)
Q Consensus 178 G~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~-~--------~~l~g~--~v~~~~~~------d~~~Le~~l~~~~~~~~ 240 (442)
|+.||..++.++++|||.|+..+..|+.-.. + +..+|. ++++|+.+ |++++++.+....++..
T Consensus 223 Gs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLI 302 (586)
T PLN02271 223 CTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKIL 302 (586)
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEE
Confidence 9999999999999999999986655544222 1 122332 23444443 78888885544333211
Q ss_pred c------------------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHH
Q 013461 241 R------------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSAR 289 (442)
Q Consensus 241 ~------------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~ 289 (442)
. +|..|.+.. +. +..+.+..|++++|.+|+| |..||+++.+++
T Consensus 303 I~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~---g~---~~sP~~~aDvvt~TTHKtLrGPrGG~I~~r~~ 376 (586)
T PLN02271 303 ICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAA---KE---CVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKG 376 (586)
T ss_pred EECchhccCcCCHHHHHHHHHHcCCEEEEECccccccccc---Cc---CCCCCcCCcEEEeCCcccCCCCCceEEEeccc
Confidence 1 455544421 11 1112245799999999999 778888887653
Q ss_pred --------------------hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhccCC
Q 013461 290 --------------------VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIH 347 (442)
Q Consensus 290 --------------------~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~~~~ 347 (442)
+.+.+.....+..-++..+.. .|+...+++... +..+..+++.+|.+.|.+.|.+.
T Consensus 377 ~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~-IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~- 454 (586)
T PLN02271 377 PKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNH-IAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR- 454 (586)
T ss_pred ccccccCCccccccccccHHHHHHhhcccCCccccChhHHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 333343333342223322222 333334555443 34678899999999999999886
Q ss_pred Cceeec-CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecC----CCCHHH
Q 013461 348 GLSIAS-NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSA----AHSEAD 422 (442)
Q Consensus 348 g~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~----~~t~ee 422 (442)
|+++.+ ..+++.+.+.+... + .+ ...+++.|++.||.+....-|.......|++|||..+. ++.++|
T Consensus 455 G~~vv~ggTdnHlvLvDl~~~-g---~~----G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d 526 (586)
T PLN02271 455 KCRLVTGGTDNHLLLWDLTTL-G---LT----GKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESD 526 (586)
T ss_pred CCeEeeCCCCcceeeecCccc-C---CC----HHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHH
Confidence 998754 45677888777432 1 01 13455678888999876554432222246789998765 556899
Q ss_pred HHHHHHHHHHHHH
Q 013461 423 LVKACESLKRISA 435 (442)
Q Consensus 423 i~~~i~~l~~~~~ 435 (442)
++++.+.|.++++
T Consensus 527 ~~~iA~~i~~~~~ 539 (586)
T PLN02271 527 FETIADFLLRAAQ 539 (586)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998876
No 259
>PRK14012 cysteine desulfurase; Provisional
Probab=99.69 E-value=1.1e-14 Score=145.98 Aligned_cols=301 Identities=15% Similarity=0.125 Sum_probs=176.7
Q ss_pred CChHHHHHHHHHHH---hcCCCCCc-cCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhh----ccCC
Q 013461 124 GHEKLLESCTSALE---KYGVGSCG-PRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCF----CKKG 193 (442)
Q Consensus 124 ~~p~v~ea~~~~l~---~~g~~~~~-~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~----~~~g 193 (442)
.++.+.+++.+++. .++..... +...+...+...++++.+|+++|.+ +++++++|++++..++.++ .++|
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~g 94 (404)
T PRK14012 15 VDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKG 94 (404)
T ss_pred CCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCC
Confidence 36789999988886 33332211 1111112366788999999999974 4778888889988887665 3789
Q ss_pred CEEEeCCCchHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhcccccc-------------------ccccc
Q 013461 194 DLIVADEGVHWGIQNGL---YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR-------------------SNSFG 246 (442)
Q Consensus 194 d~Vi~~~~~h~s~~~~~---~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~-------------------a~~~g 246 (442)
|.|++++..|.+..... ...|.+++.++.+ |++++++.+.+.+.-... ++..|
T Consensus 95 d~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g 174 (404)
T PRK14012 95 KHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERG 174 (404)
T ss_pred CEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcC
Confidence 99999999998875544 3358888877642 677888877653321100 22222
Q ss_pred --cccc--CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhh--CCc--eecc-CCCcHHHHHHHH
Q 013461 247 --VLGR--SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLS--SSG--YVFS-ASLPPYLASAAI 316 (442)
Q Consensus 247 --~~G~--~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~--~~~--~~~s-~s~~p~~aaaa~ 316 (442)
++-+ .+.|.. ..++...++|+++.|++|.+|..| |+++.+++....+... +.+ ..+. ++.+.....+..
T Consensus 175 ~~vivD~a~~~g~~-~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~ 253 (404)
T PRK14012 175 IIFHVDAAQSVGKV-PIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMG 253 (404)
T ss_pred CEEEEEcchhcCCc-ccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHH
Confidence 1111 111111 123333457999999999888655 7776665432222110 000 0011 122333333333
Q ss_pred HHHHHHhc-ChHHHHHHHHHHHHHHHhhccCCCceeecCC--C-CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE
Q 013461 317 TAIDVLEE-NPDLITKLKKNTAILRTGLSDIHGLSIASNP--E-SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF 392 (442)
Q Consensus 317 aal~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~--~-~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~ 392 (442)
++++.++. ..+..++.+++.+++.+.|++++++.+.+.. . .+..++.+.... . .++.. .|+ ++.
T Consensus 254 ~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~-~l~--~~~ 321 (404)
T PRK14012 254 EAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE----G-----ESLIM-ALK--DLA 321 (404)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC----H-----HHHHH-hCC--CeE
Confidence 56665543 2446678888999999999887777664321 1 233333332110 1 13444 343 566
Q ss_pred EeeccCcccc--------------cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 393 VVTSKRSMLD--------------KCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 393 v~~~~~~~~~--------------~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
|..+..+... ....+..||++++..+|++|+|+++++|+++++..
T Consensus 322 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 322 VSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred EEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 6554332110 00012459999999999999999999999987654
No 260
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.69 E-value=6.1e-15 Score=147.45 Aligned_cols=289 Identities=12% Similarity=0.095 Sum_probs=171.0
Q ss_pred eEEEeecCCCC--CCC-C-ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----C----CCcE--EEE
Q 013461 110 EVVNFASANYL--GLI-G-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----G----TPDS--ILY 175 (442)
Q Consensus 110 ~~id~~s~~~l--~~~-~-~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g----~e~~--i~~ 175 (442)
.+|||+.+.+. +.. . .+.+.+++.+.++.... .++....|. .+|++.+|+++ + .++. +++
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~--~~Y~~~~G~----~~lR~aia~~~~~~~~~~~~~~~i~v~iT 100 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETT--KNYLPIEGL----AAYRQAVQELLFGADSPALAAGRVATVQT 100 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccC--CCcCCCCCC----HHHHHHHHHHhcCCCCcccccCeEEEEec
Confidence 56898776431 111 1 36778887776643211 111122333 56666666654 2 2233 556
Q ss_pred cchHHHHHhhhhhh--ccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhcccccc-----
Q 013461 176 SYGLSTMFSAIPCF--CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKR----- 241 (442)
Q Consensus 176 ~sG~~a~~~ai~a~--~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~~~~----- 241 (442)
+++++++..++.++ +++||.|++++++|..+...++..|++++.++. .|++++++.++........
T Consensus 101 ~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~ 180 (396)
T PRK09257 101 PGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGC 180 (396)
T ss_pred CCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCC
Confidence 66679998888666 489999999999999999999999999988864 1567888777643221111
Q ss_pred ----------------------cccccccccCC-Cccc--------cccCCC-CCceeEEEEeccccccCCC---cEEE-
Q 013461 242 ----------------------SNSFGVLGRSG-RGLT--------EHCGVP-VDKIDIVTAAMGHALATEG---GFCT- 285 (442)
Q Consensus 242 ----------------------a~~~g~~G~~g-~g~~--------~~~~v~-~~~~diii~S~sK~lg~~G---G~v~- 285 (442)
.|++-++-+.- ..+. ....+. ..+..|+++||||++++.| ||++
T Consensus 181 p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 181 CHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 23332221110 0000 000011 1235789999999998766 9986
Q ss_pred --cCHHh----HHHHHhhCCceeccCCCcHHHHHHHHHHHHH-------HhcChHHHHHHHHHHHHHHHhhccCC---Cc
Q 013461 286 --GSARV----VDHQRLSSSGYVFSASLPPYLASAAITAIDV-------LEENPDLITKLKKNTAILRTGLSDIH---GL 349 (442)
Q Consensus 286 --g~~~~----i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~-------l~~~~~~~~~l~~~~~~l~~~L~~~~---g~ 349 (442)
.+++. +..++..... .++ +.+++.+.++.+.++. .+...+.+++++++++.+.+.|++.. ++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~ 338 (396)
T PRK09257 261 VAEDAEEADRVLSQLKATIRT-NYS-NPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDF 338 (396)
T ss_pred EeCCHHHHHHHHHHHHHHhhh-hcC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 34443 3333222111 112 1244444444444432 11223467888999999999998762 25
Q ss_pred eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHH
Q 013461 350 SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACES 429 (442)
Q Consensus 350 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~ 429 (442)
.+..+..+.++|+.+. + +++.++++++||++.+ . .||+++. .++++|++++++
T Consensus 339 ~~~~p~gg~~~w~~l~--------~-----~~~~~l~~~~~V~~~p------------~-~ri~~~~-~~~~~i~~~~~~ 391 (396)
T PRK09257 339 DFIARQRGMFSYSGLT--------P-----EQVDRLREEFGVYAVG------------S-GRINVAG-LNESNIDYVAEA 391 (396)
T ss_pred ccccccceEEEecCCC--------H-----HHHHHHHHcCCEEEcC------------C-CeEEEee-CCHHHHHHHHHH
Confidence 5544445555665541 1 3455567788998754 1 3999965 689999999999
Q ss_pred HHHH
Q 013461 430 LKRI 433 (442)
Q Consensus 430 l~~~ 433 (442)
|+++
T Consensus 392 i~~~ 395 (396)
T PRK09257 392 IAAV 395 (396)
T ss_pred HHhh
Confidence 9875
No 261
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=1.3e-14 Score=144.33 Aligned_cols=192 Identities=15% Similarity=0.133 Sum_probs=137.2
Q ss_pred CcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHH
Q 013461 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDS 227 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~ 227 (442)
..+.+.++|+++|++.|.+.++++++|++|+..++.+++++||.|+++.+.|+++.. .+...|+++.+++..|+++
T Consensus 62 ~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~ 141 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQ 141 (398)
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHH
Confidence 347789999999999999999999999999999999999999999999999987543 3456788888888888999
Q ss_pred HHHHHHhhccccc-------c--------------cccccccccCCCc-cccccCCCCCceeEEEEeccccccC----CC
Q 013461 228 LRNTLERVTADNK-------R--------------SNSFGVLGRSGRG-LTEHCGVPVDKIDIVTAAMGHALAT----EG 281 (442)
Q Consensus 228 Le~~l~~~~~~~~-------~--------------a~~~g~~G~~g~g-~~~~~~v~~~~~diii~S~sK~lg~----~G 281 (442)
+++.+++.++-.. . .++.-++-+...+ ......+ ....|+++.|++|.+|. .|
T Consensus 142 l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~~~Divv~S~sK~l~g~~~~~g 220 (398)
T PRK08249 142 IEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPL-ALGADLVIHSATKFLSGHADALG 220 (398)
T ss_pred HHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCch-hhCCCEEeccCceecCCCCCceE
Confidence 9888765332110 0 2222222111111 0000011 23578999999999974 36
Q ss_pred cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 282 GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
|++++++++++.++.... ..+.+++|..++.++..++.+. .++++.+++.+.+.+.|++.|.+
T Consensus 221 G~vv~~~~l~~~l~~~~~--~~g~~~s~~~a~l~l~~l~tL~---~R~~~~~~na~~la~~L~~~p~v 283 (398)
T PRK08249 221 GVVCGSKELMEQVYHYRE--INGATMDPMSAYLILRGMKTLK---LRVRQQQESAMALAKYLQTHPKV 283 (398)
T ss_pred EEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhCcchHH---HHHHHHHHHHHHHHHHHHcCCCe
Confidence 899999999888765432 2455678888887777777663 35677778888888888876443
No 262
>PRK08354 putative aminotransferase; Provisional
Probab=99.67 E-value=7.4e-14 Score=134.99 Aligned_cols=273 Identities=14% Similarity=0.124 Sum_probs=161.9
Q ss_pred eeEEEeecC-CCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhh
Q 013461 109 KEVVNFASA-NYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (442)
Q Consensus 109 ~~~id~~s~-~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~ 187 (442)
.++|||+.+ |++ ++|.+++++.+++.... .+ + ....+++.+|+++|. ++++++++++++..++.
T Consensus 8 ~~~i~l~~~~np~---~p~~~~~a~~~~~~~~~-~y---p-------~~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~ 72 (311)
T PRK08354 8 EGLIDFSASVNPY---PPEWLDEMFERAKEISG-RY---T-------YYEWLEEEFSKLFGE-PIVITAGITEALYLIGI 72 (311)
T ss_pred cceeEecCCCCCC---CCHHHHHHHHHHHHHhh-cC---C-------ChHHHHHHHHHHHCC-CEEECCCHHHHHHHHHH
Confidence 468999877 554 25788999988765421 11 1 135789999999984 56666666788877664
Q ss_pred hhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhc------ccccc-----------------ccc
Q 013461 188 CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNTLERVT------ADNKR-----------------SNS 244 (442)
Q Consensus 188 a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~l~~~~------~~~~~-----------------a~~ 244 (442)
+..+||.|+++.++|..+...++..|.+++.++ .|++.+++.+++.. +.++. .|+
T Consensus 73 -~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~ 150 (311)
T PRK08354 73 -LALRDRKVIIPRHTYGEYERVARFFAARIIKGP-NDPEKLEELVERNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN 150 (311)
T ss_pred -hhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC-CCHHHHHHhhcCCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence 445899999999999999999999999988764 46778877665211 01110 122
Q ss_pred ccccccC-CCccc-cccCCCCCceeEEEEeccccccCCC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHH
Q 013461 245 FGVLGRS-GRGLT-EHCGVPVDKIDIVTAAMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAI 319 (442)
Q Consensus 245 ~g~~G~~-g~g~~-~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal 319 (442)
.-++-+. ...+. +.... +.+..|+++||||++|++| ||+++ .++.++.....+ +.++...+++.+.+
T Consensus 151 ~~li~De~y~~f~~~~~~~-~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~----~~~~~~~~~~~~~~ 222 (311)
T PRK08354 151 ALLILDEAFIDFVKKPESP-EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPW----SIGSTGYAFLEFLI 222 (311)
T ss_pred cEEEEeCcchhcccccccc-CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCc----cCCHHHHHHHHHHH
Confidence 2222111 11111 00111 1356799999999999877 99998 455555433222 22333333332332
Q ss_pred HHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCc
Q 013461 320 DVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRS 399 (442)
Q Consensus 320 ~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~ 399 (442)
+ .. .++++++.+++++..+.+.+.... ++.+.++++.+.+ ..++++. |.++||.+.++..+
T Consensus 223 ~---~~---~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~-----------~~~~~~~-l~~~gv~v~~g~~f 283 (311)
T PRK08354 223 E---DD---FEHLRKTMPLIWREKERFEKALYV-KSDANFFIKDVGD-----------AEKFVEF-LKRNGILVRDCTSF 283 (311)
T ss_pred H---hH---HHHHHHHHHHHHHHHHHHHHhcCC-CCCCcEEEEECCC-----------HHHHHHH-HHHCCeEEEecccC
Confidence 2 11 122222222222222221111111 3466666654421 2356765 45679999998765
Q ss_pred ccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 400 MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 400 ~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.. ++.+||+++ +.++.++++++|+++
T Consensus 284 ~~-----~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 284 GL-----PGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred CC-----CCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 32 456999997 667888888888764
No 263
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.67 E-value=3.8e-14 Score=140.56 Aligned_cols=289 Identities=11% Similarity=0.128 Sum_probs=177.7
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh-ccCCCEEEeCCCchH
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~-~~~gd~Vi~~~~~h~ 204 (442)
++-.+++.+.++. |. .+|..+.+.++|+.+++++|.++++++++|++|+..++.++ .++||.|+++.++|.
T Consensus 11 ~~~~~~~~~~l~~-~~-------~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~ 82 (375)
T PRK11706 11 GTELDYIQQAMSS-GK-------LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (375)
T ss_pred HHHHHHHHHHHHc-CC-------ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcH
Confidence 4446677777654 21 23456778999999999999999999999999998877655 799999999999999
Q ss_pred HHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhcccccc------------------cccccccccCCCccccccC
Q 013461 205 GIQNGLYLSRSTVVYFKH------NDMDSLRNTLERVTADNKR------------------SNSFGVLGRSGRGLTEHCG 260 (442)
Q Consensus 205 s~~~~~~l~g~~v~~~~~------~d~~~Le~~l~~~~~~~~~------------------a~~~g~~G~~g~g~~~~~~ 260 (442)
++..++...|++++.++. .|++++++.+.+.++.... .|++-++-+...+....++
T Consensus 83 ~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~ 162 (375)
T PRK11706 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYK 162 (375)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeCCCCCccCHHHHHHHHHHcCCEEEEECccccccccC
Confidence 999999999999998863 3577888776542221100 1111111111000000010
Q ss_pred CCC--CceeEEEEecc--ccccC--CCcEEEcCHHhHHHHHhhCC-c------------------eeccCCCcHHHHHHH
Q 013461 261 VPV--DKIDIVTAAMG--HALAT--EGGFCTGSARVVDHQRLSSS-G------------------YVFSASLPPYLASAA 315 (442)
Q Consensus 261 v~~--~~~diii~S~s--K~lg~--~GG~v~g~~~~i~~l~~~~~-~------------------~~~s~s~~p~~aaaa 315 (442)
-.+ .-.|+.+.||+ |.++. +|++++.++++.+.++.... + ..++.-++.+.++.+
T Consensus 163 ~~~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~ 242 (375)
T PRK11706 163 GRALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYL 242 (375)
T ss_pred CeeeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHH
Confidence 000 01255565655 99953 34567777888775542210 0 012223467777777
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHhhccCC--C-ceeec-CC----CCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 316 ITAIDVLEENPDLITKLKKNTAILRTGLSDIH--G-LSIAS-NP----ESPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 316 ~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~--g-~~~~~-~~----~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
++.++.+++ ..++-+++.+++++.|.+++ + +.+.. ++ ..+++++.+.... ...++.+ .|.
T Consensus 243 ~~ql~~l~~---~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~r~~l~~-~L~ 310 (375)
T PRK11706 243 WAQLEAADR---INQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLE--------DRSALIN-FLK 310 (375)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcC--------CHHHHHH-HHH
Confidence 777777643 55666677788888887764 2 33221 11 1335566553210 1225666 466
Q ss_pred hCCEEEeeccCccc-----c-----cCCCCC-------ceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSML-----D-----KCRLPV-------GIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 388 ~~GV~v~~~~~~~~-----~-----~~~~~~-------~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
++||.++....|.. . ...+|. .+.+.++..+|++|++.++++|++++
T Consensus 311 ~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 311 EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 77998765432211 0 111232 28888888899999999999998764
No 264
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.67 E-value=2.3e-14 Score=142.47 Aligned_cols=190 Identities=14% Similarity=0.121 Sum_probs=131.6
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~L 228 (442)
.+.+.++|+++|+++|.+.++++++|++|+..++.+++++||.|+++.+.|+++.. .+...|.++++++.+|++++
T Consensus 60 ~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 139 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAW 139 (390)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 46688999999999999999999999999999999999999999999998877554 34567899999998889999
Q ss_pred HHHHHhhcccccc---------------------cccccccccCCC--ccccccCCCCCceeEEEEeccccccCC----C
Q 013461 229 RNTLERVTADNKR---------------------SNSFGVLGRSGR--GLTEHCGVPVDKIDIVTAAMGHALATE----G 281 (442)
Q Consensus 229 e~~l~~~~~~~~~---------------------a~~~g~~G~~g~--g~~~~~~v~~~~~diii~S~sK~lg~~----G 281 (442)
++.++..++-... .|++-++-+.-. +.. ...+ ..+.|+++.|++|.++.. |
T Consensus 140 ~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~-~~pl-~~g~Divv~S~sK~~~g~g~~~G 217 (390)
T PRK08133 140 RAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL-QQPL-KLGADVVIHSATKYLDGQGRVLG 217 (390)
T ss_pred HHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccccc-CCch-hhCCcEEEeecceeecCCcceEe
Confidence 8887653321110 222222211111 110 0011 124689999999999753 5
Q ss_pred cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 282 GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
|+++++++.++.+..... ..+..++|+.+..++..++.+ ..++++..++...+.+.|++.+++
T Consensus 218 G~vv~~~~~~~~~~~~~~--~~g~~~~~~~a~~~l~gl~tl---~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 218 GAVVGSKELMEEVFGFLR--TAGPTLSPFNAWVFLKGLETL---SLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred EEEEcCHHHHHHHHHHHH--HhCCCCCHHHHHHHHcccchH---HHHHHHHHHHHHHHHHHHHhCCCe
Confidence 899999887766543211 233456777766655555433 446677778888888888876554
No 265
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.67 E-value=1.9e-14 Score=142.02 Aligned_cols=265 Identities=15% Similarity=0.126 Sum_probs=166.4
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~~~d~~~L 228 (442)
.+.+..||++||++.|.+.+++++||++|+..++.+++++||.|++.++.|+++... +...|.++..++.++.+++
T Consensus 49 nPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l 128 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDI 128 (377)
T ss_pred CccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 356789999999999999999999999999999999999999999888877765432 3445777777766555677
Q ss_pred HHHHHhhcccccc-------------------c--ccccccccC--CCccccccCCCCCceeEEEEeccccccC----CC
Q 013461 229 RNTLERVTADNKR-------------------S--NSFGVLGRS--GRGLTEHCGVPVDKIDIVTAAMGHALAT----EG 281 (442)
Q Consensus 229 e~~l~~~~~~~~~-------------------a--~~~g~~G~~--g~g~~~~~~v~~~~~diii~S~sK~lg~----~G 281 (442)
++.+++.++-... + ++.-++-+. +.|.. +.....++|+++.|++|.+|. .|
T Consensus 129 ~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~--~~pl~~gaDivv~S~tK~l~G~~d~~g 206 (377)
T TIGR01324 129 ATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLL--FKPLEHGVDISIQAGTKYLVGHSDIMI 206 (377)
T ss_pred HHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc--cCccccCceEEEecCceeccCCCCceE
Confidence 7766543321100 2 222121111 11111 111124679999999999963 36
Q ss_pred cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-eec-------
Q 013461 282 GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IAS------- 353 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~------- 353 (442)
|+++++++.++.++.. .+.+++.++|..+...+..++.+ +.++++.+++...+.+.|.+.|.+. +.-
T Consensus 207 G~v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~rgl~tl---~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p 281 (377)
T TIGR01324 207 GTVVANARTWDQLREH--SYLMGQMVDADDAYTTLRGLRTL---GVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCP 281 (377)
T ss_pred EEEEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHHhhhhhH---HHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCc
Confidence 8999999888777643 44567788898877776666655 3467777778777777777654331 110
Q ss_pred ---------CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc--------------ccCCCCCce
Q 013461 354 ---------NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML--------------DKCRLPVGI 410 (442)
Q Consensus 354 ---------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~--------------~~~~~~~~i 410 (442)
...+.++.+.++.. ......++++. |+-.++.++-+...+. .....+.-|
T Consensus 282 ~~~~~~~~~~~~g~~~s~~l~~~------~~~~~~~~~~~-l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~li 354 (377)
T TIGR01324 282 GHEFWKRDFSGSSGLFSFVLQRL------TQKQVHAFLDH-LQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLI 354 (377)
T ss_pred cHHHHHHhccCCCceEEEEECCC------CHHHHHHHHHh-CCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEE
Confidence 02366888888421 11223456663 5544444433322111 001112349
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 411 RLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 411 Ri~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
|+|+.. ||.+.+++-|+++++
T Consensus 355 R~svGl----E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 355 RVHIGL----ENVDDLKADLKAGFE 375 (377)
T ss_pred EEEeCC----CCHHHHHHHHHHHHh
Confidence 999987 556666666666654
No 266
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.66 E-value=1.3e-13 Score=129.69 Aligned_cols=307 Identities=17% Similarity=0.165 Sum_probs=209.3
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC---CcEEEEcchH-HHHHh
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT---PDSILYSYGL-STMFS 184 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~---e~~i~~~sG~-~a~~~ 184 (442)
.++|-|--.+ ..+...|+|++|+.+.++..-.|+ + +++.++...+....++.++. ++.++++.|- -++..
T Consensus 25 ~DvlPmWVAD-MDf~~pp~i~~Al~~rvdhGvfGY---~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~ 98 (388)
T COG1168 25 EDVLPMWVAD-MDFPTPPEIIEALRERVDHGVFGY---P--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISL 98 (388)
T ss_pred CCcceeeeec-ccCCCCHHHHHHHHHHHhcCCCCC---C--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHH
Confidence 4566664444 356678999999999998621333 2 45566777777777777763 4667777665 88999
Q ss_pred hhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhccc--------ccc-------
Q 013461 185 AIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--------NDMDSLRNTLERVTAD--------NKR------- 241 (442)
Q Consensus 185 ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~--------~d~~~Le~~l~~~~~~--------~~~------- 241 (442)
+|++++++||-|++..|+|.+....+...+-+++..|. .|.++||+.+..-..+ ++.
T Consensus 99 ~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~e 178 (388)
T COG1168 99 AIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKE 178 (388)
T ss_pred HHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHH
Confidence 99999999999999999999999999999999887763 2889999888764311 111
Q ss_pred ----------ccccccccc--------CC-CccccccCCCC--CceeEEEEeccccccCCC---cE-EEcCHHhHHH-HH
Q 013461 242 ----------SNSFGVLGR--------SG-RGLTEHCGVPV--DKIDIVTAAMGHALATEG---GF-CTGSARVVDH-QR 295 (442)
Q Consensus 242 ----------a~~~g~~G~--------~g-~g~~~~~~v~~--~~~diii~S~sK~lg~~G---G~-v~g~~~~i~~-l~ 295 (442)
.|+.-++-+ .| ... ....+.+ .+..|++.|-||+|+..| ++ ++.++++.++ ++
T Consensus 179 eL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~-~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~ 257 (388)
T COG1168 179 ELRKIAELCLRHGVRVISDEIHADLVLGGHKHI-PFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLK 257 (388)
T ss_pred HHHHHHHHHHHcCCEEEeecccccccccCCCcc-chhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHH
Confidence 444433321 11 111 1122322 356788899999998665 44 5566665333 33
Q ss_pred hhCCceeccCCCcHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHhhcc-CCCceeecCCCCCEEEEEecCCCCCchh
Q 013461 296 LSSSGYVFSASLPPYLASAAITAIDVLEE-NPDLITKLKKNTAILRTGLSD-IHGLSIASNPESPIVFLILEKSTGSMKN 373 (442)
Q Consensus 296 ~~~~~~~~s~s~~p~~aaaa~aal~~l~~-~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~~~~~i~~~~~~~~~~~~~~ 373 (442)
... .......+.+...|..+|.+.-+. .+++.+-+++|.+++.+.|++ +|++++..+.++...|+.+..-. .
T Consensus 258 ~l~--~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~----l 331 (388)
T COG1168 258 RLK--RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELG----L 331 (388)
T ss_pred HHH--HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccC----C
Confidence 222 122334567777777777765543 256888899999999999976 48999987777888898875321 1
Q ss_pred hHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 374 DLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 374 ~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
+. .++.+.++++.+|.+.++..+.... ...+|+.+. .+.+-+++++++|+.+++.
T Consensus 332 ~d---~~l~~~ll~~akVal~~G~~FG~~g---~gf~RlN~a--cpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 332 DD---SELAEFLLEEAKVALSPGSTFGEEG---SGFVRLNFA--CPRAILEEALERLKRALKK 386 (388)
T ss_pred Ch---HHHHHHHHHhhcEeccCCCccCcCC---CceEEEecC--CCHHHHHHHHHHHHHHHhc
Confidence 11 2455667788899999987765321 133899887 4889999999999877653
No 267
>PLN02651 cysteine desulfurase
Probab=99.66 E-value=1.9e-14 Score=142.29 Aligned_cols=287 Identities=17% Similarity=0.110 Sum_probs=175.7
Q ss_pred ChHHHHHHHHHHHh-cCCCCC-ccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhh----hccCCCEE
Q 013461 125 HEKLLESCTSALEK-YGVGSC-GPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPC----FCKKGDLI 196 (442)
Q Consensus 125 ~p~v~ea~~~~l~~-~g~~~~-~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a----~~~~gd~V 196 (442)
++.+.+++.+.+.. ++.... ++.......+..+++++.+++++|.+ +.+++++|++++..++.+ +.++||.|
T Consensus 12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~v 91 (364)
T PLN02651 12 DPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHV 91 (364)
T ss_pred CHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEE
Confidence 57899999888865 443322 11111223566789999999999964 456667778887666544 35789999
Q ss_pred EeCCCchHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhcccccc-------------------ccccc--c
Q 013461 197 VADEGVHWGIQNGL---YLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR-------------------SNSFG--V 247 (442)
Q Consensus 197 i~~~~~h~s~~~~~---~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~-------------------a~~~g--~ 247 (442)
++....|+++...+ ...|.+++.++.+ |++++++.+++.+.-... +|..| +
T Consensus 92 l~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~ 171 (364)
T PLN02651 92 ITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLF 171 (364)
T ss_pred EEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEE
Confidence 99999998865443 3457777777642 677788777543221110 22222 1
Q ss_pred c--ccCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCc----e-eccCCCcHHHHHHHHHHH
Q 013461 248 L--GRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSG----Y-VFSASLPPYLASAAITAI 319 (442)
Q Consensus 248 ~--G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~----~-~~s~s~~p~~aaaa~aal 319 (442)
+ +.++.|.. .++++..++|+++.|.+|.+|..| |+++.+++..+.+.....+ . ...++.+...+.+..+++
T Consensus 172 ~vD~a~~~g~~-~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al 250 (364)
T PLN02651 172 HTDAAQAVGKI-PVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAAC 250 (364)
T ss_pred EEEcchhhCCc-ccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHH
Confidence 1 11122211 133444468999999999766555 8888777655443221110 0 112334445555666788
Q ss_pred HHHhc-ChHHHHHHHHHHHHHHHhhcc-CCCceeecC--CC---CCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE
Q 013461 320 DVLEE-NPDLITKLKKNTAILRTGLSD-IHGLSIASN--PE---SPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF 392 (442)
Q Consensus 320 ~~l~~-~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~--~~---~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~ 392 (442)
+.+.+ .+.+.++.+++.+++.+.|.+ ++|+++.++ +. .+++.+.+... + ..+++.. |.+ |.
T Consensus 251 ~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~------~---~~~~~~~-L~~--i~ 318 (364)
T PLN02651 251 ELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYV------E---GESLLMG-LKE--VA 318 (364)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCC------C---HHHHHHH-hCC--EE
Confidence 87764 245677888899999999875 578888763 11 34777776421 1 2256654 543 88
Q ss_pred EeeccCcccc---------cCC-----CCCceEEEecCCCCHHHHH
Q 013461 393 VVTSKRSMLD---------KCR-----LPVGIRLFVSAAHSEADLV 424 (442)
Q Consensus 393 v~~~~~~~~~---------~~~-----~~~~iRi~~~~~~t~eei~ 424 (442)
++.+..+... ... ....+|+|++..+|++|||
T Consensus 319 v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 319 VSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 8766543211 000 1245999999999999985
No 268
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.66 E-value=9.6e-14 Score=137.77 Aligned_cols=290 Identities=16% Similarity=0.164 Sum_probs=176.1
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh-ccCCCEEEeCCCchH
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~-~~~gd~Vi~~~~~h~ 204 (442)
++-++++.+.++. |..+. .+...+||+++|+++|.+.++++++|++|+..++.++ +++||.|+++.++|.
T Consensus 14 ~~e~~~~~~~l~~-~~~~~--------g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~ 84 (379)
T PRK11658 14 DEELAAVKEVLRS-GWITT--------GPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWV 84 (379)
T ss_pred HHHHHHHHHHHHc-CCccC--------CHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHH
Confidence 5667778887765 22111 2446899999999999999999999999999999998 799999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccccc------------------cccccccccC--CCccccc
Q 013461 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKR------------------SNSFGVLGRS--GRGLTEH 258 (442)
Q Consensus 205 s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~------------------a~~~g~~G~~--g~g~~~~ 258 (442)
++...+...|++++.++.+ |++++++.+.+.++.... .|++-++-+. ..|.. +
T Consensus 85 ~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~-~ 163 (379)
T PRK11658 85 STLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTY-Y 163 (379)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCe-E
Confidence 9999899999999888642 677787776543221100 1222111111 11111 1
Q ss_pred cC--CCCCceeEEEEecccccc-CCCcEEEc-CHHhHHHHHhhC-Cce---------------------eccCCCcHHHH
Q 013461 259 CG--VPVDKIDIVTAAMGHALA-TEGGFCTG-SARVVDHQRLSS-SGY---------------------VFSASLPPYLA 312 (442)
Q Consensus 259 ~~--v~~~~~diii~S~sK~lg-~~GG~v~g-~~~~i~~l~~~~-~~~---------------------~~s~s~~p~~a 312 (442)
.| +.....++...+-+|.+. ..||+++. ++++.+.++... .+. .+...++.+.+
T Consensus 164 ~~~~~g~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~A 243 (379)
T PRK11658 164 KGRHIGARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINA 243 (379)
T ss_pred CCeecCCCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHH
Confidence 11 111122443433457774 35787776 477776654311 010 01223566777
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecCCC----C-CEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 313 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASNPE----S-PIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 313 aaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
|.++..++.++ +..++-+++.+++.+.|++++...+..+.. + .++.+.+....... ...++.+. |+
T Consensus 244 Al~~~ql~~l~---~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~r~~~~~~-L~ 314 (379)
T PRK11658 244 AIALVQLAKLE---ALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGI-----SRDALMEA-LK 314 (379)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccC-----CHHHHHHH-HH
Confidence 77777776554 466777788888899998774332221111 1 23334442110000 12356664 66
Q ss_pred hCCEEEeeccCccc---------ccCCCCC-------ceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSML---------DKCRLPV-------GIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 388 ~~GV~v~~~~~~~~---------~~~~~~~-------~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
++||.+.....+.. ....+|. .|.+.++..+|++|+++++++|++++
T Consensus 315 ~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 315 ERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred HCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 77987664332211 0111232 28888888999999999999999865
No 269
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.65 E-value=1.2e-13 Score=136.56 Aligned_cols=289 Identities=15% Similarity=0.162 Sum_probs=175.9
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh-ccCCCEEEeCCCchH
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF-CKKGDLIVADEGVHW 204 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~-~~~gd~Vi~~~~~h~ 204 (442)
++.++++.+++.. |. .+|..+...++|+.+++++|.++++++++|++++..++.++ .++||.|+++.++|.
T Consensus 11 ~~e~~a~~~~~~~-~~-------~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~ 82 (376)
T TIGR02379 11 GQELEYIAEAISE-GK-------LSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (376)
T ss_pred HHHHHHHHHHHHc-CC-------ccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 5667888888765 22 22334678999999999999999999999999999888887 899999999999999
Q ss_pred HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccccc------------------cccccccccCCCcccc-cc
Q 013461 205 GIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKR------------------SNSFGVLGRSGRGLTE-HC 259 (442)
Q Consensus 205 s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~------------------a~~~g~~G~~g~g~~~-~~ 259 (442)
++...+...|++++.++.+ |++++++.++..++.... .|++-++-+.-.+... +.
T Consensus 83 ~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Iip~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~ 162 (376)
T TIGR02379 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIVPVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYK 162 (376)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEEeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccC
Confidence 9999998999999988743 566677766542211100 2222222111111100 11
Q ss_pred CCCC-CceeEEEEecc--cccc--CCCcEEEc-CHHhHHHHHhhCC-c------------------eeccCCCcHHHHHH
Q 013461 260 GVPV-DKIDIVTAAMG--HALA--TEGGFCTG-SARVVDHQRLSSS-G------------------YVFSASLPPYLASA 314 (442)
Q Consensus 260 ~v~~-~~~diii~S~s--K~lg--~~GG~v~g-~~~~i~~l~~~~~-~------------------~~~s~s~~p~~aaa 314 (442)
+... .-.|+.+.||+ |.+. ..||+++. ++++.+.++.... + ..++.-++.+.++.
T Consensus 163 ~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~ 242 (376)
T TIGR02379 163 GRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAY 242 (376)
T ss_pred CcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHH
Confidence 1110 11255555553 6664 35787655 5788777653211 0 11233356778888
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCC--C-ceeec--CCC---CCEEEEEecCCCCCchhhHHHHHHHHHHHH
Q 013461 315 AITAIDVLEENPDLITKLKKNTAILRTGLSDIH--G-LSIAS--NPE---SPIVFLILEKSTGSMKNDLQLLEDIADWAL 386 (442)
Q Consensus 315 a~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~--g-~~~~~--~~~---~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L 386 (442)
+++.|+.+++ ..++-+++.+++.+.|.+++ + ..+.. +.. ..++++.+... . + -.++.+ .|
T Consensus 243 g~~qL~~l~~---~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~--~---r~~l~~-~L 310 (376)
T TIGR02379 243 LWAQLEQADR---INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE---D--D---RNELIK-YL 310 (376)
T ss_pred HHHHHHHhHH---HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc---C--C---HHHHHH-HH
Confidence 8788877754 44444556666667766542 2 22211 111 12344444321 0 1 125666 47
Q ss_pred HhCCEEEeeccCcccc----------cCCCCC-------ceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 387 KEDGVFVVTSKRSMLD----------KCRLPV-------GIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 387 ~~~GV~v~~~~~~~~~----------~~~~~~-------~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
+++||.+++...|... ....|. .|.|.++..+|++|+++++++|++++
T Consensus 311 ~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 311 KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 7789987754322110 011121 38999999999999999999998764
No 270
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.64 E-value=6.7e-14 Score=142.03 Aligned_cols=316 Identities=14% Similarity=0.112 Sum_probs=173.6
Q ss_pred eeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHH-HHHhhhC----CC---cEEEEcchHH
Q 013461 109 KEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEA-RIAKFLG----TP---DSILYSYGLS 180 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~-~lA~~~g----~e---~~i~~~sG~~ 180 (442)
+++||++.+. +++.. |++++++.+.+. |..++.| .|..+..+++.+ .+.+.++ .+ +++++++|++
T Consensus 94 ~~~i~l~~g~-p~~~~-~~~~~~~~~~~~--~~~Y~~p---~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 94 RDIISYVIDQ-LGFDP-DAFLYEMCDGII--GDNYPVP---DRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHHhhcCCC-CCCCC-CHHHHHHHHHhh--cCCCCCC---CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 3567777665 46664 566677777653 2222211 233333433332 2233222 12 5666777789
Q ss_pred HHHhhhhh-----hccCCCEEEeCCCchHHHHHHHHhc--CCeEEEecCC------------CHHHHHHHHHhhcc----
Q 013461 181 TMFSAIPC-----FCKKGDLIVADEGVHWGIQNGLYLS--RSTVVYFKHN------------DMDSLRNTLERVTA---- 237 (442)
Q Consensus 181 a~~~ai~a-----~~~~gd~Vi~~~~~h~s~~~~~~l~--g~~v~~~~~~------------d~~~Le~~l~~~~~---- 237 (442)
++..++.+ +++|||.|++..|+|..+...+.+. +.+++.++.. |.+++++++...++
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l 246 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFV 246 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEE
Confidence 98888776 7899999999999999988887776 5666655421 34566654432111
Q ss_pred ---cccc-----------------cc--cccccccCCCc-cc-cc---cCCCCCceeEEEEeccccccCCC---cEEEcC
Q 013461 238 ---DNKR-----------------SN--SFGVLGRSGRG-LT-EH---CGVPVDKIDIVTAAMGHALATEG---GFCTGS 287 (442)
Q Consensus 238 ---~~~~-----------------a~--~~g~~G~~g~g-~~-~~---~~v~~~~~diii~S~sK~lg~~G---G~v~g~ 287 (442)
.++. .| .+-++-+.-.+ +. ++ .... .+..|++.||||++|++| ||++++
T Consensus 247 ~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~-~~~vI~v~SfSK~fg~~G~RlG~i~~~ 325 (521)
T TIGR03801 247 VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAEL-PYNTIGVYSFSKYFGATGWRLGTIALH 325 (521)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhC-CCCEEEEEcchhhccCchhhhhhhhcC
Confidence 1110 22 22222221111 00 00 1111 245799999999999887 999987
Q ss_pred HH-----hHH--------HH------------------------HhhCCceeccCCCcHHHH--H--HHHHHHHHHhc-C
Q 013461 288 AR-----VVD--------HQ------------------------RLSSSGYVFSASLPPYLA--S--AAITAIDVLEE-N 325 (442)
Q Consensus 288 ~~-----~i~--------~l------------------------~~~~~~~~~s~s~~p~~a--a--aa~aal~~l~~-~ 325 (442)
++ ++. .+ +......+.+.+ .|.+. + ++.+.++..+. .
T Consensus 326 ~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s-~p~Q~q~al~a~~all~~~~~y~ 404 (521)
T TIGR03801 326 KDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLS-TPQQVQMALFSLFALMDKENAYK 404 (521)
T ss_pred chHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCC-cHHHHHHHHHHHHHHhccchhHH
Confidence 64 221 11 111111111222 23332 2 22233332111 2
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCC---Cchh-----hHHHHHHHHHHHHHhCCEEEeecc
Q 013461 326 PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTG---SMKN-----DLQLLEDIADWALKEDGVFVVTSK 397 (442)
Q Consensus 326 ~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~---~~~~-----~~~~~~~i~~~~L~~~GV~v~~~~ 397 (442)
++.++.++++.+.+.+.| .+ .+....+..+.++++.+..-.. ..+- +.....+++.+++++.||.+.|+.
T Consensus 405 ~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~ 482 (521)
T TIGR03801 405 AETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGG 482 (521)
T ss_pred HHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCch
Confidence 345677888888888877 22 2222222234455555532100 0000 000235788888888999999988
Q ss_pred CcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 398 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 398 ~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
.+..+ ..++|+|+.. .++++++++.++|++++.+...+
T Consensus 483 ~Fg~~----~~~vRisla~-l~~~~~~~~~~rl~~~~~~~~~~ 520 (521)
T TIGR03801 483 GFGGP----EWSVRVSLAN-LNEYDYAEIGRAIRKILDEYYEA 520 (521)
T ss_pred hcCCC----CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 76431 2459999953 68899999999999998776543
No 271
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.64 E-value=3.8e-14 Score=139.04 Aligned_cols=249 Identities=16% Similarity=0.147 Sum_probs=157.4
Q ss_pred ccCcHHHHHHHHHHHhhhCCC----cEEEEcchHHHHHhhhhhhcc------------C--CCEEEeCCCchHHHHHHHH
Q 013461 150 YGTIDVHLDCEARIAKFLGTP----DSILYSYGLSTMFSAIPCFCK------------K--GDLIVADEGVHWGIQNGLY 211 (442)
Q Consensus 150 ~g~~~~~~~le~~lA~~~g~e----~~i~~~sG~~a~~~ai~a~~~------------~--gd~Vi~~~~~h~s~~~~~~ 211 (442)
.+..++.+++.+.+++++|.+ ..+++++|++++..++.++.. + +++|+++.++|.++..++.
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~ 113 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAA 113 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHH
Confidence 345566667777778888864 688899999999988877642 2 3489999999999988888
Q ss_pred hcCCeEEEecC-----CCHHHHHHHHHhhcc---cccc------------------------ccccccc--ccCCCcccc
Q 013461 212 LSRSTVVYFKH-----NDMDSLRNTLERVTA---DNKR------------------------SNSFGVL--GRSGRGLTE 257 (442)
Q Consensus 212 l~g~~v~~~~~-----~d~~~Le~~l~~~~~---~~~~------------------------a~~~g~~--G~~g~g~~~ 257 (442)
..|.+++.++. .|+++|++.+++... .... .|++-++ +..+.+...
T Consensus 114 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~ 193 (345)
T cd06450 114 YLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLP 193 (345)
T ss_pred HHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhh
Confidence 88888888763 378899988876211 1100 1111111 111111100
Q ss_pred --ccC---CCCCceeEEEEeccccccCCC--cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh--cChHH
Q 013461 258 --HCG---VPVDKIDIVTAAMGHALATEG--GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE--ENPDL 328 (442)
Q Consensus 258 --~~~---v~~~~~diii~S~sK~lg~~G--G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~--~~~~~ 328 (442)
... ....++|.++.|++|.++.+. |+++.+ +.+..++++.+. ..++.
T Consensus 194 ~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~------------------------~~~~~~~l~~l~~~g~~~~ 249 (345)
T cd06450 194 FPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------------------ALKLWATLRRFGRDGYGEH 249 (345)
T ss_pred ChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH------------------------HHHHHHHHHHHhHHHHHHH
Confidence 000 011357888999999886432 444333 222233444443 23467
Q ss_pred HHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 329 ITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 329 ~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
+++..++.+++.+.|.+++++++..++.++++.+.+..... ......++.+. |.++|+.+.+..... .+.
T Consensus 250 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~----~~~~~~~i~~~-L~~~g~~~~~~~~~~-----~~~ 319 (345)
T cd06450 250 IDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVK----LDELNYDLSDR-LNERGGWHVPATTLG-----GPN 319 (345)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcch----hhHHHHHHHHH-HHhcCCEEEEeeEEC-----CeE
Confidence 88888999999999998888887666678888887743100 01223467775 455555444332211 124
Q ss_pred ceEEEecCCC-CHHHHHHHHHHHHH
Q 013461 409 GIRLFVSAAH-SEADLVKACESLKR 432 (442)
Q Consensus 409 ~iRi~~~~~~-t~eei~~~i~~l~~ 432 (442)
.+|++++..+ |++|+++++++|++
T Consensus 320 ~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 320 VLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHh
Confidence 5999999875 99999999999975
No 272
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.63 E-value=1.4e-13 Score=138.59 Aligned_cols=313 Identities=12% Similarity=0.077 Sum_probs=169.2
Q ss_pred eEEEeecCCCCCCCC-ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC----CcEEEEcchHH
Q 013461 110 EVVNFASANYLGLIG-HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT----PDSILYSYGLS 180 (442)
Q Consensus 110 ~~id~~s~~~l~~~~-~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~----e~~i~~~sG~~ 180 (442)
++|||+.++..-... .+.+.+++.+.+.+-.... .-..|+......+|++.||+++ |. +++++++++.+
T Consensus 31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~ 108 (416)
T PRK09440 31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTE--ALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQS 108 (416)
T ss_pred CceeccCCCCCccCCHHHHHHHHHHHHhcCccccc--ccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHH
Confidence 468998766432221 1355666666554311000 0011222222345555555554 42 35555556668
Q ss_pred HHHhhhhhhcc-----CCCEEEe-CCCchHHHHHHHHhcC------CeEEEecC------CCHHHHHHHHHhhcc-----
Q 013461 181 TMFSAIPCFCK-----KGDLIVA-DEGVHWGIQNGLYLSR------STVVYFKH------NDMDSLRNTLERVTA----- 237 (442)
Q Consensus 181 a~~~ai~a~~~-----~gd~Vi~-~~~~h~s~~~~~~l~g------~~v~~~~~------~d~~~Le~~l~~~~~----- 237 (442)
++..++.++++ +||.|++ ..++|+.+...+...+ ..++.++. .|++.|+ +.....
T Consensus 109 al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~ 186 (416)
T PRK09440 109 AFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVS 186 (416)
T ss_pred HHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEe
Confidence 99988888885 6899998 6888877665433221 22222221 1344443 111000
Q ss_pred --cccc-----------------cccccccccCCCcc----ccccCCCC--CceeEEEEeccccccCCC---cEEEcCHH
Q 013461 238 --DNKR-----------------SNSFGVLGRSGRGL----TEHCGVPV--DKIDIVTAAMGHALATEG---GFCTGSAR 289 (442)
Q Consensus 238 --~~~~-----------------a~~~g~~G~~g~g~----~~~~~v~~--~~~diii~S~sK~lg~~G---G~v~g~~~ 289 (442)
.++. .|++-++-+.-.+. ..+.+..+ .+..|+++||||+ +++| ||++++++
T Consensus 187 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~ 265 (416)
T PRK09440 187 RPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEE 265 (416)
T ss_pred cCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHH
Confidence 0000 23332221111110 00111111 3457889999996 6666 99999999
Q ss_pred hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh---cCh-HHHHHHHHHHHHHHHhhccC-C--CceeecCCCCCEEEE
Q 013461 290 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE---ENP-DLITKLKKNTAILRTGLSDI-H--GLSIASNPESPIVFL 362 (442)
Q Consensus 290 ~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~---~~~-~~~~~l~~~~~~l~~~L~~~-~--g~~~~~~~~~~i~~~ 362 (442)
+++.+......+.. +.+.+...++.++++.-+ ... .++..++++.+.+++.|.+. + ++.+..+..+.++|+
T Consensus 266 l~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~ 343 (416)
T PRK09440 266 IIEALSNMNGIISL--APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWL 343 (416)
T ss_pred HHHHHHHHHHHhcc--CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEE
Confidence 99988765433222 235555555555553211 111 13555666777777776542 2 345444446788888
Q ss_pred EecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC----CCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 363 ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR----LPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~----~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
.++.... + ..++++. +.++||.+.++..+...... ....+||+++. +++++++++++|++++++..
T Consensus 344 ~~~~~~~----~---~~~~~~~-l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 344 WFKDLPI----T---TEELYQR-LKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred ECCCCCC----C---HHHHHHH-HHHCCEEEechHhhCCCCccccCCcCceEEEEecC--CHHHHHHHHHHHHHHHHHHh
Confidence 7743100 1 2356665 45679999998754311100 02369999984 78999999999999988765
Q ss_pred h
Q 013461 439 R 439 (442)
Q Consensus 439 ~ 439 (442)
+
T Consensus 414 ~ 414 (416)
T PRK09440 414 A 414 (416)
T ss_pred h
Confidence 4
No 273
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.63 E-value=6.8e-14 Score=142.15 Aligned_cols=269 Identities=17% Similarity=0.200 Sum_probs=159.9
Q ss_pred cccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhc-cCCCEEEeCCCchHHHHHHHHh----cCCeEEEec
Q 013461 149 FYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFC-KKGDLIVADEGVHWGIQNGLYL----SRSTVVYFK 221 (442)
Q Consensus 149 ~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~-~~gd~Vi~~~~~h~s~~~~~~l----~g~~v~~~~ 221 (442)
..|..+...++++.+++++|.+ +++++++|++++.+++.++. ++||.|++.++.|+++...++. .|.+++.++
T Consensus 107 ~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~ 186 (447)
T PRK00451 107 SQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVP 186 (447)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEec
Confidence 4556666777888999999965 45677888888888887774 7899999999999988877654 588888887
Q ss_pred CC----CHHHHHHHHHhhcccccc--------------------ccccccc-ccCCC--ccccccCCCCCceeEEEE---
Q 013461 222 HN----DMDSLRNTLERVTADNKR--------------------SNSFGVL-GRSGR--GLTEHCGVPVDKIDIVTA--- 271 (442)
Q Consensus 222 ~~----d~~~Le~~l~~~~~~~~~--------------------a~~~g~~-G~~g~--g~~~~~~v~~~~~diii~--- 271 (442)
.+ |++++++.+++.+..... .++..++ +.... |..... ...++|++++
T Consensus 187 ~~~~~~d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g~~~~~--~~~~~D~~~~s~~ 264 (447)
T PRK00451 187 YEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLGLLKPP--GEYGADIVVGEGQ 264 (447)
T ss_pred CCCCCCCHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhccCCCc--ccCCCCEEEECCC
Confidence 65 677777766432211100 2221111 11100 111101 1235788888
Q ss_pred eccccccC---CCcEEEcCHHhHHHHHhh---------C-Cce----------------eccC-CCcHHHHHHHHHHHHH
Q 013461 272 AMGHALAT---EGGFCTGSARVVDHQRLS---------S-SGY----------------VFSA-SLPPYLASAAITAIDV 321 (442)
Q Consensus 272 S~sK~lg~---~GG~v~g~~~~i~~l~~~---------~-~~~----------------~~s~-s~~p~~aaaa~aal~~ 321 (442)
+|||.+.. .+||+++++++++.+... + .+| .... +..++.+.++..+++.
T Consensus 265 k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~ 344 (447)
T PRK00451 265 PLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSL 344 (447)
T ss_pred cCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 55665432 348998998888874110 0 000 0011 1112222233334543
Q ss_pred Hhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEE-EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEee-cc
Q 013461 322 LEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVF-LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVT-SK 397 (442)
Q Consensus 322 l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~-~~ 397 (442)
+.+ .+++.+++.++++++.+.|++++|+++.. ++++. +.+..+. + ..++++++++ +||.+.. ..
T Consensus 345 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~---~~~~~~~~v~~~~-----~---~~~~~~~L~~-~gi~~~~~~~ 412 (447)
T PRK00451 345 LGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD---GPFFNEFVVRLPK-----P---AEEVNEALLE-KGILGGYDLG 412 (447)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC---CCeEEEEEEecCC-----C---HHHHHHHHHh-cCCCCCcccc
Confidence 322 35678899999999999999887787752 23322 2221110 1 2467776554 5776321 11
Q ss_pred CcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 398 RSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 398 ~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
... + ..+..+|++++..+|++|+++++++|++++
T Consensus 413 ~~~-~--~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 413 RYY-P--ELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ccc-C--CcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 111 0 012469999998899999999999998764
No 274
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.62 E-value=6.8e-14 Score=138.09 Aligned_cols=206 Identities=13% Similarity=0.136 Sum_probs=139.3
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~L 228 (442)
.+.+.+||+++|++.|.+.++++++|++|+..++ +++++||.|++..+.|++.. ..+...|+++.+++..|++++
T Consensus 51 ~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 129 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAI 129 (366)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHH
Confidence 3557899999999999999999999999998766 57799999999988887643 344567899999988889999
Q ss_pred HHHHHhhcccc-------cc--------------cccccccccCCCccccccCCC-CCceeEEEEeccccccC----CCc
Q 013461 229 RNTLERVTADN-------KR--------------SNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 229 e~~l~~~~~~~-------~~--------------a~~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~----~GG 282 (442)
++.+++.++.. +. .|+.-++-+.-.+. .....+ ....||+++|++|.++. .||
T Consensus 130 ~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~-~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G 208 (366)
T PRK08247 130 EQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYT-PVLQRPLEEGADIVIHSATKYLGGHNDVLAG 208 (366)
T ss_pred HHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-ccccCchhcCCcEEEeecceeccCCCceeee
Confidence 88876532211 00 22222221111110 111111 13579999999999974 468
Q ss_pred EEEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCcee-ecCCCCCEE
Q 013461 283 FCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSI-ASNPESPIV 360 (442)
Q Consensus 283 ~v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~~~~i~ 360 (442)
+++++ +++++.++.... ..+..++|+.+..+..+++.+ ..++++.+++.+.+.+.|++.|++.. ..++.+.++
T Consensus 209 ~iv~~~~~l~~~~~~~~~--~~g~~~s~~~a~l~~~~l~tl---~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~ 283 (366)
T PRK08247 209 LVVAKGQELCERLAYYQN--AAGAVLSPFDSWLLIRGMKTL---ALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGML 283 (366)
T ss_pred EEecChHHHHHHHHHHHH--hcCCCCChHHHHHHHhccCcH---HHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEE
Confidence 88886 667666653321 123345677766666665544 34566778999999999998878764 334467788
Q ss_pred EEEec
Q 013461 361 FLILE 365 (442)
Q Consensus 361 ~~~~~ 365 (442)
.+.++
T Consensus 284 sf~~~ 288 (366)
T PRK08247 284 SFRLQ 288 (366)
T ss_pred EEEEC
Confidence 88773
No 275
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.62 E-value=9.9e-14 Score=138.45 Aligned_cols=192 Identities=16% Similarity=0.129 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+.+|++.|.+.++++++|+.|+..++.+++++||.|+++.+.|+.+. ..+...|+++..++.+|+++++
T Consensus 65 p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 144 (403)
T PRK07503 65 PTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALK 144 (403)
T ss_pred chHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHH
Confidence 457899999999999999999999999999999999999999999998886543 3455678899998888888888
Q ss_pred HHHHhhcccccc---------------------cccccccccCCCccccccCCC-CCceeEEEEeccccccCC----CcE
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALATE----GGF 283 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~~----GG~ 283 (442)
+.+++.++-... .|++-++-+..... ...+.+ ....|+++.|++|.+|.. ||+
T Consensus 145 ~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~-~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~ 223 (403)
T PRK07503 145 AAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCT-PYLQRPLELGADLVVHSATKYLGGHGDITAGL 223 (403)
T ss_pred HhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCchhhCCCEEEccccccccCCCceeEEE
Confidence 887653221100 22222221111110 001110 124689999999999753 689
Q ss_pred EEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 284 CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 284 v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+++++++++.++........+..++|+.++.++..++.+. .+.++..++...+.+.|.+.|.+
T Consensus 224 v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~---~r~~~~~~na~~~a~~L~~~p~v 286 (403)
T PRK07503 224 VVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLA---LRMDRHCASAQAVAEWLARHPAV 286 (403)
T ss_pred EEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHH---HHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999998888764322223456778998887777666553 35566667788888888766544
No 276
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.61 E-value=1.2e-13 Score=137.06 Aligned_cols=190 Identities=14% Similarity=0.120 Sum_probs=131.9
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~L 228 (442)
.+...++|+.+|+++|.+.++++++|++|+..++.+++++||.|+++.+.|++... .+...|.++..++.+|++++
T Consensus 53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l 132 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAW 132 (380)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHH
Confidence 45678999999999999999999999999999999999999999998888876433 34556888988888888888
Q ss_pred HHHHHhhcccccc---------------------ccccccccc-CC-CccccccCCCCCceeEEEEeccccccCC----C
Q 013461 229 RNTLERVTADNKR---------------------SNSFGVLGR-SG-RGLTEHCGVPVDKIDIVTAAMGHALATE----G 281 (442)
Q Consensus 229 e~~l~~~~~~~~~---------------------a~~~g~~G~-~g-~g~~~~~~v~~~~~diii~S~sK~lg~~----G 281 (442)
++.++..++-... .++.-++-+ +. .+... ..+ ..+.|+++.|++|.++.. |
T Consensus 133 ~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~-~pl-~~g~Divv~S~sK~l~g~g~~~g 210 (380)
T TIGR01325 133 EAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQ-QPL-KLGADVVVYSATKHIDGQGRVMG 210 (380)
T ss_pred HHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch-hhCCCEEEeeccceecCCCCeEE
Confidence 8776542211000 222212111 10 11110 111 134689999999999753 5
Q ss_pred cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 282 GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
|++++++++++.++.... .++..++|..++.++..++.+. .+.++..+++..+.+.|++.|++
T Consensus 211 G~vv~~~~~~~~l~~~~~--~~g~~~~p~~a~~~l~~l~tl~---~r~~~~~~~a~~la~~L~~~p~v 273 (380)
T TIGR01325 211 GVIAGSEELMAEVAVYLR--HTGPAMSPFNAWVLLKGLETLS---LRMQKQFDSALAIAEWLQAQPQV 273 (380)
T ss_pred EEEEeCHHHHHHHHHHHH--hhCCCCCHHHHHHHHhccCcHH---HHHHHHHHHHHHHHHHHHcCCCc
Confidence 899999998887764422 2355667887776666665553 35677778888888888876544
No 277
>PRK06460 hypothetical protein; Provisional
Probab=99.61 E-value=1.4e-13 Score=136.20 Aligned_cols=191 Identities=13% Similarity=0.091 Sum_probs=129.0
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCch----HHHHHHHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVH----WGIQNGLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h----~s~~~~~~l~g~~v~~~~~~d~~~L 228 (442)
.+.+.+||+++|++.|.+.++++++|++++..++.+++++||.|++..+.+ ..+...++..|.++..++.++.+.+
T Consensus 44 ~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l 123 (376)
T PRK06460 44 NPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNII 123 (376)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHH
Confidence 466789999999999999999999999999999999999999999886543 3344567778899988887766555
Q ss_pred HHHHHhhcccc-------cc--------------cccccccccCCCcc-ccccCCCCCceeEEEEeccccccC----CCc
Q 013461 229 RNTLERVTADN-------KR--------------SNSFGVLGRSGRGL-TEHCGVPVDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 229 e~~l~~~~~~~-------~~--------------a~~~g~~G~~g~g~-~~~~~v~~~~~diii~S~sK~lg~----~GG 282 (442)
+++++..++-. +. .|+.-++-+.-.+. ...... ..+.|+++.|+||+++. .+|
T Consensus 124 ~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l-~~~~divv~S~sK~l~G~~~~~~G 202 (376)
T PRK06460 124 EKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPL-ELGADIVVHSASKFLAGHNDVIAG 202 (376)
T ss_pred HHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChh-hcCCCEEEeecceeccCCCCceEE
Confidence 55443221100 00 22221221111110 000111 13478999999999963 369
Q ss_pred EEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
++++++++++.++..... ++.+++|..+..++..++.+ +.++++++++++++.+.|++.|.+
T Consensus 203 ~~~~~~~l~~~l~~~~~~--~g~~~~~~~a~~~l~~~~~l---~~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 203 LAAGYGKLLNVIDQMRRT--LGTSLDPHAAYLTLRGIKTL---KIRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred EEecCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhchhhH---HHHHHHHHHHHHHHHHHHHcCCCc
Confidence 999999999888754333 34456776665555555555 346788889999999998876543
No 278
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.61 E-value=2.4e-13 Score=146.74 Aligned_cols=317 Identities=12% Similarity=0.055 Sum_probs=190.7
Q ss_pred eeEEEeecCCCCCCCCChHH-HHHHHHHHHh-cCCCCCccCccccCcHHHHHHHHHHHhhhCCC--c--EEEEcchHHHH
Q 013461 109 KEVVNFASANYLGLIGHEKL-LESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--D--SILYSYGLSTM 182 (442)
Q Consensus 109 ~~~id~~s~~~l~~~~~p~v-~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~--~i~~~sG~~a~ 182 (442)
.-|+|-++... ..|.. .+++.+.+.+ +++....+....-+.+..++.++.+|+|+|.+ + +++++++++++
T Consensus 35 ~iYLD~Aatt~----~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~al 110 (805)
T PLN02724 35 VVYLDHAGATL----YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAAL 110 (805)
T ss_pred CEeEeCCCCCC----CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHH
Confidence 45777654332 13444 4444455554 33333222222224677899999999999962 3 35555677888
Q ss_pred Hhhhhhh-ccCCCEEEeCCCchHHHHHHHH---hcCCeEEEecCC-----------CH----HHHHHHHHh----h---c
Q 013461 183 FSAIPCF-CKKGDLIVADEGVHWGIQNGLY---LSRSTVVYFKHN-----------DM----DSLRNTLER----V---T 236 (442)
Q Consensus 183 ~~ai~a~-~~~gd~Vi~~~~~h~s~~~~~~---l~g~~v~~~~~~-----------d~----~~Le~~l~~----~---~ 236 (442)
..++.++ .++||+|++....|.+...... ..|+++.+++.+ ++ ++|++.++. . .
T Consensus 111 nlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~ 190 (805)
T PLN02724 111 KLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDG 190 (805)
T ss_pred HHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccC
Confidence 8887776 6889999999888988664332 347777776543 11 334443210 0 0
Q ss_pred ccccc------cccccc-------------------------cccCCCcccccc--CCCCCceeEEEEecccccc-CCC-
Q 013461 237 ADNKR------SNSFGV-------------------------LGRSGRGLTEHC--GVPVDKIDIVTAAMGHALA-TEG- 281 (442)
Q Consensus 237 ~~~~~------a~~~g~-------------------------~G~~g~g~~~~~--~v~~~~~diii~S~sK~lg-~~G- 281 (442)
+..+. ++-.|. +--++.....+. ++...++|+++.|++|.+| ..|
T Consensus 191 ~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~ 270 (805)
T PLN02724 191 EAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGL 270 (805)
T ss_pred CCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCCc
Confidence 11111 011111 000111112222 3333467999999999998 445
Q ss_pred cEEEcCHHhHHHHHhhCCc---------------------eeccC-CCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHH
Q 013461 282 GFCTGSARVVDHQRLSSSG---------------------YVFSA-SLPPYLASAAITAIDVLEE--NPDLITKLKKNTA 337 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~---------------------~~~s~-s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~ 337 (442)
|+++.++++.+.+...-.+ ..|.. +.+....++..++++.+.+ .+.+.++.+++.+
T Consensus 271 G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~ 350 (805)
T PLN02724 271 GALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTH 350 (805)
T ss_pred eEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 8999998887765432110 01222 3344455556678888875 3567788999999
Q ss_pred HHHHhhccCC------CceeecC--------CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccc-
Q 013461 338 ILRTGLSDIH------GLSIASN--------PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD- 402 (442)
Q Consensus 338 ~l~~~L~~~~------g~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~- 402 (442)
++.+.|.+++ ++++.++ ..+|++.+.+....+..- . ..+ +..++.+.||.++.+..+...
T Consensus 351 ~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v-~---~~~-v~~l~~~~gI~vR~G~~Ca~~~ 425 (805)
T PLN02724 351 YVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWV-G---HRE-VEKLASLSGIQLRTGCFCNPGA 425 (805)
T ss_pred HHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEe-C---HHH-HHHHHHhcCcEEeeccccCchH
Confidence 9999998875 4666653 256899888864322110 0 112 334556679999988765321
Q ss_pred --c---------------------------CCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 403 --K---------------------------CRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 403 --~---------------------------~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
. ..+...+|+|++..+|++||+++++.|++..
T Consensus 426 ~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 426 CAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 0 1112569999999999999999999999864
No 279
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=8.9e-14 Score=137.86 Aligned_cols=189 Identities=15% Similarity=0.087 Sum_probs=130.1
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH---HhcCCeEEEecCCCHHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL---YLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~---~l~g~~v~~~~~~d~~~Le 229 (442)
.+.+.+||+++|+++|.++++++++|++|+..++.+++++||.|+++.+.|.++...+ ...|.++..++ .|+++++
T Consensus 52 np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-~d~~~l~ 130 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-PSTEDII 130 (385)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-CCHHHHH
Confidence 3567899999999999999999999999999999999999999999999999877655 34567776654 4678888
Q ss_pred HHHHh-hcccccc---------------------cccccccccCC--CccccccCCCCCceeEEEEeccccccC----CC
Q 013461 230 NTLER-VTADNKR---------------------SNSFGVLGRSG--RGLTEHCGVPVDKIDIVTAAMGHALAT----EG 281 (442)
Q Consensus 230 ~~l~~-~~~~~~~---------------------a~~~g~~G~~g--~g~~~~~~v~~~~~diii~S~sK~lg~----~G 281 (442)
+.+++ .++-... .++.-++-+.- .|.. ..++ ..+.|+++.|++|.++. .|
T Consensus 131 ~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~-~~~l-~~GaDivv~S~sK~l~g~~d~~g 208 (385)
T PRK08574 131 EAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLL-YRPL-RHGADFVVHSLTKYIAGHNDVVG 208 (385)
T ss_pred HhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc-CChh-hhCCcEEEeeCceeecCCCCcee
Confidence 87764 2211000 22222221111 1111 1112 13569999999999964 36
Q ss_pred c-EEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 282 G-FCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 282 G-~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
| ++++++++.+.++.... .++..++|+.++.++..++.+. .++++..++..++.+.|++.|.+
T Consensus 209 G~vi~~~~~~~~~~~~~~~--~~g~~~~p~~a~l~l~~l~tL~---~R~~~~~~na~~la~~L~~~p~v 272 (385)
T PRK08574 209 GVAVAWSGEFLEELWEWRR--RLGTIMQPFEAYLVLRGLKTLE---VRFERQCRNAMAIAEFLSEHPKV 272 (385)
T ss_pred EEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHHHHHcCCCc
Confidence 7 56667888877664422 2566778888877777766553 46677777888888888766543
No 280
>PRK07049 methionine gamma-lyase; Validated
Probab=99.60 E-value=2e-13 Score=137.04 Aligned_cols=190 Identities=15% Similarity=0.149 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEec-CCCHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFK-HNDMDSL 228 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~-~~d~~~L 228 (442)
+.+..||+.||++.|.++++++++|++|+..++.+++++||.|+++.+.|+.+...+ ...|.+++.++ ..|.+++
T Consensus 83 Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l 162 (427)
T PRK07049 83 PNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAI 162 (427)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHH
Confidence 445799999999999999999999999999999999999999999999998875543 45688766554 4577888
Q ss_pred HHHHHhhc--ccccc----------------------c--------ccccc-cccCCCccccccCCCCCceeEEEEeccc
Q 013461 229 RNTLERVT--ADNKR----------------------S--------NSFGV-LGRSGRGLTEHCGVPVDKIDIVTAAMGH 275 (442)
Q Consensus 229 e~~l~~~~--~~~~~----------------------a--------~~~g~-~G~~g~g~~~~~~v~~~~~diii~S~sK 275 (442)
++.+++.. +..+. + +++-+ ..++..+......+. .+.||++.||||
T Consensus 163 ~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~-~g~divv~S~SK 241 (427)
T PRK07049 163 GAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLE-HGADLSVYSLTK 241 (427)
T ss_pred HHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccc-cCCCEEEEcCce
Confidence 87775321 11111 1 23222 222211111111111 246899999999
Q ss_pred cccC-C---CcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 276 ALAT-E---GGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 276 ~lg~-~---GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
++|. . +||+++++++++.++.... .++.+++|..+.+++..++.+ ..++++..++++.+.+.|++.|++
T Consensus 242 ~~gG~~glr~G~vv~~~~l~~~l~~~~~--~~g~~ls~~~a~l~~r~L~tl---~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 242 YVGGHSDLVAGAVLGRKALIRQVRALRS--AIGTQLDPHSCWMLGRSLETL---VLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred eecCCCCcEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHcCCChH---HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9983 3 5999999999888875432 345667888887776666544 345677788899999999877654
No 281
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=1e-12 Score=123.00 Aligned_cols=308 Identities=17% Similarity=0.169 Sum_probs=197.9
Q ss_pred eeEEEeecCCC---CCCCCChHHHHHHHHHHHhc-CCCCCccCccccCcHHHHHHHHHHHhhhC--------CCcEEEEc
Q 013461 109 KEVVNFASANY---LGLIGHEKLLESCTSALEKY-GVGSCGPRGFYGTIDVHLDCEARIAKFLG--------TPDSILYS 176 (442)
Q Consensus 109 ~~~id~~s~~~---l~~~~~p~v~ea~~~~l~~~-g~~~~~~~~~~g~~~~~~~le~~lA~~~g--------~e~~i~~~ 176 (442)
|.+|-++.+++ -.+.+.++..+|+.++++.. ++++ +....+...++++|+++. .+++++++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Y-------aps~G~~~AR~AVAeYl~~~l~~kl~a~DV~lts 133 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGY-------APSVGILPARRAVAEYLNRDLPNKLTADDVVLTS 133 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCc-------CCccccHHHHHHHHHHhhcCCCCccCcCceEEec
Confidence 57887777654 34446789999999999862 2333 333445688888898853 35778888
Q ss_pred chHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhcccccc--------
Q 013461 177 YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH-------NDMDSLRNTLERVTADNKR-------- 241 (442)
Q Consensus 177 sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-------~d~~~Le~~l~~~~~~~~~-------- 241 (442)
+.++|++.++.++.+||-.|+++++.++-+..-+..++..+++|+. -|++.+|.+..+.+.....
T Consensus 134 GC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcG 213 (447)
T KOG0259|consen 134 GCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCG 213 (447)
T ss_pred cchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCc
Confidence 8899999999999999999999999998888778888999988863 2677788777765532111
Q ss_pred --------------cccccc------------cccCCC-ccccccCCCCCceeEEEEeccccccCCC---cEEEcC----
Q 013461 242 --------------SNSFGV------------LGRSGR-GLTEHCGVPVDKIDIVTAAMGHALATEG---GFCTGS---- 287 (442)
Q Consensus 242 --------------a~~~g~------------~G~~g~-g~~~~~~v~~~~~diii~S~sK~lg~~G---G~v~g~---- 287 (442)
++..|+ +|.... .....-.+. -.|.+|++||.+=.+| ||++..
T Consensus 214 nVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiV---PVitlggisKrW~VPGWRlGWi~~hD~~g 290 (447)
T KOG0259|consen 214 NVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIV---PVITLGGISKRWIVPGWRLGWIALHDPRG 290 (447)
T ss_pred ccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccC---ceEeecccccccccCCceeeeEEEecccc
Confidence 222222 221110 111111111 2688999999997666 887643
Q ss_pred ----HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCE-E
Q 013461 288 ----ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPI-V 360 (442)
Q Consensus 288 ----~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i-~ 360 (442)
..+++.+..... -+...+.+.++|.-.-|+.-.+ ......-++.+.+.-.+.|+++|++.+.-.|.+.+ .
T Consensus 291 vf~~~~~~q~~~~~~~---~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~myl 367 (447)
T KOG0259|consen 291 VFRDTKVVQGIKNFLD---IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYL 367 (447)
T ss_pred cccchHHHHHHHHHHh---ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEE
Confidence 223333332211 1112233444433233332211 13456678889999999999999988654455543 3
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 361 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
++.+.-. .-.+-..-.+++.++.+|..+.+-|+..+.. ++.+|+++.. ..+.+++++++|+++..+..+
T Consensus 368 mv~l~~s---~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~-----~nw~Ri~i~~--~~~~leea~~Rik~Fc~RH~~ 436 (447)
T KOG0259|consen 368 MVKLNLS---LFPDIEDDVDFCQKLAREESVICLPGQAFGL-----KNWLRIVITV--EEEMLEEAFSRIKEFCDRHSK 436 (447)
T ss_pred Eeccchh---hhccccccHHHHHHHhhhcceEEeccccccC-----CCeEEEEEcc--ChHHHHHHHHHHHHHHHhhhh
Confidence 3333211 0011112236788777788999999887654 5679999985 669999999999998876543
No 282
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.60 E-value=1.9e-13 Score=136.31 Aligned_cols=189 Identities=15% Similarity=0.126 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++.|.++++++++|+.|+..++.+++++||.|+++...|++.+ ..++..|+++..++.+|+++++
T Consensus 70 p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 149 (403)
T PRK07810 70 PTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWE 149 (403)
T ss_pred chHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHH
Confidence 447899999999999999999999999999999999999999999886665443 3456679999999999999999
Q ss_pred HHHHhhcccccc---------------------ccccccccc-C-CCccccccCCCCCceeEEEEeccccccCC----Cc
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGR-S-GRGLTEHCGVPVDKIDIVTAAMGHALATE----GG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~-~-g~g~~~~~~v~~~~~diii~S~sK~lg~~----GG 282 (442)
+.+++.++..-. .|+.-++-+ + +.+.. ..++ ..++|+++.|++|.+++. ||
T Consensus 150 ~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~-~~~~-~~gaDivv~S~tK~l~g~g~~~gG 227 (403)
T PRK07810 150 EALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLL-QRGL-PLGADVVVYSGTKHIDGQGRVLGG 227 (403)
T ss_pred HhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCcccc-CChh-hcCCcEEEccCCceecCCcCceeE
Confidence 888654321110 222212111 1 11111 0112 235799999999999643 68
Q ss_pred EEEcCHHhHHH-HHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTGSARVVDH-QRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g~~~~i~~-l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+++++++.++. ++... ...+..++|+.++.++..|+.+ +.++++.+++..++.+.|++.|.+
T Consensus 228 ~v~~~~~~~~~~l~~~~--~~~g~~~s~~~a~l~l~~L~tl---~~R~~~~~~~a~~~a~~L~~~p~v 290 (403)
T PRK07810 228 AILGDREYIDGPVQKLM--RHTGPALSAFNAWVLLKGLETL---ALRVRHSNASALRIAEFLEGHPAV 290 (403)
T ss_pred EEEeChHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99998876653 33211 1234467899888877777665 446777788888888888876654
No 283
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.59 E-value=1e-13 Score=136.50 Aligned_cols=281 Identities=18% Similarity=0.178 Sum_probs=171.4
Q ss_pred CChHHHHHHHHHHHh-cCCCCCccCc-ccc--CcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhhc----cCC
Q 013461 124 GHEKLLESCTSALEK-YGVGSCGPRG-FYG--TIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCFC----KKG 193 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~-~g~~~~~~~~-~~g--~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~~----~~g 193 (442)
.++.+++++.+.+.. ++.. +.+. .++ ..+..+++++++|+++|.+ ++++++++++++..++.++. ++|
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g 87 (353)
T TIGR03235 10 IDPAVAEAMLPWLLEEFGNP--SSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKG 87 (353)
T ss_pred CCHHHHHHHHHHHHhcCCCC--CchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCC
Confidence 368999999999865 3322 2211 112 3467889999999999964 45555566789888888775 356
Q ss_pred -CEEEeCCCchHHHHHHH---HhcCCeEEEecC-----CCHHHHHHHHHhhcccccc---------------------cc
Q 013461 194 -DLIVADEGVHWGIQNGL---YLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR---------------------SN 243 (442)
Q Consensus 194 -d~Vi~~~~~h~s~~~~~---~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~---------------------a~ 243 (442)
|.|+++...|+++.... +..|.+++.++. .|++++++.+++.+.-... .+
T Consensus 88 ~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~ 167 (353)
T TIGR03235 88 KKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAH 167 (353)
T ss_pred CCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHc
Confidence 78999999998876553 345788887764 3677887777542211100 22
Q ss_pred cccccc--cCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCcee--------c-cCCCcHHH
Q 013461 244 SFGVLG--RSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGYV--------F-SASLPPYL 311 (442)
Q Consensus 244 ~~g~~G--~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~~~--------~-s~s~~p~~ 311 (442)
+.-++- .++.|.. .++++..++|+++.|.+|.+|..| |+++.+++..+..+. .+.. + .++.++..
T Consensus 168 ~~~~ivD~a~~~g~~-~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~gt~~~~~ 244 (353)
T TIGR03235 168 EAFFHVDAAQVVGKI-TVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPL--KPIMFGGGQERGLRPGTLPVHL 244 (353)
T ss_pred CCEEEEEchhhcCCc-cccccccCCCEEEeehhhcCCCCceEEEEEccCccccccc--CceeeCCCCcCccccCCCChHH
Confidence 211111 1122221 234444468999999999988665 888888765432211 1111 1 23345555
Q ss_pred HHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHhhccCCCceeecCCC---CCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 312 ASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSDIHGLSIASNPE---SPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 312 aaaa~aal~~l~~~-~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
.++..++++.+.+. +...++++++.+++++.|++ +|+++..++. ..++.+.+... + ..++.+ .|+
T Consensus 245 ~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~------~---~~~v~~-~L~ 313 (353)
T TIGR03235 245 IVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGV------N---SEALIV-NLR 313 (353)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCc------C---HHHHHH-HHh
Confidence 55566788876533 46788999999999999988 5988764322 33555554311 1 235555 466
Q ss_pred hCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHH
Q 013461 388 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLV 424 (442)
Q Consensus 388 ~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~ 424 (442)
+ ||.++++..+...... |..+|.++.. +++++.
T Consensus 314 ~-~i~v~~g~~~~~~~~~-~~~~l~~~g~--~~~~~~ 346 (353)
T TIGR03235 314 A-DAAVSTGSACSSSKYE-PSHVLQAMGL--DTDRAR 346 (353)
T ss_pred C-CeEEEchhhcCCCCCC-CCHHHHHcCC--CHHHhC
Confidence 5 8999988766433221 3346666664 444443
No 284
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.59 E-value=4e-13 Score=137.08 Aligned_cols=306 Identities=15% Similarity=0.150 Sum_probs=176.2
Q ss_pred CCCCChHHHHHHHHHHHhcCC-CCCccCccccCcHHHHHHHHHHHhhhCCCcEEEE-cchHHHHHhh---hh-hhccCCC
Q 013461 121 GLIGHEKLLESCTSALEKYGV-GSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILY-SYGLSTMFSA---IP-CFCKKGD 194 (442)
Q Consensus 121 ~~~~~p~v~ea~~~~l~~~g~-~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~-~sG~~a~~~a---i~-a~~~~gd 194 (442)
.+..+|.+++++.+....++. .+.......|..+.+.++++.+++++|.+.+.++ ++|+.+...+ ++ .+.++||
T Consensus 79 ~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd 158 (481)
T PRK04366 79 TMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGD 158 (481)
T ss_pred CCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCc
Confidence 333467888888765222222 1211135668889999999999999998876555 5565444332 33 2356676
Q ss_pred ----EEEeCCCchHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhcccccc--ccccccc---------------
Q 013461 195 ----LIVADEGVHWGIQNGLYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR--SNSFGVL--------------- 248 (442)
Q Consensus 195 ----~Vi~~~~~h~s~~~~~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~--a~~~g~~--------------- 248 (442)
.|+++++.|+++...+...|.+++.++. .|+++|++.+...+..... .+..|++
T Consensus 159 ~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~g 238 (481)
T PRK04366 159 TKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAG 238 (481)
T ss_pred CCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcC
Confidence 8999999999999999999999888765 3677777766543221100 0011211
Q ss_pred ------ccCCCccccccCCCCCceeEEEEeccccccCC-------CcEEEcCHHhHHHHHh-----hCCceeccC-----
Q 013461 249 ------GRSGRGLTEHCGVPVDKIDIVTAAMGHALATE-------GGFCTGSARVVDHQRL-----SSSGYVFSA----- 305 (442)
Q Consensus 249 ------G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~-------GG~v~g~~~~i~~l~~-----~~~~~~~s~----- 305 (442)
+.+..+..........++|++++|.+|.||.+ +|+++.++++.+.+.. .+..|.++.
T Consensus 239 al~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~ 318 (481)
T PRK04366 239 GLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKS 318 (481)
T ss_pred CEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeeccccccc
Confidence 11111111111112235799999999998632 2688888887776521 111222211
Q ss_pred -------CCcHHHHHHHHHHHHHHhc-C----hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEE-EEEecCCCCCch
Q 013461 306 -------SLPPYLASAAITAIDVLEE-N----PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIV-FLILEKSTGSMK 372 (442)
Q Consensus 306 -------s~~p~~aaaa~aal~~l~~-~----~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~-~~~~~~~~~~~~ 372 (442)
+.+... +.++..++.. . .++.++..++.+++++.|.++..+.. . .+.+ .+.+..+. ..
T Consensus 319 i~r~~a~t~~~l~---~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~--~--~~~~~~~~~~~~~--~~ 389 (481)
T PRK04366 319 IGRVRAFYGNFGV---LVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPY--D--RPCMHEFVLSGKK--LK 389 (481)
T ss_pred CCCcccccCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccC--C--CCeeEEEEEECcc--cc
Confidence 111222 2333444332 1 23446667789999999987523222 1 2222 12221100 00
Q ss_pred hhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 373 NDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 373 ~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
.+.....++.++ |.++||.+....+|... ...+|++++..+|++|||+++++|+++.++..++
T Consensus 390 ~~g~~~~~v~~~-L~~~Gi~~~~~~~p~~~----~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~ 452 (481)
T PRK04366 390 ETGVRTLDIAKR-LLDYGFHPPTIYFPLIV----PEALMIEPTETESKETLDAFIAAMKQIAEEAKEN 452 (481)
T ss_pred ccCCCHHHHHHH-HHHCCccCCcccccccc----CCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 000123467776 55669987644333221 2359999999999999999999999998876543
No 285
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.58 E-value=2e-13 Score=136.01 Aligned_cols=189 Identities=16% Similarity=0.141 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|+++|.+.++++++|+.++..++.+++++||.|+++.+.|+++...+ ...|.++..++..|+++++
T Consensus 65 p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~ 144 (398)
T PRK07504 65 PTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWE 144 (398)
T ss_pred chHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHH
Confidence 456899999999999999999999999999888888999999999998888754432 3458888888888888888
Q ss_pred HHHHhhcccccc-------------------ccccc--cc-ccC-CCccccccCCCCCceeEEEEeccccccCC----Cc
Q 013461 230 NTLERVTADNKR-------------------SNSFG--VL-GRS-GRGLTEHCGVPVDKIDIVTAAMGHALATE----GG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~-------------------a~~~g--~~-G~~-g~g~~~~~~v~~~~~diii~S~sK~lg~~----GG 282 (442)
+.+++.++-... ++..| ++ ... ..+... ..+ ..+.|+++.|++|.+++. ||
T Consensus 145 ~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-~~~-~~gaDivv~S~sK~l~g~g~~~GG 222 (398)
T PRK07504 145 KAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-KPL-ELGAHIVVYSATKHIDGQGRCLGG 222 (398)
T ss_pred HhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-Cch-hhCCCEEEeeccccccCCccceEE
Confidence 877543321110 22112 11 111 001110 011 124699999999999653 57
Q ss_pred EEEcCHHhHHH-HHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTGSARVVDH-QRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g~~~~i~~-l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+++++++.++. ++... ...+..++|+.++.++..++.+. .++++..++..++.+.|.+.|++
T Consensus 223 ~vv~~~~~i~~~~~~~~--~~~g~~~s~~~A~~~l~~L~tl~---~R~~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 223 VVLSDKAWIEEHLQDYF--RHTGPSLSPFNAWTLLKGLETLP---VRVRQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred EEEeCcHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccchHH---HHHHHHHHHHHHHHHHHHcCCCc
Confidence 88888876653 32211 12344678998888877777663 46677778888888888876654
No 286
>PLN02368 alanine transaminase
Probab=99.58 E-value=2.7e-13 Score=135.26 Aligned_cols=206 Identities=10% Similarity=0.113 Sum_probs=131.9
Q ss_pred HHHHHHHHhhh----CC----CcEEEEcchHHHHHhhhhhhc-cCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-----
Q 013461 157 LDCEARIAKFL----GT----PDSILYSYGLSTMFSAIPCFC-KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH----- 222 (442)
Q Consensus 157 ~~le~~lA~~~----g~----e~~i~~~sG~~a~~~ai~a~~-~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~----- 222 (442)
.+|++.||+++ |. +++++++++++++..++.+++ ++||.|+++.++|..+...+...|++++.++.
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~ 189 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESEN 189 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccC
Confidence 45555555554 52 355556666789999999887 79999999999999999999999999887753
Q ss_pred --CCHHHHHHHHHhhcc---ccc----------c-----------------cccccccccC--------C--C--ccccc
Q 013461 223 --NDMDSLRNTLERVTA---DNK----------R-----------------SNSFGVLGRS--------G--R--GLTEH 258 (442)
Q Consensus 223 --~d~~~Le~~l~~~~~---~~~----------~-----------------a~~~g~~G~~--------g--~--g~~~~ 258 (442)
.|+++|++.++.... +.+ . .|++-++-+. + . .+.+.
T Consensus 190 ~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~ 269 (407)
T PLN02368 190 WGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKV 269 (407)
T ss_pred CCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHH
Confidence 257888887764210 111 0 2333222111 1 0 00010
Q ss_pred c-CCCC----CceeEEEEeccccc-cCCC---cEEE---cCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHH-----
Q 013461 259 C-GVPV----DKIDIVTAAMGHAL-ATEG---GFCT---GSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV----- 321 (442)
Q Consensus 259 ~-~v~~----~~~diii~S~sK~l-g~~G---G~v~---g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~----- 321 (442)
. ++.+ .+..|+++||||++ |++| ||++ +++++++.+.... ...+ +.+.+...++.++++-
T Consensus 270 ~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~~~--~~~~~~Q~aa~~~l~~~~~~~ 346 (407)
T PLN02368 270 LMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SIAL--SPNVSGQIFMGLMVNPPKPGD 346 (407)
T ss_pred HhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cccC--CCCcHHHHHHHHHhCCCCCCC
Confidence 0 1111 23678999999998 7776 9998 5888998887653 2222 2354555566666642
Q ss_pred ------HhcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEec
Q 013461 322 ------LEENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILE 365 (442)
Q Consensus 322 ------l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~ 365 (442)
.++..++++.++++++.+.+.|++++|+.+..+.++.++|..+.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 347 ISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 11123467889999999999999988988765444445555443
No 287
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.57 E-value=3e-12 Score=128.84 Aligned_cols=271 Identities=18% Similarity=0.192 Sum_probs=165.6
Q ss_pred HHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh---------ccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC--
Q 013461 155 VHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF---------CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-- 223 (442)
Q Consensus 155 ~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~---------~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-- 223 (442)
...++|+++|+++|.++++++++|++++..++.++ .++||.|+++.++|.++..++...|+++++++.+
T Consensus 64 ~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~ 143 (438)
T PRK15407 64 FNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELP 143 (438)
T ss_pred hHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 46799999999999999999999999999988765 4899999999999999999999999998877642
Q ss_pred ----CHHHHHHHHHhhcccccc------------------cccccccccCCCcccccc-CCCC-CceeEEEEecc--ccc
Q 013461 224 ----DMDSLRNTLERVTADNKR------------------SNSFGVLGRSGRGLTEHC-GVPV-DKIDIVTAAMG--HAL 277 (442)
Q Consensus 224 ----d~~~Le~~l~~~~~~~~~------------------a~~~g~~G~~g~g~~~~~-~v~~-~~~diii~S~s--K~l 277 (442)
|++++++.+...++.... .|++-++-+........+ |... .--|+.+.||+ |.+
T Consensus 144 ~~~id~~~le~~i~~~tkaVi~~~~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~~fSf~~~k~~ 223 (438)
T PRK15407 144 TYNIDASLLEAAVSPKTKAIMIAHTLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIATLSFYPAHHI 223 (438)
T ss_pred cCCcCHHHHHHHcCcCCeEEEEeCCCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceEEEeCCCCCCc
Confidence 567777766432221100 122211111100000000 1000 01166777774 656
Q ss_pred c-CCCcEEEcCH-HhHHHH---HhhCCc----------------------------------eeccCCCcHHHHHHHHHH
Q 013461 278 A-TEGGFCTGSA-RVVDHQ---RLSSSG----------------------------------YVFSASLPPYLASAAITA 318 (442)
Q Consensus 278 g-~~GG~v~g~~-~~i~~l---~~~~~~----------------------------------~~~s~s~~p~~aaaa~aa 318 (442)
. ..||+++.++ ++.+.+ +..+.. ..+...++.+.||.++..
T Consensus 224 ~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~q 303 (438)
T PRK15407 224 TMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQ 303 (438)
T ss_pred cccCceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHH
Confidence 4 3478877654 443333 222110 113345788999998888
Q ss_pred HHHHhcChHHHHHHHHHHHHHHHhhccCCC-ceeecC-CC-CC---EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE
Q 013461 319 IDVLEENPDLITKLKKNTAILRTGLSDIHG-LSIASN-PE-SP---IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF 392 (442)
Q Consensus 319 l~~l~~~~~~~~~l~~~~~~l~~~L~~~~g-~~~~~~-~~-~~---i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~ 392 (442)
|+.+++ ..++-+++.+++.+.|.++++ +.+... +. .+ .+.+.+....+ .. -.++.+. |+++||.
T Consensus 304 L~~l~~---~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-----Rd~l~~~-L~~~GI~ 373 (438)
T PRK15407 304 LEKLPG---FIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAG-FT-----RVELVKY-LEENKIG 373 (438)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCC-CC-----HHHHHHH-HHHCCCC
Confidence 887754 566667788888899987654 322211 11 12 33344432111 01 1256664 6677997
Q ss_pred EeeccCcccc------------cCCCCC-------ceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 393 VVTSKRSMLD------------KCRLPV-------GIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 393 v~~~~~~~~~------------~~~~~~-------~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
+.....+.+. ...+|. .|-+.++..+|++|+++++++|+++++
T Consensus 374 ~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 374 TRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred ccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 7643321110 011232 277888888999999999999998864
No 288
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=5.9e-13 Score=132.29 Aligned_cols=189 Identities=13% Similarity=0.069 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHh----cCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYL----SRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l----~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++.|.+.++++++|++|+..++.+++++||.|+++.+.|+++...+.. .+.++..++..|+++++
T Consensus 61 p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~ 140 (388)
T PRK07811 61 PTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVR 140 (388)
T ss_pred ccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHH
Confidence 45689999999999999999999999999999999999999999999999876544332 47777888777888888
Q ss_pred HHHHhhcccccc---------------------cccccccccCC--CccccccCCCCCceeEEEEeccccccCC----Cc
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSG--RGLTEHCGVPVDKIDIVTAAMGHALATE----GG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g--~g~~~~~~v~~~~~diii~S~sK~lg~~----GG 282 (442)
+.+.+.++.... .|+.-++-+.- .+.. ...+ ....|+++.|++|.++.. ||
T Consensus 141 ~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-~~p~-~~gaDivv~S~sK~l~g~~~~~gG 218 (388)
T PRK07811 141 AAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-QQPL-ALGADVVVHSTTKYIGGHSDVVGG 218 (388)
T ss_pred HhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-CCch-hhCCcEEEecCceeecCCCCcEEE
Confidence 877653321100 22222221111 1110 0011 135689999999999753 58
Q ss_pred EEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
++++ ++++.+.++... ...+...+|..+..++..++. .+.++++.+++...+.+.|++.|++
T Consensus 219 ~vv~~~~~l~~~~~~~~--~~~g~~~s~~~a~l~~~~L~t---l~~R~~~~~~na~~la~~L~~~p~v 281 (388)
T PRK07811 219 ALVTNDEELDEAFAFLQ--NGAGAVPGPFDAYLTLRGLKT---LAVRMDRHSENAEAVAEFLAGHPEV 281 (388)
T ss_pred EEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 7765 566666555321 122344567776655555544 3456777788899999999877654
No 289
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.57 E-value=1.4e-12 Score=127.71 Aligned_cols=291 Identities=12% Similarity=0.110 Sum_probs=178.5
Q ss_pred ChHHHHHHHHHHHhcCCCCCccCcccc-Cc---HHHHHHHHHHHhhhCCC---cEEEEcc-hHHHHHhhhhhhccCCCEE
Q 013461 125 HEKLLESCTSALEKYGVGSCGPRGFYG-TI---DVHLDCEARIAKFLGTP---DSILYSY-GLSTMFSAIPCFCKKGDLI 196 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~~~~~~~~g-~~---~~~~~le~~lA~~~g~e---~~i~~~s-G~~a~~~ai~a~~~~gd~V 196 (442)
+..|++++.+.+.+|.....+...... .. +...++++.++++++.+ +++++++ |+.++.+++..+.++||.+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~ 83 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVA 83 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeE
Confidence 458999999999876632222211111 23 67788999999999952 4666654 8999999999998888754
Q ss_pred E-eCCCchHH-HHHHHHhcCCeEEEec------CCCHHHHHHHHHhhcccccc------ccccccc-c----c-------
Q 013461 197 V-ADEGVHWG-IQNGLYLSRSTVVYFK------HNDMDSLRNTLERVTADNKR------SNSFGVL-G----R------- 250 (442)
Q Consensus 197 i-~~~~~h~s-~~~~~~l~g~~v~~~~------~~d~~~Le~~l~~~~~~~~~------a~~~g~~-G----~------- 250 (442)
+ +..+.++. ....++..|. +..+. ..+..+++++... +..+. ..+.|+. . .
T Consensus 84 l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~th~ETstGv~~~~l~~~~~~l~iV 160 (349)
T TIGR01364 84 DYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEIS--EDAAYVHYCANETIHGVEFRELPDVKNAPLVA 160 (349)
T ss_pred EEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCC--CCCCEEEEcCCCCcccEecceecccCCCeEEE
Confidence 3 33333332 3444555566 44433 3344445533321 11111 3334433 1 0
Q ss_pred CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCc-----------eeccCCCcHHHHHHHHHH
Q 013461 251 SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSG-----------YVFSASLPPYLASAAITA 318 (442)
Q Consensus 251 ~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~-----------~~~s~s~~p~~aaaa~aa 318 (442)
++.....+..++.++.|+++.|..|+||.+| |+++.+++.++.+...... ..+ .++|-....+..++
T Consensus 161 Davss~g~~~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Tp~~~~i~al~~a 239 (349)
T TIGR01364 161 DMSSNILSRPIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMY-NTPPTFAIYVSGLV 239 (349)
T ss_pred EccccccCccCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCC-CCCcHHHHHHHHHH
Confidence 1111122334445667899999999999877 9999999988765332111 111 12233344455588
Q ss_pred HHHHhc---ChHHHHHHHHHHHHHHHhhccCCCceeec-C--CCC-CEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCE
Q 013461 319 IDVLEE---NPDLITKLKKNTAILRTGLSDIHGLSIAS-N--PES-PIVFLILEKSTGSMKNDLQLLEDIADWALKEDGV 391 (442)
Q Consensus 319 l~~l~~---~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~--~~~-~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV 391 (442)
|+++.+ .+.+.++.+++.+++++.|++++|+.... + ..+ .++.+.++.. ....++... +.+.|+
T Consensus 240 l~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~--------~~~~~~~~~-~~~~Gi 310 (349)
T TIGR01364 240 FKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE--------ELEKRFLKE-AEERGL 310 (349)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh--------hHhHHHHHH-HHHCCC
Confidence 988763 35678889999999999999987664432 1 134 3466665321 112345443 456799
Q ss_pred EEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 392 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 392 ~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.+.++... +..+|+|+...+|+|||++++++|+++.+
T Consensus 311 ~~~~~~~~-------~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 311 VSLKGHRS-------VGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred cccCCccc-------cCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 66554331 24599999999999999999999998654
No 290
>PRK08637 hypothetical protein; Provisional
Probab=99.57 E-value=2e-12 Score=128.87 Aligned_cols=245 Identities=15% Similarity=0.107 Sum_probs=146.4
Q ss_pred EEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH-hcCCeEEEecC--C----CHHHHHHHHHhhc-ccc----
Q 013461 172 SILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY-LSRSTVVYFKH--N----DMDSLRNTLERVT-ADN---- 239 (442)
Q Consensus 172 ~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~-l~g~~v~~~~~--~----d~~~Le~~l~~~~-~~~---- 239 (442)
+++++++++++..++.+++++||.|+++.|+|+.+...+. ..|++++.++. + |++++++.++... +..
T Consensus 72 I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~ 151 (388)
T PRK08637 72 PIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVI 151 (388)
T ss_pred eeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEE
Confidence 3556666799999999999999999999999988887654 57888887764 2 5677877766111 111
Q ss_pred ------cc---------------c-------ccccccccCC-Cccc-------ccc-CC-CCCce--eEEEEeccccccC
Q 013461 240 ------KR---------------S-------NSFGVLGRSG-RGLT-------EHC-GV-PVDKI--DIVTAAMGHALAT 279 (442)
Q Consensus 240 ------~~---------------a-------~~~g~~G~~g-~g~~-------~~~-~v-~~~~~--diii~S~sK~lg~ 279 (442)
+. + |.+-++-+.- ..+. ..+ .. +..+. .+.++||||.+++
T Consensus 152 ~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~ 231 (388)
T PRK08637 152 LNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFV 231 (388)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCC
Confidence 10 1 3332322111 1110 000 00 11122 3445699999987
Q ss_pred CC---cEEEc------CHHhHHHHHhhCC---ceeccCCCcHHHHHHHHHHHHH---HhcChHHHHHHHHHHHHHHHhhc
Q 013461 280 EG---GFCTG------SARVVDHQRLSSS---GYVFSASLPPYLASAAITAIDV---LEENPDLITKLKKNTAILRTGLS 344 (442)
Q Consensus 280 ~G---G~v~g------~~~~i~~l~~~~~---~~~~s~s~~p~~aaaa~aal~~---l~~~~~~~~~l~~~~~~l~~~L~ 344 (442)
+| ||++. ++++++.+..... .... .+.+.+.++++.++++. .+.....+..++++.+.+.+.|+
T Consensus 232 pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~ 310 (388)
T PRK08637 232 WGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNI-SNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLY 310 (388)
T ss_pred cccceEEEEEccccCCcHHHHHHHHHHHHHHhhccc-CCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 99874 4677777643210 0011 12345555555555532 11112344556777777777775
Q ss_pred cC---CCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHH
Q 013461 345 DI---HGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEA 421 (442)
Q Consensus 345 ~~---~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~e 421 (442)
+. +++.+..+..+.++|+.++. ....++++.+++++||.+.... +..+||+++. .+++
T Consensus 311 ~~~~~~~~~~~~~~~g~~~~~~l~~---------~~~~~l~~~l~~~~gv~~~~~~---------~~~iRi~~~~-~~~~ 371 (388)
T PRK08637 311 DGKYDDAWQAYPFNSGYFMCLKLKG---------VDAEELRVHLLEKYGIGTIALN---------ETDLRIAFSC-VEEE 371 (388)
T ss_pred hhCCCCCcccccccceEEEEecCCh---------HHHHHHHHHHhhhcceEEEecc---------CCceEEEeec-CCHH
Confidence 53 24555544445566666621 1234678776667799886421 2349999987 6789
Q ss_pred HHHHHHHHHHHHHHH
Q 013461 422 DLVKACESLKRISAV 436 (442)
Q Consensus 422 ei~~~i~~l~~~~~~ 436 (442)
++++++++|+++++.
T Consensus 372 ~i~~~~~~l~~~~~~ 386 (388)
T PRK08637 372 DIPELFDSIYKAIKD 386 (388)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998864
No 291
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.57 E-value=4.5e-13 Score=131.81 Aligned_cols=287 Identities=14% Similarity=0.129 Sum_probs=174.6
Q ss_pred CChHHHHHHHHHHHhcCCCCCccCccccCc-------HHHHHHHHHHHhhhCC--C-cEEEEcc-hHHHHHhhhhhhcc-
Q 013461 124 GHEKLLESCTSALEKYGVGSCGPRGFYGTI-------DVHLDCEARIAKFLGT--P-DSILYSY-GLSTMFSAIPCFCK- 191 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~-------~~~~~le~~lA~~~g~--e-~~i~~~s-G~~a~~~ai~a~~~- 191 (442)
.++.|++|+.+.+.+|+ ... |+.+... +..++.++.+++++|. + +++++++ ||+++..++..+.+
T Consensus 10 ~p~~V~~a~~~~~~~~~-~~~--rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~ 86 (355)
T cd00611 10 LPEEVLEQAQKELLDFN-GLG--MSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGD 86 (355)
T ss_pred CCHHHHHHHHHHHhhcc-cCC--ccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC
Confidence 36899999999998775 221 2222222 6788999999999995 2 4566655 88999999988876
Q ss_pred --CCCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHH-HHHHhhcccccc------ccccccc----cc--
Q 013461 192 --KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLR-NTLERVTADNKR------SNSFGVL----GR-- 250 (442)
Q Consensus 192 --~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le-~~l~~~~~~~~~------a~~~g~~----G~-- 250 (442)
+||+|+.....|.+ ...++..|.++..++.. +..+++ ..+ +++.+. ..+.|+. .+
T Consensus 87 ~~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~lV~~~h~~t~tG~~~~~i~~~~ 162 (355)
T cd00611 87 KGTADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDL---APDAAYVHYCSNETIHGVEFDEVPDTG 162 (355)
T ss_pred CCeEEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCC---CCCCCEEEEeCCcccccEEcceecccC
Confidence 77777764444433 33445567777766532 212222 222 222211 2223322 00
Q ss_pred ------CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCcee----------ccCCCcHHHHH
Q 013461 251 ------SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGYV----------FSASLPPYLAS 313 (442)
Q Consensus 251 ------~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~~~----------~s~s~~p~~aa 313 (442)
++.....+..++.++.|+...|-.|.+|..| |+++++++..+.+......+. ...+++-....
T Consensus 163 g~~~~VDa~qs~g~~~idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~ 242 (355)
T cd00611 163 GVPLVADMSSNILSRPIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIY 242 (355)
T ss_pred CCeEEEEccccccCCCCCHHHhCEEEeecccccCCCceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHH
Confidence 1111122333444556677776899999877 999999988876543211100 01122333445
Q ss_pred HHHHHHHHHhc---ChHHHHHHHHHHHHHHHhhccCCCce-eecC--CCC-CEEEEEecCCCCCchhhHHHHHHHHHHHH
Q 013461 314 AAITAIDVLEE---NPDLITKLKKNTAILRTGLSDIHGLS-IASN--PES-PIVFLILEKSTGSMKNDLQLLEDIADWAL 386 (442)
Q Consensus 314 aa~aal~~l~~---~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~--~~~-~i~~~~~~~~~~~~~~~~~~~~~i~~~~L 386 (442)
+..++++++.+ .+.+.++.+++.+++++.|++++|+. ...+ ..+ .++.+.++.. ....++.+. +
T Consensus 243 ~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~--------~l~~~~~~~-~ 313 (355)
T cd00611 243 MMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE--------ELEKEFLKE-A 313 (355)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh--------hhhHHHHHH-H
Confidence 55688998764 24677889999999999999987752 2111 234 3467666321 111234343 4
Q ss_pred HhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 387 KEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 387 ~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.+.|+.+.++.. ..+.+|+|+...+|++||++++++|+++
T Consensus 314 ~r~G~~~~~~~~-------~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 314 EAAGMIGLKGHR-------SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHCCCcccCCCc-------ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 456997444332 1245999999999999999999999985
No 292
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.56 E-value=3.2e-12 Score=121.68 Aligned_cols=280 Identities=13% Similarity=0.097 Sum_probs=181.9
Q ss_pred HHHHHHHhhhC--------CC-cEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC----C
Q 013461 158 DCEARIAKFLG--------TP-DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN----D 224 (442)
Q Consensus 158 ~le~~lA~~~g--------~e-~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~----d 224 (442)
+|...+.++.+ .+ +.+++++.+.+...+++.++++||.|+++..++.+....++..|+++++++.+ +
T Consensus 104 eLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~ 183 (472)
T KOG0634|consen 104 ELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGID 183 (472)
T ss_pred HHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCC
Confidence 45555555544 12 34555666799999999999999999999999999999999999999998864 6
Q ss_pred HHHHHHHHHhhcccc---cc-------------------------------cccccccccCCCccc--------------
Q 013461 225 MDSLRNTLERVTADN---KR-------------------------------SNSFGVLGRSGRGLT-------------- 256 (442)
Q Consensus 225 ~~~Le~~l~~~~~~~---~~-------------------------------a~~~g~~G~~g~g~~-------------- 256 (442)
++.|++++..-+... .. .|.|.++.++...+.
T Consensus 184 pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p 263 (472)
T KOG0634|consen 184 PESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESP 263 (472)
T ss_pred HHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCc
Confidence 899999987654320 00 233333322211111
Q ss_pred -------------cccCCCCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHH
Q 013461 257 -------------EHCGVPVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV 321 (442)
Q Consensus 257 -------------~~~~v~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~ 321 (442)
...+++-+.+.|-..||||-++. .-||+.+++..++++...+.. +.+ +++.+......+.++.
T Consensus 264 ~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~-~t~-~pSg~sq~iv~a~l~~ 341 (472)
T KOG0634|consen 264 AHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEV-ATS-GPSGFSQGIVYAMLKR 341 (472)
T ss_pred cccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcce-eec-CcccccHHHHHHHHHH
Confidence 12234456778999999999963 459999999888877554322 222 2232322222233322
Q ss_pred H------hcChHHHHHHHHHHHHHHHhhccC-C-C-ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEE
Q 013461 322 L------EENPDLITKLKKNTAILRTGLSDI-H-G-LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVF 392 (442)
Q Consensus 322 l------~~~~~~~~~l~~~~~~l~~~L~~~-~-g-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~ 392 (442)
. +...+++..+..++..+...|.+. | + +++.++..+.++|+.+.-..-..+.......++...++.++||.
T Consensus 342 wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~ 421 (472)
T KOG0634|consen 342 WGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVK 421 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeE
Confidence 2 222456777777888888887653 3 3 56666667778888885111111112222445666677788999
Q ss_pred EeeccCcccccCCC-CC-ceEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 393 VVTSKRSMLDKCRL-PV-GIRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 393 v~~~~~~~~~~~~~-~~-~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
+.++..+.+..... .. .+|++++. ...|+++++++++..++++....
T Consensus 422 ~v~G~~F~v~p~~s~~kiffRls~a~-a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 422 LVCGSWFMVDPESSWSKIFFRLSIAF-AEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred EecCceeEEcCccCCCcceEEEEeec-CCHHHHHHHHHHHHHHHHHHhhc
Confidence 99998876652221 11 48999987 46789999999999999886543
No 293
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=6.1e-13 Score=132.29 Aligned_cols=268 Identities=12% Similarity=0.056 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++.|.+.+++++||++|+..++.+++++||.|+++.+.|.++.. .+...|.++..++..+.++++
T Consensus 65 pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~ 144 (394)
T PRK07050 65 PTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIA 144 (394)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHH
Confidence 4568999999999999999999999999999999999999999999999987653 345678888888766677787
Q ss_pred HHHHhhcccccc---------------------cccccccccCCC--ccccccCCCCCceeEEEEeccccccC----CCc
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGR--GLTEHCGVPVDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~--g~~~~~~v~~~~~diii~S~sK~lg~----~GG 282 (442)
+.+++.++-... .|++-++-+.-. |.. ..+.. .+.|+++.|++|.++. .||
T Consensus 145 ~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~-~~~l~-~GaDi~v~S~tK~~~g~~~~~gG 222 (394)
T PRK07050 145 DLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA-FKPFE-HGVDISVQALTKYQSGGSDVLMG 222 (394)
T ss_pred HhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc-cCHHH-cCCeEEEEECCceecCCCCeeEE
Confidence 776543321100 222222211111 111 11111 2469999999999953 256
Q ss_pred E-EEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeec--------
Q 013461 283 F-CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIAS-------- 353 (442)
Q Consensus 283 ~-v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-------- 353 (442)
+ +.+++++++.++.... ..+.+++|..+..++ +-++....++++..++..++.+.|.+.|.+....
T Consensus 223 ~v~~~~~~~~~~~~~~~~--~~G~~~~~~~a~l~l---r~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p 297 (394)
T PRK07050 223 ATITADAELHAKLKLARM--RLGIGVSADDCSLVL---RGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCP 297 (394)
T ss_pred EEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHH---cCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 4 5567888887764321 234456777654443 3333334466777777777878777655432110
Q ss_pred ---------CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc-----------ccC-CCCCceEE
Q 013461 354 ---------NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-----------DKC-RLPVGIRL 412 (442)
Q Consensus 354 ---------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~-----------~~~-~~~~~iRi 412 (442)
...+.++.+.++... ......++++. |+..++.++-+...+. ... ..+.-||+
T Consensus 298 ~~~~~~~~~~~~g~~~s~~l~~~~-----~~~~~~~~~~~-l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~ 371 (394)
T PRK07050 298 GHAFWMRDFTGAGGLFSVVFDERY-----SPAQVDAFVEA-LELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRL 371 (394)
T ss_pred cHHHHHHhCCCCceEEEEEECCCC-----CHHHHHHHHHc-CCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEE
Confidence 012456777774311 11224456663 5554554433322110 000 11134999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 413 FVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 413 ~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
|+.. ||.+.+++-|.+++..++
T Consensus 372 svGl----E~~~dl~~dl~~al~~~~ 393 (394)
T PRK07050 372 YIGL----EDEADLIADLEQALEAAL 393 (394)
T ss_pred EeCc----CCHHHHHHHHHHHHHHhh
Confidence 9987 556666666666665543
No 294
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.54 E-value=1.3e-12 Score=128.88 Aligned_cols=192 Identities=15% Similarity=0.096 Sum_probs=135.7
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~~~d~~~L 228 (442)
.+-...||++||++.|.+.+++|+||+.|+.+++.+++++||.|+++...|.++...+ +-.|.++.+++..|.+++
T Consensus 61 nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 4667899999999999999999999999999999999999999999888888776654 446889999998899999
Q ss_pred HHHHHhhcccccc-------------------ccccc----ccccCCCccccccCCCCCceeEEEEeccccccCC----C
Q 013461 229 RNTLERVTADNKR-------------------SNSFG----VLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE----G 281 (442)
Q Consensus 229 e~~l~~~~~~~~~-------------------a~~~g----~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~----G 281 (442)
++.++..++-... +|..| ++-+.-.+..-.++....++|+++.|.+|.++.. +
T Consensus 141 ~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~ 220 (395)
T PRK08114 141 AKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMI 220 (395)
T ss_pred HHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCccee
Confidence 9888754321100 33321 2211111111113333346899999999999643 4
Q ss_pred cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 282 GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 282 G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
|+++++++..+.++.. ....+..++|..|...+..|+.+ +-++++..++...+.+.|++.|.+
T Consensus 221 G~v~~~~~~~~~l~~~--~~~~G~~~~p~~a~l~~rgl~TL---~lR~~~~~~na~~va~~L~~hp~V 283 (395)
T PRK08114 221 GTAVANARCWEQLREN--SYLMGQMVDADTAYMTSRGLRTL---GVRLRQHEESSLKVAEWLAEHPEV 283 (395)
T ss_pred EEEEcCHHHHHHHHHH--HHhccCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHHHHcCCCE
Confidence 8888888776655432 22345667888877665555544 446777778888888888766543
No 295
>PLN02509 cystathionine beta-lyase
Probab=99.54 E-value=1.4e-12 Score=131.34 Aligned_cols=189 Identities=16% Similarity=0.119 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~Le 229 (442)
+.+.++|+++|++.|.+.++++++|++++..++ .++++||.|+++.+.|+++. ..+...|.+++.++.+|+++++
T Consensus 133 pt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~ 211 (464)
T PLN02509 133 PTRDALESLLAKLDKADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVA 211 (464)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHH
Confidence 578999999999999999999999998876544 67899999999999998865 3455678999999888888888
Q ss_pred HHHHhhcccccc---------------------cccccccccCCCccccccCCC-CCceeEEEEeccccccC----CCcE
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALAT----EGGF 283 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~----~GG~ 283 (442)
+.+...++-... .|+.-++-+...+. ...+.+ ....|+++.|++|.++. .||+
T Consensus 212 ~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~-~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~ 290 (464)
T PLN02509 212 AAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMS-PVLSRPLELGADIVMHSATKFIAGHSDVMAGV 290 (464)
T ss_pred HhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccc-cccCChhhcCCcEEEecCcccccCCCccceeE
Confidence 877543321100 22222221111110 111111 13579999999999964 2688
Q ss_pred EEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 284 CTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 284 v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
++++ +.+.+.++.... ...+.++|+.|+.++..|+.+. .++++.+++.+++.+.|++.|.+
T Consensus 291 v~~~~~~l~~~~~~~~~--~~g~~l~p~~A~l~lr~L~tL~---~R~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 291 LAVKGEKLAKEVYFLQN--SEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred EEeccHHHHHHHHHHHH--hcCCCcCHHHHHHHHhhhhhHH---HHHHHHHHHHHHHHHHHhcCCCc
Confidence 8764 444443332111 1234568999888888887773 47788888999999999876654
No 296
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.54 E-value=7.1e-12 Score=123.41 Aligned_cols=278 Identities=15% Similarity=0.091 Sum_probs=169.6
Q ss_pred HHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH-HHhcCCeEEEecC-----------
Q 013461 155 VHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG-LYLSRSTVVYFKH----------- 222 (442)
Q Consensus 155 ~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~-~~l~g~~v~~~~~----------- 222 (442)
-..+||+.+++++|.+.++.++||+.|...+....++|||+| ..++|+....+ +...|+..+.++.
T Consensus 72 s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p 149 (450)
T TIGR02618 72 NFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIP 149 (450)
T ss_pred cHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCC
Confidence 346999999999999999999999999776667778999987 66788777766 7888886655521
Q ss_pred ----CCHHHHHHHHHhhccc-ccc----------------------------cccccccccCCCcc----c------ccc
Q 013461 223 ----NDMDSLRNTLERVTAD-NKR----------------------------SNSFGVLGRSGRGL----T------EHC 259 (442)
Q Consensus 223 ----~d~~~Le~~l~~~~~~-~~~----------------------------a~~~g~~G~~g~g~----~------~~~ 259 (442)
.|++++++.++..... .+. .|++-++-+..+.. . .+.
T Consensus 150 ~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~ 229 (450)
T TIGR02618 150 FKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYE 229 (450)
T ss_pred CCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhccccccc
Confidence 1788999988753211 100 22222211111100 0 122
Q ss_pred CCCC--------CceeEEEEeccccccC-CCcEEE-cCHHhHHHHHhhCCce---eccCCCcHHHHHHHHHHHHHHhcCh
Q 013461 260 GVPV--------DKIDIVTAAMGHALAT-EGGFCT-GSARVVDHQRLSSSGY---VFSASLPPYLASAAITAIDVLEENP 326 (442)
Q Consensus 260 ~v~~--------~~~diii~S~sK~lg~-~GG~v~-g~~~~i~~l~~~~~~~---~~s~s~~p~~aaaa~aal~~l~~~~ 326 (442)
+.++ .-.|.++.|..|..+. .||+++ +++++++..+.....+ .-.+.+..--+.+...+|+..-+ .
T Consensus 230 ~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~-~ 308 (450)
T TIGR02618 230 DKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD-Y 308 (450)
T ss_pred CCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh-H
Confidence 3222 1358899999999875 489887 8899998877653221 11111121111111223332211 1
Q ss_pred HHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccC------cc
Q 013461 327 DLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR------SM 400 (442)
Q Consensus 327 ~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~------~~ 400 (442)
...++-.++.++|.+.|.+. |+++..+.+++.+++....-....+.+..-.+.++..+..+.||--.-... |.
T Consensus 309 ~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~ 387 (450)
T TIGR02618 309 EYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNV 387 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCC
Confidence 34455555789999999987 999877778889988864311111122333556666666677875432211 11
Q ss_pred cccCCCC--CceEEEecC-CCCHHHHHHHHHHHHHHHHH
Q 013461 401 LDKCRLP--VGIRLFVSA-AHSEADLVKACESLKRISAV 436 (442)
Q Consensus 401 ~~~~~~~--~~iRi~~~~-~~t~eei~~~i~~l~~~~~~ 436 (442)
.+....| .-+|++++. .-|.+++|.+++++..+.++
T Consensus 388 ~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 388 TGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred CCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1111111 349999885 46899999999999887653
No 297
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=1.7e-12 Score=129.49 Aligned_cols=193 Identities=15% Similarity=0.166 Sum_probs=130.0
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEecCC-CHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHN-DMDS 227 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~~~-d~~~ 227 (442)
.+...+||+.+|++.|.+.++.++||++|+..++.+++++||+|+++...|.++... +...|+++.+++.+ |+++
T Consensus 60 nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~ 139 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADE 139 (432)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 356789999999999999999999999999999999999999999999999877765 56679999999875 8889
Q ss_pred HHHHHHhhcccccc---------------------cccccccccCCCccccccCCCCCceeEEEEeccccccC----CCc
Q 013461 228 LRNTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 228 Le~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~----~GG 282 (442)
+++.+++.++.... .|++-++-+.-.+..-....-....||++.|++|.+|. .||
T Consensus 140 l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G 219 (432)
T PRK06702 140 IVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGG 219 (432)
T ss_pred HHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceece
Confidence 98888764432110 22322222211111101111123578999999998863 246
Q ss_pred EEEcCH----------HhH---------------------HHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHH
Q 013461 283 FCTGSA----------RVV---------------------DHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITK 331 (442)
Q Consensus 283 ~v~g~~----------~~i---------------------~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~ 331 (442)
.++... +++ ...+.. ....++++++|+.+..++..|+.+ +.++++
T Consensus 220 ~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~sp~~a~l~~rgL~Tl---~lR~~r 295 (432)
T PRK06702 220 IVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQ-LLRDYGNCMSPFNAYISNIGLETL---HLRMER 295 (432)
T ss_pred EEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHH-HHHHccCCCCHHHHHHHHhccCcH---HHHHHH
Confidence 655321 111 111110 011234578899888776766654 446777
Q ss_pred HHHHHHHHHHhhccCCCc
Q 013461 332 LKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 332 l~~~~~~l~~~L~~~~g~ 349 (442)
.++|...+.+.|++.|.+
T Consensus 296 ~~~Na~~la~~L~~~p~V 313 (432)
T PRK06702 296 HSENALAVAKWLADHERI 313 (432)
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 788999999988876654
No 298
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=3.1e-12 Score=126.51 Aligned_cols=191 Identities=17% Similarity=0.139 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~~~d~~~Le 229 (442)
+.+..||++||++.|.+.+++++||++|+..++.+++++||.|++.++.|+++... +...|.++..++..+.+.++
T Consensus 61 pt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~ 140 (394)
T PRK09028 61 PTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIR 140 (394)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHH
Confidence 44679999999999989999999999999999999999999999988888776542 33457788778766777788
Q ss_pred HHHHhhcccccc-------------------c--ccccccccCCCccccccCCCCCceeEEEEeccccccCC----CcEE
Q 013461 230 NTLERVTADNKR-------------------S--NSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE----GGFC 284 (442)
Q Consensus 230 ~~l~~~~~~~~~-------------------a--~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~----GG~v 284 (442)
+.+.+.++-... + |+.-++-+.-.+..-.......++|+++.|.+|.++.. ||++
T Consensus 141 ~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~ 220 (394)
T PRK09028 141 ELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTA 220 (394)
T ss_pred HhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEE
Confidence 777543321100 2 33222221111111001111235799999999999654 5888
Q ss_pred EcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 285 TGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 285 ~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+++++..+.++... ...+..++|..|......|+.+ .-++++..++...+.+.|++.|.+
T Consensus 221 ~~~~~~~~~l~~~~--~~~G~~~~p~~a~l~~rgl~TL---~lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 221 TANEKHWDQLREHS--YLMGQCTSPDDVYLAMRGLRTL---GVRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred ECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcccCcH---HHHHHHHHHHHHHHHHHHhcCCCc
Confidence 88887766655331 1235567888887766666554 446777788888888888776543
No 299
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.51 E-value=2.6e-12 Score=127.22 Aligned_cols=262 Identities=16% Similarity=0.112 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|+++|.+.++++++|+.++..++. ++++||.|+++.+.|.++... +...|.++++++..|+++++
T Consensus 47 p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le 125 (378)
T TIGR01329 47 PTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVK 125 (378)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHH
Confidence 4578999999999999999999999998887665 789999999998888876543 34578999999888899998
Q ss_pred HHHHhhcccccc-------------------ccccc--ccccCCC--ccccccCCCCCceeEEEEeccccccCC----Cc
Q 013461 230 NTLERVTADNKR-------------------SNSFG--VLGRSGR--GLTEHCGVPVDKIDIVTAAMGHALATE----GG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~-------------------a~~~g--~~G~~g~--g~~~~~~v~~~~~diii~S~sK~lg~~----GG 282 (442)
+.+++.++-... ++..| ++-+.-. +.. .-.+ ....|+++.|++|.++.. ||
T Consensus 126 ~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-~~~l-~~g~Di~v~S~tK~l~G~~~~~~G 203 (378)
T TIGR01329 126 AALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-CNPL-ELGADIVYHSATKFLAGHSDVMAG 203 (378)
T ss_pred HhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-CChh-hcCCcEEEEecceeccCCccceeE
Confidence 887643221100 22222 2211111 110 0011 125699999999999642 68
Q ss_pred EEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-----------
Q 013461 283 FCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS----------- 350 (442)
Q Consensus 283 ~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~----------- 350 (442)
++++ ++++.+.++.... ..+..++|..+..+...++ ..+.++++-.++...+.+.|++.+.+.
T Consensus 204 ~v~~~~~~~~~~~~~~~~--~~G~~~~~~~a~l~~~~l~---tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p 278 (378)
T TIGR01329 204 VLAVKGEEIAKKVYFLQN--STGSGLAPFDCWLLLRGIK---TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHP 278 (378)
T ss_pred EEEeCcHHHHHHHHHHHH--hcCCcCCHHHHHHHHccCC---CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 8766 5555565553321 1244567777655444443 334566777777777777776544321
Q ss_pred ---eec---CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc-------cc----------CCC-
Q 013461 351 ---IAS---NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-------DK----------CRL- 406 (442)
Q Consensus 351 ---~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~-------~~----------~~~- 406 (442)
+.. ...++++.+.++. .....++++. |+..++.++-+...+. .+ ...
T Consensus 279 ~~~l~~~~~~g~~~~~sf~~~~--------~~~~~~~~~~-L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~ 349 (378)
T TIGR01329 279 GFHLHFSQAKGAGSVLSFETGS--------VALSKRLVEA-TKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLP 349 (378)
T ss_pred cHHHHHHhCCCcceEEEEEECC--------HHHHHHHHHh-CcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCC
Confidence 111 1235688888721 1224467764 5665666665443211 00 011
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 407 PVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 407 ~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
+.-||+|+.. ||.+.+++-|++++.+
T Consensus 350 ~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 350 EDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred CCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 2349999987 5566666666666653
No 300
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=5.7e-12 Score=125.66 Aligned_cols=190 Identities=12% Similarity=0.096 Sum_probs=128.0
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~L 228 (442)
.+...+|+++||++.|.+.++++++|++++..++.+++++||.|++..+.|+.... .+...+.+++.++..|++++
T Consensus 59 ~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l 138 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSL 138 (405)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 35568899999999999999999999999999999999999999999888887443 23445778888887788888
Q ss_pred HHHHHhhccccc-------c------------ccccc--cc-ccCC-CccccccCCCCCceeEEEEeccccccCC----C
Q 013461 229 RNTLERVTADNK-------R------------SNSFG--VL-GRSG-RGLTEHCGVPVDKIDIVTAAMGHALATE----G 281 (442)
Q Consensus 229 e~~l~~~~~~~~-------~------------a~~~g--~~-G~~g-~g~~~~~~v~~~~~diii~S~sK~lg~~----G 281 (442)
++.++..++-.. . ++..| ++ ..+. .+.. +..+. ...|+++.|.+|.++.. |
T Consensus 139 ~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-~~pl~-~gaDivv~S~tK~l~g~~~~~~ 216 (405)
T PRK08776 139 ADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-QKPLE-FGADLVLHSTTKYINGHSDVVG 216 (405)
T ss_pred HHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-CCccc-ccCCEEEecCceeecCCCCceE
Confidence 887754322110 0 22222 21 1111 0110 11111 24689999999999643 4
Q ss_pred cEEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 282 GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 282 G~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
|++++ ++++.+.++..... .+..++|+.+..+...++.+ +.++++..++...+.+.|++.|.+
T Consensus 217 G~vv~~~~~l~~~l~~~~~~--~g~~~s~~~a~l~~~gl~tl---~~r~~~~~~na~~la~~L~~~p~v 280 (405)
T PRK08776 217 GAVVARDAELHQQLVWWANA--LGLTGSPFDAFLTLRGLRTL---DARLRVHQENADAIAALLDGHAAV 280 (405)
T ss_pred EEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhCcH---HHHHHHHHHHHHHHHHHHHcCCCe
Confidence 76655 67777766543221 22346788888776666655 447778888888888888776543
No 301
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.51 E-value=4.1e-12 Score=125.02 Aligned_cols=265 Identities=19% Similarity=0.165 Sum_probs=164.0
Q ss_pred CcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH----hcCCeEEEecCCCHHH
Q 013461 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDS 227 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~----l~g~~v~~~~~~d~~~ 227 (442)
..+-...||++||++.|.+.+++|+||..|+..++.+++++||.|++.+..|+.+..-++ ..|.++.+++..|+++
T Consensus 53 gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~ 132 (386)
T PF01053_consen 53 GNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA 132 (386)
T ss_dssp C-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred ccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence 357789999999999999999999999999999999999999999998888888765544 4688999998889999
Q ss_pred HHHHHHhhccccc-------c------------ccccc-c--cccCCCccccccCCCC--CceeEEEEeccccccCC---
Q 013461 228 LRNTLERVTADNK-------R------------SNSFG-V--LGRSGRGLTEHCGVPV--DKIDIVTAAMGHALATE--- 280 (442)
Q Consensus 228 Le~~l~~~~~~~~-------~------------a~~~g-~--~G~~g~g~~~~~~v~~--~~~diii~S~sK~lg~~--- 280 (442)
+++.+++.++-.- . ++..| + +-+.-.+.. +...| ..+||++.|++|.++..
T Consensus 133 l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp--~~~~pL~~GaDivv~S~TKyl~Ghsdv 210 (386)
T PF01053_consen 133 LEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATP--YNQNPLELGADIVVHSATKYLSGHSDV 210 (386)
T ss_dssp HHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHT--TTC-GGGGT-SEEEEETTTTTTTSSSE
T ss_pred HHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccce--eeeccCcCCceEEEeeccccccCCcce
Confidence 9999887443210 0 44443 2 222111111 22222 34799999999999632
Q ss_pred -CcEEEcC--HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-eecC--
Q 013461 281 -GGFCTGS--ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IASN-- 354 (442)
Q Consensus 281 -GG~v~g~--~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~-- 354 (442)
||.++.+ +++.+.++... ..++..++|..|......++.+ +.++++..+++..+.+.|.+.|.+. +.-+
T Consensus 211 ~~G~vv~~~~~~~~~~l~~~~--~~~G~~~~p~da~ll~rgl~Tl---~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl 285 (386)
T PF01053_consen 211 MGGAVVVNGSSELYDRLREFR--RLLGATLSPFDAWLLLRGLRTL---PLRMERQNENAEALAEFLEEHPKVKRVYYPGL 285 (386)
T ss_dssp -EEEEEESSHHHHHHHHHHHH--HHHT-B--HHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTSTTEEEEEETTS
T ss_pred eeEEEEECchhhhhhhhcchh--hhcCccchHHHHHHHhcCCCcH---HHHHHHHHHHHHHHHHHHHhCCCCCeEEEccc
Confidence 5887755 47777665432 3455667888877666665544 4477888888888988888765543 2111
Q ss_pred --------------CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc-------cc----------
Q 013461 355 --------------PESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML-------DK---------- 403 (442)
Q Consensus 355 --------------~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~-------~~---------- 403 (442)
..++++.+.++.. ...+.++.+. |+--++.++-+...+. .+
T Consensus 286 ~s~p~~~~~~~~~~g~ggl~sf~l~~~-------~~~~~~f~~~-l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~ 357 (386)
T PF01053_consen 286 PSHPQHELAKRQMSGGGGLLSFELKGG-------EEAARRFLDA-LKLFSIAPSLGGVESLISHPASTSHRSLSPEERAE 357 (386)
T ss_dssp TTSTTHHHHHHHCSSCTSEEEEEESSH-------HHHHHHHHHH--SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHH
T ss_pred ccccceeeeeecccccCceeEEEeccc-------hhhhHhHHhh-hhhHhhhhhcCCcccccccccchhhccCChhhhhc
Confidence 2356889988531 1234556653 4321111111111100 00
Q ss_pred -CCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 404 -CRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 404 -~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
+-.+.-||+|+.. ||.+.+++-|+++++
T Consensus 358 ~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 358 AGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp TTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred cCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 1112349999986 677777887777653
No 302
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.51 E-value=1e-11 Score=111.24 Aligned_cols=286 Identities=17% Similarity=0.174 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHhcCCCC-----Cc-cCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCC
Q 013461 127 KLLESCTSALEKYGVGS-----CG-PRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADE 200 (442)
Q Consensus 127 ~v~ea~~~~l~~~g~~~-----~~-~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~ 200 (442)
.+.+++.+++.+||.|+ |+ .|.-.-+.+...++-+.+|+|+|.+.+-++.+.-++-.+++.+++++||.|++|.
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~ 107 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDS 107 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcC
Confidence 34556667777776554 31 2222234445566667799999999999999988999999999999999999999
Q ss_pred CchHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhcccc---cc----cccccccc-----------------
Q 013461 201 GVHWGIQNGLYLSRSTVVYFKHN-------DMDSLRNTLERVTADN---KR----SNSFGVLG----------------- 249 (442)
Q Consensus 201 ~~h~s~~~~~~l~g~~v~~~~~~-------d~~~Le~~l~~~~~~~---~~----a~~~g~~G----------------- 249 (442)
..|.++.-++...|.++..+|+. +++...+.+++..++. +. .|.=|-+|
T Consensus 108 ~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gv 187 (382)
T COG1103 108 LAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGV 187 (382)
T ss_pred cchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCC
Confidence 99999999999999999988853 4666666666654432 11 11111111
Q ss_pred ------cCCCccccccCCCCCceeEEEEeccccccCCC--cEEEcCHHhHHHHHhhC-Cce------e--ccCCCcHHHH
Q 013461 250 ------RSGRGLTEHCGVPVDKIDIVTAAMGHALATEG--GFCTGSARVVDHQRLSS-SGY------V--FSASLPPYLA 312 (442)
Q Consensus 250 ------~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G--G~v~g~~~~i~~l~~~~-~~~------~--~s~s~~p~~a 312 (442)
.-..|-..--+- .-..|++++|-+|+++..| |.+..+.++.+..-..+ ..+ . .+....|+..
T Consensus 188 PlllN~AYt~Grmpvs~k-e~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivT 266 (382)
T COG1103 188 PLLLNCAYTVGRMPVSGK-EIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVT 266 (382)
T ss_pred ceEeecceeecccccccc-ccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHH
Confidence 000011110111 1346999999999997655 89999999888654433 211 1 1222234432
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEEEEEecCCCCCchhhHHHHHHHHHH------
Q 013461 313 SAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIVFLILEKSTGSMKNDLQLLEDIADW------ 384 (442)
Q Consensus 313 aaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~------ 384 (442)
. .+++-...+.-...+.--++.++|.+.|.++.|+.-.+. ...-++.+..+. ..+++++
T Consensus 267 l--mASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~-----------f~eIakk~~r~gy 333 (382)
T COG1103 267 L--MASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPV-----------FHEIAKKHKRKGY 333 (382)
T ss_pred H--HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCch-----------HHHHHHhCcCCce
Confidence 2 223322221111233334567788888888755654432 223344443211 1223322
Q ss_pred ----HHHhCCEEE-eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 385 ----ALKEDGVFV-VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 385 ----~L~~~GV~v-~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
-|+++||.- .++ . ...+.+|+- .+++|+++..++++++++.+
T Consensus 334 FlY~ELK~RgI~GI~~G----~-----Tk~~K~svy-Gl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 334 FLYEELKKRGIHGIQPG----Q-----TKYFKLSVY-GLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred eeHHHHHhcCccccccC----c-----eeEEEEEee-cCCHHHHHHHHHHHHHHHHh
Confidence 244445431 111 1 123777764 58999999999999998765
No 303
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=4e-12 Score=125.76 Aligned_cols=189 Identities=12% Similarity=0.056 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||++||++.|.+.++++++|++|+..++.+++++||.|+++.+.|++....+ ...|.++.+++..|+++++
T Consensus 53 pt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~ 132 (388)
T PRK08861 53 PNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALD 132 (388)
T ss_pred chHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHH
Confidence 456899999999999999999999999999999999999999999999888755432 2346788888777888888
Q ss_pred HHHHhhcccccc---------------------ccccccc-ccCC-CccccccCCCCCceeEEEEeccccccCC----Cc
Q 013461 230 NTLERVTADNKR---------------------SNSFGVL-GRSG-RGLTEHCGVPVDKIDIVTAAMGHALATE----GG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~-G~~g-~g~~~~~~v~~~~~diii~S~sK~lg~~----GG 282 (442)
+.++..++-... .++.-++ ..+. .+.. ...++ .++|+++.|++|.++.. ||
T Consensus 133 ~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~-~~pl~-~GaDivv~S~tK~l~G~~d~~gG 210 (388)
T PRK08861 133 AALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL-QKPLE-LGADFVIHSTTKYINGHSDVIGG 210 (388)
T ss_pred HhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-CCCcc-cCCCEEEeecceeccCCCcceeE
Confidence 877543321100 2222111 1111 1111 11121 35799999999999642 68
Q ss_pred EEEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+++++ +++.+.++... ...+..++|+.+...+..|+.+ .-++++..+++..+.+.|++.|.+
T Consensus 211 ~i~~~~~~~~~~~~~~~--~~~G~~~~p~~a~l~~rgl~Tl---~lR~~~~~~~a~~~a~~L~~~p~v 273 (388)
T PRK08861 211 VLITKTKEHAEELAWWG--NCIGATGTPFDSYMTLRGIRTL---GARMRVHEESAQQILAYLQTQSLV 273 (388)
T ss_pred EEEecHHHHHHHHHHHH--hccCCCCChHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHhCCCe
Confidence 88774 56666555332 2345667888877665555544 346677777888888888765543
No 304
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=4.3e-12 Score=127.24 Aligned_cols=191 Identities=18% Similarity=0.152 Sum_probs=120.4
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEec-CCCHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFK-HNDMDS 227 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~-~~d~~~ 227 (442)
.+.+.+||+++|++.|.+.++++++|+.|+..++.+++++||.|+++...|.++... +...|.+++.++ ..|+++
T Consensus 68 ~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred CchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 466789999999999999999999999999999999999999999988888776543 333567777774 345666
Q ss_pred HHHHHHhhcccccc-------------------ccccc--ccccC--CCccccccCCCCCceeEEEEeccccccCCC---
Q 013461 228 LRNTLERVTADNKR-------------------SNSFG--VLGRS--GRGLTEHCGVPVDKIDIVTAAMGHALATEG--- 281 (442)
Q Consensus 228 Le~~l~~~~~~~~~-------------------a~~~g--~~G~~--g~g~~~~~~v~~~~~diii~S~sK~lg~~G--- 281 (442)
+++.+++.+.-... ++..| ++-+. +.+.. ...+ ..++|+++.|++|.+|..|
T Consensus 148 l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~pl-~~GaDivv~S~tK~lgg~G~~i 225 (436)
T PRK07812 148 WRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRPL-EHGADIVVHSATKYLGGHGTAI 225 (436)
T ss_pred HHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCch-hcCCCEEEEecccccCCCCCeE
Confidence 66655432211100 22222 11111 11111 0111 2357999999999998655
Q ss_pred -cEEEcCHH------------------------------hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHH
Q 013461 282 -GFCTGSAR------------------------------VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLIT 330 (442)
Q Consensus 282 -G~v~g~~~------------------------------~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~ 330 (442)
|.++.+.. .+...+... ....++.++|..|...+..++.+ +.+++
T Consensus 226 ~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~l~p~~a~l~~rgl~tL---~~R~~ 301 (436)
T PRK07812 226 AGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQL-LRDLGSAISPFNAFLIAQGLETL---SLRIE 301 (436)
T ss_pred EEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHH-HHhcCCCCCHHHHHHHhcCcCcH---HHHHH
Confidence 44554321 010111000 01234567888877665555444 45777
Q ss_pred HHHHHHHHHHHhhccCCCc
Q 013461 331 KLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 331 ~l~~~~~~l~~~L~~~~g~ 349 (442)
+-.++...+.+.|++.|++
T Consensus 302 ~~~~nA~~la~~L~~~p~v 320 (436)
T PRK07812 302 RHVANAQRVAEFLEARDEV 320 (436)
T ss_pred HHHHHHHHHHHHHHhCCCc
Confidence 8888888898988877654
No 305
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.49 E-value=2.8e-12 Score=138.18 Aligned_cols=282 Identities=13% Similarity=0.114 Sum_probs=175.4
Q ss_pred cccCcHHHHHHHHHHHhhhCCCcEEEEcchH----HHHHhhhhhhccC-CC----EEEeCCCchHHHHHHHHhcCCeEEE
Q 013461 149 FYGTIDVHLDCEARIAKFLGTPDSILYSYGL----STMFSAIPCFCKK-GD----LIVADEGVHWGIQNGLYLSRSTVVY 219 (442)
Q Consensus 149 ~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~----~a~~~ai~a~~~~-gd----~Vi~~~~~h~s~~~~~~l~g~~v~~ 219 (442)
..|..+...++++.+++++|.+.+++..+++ +++..+++++.++ || +|+++...|++....+...|.+++.
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 4567788899999999999998888877665 7888999998865 88 9999999999988888888999998
Q ss_pred ecCC-----CHHHHHHHHHhhcccccc----------------------ccccccccc-CCCccccccCCC---CCceeE
Q 013461 220 FKHN-----DMDSLRNTLERVTADNKR----------------------SNSFGVLGR-SGRGLTEHCGVP---VDKIDI 268 (442)
Q Consensus 220 ~~~~-----d~~~Le~~l~~~~~~~~~----------------------a~~~g~~G~-~g~g~~~~~~v~---~~~~di 268 (442)
++.+ |+++|++.+++++++.+. +|..|.+-- +|.....+.++. ..++|+
T Consensus 643 v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~ 722 (993)
T PLN02414 643 VGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADV 722 (993)
T ss_pred eccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCE
Confidence 8763 789999999864432211 333332100 111111111221 235799
Q ss_pred EEEeccccccC------CC-cEEEcCHHhHHHHHhhC----Cce--------eccCCCcHH-HHHHHHHHHHHHhc-C--
Q 013461 269 VTAAMGHALAT------EG-GFCTGSARVVDHQRLSS----SGY--------VFSASLPPY-LASAAITAIDVLEE-N-- 325 (442)
Q Consensus 269 ii~S~sK~lg~------~G-G~v~g~~~~i~~l~~~~----~~~--------~~s~s~~p~-~aaaa~aal~~l~~-~-- 325 (442)
+++|.+|+|+. +| |+++.++.++..+-... .++ +.+.+..++ .+..+..++.++.. .
T Consensus 723 ~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~ 802 (993)
T PLN02414 723 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSE 802 (993)
T ss_pred EEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHh
Confidence 99999998852 12 78888887766553210 000 111111233 12233344544442 1
Q ss_pred --hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc
Q 013461 326 --PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK 403 (442)
Q Consensus 326 --~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~ 403 (442)
.+..++...+..|+.+.|.+..++.+.+ +..++++=.+-.-..-.+.......+++++++ +.||.......| +
T Consensus 803 Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~-~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Gihapt~~~p-v-- 877 (993)
T PLN02414 803 GLTDASKIAILNANYMAKRLEGHYPVLFRG-KNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHAPTMSWP-V-- 877 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccccC-CCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEEeeeccc-c--
Confidence 2336677788999999997643444432 22343332211100000000011346888766 669986553322 1
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 404 CRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 404 ~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+..+|++++-..|++|||+++++++.+..+..
T Consensus 878 ---~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 878 ---PGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred ---CCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 35699999999999999999999998887764
No 306
>PRK05939 hypothetical protein; Provisional
Probab=99.49 E-value=3e-12 Score=127.35 Aligned_cols=193 Identities=13% Similarity=0.091 Sum_probs=125.1
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHH---HHHHHHhcCCeEEEecCCCHHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWG---IQNGLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s---~~~~~~l~g~~v~~~~~~d~~~Le 229 (442)
.+...+||+++|++.|.+.++++++|+.|+..++.+++++||.|++++..|++ +...+...|.++..++..|+++++
T Consensus 46 ~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~ 125 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVA 125 (397)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHH
Confidence 46678999999999999999999999999999999999999999999887764 344566679999999988899998
Q ss_pred HHHHhhcccccc---------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCCC----cEE
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG----GFC 284 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G----G~v 284 (442)
+.+...++-... .|+.-++-+.-.+....++....++|+++.|++|.++..| |.+
T Consensus 126 ~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v 205 (397)
T PRK05939 126 AAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAV 205 (397)
T ss_pred HhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccccCccccCCEEEEecCeecccCCCCeEEEEE
Confidence 887653321100 2222222211111111122222358999999999998654 434
Q ss_pred EcCHH--------h-------------HHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhh
Q 013461 285 TGSAR--------V-------------VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGL 343 (442)
Q Consensus 285 ~g~~~--------~-------------i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L 343 (442)
+.+.. + +..++... ...+.+.++|..+......++.+ ..++++..++...+.+.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~p~~a~l~~rgl~tl---~~R~~~~~~na~~la~~L 281 (397)
T PRK05939 206 TDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKG-LRDMGATLSSEAAHRIAIGAETL---ALRVDRSCSNALALAQFL 281 (397)
T ss_pred ecCcccccccccchhhhhhccchhhHHHHHHHHHH-HHhcCCCCCHHHHHHHHcCcCcH---HHHHHHHHHHHHHHHHHH
Confidence 32221 1 11111110 01235567788776655555444 346666777888888888
Q ss_pred ccCCCc
Q 013461 344 SDIHGL 349 (442)
Q Consensus 344 ~~~~g~ 349 (442)
++.|.+
T Consensus 282 ~~~p~V 287 (397)
T PRK05939 282 EAHPKV 287 (397)
T ss_pred HhCCCc
Confidence 765543
No 307
>PRK02769 histidine decarboxylase; Provisional
Probab=99.49 E-value=1.9e-11 Score=120.58 Aligned_cols=277 Identities=13% Similarity=0.072 Sum_probs=181.2
Q ss_pred HHHHHHHHH-HhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--c--EEEEcchHHHHHhhhhhh--ccCCCEEEeCC
Q 013461 128 LLESCTSAL-EKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--D--SILYSYGLSTMFSAIPCF--CKKGDLIVADE 200 (442)
Q Consensus 128 v~ea~~~~l-~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~--~i~~~sG~~a~~~ai~a~--~~~gd~Vi~~~ 200 (442)
..+.+.... .++|..+..+.....+.+...+..+.+|+++|.+ + .+++++|+++|..++.+. ..++++|++++
T Consensus 38 ~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~ 117 (380)
T PRK02769 38 ALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSK 117 (380)
T ss_pred HHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCC
Confidence 344444443 4456555444433346678888999999999964 3 377888899998776544 25789999999
Q ss_pred CchHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhcccccc------------------------cccc---ccc
Q 013461 201 GVHWGIQNGLYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR------------------------SNSF---GVL 248 (442)
Q Consensus 201 ~~h~s~~~~~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~------------------------a~~~---g~~ 248 (442)
..|.++.++++..+.....++. .|+++|++.+++....... .++. .+.
T Consensus 118 ~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lH 197 (380)
T PRK02769 118 DTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIH 197 (380)
T ss_pred CceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEE
Confidence 9999999998887766555543 3788999888765211111 2321 111
Q ss_pred --ccCCCcccc------ccCCCCCceeEEEEeccccccC-CC-cEEEcCHHhHHHHHhhCCce------eccCCCcHHHH
Q 013461 249 --GRSGRGLTE------HCGVPVDKIDIVTAAMGHALAT-EG-GFCTGSARVVDHQRLSSSGY------VFSASLPPYLA 312 (442)
Q Consensus 249 --G~~g~g~~~------~~~v~~~~~diii~S~sK~lg~-~G-G~v~g~~~~i~~l~~~~~~~------~~s~s~~p~~a 312 (442)
+..|.+... .++.. .++|.++.|.+|.+|. .| |+++.+++..+.+... ..| .+.++-+...+
T Consensus 198 VDaA~gg~~~p~~~~~~~~d~~-~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~-~~yl~~~d~t~~GSR~g~~~ 275 (380)
T PRK02769 198 ADAALSGMILPFVNNPPPFSFA-DGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVD-VDYIGSRDQTISGSRNGHTA 275 (380)
T ss_pred EEecccceeecccCccccCCcc-CCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccC-ccccCCCCCCccCCCCcHHH
Confidence 222333332 13332 2689999999999973 34 7888887766654321 122 23334444555
Q ss_pred HHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCC
Q 013461 313 SAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDG 390 (442)
Q Consensus 313 aaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~G 390 (442)
++..++|+.+.. ..+..++..++.+++.+.|++. |+++...+.+.++.+..+. + ++ . + |
T Consensus 276 l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~-------~-----~~----~-~-~ 336 (380)
T PRK02769 276 LLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPS-------E-----RI----W-K-K 336 (380)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCC-------H-----HH----H-h-C
Confidence 566677877653 3567788899999999999885 8888877788877764311 1 11 1 2 5
Q ss_pred EEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 391 VFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 391 V~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
..+.+.. ..+|+++...+|++.+|++++-|.....
T Consensus 337 w~l~~~~----------~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 337 WHLATSG----------NQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred eeEcccC----------CEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 5444321 2499999999999999999999887765
No 308
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.49 E-value=2.4e-11 Score=120.66 Aligned_cols=293 Identities=15% Similarity=0.073 Sum_probs=174.2
Q ss_pred ChH-HHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC---cEEEEc-chHHHHHhhhhhhccC-CCEEEe
Q 013461 125 HEK-LLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP---DSILYS-YGLSTMFSAIPCFCKK-GDLIVA 198 (442)
Q Consensus 125 ~p~-v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e---~~i~~~-sG~~a~~~ai~a~~~~-gd~Vi~ 198 (442)
+|+ |.+++.+... +.. +|.- -..+...+.++.+++++|.+ ++++++ +|+.++..++..+.++ ++.|+.
T Consensus 24 ~~~~v~~a~~~~~~--~~~---hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~ 97 (378)
T PRK03080 24 RPGWQLEALADALL--GRS---HRQK-PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA 97 (378)
T ss_pred ChHHHHHHHHhhhc--ccC---cCCH-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE
Confidence 577 8888875432 111 2211 13577889999999999962 466675 8899999999888775 555655
Q ss_pred CCCchHHHHHH-H-HhcCC-eEEEecCC--CHHHHHHHHHhhcccccc---ccccccc------cc---------CCCcc
Q 013461 199 DEGVHWGIQNG-L-YLSRS-TVVYFKHN--DMDSLRNTLERVTADNKR---SNSFGVL------GR---------SGRGL 255 (442)
Q Consensus 199 ~~~~h~s~~~~-~-~l~g~-~v~~~~~~--d~~~Le~~l~~~~~~~~~---a~~~g~~------G~---------~g~g~ 255 (442)
...|++-+.. + +..|. ++..++.. ..-++++ ++. ++.... ....|+. ++ ++...
T Consensus 98 -~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~-i~~-~~~V~~~h~~t~tG~~~pi~~I~~~~~g~~~vVDa~qs 174 (378)
T PRK03080 98 -WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSA-VDF-DRDVVFTWNGTTTGVRVPVARWIGADREGLTICDATSA 174 (378)
T ss_pred -eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhh-cCC-CCCEEEEecCCccceeccchhhccccCCCeEEEecccc
Confidence 5788775543 2 34566 66665532 1112332 221 111111 1111211 11 11111
Q ss_pred ccccCCCCCceeEEEEeccccccC-CC-cEEEcCHHhHHHHHhhCCc-----e------------ecc---CCCcHHH-H
Q 013461 256 TEHCGVPVDKIDIVTAAMGHALAT-EG-GFCTGSARVVDHQRLSSSG-----Y------------VFS---ASLPPYL-A 312 (442)
Q Consensus 256 ~~~~~v~~~~~diii~S~sK~lg~-~G-G~v~g~~~~i~~l~~~~~~-----~------------~~s---~s~~p~~-a 312 (442)
..+..++.+++|++++|..|+|+. .| |+++.+++.++.+.....+ + .+. ...|+.. .
T Consensus 175 ~G~~pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i 254 (378)
T PRK03080 175 AFALPLDWSKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTV 254 (378)
T ss_pred cccCCCCHHHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHH
Confidence 122334445689999999999964 56 9999999998876542100 0 111 1123333 3
Q ss_pred HHHHHHHHHHhcC---hHHHHHHHHHHHHHHHhhccCCCceeecC---CCC-CEEEEEecCCCCCchhhHHHHHHHHHHH
Q 013461 313 SAAITAIDVLEEN---PDLITKLKKNTAILRTGLSDIHGLSIASN---PES-PIVFLILEKSTGSMKNDLQLLEDIADWA 385 (442)
Q Consensus 313 aaa~aal~~l~~~---~~~~~~l~~~~~~l~~~L~~~~g~~~~~~---~~~-~i~~~~~~~~~~~~~~~~~~~~~i~~~~ 385 (442)
.+..++++.+.+. +.+.++.+++.+++++.|++++++.+... ..+ .++.+.+++. +.....++...+
T Consensus 255 ~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~------~~~~~~~~~~~l 328 (378)
T PRK03080 255 EDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA------QAAVDAAAVAKL 328 (378)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc------hHHHHHHHHHHH
Confidence 3445788887652 45678888999999999998855655421 123 4666665320 000112345555
Q ss_pred HHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 386 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 386 L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+++ |+.+..+.+.. .+..+|++++..+|++||++++++|++++++..
T Consensus 329 ~~~-~i~v~~g~~~~-----~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 329 LRE-NGAVDIEPYRD-----APNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred HHc-CCeeccccccC-----CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 554 78776544321 124599999999999999999999999877654
No 309
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.48 E-value=9e-12 Score=123.43 Aligned_cols=189 Identities=13% Similarity=0.077 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~~~d~~~Le 229 (442)
+...+|++.+|++.|.+.++++++|++|+..++.+++++||.|++..+.|++....+ ...+.++..++..|+++++
T Consensus 51 p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~ 130 (382)
T TIGR02080 51 PTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALR 130 (382)
T ss_pred chHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHH
Confidence 456899999999999999999999999999999999999999999999998654422 2234566666666788888
Q ss_pred HHHHhhcccccc---------------------cccccccccCCC--ccccccCCCCCceeEEEEeccccccC----CCc
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGR--GLTEHCGVPVDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~--g~~~~~~v~~~~~diii~S~sK~lg~----~GG 282 (442)
+.+++.++-... .++.-++-+... +.. ...+. ...|+++.|++|.++. .+|
T Consensus 131 ~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-~~pl~-~gaDivv~S~sK~l~G~~~~~~G 208 (382)
T TIGR02080 131 AALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL-QNPLA-LGADLVLHSCTKYLNGHSDVIAG 208 (382)
T ss_pred HhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc-CCchh-hCCCEEEeecceeccCCCCceeE
Confidence 877543221100 222212211111 110 11111 2468999999999963 258
Q ss_pred EEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
++++ ++++++.++.... ..+..++|+.+..++..++.+ ..++++..++...+.+.|++.|.+
T Consensus 209 ~i~~~~~~~~~~l~~~~~--~~g~~~sp~~a~l~lr~l~tl---~~R~~~~~~na~~~a~~L~~~p~v 271 (382)
T TIGR02080 209 AVIAKDPQVAEELAWWAN--NLGVTGGAFDSYLTLRGLRTL---VARMRLQQRNAQAIVEYLQTQPLV 271 (382)
T ss_pred EEEeCCHHHHHHHHHHHH--ccCCCCCHHHHHHHHcccchH---HHHHHHHHHHHHHHHHHHHhCCCe
Confidence 7655 6777777654321 235567888887776666555 335667778888888888765443
No 310
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.48 E-value=2.1e-11 Score=122.07 Aligned_cols=303 Identities=12% Similarity=0.074 Sum_probs=186.3
Q ss_pred CChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHHHHHHhhhCCC----cEEE--EcchHHHHHhhhhhhc----c-
Q 013461 124 GHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP----DSIL--YSYGLSTMFSAIPCFC----K- 191 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e----~~i~--~~sG~~a~~~ai~a~~----~- 191 (442)
.+|++.+.+.+.+.. +++.++.+ ...+..++..+.+|+++|.+ +.++ +++|++||..++.+.. .
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~----~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~ 128 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYP----QTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKR 128 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCc----cHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHH
Confidence 468899999998874 45444332 23478888999999999965 3444 5888999988875542 1
Q ss_pred ---C-----CCEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccccc----------------
Q 013461 192 ---K-----GDLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADNKR---------------- 241 (442)
Q Consensus 192 ---~-----gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~~~---------------- 241 (442)
. +..|++.+..|.++.++++..|.++.+++.+ |+++|++.+++.+.-...
T Consensus 129 ~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I 208 (431)
T TIGR01788 129 MEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKAL 208 (431)
T ss_pred HHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHH
Confidence 1 2379999999999999998888887776642 577888887654321111
Q ss_pred -----cc------ccccc--ccCCCcc----cccc--CCCCCceeEEEEeccccc-cCCC-cEEEcCHH--hHHHHHhh-
Q 013461 242 -----SN------SFGVL--GRSGRGL----TEHC--GVPVDKIDIVTAAMGHAL-ATEG-GFCTGSAR--VVDHQRLS- 297 (442)
Q Consensus 242 -----a~------~~g~~--G~~g~g~----~~~~--~v~~~~~diii~S~sK~l-g~~G-G~v~g~~~--~i~~l~~~- 297 (442)
.+ ++.+. +..|.+. .... ++....+|.++.|.+|.+ |..| |+++.++. +.+.+...
T Consensus 209 ~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~ 288 (431)
T TIGR01788 209 NDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHV 288 (431)
T ss_pred HHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecc
Confidence 22 22121 1111111 1111 122345788999999987 7655 77766543 32332211
Q ss_pred ---CC---ceeccCCCcHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEEEecCCC
Q 013461 298 ---SS---GYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFLILEKST 368 (442)
Q Consensus 298 ---~~---~~~~s~s~~p~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~~~i~~~~~~~~~ 368 (442)
+. .+....+-+...+......+..+- ...++.++..++.++|.+.|++.+++++..+ +..+++.+.+....
T Consensus 289 ~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~ 368 (431)
T TIGR01788 289 NYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA 368 (431)
T ss_pred cccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC
Confidence 00 011111112112222333444332 2346778888999999999999888998865 67889988885421
Q ss_pred CCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 369 GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 369 ~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
. ......++.++ |.++|+.+.....|..-.+ -..+|+++...++++.++.+++.|++++.++
T Consensus 369 ~----~~~~~~~l~~~-L~~~G~~~~~~~~p~~~~~--~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 369 D----PGYTLYDLSHR-LRERGWIVPAYTLPKNAED--IVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred C----CCcCHHHHHHH-HHHCCCcccCCCCCCccCC--eEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 0 01123467764 6677987644333221000 0128999988899999999999999887653
No 311
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.48 E-value=3.8e-12 Score=127.62 Aligned_cols=192 Identities=18% Similarity=0.202 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH----hcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~----l~g~~v~~~~~~d~~~Le 229 (442)
+...+||++||++.|.+.++++++|++|+..++.+++++||.|+++.+.|+.....+. ..|.++.+++.+|+++++
T Consensus 58 pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le 137 (425)
T PRK06084 58 PTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALE 137 (425)
T ss_pred chHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHH
Confidence 4467999999999999999999999999999999999999999998887765554432 246777788888999999
Q ss_pred HHHHhhcccccc---------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCC----CcEE
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE----GGFC 284 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~----GG~v 284 (442)
+.+++.++-... .+++-++-+.-.+.......-....|+++.|++|.+|.. ||++
T Consensus 138 ~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v 217 (425)
T PRK06084 138 ALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIV 217 (425)
T ss_pred HHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEE
Confidence 988653321100 222222211111110001101134799999999999743 5777
Q ss_pred EcCHHh--HHH----------------------------H---HhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHH
Q 013461 285 TGSARV--VDH----------------------------Q---RLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITK 331 (442)
Q Consensus 285 ~g~~~~--i~~----------------------------l---~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~ 331 (442)
+.+... .+. . +... .-.+++.++|+.|+.++..++.+ +.++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~l~~~~a~l~lrgl~tl---~~R~~~ 293 (425)
T PRK06084 218 VDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVP-LRNMGAALSPFNAFLILQGLETL---ALRMER 293 (425)
T ss_pred EeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHH-HHhcCCCCCHHHHHHHHcCcCcH---HHHHHH
Confidence 653321 000 0 0000 01235667899888776666555 457777
Q ss_pred HHHHHHHHHHhhccCCCc
Q 013461 332 LKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 332 l~~~~~~l~~~L~~~~g~ 349 (442)
-+++...+.+.|++.|++
T Consensus 294 ~~~na~~la~~L~~~p~v 311 (425)
T PRK06084 294 HTENALKVARYLQQHPQV 311 (425)
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 888888888888877654
No 312
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.47 E-value=9.9e-12 Score=117.45 Aligned_cols=271 Identities=16% Similarity=0.195 Sum_probs=171.1
Q ss_pred HHHHHHHHHhhhC----------CCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHh-cCCeEEEecC--
Q 013461 156 HLDCEARIAKFLG----------TPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYL-SRSTVVYFKH-- 222 (442)
Q Consensus 156 ~~~le~~lA~~~g----------~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l-~g~~v~~~~~-- 222 (442)
+..+++.+|+|++ .++.+++++++.|+.....+++.|||.-+++.|+|++.-.-++. .|.+++++..
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~S 202 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSS 202 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeec
Confidence 3567777777763 35788888899999999999999999999999999987655543 4667766542
Q ss_pred -C----CHHHHHHHHHhhcccccc----------------------------------------cccccccccC-CCccc
Q 013461 223 -N----DMDSLRNTLERVTADNKR----------------------------------------SNSFGVLGRS-GRGLT 256 (442)
Q Consensus 223 -~----d~~~Le~~l~~~~~~~~~----------------------------------------a~~~g~~G~~-g~g~~ 256 (442)
| +.+.||..+++..+...+ -++--++++. .+.+.
T Consensus 203 s~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ 282 (471)
T KOG0256|consen 203 SNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVL 282 (471)
T ss_pred CCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHH
Confidence 2 478899888775443222 1111223322 12222
Q ss_pred ccc---CCCCCceeEEEEeccccccCCC---cEEEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc-ChHH
Q 013461 257 EHC---GVPVDKIDIVTAAMGHALATEG---GFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-NPDL 328 (442)
Q Consensus 257 ~~~---~v~~~~~diii~S~sK~lg~~G---G~v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~-~~~~ 328 (442)
+.. ...++ ..=++=|+||-+|.+| |.+... ++++...+..+ .|..-.+.....++..+.--+..++ .++.
T Consensus 283 ev~~~~~~~~~-rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms-sf~~vSs~tQ~~la~LLSD~~f~~~yl~en 360 (471)
T KOG0256|consen 283 EVRKDPHLDPD-RVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS-SFGLVSSQTQYLLASLLSDEEFTREYLREN 360 (471)
T ss_pred HHhhccccCCC-cEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh-hccCCcHHHHHHHHHHhchHHHHHHHHHHH
Confidence 221 11333 3445678999999988 777664 55666555432 2211112223333333333222222 2456
Q ss_pred HHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCC--CCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCC
Q 013461 329 ITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKST--GSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL 406 (442)
Q Consensus 329 ~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~ 406 (442)
.++++.+.+++.++|+++ |+++.....+-++|+.+..-- .+.+.+. ++.++.+.+-++.++|+..+. |.-
T Consensus 361 ~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~s~tfe~El----~Lw~~i~~~vklnlSpG~s~~---C~E 432 (471)
T KOG0256|consen 361 NKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLTSLTFEGEL----ELWERILDNVKLNLSPGSSCH---CHE 432 (471)
T ss_pred HHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHhcCcCChHHHH----HHHHHHHHhhccccCCCCcce---ecC
Confidence 788899999999999998 999886556667777765321 1222222 345556666689999987653 333
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 407 PVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 407 ~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
|++.|+++.. +.++.++-+.++|++++.+-
T Consensus 433 pGWFRvcFAn-~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 433 PGWFRVCFAN-MSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred CCeEEEEecc-CCHHHHHHHHHHHHHHHHhh
Confidence 6789999975 45566666999999887654
No 313
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.47 E-value=3.1e-11 Score=118.74 Aligned_cols=294 Identities=13% Similarity=0.055 Sum_probs=173.8
Q ss_pred CChHHHHHHHHHHHhcCC-CCCccCccccCc---HHHHHHHHHHHhhhCC-C--cEEEE-cchHHHHHhhhhhhccCCCE
Q 013461 124 GHEKLLESCTSALEKYGV-GSCGPRGFYGTI---DVHLDCEARIAKFLGT-P--DSILY-SYGLSTMFSAIPCFCKKGDL 195 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~g~-~~~~~~~~~g~~---~~~~~le~~lA~~~g~-e--~~i~~-~sG~~a~~~ai~a~~~~gd~ 195 (442)
-+++|++|+.+.+.+++. +.+.+....-.. +...+.++.++++++. + +++++ ++|+.++++++..++.+||.
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~ 93 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKK 93 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 368999999998866531 111111111122 7888999999999995 2 35444 56789999999888888765
Q ss_pred EE-eCCCchHH-HHHHHHhcCCeEEEe--c--C--CCHHHHHH-HHHhhcccccc---cccccccc-c-----------C
Q 013461 196 IV-ADEGVHWG-IQNGLYLSRSTVVYF--K--H--NDMDSLRN-TLERVTADNKR---SNSFGVLG-R-----------S 251 (442)
Q Consensus 196 Vi-~~~~~h~s-~~~~~~l~g~~v~~~--~--~--~d~~~Le~-~l~~~~~~~~~---a~~~g~~G-~-----------~ 251 (442)
+. +..+.+.. ..+.++..|.. ..+ + . .+..++++ .+++..+.... ..+.|++- + +
T Consensus 94 ~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i~g~l~vVD 172 (360)
T PRK05355 94 ADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDTGDVPLVAD 172 (360)
T ss_pred EEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCcccccCCCcEEEE
Confidence 32 33333332 23444555544 322 2 1 12334444 44331111000 23333331 0 0
Q ss_pred CCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhh-C----------CceeccCCCcHHHHHHHHHHH
Q 013461 252 GRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLS-S----------SGYVFSASLPPYLASAAITAI 319 (442)
Q Consensus 252 g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~-~----------~~~~~s~s~~p~~aaaa~aal 319 (442)
+.....+..++.++.|+++.|-.|++|.+| |+++.+++.++.+... . ..... .++|-....+..++|
T Consensus 173 avss~g~~~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~-~Tp~~~~i~aL~~aL 251 (360)
T PRK05355 173 MSSDILSRPIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMY-NTPPTFAIYLAGLVF 251 (360)
T ss_pred cCccccCccCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCcc-CCCcHHHHHHHHHHH
Confidence 111112233444567899999999999877 9999999988776541 1 01111 223334445556889
Q ss_pred HHHhcC---hHHHHHHHHHHHHHHHhhccCCCceeecC--CCC-CEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEE
Q 013461 320 DVLEEN---PDLITKLKKNTAILRTGLSDIHGLSIASN--PES-PIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 320 ~~l~~~---~~~~~~l~~~~~~l~~~L~~~~g~~~~~~--~~~-~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v 393 (442)
+++.+. +.+.++.+++.+++++.|++++.+....+ ..+ .++.+.++.. ....++... +.++|+.+
T Consensus 252 ~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~--------~~~~~~~~~-~~~~Gi~~ 322 (360)
T PRK05355 252 KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE--------ELDKKFLAE-AKAAGLVG 322 (360)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh--------HHHHHHHHH-HHHCCCcc
Confidence 888643 46788899999999999998842222111 234 4566665321 112345444 44569987
Q ss_pred eeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 394 VTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 394 ~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
.++.. .+..+|+|+...+|++||++++++|++++.
T Consensus 323 ~~~~~-------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 323 LKGHR-------SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred cCCCC-------ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 44432 124599999999999999999999998754
No 314
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.47 E-value=1.5e-11 Score=123.49 Aligned_cols=169 Identities=17% Similarity=0.233 Sum_probs=113.3
Q ss_pred ChHHHHHHHHHHHhcCCCCCc-cCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCch
Q 013461 125 HEKLLESCTSALEKYGVGSCG-PRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVH 203 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~~~-~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h 203 (442)
++++++++.+.++.|+..... ..+. ....+..+|+.+|+++|.+.++++++|+.|+..++.+ +.+||+|++.+..|
T Consensus 94 ~~~vieAv~~~~~~y~~l~~~l~~g~--~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~ 170 (454)
T TIGR00474 94 AEEAIEAVTDAARGYSNLEYDLETGK--RGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGEL 170 (454)
T ss_pred CHHHHHHHHHHHhcccchhccccccc--cchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChh
Confidence 689999999999987632100 0001 1245789999999999999999999999999888854 68999999988765
Q ss_pred H------HHHHHHHhcCCeEEEecCC---CHHHHHHHHHhhcccccc-------------------------cccccccc
Q 013461 204 W------GIQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKR-------------------------SNSFGVLG 249 (442)
Q Consensus 204 ~------s~~~~~~l~g~~v~~~~~~---d~~~Le~~l~~~~~~~~~-------------------------a~~~g~~G 249 (442)
. .+...++..|++++.++++ +++++++.+.+.+..... .|+.-++-
T Consensus 171 v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~viv 250 (454)
T TIGR00474 171 VEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVME 250 (454)
T ss_pred hhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 3 2345667789999999874 567777766543321000 11111112
Q ss_pred cCCCcccc---ccC---------CCCCceeEEEEeccccccC-CCcEEEcCHHhHHHHHh
Q 013461 250 RSGRGLTE---HCG---------VPVDKIDIVTAAMGHALAT-EGGFCTGSARVVDHQRL 296 (442)
Q Consensus 250 ~~g~g~~~---~~~---------v~~~~~diii~S~sK~lg~-~GG~v~g~~~~i~~l~~ 296 (442)
+.+.|... .++ ....++|+++.|.+|.+|. .||+++++++.++.++.
T Consensus 251 D~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 251 DLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKK 310 (454)
T ss_pred ECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhh
Confidence 22222210 011 1124579999999999964 57999999998877653
No 315
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.46 E-value=6.4e-11 Score=117.01 Aligned_cols=276 Identities=15% Similarity=0.120 Sum_probs=165.1
Q ss_pred HHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH-HHhcCCeEEEe--------------
Q 013461 156 HLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG-LYLSRSTVVYF-------------- 220 (442)
Q Consensus 156 ~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~-~~l~g~~v~~~-------------- 220 (442)
..+||+.+++++|.+.++.++||+.|+..+....++|||+| +..+|+....+ +...|+..+-+
T Consensus 80 ~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~ 157 (460)
T PRK13237 80 FYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPF 157 (460)
T ss_pred HHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCC
Confidence 46999999999999999999999999888777778999975 66667776666 77777755433
Q ss_pred cC-CCHHHHHHHHHhhccccc----c-------------------------ccccccccc--CCCcc--------ccccC
Q 013461 221 KH-NDMDSLRNTLERVTADNK----R-------------------------SNSFGVLGR--SGRGL--------TEHCG 260 (442)
Q Consensus 221 ~~-~d~~~Le~~l~~~~~~~~----~-------------------------a~~~g~~G~--~g~g~--------~~~~~ 260 (442)
+. -|++.|++.+++...... . .|++-++-+ ...|. ..+.+
T Consensus 158 tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~ 237 (460)
T PRK13237 158 KGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQD 237 (460)
T ss_pred CCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCC
Confidence 11 278899998875432110 0 122211111 00010 01222
Q ss_pred CCC--------CceeEEEEeccccccCC-CcEE-EcCHHhHHHHHhhCC---ceeccCCCcH-HHHHHHHHHHHHHhcCh
Q 013461 261 VPV--------DKIDIVTAAMGHALATE-GGFC-TGSARVVDHQRLSSS---GYVFSASLPP-YLASAAITAIDVLEENP 326 (442)
Q Consensus 261 v~~--------~~~diii~S~sK~lg~~-GG~v-~g~~~~i~~l~~~~~---~~~~s~s~~p-~~aaaa~aal~~l~~~~ 326 (442)
.+. .-.|+++.|++|.++.. ||++ +.++++.+.++.... ++.-...++. -..+.|....+.++.
T Consensus 238 ~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~-- 315 (460)
T PRK13237 238 KSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQY-- 315 (460)
T ss_pred CcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchH--
Confidence 221 23589999999999754 7775 456778888876532 2211122222 112222222232222
Q ss_pred HHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeecc------Ccc
Q 013461 327 DLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSK------RSM 400 (442)
Q Consensus 327 ~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~------~~~ 400 (442)
+..+.-.++.++|.+.|.+. |+++..+.+++-+++....-....+.+..-++.++..+..+.||-..-.. .|.
T Consensus 316 ~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~ 394 (460)
T PRK13237 316 EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPK 394 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCC
Confidence 45566666889999999886 99998777777777764321111111223345666666667777543211 111
Q ss_pred cccCCCC--CceEEEecC-CCCHHHHHHHHHHHHHHHHH
Q 013461 401 LDKCRLP--VGIRLFVSA-AHSEADLVKACESLKRISAV 436 (442)
Q Consensus 401 ~~~~~~~--~~iRi~~~~-~~t~eei~~~i~~l~~~~~~ 436 (442)
......| .-+|++++. .-|.+++|.+++++..+.++
T Consensus 395 ~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 395 TGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred CCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 1111111 349999885 46899999999999887654
No 316
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.46 E-value=2.2e-11 Score=120.73 Aligned_cols=190 Identities=15% Similarity=0.127 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~~~d~~~Le 229 (442)
+...+|+++||++.|.+.++++++|++++..++.+++++||.|+++.+.|++....+ ...+.++..++..|+++++
T Consensus 52 pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~ 131 (386)
T PRK08045 52 PTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALR 131 (386)
T ss_pred ccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHH
Confidence 456899999999999889999999999999999999999999999999888644322 2233466666666788888
Q ss_pred HHHHhhcccc-------cc------------ccccc--cc-ccCCCccccccCCCCCceeEEEEeccccccC-C---CcE
Q 013461 230 NTLERVTADN-------KR------------SNSFG--VL-GRSGRGLTEHCGVPVDKIDIVTAAMGHALAT-E---GGF 283 (442)
Q Consensus 230 ~~l~~~~~~~-------~~------------a~~~g--~~-G~~g~g~~~~~~v~~~~~diii~S~sK~lg~-~---GG~ 283 (442)
+.+++.++-. +. ++..| ++ ..+.........+ ...+|+++.|++|.++. . ||+
T Consensus 132 ~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl-~~gaDivv~S~tK~l~G~~d~~~G~ 210 (386)
T PRK08045 132 AALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL-ALGADLVLHSCTKYLNGHSDVVAGV 210 (386)
T ss_pred HhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hhCCCEEEeecceeccCCCCceeEE
Confidence 7775432210 00 22222 21 1111000000111 12468999999999963 2 466
Q ss_pred EEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 284 CTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 284 v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+++ ++++++.++.... ..+..++|+.+..++.+|+.+ +.++++..++...+.+.|++.|.+
T Consensus 211 vi~~~~~~~~~l~~~~~--~~g~~~~p~~~~l~~rgl~tl---~~R~~~~~~na~~la~~L~~~p~v 272 (386)
T PRK08045 211 VIAKDPDVVTELAWWAN--NIGVTGGAFDSYLLLRGLRTL---VPRMELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_pred EEeCcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhccH---HHHHHHHHHHHHHHHHHHHcCCCE
Confidence 654 6777777654322 234557888877776776654 346777888888888888776544
No 317
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.45 E-value=2.5e-11 Score=119.89 Aligned_cols=193 Identities=12% Similarity=0.046 Sum_probs=130.9
Q ss_pred CcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHH
Q 013461 152 TIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDS 227 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~ 227 (442)
..+....||+.++.+.+.+.++++++|++|+..++.+++++||.|++.++.|+++.. .++..|.++.+++..+.+.
T Consensus 62 gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~ 141 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAG 141 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHH
Confidence 457788999999999998899999999999999999999999999999999988664 3466788888887666677
Q ss_pred HHHHHHhhcccccc-------------------ccccc--ccccCCCccccccCCCCCceeEEEEeccccccCC----Cc
Q 013461 228 LRNTLERVTADNKR-------------------SNSFG--VLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE----GG 282 (442)
Q Consensus 228 Le~~l~~~~~~~~~-------------------a~~~g--~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~----GG 282 (442)
+++.+++.++.... ++..| ++-+.-....-.+..-..++||++.|++|.++.. +|
T Consensus 142 l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G 221 (395)
T PRK05967 142 IAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLG 221 (395)
T ss_pred HHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEE
Confidence 88777654321100 22222 2211111111111111235799999999999642 47
Q ss_pred EEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+++++++..+.++... ...+..++|..|...+..++.+ .-++++..++...+.+.|++.|.+
T Consensus 222 ~v~~~~~~~~~l~~~~--~~~G~~~~p~da~l~~rgl~Tl---~lR~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 222 TVSANEKCWPQLLEAH--GTLGLCAGPDDTYQILRGLRTM---GIRLEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred EEEcCHHHHHHHHHHH--HHcCCCCCHHHHHHHHcCcccH---HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 8888887666554321 1245667888877666665544 345666777777777777765543
No 318
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=9.5e-12 Score=124.90 Aligned_cols=191 Identities=18% Similarity=0.173 Sum_probs=127.2
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~L 228 (442)
.+....||+++|++.|.+.++++++|++|+..++.+++++||.|++..+.|+.... .++..|.++++++..|++++
T Consensus 63 ~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l 142 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENF 142 (431)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHH
Confidence 35578899999999999999999999999999999999999999999988876443 34567899999998889999
Q ss_pred HHHHHhhcccccc-------------------ccccc--ccccCCCccccccCCC--CCceeEEEEeccccccCC----C
Q 013461 229 RNTLERVTADNKR-------------------SNSFG--VLGRSGRGLTEHCGVP--VDKIDIVTAAMGHALATE----G 281 (442)
Q Consensus 229 e~~l~~~~~~~~~-------------------a~~~g--~~G~~g~g~~~~~~v~--~~~~diii~S~sK~lg~~----G 281 (442)
++.+++.++.... ++..| ++-+...+. . +... ..++|+++.|++|.+|.. |
T Consensus 143 ~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~-~-~~~~pl~~gaDivv~S~tK~lgg~g~~~G 220 (431)
T PRK08248 143 EAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFAS-P-YLLRPIEHGADIVVHSATKFIGGHGTSIG 220 (431)
T ss_pred HHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCc-c-ccCChhHcCCCEEEEcCccccCCCCCceE
Confidence 8887653221100 22222 221111110 0 1111 135799999999999854 4
Q ss_pred cEEEcCHHhH-----------------------H---------HHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHH
Q 013461 282 GFCTGSARVV-----------------------D---------HQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLI 329 (442)
Q Consensus 282 G~v~g~~~~i-----------------------~---------~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~ 329 (442)
|+++.+.+.. + ..+.. .....+..++|..|...+..|+.+ +.++
T Consensus 221 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~l~p~~a~l~~rgl~tl---~~R~ 296 (431)
T PRK08248 221 GVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQ-LLRDLGAALSPFNSFLLLQGLETL---HLRM 296 (431)
T ss_pred EEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHH-HHHhcCCCCCHHHHHHHhcCcCcH---HHHH
Confidence 6666433210 1 00000 112335677888887765655544 4467
Q ss_pred HHHHHHHHHHHHhhccCCCc
Q 013461 330 TKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 330 ~~l~~~~~~l~~~L~~~~g~ 349 (442)
++-+++...+.+.|++.|++
T Consensus 297 ~~~~~nA~~la~~L~~~p~v 316 (431)
T PRK08248 297 ERHSENALAVAKFLEEHEAV 316 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 77788888898988877654
No 319
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=8e-11 Score=113.89 Aligned_cols=291 Identities=22% Similarity=0.241 Sum_probs=192.2
Q ss_pred ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cE-EEEcchHHHHHhhhhhhccCCCEE-EeCC
Q 013461 125 HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DS-ILYSYGLSTMFSAIPCFCKKGDLI-VADE 200 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~-i~~~sG~~a~~~ai~a~~~~gd~V-i~~~ 200 (442)
+|+|++|+.+..- +.. +..| .+...++.+.+...++++ .+ ++.++|+.++++++..+++|||.| ++..
T Consensus 17 ~~~V~~am~~~~~----~h~-s~~F---~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~n 88 (383)
T COG0075 17 PPRVLLAMARPMV----GHR-SPDF---VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVN 88 (383)
T ss_pred CHHHHHHhcCCCC----CCC-CHHH---HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeC
Confidence 5788777654321 111 1112 366788889999999976 44 555789999999999999999976 4566
Q ss_pred CchHHHH-HHHHhcCCeEEEecC-----CCHHHHHHHHHhhcccccc-----ccccccc------------------cc-
Q 013461 201 GVHWGIQ-NGLYLSRSTVVYFKH-----NDMDSLRNTLERVTADNKR-----SNSFGVL------------------GR- 250 (442)
Q Consensus 201 ~~h~s~~-~~~~l~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~~-----a~~~g~~------------------G~- 250 (442)
+.++.-+ +-++..|++++.+.. -|++++++.|++..+-... ..+.|++ -+
T Consensus 89 G~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDa 168 (383)
T COG0075 89 GKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDA 168 (383)
T ss_pred ChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEe
Confidence 6666543 456777888776653 3799999999854322111 2222222 11
Q ss_pred -CCCccccccCCCCCceeEEEEeccccccC-CC-cEEEcCHHhHHHHHhhCCc-ee---------------ccCCCcHHH
Q 013461 251 -SGRGLTEHCGVPVDKIDIVTAAMGHALAT-EG-GFCTGSARVVDHQRLSSSG-YV---------------FSASLPPYL 311 (442)
Q Consensus 251 -~g~g~~~~~~v~~~~~diii~S~sK~lg~-~G-G~v~g~~~~i~~l~~~~~~-~~---------------~s~s~~p~~ 311 (442)
+..|. +.+.++...+|+++.+--|+++. +| |++..+++..+.+.....+ |. +-.++|...
T Consensus 169 VsS~Gg-~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~ 247 (383)
T COG0075 169 VSSLGG-EPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNL 247 (383)
T ss_pred cccCCC-cccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHH
Confidence 11121 12344445789999999999974 56 8899999888877654332 21 112234444
Q ss_pred HHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCCceeecC--CCCCEEEEEecCCCCCchhhHHHHHHHHHHHHH
Q 013461 312 ASAAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHGLSIASN--PESPIVFLILEKSTGSMKNDLQLLEDIADWALK 387 (442)
Q Consensus 312 aaaa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~ 387 (442)
..+..++|+.+.++ +.+.++.+++.+.+++++..+ |+++... ..+|.+..... +.+. + ..++...+++
T Consensus 248 i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~-P~g~---~---~~~~~~~~~~ 319 (383)
T COG0075 248 IYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKV-PEGV---D---DKKVRRALLK 319 (383)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEEC-CCCC---C---cHHHHHHHHH
Confidence 55566889888754 678899999999999999998 9887762 23555444332 2221 1 1123335677
Q ss_pred hCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 388 EDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 388 ~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+.|+.+.++..+..+ ..+||...-..+.+++..++.+|..++.++
T Consensus 320 ~~g~~i~gg~~~l~g-----kifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 320 EYGVEIAGGQGPLKG-----KIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred hCCEEecccccccCc-----cEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 779999887664321 239999888999999999999999998765
No 320
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.44 E-value=1.7e-11 Score=127.34 Aligned_cols=271 Identities=14% Similarity=0.168 Sum_probs=167.0
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchH-HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC--C------
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--N------ 223 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~-~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~--~------ 223 (442)
.....+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++|+.+|-|+..++.++|+++++++. |
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g 273 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG 273 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 456689999999999999998888885 7899999999999999999999999999999999999998742 1
Q ss_pred --C-----HHHHHHHHHhhccccc---c--------------------cccccccccCCCcccccc------------CC
Q 013461 224 --D-----MDSLRNTLERVTADNK---R--------------------SNSFGVLGRSGRGLTEHC------------GV 261 (442)
Q Consensus 224 --d-----~~~Le~~l~~~~~~~~---~--------------------a~~~g~~G~~g~g~~~~~------------~v 261 (442)
+ .+.+++.+++.....+ . .|.-+++-+..+|....| +-
T Consensus 274 ~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~ilvDEAwgah~~F~p~~~~~sam~~ga 353 (714)
T PRK15400 274 GIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGR 353 (714)
T ss_pred CCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCCEEEEccchhhhccCcccCCcChhhcCC
Confidence 2 6888888887653221 1 233333322222221111 11
Q ss_pred CCCceeEEEEeccccccCC--CcEEEcCHHhHHHHHhhCCceeccCCCcH-HHHHHHHHHHHHHh--cChHHHHHHHHHH
Q 013461 262 PVDKIDIVTAAMGHALATE--GGFCTGSARVVDHQRLSSSGYVFSASLPP-YLASAAITAIDVLE--ENPDLITKLKKNT 336 (442)
Q Consensus 262 ~~~~~diii~S~sK~lg~~--GG~v~g~~~~i~~l~~~~~~~~~s~s~~p-~~aaaa~aal~~l~--~~~~~~~~l~~~~ 336 (442)
++++..+++.|.+|.+++. +.++..+.. +++-+....-.++.++.|. ..+|..-.+..+++ ....+.++..+..
T Consensus 354 ~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a 432 (714)
T PRK15400 354 VEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERA 432 (714)
T ss_pred CCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 1122339999999999732 233322221 2211111111233333443 44444446666776 3466788888888
Q ss_pred HHHHHhhccCCC------ceeecCCC----------------------------CCEEEEE-ecC--CCCCchhhHHHHH
Q 013461 337 AILRTGLSDIHG------LSIASNPE----------------------------SPIVFLI-LEK--STGSMKNDLQLLE 379 (442)
Q Consensus 337 ~~l~~~L~~~~g------~~~~~~~~----------------------------~~i~~~~-~~~--~~~~~~~~~~~~~ 379 (442)
..+++.|.++++ +.+..+.. -|+-... .+. ..|..... ....
T Consensus 433 ~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~-Gipg 511 (714)
T PRK15400 433 IKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDF-GIPA 511 (714)
T ss_pred HHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCcccccc-CCCH
Confidence 899998887755 54442110 1111111 100 00000000 0112
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
.++.+.|+++||.+-.... ..+-+.++...|+++++.++++|.++-
T Consensus 512 ~~v~~~L~e~gI~~E~~d~---------~~iLfl~s~g~t~~~~~~L~~aL~~f~ 557 (714)
T PRK15400 512 SIVAKYLDEHGIVVEKTGP---------YNLLFLFSIGIDKTKALSLLRALTDFK 557 (714)
T ss_pred HHHHHHHHHcCCEEEecCC---------CeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 2344467888998765433 348888899999999999999998763
No 321
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.44 E-value=9.2e-12 Score=122.50 Aligned_cols=202 Identities=14% Similarity=0.102 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhc----CCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLS----RSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~----g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++.|.+.++++++|++|+..++ .++++||.|++....|+....-+... +..+.+ ..|+++++
T Consensus 54 p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~--~~d~~~l~ 130 (364)
T PRK07269 54 PTRAKLEETLAAIESADYALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY--ANTEEELI 130 (364)
T ss_pred ccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe--cCCHHHHH
Confidence 446799999999999999999999999999888 46799999999888777654433221 111122 24677777
Q ss_pred HHHHhhcccccc---------------------ccccccc-ccC-CCccccccCCCCCceeEEEEeccccccC----CCc
Q 013461 230 NTLERVTADNKR---------------------SNSFGVL-GRS-GRGLTEHCGVPVDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~-G~~-g~g~~~~~~v~~~~~diii~S~sK~lg~----~GG 282 (442)
+.+++.++-... .|+.-++ ..+ +.+.. ...+ ....|+++.|++|.++. .||
T Consensus 131 ~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-~~pl-~~gaDivv~S~tK~l~g~~d~~gG 208 (364)
T PRK07269 131 AAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-QRPI-ELGADIVLHSATKYLSGHNDVLAG 208 (364)
T ss_pred HhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-CCch-hhCCcEEEecCceeccCCCcccce
Confidence 777543321100 2222222 111 11111 0111 23579999999999974 368
Q ss_pred EEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-eecCCCCCEE
Q 013461 283 FCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IASNPESPIV 360 (442)
Q Consensus 283 ~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~~~i~ 360 (442)
++++ ++++.+.++... . ..+..++|+.++.++..|+.+ +.++++-+++..++.+.|++.|.+. +.-++.+.++
T Consensus 209 ~v~~~~~~l~~~~~~~~-~-~~G~~~s~~~a~l~~~~L~tL---~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~ 283 (364)
T PRK07269 209 VVVTNDLELYEKLFYNL-N-TTGAVLSPFDSYLLMRGLKTL---SLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMI 283 (364)
T ss_pred EEEeCcHHHHHHHHHHH-H-HhCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEE
Confidence 8776 567777665321 1 234567899888877776655 4467777888999999998876653 4435567888
Q ss_pred EEEec
Q 013461 361 FLILE 365 (442)
Q Consensus 361 ~~~~~ 365 (442)
.+.+.
T Consensus 284 sf~~~ 288 (364)
T PRK07269 284 SFKVA 288 (364)
T ss_pred EEEEC
Confidence 88874
No 322
>PRK15029 arginine decarboxylase; Provisional
Probab=99.43 E-value=2e-11 Score=128.20 Aligned_cols=196 Identities=12% Similarity=0.154 Sum_probs=128.1
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchH-HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC--------
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------- 223 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~-~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------- 223 (442)
.....+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++++.+|-|+..|+.++|++++++...
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~ 283 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIG 283 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 345688999999999999998888886 78999999999999999999999999999999999999887421
Q ss_pred --C-----HHHHHHHHHhhcccc--------cc--------------------ccccc--ccccCCCccc----c----c
Q 013461 224 --D-----MDSLRNTLERVTADN--------KR--------------------SNSFG--VLGRSGRGLT----E----H 258 (442)
Q Consensus 224 --d-----~~~Le~~l~~~~~~~--------~~--------------------a~~~g--~~G~~g~g~~----~----~ 258 (442)
+ ++.+++.+++..... .. +|..| ++-+..+|.. . +
T Consensus 284 ~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~ 363 (755)
T PRK15029 284 PIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH 363 (755)
T ss_pred CCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccccccCcccccc
Confidence 2 788998887654321 01 22222 1211122221 1 1
Q ss_pred cCC-----CCCcee-EEEEeccccccC--CCcEEEcCHH--hHHHHHhhCCceec-cCCCcHHHHHHHHHHHHHHhc--C
Q 013461 259 CGV-----PVDKID-IVTAAMGHALAT--EGGFCTGSAR--VVDHQRLSSSGYVF-SASLPPYLASAAITAIDVLEE--N 325 (442)
Q Consensus 259 ~~v-----~~~~~d-iii~S~sK~lg~--~GG~v~g~~~--~i~~l~~~~~~~~~-s~s~~p~~aaaa~aal~~l~~--~ 325 (442)
..+ ...+.| +++.|.+|.+++ .+.++..+.. .++.-+....-.++ |+|++-+.+|..-.|..+++. .
T Consensus 364 sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G 443 (755)
T PRK15029 364 YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSG 443 (755)
T ss_pred ccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhh
Confidence 112 113456 999999999974 3455544222 23321111111233 444444445555567777763 5
Q ss_pred hHHHHHHHHHHHHHHHhhccCCC
Q 013461 326 PDLITKLKKNTAILRTGLSDIHG 348 (442)
Q Consensus 326 ~~~~~~l~~~~~~l~~~L~~~~g 348 (442)
.++.++..+....+++.+.++++
T Consensus 444 ~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 444 LSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 66778888888888888876643
No 323
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.43 E-value=3.5e-11 Score=119.76 Aligned_cols=262 Identities=12% Similarity=0.094 Sum_probs=158.8
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~L 228 (442)
.+...++|+++|++.|.+.++++++|+.|+..++. +.++||.|++.++.|++.. ..++..|++++.++..|++++
T Consensus 53 ~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 131 (390)
T PRK08064 53 NPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEV 131 (390)
T ss_pred ChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 35678999999999999999999999999988886 7799999999998887543 344557899999988788888
Q ss_pred HHHHHhhcccccc-------------------cccccc--cccCCCccc-cccCCCCCceeEEEEeccccccC----CCc
Q 013461 229 RNTLERVTADNKR-------------------SNSFGV--LGRSGRGLT-EHCGVPVDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 229 e~~l~~~~~~~~~-------------------a~~~g~--~G~~g~g~~-~~~~v~~~~~diii~S~sK~lg~----~GG 282 (442)
++.+++.++-... ++..|+ +-+...+.. ....+ ..++|+++.|++|.++. .+|
T Consensus 132 ~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~g~Divv~S~tK~~~G~~~~laG 210 (390)
T PRK08064 132 AQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DLGADVVLHSATKFLAGHSDVLAG 210 (390)
T ss_pred HHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hhCCcEEEeecceeccCCccceeE
Confidence 8777543321100 222221 111111100 00011 12569999999999963 247
Q ss_pred EEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc------------
Q 013461 283 FCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL------------ 349 (442)
Q Consensus 283 ~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~------------ 349 (442)
++++ ++++++.++....+ ++...+|..+..+...++ ..+.++++..++...+.+.|++.+.+
T Consensus 211 ~~v~~~~~~~~~l~~~~~~--~g~~~~~~~a~l~~~gl~---tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p 285 (390)
T PRK08064 211 LAVVKDEELAQKLYFLQNS--FGAVLGVQDCWLVLRGLK---TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHL 285 (390)
T ss_pred EEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHcccC---cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCc
Confidence 6655 56788777654322 344556666654433333 33456666777777777777654322
Q ss_pred --eeec---CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCE---EEeeccCcc-------ccc----------C
Q 013461 350 --SIAS---NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGV---FVVTSKRSM-------LDK----------C 404 (442)
Q Consensus 350 --~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV---~v~~~~~~~-------~~~----------~ 404 (442)
.+.. ...++++.+.++. ...+.++ ++..++ .++-+...+ ..+ .
T Consensus 286 ~~~~~~~~~~g~gg~~sf~~~~--------~~~~~~f----~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~ 353 (390)
T PRK08064 286 GFDIQQSQATSAGAVLSFTLQS--------EEAVRQF----VSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDER 353 (390)
T ss_pred cHHHHHHhCCCcceEEEEEECC--------HHHHHHH----HHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhc
Confidence 1111 1245688888732 1122333 444445 222221100 000 1
Q ss_pred CC-CCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 405 RL-PVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 405 ~~-~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.. +..||+|+....+++.|+.+.++|+++
T Consensus 354 gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 354 GITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 11 245999999988888888888888764
No 324
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.43 E-value=2.2e-11 Score=120.53 Aligned_cols=190 Identities=12% Similarity=0.112 Sum_probs=125.2
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~L 228 (442)
.+...+||+++|++.|.+.++++++|+.++..++ .++++||.|++..+.|++... .+...|++++.++..|++++
T Consensus 49 ~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 127 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEV 127 (377)
T ss_pred ChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHH
Confidence 4557899999999999999999999998887665 578999999999998875543 23446889999988888888
Q ss_pred HHHHHhhcccc-------cc--------------cccccccccCCCccccccCCC-CCceeEEEEeccccccC----CCc
Q 013461 229 RNTLERVTADN-------KR--------------SNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALAT----EGG 282 (442)
Q Consensus 229 e~~l~~~~~~~-------~~--------------a~~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~----~GG 282 (442)
++.+++.++-. +. .++.-++-+.-.+. ..++.+ ....|+++.|++|.+|. .||
T Consensus 128 ~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~-~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G 206 (377)
T PRK07671 128 EEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMT-PYWQSPISLGADIVLHSATKYLGGHSDVVAG 206 (377)
T ss_pred HHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCc-cccCChhhhCCeEEEecCcccccCCccceeE
Confidence 88876433211 00 22222211111111 011111 12568999999999974 257
Q ss_pred EEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 283 FCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 283 ~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
++++ ++++++.++.... .....++|..+..++..++.+ ..++++.+++...+.+.|++.+++
T Consensus 207 ~~v~~~~~l~~~~~~~~~--~~g~~~~~~~a~l~~~~l~tl---~~R~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 207 LVVVNSPELAEDLHFVQN--STGGILGPQDSWLLLRGLKTL---GIRMEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred EEEeCcHHHHHHHHHHHH--hhcCCCCHHHHHHHHcCcChH---HHHHHHHHHHHHHHHHHHHcCCCe
Confidence 6554 6677776654321 224556787777665555544 336777778888888888776543
No 325
>PRK04311 selenocysteine synthase; Provisional
Probab=99.42 E-value=6e-11 Score=119.51 Aligned_cols=286 Identities=15% Similarity=0.148 Sum_probs=164.5
Q ss_pred ChHHHHHHHHHHHhcCCCCC-ccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCch
Q 013461 125 HEKLLESCTSALEKYGVGSC-GPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVH 203 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~~-~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h 203 (442)
++++.+++.+++..|.+... ...+. ..+.+..+|+.+|+++|.+.++++++|+.|+..++.+ ..+||.|++.+..|
T Consensus 99 ~~~v~eav~~~~~~~~~le~~l~~g~--~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~ 175 (464)
T PRK04311 99 SEAAIEAVTEAARGYSNLEYDLATGK--RGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGEL 175 (464)
T ss_pred CHHHHHHHHHHHhcccccccchhhcc--cchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhh
Confidence 58999999999887652110 00011 1245679999999999999999999999999888865 58999999987655
Q ss_pred HH------HHHHHHhcCCeEEEecCC---CHHHHHHHHHhhcccccc-------------------------cccccccc
Q 013461 204 WG------IQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKR-------------------------SNSFGVLG 249 (442)
Q Consensus 204 ~s------~~~~~~l~g~~v~~~~~~---d~~~Le~~l~~~~~~~~~-------------------------a~~~g~~G 249 (442)
.+ +...+...|+++++++++ +++++++.+.+.+..... .|+.-++-
T Consensus 176 ~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~viv 255 (464)
T PRK04311 176 VEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVY 255 (464)
T ss_pred hhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEE
Confidence 42 334567789999998864 466777777543321100 12211222
Q ss_pred cCCCcccc---cc------CCC---CCceeEEEEecccccc-CCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHH
Q 013461 250 RSGRGLTE---HC------GVP---VDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAI 316 (442)
Q Consensus 250 ~~g~g~~~---~~------~v~---~~~~diii~S~sK~lg-~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~ 316 (442)
+.|.|... .+ .+. ..++|+++.|.+|.+| ..+|++++++++++.++.....-.+. ..-...++..
T Consensus 256 D~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~~r~lr--~dk~~l~~l~ 333 (464)
T PRK04311 256 DLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPLKRALR--VDKLTLAALE 333 (464)
T ss_pred ECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchhHHHHh--cchHHHHHHH
Confidence 22222210 11 111 1468999999999996 45799999999998776322111110 0112222222
Q ss_pred HHHHHHh-c------------ChHHHHHHHHHHHHHHHhhccCC--Cc--eeecC---------C--CCCEEEEEecCCC
Q 013461 317 TAIDVLE-E------------NPDLITKLKKNTAILRTGLSDIH--GL--SIASN---------P--ESPIVFLILEKST 368 (442)
Q Consensus 317 aal~~l~-~------------~~~~~~~l~~~~~~l~~~L~~~~--g~--~~~~~---------~--~~~i~~~~~~~~~ 368 (442)
+++.... . .....++++++.+.+.+.|.+.+ ++ .+... | .-|-+.+.+....
T Consensus 334 ~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~ 413 (464)
T PRK04311 334 ATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKD 413 (464)
T ss_pred HHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCC
Confidence 2332111 0 01123566667777777776542 22 22211 1 1244555553221
Q ss_pred CCchhhHHHHHHHHHHHHHhC--CEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 369 GSMKNDLQLLEDIADWALKED--GVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 369 ~~~~~~~~~~~~i~~~~L~~~--GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
....++.+ .|++. .|+.+.. ...+.+-+-. ..++|++.++++|++++
T Consensus 414 -------~~~~~l~~-~lr~~~~~i~~r~~----------~~~~~ld~r~-~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 414 -------RSLEALAA-RLRLLPPPVIGRIE----------DGRLLLDLRT-LEEEDEERLAAALLEAL 462 (464)
T ss_pred -------CCHHHHHH-HHhcCCCCEEEEEE----------CCEEEEEeCc-CCHHHHHHHHHHHHHHh
Confidence 11234555 46653 3444321 1225565544 68899999999998875
No 326
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.42 E-value=2.7e-11 Score=121.58 Aligned_cols=192 Identities=22% Similarity=0.182 Sum_probs=126.0
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~~~d~~~L 228 (442)
.+...++|+++|++.|.+.+++++||++|+..++.++.++||+|++....|.++...+ ...|.++++++.+|++++
T Consensus 63 ~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l 142 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGW 142 (433)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence 3668999999999999999999999999999999988999999999999888765544 336889999988889999
Q ss_pred HHHHHhhcccccc-------------------ccccc--ccccCCCccccccCCC-CCceeEEEEeccccccCCC----c
Q 013461 229 RNTLERVTADNKR-------------------SNSFG--VLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALATEG----G 282 (442)
Q Consensus 229 e~~l~~~~~~~~~-------------------a~~~g--~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~~G----G 282 (442)
++.++..++.... +|..| ++-+.-. ...+...+ ..++|+++.|.+|.+|..| |
T Consensus 143 ~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~-a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG 221 (433)
T PRK08134 143 RAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTF-TTPYLLRPFEHGADLVYHSATKFLGGHGTAIGG 221 (433)
T ss_pred HHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCC-cccccCCchhcCCCEEEeccccccCCCCCceEE
Confidence 9888764432110 22222 2211111 11111111 1357999999999997543 5
Q ss_pred EEEcCHH--------------------------------hHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHH
Q 013461 283 FCTGSAR--------------------------------VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLIT 330 (442)
Q Consensus 283 ~v~g~~~--------------------------------~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~ 330 (442)
+++.... .....+... ...++..++|..|+..+..|+.+ +.+++
T Consensus 222 ~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~G~~ls~~~A~l~~~gL~tl---~~R~~ 297 (433)
T PRK08134 222 VLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREG-LRDFGACLSPMNAWQLLQGIETL---PLRME 297 (433)
T ss_pred EEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHH-HHhcCCCCCHHHHHHHhcCCCcH---HHHHH
Confidence 5543210 000011000 11234567888877765555544 45677
Q ss_pred HHHHHHHHHHHhhccCCCc
Q 013461 331 KLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 331 ~l~~~~~~l~~~L~~~~g~ 349 (442)
+-.++...+.+.|++.|.+
T Consensus 298 ~~~~nA~~la~~L~~~p~V 316 (433)
T PRK08134 298 RHVANTRKVVAFLASHPAV 316 (433)
T ss_pred HHHHHHHHHHHHHHhCCCc
Confidence 7788888888888776543
No 327
>PLN03032 serine decarboxylase; Provisional
Probab=99.42 E-value=8.4e-11 Score=115.32 Aligned_cols=278 Identities=12% Similarity=0.025 Sum_probs=181.5
Q ss_pred ChHHHHHHHHHHH-hcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cE--EEEcchHHHHHhhhhhhc--cCCCEEE
Q 013461 125 HEKLLESCTSALE-KYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DS--ILYSYGLSTMFSAIPCFC--KKGDLIV 197 (442)
Q Consensus 125 ~p~v~ea~~~~l~-~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~--i~~~sG~~a~~~ai~a~~--~~gd~Vi 197 (442)
++.+.+++.+.+. ++|+.+..+.....+.+...++.+.+|+++|.+ +. +++++||++|..++.+.. .++++|+
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi 115 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY 115 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence 3466777777775 467665554444456788899999999999964 33 888999999988886553 3457899
Q ss_pred eCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhcccccc------------------------cccc---
Q 013461 198 ADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLRNTLERVTADNKR------------------------SNSF--- 245 (442)
Q Consensus 198 ~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~------------------------a~~~--- 245 (442)
++...|.++.++++..+..+..++.+ |+++|++.+++.+..... .++.
T Consensus 116 ~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~ 195 (374)
T PLN03032 116 ASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTED 195 (374)
T ss_pred eCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999888776666532 789999998764211111 2221
Q ss_pred c--cc--ccCCCccccc------cCCCCCceeEEEEecccccc-CCC-cEEEcCHHhHHHHHhhCCcee------ccCCC
Q 013461 246 G--VL--GRSGRGLTEH------CGVPVDKIDIVTAAMGHALA-TEG-GFCTGSARVVDHQRLSSSGYV------FSASL 307 (442)
Q Consensus 246 g--~~--G~~g~g~~~~------~~v~~~~~diii~S~sK~lg-~~G-G~v~g~~~~i~~l~~~~~~~~------~s~s~ 307 (442)
+ +. +..|.+.... ++.. ..+|.++.|.+|.+| ..| |+++.++..++.+... ..|. ..+|-
T Consensus 196 ~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~-~~Yl~~~d~ti~gSR 273 (374)
T PLN03032 196 RFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQN-VEYLNSRDATIMGSR 273 (374)
T ss_pred CeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhccC-CcccCCCCCcccCCC
Confidence 0 11 1112222211 1221 247889999999998 445 7888877766654322 2332 22333
Q ss_pred cHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHH
Q 013461 308 PPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWA 385 (442)
Q Consensus 308 ~p~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~ 385 (442)
+...++....+++.+- ...++.++..++.+++.+.|++. ++++...+.+.++.+.-+. .+.
T Consensus 274 ~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~---------------~~~- 336 (374)
T PLN03032 274 NGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPM---------------DEA- 336 (374)
T ss_pred chHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCC---------------cHh-
Confidence 4444455556666553 23567888889999999999886 8887666777766654321 111
Q ss_pred HHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 386 LKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 386 L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
+.+ |..+.+. +..+++++...+|++.+|++++-|++
T Consensus 337 ~~~-~w~l~~~----------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 337 FIK-KWQLACE----------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred Hhh-eeeeccc----------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 222 5544432 12489999999999999999988865
No 328
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.42 E-value=3.4e-11 Score=118.80 Aligned_cols=254 Identities=13% Similarity=0.113 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHH----HhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGL----YLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~----~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++. .++++++++|++|+..++.+++++||.|++..+.|+.+...+ ...|.+++.++.++...
T Consensus 51 p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~-- 127 (366)
T PRK07582 51 PTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE-- 127 (366)
T ss_pred ccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--
Confidence 45689999999999 678999999999999999999999999999888777665433 34578888887654321
Q ss_pred HHHHhhcc-------cccc------------c--cccccc-ccCCCccccccCCCC--CceeEEEEeccccccC-C---C
Q 013461 230 NTLERVTA-------DNKR------------S--NSFGVL-GRSGRGLTEHCGVPV--DKIDIVTAAMGHALAT-E---G 281 (442)
Q Consensus 230 ~~l~~~~~-------~~~~------------a--~~~g~~-G~~g~g~~~~~~v~~--~~~diii~S~sK~lg~-~---G 281 (442)
.... .++ .++. + ++.-++ ..+-. ...+..| ...|+++.|++|.++. . +
T Consensus 128 ~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~---~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~ 203 (366)
T PRK07582 128 AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTA---TPLGQRPLELGADLVVASDTKALTGHSDLLL 203 (366)
T ss_pred Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCC---CccccCchhcCCcEEEecccccccCCCCeeE
Confidence 1111 110 0000 2 222111 11100 0011111 2458999999999953 2 4
Q ss_pred cEEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-ee-----cC
Q 013461 282 GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IA-----SN 354 (442)
Q Consensus 282 G~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~-----~~ 354 (442)
||+++ ++++++.++.... ..+..++|+.+..+...++.+ +.++++.+++...+.+.|++.|.+. +. ++
T Consensus 204 G~v~~~~~~l~~~l~~~~~--~~g~~~~~~~a~l~~r~l~tl---~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~ 278 (366)
T PRK07582 204 GYVAGRDPELMAAVERWRL--LAGAIPGPFEAWLAHRSLGTL---GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGD 278 (366)
T ss_pred EEEEcCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCC
Confidence 88886 5777777664321 123456788777666666544 3456778889999999998776543 11 11
Q ss_pred C-----------CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccC---cc-c----ccC-CC-CCceEEE
Q 013461 355 P-----------ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR---SM-L----DKC-RL-PVGIRLF 413 (442)
Q Consensus 355 ~-----------~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~---~~-~----~~~-~~-~~~iRi~ 413 (442)
+ .+.++.+.+++ .. + +.+++++.++.....+. .+ . ..+ .. +.-||+|
T Consensus 279 p~~~~~~~~~~~~gg~~s~~~~~--------~~---~-~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~s 346 (366)
T PRK07582 279 PAHEVAARQMRRFGGLVSFELAD--------AA---A-AERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLS 346 (366)
T ss_pred ccHHHHHhhCCCCcceEEEEeCC--------HH---H-HHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEE
Confidence 2 36688888841 11 1 22345444554431111 01 0 001 11 2349999
Q ss_pred ecCCCCHHHHHHHHHHHH
Q 013461 414 VSAAHSEADLVKACESLK 431 (442)
Q Consensus 414 ~~~~~t~eei~~~i~~l~ 431 (442)
++...+++.|+.+.++|+
T Consensus 347 vGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 347 CGIEDTDDLVADLERALD 364 (366)
T ss_pred eccCCHHHHHHHHHHHHh
Confidence 999777777776666664
No 329
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.42 E-value=2.8e-11 Score=121.65 Aligned_cols=193 Identities=15% Similarity=0.127 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++.|.+.++++++|++|+..++.+++++||.|+++...|.+.... +...|.++++++.+|+++++
T Consensus 63 p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 142 (427)
T PRK05994 63 PTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFE 142 (427)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHH
Confidence 45688999999999999999999999999999999999999999998888865433 45678999999888888888
Q ss_pred HHHHhhcccccc---------------------cccccccccCCCccccccCCCCCceeEEEEeccccccCC----CcEE
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE----GGFC 284 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~----GG~v 284 (442)
+.+++.++-... .|+.-++-+.-....-....-....|+++.|++|.+|.. ||++
T Consensus 143 ~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v 222 (427)
T PRK05994 143 RAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGII 222 (427)
T ss_pred HhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEE
Confidence 887643221100 222222211111100001111135799999999999753 4665
Q ss_pred EcCHH-----------------------hHHHHH-------h-hCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHH
Q 013461 285 TGSAR-----------------------VVDHQR-------L-SSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLK 333 (442)
Q Consensus 285 ~g~~~-----------------------~i~~l~-------~-~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~ 333 (442)
+.... +.+.+. . .......+..++|+.|+.++..|+.+ +.+.++-+
T Consensus 223 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL---~~r~~~~~ 299 (427)
T PRK05994 223 VDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETL---PLRMQRHS 299 (427)
T ss_pred EeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccH---HHHHHHHH
Confidence 53211 111100 0 00011234567899888877766655 44677778
Q ss_pred HHHHHHHHhhccCCCc
Q 013461 334 KNTAILRTGLSDIHGL 349 (442)
Q Consensus 334 ~~~~~l~~~L~~~~g~ 349 (442)
++..++.+.|++.|++
T Consensus 300 ~~a~~la~~L~~~p~v 315 (427)
T PRK05994 300 DNALAVAEWLKGHPKV 315 (427)
T ss_pred HHHHHHHHHHHhCCCc
Confidence 8888888888876654
No 330
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.42 E-value=2.3e-12 Score=123.48 Aligned_cols=192 Identities=19% Similarity=0.237 Sum_probs=124.8
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEc-chHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC---------
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYS-YGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--------- 222 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~-sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~--------- 222 (442)
...+.++++.+|+++|.+++++++ ++++++..++.+++++||.|++++++|.++..++.+.|+++++++.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~ 137 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIA 137 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcC
Confidence 455789999999999999888744 4568999999999999999999999999999999999998877642
Q ss_pred --CCHHHHHHHHHhhcccccc----------------------cccccccccCCCccc----cccC--CCCCceeEEEEe
Q 013461 223 --NDMDSLRNTLERVTADNKR----------------------SNSFGVLGRSGRGLT----EHCG--VPVDKIDIVTAA 272 (442)
Q Consensus 223 --~d~~~Le~~l~~~~~~~~~----------------------a~~~g~~G~~g~g~~----~~~~--v~~~~~diii~S 272 (442)
.|++++++.+++..+.... .++.-++-+...+.. ..+. ....++|+++.|
T Consensus 138 ~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S 217 (294)
T cd00615 138 GGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQS 217 (294)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEc
Confidence 3688898888653211000 222212211111110 0011 111357999999
Q ss_pred ccccccC-C-CcEEEcCHHhHHHHHhhCCceec-cCCCcHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHhhc
Q 013461 273 MGHALAT-E-GGFCTGSARVVDHQRLSSSGYVF-SASLPPYLASAAITAIDVLE-ENPDLITKLKKNTAILRTGLS 344 (442)
Q Consensus 273 ~sK~lg~-~-GG~v~g~~~~i~~l~~~~~~~~~-s~s~~p~~aaaa~aal~~l~-~~~~~~~~l~~~~~~l~~~L~ 344 (442)
++|++++ . ||++..+.+..+..+.......+ +++++...+++..++++.+. +..+.++++.++.+++++.|+
T Consensus 218 ~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 218 THKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred hhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 9999964 2 46665554432222111112223 33444455555567777665 356678889999999988775
No 331
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.41 E-value=5.3e-11 Score=119.50 Aligned_cols=82 Identities=20% Similarity=0.198 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++.|.+.++++++|++|+..++.+++++||.|+++.+.|+++. ..+...|.++++++.+|+++++
T Consensus 57 p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~ 136 (418)
T TIGR01326 57 PTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFE 136 (418)
T ss_pred hhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHH
Confidence 556899999999999999999999999999999999999999999888776543 3355678999999988899998
Q ss_pred HHHHhh
Q 013461 230 NTLERV 235 (442)
Q Consensus 230 ~~l~~~ 235 (442)
+.+++.
T Consensus 137 ~~l~~~ 142 (418)
T TIGR01326 137 KAIDEN 142 (418)
T ss_pred HhcCcC
Confidence 887643
No 332
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.40 E-value=4.8e-11 Score=119.77 Aligned_cols=191 Identities=17% Similarity=0.145 Sum_probs=126.5
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEec-CCCHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFK-HNDMDS 227 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~-~~d~~~ 227 (442)
.+...++|+++|++.|.+.+++++||++|+..++.++.++||+|++....|+++. ..+...|.++.+++ .+|+++
T Consensus 68 ~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~ 147 (437)
T PRK05613 68 NPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPES 147 (437)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHH
Confidence 4667899999999999999999999999999999888999999999998998874 33456788999886 457888
Q ss_pred HHHHHHhhcccccc-------------------cccccc--cccC--CCccccccCCCCCceeEEEEeccccccCC----
Q 013461 228 LRNTLERVTADNKR-------------------SNSFGV--LGRS--GRGLTEHCGVPVDKIDIVTAAMGHALATE---- 280 (442)
Q Consensus 228 Le~~l~~~~~~~~~-------------------a~~~g~--~G~~--g~g~~~~~~v~~~~~diii~S~sK~lg~~---- 280 (442)
+++.+++.++.... ++..|+ +-+. +.|.. +..+ ...+|+++.|++|.++..
T Consensus 148 l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~-~~GaDivv~S~~K~l~G~gd~~ 225 (437)
T PRK05613 148 WQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPL-ELGADVVVASLTKFYTGNGSGL 225 (437)
T ss_pred HHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChH-HhCCCEEEeeccceecCCCcce
Confidence 88877654321100 222222 1111 11111 1111 135799999999999743
Q ss_pred CcEEEcCHHh-----------------------------------HHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcC
Q 013461 281 GGFCTGSARV-----------------------------------VDHQRLSSSGYVFSASLPPYLASAAITAIDVLEEN 325 (442)
Q Consensus 281 GG~v~g~~~~-----------------------------------i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~ 325 (442)
||+++++.+. +...+.. .....++.++|..|......|+.+
T Consensus 226 gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~p~~a~l~~rgl~TL--- 301 (437)
T PRK05613 226 GGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAG-LLRDTGATLSPFNAWVTAQGLDTL--- 301 (437)
T ss_pred eEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHH-HHHhcCCCCCHHHHHHHHcccCcH---
Confidence 5777753220 0000000 011235677889887766665544
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCc
Q 013461 326 PDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 326 ~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
+-++++..++...+.+.|++.|.+
T Consensus 302 ~lR~~~~~~nA~~lA~~L~~hp~V 325 (437)
T PRK05613 302 SLRLERHNENAIKVAEFLNNHEKV 325 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCc
Confidence 446777788888888888877654
No 333
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.40 E-value=7.9e-11 Score=114.75 Aligned_cols=209 Identities=16% Similarity=0.156 Sum_probs=137.0
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHH----HHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNG----LYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~----~~l~g~~v~~~~~~d~~~L 228 (442)
.+.+..||+.+|++-|.+.++.|+||..|+..++.++.++||.|++.+..|+.+..- ++..|.++.+++..+.+.+
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~ 141 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEAL 141 (396)
T ss_pred CccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHH
Confidence 466789999999999999999999999999999999999999999988888776543 3446788888876666555
Q ss_pred HHHHHh-hccc-------ccc------------cccccc---cccCCCccccccCCCCCceeEEEEeccccccC----CC
Q 013461 229 RNTLER-VTAD-------NKR------------SNSFGV---LGRSGRGLTEHCGVPVDKIDIVTAAMGHALAT----EG 281 (442)
Q Consensus 229 e~~l~~-~~~~-------~~~------------a~~~g~---~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~----~G 281 (442)
++.+.+ .++- ++. +|..|+ +..|...-.-...+ ...+||++.|.+|.+|. .|
T Consensus 142 ~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL-~~GaDIVvhSaTKyl~GHsDvl~ 220 (396)
T COG0626 142 EAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPL-ELGADIVVHSATKYLGGHSDVLG 220 (396)
T ss_pred HHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChh-hcCCCEEEEeccccccCCcceee
Confidence 555543 2221 010 444432 12222111111111 24579999999999973 35
Q ss_pred cEEEcCHHhHHHHH-hhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-eecC-----
Q 013461 282 GFCTGSARVVDHQR-LSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IASN----- 354 (442)
Q Consensus 282 G~v~g~~~~i~~l~-~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~----- 354 (442)
|.++++.+.+..+. ..... ..++.+.|.-+...+..++.+ .-++++..++...+.+.|.+.|.++ +.-+
T Consensus 221 G~v~~~~~~~~~~~~~~~~~-~~G~~l~p~dA~l~lRGlkTL---~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~sh 296 (396)
T COG0626 221 GVVLTPNEELYELLFFAQRA-NTGAVLSPFDAWLLLRGLRTL---ALRMERHNENALKIAEFLADHPKVKKVYYPGLPSH 296 (396)
T ss_pred eEEecChHHHHHHHHHHHHh-hcCCCCCHHHHHHHHhccchH---HHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCC
Confidence 88887665544432 22111 245667888877766666655 3466777778888888887655443 2111
Q ss_pred -----------CCCCEEEEEecC
Q 013461 355 -----------PESPIVFLILEK 366 (442)
Q Consensus 355 -----------~~~~i~~~~~~~ 366 (442)
..+.++.+.++.
T Consensus 297 p~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 297 PGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred CcHHHHHHhcCCCceEEEEEeCC
Confidence 146788888853
No 334
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.40 E-value=4.7e-11 Score=115.15 Aligned_cols=315 Identities=17% Similarity=0.175 Sum_probs=170.3
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAI 186 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai 186 (442)
-|+|..+..+ .+|+|.+|+.+.+.+ ||+.... ..++...+..++.++.+|++.|.+ +++|++++|+++..++
T Consensus 45 vyld~~at~p----~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl 119 (428)
T KOG1549|consen 45 VYLDNQATGP----MDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVL 119 (428)
T ss_pred EEEecCcCCC----CCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHH
Confidence 4666655443 368999999999987 3443332 234455667899999999999964 5666667789999988
Q ss_pred hhhc-cCCC----EEEeCCCchHHHHHHHH---hcCCeEEEecCC-----CHHHHHHHHHhhcccccc---ccccccc--
Q 013461 187 PCFC-KKGD----LIVADEGVHWGIQNGLY---LSRSTVVYFKHN-----DMDSLRNTLERVTADNKR---SNSFGVL-- 248 (442)
Q Consensus 187 ~a~~-~~gd----~Vi~~~~~h~s~~~~~~---l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~~---a~~~g~~-- 248 (442)
..+. ..+| +|+.-...|.++..+++ -.|..+.++|.+ |.+.+++.++..+..... ..-.|++
T Consensus 120 ~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P 199 (428)
T KOG1549|consen 120 KGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP 199 (428)
T ss_pred HHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCcccccc
Confidence 7653 3344 89999999999876654 457777777754 455555555553332111 0111111
Q ss_pred ------------------ccCCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhh----CCc---ee
Q 013461 249 ------------------GRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLS----SSG---YV 302 (442)
Q Consensus 249 ------------------G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~----~~~---~~ 302 (442)
..++.|-. ..+|..-++|+++.|.+|.+|..| |++.+++ ...+++.. +.+ ..
T Consensus 200 v~EI~~icr~~~v~v~~DaAQavG~i-~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~-~~~~~~~~p~~~GGgq~r~~ 277 (428)
T KOG1549|consen 200 VKEIVKICREEGVQVHVDAAQAVGKI-PVDVQELNADFLSISAHKIYGPPGIGALYVRR-KRPRLRVEPPLSGGGQERGL 277 (428)
T ss_pred HHHHHHHhCcCCcEEEeehhhhcCCc-cccHHHcCchheeeecccccCCCcceEEEEcc-CCCcccccCcccCCcccccc
Confidence 01111111 123333457999999999999886 8888876 11222211 100 01
Q ss_pred ccCCCcHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHhhcc-CCCceeecCCCC---CEEEEEecCCCCCchhhHHH
Q 013461 303 FSASLPPYLASAAITAIDVLEEN-PDLITKLKKNTAILRTGLSD-IHGLSIASNPES---PIVFLILEKSTGSMKNDLQL 377 (442)
Q Consensus 303 ~s~s~~p~~aaaa~aal~~l~~~-~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~ 377 (442)
.+++..+..+...-+|.+....+ ........++...+..++.. .+...+.+.+.+ ....+-+....+ ...
T Consensus 278 rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g-----~~~ 352 (428)
T KOG1549|consen 278 RSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEG-----ESL 352 (428)
T ss_pred ccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceeeecccccC-----cch
Confidence 12223333333333556655432 22223333455555555432 333333332221 223333321111 011
Q ss_pred HHHHHHHHHHhCCEEEeecc-Cc-------ccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 378 LEDIADWALKEDGVFVVTSK-RS-------MLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 378 ~~~i~~~~L~~~GV~v~~~~-~~-------~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+.+.-+..+. .|..+.... .| ..+.+....+|||++...+|++|++++++.+++.+...
T Consensus 353 ~~~~~~~~l~-s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~ 419 (428)
T KOG1549|consen 353 LMDLKDVALS-SGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLL 419 (428)
T ss_pred hhhhhhhhhc-ccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhc
Confidence 1111121222 233332211 00 00111123459999999999999999999999887654
No 335
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.39 E-value=4.8e-11 Score=117.78 Aligned_cols=205 Identities=17% Similarity=0.121 Sum_probs=131.5
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH----HHHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ----NGLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~----~~~~l~g~~v~~~~~~d~~~L 228 (442)
.+...+||+++|++.|.+.++.++||+.|+..++.++.++||.|++....|+.+. ..+...|.++.+++.++.+.+
T Consensus 63 ~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~ 142 (384)
T PRK06434 63 NPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSL 142 (384)
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhe
Confidence 4677899999999999999999999999999999999999999998776544433 445567888888876544433
Q ss_pred HHHHHh-hcc-------cccc------------cccccccccCCCccccccCCC-CCceeEEEEeccccccC----CCcE
Q 013461 229 RNTLER-VTA-------DNKR------------SNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALAT----EGGF 283 (442)
Q Consensus 229 e~~l~~-~~~-------~~~~------------a~~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~----~GG~ 283 (442)
+ +.. .++ .++. ++..+++-+.-.+ ..+.+-+ ....|+++.|.+|.++. .||.
T Consensus 143 ~--l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~lvVD~t~~-s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~ 219 (384)
T PRK06434 143 D--FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHENDVIVDATFA-SPYNQNPLDLGADVVIHSATKYISGHSDVVMGV 219 (384)
T ss_pred e--ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcCeEEECCCC-CcccCCchhcCCCEEEeecccccCCCCCceEEE
Confidence 3 111 010 0000 3333332221111 1111111 13579999999999953 2677
Q ss_pred EEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCce-eec--------
Q 013461 284 CTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLS-IAS-------- 353 (442)
Q Consensus 284 v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~-------- 353 (442)
++. ++++.+.++.... .++..++|+.|+.++..|+.+ +.++++-+++...+.+.|.+.|.++ +.-
T Consensus 220 vv~~~~~~~~~~~~~~~--~~G~~~~~~~A~l~~~gL~tL---~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~ 294 (384)
T PRK06434 220 AGTNNKSIFNNLVERRK--TLGSNPDPIQAYLALRGLKTL---GLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKK 294 (384)
T ss_pred EecCcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhCCCcH---HHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHH
Confidence 766 5566565553211 234556788877766665554 4577788888888999888765542 211
Q ss_pred --CCCCCEEEEEec
Q 013461 354 --NPESPIVFLILE 365 (442)
Q Consensus 354 --~~~~~i~~~~~~ 365 (442)
...++++.+.++
T Consensus 295 ~~~g~g~~~sf~l~ 308 (384)
T PRK06434 295 VLRGFGGMLSFELR 308 (384)
T ss_pred hcCCCCceEEEEEC
Confidence 124678888884
No 336
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.39 E-value=8.5e-11 Score=116.42 Aligned_cols=188 Identities=14% Similarity=0.134 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~Le 229 (442)
+...+||+++|++.|.+.+++++||+.|+..++ .++++||.|++.++.|++... .+...|.++..++..|+++++
T Consensus 50 p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~ 128 (380)
T PRK06176 50 PTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIK 128 (380)
T ss_pred hhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHH
Confidence 457899999999999999999999999998666 567999999999888876543 344567888888877888888
Q ss_pred HHHHhhcccccc---------------------cccccccccCCCccccccCCC-CCceeEEEEeccccccC----CCcE
Q 013461 230 NTLERVTADNKR---------------------SNSFGVLGRSGRGLTEHCGVP-VDKIDIVTAAMGHALAT----EGGF 283 (442)
Q Consensus 230 ~~l~~~~~~~~~---------------------a~~~g~~G~~g~g~~~~~~v~-~~~~diii~S~sK~lg~----~GG~ 283 (442)
+.+++.+..... .|+.-++-+.-.+. .+++.+ ....|+++.|++|.++. .||+
T Consensus 129 ~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~-~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~ 207 (380)
T PRK06176 129 KAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT-PYYQNPLLLGADIVVHSGTKYLGGHSDVVAGL 207 (380)
T ss_pred HhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc-cccCCccccCCCEEEecCceeccCCccceeeE
Confidence 877543221100 22222221111111 111111 13579999999999964 3687
Q ss_pred EEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCC
Q 013461 284 CTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHG 348 (442)
Q Consensus 284 v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g 348 (442)
+++ ++++.+.++.... ..+..++|..+......++.+ +.++++.+++...+.+.|++.|.
T Consensus 208 vv~~~~~~~~~~~~~~~--~~G~~~~~~~~~l~~~gl~tl---~~R~~~~~~~a~~la~~L~~~p~ 268 (380)
T PRK06176 208 VTTNNEALAQEIAFFQN--AIGGVLGPQDSWLLQRGIKTL---GLRMEAHQKNALCVAEFLEKHPK 268 (380)
T ss_pred EEecHHHHHHHHHHHHH--HhcCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHHHHHhCCC
Confidence 776 4566665543221 123344565544443333322 33555556666666666665443
No 337
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.35 E-value=8.6e-12 Score=122.40 Aligned_cols=199 Identities=19% Similarity=0.249 Sum_probs=129.5
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchH-HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC--------
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-------- 223 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~-~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-------- 223 (442)
.....+.++..|+.+|.+++.+..+|+ .+|.+++.+++++||.|++++.+|-|+..++.++|+++++++..
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~ 144 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIG 144 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BE
T ss_pred ccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCcc
Confidence 456789999999999999999998887 78999999999999999999999999999999999999877531
Q ss_pred --CH-----HHHHHHHHhhccccc---c--------------------ccccc--ccccCCCccccccC-CC----CCce
Q 013461 224 --DM-----DSLRNTLERVTADNK---R--------------------SNSFG--VLGRSGRGLTEHCG-VP----VDKI 266 (442)
Q Consensus 224 --d~-----~~Le~~l~~~~~~~~---~--------------------a~~~g--~~G~~g~g~~~~~~-v~----~~~~ 266 (442)
+. +++++.+++...... . .|..+ ++-+..+|....|. .+ .-..
T Consensus 145 ~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~ga 224 (417)
T PF01276_consen 145 GISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGA 224 (417)
T ss_dssp EB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTS
T ss_pred CCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhccC
Confidence 34 788888887654322 1 22222 22222222221111 00 1224
Q ss_pred e-------EEEEeccccccC--CCcEEEcCHHh-H--HHHHhhCCceec-cCCCcHHHHHHHHHHHHHH-h-cChHHHHH
Q 013461 267 D-------IVTAAMGHALAT--EGGFCTGSARV-V--DHQRLSSSGYVF-SASLPPYLASAAITAIDVL-E-ENPDLITK 331 (442)
Q Consensus 267 d-------iii~S~sK~lg~--~GG~v~g~~~~-i--~~l~~~~~~~~~-s~s~~p~~aaaa~aal~~l-~-~~~~~~~~ 331 (442)
| +++.|.+|.+++ .++++..+.+. + +.++.. -.++ |+|++-+.+|..-.+.+++ . +..++.++
T Consensus 225 d~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~--l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~ 302 (417)
T PF01276_consen 225 DRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA--LSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEE 302 (417)
T ss_dssp S-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH--HHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred ccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH--HHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 5 999999999974 35666544432 3 333222 1233 4444445555555677777 2 34568888
Q ss_pred HHHHHHHHHHhh---ccCCCceeec
Q 013461 332 LKKNTAILRTGL---SDIHGLSIAS 353 (442)
Q Consensus 332 l~~~~~~l~~~L---~~~~g~~~~~ 353 (442)
..++.+.+++.| ++++++++..
T Consensus 303 ~i~~a~~~R~~i~~~~~~~~~~~~~ 327 (417)
T PF01276_consen 303 AIELAEEFRKKINRLNDIWGFKVLG 327 (417)
T ss_dssp HHHHHHHHHHHHHHHCCT-SSEESS
T ss_pred HHHHHHHHHHHHHhcCCCceEecCC
Confidence 888999999998 5666666543
No 338
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.34 E-value=2.5e-10 Score=118.78 Aligned_cols=271 Identities=17% Similarity=0.216 Sum_probs=164.7
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchH-HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC--C------
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--N------ 223 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~-~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~--~------ 223 (442)
.....+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++|+.+|-|+..++.++|++++++.. |
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g 273 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG 273 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence 456689999999999999998888885 7899999999999999999999999999999999999998742 1
Q ss_pred --C-----HHHHHHHHHhhcccc--cc--------------------cccccc-cccCCCcccccc--------CC----
Q 013461 224 --D-----MDSLRNTLERVTADN--KR--------------------SNSFGV-LGRSGRGLTEHC--------GV---- 261 (442)
Q Consensus 224 --d-----~~~Le~~l~~~~~~~--~~--------------------a~~~g~-~G~~g~g~~~~~--------~v---- 261 (442)
+ .+.+++.+++..... +. ..+.-. +-+..+|....| .+
T Consensus 274 ~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~g~~~ilvDEAhgah~~F~p~~~~~sam~~~~ 353 (713)
T PRK15399 274 GIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER 353 (713)
T ss_pred CCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHhCCCEEEEeccchhhhhcCcccCCcChhhCCC
Confidence 2 378888888765321 01 001111 111222221111 11
Q ss_pred CCCceeEEEEeccccccC--CCcEEEcCHHhHHHHHhhCCceeccCCCcHH-HHHHHHHHHHHHh--cChHHHHHHHHHH
Q 013461 262 PVDKIDIVTAAMGHALAT--EGGFCTGSARVVDHQRLSSSGYVFSASLPPY-LASAAITAIDVLE--ENPDLITKLKKNT 336 (442)
Q Consensus 262 ~~~~~diii~S~sK~lg~--~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~-~aaaa~aal~~l~--~~~~~~~~l~~~~ 336 (442)
.+|-+++++.|.+|.+++ .+.++..+.. +++-+....-.++.++.|.+ .+|..-.+..+++ ....+.++..+..
T Consensus 354 ~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a 432 (713)
T PRK15399 354 VPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERA 432 (713)
T ss_pred CCCeeeeeeeehhccccccchheeeeecCC-CCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 122234449999999974 3456544433 23222111112334344444 4444446666675 3466778888888
Q ss_pred HHHHHhhccCCC------ceeecCC---C-------------------------CCEEE-EEecC--CCCCchhhHHHHH
Q 013461 337 AILRTGLSDIHG------LSIASNP---E-------------------------SPIVF-LILEK--STGSMKNDLQLLE 379 (442)
Q Consensus 337 ~~l~~~L~~~~g------~~~~~~~---~-------------------------~~i~~-~~~~~--~~~~~~~~~~~~~ 379 (442)
..+++.|.++.+ +++..+. . -|+-. +..+. ..+..........
T Consensus 433 ~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~ 512 (713)
T PRK15399 433 LHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAA 512 (713)
T ss_pred HHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHH
Confidence 888888876544 3443210 0 11111 11110 0000000011122
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
.+. +.|+++||.+-.... ..+-+.++...|++++++++++|.++-
T Consensus 513 ~l~-~~L~e~gI~~E~~d~---------~~vL~l~s~g~t~~~~~~L~~aL~~f~ 557 (713)
T PRK15399 513 LVA-KFLDERGIVVEKTGP---------YNLLFLFSIGIDKTKAMGLLRGLTEFK 557 (713)
T ss_pred HHH-HHHHHcCCEEEecCC---------CeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 344 467888998776543 338888888999999999999998763
No 339
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.32 E-value=8.4e-11 Score=104.84 Aligned_cols=258 Identities=17% Similarity=0.163 Sum_probs=157.6
Q ss_pred HHHHHHHhhhC-CCcEEEEcchH-HHHHhhhhhhccCC-CEEEeCCCchHHHHHHHHhcCCeEEEecCC-----CHHHHH
Q 013461 158 DCEARIAKFLG-TPDSILYSYGL-STMFSAIPCFCKKG-DLIVADEGVHWGIQNGLYLSRSTVVYFKHN-----DMDSLR 229 (442)
Q Consensus 158 ~le~~lA~~~g-~e~~i~~~sG~-~a~~~ai~a~~~~g-d~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-----d~~~Le 229 (442)
++...++.--+ ..+-|....|+ +.+.+.|++.+.|| +.|+.-.+++..+.-.+...++.++.++.+ |.+.+.
T Consensus 73 ~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~ 152 (375)
T KOG0633|consen 73 RLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIA 152 (375)
T ss_pred hhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHH
Confidence 45555554444 34567777777 78899999999999 557766777765555556678888888754 455665
Q ss_pred HHHHhhccc---------ccc----------------ccccccccc-----CCCccccccCCCCCceeEEEEeccccccC
Q 013461 230 NTLERVTAD---------NKR----------------SNSFGVLGR-----SGRGLTEHCGVPVDKIDIVTAAMGHALAT 279 (442)
Q Consensus 230 ~~l~~~~~~---------~~~----------------a~~~g~~G~-----~g~g~~~~~~v~~~~~diii~S~sK~lg~ 279 (442)
+.++....- ++. ..++-++.+ .|.+..-.+ +.....-+++.||||++|.
T Consensus 153 evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~l-V~kYpNLivlqTlSKsfGL 231 (375)
T KOG0633|consen 153 EVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKL-VKKYPNLIVLQTLSKSFGL 231 (375)
T ss_pred HHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchH-hHhCCceeehhhhhhhcCc
Confidence 555543110 000 112212211 110000000 1111235788999999998
Q ss_pred CC---cEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHH--HHhcChHHHHHHHHHHHHHHHhhccCCCce-eec
Q 013461 280 EG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAID--VLEENPDLITKLKKNTAILRTGLSDIHGLS-IAS 353 (442)
Q Consensus 280 ~G---G~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~--~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~ 353 (442)
.| ||++.+.++++.+.....+|..|...+ .+|++|+. -.+.....++.+.+.+.+|...|.+++++. +.+
T Consensus 232 AGiRvG~~~~~~~ia~iln~~KaPYNiS~~~s----~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~g 307 (375)
T KOG0633|consen 232 AGIRVGYGAFPLSIAEILNRAKAPYNISVAGS----VAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPG 307 (375)
T ss_pred ceeEeecccccHHHHHHHHhccCCccccchhH----HHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCC
Confidence 87 999999999999987778887665322 22334443 222234466667777788888888887654 444
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 354 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 354 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
...++|+.+.+... +...+..+..+.+.+.||.|+-..... . ..+.+||++. |+||-+.+++.++++
T Consensus 308 g~daNFiLi~v~~~------~n~~akkly~q~at~~gVvVRfrgse~--~--c~G~lRitvG---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 308 GSDANFILIEVTGG------DNGMAKKLYKQDATKMGVVVRFRGSEE--G--CKGYLRITVG---TPEENTVLMKCLKQF 374 (375)
T ss_pred cccccEEEEEEcCC------CcHHHHHHHHHHHHhcceEEEEcCCcc--c--cceeEEEEcC---CcccchHHHHHHHhh
Confidence 56788888888532 222233444444556799887533211 1 1245999997 788888888888875
No 340
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.31 E-value=2.8e-10 Score=120.83 Aligned_cols=278 Identities=15% Similarity=0.122 Sum_probs=159.1
Q ss_pred cccCcHHHHHHHHHHHhhhCCCcEEEEc-chHHHHHhhhhhhc--------cCCCEEEeCCCchHHHHHHHHhcCCeEEE
Q 013461 149 FYGTIDVHLDCEARIAKFLGTPDSILYS-YGLSTMFSAIPCFC--------KKGDLIVADEGVHWGIQNGLYLSRSTVVY 219 (442)
Q Consensus 149 ~~g~~~~~~~le~~lA~~~g~e~~i~~~-sG~~a~~~ai~a~~--------~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~ 219 (442)
..|+.+...++++.+++++|.+.+-++. +|+.+..+++.++. ...++|+++...|++....+...|.+++.
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~ 617 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVI 617 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEE
Confidence 4578889999999999999999887776 67766655554432 23467899999996655557778999988
Q ss_pred ecCC-----CHHHHHHHHHhhcccccc----------------------ccccccc-ccCCCccccccCCC---CCceeE
Q 013461 220 FKHN-----DMDSLRNTLERVTADNKR----------------------SNSFGVL-GRSGRGLTEHCGVP---VDKIDI 268 (442)
Q Consensus 220 ~~~~-----d~~~Le~~l~~~~~~~~~----------------------a~~~g~~-G~~g~g~~~~~~v~---~~~~di 268 (442)
++.+ |+++|++.+++..++... +|..|.+ --+|.-...+.++. .-+.|+
T Consensus 618 Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi 697 (954)
T PRK12566 618 VECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADV 697 (954)
T ss_pred eccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCE
Confidence 8763 788999988744333221 3322221 00011111112222 235799
Q ss_pred EEEeccccccCC---C----cEEEcCHHhHHHHHhhC-------CceeccCCCcHH-HHHHHHHHHHHHhc-ChHHH---
Q 013461 269 VTAAMGHALATE---G----GFCTGSARVVDHQRLSS-------SGYVFSASLPPY-LASAAITAIDVLEE-NPDLI--- 329 (442)
Q Consensus 269 ii~S~sK~lg~~---G----G~v~g~~~~i~~l~~~~-------~~~~~s~s~~p~-~aaaa~aal~~l~~-~~~~~--- 329 (442)
+.++++|+||.+ | |.+...+.+...++... .+..-..+..+. .+..+.+++.++.. ..++.
T Consensus 698 ~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa 777 (954)
T PRK12566 698 SHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADAS 777 (954)
T ss_pred EEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHH
Confidence 999999999632 2 34444554545554221 000001111111 11223344444442 23322
Q ss_pred HHHHHHHHHHHHhhccCCCceeecCCCCCEEE---EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCC
Q 013461 330 TKLKKNTAILRTGLSDIHGLSIASNPESPIVF---LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL 406 (442)
Q Consensus 330 ~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~ 406 (442)
.....+..|+.+.|.+..++.+. +...++++ +.+..-.... .....++.++++ +.||......+|.
T Consensus 778 ~~ailnAnYla~rL~~~~~v~~~-~~~~~~~hEfii~~~~l~~~~---g~~~~dvakRL~-d~Gihapt~~fPv------ 846 (954)
T PRK12566 778 EVAILSANYLANQLGGAFPVLYR-GRNERVAHECILDLRPLKAQT---GISEEDVAKRLM-DYGFHAPTMSFPV------ 846 (954)
T ss_pred HHHHHHHHHHHHHhHhhCCCCcC-CCCCCeeeEEEEEcccccccc---CCCHHHHHHHHH-HCCcEEeEEeecc------
Confidence 22245788999999764333332 22233222 1221100000 011246788766 6699866533321
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 407 PVGIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 407 ~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+..+|++++-..|++|||+++++++.+.+++
T Consensus 847 ~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 847 PGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred CCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999999987764
No 341
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.31 E-value=4.8e-10 Score=116.81 Aligned_cols=273 Identities=19% Similarity=0.180 Sum_probs=162.1
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchH-HHHHhhhhhhccCCCEEEeCCCchHHHHHH-HHhcCCeEEEecC--C-----
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNG-LYLSRSTVVYFKH--N----- 223 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~-~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~-~~l~g~~v~~~~~--~----- 223 (442)
.....+.++..|+.+|.+++.+..+|+ .+|.+++.+.+++||.|++++.+|-|+..+ +.++|++++++.. |
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~ 252 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFI 252 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCc
Confidence 355689999999999999998888876 789999999999999999999999999996 9999999988642 1
Q ss_pred ---C-----HHHHHHHHHhhccc-------ccc----------------------cccccc-cccCCCcccccc-----C
Q 013461 224 ---D-----MDSLRNTLERVTAD-------NKR----------------------SNSFGV-LGRSGRGLTEHC-----G 260 (442)
Q Consensus 224 ---d-----~~~Le~~l~~~~~~-------~~~----------------------a~~~g~-~G~~g~g~~~~~-----~ 260 (442)
+ .+.+++.+++..+. .+. .|..+. +-+..+|....| +
T Consensus 253 g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~~llvDEAhgah~~F~p~~~~ 332 (720)
T PRK13578 253 GGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMAD 332 (720)
T ss_pred CCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCCcEEEeCcchhhhccCccccc
Confidence 2 34588888776221 111 122211 111222221111 0
Q ss_pred CC----CCcee----EEEEeccccccC--CCcEEEcCHHhH-------HHHHhhCCceeccCCCcHHHHHHHH-HHHHHH
Q 013461 261 VP----VDKID----IVTAAMGHALAT--EGGFCTGSARVV-------DHQRLSSSGYVFSASLPPYLASAAI-TAIDVL 322 (442)
Q Consensus 261 v~----~~~~d----iii~S~sK~lg~--~GG~v~g~~~~i-------~~l~~~~~~~~~s~s~~p~~aaaa~-aal~~l 322 (442)
.+ ....| +++.|.+|.+++ .+.++..+...+ ++-+....-.++.++.|.+...|.+ .+-.++
T Consensus 333 ~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m 412 (720)
T PRK13578 333 CSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVNAKMH 412 (720)
T ss_pred CChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Confidence 10 01235 999999999973 345554433222 1211111112343444444433333 445555
Q ss_pred h--cChHHHHHHHHHHHHHHHhh-ccCCCceeecCC--------------------------C----------------C
Q 013461 323 E--ENPDLITKLKKNTAILRTGL-SDIHGLSIASNP--------------------------E----------------S 357 (442)
Q Consensus 323 ~--~~~~~~~~l~~~~~~l~~~L-~~~~g~~~~~~~--------------------------~----------------~ 357 (442)
+ ...++.++..+....+++.| +.++++++..+. + -
T Consensus 413 ~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 492 (720)
T PRK13578 413 EGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVD 492 (720)
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccccccccccccC
Confidence 4 34667888888888888888 555566554210 0 0
Q ss_pred CEEE-EEecC-C--CCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 358 PIVF-LILEK-S--TGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 358 ~i~~-~~~~~-~--~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
|+-. +.... . .|......--...+.+ .|+++||.+-.... ..+-+.++...|++++++++++|.++
T Consensus 493 P~KltI~t~G~~~~~G~~~~~Gipg~~l~~-~L~e~gI~~E~~d~---------~~vL~l~s~g~t~~~~~~Lv~aL~~f 562 (720)
T PRK13578 493 PCKLLLTTPGIDAETGEYEDFGIPATILAN-YLRENGIVPEKCDL---------NSILFLLTPAEDMAKLQQLVAMLARF 562 (720)
T ss_pred CceEEEEcCCcCcccccccccCccHHHHHH-HHHHcCCEEEecCC---------CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 1111 11100 0 0000000000223444 67666998765433 23788888889999999999999887
Q ss_pred HH
Q 013461 434 SA 435 (442)
Q Consensus 434 ~~ 435 (442)
-+
T Consensus 563 ~~ 564 (720)
T PRK13578 563 EK 564 (720)
T ss_pred HH
Confidence 43
No 342
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.30 E-value=3.7e-10 Score=111.27 Aligned_cols=293 Identities=13% Similarity=0.089 Sum_probs=160.1
Q ss_pred ChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHHHHHHhhhCCC---cEEEE-cchHHHHHhhhhhhccCCCEEEeC
Q 013461 125 HEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP---DSILY-SYGLSTMFSAIPCFCKKGDLIVAD 199 (442)
Q Consensus 125 ~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e---~~i~~-~sG~~a~~~ai~a~~~~gd~Vi~~ 199 (442)
+|+|.+++.+.... .+.+ +|.- --.+...+.++.++++++.+ +++++ ++|+.++..++..+..+ +.+++.
T Consensus 15 ~~~v~~a~~~~~~~~~~~~---hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~ 89 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTS---HRQA-PVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLS 89 (361)
T ss_pred CHHHHHHHHhcCccccccC---cCCh-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEe
Confidence 58888886643111 1111 1211 12477889999999999962 35554 55899999998887643 333333
Q ss_pred CCchHHHHHHH-Hh--cCCeEEEecCCCHHHHHHHHHhhcccccc---ccccccc------cc--------CCCcccccc
Q 013461 200 EGVHWGIQNGL-YL--SRSTVVYFKHNDMDSLRNTLERVTADNKR---SNSFGVL------GR--------SGRGLTEHC 259 (442)
Q Consensus 200 ~~~h~s~~~~~-~l--~g~~v~~~~~~d~~~Le~~l~~~~~~~~~---a~~~g~~------G~--------~g~g~~~~~ 259 (442)
.+.|.+-+.-. .. ...++..++...-++++..+...++.... ....|+. .+ ++.....+.
T Consensus 90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I~~~~g~~~iVDavqs~g~~ 169 (361)
T TIGR01366 90 FGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRPEGSDDALVVIDATSGAGGL 169 (361)
T ss_pred cCHHHHHHHHHHHhhhccCCceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccccccCCCeEEEEcCccccCC
Confidence 45554433222 11 11234443322112222211111110000 2222221 00 111111223
Q ss_pred CCCCCceeEEEEeccccccCCCcE--EEcCHHhHHHHHhhCCc------ee------------ccCCCcHHH-HHHHHHH
Q 013461 260 GVPVDKIDIVTAAMGHALATEGGF--CTGSARVVDHQRLSSSG------YV------------FSASLPPYL-ASAAITA 318 (442)
Q Consensus 260 ~v~~~~~diii~S~sK~lg~~GG~--v~g~~~~i~~l~~~~~~------~~------------~s~s~~p~~-aaaa~aa 318 (442)
.++.+++|+++.|-.|++|..||+ ++.+++.++.+.....+ +. .+...|+.. ..+..++
T Consensus 170 ~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~a 249 (361)
T TIGR01366 170 PVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQ 249 (361)
T ss_pred CCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHH
Confidence 344456899999999999987654 45688887766522110 10 112223333 3355578
Q ss_pred HHHHhcC---hHHHHHHHHHHHHHHHhhccCCCceeecC-C--CCCEEE-EEecCCCCCchhhHHHHHHHHHHHHHhCCE
Q 013461 319 IDVLEEN---PDLITKLKKNTAILRTGLSDIHGLSIASN-P--ESPIVF-LILEKSTGSMKNDLQLLEDIADWALKEDGV 391 (442)
Q Consensus 319 l~~l~~~---~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~--~~~i~~-~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV 391 (442)
++.+++. +.+.++.+++.+++++.|.+.++++.... . .++.+. +.+. .+. ...++.+. |+++||
T Consensus 250 l~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~--~g~------~~~~v~~~-L~~~gI 320 (361)
T TIGR01366 250 IDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV--DDI------DAATVAKI-LRANGI 320 (361)
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC--Ccc------CHHHHHHH-HHHCCC
Confidence 8887643 44568888999999999998754554321 1 244333 2221 111 12356664 566799
Q ss_pred EEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 392 FVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 392 ~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.+.++... .. +..+|+++...+|++|+++++++|++++++
T Consensus 321 ~i~~~~~~-l~----~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 321 VDTEPYRK-LG----RNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred eeccCccc-cC----CCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 98654321 11 235999999999999999999999997654
No 343
>PLN02880 tyrosine decarboxylase
Probab=99.29 E-value=3.3e-09 Score=108.24 Aligned_cols=280 Identities=11% Similarity=0.103 Sum_probs=166.1
Q ss_pred CcHHHHHHHHHHHhhhCCCc---------EEEEcchHHHHHhhhhhhcc-----------CCCEEEeCCCchHHHHHHHH
Q 013461 152 TIDVHLDCEARIAKFLGTPD---------SILYSYGLSTMFSAIPCFCK-----------KGDLIVADEGVHWGIQNGLY 211 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~---------~i~~~sG~~a~~~ai~a~~~-----------~gd~Vi~~~~~h~s~~~~~~ 211 (442)
...+..++-+.+++++|.++ .+++++|+++|..++.+... +.-+|++++..|.++.+++.
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 45666777788888888653 57888899999887754321 12257788999999999999
Q ss_pred hcCCe---EEEecC-------CCHHHHHHHHHhhcccccc---------------------------ccccccc--ccCC
Q 013461 212 LSRST---VVYFKH-------NDMDSLRNTLERVTADNKR---------------------------SNSFGVL--GRSG 252 (442)
Q Consensus 212 l~g~~---v~~~~~-------~d~~~Le~~l~~~~~~~~~---------------------------a~~~g~~--G~~g 252 (442)
+.|.. ++.++. .|+++|++.+++....... .|++-+. |..|
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~g 279 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYA 279 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhH
Confidence 98863 444443 2788999988765322111 2222111 1112
Q ss_pred Cccc--cc-----cCCCCCceeEEEEeccccccCC-C-cEEEcCH-H-hHHHHHhhCCceeccC------CCc-------
Q 013461 253 RGLT--EH-----CGVPVDKIDIVTAAMGHALATE-G-GFCTGSA-R-VVDHQRLSSSGYVFSA------SLP------- 308 (442)
Q Consensus 253 ~g~~--~~-----~~v~~~~~diii~S~sK~lg~~-G-G~v~g~~-~-~i~~l~~~~~~~~~s~------s~~------- 308 (442)
.+.. .. .|+ ...|-++.+++|.++.+ | |++..++ . .++.+... ..|.... ..+
T Consensus 280 g~~~~~~~~~~~l~gi--e~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~-~~Yl~~~~~~~~~~~~~~~~~i~ 356 (490)
T PLN02880 280 GSACICPEYRHYIDGV--EEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTN-PEFLKNKASQANSVVDYKDWQIP 356 (490)
T ss_pred HHHHhCHHHHHHhcCc--hhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccC-HHHhcCccccccCCCChhccCcC
Confidence 2211 11 122 35689999999999754 2 6665543 2 22222111 1121110 000
Q ss_pred ---HHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 309 ---PYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 309 ---p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
.+-+.....+++.+-. ..++.++..++.+++.+.|.+.+++++..++..+++.+.+.......+.......++.+
T Consensus 357 ~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~ 436 (490)
T PLN02880 357 LGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLD 436 (490)
T ss_pred CCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHH
Confidence 0111222233444322 12344444489999999998888999988778888888875432111111233456667
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCC-HHHHHHHHHHHHHHHHHHhhc
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHS-EADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t-~eei~~~i~~l~~~~~~~~~~ 440 (442)
++.++..++++...... ...+|+++....| ++|++.+++.|.++..+++.+
T Consensus 437 ~l~~~g~~~v~~t~~~g------~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 437 AVNSSGKIFISHTVLSG------KYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGK 488 (490)
T ss_pred HHHhCCCEEEEEEEECC------EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 66666667776653321 1349999977665 599999999999998887654
No 344
>PLN02452 phosphoserine transaminase
Probab=99.27 E-value=4.4e-09 Score=103.15 Aligned_cols=304 Identities=18% Similarity=0.185 Sum_probs=180.7
Q ss_pred eEEEeecCCCCCCC-CChHHHHHHHHHHHhcCC-C----CCccCccccCcHHHHHHHHHHHhhhCCC---cEEEE-cchH
Q 013461 110 EVVNFASANYLGLI-GHEKLLESCTSALEKYGV-G----SCGPRGFYGTIDVHLDCEARIAKFLGTP---DSILY-SYGL 179 (442)
Q Consensus 110 ~~id~~s~~~l~~~-~~p~v~ea~~~~l~~~g~-~----~~~~~~~~g~~~~~~~le~~lA~~~g~e---~~i~~-~sG~ 179 (442)
+.+||+- |.. -+++|++++.+.+.+|.. | .-++|.- --.++..+.++.|.++++.+ +++++ ++|+
T Consensus 7 ~~~~f~p----GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~-~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSA----GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK-EFLSIIQKAEADLRELLDIPDNYEVLFLQGGAS 81 (365)
T ss_pred ceEeeeC----CCCCCCHHHHHHHHHHHhcccccCccccccCCCch-HHHHHHHHHHHHHHHHhCCCCCceEEEEeCccH
Confidence 3566642 222 268999999988776531 1 1112211 12477889999999999964 35555 5677
Q ss_pred HHHHhhhhhhccCCCE-EEeCCCchHHH-HHHHHhcCCeEEEe--cCCC---HHHHHHHHHhhcccccc------ccccc
Q 013461 180 STMFSAIPCFCKKGDL-IVADEGVHWGI-QNGLYLSRSTVVYF--KHND---MDSLRNTLERVTADNKR------SNSFG 246 (442)
Q Consensus 180 ~a~~~ai~a~~~~gd~-Vi~~~~~h~s~-~~~~~l~g~~v~~~--~~~d---~~~Le~~l~~~~~~~~~------a~~~g 246 (442)
.++++++..++.+||. .++..+.++.- .+-++..|...+.. +..+ +.+++++ +. .+.... ..+.|
T Consensus 82 ~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~v~~~hnETstG 159 (365)
T PLN02452 82 TQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW-EL-TPDAKFVHICANETIHG 159 (365)
T ss_pred HHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc-CC-CCCCcEEEECCCCCCCc
Confidence 8899988888888885 45556655542 23333344332222 1221 2333332 21 111111 22333
Q ss_pred cc-------cc-----CCCccccccCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCcee----------c
Q 013461 247 VL-------GR-----SGRGLTEHCGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGYV----------F 303 (442)
Q Consensus 247 ~~-------G~-----~g~g~~~~~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~~~----------~ 303 (442)
+. ++ ++.....+..++.++.++...|..|.+|.+| |+++.++++++........+. .
T Consensus 160 v~~~~~~~i~~~~lvVDa~Ss~g~~pidv~~~~v~~~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~ 239 (365)
T PLN02452 160 VEFKDYPDVGNVPLVADMSSNFLSKPVDVSKYGVIYAGAQKNVGPSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSL 239 (365)
T ss_pred EecCcccccCCCeEEEECCccccCcccCHHHcCEEEEecccccCCCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCc
Confidence 31 10 0111111122333455666789999999887 899999998876543211110 0
Q ss_pred cCCCcHHHHHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHhhccCCCceee-cC--CCCC-EEEEEecCCCCCchhhHH
Q 013461 304 SASLPPYLASAAITAIDVLEE---NPDLITKLKKNTAILRTGLSDIHGLSIA-SN--PESP-IVFLILEKSTGSMKNDLQ 376 (442)
Q Consensus 304 s~s~~p~~aaaa~aal~~l~~---~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~--~~~~-i~~~~~~~~~~~~~~~~~ 376 (442)
-.++|-....+..++++++++ .+.+.++.+++.+++++.|++.+|+... .+ ..++ .+.+.++.. .
T Consensus 240 ~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~--------~ 311 (365)
T PLN02452 240 YNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS--------E 311 (365)
T ss_pred cCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc--------h
Confidence 022344445556688988864 2467888999999999999887676111 11 1244 566665331 1
Q ss_pred HHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 377 LLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 377 ~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
+..++.+. ++++|+...+++... .++|+++-..++.++++.+++.++++.++
T Consensus 312 ~~~~f~~~-~~~~g~~~~~G~r~~-------gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 312 LEAEFVKE-AAKAGMVQLKGHRSV-------GGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred hHHHHHHH-HHHCCCcccCCcccc-------CceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 34467775 677799988776532 34999999999999999999999987543
No 345
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.22 E-value=3.3e-09 Score=103.83 Aligned_cols=311 Identities=14% Similarity=0.104 Sum_probs=181.0
Q ss_pred eEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhh
Q 013461 110 EVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCF 189 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~ 189 (442)
-+|||-|-...+. ..++..+||.. |. -.||..+-..+||+.+++++|.+.++.+.+|..+...+++.+
T Consensus 42 V~IDLrSDTgT~a-pS~~m~aAM~~-----GD------D~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~ 109 (467)
T TIGR02617 42 VFIDLLTDSGTGA-VTQSMQAAMMR-----GD------EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVL 109 (467)
T ss_pred eEEECccCCCCCC-CCHHHHHHHHc-----CC------cccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhh
Confidence 4788855432221 35777777764 21 123344445699999999999999999999999999999999
Q ss_pred cc-CCCEEEeCCC-------chHHH-HHHHHhcCCeEEEe--------------c-CCCHHHHHHHHHhhcccccc----
Q 013461 190 CK-KGDLIVADEG-------VHWGI-QNGLYLSRSTVVYF--------------K-HNDMDSLRNTLERVTADNKR---- 241 (442)
Q Consensus 190 ~~-~gd~Vi~~~~-------~h~s~-~~~~~l~g~~v~~~--------------~-~~d~~~Le~~l~~~~~~~~~---- 241 (442)
++ |||.+.++.. +|+-. ...+.++|+.++.+ + ..|+++|++.++........
T Consensus 110 ~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~ 189 (467)
T TIGR02617 110 IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA 189 (467)
T ss_pred cccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence 88 7888876553 34443 23467788776543 1 12788999999864321110
Q ss_pred -------------------------cccccccccCCCcccc-----------ccCCCC--------CceeEEEEeccccc
Q 013461 242 -------------------------SNSFGVLGRSGRGLTE-----------HCGVPV--------DKIDIVTAAMGHAL 277 (442)
Q Consensus 242 -------------------------a~~~g~~G~~g~g~~~-----------~~~v~~--------~~~diii~S~sK~l 277 (442)
.|++-+.=+ |.-+.+ +.++++ +-.|.++.|++|.+
T Consensus 190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLD-gARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKgl 268 (467)
T TIGR02617 190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMD-SARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_pred eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEE-hHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCC
Confidence 333322111 111111 122321 34589999999999
Q ss_pred cCC-CcEEEcCHH----hHHHHHhhC---CceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCc
Q 013461 278 ATE-GGFCTGSAR----VVDHQRLSS---SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGL 349 (442)
Q Consensus 278 g~~-GG~v~g~~~----~i~~l~~~~---~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~ 349 (442)
|.. ||+++++++ +.+..+... -+|.-.+.++.--+.+....|+..-+ .+....-.+..++|.+.|.+. |+
T Consensus 269 gApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~-~~yl~~ri~qv~yl~~~L~~~-Gv 346 (467)
T TIGR02617 269 MVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN-LDWLAYRINQVQYLVNGLEEI-GV 346 (467)
T ss_pred CCcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhccc-HHHHHHHHHHHHHHHHHHHhC-CC
Confidence 865 899999876 222322221 12222223443333222223332222 234444455678999999886 99
Q ss_pred eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccC------cccccCCCC--CceEEEecC-CCCH
Q 013461 350 SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR------SMLDKCRLP--VGIRLFVSA-AHSE 420 (442)
Q Consensus 350 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~------~~~~~~~~~--~~iRi~~~~-~~t~ 420 (442)
++.. .++.-+++..+.-....+.+..-++.++..+..+.||-..-... +.......| .-+|++++. .-|.
T Consensus 347 pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~ 425 (467)
T TIGR02617 347 VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQ 425 (467)
T ss_pred cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccH
Confidence 8876 67777777643211111122233456666666677875332211 111111111 349999885 4689
Q ss_pred HHHHHHHHHHHHHHHH
Q 013461 421 ADLVKACESLKRISAV 436 (442)
Q Consensus 421 eei~~~i~~l~~~~~~ 436 (442)
+++|.+++++..+.++
T Consensus 426 ~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 426 THMDFIIEAFKHVKEN 441 (467)
T ss_pred hHHHHHHHHHHHHHhh
Confidence 9999999999887543
No 346
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.21 E-value=3.7e-09 Score=105.61 Aligned_cols=270 Identities=15% Similarity=0.163 Sum_probs=161.5
Q ss_pred cHHHHHHHHHHHhhhCCC---cEEEEcchH-HHHHhhhhhhcc---CCCEEEeCCCchHHHHHHHHhcCCeEEEecC---
Q 013461 153 IDVHLDCEARIAKFLGTP---DSILYSYGL-STMFSAIPCFCK---KGDLIVADEGVHWGIQNGLYLSRSTVVYFKH--- 222 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e---~~i~~~sG~-~a~~~ai~a~~~---~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~--- 222 (442)
..+..++++.+++++|.+ .++++++|+ .++..++.++.. +||.|+++...|.++.+++.+.|++++.++.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 466789999999999987 689999999 677777766542 5899999999999999999999999988872
Q ss_pred -----CCHHHHHHHHHhhcccccc-------------------------cccccccccCCCcc--ccc-----cCCCCCc
Q 013461 223 -----NDMDSLRNTLERVTADNKR-------------------------SNSFGVLGRSGRGL--TEH-----CGVPVDK 265 (442)
Q Consensus 223 -----~d~~~Le~~l~~~~~~~~~-------------------------a~~~g~~G~~g~g~--~~~-----~~v~~~~ 265 (442)
.|+++|++.+++.+.+... .|++.++-+...|. ... .+.....
T Consensus 184 ~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Gr 263 (444)
T TIGR03531 184 GDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGR 263 (444)
T ss_pred CcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccC
Confidence 1788999998754311111 22222221111111 111 1111113
Q ss_pred eeEEEEeccccccCC--CcEEEc-CHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHH
Q 013461 266 IDIVTAAMGHALATE--GGFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-EENPDLITKLKKNTAILRT 341 (442)
Q Consensus 266 ~diii~S~sK~lg~~--GG~v~g-~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~ 341 (442)
+|+++.|++|.+.++ ||+++. ++++++.++... .......|.. .+..+++..- +...+++++..++.+++.+
T Consensus 264 ad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y---~g~~~~s~~~-~~~~~ll~~G~~g~~~li~~~~~~a~~l~~ 339 (444)
T TIGR03531 264 VDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSY---PGRASASPSL-DVLITLLSLGSKGYLELLKERKEMYKYLKE 339 (444)
T ss_pred CCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhc---cCCCCChHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999763 355545 788888776532 1122223332 2233333322 2235677888888899988
Q ss_pred hhccC---CCceeecCCCCCEE-EEEecCCCCCchhhHHHHHHHHHHHHHhCCEE---E-eeccC-------c---ccc-
Q 013461 342 GLSDI---HGLSIASNPESPIV-FLILEKSTGSMKNDLQLLEDIADWALKEDGVF---V-VTSKR-------S---MLD- 402 (442)
Q Consensus 342 ~L~~~---~g~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~---v-~~~~~-------~---~~~- 402 (442)
.|+++ .|.++...+..||- .+.+..-.+ .+ ...+... |-..+|- | .++.. + ...
T Consensus 340 ~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~---~~---~~~~g~~-l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~ 412 (444)
T TIGR03531 340 LLQKLAERHGERLLDTPENPISSAMTLSTLKG---KD---PTMLGSM-LYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHT 412 (444)
T ss_pred HHHHHHHhhCcEeecCCCCceeEEEecccccc---cC---HHHHHHH-HHhCCCCCceeecCCCceEECCEEeecccccc
Confidence 88765 25566544455542 222321110 11 2344443 3223441 1 22210 0 000
Q ss_pred cCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 403 KCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 403 ~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
...+-+.+-++...++|++|||.++++|+++
T Consensus 413 ~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 413 SNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred cCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 1111245777778889999999999999875
No 347
>PLN02590 probable tyrosine decarboxylase
Probab=99.21 E-value=2.7e-08 Score=101.86 Aligned_cols=278 Identities=10% Similarity=0.099 Sum_probs=166.8
Q ss_pred CcHHHHHHHHHHHhhhCCCc---------EEEEcchHHHHHhhhhhhcc-----------CCCEEEeCCCchHHHHHHHH
Q 013461 152 TIDVHLDCEARIAKFLGTPD---------SILYSYGLSTMFSAIPCFCK-----------KGDLIVADEGVHWGIQNGLY 211 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~---------~i~~~sG~~a~~~ai~a~~~-----------~gd~Vi~~~~~h~s~~~~~~ 211 (442)
...+..++-+.+++++|.++ .+++++|++||..++.+... +.-+|++.+..|.++.++++
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 44566666777888888553 58889999999887755322 12267788999999999999
Q ss_pred hcCC---eEEEecC-------CCHHHHHHHHHhhcccccc---------------------------ccccccc--ccCC
Q 013461 212 LSRS---TVVYFKH-------NDMDSLRNTLERVTADNKR---------------------------SNSFGVL--GRSG 252 (442)
Q Consensus 212 l~g~---~v~~~~~-------~d~~~Le~~l~~~~~~~~~---------------------------a~~~g~~--G~~g 252 (442)
+.|. .++.++. .|+++|++.+++....... .|++.+. +..|
T Consensus 248 ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~G 327 (539)
T PLN02590 248 IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYA 327 (539)
T ss_pred HcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchh
Confidence 8876 3555443 2788999988764322111 2222111 1111
Q ss_pred Ccc--c-c----ccCCCCCceeEEEEeccccccCC--CcEEEcCHH--hHH-------HHHhhC---------CceeccC
Q 013461 253 RGL--T-E----HCGVPVDKIDIVTAAMGHALATE--GGFCTGSAR--VVD-------HQRLSS---------SGYVFSA 305 (442)
Q Consensus 253 ~g~--~-~----~~~v~~~~~diii~S~sK~lg~~--GG~v~g~~~--~i~-------~l~~~~---------~~~~~s~ 305 (442)
... + + ..|+ +.+|=++...+|.+..+ .|+++.++. +.+ ++.... ..+....
T Consensus 328 G~al~~~~~r~~~~Gi--e~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l 405 (539)
T PLN02590 328 GNACICPEYRKFIDGI--ENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL 405 (539)
T ss_pred hhhhcChhhHHHhcCC--ccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC
Confidence 111 1 1 1233 34688888999999753 355554432 222 221110 0001111
Q ss_pred CCcHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 306 SLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 306 s~~p~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
+- .+-+.....+++.+- ...++.++..++.++|.+.|++.+++++..++..+++.+++..+....+.......++.+
T Consensus 406 sR-r~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~ 484 (539)
T PLN02590 406 SR-RFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLA 484 (539)
T ss_pred CC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 11 222333344555442 235677788889999999998888899988888888888875432211111334567777
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEec-CCCCHHHHHHHHHHHHHHHHHHh
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS-AAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~-~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
++.+...+++++..... ...||+++. ...|++||+.+++.|.+...++-
T Consensus 485 ~l~~~G~~~vs~t~~~g------~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 485 AVNSTGKIFISHTALSG------KFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred HHHhCCCEEEEeeEECC------EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 65555456666543211 124999885 45679999999999998876654
No 348
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.19 E-value=3.6e-09 Score=114.49 Aligned_cols=292 Identities=15% Similarity=0.095 Sum_probs=171.6
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCc--cCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhh
Q 013461 111 VVNFASANYLGLIGHEKLLESCTSALEKYGVGSCG--PRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAI 186 (442)
Q Consensus 111 ~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~--~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai 186 (442)
+.||.+.+|.+.-.++.|.+++.+...-|.. ++. +-...|..+...+++..+|+++|.+ ++-++.+++++...++
T Consensus 104 ~~~fiG~G~y~~~~P~~v~~~i~~~~~~~Ta-ytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~ 182 (993)
T PLN02414 104 FKSYIGMGYYNTHVPPVILRNILENPGWYTQ-YTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMA 182 (993)
T ss_pred cccccCCCCCCccCCHHHHHHHHhChHHHhh-cCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHH
Confidence 5666666666654455665877766554321 111 1223567778889999999999975 5777888887777666
Q ss_pred hhh-cc--CCCEEEeCCCchHHHHHHHH----hcCCeEEEecCCCHH---------------------HHHHHHHhhccc
Q 013461 187 PCF-CK--KGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMD---------------------SLRNTLERVTAD 238 (442)
Q Consensus 187 ~a~-~~--~gd~Vi~~~~~h~s~~~~~~----l~g~~v~~~~~~d~~---------------------~Le~~l~~~~~~ 238 (442)
.+. .+ ++|.|++++..|++....++ -.|.+++.++..+.+ +++++.+.
T Consensus 183 ~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~---- 258 (993)
T PLN02414 183 MCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFDYSSGDVCGVLVQYPATDGEVLDYAEFVKN---- 258 (993)
T ss_pred HHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhccccCceEEEEEecCCCCeEEcCHHHHHHH----
Confidence 554 23 45889999999999766553 346677766543211 11111111
Q ss_pred cccccccccc---ccCCCccccccCCCCCceeEEEEeccccccCCC------cEEEcCHHhHHHHHh--hC--------C
Q 013461 239 NKRSNSFGVL---GRSGRGLTEHCGVPVDKIDIVTAAMGHALATEG------GFCTGSARVVDHQRL--SS--------S 299 (442)
Q Consensus 239 ~~~a~~~g~~---G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~G------G~v~g~~~~i~~l~~--~~--------~ 299 (442)
+|.-|.+ +.+..++...-.+..-+.||++++..|..+..| ||++.++++.+.+.. .+ .
T Consensus 259 ---ah~~GaL~iVaad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~ 335 (993)
T PLN02414 259 ---AHANGVKVVMATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKP 335 (993)
T ss_pred ---HHHcCCEEEEEECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCc
Confidence 2322221 222222211111112357999999999874322 899999887664421 11 1
Q ss_pred cee-----------cc-CCCcHHHHHHHHHHHH--HH----hc-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEE
Q 013461 300 GYV-----------FS-ASLPPYLASAAITAID--VL----EE-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIV 360 (442)
Q Consensus 300 ~~~-----------~s-~s~~p~~aaaa~aal~--~l----~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~ 360 (442)
.+. +. ++.+.-...+..+++. ++ .. .+++.++..++..++.+.|.+. |+++..++....+
T Consensus 336 ~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~f~~v 414 (993)
T PLN02414 336 ALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPFFDTV 414 (993)
T ss_pred ccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCCcCeE
Confidence 110 11 1222211112222222 11 12 2456788899999999999875 8887654444455
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHH
Q 013461 361 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKR 432 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~ 432 (442)
.+.+.. ..++.++ |.++||.++.... +.+|+|++..+|++|||.++++|..
T Consensus 415 t~~~~~-----------~~~v~~~-L~~~gI~l~~~~~---------~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 415 KVKCSD-----------ADAIADA-AAKVGINLRVVDA---------NTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred EEecCC-----------HHHHHHH-HHHCCCeeEEecC---------CeEEEEeeccCCHHHHHHHHHHHcc
Confidence 555421 1357775 4556997765431 3499999999999999999999963
No 349
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.19 E-value=5.2e-11 Score=112.91 Aligned_cols=222 Identities=19% Similarity=0.249 Sum_probs=142.5
Q ss_pred EeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccC
Q 013461 113 NFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKK 192 (442)
Q Consensus 113 d~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~ 192 (442)
||.|-+ ++|++.+++.++. .| .. .||..+...+|++++++++|.|.++++.+|+.||..+++++++|
T Consensus 1 Df~SD~-----~~~~m~~a~~~a~--~g-----d~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~ 67 (290)
T PF01212_consen 1 DFRSDT-----PTPAMLEAMAAAN--VG-----DD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRP 67 (290)
T ss_dssp EES-SS-----S-HHEEHHHHHTT--SB------C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCCccC-----CCHHHHHHHHccc--cC-----Cc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhc
Confidence 565544 6899999984432 12 22 47889999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCchHHHH--HHH-HhcCCeEEEecCC-----CHHHHHHHHHhhcc---cccc--------------------
Q 013461 193 GDLIVADEGVHWGIQ--NGL-YLSRSTVVYFKHN-----DMDSLRNTLERVTA---DNKR-------------------- 241 (442)
Q Consensus 193 gd~Vi~~~~~h~s~~--~~~-~l~g~~v~~~~~~-----d~~~Le~~l~~~~~---~~~~-------------------- 241 (442)
++.|++....|.... .++ .++|.+++.++.. |+++|++.++.... ..+.
T Consensus 68 ~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el 147 (290)
T PF01212_consen 68 GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEEL 147 (290)
T ss_dssp TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHH
T ss_pred CCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHH
Confidence 999999999997654 233 5689998887642 68899999988543 1110
Q ss_pred --------cccccccccCCCcc---ccccCCC----CCceeEEEEeccccccC-CCcEEEcCHHhHHHHHhhC---Ccee
Q 013461 242 --------SNSFGVLGRSGRGL---TEHCGVP----VDKIDIVTAAMGHALAT-EGGFCTGSARVVDHQRLSS---SGYV 302 (442)
Q Consensus 242 --------a~~~g~~G~~g~g~---~~~~~v~----~~~~diii~S~sK~lg~-~GG~v~g~~~~i~~l~~~~---~~~~ 302 (442)
.|++-++-+ |.-+ ....+.. ...+|++..|++|.+|+ .|++++++++.++..+... .+..
T Consensus 148 ~ai~~~a~~~gl~lhmD-GARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg~~ 226 (290)
T PF01212_consen 148 RAISELAREHGLPLHMD-GARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGGGM 226 (290)
T ss_dssp HHHHHHHHHHT-EEEEE-ETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHhCceEEEEe-hhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhccCe
Confidence 222221110 1100 0011111 13469999999999986 5688999999776543221 1111
Q ss_pred ccCCCcHHHHH--H-HHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCceee
Q 013461 303 FSASLPPYLAS--A-AITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSIA 352 (442)
Q Consensus 303 ~s~s~~p~~aa--a-a~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 352 (442)
.... +.++ . ...++..++..-....+..++.+++.+.|..+ +..+.
T Consensus 227 ~~~G---~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~ 275 (290)
T PF01212_consen 227 RQAG---VLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLP 275 (290)
T ss_dssp HHTT---HHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEE
T ss_pred eecc---eeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 1111 2222 0 01234444444456777888899999999887 55444
No 350
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.19 E-value=2.7e-09 Score=115.86 Aligned_cols=279 Identities=16% Similarity=0.130 Sum_probs=158.5
Q ss_pred cccCcHHHHHHHHHHHhhhCCCcEEEEc-chHHHHHhhh---hhh-ccCCC----EEEeCCCchHHHHHHHHhcCCeEEE
Q 013461 149 FYGTIDVHLDCEARIAKFLGTPDSILYS-YGLSTMFSAI---PCF-CKKGD----LIVADEGVHWGIQNGLYLSRSTVVY 219 (442)
Q Consensus 149 ~~g~~~~~~~le~~lA~~~g~e~~i~~~-sG~~a~~~ai---~a~-~~~gd----~Vi~~~~~h~s~~~~~~l~g~~v~~ 219 (442)
..|..+...++++.+++++|.+.+-++. +|++++..++ +.+ .++|| +|++++..|++....+...|.+++.
T Consensus 537 ~qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~ 616 (954)
T PRK05367 537 AAGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV 616 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence 3467788899999999999998776665 4556554433 332 25565 6999999999998889999999998
Q ss_pred ecCC-----CHHHHHHHHHhhcccccc----------------------ccccccc----ccCCCccccccCCCCCceeE
Q 013461 220 FKHN-----DMDSLRNTLERVTADNKR----------------------SNSFGVL----GRSGRGLTEHCGVPVDKIDI 268 (442)
Q Consensus 220 ~~~~-----d~~~Le~~l~~~~~~~~~----------------------a~~~g~~----G~~g~g~~~~~~v~~~~~di 268 (442)
++.+ |+++|++.+++....... +|..|.+ |.++.+..........+.|+
T Consensus 617 v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi 696 (954)
T PRK05367 617 VACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADV 696 (954)
T ss_pred ECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCE
Confidence 8753 678888888653221111 2222211 21111111111000135799
Q ss_pred EEEeccccccCC------C-cEEEcCHHhHHHHHhhCC--cee---ccC-CCcHH-HHHHHHHHHHHHhc-C-hHHHH--
Q 013461 269 VTAAMGHALATE------G-GFCTGSARVVDHQRLSSS--GYV---FSA-SLPPY-LASAAITAIDVLEE-N-PDLIT-- 330 (442)
Q Consensus 269 ii~S~sK~lg~~------G-G~v~g~~~~i~~l~~~~~--~~~---~s~-s~~p~-~aaaa~aal~~l~~-~-~~~~~-- 330 (442)
++++.+|+|+.+ | |++..++.+...+..... ... .+. ...++ .+..+..+..++.. . +.+++
T Consensus 697 ~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a 776 (954)
T PRK05367 697 SHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQAT 776 (954)
T ss_pred EEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 999999998632 1 577777655544422110 000 010 11223 12222233444332 2 22333
Q ss_pred -HHHHHHHHHHHhhccCCCceeecCCCCCE---EEEEecC-CCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC
Q 013461 331 -KLKKNTAILRTGLSDIHGLSIASNPESPI---VFLILEK-STGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 405 (442)
Q Consensus 331 -~l~~~~~~l~~~L~~~~g~~~~~~~~~~i---~~~~~~~-~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~ 405 (442)
+...+..|+.+.|.+...+.+.++ ..++ +.+.+.. +.. ......++++++ .+.|+......++ +
T Consensus 777 ~~~~~~A~Yl~~~L~~~~~~~~~~~-~~~~~~e~i~~~~~~~~~----~g~~~~di~krL-~d~G~~~~t~~~p-v---- 845 (954)
T PRK05367 777 EVAILNANYIAKRLKDHYPVLYTGA-NGRVAHECILDLRPLKES----TGITVDDIAKRL-IDYGFHAPTMSFP-V---- 845 (954)
T ss_pred HHHHHHHHHHHHHHHhhcCccccCC-CCCcccceEEEeeccccc----CCCCHHHHHHHH-HHCCCeEeecCCc-c----
Confidence 333788999999976423333221 1111 1222211 100 001134688775 5569987653332 1
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 406 LPVGIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 406 ~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+..+||+++-..|++|||+++++++.+..++.+
T Consensus 846 -~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 846 -AGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred -CCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 355999999999999999999999988776543
No 351
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.14 E-value=4.5e-08 Score=100.30 Aligned_cols=256 Identities=13% Similarity=0.132 Sum_probs=147.5
Q ss_pred EEEEcchHHHHHhhhhhhcc--------------------------CCCEEEeCCCchHHHHHHHHhcCC---eEEEecC
Q 013461 172 SILYSYGLSTMFSAIPCFCK--------------------------KGDLIVADEGVHWGIQNGLYLSRS---TVVYFKH 222 (442)
Q Consensus 172 ~i~~~sG~~a~~~ai~a~~~--------------------------~gd~Vi~~~~~h~s~~~~~~l~g~---~v~~~~~ 222 (442)
.+++++|++||..++.+... ++++|++++..|.++.+++...|. +++.++.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 57888999999887743211 245799999999999999988776 5666664
Q ss_pred C-----CHHHHHHHHHhhcccccc---------------------------ccccccc--ccCCCcc--cccc--CCC-C
Q 013461 223 N-----DMDSLRNTLERVTADNKR---------------------------SNSFGVL--GRSGRGL--TEHC--GVP-V 263 (442)
Q Consensus 223 ~-----d~~~Le~~l~~~~~~~~~---------------------------a~~~g~~--G~~g~g~--~~~~--~v~-~ 263 (442)
+ |+++|++.+++......+ .+++-+. +..|.+. ...+ -+. .
T Consensus 242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl 321 (522)
T TIGR03799 242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI 321 (522)
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc
Confidence 3 789999988753221111 1111111 1111111 1100 011 1
Q ss_pred CceeEEEEecccccc-CCC-cEEEc-CHHhHHHHHhhC-----------CceeccCCCcHHHHHHHHHHHHHHhc--ChH
Q 013461 264 DKIDIVTAAMGHALA-TEG-GFCTG-SARVVDHQRLSS-----------SGYVFSASLPPYLASAAITAIDVLEE--NPD 327 (442)
Q Consensus 264 ~~~diii~S~sK~lg-~~G-G~v~g-~~~~i~~l~~~~-----------~~~~~s~s~~p~~aaaa~aal~~l~~--~~~ 327 (442)
..+|.++.+.+|.++ ..| |+++. +++..+.+.... ..+.+..+-+.. +.....+++.+.. ...
T Consensus 322 e~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ 400 (522)
T TIGR03799 322 ERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYEL 400 (522)
T ss_pred hhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHH
Confidence 357999999999764 434 66554 455555443310 012233333333 2235567776643 356
Q ss_pred HHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCc--------------hhhHHHHHHHHHHHHHhCCEEE
Q 013461 328 LITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSM--------------KNDLQLLEDIADWALKEDGVFV 393 (442)
Q Consensus 328 ~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~--------------~~~~~~~~~i~~~~L~~~GV~v 393 (442)
+.++..++.++|.+.|++.+++++..++..+++.+.+.+..... ........++.+++.++..+++
T Consensus 401 ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~v 480 (522)
T TIGR03799 401 LIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFV 480 (522)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 78888999999999999888999988777888888864321100 0012234456665444444555
Q ss_pred eeccCc-ccccCCCCCceEEEe-cCCCCHHHHHHHHH
Q 013461 394 VTSKRS-MLDKCRLPVGIRLFV-SAAHSEADLVKACE 428 (442)
Q Consensus 394 ~~~~~~-~~~~~~~~~~iRi~~-~~~~t~eei~~~i~ 428 (442)
++..-. ..-++.....+|+++ +...|+++|+.+++
T Consensus 481 s~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~ 517 (522)
T TIGR03799 481 SRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILD 517 (522)
T ss_pred EEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHH
Confidence 543321 100011012399988 45577888887665
No 352
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.11 E-value=2.3e-08 Score=94.17 Aligned_cols=130 Identities=20% Similarity=0.173 Sum_probs=95.4
Q ss_pred cHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHH----HHHhcCCeEEEecCCCHHHH
Q 013461 153 IDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQN----GLYLSRSTVVYFKHNDMDSL 228 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~----~~~l~g~~v~~~~~~d~~~L 228 (442)
.+-...||++||.+-|.-.++.++||..|+..+|..++++||.|+....-|+.+.. .++..|.++.+++.+|++.+
T Consensus 61 NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~ 140 (426)
T COG2873 61 NPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENF 140 (426)
T ss_pred CchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHH
Confidence 35567899999999998899999999999999999999999999988777766554 34667899999999999999
Q ss_pred HHHHHhhcccccc-------------------cccccc--cccCCC---ccccccCCCCCceeEEEEeccccccC----C
Q 013461 229 RNTLERVTADNKR-------------------SNSFGV--LGRSGR---GLTEHCGVPVDKIDIVTAAMGHALAT----E 280 (442)
Q Consensus 229 e~~l~~~~~~~~~-------------------a~~~g~--~G~~g~---g~~~~~~v~~~~~diii~S~sK~lg~----~ 280 (442)
++.+++.++..-. +|.-|+ +-+.-. -++..+ ....||++.|++|.+|. .
T Consensus 141 ~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~---~hGADIVvHS~TK~igGhGt~i 217 (426)
T COG2873 141 EAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPI---EHGADIVVHSATKYIGGHGTAI 217 (426)
T ss_pred HHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecchh---hcCCCEEEEeecccccCCcccc
Confidence 9999887653211 343332 222111 111111 13579999999999974 3
Q ss_pred CcEEE
Q 013461 281 GGFCT 285 (442)
Q Consensus 281 GG~v~ 285 (442)
||.++
T Consensus 218 GG~iV 222 (426)
T COG2873 218 GGVIV 222 (426)
T ss_pred ceEEE
Confidence 56654
No 353
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=1.5e-08 Score=94.77 Aligned_cols=305 Identities=19% Similarity=0.203 Sum_probs=177.9
Q ss_pred eEEEe-ecCCCCCCCCChHHHHHHHHHHHh-cCCCCCccCccccCcHHHHHHHHHH----HhhhCCCc-----EEEEcch
Q 013461 110 EVVNF-ASANYLGLIGHEKLLESCTSALEK-YGVGSCGPRGFYGTIDVHLDCEARI----AKFLGTPD-----SILYSYG 178 (442)
Q Consensus 110 ~~id~-~s~~~l~~~~~p~v~ea~~~~l~~-~g~~~~~~~~~~g~~~~~~~le~~l----A~~~g~e~-----~i~~~sG 178 (442)
+-|++ +|-|| .+..|.||+-..+.+ |..|+.|-| .||..+...++|... -+.++.+. .+---||
T Consensus 41 ~gieLIaSENF----ts~aVmeAlGS~ltNKYSEGyPG~R-YYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SG 115 (477)
T KOG2467|consen 41 RGIELIASENF----TSRAVMEALGSCLTNKYSEGYPGAR-YYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSG 115 (477)
T ss_pred cceeEeecccc----hHHHHHHHHhHHhhcccccCCCccc-ccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCC
Confidence 34555 78888 457899999988875 888888877 567666666655333 34567542 2445689
Q ss_pred HHHHHhhhhhhccCCCEEEeCCCchH-HHHHHHHh-----cCCeEE----EecC------CCHHHHHHHHHhhcccccc-
Q 013461 179 LSTMFSAIPCFCKKGDLIVADEGVHW-GIQNGLYL-----SRSTVV----YFKH------NDMDSLRNTLERVTADNKR- 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd~Vi~~~~~h~-s~~~~~~l-----~g~~v~----~~~~------~d~~~Le~~l~~~~~~~~~- 241 (442)
+-||..+-.++++|+|.|.--+.-|+ .+..|... |...++ +|+. .|.|.||+......++...
T Consensus 116 SPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iia 195 (477)
T KOG2467|consen 116 SPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIA 195 (477)
T ss_pred CchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEe
Confidence 99999999999999998864222221 12223322 222221 1221 2788888776665554322
Q ss_pred -----------------------------cccccccccCCCccccccCCCCCceeEEEEeccccc-cCCCcEEEcCHHh-
Q 013461 242 -----------------------------SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGHAL-ATEGGFCTGSARV- 290 (442)
Q Consensus 242 -----------------------------a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK~l-g~~GG~v~g~~~~- 290 (442)
+|--|.+. .|.. .-+-+-.||++.|-+|+| |..||++.-++-+
T Consensus 196 G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVA---A~vi---psPFey~DiVTTTTHKsLRGPRg~mIFyRkGvk 269 (477)
T KOG2467|consen 196 GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVA---AGVI---PSPFEYCDIVTTTTHKSLRGPRGAMIFYRKGVK 269 (477)
T ss_pred ccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHh---cccC---CCcccccceeeccccccccCCcceeEEEeccCC
Confidence 22222221 1111 001134699999999999 7888887644321
Q ss_pred --------------HHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhccCCCceeec-
Q 013461 291 --------------VDHQRLSSSGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIAS- 353 (442)
Q Consensus 291 --------------i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~- 353 (442)
-+.+.....+...++ +..-..++...||+... +..+..+++.+|.+.|.+.|.+. |+++..
T Consensus 270 ~~~~k~g~~i~ydlE~kINfaVFP~lQGG-PHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtg 347 (477)
T KOG2467|consen 270 SIKPKQGKEILYDLEDKINFAVFPGLQGG-PHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTG 347 (477)
T ss_pred cCCCCCCCcceechhhhhhhhccccccCC-CCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecC
Confidence 111211111211122 22222333333555433 34567888999999999999886 988764
Q ss_pred CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCC----CCHHHHHHHHHH
Q 013461 354 NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAA----HSEADLVKACES 429 (442)
Q Consensus 354 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~----~t~eei~~~i~~ 429 (442)
..+.+++.+.+.+. + .+.. -+++.|+..+|.+.....|.....-.|.+|||.-++- ..++|.+++++-
T Consensus 348 GTDnHlvLvDLr~~-G---~dGa----rvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~f 419 (477)
T KOG2467|consen 348 GTDNHLVLVDLRPK-G---VDGA----RVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADF 419 (477)
T ss_pred CccceEEEEecccc-C---CchH----HHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHH
Confidence 34667777777532 2 2322 2334444446665544333322223477899977664 348999999998
Q ss_pred HHHHHH
Q 013461 430 LKRISA 435 (442)
Q Consensus 430 l~~~~~ 435 (442)
|.++++
T Consensus 420 i~~av~ 425 (477)
T KOG2467|consen 420 IDRAVK 425 (477)
T ss_pred HHHHHH
Confidence 888765
No 354
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.09 E-value=1.9e-08 Score=107.63 Aligned_cols=278 Identities=14% Similarity=0.125 Sum_probs=159.8
Q ss_pred cccCcHHHHHHHHHHHhhhCCCcEEEE-cchHHHHHhh---hhhhc-----cCCCEEEeCCCchHHHHHHHHhcCCeEEE
Q 013461 149 FYGTIDVHLDCEARIAKFLGTPDSILY-SYGLSTMFSA---IPCFC-----KKGDLIVADEGVHWGIQNGLYLSRSTVVY 219 (442)
Q Consensus 149 ~~g~~~~~~~le~~lA~~~g~e~~i~~-~sG~~a~~~a---i~a~~-----~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~ 219 (442)
..|+.+...++++.|++++|.+.+=++ ++|+.+...+ ++.+. .+.++|+++...|++....++..|.+++.
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~ 604 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVP 604 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEE
Confidence 456778899999999999999865444 5566655543 34321 23468999999998777778888999988
Q ss_pred ecCC-----CHHHHHHHHHhhcccccc-----ccccccccc-----------C-------CCccccccCCC---CCceeE
Q 013461 220 FKHN-----DMDSLRNTLERVTADNKR-----SNSFGVLGR-----------S-------GRGLTEHCGVP---VDKIDI 268 (442)
Q Consensus 220 ~~~~-----d~~~Le~~l~~~~~~~~~-----a~~~g~~G~-----------~-------g~g~~~~~~v~---~~~~di 268 (442)
++.+ |+++|++.+++...+.+. ..-+|++.+ . |.-...+.++. ..++|+
T Consensus 605 V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi 684 (939)
T TIGR00461 605 VNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADV 684 (939)
T ss_pred eccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCE
Confidence 8753 789999998753222211 001222211 0 11000011111 235899
Q ss_pred EEEeccccccC------CC-cEEEcCHHhHHHHHhhCC---------c----eeccC-CCcHHHHHHHHHHHHHHhc--C
Q 013461 269 VTAAMGHALAT------EG-GFCTGSARVVDHQRLSSS---------G----YVFSA-SLPPYLASAAITAIDVLEE--N 325 (442)
Q Consensus 269 ii~S~sK~lg~------~G-G~v~g~~~~i~~l~~~~~---------~----~~~s~-s~~p~~aaaa~aal~~l~~--~ 325 (442)
+++|.+|+|+. +| |++++++++...+-.... . -+.+. ..+...+-.+...+..+-. .
T Consensus 685 ~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL 764 (939)
T TIGR00461 685 CHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGL 764 (939)
T ss_pred EEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHH
Confidence 99999998862 12 788888766554421100 0 00010 1122222233334444321 2
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCceeecC-CCCCEEEE---EecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccc
Q 013461 326 PDLITKLKKNTAILRTGLSDIHGLSIASN-PESPIVFL---ILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSML 401 (442)
Q Consensus 326 ~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~~~i~~~---~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~ 401 (442)
.+..+....+..|+.+.|.+ ++++..+ +.+++++- .+.... +.......++++++++ .|+......+| +
T Consensus 765 ~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~---~~~g~~~~dIakrL~d-~G~hapt~~~p-v 837 (939)
T TIGR00461 765 PKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK---AKTGIEAIDVAKRLQD-YGFHAPTLSFP-V 837 (939)
T ss_pred HHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh---hhcCCCHHHHHHHHHh-CCeeccccCCc-c
Confidence 23445566688899999976 4444332 12343332 221100 0001124578887654 59975443222 1
Q ss_pred ccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 402 DKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 402 ~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+..+-|.++-..|++|||++++++.++.+++.
T Consensus 838 -----~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 838 -----PGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred -----CCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 34578888888999999999999988876654
No 355
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.07 E-value=1.7e-08 Score=101.28 Aligned_cols=200 Identities=19% Similarity=0.261 Sum_probs=118.0
Q ss_pred HHHHHHHHHHhhhCCCcEEEEcchH-HHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC-----------
Q 013461 155 VHLDCEARIAKFLGTPDSILYSYGL-STMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH----------- 222 (442)
Q Consensus 155 ~~~~le~~lA~~~g~e~~i~~~sG~-~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~----------- 222 (442)
...+.++..|+.+|.++..|..+|+ .+|..++.+.+++||.|++|+.+|-|+..|+.++|++++++.-
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~gg 150 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGG 150 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCC
Confidence 4579999999999999998887776 7899999999999999999999999999999999999887642
Q ss_pred CCHHHHHHHHHhhcccccc---------------------cccccc--cccCCCccc----cccCCC--CCceeEEEEec
Q 013461 223 NDMDSLRNTLERVTADNKR---------------------SNSFGV--LGRSGRGLT----EHCGVP--VDKIDIVTAAM 273 (442)
Q Consensus 223 ~d~~~Le~~l~~~~~~~~~---------------------a~~~g~--~G~~g~g~~----~~~~v~--~~~~diii~S~ 273 (442)
-+.+.+++.+.+.....+. .|..+. .-+...|.. ...... ....|+++.|.
T Consensus 151 I~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~ 230 (557)
T COG1982 151 IPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQST 230 (557)
T ss_pred CCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEech
Confidence 1456777666554433111 111111 001111111 111110 13579999999
Q ss_pred cccccC--CCcEEEcCH-HhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc--ChHH----HHHHHHHHHHHHHhhc
Q 013461 274 GHALAT--EGGFCTGSA-RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE--NPDL----ITKLKKNTAILRTGLS 344 (442)
Q Consensus 274 sK~lg~--~GG~v~g~~-~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~--~~~~----~~~l~~~~~~l~~~L~ 344 (442)
+|.+++ .+.++..+. ..+++=+....-.+++++.|.+...|.+.+-+++.. ...+ .+..-+.++.+++..+
T Consensus 231 HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~ 310 (557)
T COG1982 231 HKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLIN 310 (557)
T ss_pred hhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999973 234443332 111111111001123333344443334433333322 2233 4555666677777777
Q ss_pred cCCCceeecC
Q 013461 345 DIHGLSIASN 354 (442)
Q Consensus 345 ~~~g~~~~~~ 354 (442)
+++++++..+
T Consensus 311 ~~~~~~~~~~ 320 (557)
T COG1982 311 EIGFFPVLQP 320 (557)
T ss_pred hcCCeeeccc
Confidence 7766766544
No 356
>PLN02263 serine decarboxylase
Probab=99.03 E-value=3e-07 Score=92.06 Aligned_cols=255 Identities=12% Similarity=0.046 Sum_probs=160.9
Q ss_pred CcHHHHHHHHHHHhhhCCCc----EEEEcchHHHHHhhhhhhcc--CCCEEEeCCCchHHHHHHHHhcCCeEEEecCC--
Q 013461 152 TIDVHLDCEARIAKFLGTPD----SILYSYGLSTMFSAIPCFCK--KGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-- 223 (442)
Q Consensus 152 ~~~~~~~le~~lA~~~g~e~----~i~~~sG~~a~~~ai~a~~~--~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-- 223 (442)
+.+...++-+.+++++|.+. .+++++|+++|..++.+..+ +..++++++..|.++.+++++.|.+++.++.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~ 210 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVS 210 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCC
Confidence 55666677778888888532 58899999999998876643 34589999999999999999999988887743
Q ss_pred ---CHHHHHHHHHhhcccccc------------------------cccc-----ccc--ccCCCcccc---c---cCCCC
Q 013461 224 ---DMDSLRNTLERVTADNKR------------------------SNSF-----GVL--GRSGRGLTE---H---CGVPV 263 (442)
Q Consensus 224 ---d~~~Le~~l~~~~~~~~~------------------------a~~~-----g~~--G~~g~g~~~---~---~~v~~ 263 (442)
|+++|++.+++....... .|++ .+. |.-|..+.. + ++..
T Consensus 211 g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~- 289 (470)
T PLN02263 211 GEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFK- 289 (470)
T ss_pred CcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCC-
Confidence 788999888764321100 2332 111 111111110 1 1111
Q ss_pred CceeEEEEeccccccCC--CcEEEcCHHhHHHHHhhCCcee------ccCCCcHHHHHHHHHHHHHHh--cChHHHHHHH
Q 013461 264 DKIDIVTAAMGHALATE--GGFCTGSARVVDHQRLSSSGYV------FSASLPPYLASAAITAIDVLE--ENPDLITKLK 333 (442)
Q Consensus 264 ~~~diii~S~sK~lg~~--GG~v~g~~~~i~~l~~~~~~~~------~s~s~~p~~aaaa~aal~~l~--~~~~~~~~l~ 333 (442)
..+|=++.+.+|.++.+ .|+++.++..++.+... ..|. ...+=+...+.....+|+.+- ...+..++..
T Consensus 290 ~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~-~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~ 368 (470)
T PLN02263 290 KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCL 368 (470)
T ss_pred cCccEEEECCccccCCCcCEEEEEEehhhHhhhccC-hHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 22788899999999854 36666665544433211 1121 122222222333445565543 2345677788
Q ss_pred HHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEE
Q 013461 334 KNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 413 (442)
Q Consensus 334 ~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~ 413 (442)
++++++.+.|++. |+.....+.+.++.+..+. + .... +|..+... +..++++
T Consensus 369 ~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~-------~---------~~~~-~gW~L~~~----------~~~~Hiv 420 (470)
T PLN02263 369 RNAHYLKDRLREA-GISAMLNELSSTVVFERPK-------D---------EEFV-RRWQLACQ----------GNIAHVV 420 (470)
T ss_pred HHHHHHHHHHHhC-CCeEEeCCCceEEEEecCc-------h---------HHhh-cceEEccC----------CCcEEEE
Confidence 8899999999987 8777666777777665311 1 1122 36655542 1238999
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHH
Q 013461 414 VSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 414 ~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
+...+|++.+|++++-|++..+.
T Consensus 421 vmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 421 VMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred EcCCCCHHHHHHHHHHHHHHHhh
Confidence 99888999999999999887654
No 357
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.01 E-value=3.8e-07 Score=89.71 Aligned_cols=269 Identities=17% Similarity=0.156 Sum_probs=158.2
Q ss_pred cHHHHHHHHHHHhhhCCC--c-E-EEEcchHHHHHhhhhhhc-cCCCEEEeCCCchHHH-H-HHHHhcCC-eEEEe--cC
Q 013461 153 IDVHLDCEARIAKFLGTP--D-S-ILYSYGLSTMFSAIPCFC-KKGDLIVADEGVHWGI-Q-NGLYLSRS-TVVYF--KH 222 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e--~-~-i~~~sG~~a~~~ai~a~~-~~gd~Vi~~~~~h~s~-~-~~~~l~g~-~v~~~--~~ 222 (442)
.++..+.++.|.++++.+ . + ++.+||+.++++++..++ ++||.|++.. .++.- . +.++..|. ++..+ +.
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~ 116 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEY 116 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCC
Confidence 477788899999999963 2 3 446788999999998888 5888777654 44433 3 45566666 34443 33
Q ss_pred C---CHHHHHHHHHhhcccccc---ccccccc------ccC--CC-----cccc--ccCCCCCceeEEEEeccccccCCC
Q 013461 223 N---DMDSLRNTLERVTADNKR---SNSFGVL------GRS--GR-----GLTE--HCGVPVDKIDIVTAAMGHALATEG 281 (442)
Q Consensus 223 ~---d~~~Le~~l~~~~~~~~~---a~~~g~~------G~~--g~-----g~~~--~~~v~~~~~diii~S~sK~lg~~G 281 (442)
. |+++++. + +.... ..+.|+. ++. +. +.+. -..++.+++|+++.|--|+|++++
T Consensus 117 g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~~~~~lliVDavSs~g~~~l~~d~iDv~~tgsQK~L~~pp 191 (374)
T TIGR01365 117 GKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPADREGLTICDATSAAFAQDLDYHKLDVVTFSWQKVLGGEG 191 (374)
T ss_pred CCCCCHHHcCC--C---CCEEEecCCCchheeccccccccccCCCcEEEEccchhcCCCCChhHCcEEEEechhccCCCC
Confidence 2 4555542 1 11001 1222221 100 00 0000 012334569999999999998765
Q ss_pred --cEEEcCHHhHHHHHhhCC-----c--------------eeccC-CCcH-HHHHHHHHHHHHHhc---ChHHHHHHHHH
Q 013461 282 --GFCTGSARVVDHQRLSSS-----G--------------YVFSA-SLPP-YLASAAITAIDVLEE---NPDLITKLKKN 335 (442)
Q Consensus 282 --G~v~g~~~~i~~l~~~~~-----~--------------~~~s~-s~~p-~~aaaa~aal~~l~~---~~~~~~~l~~~ 335 (442)
++++.+++.++....... . +...+ ..|| ....++..+++.+++ .+.+.++.+++
T Consensus 192 Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~ 271 (374)
T TIGR01365 192 AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDN 271 (374)
T ss_pred ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 568888888766542110 0 00111 1223 334445566765543 35688899999
Q ss_pred HHHHHHhhccCCC-ceeecC---CCCCEEE-EEecCCCCC--c-hhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCC
Q 013461 336 TAILRTGLSDIHG-LSIASN---PESPIVF-LILEKSTGS--M-KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLP 407 (442)
Q Consensus 336 ~~~l~~~L~~~~g-~~~~~~---~~~~i~~-~~~~~~~~~--~-~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~ 407 (442)
.+.+++.++++ | +.+... ..|+.+. +.+..+.-+ . .+......++.+ .|+++||.+.++..... +
T Consensus 272 a~~l~~~l~~l-g~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~gi~i~~G~~~~~-----~ 344 (374)
T TIGR01365 272 LAVLEAFVAKN-NWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELIS-TLEKEGVAYDIGSYRDA-----P 344 (374)
T ss_pred HHHHHHHHHHC-CCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHH-HHHHCCEEEeccccccC-----C
Confidence 99999999997 6 665532 2466333 334221000 0 001111245665 46667999987765432 2
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHHHH
Q 013461 408 VGIRLFVSAAHSEADLVKACESLKRIS 434 (442)
Q Consensus 408 ~~iRi~~~~~~t~eei~~~i~~l~~~~ 434 (442)
..+||.....++.+||+.+++.|+=+.
T Consensus 345 ~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 345 SGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred CceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 459999999999999999999987543
No 358
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.98 E-value=6.7e-08 Score=93.39 Aligned_cols=164 Identities=17% Similarity=0.165 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHH----hcCCeEEEecCCCHHHHH
Q 013461 154 DVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLR 229 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~----l~g~~v~~~~~~d~~~Le 229 (442)
+....+|+.++++.|.+.+++|+||..|+..++..+++.||.|++....|..+..-++ ..|.....++..|.++++
T Consensus 77 Pt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~ 156 (409)
T KOG0053|consen 77 PTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKIL 156 (409)
T ss_pred CchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHH
Confidence 3457899999999999999999999999999999999999998888787777665443 456666666555555555
Q ss_pred HHHHhhccc-------ccc------------ccccccc---ccCCCccccccCCC--CCceeEEEEeccccccC----CC
Q 013461 230 NTLERVTAD-------NKR------------SNSFGVL---GRSGRGLTEHCGVP--VDKIDIVTAAMGHALAT----EG 281 (442)
Q Consensus 230 ~~l~~~~~~-------~~~------------a~~~g~~---G~~g~g~~~~~~v~--~~~~diii~S~sK~lg~----~G 281 (442)
+.+++.+.. ++. +|..|++ ..|-.+. ++++ +-..||++.|.+|.+|. .|
T Consensus 157 ~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p---~~~~pL~lGADIV~hSaTKyi~Ghsdvi~ 233 (409)
T KOG0053|consen 157 KAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP---YNQDPLPLGADIVVHSATKYIGGHSDVIG 233 (409)
T ss_pred HhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc---cccChhhcCCCEEEEeeeeeecCCcceee
Confidence 555542111 010 5555543 3332222 2222 34579999999999973 35
Q ss_pred cEEEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH
Q 013461 282 GFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL 322 (442)
Q Consensus 282 G~v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l 322 (442)
|.++++ .+....++... -...+.++|+.+.-.+..++.+
T Consensus 234 G~iv~n~~~~~~~l~~~~--~~lg~~~~p~~~~ll~Rglktl 273 (409)
T KOG0053|consen 234 GSVVLNSEELASRLKFLQ--EDLGWCEDPFDLFLLSRGLKTL 273 (409)
T ss_pred eEEecCcHHHHHHHHHHH--HHhcCCCCHHHHHHHhcCcchh
Confidence 887775 77777665443 1234566888877665555444
No 359
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.91 E-value=2.7e-08 Score=92.63 Aligned_cols=310 Identities=15% Similarity=0.182 Sum_probs=174.0
Q ss_pred eecCCCCeEE-ECCeeEEEeec---CCCCCCCCChHHHHHHHH-HHHhcCCCCCccCccccCcHHHHHHHHHHHhhh--C
Q 013461 96 LESAAGPHTI-ISGKEVVNFAS---ANYLGLIGHEKLLESCTS-ALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL--G 168 (442)
Q Consensus 96 ~~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~v~ea~~~-~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~--g 168 (442)
.+..-|.|++ +||+.+||.-+ .-.+|+ +||.+++++++ +..+.-+.- ..-+.+-..+..+.+.+.+-+.- |
T Consensus 62 YEkS~GNYlvDvDGN~lLDvYsQIsSvplGY-n~P~LvK~a~~p~~~~~lvnR-PALg~fP~kd~~~~l~~~ll~~APKG 139 (484)
T KOG1405|consen 62 YEKSIGNYLVDVDGNRLLDVYSQISSVPLGY-NNPALVKAAQQPQNATMLVNR-PALGNFPPKDFAEKLRQSLLSIAPKG 139 (484)
T ss_pred hhhhcCceEEecCCCeeehhhhhhcccccCC-CCHHHHHHhcChHHHHHHhcc-ccccCCChhhHHHHHHHHHHhhCcch
Confidence 4567799999 69999999843 345666 47888777654 222210100 00011112344555555555444 3
Q ss_pred CCcEEEEcchHHHHHhhhhhhc------cCCC-----------------------EEEeCCCchHHHHHHHHhcCCeEE-
Q 013461 169 TPDSILYSYGLSTMFSAIPCFC------KKGD-----------------------LIVADEGVHWGIQNGLYLSRSTVV- 218 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a~~------~~gd-----------------------~Vi~~~~~h~s~~~~~~l~g~~v~- 218 (442)
...++..-+|+.||+.|+.+.. +||+ +.-+....|+-+...+....++++
T Consensus 140 ~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIH 219 (484)
T KOG1405|consen 140 QKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIH 219 (484)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCcccc
Confidence 4567777889999998885421 2331 223344556555544444444321
Q ss_pred -----------------Eec------CC------CHHHHHHHHHhhccccc-c---------------------------
Q 013461 219 -----------------YFK------HN------DMDSLRNTLERVTADNK-R--------------------------- 241 (442)
Q Consensus 219 -----------------~~~------~~------d~~~Le~~l~~~~~~~~-~--------------------------- 241 (442)
.|| +| .++++|+++.+...+.. .
T Consensus 220 KldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrd 299 (484)
T KOG1405|consen 220 KLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRD 299 (484)
T ss_pred ccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHH
Confidence 111 11 24577788877653321 1
Q ss_pred ---ccccccc--------ccCCCc-cccccCCCCCceeEEEEeccccccCCCcEEEcCHHhHHHHHhhCCceeccCC-Cc
Q 013461 242 ---SNSFGVL--------GRSGRG-LTEHCGVPVDKIDIVTAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSAS-LP 308 (442)
Q Consensus 242 ---a~~~g~~--------G~~g~g-~~~~~~v~~~~~diii~S~sK~lg~~GG~v~g~~~~i~~l~~~~~~~~~s~s-~~ 308 (442)
.|++-.+ |.+|.. ..||++++ +..|++ ||||-|-. |||....+ ++......+|.+- ..
T Consensus 300 i~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~-~PpD~v--TFSKK~q~-gGffh~~~-----frpn~pYrifNTWmGd 370 (484)
T KOG1405|consen 300 ITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD-SPPDVV--TFSKKFQT-GGFFHDEE-----FRPNEPYRIFNTWMGD 370 (484)
T ss_pred HHHhcCeEEEeeeeecCCCccCceeeehhcCCC-CCccce--ehhhhhhc-CccccCcc-----cCCCchHHHhhhhcCC
Confidence 2221111 334443 34788886 345666 49998853 56765543 2222212233332 23
Q ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccC----CCc-eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 309 PYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDI----HGL-SIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 309 p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~----~g~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
|.-+..+.+.++.+++ +.+.++....++.|..+|.++ |+. .-. ...+-++.+.++.. ..-.+++.
T Consensus 371 P~k~lll~~vv~~I~~-~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~-RGrGTF~a~d~ps~--------~~Rdk~i~ 440 (484)
T KOG1405|consen 371 PSKNLLLEEVVQEIKR-EDLLNNVAHVGKALLKGLLELQAKYPGKINNL-RGRGTFIAWDCPSG--------SIRDKLIL 440 (484)
T ss_pred hHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHhCchhhhcc-cccceEEEEeCCCh--------HHHHHHHH
Confidence 5444445566777766 458999999999999998765 221 111 12444555555332 11225565
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.++.+|+.+....- .+||+-++...++...+-+++++++.++.
T Consensus 441 -~~~~nGv~~GGCg~---------~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 441 -IARLNGVNLGGCGD---------KSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -HHHHcCceeccccc---------ceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 35667997754322 34999999999999999999999887653
No 360
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.89 E-value=1.5e-06 Score=84.74 Aligned_cols=290 Identities=15% Similarity=0.116 Sum_probs=168.1
Q ss_pred ChHHHHHHHHHHHhcCC-----CCCccCccccCcHHHHHHHHHHHhhhCCC---cEEEEcc-hHHHHHhhhhhhccCCC-
Q 013461 125 HEKLLESCTSALEKYGV-----GSCGPRGFYGTIDVHLDCEARIAKFLGTP---DSILYSY-GLSTMFSAIPCFCKKGD- 194 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~-----~~~~~~~~~g~~~~~~~le~~lA~~~g~e---~~i~~~s-G~~a~~~ai~a~~~~gd- 194 (442)
+++|.+++++.+.+|.. ..-++|.- --.+++.++++.+.++++.+ +++++++ |+.+.+++..-++++||
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~-~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~ 94 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSS-WFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAA 94 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccH-HHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCc
Confidence 57999999988877532 11223321 12467789999999999963 3555554 67888888888889999
Q ss_pred EE-EeCCCchHHHH-HHHHhcC-CeEEEe----cCCCHHHHHHHHHhhcccccc------cccccccc-----cCCC---
Q 013461 195 LI-VADEGVHWGIQ-NGLYLSR-STVVYF----KHNDMDSLRNTLERVTADNKR------SNSFGVLG-----RSGR--- 253 (442)
Q Consensus 195 ~V-i~~~~~h~s~~-~~~~l~g-~~v~~~----~~~d~~~Le~~l~~~~~~~~~------a~~~g~~G-----~~g~--- 253 (442)
++ .+..+.+..-+ +-++..| .++... +....-+.+++ +. .+.... ..+.|+.- ..+.
T Consensus 95 ~~~~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~-~~-~~d~~~v~~t~NETstGv~~~~~~~~~~~llv 172 (364)
T PRK12462 95 APEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAEL-DW-DARAPFRHYVSNETVEGLQFPDAAGLPDSPLI 172 (364)
T ss_pred EEEEEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHh-cc-CCCCcEEEEccCCCCceEecCcccccCCCeEE
Confidence 44 46666655432 2222223 222221 11111112221 11 111110 12222211 0000
Q ss_pred --ccccc--cCCCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCcee------------ccCCCcHHHHHHHH
Q 013461 254 --GLTEH--CGVPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGYV------------FSASLPPYLASAAI 316 (442)
Q Consensus 254 --g~~~~--~~v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~~~------------~s~s~~p~~aaaa~ 316 (442)
+.... ..++.++.|++..+.-|++|.+| ++++.+++.++.....- ++. +. ++|.....+..
T Consensus 173 vD~sS~~~s~pid~~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~-p~~ldy~~~~~~~s~~n-TPpv~~iy~l~ 250 (364)
T PRK12462 173 ADMSSDFMSRPFDVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDTL-PPMLDFRTHVEHRSNYN-TPPVFAIYVMA 250 (364)
T ss_pred EEcCchhhCCCCChHHccEEEeeccccCCCCceEEEEECHHHHhhccccC-CchhhHHHHHhcCCCCC-CchHHHHHHHH
Confidence 00000 12334567999999999999777 77888988877654321 111 12 23444555666
Q ss_pred HHHHHHhcC----hHHHHHHHHHHHHHHHhhccCCCceee---cCCCCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHh
Q 013461 317 TAIDVLEEN----PDLITKLKKNTAILRTGLSDIHGLSIA---SNPESPI-VFLILEKSTGSMKNDLQLLEDIADWALKE 388 (442)
Q Consensus 317 aal~~l~~~----~~~~~~l~~~~~~l~~~L~~~~g~~~~---~~~~~~i-~~~~~~~~~~~~~~~~~~~~~i~~~~L~~ 388 (442)
.+++++.++ +.+.++-+++.+.+++.+++.+|+... ....|.+ +.+.+. +..+..++.+. .++
T Consensus 251 ~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~--------~~~l~~~f~~~-a~~ 321 (364)
T PRK12462 251 LVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFR--------QPRLDTLFKEQ-STE 321 (364)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcC--------CHHHHHHHHHH-HHH
Confidence 788887532 467778888899999999887655322 1223332 333442 22334467765 556
Q ss_pred CCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 389 DGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 389 ~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
+|+.-..++.. -.++|+|+-..++.|+++.+++-++++-+
T Consensus 322 ~gl~~lkGhr~-------vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 322 AGFCGLSGHRS-------IGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred CCCccccCCcc-------cCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 68876555442 25699999999999999999999888754
No 361
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.83 E-value=1.5e-07 Score=102.43 Aligned_cols=254 Identities=12% Similarity=0.080 Sum_probs=151.0
Q ss_pred ccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhh-ccC--CCEEEeCCCchHHHHHHH----HhcCCeEE
Q 013461 148 GFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCF-CKK--GDLIVADEGVHWGIQNGL----YLSRSTVV 218 (442)
Q Consensus 148 ~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~-~~~--gd~Vi~~~~~h~s~~~~~----~l~g~~v~ 218 (442)
...|.-+...++++.+|+++|.+ ++-++.+++++.+.++.++ .++ +|.|++++..|++....+ +..|.+++
T Consensus 115 isQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~ 194 (954)
T PRK05367 115 ISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEE
Confidence 34577788889999999999977 4577777777766666554 233 489999999999977554 44677877
Q ss_pred EecCCC-HH-------------------HHHHHHHhhccccccccccccc---ccC--CCccccccCCCCCceeEEEEec
Q 013461 219 YFKHND-MD-------------------SLRNTLERVTADNKRSNSFGVL---GRS--GRGLTEHCGVPVDKIDIVTAAM 273 (442)
Q Consensus 219 ~~~~~d-~~-------------------~Le~~l~~~~~~~~~a~~~g~~---G~~--g~g~~~~~~v~~~~~diii~S~ 273 (442)
.++..+ .+ +++++.+. +|..|.+ +.. ..+... ....-+.||+++|.
T Consensus 195 ~~~~~~d~~~~~~~~vlvq~p~~~G~i~d~~~i~~~-------ah~~Gal~~vda~~~Al~~l~--~pge~GaDi~vgs~ 265 (954)
T PRK05367 195 VGDAAKALDHDDVFGVLLQYPGTSGEVRDYTALIAA-------AHARGALVAVAADLLALTLLT--PPGEMGADIAVGSA 265 (954)
T ss_pred EecCccCCCcccEEEEEEecCCCCeeeccHHHHHHH-------HHHcCCEEEEEehhhhccCCC--ChhhcCCCEEEeeC
Confidence 776532 11 11111111 3332221 100 000100 11113579999999
Q ss_pred ccc-----ccCCC-cEEEcCHHhHHHHHhh--C--------Ccee-----------ccCCC-c---HHHHHHHHHHH--H
Q 013461 274 GHA-----LATEG-GFCTGSARVVDHQRLS--S--------SGYV-----------FSASL-P---PYLASAAITAI--D 320 (442)
Q Consensus 274 sK~-----lg~~G-G~v~g~~~~i~~l~~~--~--------~~~~-----------~s~s~-~---p~~aaaa~aal--~ 320 (442)
.|. +|.+| ||++.++++.+.+... + ..|. +..+. + .....++.+++ .
T Consensus 266 qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~ 345 (954)
T PRK05367 266 QRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAV 345 (954)
T ss_pred cccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 997 55444 8999998877766311 0 1111 11111 1 11111122221 2
Q ss_pred HHh-c-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccC
Q 013461 321 VLE-E-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKR 398 (442)
Q Consensus 321 ~l~-~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~ 398 (442)
++. . .+++.++...+..++.+.|.+ .|+++..+.....+.+.++. ...++.+++ .++||.++...
T Consensus 346 ~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~~~~~~~~~----------~~~~i~~~l-~~~gi~~~~~~- 412 (954)
T PRK05367 346 YHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFDTLTVEVGG----------DAAAVLARA-LAAGINLRRVD- 412 (954)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCCeEEEeCCC----------CHHHHHHHH-HHCCceecccc-
Confidence 222 2 245677888899999999987 48877543223344443310 134677764 45699884321
Q ss_pred cccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 399 SMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 399 ~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
+..+|+|++..+|++||++++++|.
T Consensus 413 --------~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 413 --------DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred --------CCEEEEEecccCCHHHHHHHHHHHc
Confidence 2349999999999999999999996
No 362
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.80 E-value=2.5e-06 Score=78.64 Aligned_cols=268 Identities=15% Similarity=0.132 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHhhhCCC---cEEEEcchHHHHHhhhhhhccCCCEEEeC-CCchHH-HHHHHHhcCCeEEEecCC-----
Q 013461 154 DVHLDCEARIAKFLGTP---DSILYSYGLSTMFSAIPCFCKKGDLIVAD-EGVHWG-IQNGLYLSRSTVVYFKHN----- 223 (442)
Q Consensus 154 ~~~~~le~~lA~~~g~e---~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~-~~~h~s-~~~~~~l~g~~v~~~~~~----- 223 (442)
....++.+-+...|.+. --++-++|..+.++++.-+..|||.|++- .+.++. ..+..+-.|+++..++..
T Consensus 50 qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~ 129 (385)
T KOG2862|consen 50 QIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAV 129 (385)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCc
Confidence 34455666666666543 23555678899999998889999986654 333332 345567778888877532
Q ss_pred CHHHHHHHHHhhcccccc----ccccccc-------------------ccCC--CccccccCCCCCceeEEEEecccccc
Q 013461 224 DMDSLRNTLERVTADNKR----SNSFGVL-------------------GRSG--RGLTEHCGVPVDKIDIVTAAMGHALA 278 (442)
Q Consensus 224 d~~~Le~~l~~~~~~~~~----a~~~g~~-------------------G~~g--~g~~~~~~v~~~~~diii~S~sK~lg 278 (442)
..+.+++.|.+++++... ..+.|++ -++- .|.. .|-++...+|+....--|++|
T Consensus 130 ~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt-~F~mDewgVDvaytgSQKaL~ 208 (385)
T KOG2862|consen 130 PLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGT-EFEMDEWGVDVAYTGSQKALG 208 (385)
T ss_pred cHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCc-cceehhhcccEEEecchhhcC
Confidence 578888888887654221 1122222 1111 1111 233444567887766689998
Q ss_pred CC-C-cEEEcCHHhHHHHHhhCC---cee------------------ccCCCcHHHHHHHHHHHHHHhc--ChHHHHHHH
Q 013461 279 TE-G-GFCTGSARVVDHQRLSSS---GYV------------------FSASLPPYLASAAITAIDVLEE--NPDLITKLK 333 (442)
Q Consensus 279 ~~-G-G~v~g~~~~i~~l~~~~~---~~~------------------~s~s~~p~~aaaa~aal~~l~~--~~~~~~~l~ 333 (442)
.+ | +.+..++...+.++.+.. .+. +-.+.|-.......+||+.+.+ .++..++-+
T Consensus 209 aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~ 288 (385)
T KOG2862|consen 209 APAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHR 288 (385)
T ss_pred CCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 64 4 567788888888876542 111 1122333445555678876654 256788889
Q ss_pred HHHHHHHHhhccCCCceeecCC---CCCEEE-EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCc
Q 013461 334 KNTAILRTGLSDIHGLSIASNP---ESPIVF-LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVG 409 (442)
Q Consensus 334 ~~~~~l~~~L~~~~g~~~~~~~---~~~i~~-~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~ 409 (442)
++.++++..|.++ |++..... ..|-+. +.+ +.+ .+..+++..++.+.++-+..+..+.++ ..
T Consensus 289 e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~v--p~g------vDw~dVv~~~~~~~~vei~gglg~~~g-----Kv 354 (385)
T KOG2862|consen 289 EMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKV--PYG------VDWKDVVAYAMSHYVVEIGGGLGPTVG-----KV 354 (385)
T ss_pred HHHHHHHHHHHHh-CccceecChhhccCcceeeec--CCC------CCHHHHHHHHHHhcCEEeccccCCCcc-----cE
Confidence 9999999999987 77654322 233332 222 111 123467888888777877776655542 34
Q ss_pred eEEEecC-CCCHHHHHHHHHHHHHHHHH
Q 013461 410 IRLFVSA-AHSEADLVKACESLKRISAV 436 (442)
Q Consensus 410 iRi~~~~-~~t~eei~~~i~~l~~~~~~ 436 (442)
+||.+.. .-+-+-|+..++.|+.++++
T Consensus 355 ~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 355 FRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred EEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 8986543 45678899999888887765
No 363
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.79 E-value=2.5e-06 Score=78.24 Aligned_cols=311 Identities=16% Similarity=0.191 Sum_probs=163.1
Q ss_pred EEEeecCCCCCCCCChHHHHHHHHHHHh------cCCCCCccCccccCcHHHHHHHHHHHhhhC---CCcEEEEcchHH-
Q 013461 111 VVNFASANYLGLIGHEKLLESCTSALEK------YGVGSCGPRGFYGTIDVHLDCEARIAKFLG---TPDSILYSYGLS- 180 (442)
Q Consensus 111 ~id~~s~~~l~~~~~p~v~ea~~~~l~~------~g~~~~~~~~~~g~~~~~~~le~~lA~~~g---~e~~i~~~sG~~- 180 (442)
.|+++++|+.-+ |++.+..++...+ ++..-|.+.+..|...+...|.+.+-+-+| .++.|..+.|++
T Consensus 32 ~imLggGNPa~i---Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 32 AIMLGGGNPARI---PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred ceeeCCCCcccC---hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 677777776544 6776666655443 333345555556777777778888888788 457788888874
Q ss_pred HHHhhhhhhcc---CCC--EEEe-CCCchHHHHHHHHh------cCCeEE-----Eec-CCCHHHHHHH-----------
Q 013461 181 TMFSAIPCFCK---KGD--LIVA-DEGVHWGIQNGLYL------SRSTVV-----YFK-HNDMDSLRNT----------- 231 (442)
Q Consensus 181 a~~~ai~a~~~---~gd--~Vi~-~~~~h~s~~~~~~l------~g~~v~-----~~~-~~d~~~Le~~----------- 231 (442)
+..-+...|.+ .|+ .|+. -.+.|-.+.++.-. .+.++. .|+ |-|.++|+-.
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~~g~ic~SRP 188 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIGESTGAICVSRP 188 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHHHcccccccceEEecCC
Confidence 44444444432 233 2333 23333332221100 001100 000 1232222110
Q ss_pred ---------------HHhhcccccccccccccccCCCcccc----ccCCC--CCceeEEEEeccccccCCC---cEEEcC
Q 013461 232 ---------------LERVTADNKRSNSFGVLGRSGRGLTE----HCGVP--VDKIDIVTAAMGHALATEG---GFCTGS 287 (442)
Q Consensus 232 ---------------l~~~~~~~~~a~~~g~~G~~g~g~~~----~~~v~--~~~~diii~S~sK~lg~~G---G~v~g~ 287 (442)
|.+... .|++-++-+...|... +-++. -.+.-|.+.|+||. |.+| |.++++
T Consensus 189 tNPTGNVlTdeE~~kldalA~----~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIan 263 (417)
T COG3977 189 TNPTGNVLTDEELAKLDALAR----QHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIAN 263 (417)
T ss_pred CCCCCCcccHHHHHHHHHHhh----hcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhc-CCCCcceeEEEcc
Confidence 011000 2333322111111110 00111 12346788999996 4444 999999
Q ss_pred HHhHHHHHhhCCc-eeccCCCcHHHHHHHHHHHHHHh--c---ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEE
Q 013461 288 ARVVDHQRLSSSG-YVFSASLPPYLASAAITAIDVLE--E---NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVF 361 (442)
Q Consensus 288 ~~~i~~l~~~~~~-~~~s~s~~p~~aaaa~aal~~l~--~---~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~ 361 (442)
++++..+.+...- ....+.+-|..++-.++.=+.++ + .+-.+++.+.-...++..|-+. .+.+..+.+.-+.|
T Consensus 264 e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~iHkpEGAIFlW 342 (417)
T COG3977 264 EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLIHKPEGAIFLW 342 (417)
T ss_pred HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ceeeecCCcceeeh
Confidence 9999988654211 11223344555544443322222 2 1344556666666666666553 45555443444557
Q ss_pred EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc-CCCCC---ceEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 013461 362 LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK-CRLPV---GIRLFVSAAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~-~~~~~---~iRi~~~~~~t~eei~~~i~~l~~~~~~~ 437 (442)
+++++-.- ..+++.++ |+..||++.|+.++-..- ..-|. .+|++... ++++|++.+.+|.+.+++.
T Consensus 343 LWf~dLPI-------tt~~LYq~-LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~--~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 343 LWFKDLPI-------TTEELYQR-LKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred hhhccCCC-------CHHHHHHH-HHhCeEEEecccccCCCCCCCCCCccceEEEecCC--CHHHHHHHHHHHHHHHHHH
Confidence 77643211 12356664 777899999998753211 11122 38988875 7899999999999988877
Q ss_pred hhc
Q 013461 438 LRD 440 (442)
Q Consensus 438 ~~~ 440 (442)
.++
T Consensus 413 yq~ 415 (417)
T COG3977 413 YQE 415 (417)
T ss_pred Hhc
Confidence 654
No 364
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=98.72 E-value=8.2e-08 Score=83.44 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhh--CCCcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHH-HHHHhcCCeEEEecCC
Q 013461 156 HLDCEARIAKFL--GTPDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQ-NGLYLSRSTVVYFKHN 223 (442)
Q Consensus 156 ~~~le~~lA~~~--g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~-~~~~l~g~~v~~~~~~ 223 (442)
+.++++.+++++ +.+.++++++|++|+..++.++.++++.|++.++.|++.. ..+...|++++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 368999999999 8889999999999999999999988999999999988877 7788889999888754
No 365
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.65 E-value=4e-06 Score=77.83 Aligned_cols=295 Identities=16% Similarity=0.134 Sum_probs=158.6
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCCccC--ccccCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHHHhhhhhhc--cCC
Q 013461 120 LGLIGHEKLLESCTSALEKYGVGSCGPR--GFYGTIDVHLDCEARIAKFLGT--PDSILYSYGLSTMFSAIPCFC--KKG 193 (442)
Q Consensus 120 l~~~~~p~v~ea~~~~l~~~g~~~~~~~--~~~g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~~~ai~a~~--~~g 193 (442)
||..++....+..+.+.++++.+.-.+- ....-.++-+.+-.++|.+.|. .+++++.+-+-.+..++.+.. .+|
T Consensus 40 LGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~ 119 (407)
T COG3844 40 LGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEG 119 (407)
T ss_pred cccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCC
Confidence 6765444445555555555554322221 1223345667888899999995 356666665555555555543 347
Q ss_pred CEEEeCCCchHHHH----H-HHHhcCCeEEEecCCCHHHHHHHHHhhcccc-------c------------ccccccccc
Q 013461 194 DLIVADEGVHWGIQ----N-GLYLSRSTVVYFKHNDMDSLRNTLERVTADN-------K------------RSNSFGVLG 249 (442)
Q Consensus 194 d~Vi~~~~~h~s~~----~-~~~l~g~~v~~~~~~d~~~Le~~l~~~~~~~-------~------------~a~~~g~~G 249 (442)
+.||+.+...+.+- . -+.+.+......-...++++++.+.....-. + .+|.+|.+-
T Consensus 120 r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv 199 (407)
T COG3844 120 RRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALV 199 (407)
T ss_pred ceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceE
Confidence 88777766555421 1 1222221111111224555655554321100 0 066666541
Q ss_pred cCCCcccccc-----CCCCCceeEEEEeccccc-cCCC--cEEEcCHHhHHHH--Hhh------------------CCce
Q 013461 250 RSGRGLTEHC-----GVPVDKIDIVTAAMGHAL-ATEG--GFCTGSARVVDHQ--RLS------------------SSGY 301 (442)
Q Consensus 250 ~~g~g~~~~~-----~v~~~~~diii~S~sK~l-g~~G--G~v~g~~~~i~~l--~~~------------------~~~~ 301 (442)
|+-++... .+...++|+-+++-.|.+ |.+| +++...+...+.. ..+ ....
T Consensus 200 --~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~ 277 (407)
T COG3844 200 --GWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGAR 277 (407)
T ss_pred --EeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCcccc
Confidence 12121111 122346799999999999 3444 4554443332211 111 0111
Q ss_pred eccCCCcHHH-HHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccC-C--CceeecCC----CCCEEEEEecCCCCCc
Q 013461 302 VFSASLPPYL-ASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDI-H--GLSIASNP----ESPIVFLILEKSTGSM 371 (442)
Q Consensus 302 ~~s~s~~p~~-aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~-~--g~~~~~~~----~~~i~~~~~~~~~~~~ 371 (442)
.|-.+.+|.. +++...+|++... ..+++++...+.++|.+.+... + ++++..+. .+.-+.+..+
T Consensus 278 rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp------ 351 (407)
T COG3844 278 RFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP------ 351 (407)
T ss_pred ceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC------
Confidence 1222334444 4444578887764 4578888888889998877653 2 45554432 2334444442
Q ss_pred hhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEec-CCCCHHHHHHHHHHHHHHHHHH
Q 013461 372 KNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVS-AAHSEADLVKACESLKRISAVV 437 (442)
Q Consensus 372 ~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~-~~~t~eei~~~i~~l~~~~~~~ 437 (442)
...++++. |.++||..-. +. |.-||+.++ ...+-+|+=.+++.|.+++++.
T Consensus 352 -----~~~~V~qa-Li~rGVigD~-R~--------P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 352 -----HGYQVMQA-LIDRGVIGDF-RE--------PDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred -----cHHHHHHH-HHHcCccccc-cC--------CCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 13467774 6667986432 11 455999876 4688999999999999988764
No 366
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.65 E-value=2.9e-06 Score=80.72 Aligned_cols=230 Identities=13% Similarity=0.127 Sum_probs=129.6
Q ss_pred EEEEcchHHHHHhhhhhh--ccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHhhcccccc-
Q 013461 172 SILYSYGLSTMFSAIPCF--CKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND-------MDSLRNTLERVTADNKR- 241 (442)
Q Consensus 172 ~i~~~sG~~a~~~ai~a~--~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d-------~~~Le~~l~~~~~~~~~- 241 (442)
.+-+.+|+.|+..+..-+ ..+...|.+++++++....-....|.++..|++-| .+.+-..|++..+....
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvL 176 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVL 176 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEE
Confidence 466778998887666433 45666799999999888888888899988887533 33333334443332211
Q ss_pred ----cc---------------------------------cccc-cccCCCccccccCCCCCceeEEEEeccccccCC---
Q 013461 242 ----SN---------------------------------SFGV-LGRSGRGLTEHCGVPVDKIDIVTAAMGHALATE--- 280 (442)
Q Consensus 242 ----a~---------------------------------~~g~-~G~~g~g~~~~~~v~~~~~diii~S~sK~lg~~--- 280 (442)
+| +|+- +.++..++-......+. -+++.||||.||.-
T Consensus 177 LH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~--~lva~S~SKnfgLYgER 254 (396)
T COG1448 177 LHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPE--LLVASSFSKNFGLYGER 254 (396)
T ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCc--EEEEehhhhhhhhhhhc
Confidence 11 1110 00001111000011111 68899999999853
Q ss_pred -CcE--EEcCHHhHHHHHh----hCCceeccCCCcHH-HHHHHHHHHH-------HHhcChHHHHHHHHHHHHHHHhhcc
Q 013461 281 -GGF--CTGSARVVDHQRL----SSSGYVFSASLPPY-LASAAITAID-------VLEENPDLITKLKKNTAILRTGLSD 345 (442)
Q Consensus 281 -GG~--v~g~~~~i~~l~~----~~~~~~~s~s~~p~-~aaaa~aal~-------~l~~~~~~~~~l~~~~~~l~~~L~~ 345 (442)
|++ ++-+.+..+.... ..+. .+| .||- .++.....|+ ..++...+++++.+++..|.+.|++
T Consensus 255 VGa~~vva~~~~~a~~v~sqlk~~iR~-~yS--nPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~ 331 (396)
T COG1448 255 VGALSVVAEDAEEADRVLSQLKAIIRT-NYS--NPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKA 331 (396)
T ss_pred cceeEEEeCCHHHHHHHHHHHHHHHHh-ccC--CCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444 3445555444321 1111 233 2433 3332222222 1123356888999999999999987
Q ss_pred C-C--CceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHH
Q 013461 346 I-H--GLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEAD 422 (442)
Q Consensus 346 ~-~--g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~ee 422 (442)
. + .+..... +..++... +- . + .+ ++++.++.||++... =||++.. +++..
T Consensus 332 ~~~~~~f~~i~~-Q~GMFsy~-Gl----s-~-----~Q-V~rLree~~IY~v~s-------------GRi~vaG-l~~~n 384 (396)
T COG1448 332 LGAPRNFDFIIS-QRGMFSYT-GL----S-P-----EQ-VDRLREEFGIYLVAS-------------GRINVAG-LNTSN 384 (396)
T ss_pred hCCCcccchHhh-cCceeecC-CC----C-H-----HH-HHHHHHhccEEEecC-------------Ceeeecc-CChhh
Confidence 3 1 2555433 44444432 11 1 1 13 445677889998753 3888865 78999
Q ss_pred HHHHHHHHHHH
Q 013461 423 LVKACESLKRI 433 (442)
Q Consensus 423 i~~~i~~l~~~ 433 (442)
|+.++++|.++
T Consensus 385 i~~va~ai~~v 395 (396)
T COG1448 385 IDYVAKAIAAV 395 (396)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 367
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.65 E-value=3.1e-06 Score=85.36 Aligned_cols=239 Identities=17% Similarity=0.199 Sum_probs=147.7
Q ss_pred ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCC-Cc--EEEEcchHHHHHhhhhhhccC--------C
Q 013461 125 HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGT-PD--SILYSYGLSTMFSAIPCFCKK--------G 193 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~-e~--~i~~~sG~~a~~~ai~a~~~~--------g 193 (442)
++...+++...+.+ ..+. +..+.++.....++-..++++++. ++ ..++++|+++|..++.+...+ +
T Consensus 75 ~~~a~~~~~~~~~~-nl~d--~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 75 PPVAAELLVSALNK-NLGD--PDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred HHHHHHHHHHHHhh-cCCC--cccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 46667777766655 1111 112235666666777777777776 33 488999999998777543211 1
Q ss_pred C------EEEeCCCchHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhccc--ccc------------------
Q 013461 194 D------LIVADEGVHWGIQNGLYLSRSTVVYFKH------NDMDSLRNTLERVTAD--NKR------------------ 241 (442)
Q Consensus 194 d------~Vi~~~~~h~s~~~~~~l~g~~v~~~~~------~d~~~Le~~l~~~~~~--~~~------------------ 241 (442)
. .|+++...|+++.+++.+.|.....++. -|++++++.+.+.+.. ...
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ 231 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELAD 231 (460)
T ss_pred cccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHH
Confidence 1 6999999999999999998876554431 2789999999887765 211
Q ss_pred -ccccccc----ccCCCccc---c---ccCCCCCceeEEEEeccccccCC--CcEE-EcCH-HhHHHHHhhC--------
Q 013461 242 -SNSFGVL----GRSGRGLT---E---HCGVPVDKIDIVTAAMGHALATE--GGFC-TGSA-RVVDHQRLSS-------- 298 (442)
Q Consensus 242 -a~~~g~~----G~~g~g~~---~---~~~v~~~~~diii~S~sK~lg~~--GG~v-~g~~-~~i~~l~~~~-------- 298 (442)
+...++. +.-|..+. + .+....+.+|-++.+++|.+..+ .|++ +-++ .+.+.+....
T Consensus 232 ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~ 311 (460)
T COG0076 232 IAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGI 311 (460)
T ss_pred HHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCc
Confidence 1111110 11111111 1 11122246788899999998532 3554 4455 3545443211
Q ss_pred CceeccCCCcHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecC
Q 013461 299 SGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEK 366 (442)
Q Consensus 299 ~~~~~s~s~~p~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~ 366 (442)
..+.-..+-+...+++..+.++.+- ...++.++..++.+++.+.|++.+.+++..++..|++.+..++
T Consensus 312 ~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 312 PNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred CceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 0111112223334555666777763 3456778888999999999999855999888899999999843
No 368
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.64 E-value=8.3e-07 Score=85.56 Aligned_cols=198 Identities=10% Similarity=0.101 Sum_probs=127.4
Q ss_pred CChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeC----
Q 013461 124 GHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVAD---- 199 (442)
Q Consensus 124 ~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~---- 199 (442)
-+|++++++.+.++.+-.--+ ......-..-...+.+..+...|.+.+.+++..+.|+..++.++..++.+|+--
T Consensus 39 ~~~e~iea~~~~~~~~v~Le~-~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV 117 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVELET-DLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELV 117 (395)
T ss_pred CCHHHHHHHHHHhcccceeee-ecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEccccc
Confidence 368999999998887422110 000000011123566666777778999999999999999998888755554421
Q ss_pred CCchHHHHHHHHhcCCeEEEecCC---CHHHHHHHHHhhcccccc--------------------ccccc--ccccCCCc
Q 013461 200 EGVHWGIQNGLYLSRSTVVYFKHN---DMDSLRNTLERVTADNKR--------------------SNSFG--VLGRSGRG 254 (442)
Q Consensus 200 ~~~h~s~~~~~~l~g~~v~~~~~~---d~~~Le~~l~~~~~~~~~--------------------a~~~g--~~G~~g~g 254 (442)
++.|+.+-+.++++|++++.+..- ...|++..+.+.+...-+ +|..+ ++-+.|.|
T Consensus 118 ~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg 197 (395)
T COG1921 118 EGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASG 197 (395)
T ss_pred cCCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCc
Confidence 268899999999999999988643 456777777665432111 22222 23333444
Q ss_pred cc--cccCCC---CCceeEEEEecccccc-CCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc
Q 013461 255 LT--EHCGVP---VDKIDIVTAAMGHALA-TEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE 324 (442)
Q Consensus 255 ~~--~~~~v~---~~~~diii~S~sK~lg-~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~ 324 (442)
.. ..++++ ..+.|+++.|-.|.|| ..+|+++|++++++.++.....+.... .+...++..++|+....
T Consensus 198 ~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~Ralrv--~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 198 ALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLKRALRV--DKETLAALEAALELYLQ 271 (395)
T ss_pred cccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHHHhhhhhhhhhc--CcHhHHHHHHHHHHHcC
Confidence 32 112221 2457999999999996 467999999999999877654433333 45555666778876653
No 369
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.54 E-value=8.5e-06 Score=87.76 Aligned_cols=288 Identities=12% Similarity=0.133 Sum_probs=158.5
Q ss_pred EeecCCCCCCCCChHHHHHHHHH---HHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhh
Q 013461 113 NFASANYLGLIGHEKLLESCTSA---LEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIP 187 (442)
Q Consensus 113 d~~s~~~l~~~~~p~v~ea~~~~---l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~ 187 (442)
.|-+.+|.+.-.+|.|.+.+.+- +..| +.+ .|-...|+-+...+++..+++++|.+ .+-++..++++.++++.
T Consensus 67 ~fig~G~y~~~~p~~i~r~v~~~p~~~Tay-tPy-Q~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~ 144 (939)
T TIGR00461 67 SYIGMGYYGTILPPVIQRNLLENPGWYTAY-TPY-QPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMAL 144 (939)
T ss_pred ccCCCCcCCCcCChHHHHHHHhCchhhhcC-CCC-ChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHH
Confidence 44444444443345555444431 2223 111 12235677888889999999999987 45777777766666555
Q ss_pred hhc---cCCCEEEeCCCchHHHHHHHH----hcCCeEEEecCCCHHHHHHHHHhhcccccc------------------c
Q 013461 188 CFC---KKGDLIVADEGVHWGIQNGLY----LSRSTVVYFKHNDMDSLRNTLERVTADNKR------------------S 242 (442)
Q Consensus 188 a~~---~~gd~Vi~~~~~h~s~~~~~~----l~g~~v~~~~~~d~~~Le~~l~~~~~~~~~------------------a 242 (442)
+.. ++++.|++++..|+.+...++ ..|.+++.+ |+++|++.++ .-..-. +
T Consensus 145 a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~---~~~~l~~~~~--~~~v~~q~Pn~~G~ied~~~i~~~~ 219 (939)
T TIGR00461 145 SFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV---DCSDIKKAVD--VFGCLLQYPATDGSILDYKQLIDAL 219 (939)
T ss_pred HHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE---cHHHHhhcCC--EEEEEEECCCCCeEEecHHHHHHHH
Confidence 532 334789999999998775443 567777766 4455554431 000000 3
Q ss_pred cccccc---ccCCCccccccCC-CCC--ceeEEEEeccccccC------C-CcEEEcCHHhHHHHHhh----------CC
Q 013461 243 NSFGVL---GRSGRGLTEHCGV-PVD--KIDIVTAAMGHALAT------E-GGFCTGSARVVDHQRLS----------SS 299 (442)
Q Consensus 243 ~~~g~~---G~~g~g~~~~~~v-~~~--~~diii~S~sK~lg~------~-GG~v~g~~~~i~~l~~~----------~~ 299 (442)
|..|.+ +.+... ...+ +|. +.||+++ -+|.||. + .||++.+++++..+-.. ..
T Consensus 220 h~~gal~~~~ad~~a---l~ll~~Pge~GaDi~vg-~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~ 295 (939)
T TIGR00461 220 HSHKSLVSVAADLMA---LTLLTPPGHYGADIVLG-SSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNT 295 (939)
T ss_pred HHcCCEEEEEechHH---hCCcCCHHHcCCcEEee-CCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCc
Confidence 333322 111000 0011 122 4789866 4666653 1 28888888877665210 01
Q ss_pred ceecc-----------CCCcHHHHHHHH----HH--HHHHh-c-ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEE
Q 013461 300 GYVFS-----------ASLPPYLASAAI----TA--IDVLE-E-NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIV 360 (442)
Q Consensus 300 ~~~~s-----------~s~~p~~aaaa~----aa--l~~l~-~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~ 360 (442)
+|.++ -+.+.+..+.++ ++ +.++- + ..++.++...+..++.+.|.+. |+++..++--.-+
T Consensus 296 ~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~~fF~~~ 374 (939)
T TIGR00461 296 ALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELINKTWFDTL 374 (939)
T ss_pred cceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCccceE
Confidence 22221 011112111111 12 22221 1 2345667778889999999884 9887643111122
Q ss_pred EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 361 FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
.+.++. ....++.++++ ++||.++... ...+++|++-.+|++||+.+++++.
T Consensus 375 ~v~~~~---------~~~~~i~~~~~-~~gi~l~~~~---------~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 375 TVKVGN---------GISSELLKAAE-EFNINLRAVD---------TTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred EEEeCC---------CCHHHHHHHHH-HCCCeeeecC---------CCEEEEEeecCCCHHHHHHHHHHhc
Confidence 233310 01346777654 5699976521 1349999999999999999999994
No 370
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.52 E-value=9.2e-05 Score=70.92 Aligned_cols=267 Identities=13% Similarity=0.071 Sum_probs=130.0
Q ss_pred cCcHHHHHHHHHHHhhhCC--CcEEEEcchHHHH-Hhhh-hh----hc-------cC-CCEEEeCCCchHHHHHHHHhcC
Q 013461 151 GTIDVHLDCEARIAKFLGT--PDSILYSYGLSTM-FSAI-PC----FC-------KK-GDLIVADEGVHWGIQNGLYLSR 214 (442)
Q Consensus 151 g~~~~~~~le~~lA~~~g~--e~~i~~~sG~~a~-~~ai-~a----~~-------~~-gd~Vi~~~~~h~s~~~~~~l~g 214 (442)
|..+...++++..|+++|. +++|+..+.+-.+ .-++ .+ .. +. .-..+++-|.|---..-++..|
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G 145 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG 145 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence 4555667999999999996 4666666655332 2222 11 11 11 2236777776555555567788
Q ss_pred CeEEEecCC----CHHHHHHHHHhhcccccc----------------------------cccccccccCCCc--------
Q 013461 215 STVVYFKHN----DMDSLRNTLERVTADNKR----------------------------SNSFGVLGRSGRG-------- 254 (442)
Q Consensus 215 ~~v~~~~~~----d~~~Le~~l~~~~~~~~~----------------------------a~~~g~~G~~g~g-------- 254 (442)
.+.+.+|.+ ||+.+|++..+...-... +..|-++-+....
T Consensus 146 iemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~ 225 (425)
T PF12897_consen 146 IEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEE 225 (425)
T ss_dssp -EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSS
T ss_pred cEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccc
Confidence 888888753 899999987653221000 2222222111111
Q ss_pred ----------cccccCCCCCceeEEEEeccccc--cCCCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHH
Q 013461 255 ----------LTEHCGVPVDKIDIVTAAMGHAL--ATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL 322 (442)
Q Consensus 255 ----------~~~~~~v~~~~~diii~S~sK~l--g~~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l 322 (442)
.++..|- .++.+..+|.||.- |++-+|++++++-++.++.... .-+.+..=+.+.. -.+.+
T Consensus 226 ~~~~~~nil~~~~~AGn--pdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~--~~tIgpdKvNQLR---Hvrff 298 (425)
T PF12897_consen 226 PRDALLNILDACAKAGN--PDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLS--VQTIGPDKVNQLR---HVRFF 298 (425)
T ss_dssp S------HHHHHHHTT---TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHH--HH-S---HHHHHH---HHHHH
T ss_pred cchhhhHHHHHHHHcCC--CCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhc--CceeCccHHHHHH---HHHHh
Confidence 1112222 34678899999977 4434889999888877754321 1122222222111 11222
Q ss_pred hcCh-HHHHHH-----------HHHHHHHHHhhc-cCCCc-eeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHh
Q 013461 323 EENP-DLITKL-----------KKNTAILRTGLS-DIHGL-SIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKE 388 (442)
Q Consensus 323 ~~~~-~~~~~l-----------~~~~~~l~~~L~-~~~g~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~ 388 (442)
...+ .+.++. ....+.|.+.|. .. ++ +...+.++.|+++.+.+. .+.++++ +.++
T Consensus 299 ~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld~~~G---------~AkrvV~-lake 367 (425)
T PF12897_consen 299 KDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLDVLDG---------TAKRVVE-LAKE 367 (425)
T ss_dssp HSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEEESTT----------HHHHHH-HHHH
T ss_pred cChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEecCCC---------hHHHHHH-HHHH
Confidence 2212 233333 333344455555 33 33 344455677888887442 1346776 4677
Q ss_pred CCEEEeeccC-cccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 389 DGVFVVTSKR-SMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 389 ~GV~v~~~~~-~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.||.+++... +...+.+....|||+++. -+.+|++.+.+.+.-+++-
T Consensus 368 AGV~LT~AGAtfPyg~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 368 AGVALTPAGATFPYGKDPRDSNIRIAPSY-PSLEELETAMDVFATCVKL 415 (425)
T ss_dssp TTEE---TTTTSGGG--TTS-EEEE--SS-S-HHHHHHHHHHHHHHHHH
T ss_pred hCceeCCCCCCCCCCCCCCCCcEEecCCC-CCHHHHHHHHHHHHHHHHH
Confidence 8999998543 222222112359999997 4789999999998877653
No 371
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.49 E-value=5.4e-06 Score=81.87 Aligned_cols=253 Identities=17% Similarity=0.243 Sum_probs=121.8
Q ss_pred ccccCcHHHHHHHHHHHhhhCCCcE--EEEcchHHH---HHhhhhhhccCCCEEEeCCCchHHHHHHHHh----cCCeEE
Q 013461 148 GFYGTIDVHLDCEARIAKFLGTPDS--ILYSYGLST---MFSAIPCFCKKGDLIVADEGVHWGIQNGLYL----SRSTVV 218 (442)
Q Consensus 148 ~~~g~~~~~~~le~~lA~~~g~e~~--i~~~sG~~a---~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l----~g~~v~ 218 (442)
...|+.+..-+++..++++.|.+-+ =++..++.+ +..+++.-.++++.|++++..|+.....++. .+.+++
T Consensus 104 isQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv 183 (429)
T PF02347_consen 104 ISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIV 183 (429)
T ss_dssp GBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEE
Confidence 3567888889999999999999854 455555543 3333343334456899999999998775543 456666
Q ss_pred EecCCC----------------------HHHHHHHHHhhccccccccccccc---ccCCCccccccCCC-C--CceeEEE
Q 013461 219 YFKHND----------------------MDSLRNTLERVTADNKRSNSFGVL---GRSGRGLTEHCGVP-V--DKIDIVT 270 (442)
Q Consensus 219 ~~~~~d----------------------~~~Le~~l~~~~~~~~~a~~~g~~---G~~g~g~~~~~~v~-~--~~~diii 270 (442)
.++.++ .++++++.+. +|..|.+ |..... ...+. | -+.||++
T Consensus 184 ~~~~~~~~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~-------~h~~gal~~~~ad~~a---L~~l~~Pge~GADI~v 253 (429)
T PF02347_consen 184 EVPLDEDGTTDDDDTAAVMVQNPNTFGVFEDIKEIADI-------AHAAGALVIVGADPNA---LGGLKSPGEYGADIVV 253 (429)
T ss_dssp EE-BBTTCSB-STTEEEEEEESS-TTSB--THHHHHHH-------HHHTT-EEEECGGCCG---CCTC--GGGGT-SEEE
T ss_pred EecccccCCccccCeEEEEeecCCCCceEeeHHHHHHH-------HHHcCCEEEEecCHHH---HhCcCChhhcCccEEe
Confidence 665321 1222222222 2322221 111110 01111 1 2368998
Q ss_pred EeccccccCC----C---cEEEcCHHhHHHHHh----------hCCceec---------------c--CCCcHHHHHHHH
Q 013461 271 AAMGHALATE----G---GFCTGSARVVDHQRL----------SSSGYVF---------------S--ASLPPYLASAAI 316 (442)
Q Consensus 271 ~S~sK~lg~~----G---G~v~g~~~~i~~l~~----------~~~~~~~---------------s--~s~~p~~aaaa~ 316 (442)
++ +|.||.+ | ||++.+++++..+-. ...+|.. | ++...+.+.++.
T Consensus 254 g~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~ 332 (429)
T PF02347_consen 254 GE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAA 332 (429)
T ss_dssp EC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHH
T ss_pred eC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHH
Confidence 76 9999732 2 788888887665521 0111211 0 011222221221
Q ss_pred HHHHHH-h-cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEe
Q 013461 317 TAIDVL-E-ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVV 394 (442)
Q Consensus 317 aal~~l-~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~ 394 (442)
.-+..+ . ...++.++...+..|+.+.|.++.+..+. ..+++-..+... .+ ....++.++.+. .|+...
T Consensus 333 ~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~---~~~f~e~v~~~~-----~~-~~~~~l~~~~~~-~gl~~~ 402 (429)
T PF02347_consen 333 IYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD---NPFFFEFVVVFS-----KD-KEVEELLKRGIE-GGLNLR 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS---SSSBSSEEEEES-----S--HHHHHHHHTT-----EEEG
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC---CCCceeeeeecC-----Cc-HHHHHHHHHHHh-cCCCcc
Confidence 122222 1 23567778888999999999986344432 222222221111 11 122234444332 353321
Q ss_pred eccCcccccCCCCCceEEEecCCCCHHHHHHHHHHH
Q 013461 395 TSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESL 430 (442)
Q Consensus 395 ~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l 430 (442)
++. ...+-+|++-.+|++|||+++++|
T Consensus 403 ---~~~------~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 403 ---YPD------DGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ---GG-------SSEEEEE--TT--HHHHHHHHH--
T ss_pred ---ccC------CCeEEEEccCCCCHHHHHHHHhcC
Confidence 111 135899999999999999999875
No 372
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.48 E-value=2e-05 Score=77.85 Aligned_cols=210 Identities=16% Similarity=0.172 Sum_probs=126.6
Q ss_pred cHHHHHHHHHHHhhhCCC---------cEEEEcchHHHHHhhhhhhc--------cC-----C-CEEEeCCCchHHHHHH
Q 013461 153 IDVHLDCEARIAKFLGTP---------DSILYSYGLSTMFSAIPCFC--------KK-----G-DLIVADEGVHWGIQNG 209 (442)
Q Consensus 153 ~~~~~~le~~lA~~~g~e---------~~i~~~sG~~a~~~ai~a~~--------~~-----g-d~Vi~~~~~h~s~~~~ 209 (442)
.+...++-+.+++++|.+ ..+++++|+++|..++.+.. .. + -+|++++..|.++.++
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 445555666777778855 36889999999988774432 11 2 2688889899999999
Q ss_pred HHhcCCeEEEecCC-----CHHHHHHHHHhhcccc--cc-------------------------ccccccc--ccCCC--
Q 013461 210 LYLSRSTVVYFKHN-----DMDSLRNTLERVTADN--KR-------------------------SNSFGVL--GRSGR-- 253 (442)
Q Consensus 210 ~~l~g~~v~~~~~~-----d~~~Le~~l~~~~~~~--~~-------------------------a~~~g~~--G~~g~-- 253 (442)
+.+.|..++.++.+ |+++|++.+++..... +. .+++.+. +.-|.
T Consensus 158 a~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~ 237 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSA 237 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGG
T ss_pred cceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccc
Confidence 99999988887754 6789999887754331 10 1111111 11111
Q ss_pred cccc-----ccCCCCCceeEEEEeccccccCCC--cEEEc-CHHhHHHHHhhCCceec---------------cCCCc-H
Q 013461 254 GLTE-----HCGVPVDKIDIVTAAMGHALATEG--GFCTG-SARVVDHQRLSSSGYVF---------------SASLP-P 309 (442)
Q Consensus 254 g~~~-----~~~v~~~~~diii~S~sK~lg~~G--G~v~g-~~~~i~~l~~~~~~~~~---------------s~s~~-p 309 (442)
-+++ ..++ +.+|=++.+.+|.++.+- |++.. ++............|.+ +-..+ .
T Consensus 238 ~~~~~~~~~~~gi--~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~ 315 (373)
T PF00282_consen 238 LLSPEYRHLLFGI--ERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRR 315 (373)
T ss_dssp GGHCTTGGGGTTG--GGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGH
T ss_pred ccccccccccccc--ccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccccccc
Confidence 0111 1233 457888999999998542 55544 44444322111112222 11111 3
Q ss_pred HHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEe
Q 013461 310 YLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLIL 364 (442)
Q Consensus 310 ~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~ 364 (442)
..+.....+++.+- ...++.++..++.++|.+.|++.+++++..++..+++.+++
T Consensus 316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 33334445555442 23567788888999999999998889998888889988875
No 373
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.43 E-value=3.7e-05 Score=73.05 Aligned_cols=144 Identities=14% Similarity=0.153 Sum_probs=80.1
Q ss_pred ccC-cHHHHHHHHHHHhhhCCCcEEE---EcchHHHHHhhhhhhccCCCEEEe-CCCchHHHHHHHHhcC----------
Q 013461 150 YGT-IDVHLDCEARIAKFLGTPDSIL---YSYGLSTMFSAIPCFCKKGDLIVA-DEGVHWGIQNGLYLSR---------- 214 (442)
Q Consensus 150 ~g~-~~~~~~le~~lA~~~g~e~~i~---~~sG~~a~~~ai~a~~~~gd~Vi~-~~~~h~s~~~~~~l~g---------- 214 (442)
||. ...++.||+-.|+.+|+|.+++ +.||++|+..++.++++|||+++. ...-|-.+...+-+.+
T Consensus 49 YGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G 128 (403)
T PF06838_consen 49 YGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG 128 (403)
T ss_dssp T-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred CCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence 444 3467889999999999999988 468999999999999999999774 3333444444443333
Q ss_pred CeEEEecC-----CCHHHHHHHHHhhcccccc---------------------------cccccccccCCCc-cccccCC
Q 013461 215 STVVYFKH-----NDMDSLRNTLERVTADNKR---------------------------SNSFGVLGRSGRG-LTEHCGV 261 (442)
Q Consensus 215 ~~v~~~~~-----~d~~~Le~~l~~~~~~~~~---------------------------a~~~g~~G~~g~g-~~~~~~v 261 (442)
.+...++. -|.+.+++.++..++-... .-..-++-+.-.| +.|..
T Consensus 129 i~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~-- 206 (403)
T PF06838_consen 129 IKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ-- 206 (403)
T ss_dssp -EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS--
T ss_pred ceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc--
Confidence 22333332 1566666666643321111 0001111111111 11111
Q ss_pred CCC--ceeEEEEecccccc----CCCcEEEcCHHhHHHHH
Q 013461 262 PVD--KIDIVTAAMGHALA----TEGGFCTGSARVVDHQR 295 (442)
Q Consensus 262 ~~~--~~diii~S~sK~lg----~~GG~v~g~~~~i~~l~ 295 (442)
+|. ..|++.||+=|-.| ..|||++|++++++...
T Consensus 207 EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 207 EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAA 246 (403)
T ss_dssp -GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHH
T ss_pred CccccchhheeccceeCCCCCccCcCCEEechHHHHHHHH
Confidence 122 36999999999986 35899999999999763
No 374
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.31 E-value=5.1e-05 Score=73.32 Aligned_cols=283 Identities=15% Similarity=0.151 Sum_probs=155.9
Q ss_pred cccCcHHHHHHHHHHHhhhCCCcEEE-EcchHH---HHHhhhhhhc-cC----CCEEEeCCCchHHHHHHHHhcCCeEEE
Q 013461 149 FYGTIDVHLDCEARIAKFLGTPDSIL-YSYGLS---TMFSAIPCFC-KK----GDLIVADEGVHWGIQNGLYLSRSTVVY 219 (442)
Q Consensus 149 ~~g~~~~~~~le~~lA~~~g~e~~i~-~~sG~~---a~~~ai~a~~-~~----gd~Vi~~~~~h~s~~~~~~l~g~~v~~ 219 (442)
..|..++..+|++.|++..|.+.+-+ -++|++ +=..+|+++- .+ .+++++++..|+.--..+.+.|-+++.
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~ 183 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVV 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEE
Confidence 45667888999999999999987744 456653 3345666663 33 358999999999877788899999999
Q ss_pred ecCC-----CHHHHHHHHHhhcccc----cc---------------ccccccc-ccCCCccccccCC-CCC--ceeEEEE
Q 013461 220 FKHN-----DMDSLRNTLERVTADN----KR---------------SNSFGVL-GRSGRGLTEHCGV-PVD--KIDIVTA 271 (442)
Q Consensus 220 ~~~~-----d~~~Le~~l~~~~~~~----~~---------------a~~~g~~-G~~g~g~~~~~~v-~~~--~~diii~ 271 (442)
++.+ |++||++.+.+..... +. .|..|-. --+|.-+-...|+ .|. ..|++=.
T Consensus 184 V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~Hl 263 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHL 263 (496)
T ss_pred EecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEe
Confidence 8864 7889888877432210 00 2222210 0011111111122 122 3588888
Q ss_pred eccccccCC---C----cEEEcCHHhHHHHHh-----hCCceecc--------CCCcHH----HHHHHHHHHHHHhc--C
Q 013461 272 AMGHALATE---G----GFCTGSARVVDHQRL-----SSSGYVFS--------ASLPPY----LASAAITAIDVLEE--N 325 (442)
Q Consensus 272 S~sK~lg~~---G----G~v~g~~~~i~~l~~-----~~~~~~~s--------~s~~p~----~aaaa~aal~~l~~--~ 325 (442)
-++|+|+.+ | |=|..+.+++.++-. ....|... -+.+|+ ....+.+-+..+-. .
T Consensus 264 NLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL 343 (496)
T COG1003 264 NLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGL 343 (496)
T ss_pred ecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHH
Confidence 899999521 2 445555666555432 11111111 001111 11122223333321 1
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCC
Q 013461 326 PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCR 405 (442)
Q Consensus 326 ~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~ 405 (442)
...-+...-|..|+.+.|+.. +++.-.+..+.-+=.+-+.....+.......++++++++ .|+......+|..
T Consensus 344 ~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD-~GfHaPT~~FPli---- 416 (496)
T COG1003 344 KQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLD-YGFHAPTMYFPLI---- 416 (496)
T ss_pred HHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHh-cCCCCCcccCccc----
Confidence 223334445678888888763 333212221222222111000000111234578888665 5887554444311
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 406 LPVGIRLFVSAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 406 ~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
.+..+-|-++-.-|++++|++++++.++.++..
T Consensus 417 V~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 417 VAGTLMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred cccceeecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 135589999999999999999999999877653
No 375
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.29 E-value=0.00015 Score=70.76 Aligned_cols=296 Identities=18% Similarity=0.241 Sum_probs=164.8
Q ss_pred ChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcE---EEEcchHHHHHhhhhhhc----c-CC---
Q 013461 125 HEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDS---ILYSYGLSTMFSAIPCFC----K-KG--- 193 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~---i~~~sG~~a~~~ai~a~~----~-~g--- 193 (442)
+|+..+-..+.+.+| ..+-+..+.+......+.-..+|.+++.++. ..+++|++++..+..... . +|
T Consensus 93 ~~~~~~l~~~~~~k~--N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~ 170 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKF--NPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDK 170 (491)
T ss_pred CcchhhHHHHHHhhc--CccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCC
Confidence 667777777777776 4556666777777888888888998886543 445667787555554321 1 12
Q ss_pred CEEEeCCCchHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhcccc----------------------------
Q 013461 194 DLIVADEGVHWGIQNGLYLSRSTVVYFKHN------DMDSLRNTLERVTADN---------------------------- 239 (442)
Q Consensus 194 d~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~------d~~~Le~~l~~~~~~~---------------------------- 239 (442)
-.|++....|.+..++.+.-+.++..++.. |+..+.+.+.+.+...
T Consensus 171 p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~i 250 (491)
T KOG1383|consen 171 PNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDI 250 (491)
T ss_pred ccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCC
Confidence 247888888999998888777666555432 2333333322221110
Q ss_pred cc---cccccccccCCCccccccCCCCCceeEEEEeccc-cccCCC-cEE-EcCHHhHHHHHhh-----C---CceeccC
Q 013461 240 KR---SNSFGVLGRSGRGLTEHCGVPVDKIDIVTAAMGH-ALATEG-GFC-TGSARVVDHQRLS-----S---SGYVFSA 305 (442)
Q Consensus 240 ~~---a~~~g~~G~~g~g~~~~~~v~~~~~diii~S~sK-~lg~~G-G~v-~g~~~~i~~l~~~-----~---~~~~~s~ 305 (442)
+. +..-|.+-.-+....+.|+.....+.=+..+-+| +|.+.| |++ ..++++..++-.. + ..++...
T Consensus 251 piHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~Tlng 330 (491)
T KOG1383|consen 251 PIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNG 330 (491)
T ss_pred ceeecccCccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCccccc
Confidence 00 1111111000011111233322222222333344 222334 443 4455554443211 1 1111222
Q ss_pred CCcHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHH
Q 013461 306 SLPPYLASAAITAIDVLEE--NPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIAD 383 (442)
Q Consensus 306 s~~p~~aaaa~aal~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~ 383 (442)
|-+..+.++..+++-.+-+ ..+..+++.+....+++++++++++.+.+. |.+.+....... .+ ..++.+
T Consensus 331 SR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk---p~vs~~~~~s~~---~~---i~elsd 401 (491)
T KOG1383|consen 331 SRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK---PLVSFILFGSND---VN---IFELSD 401 (491)
T ss_pred CCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC---CcEEEEEccCCc---cc---hhhhhH
Confidence 3344555566666654432 245677888999999999999989998875 555555433211 11 235666
Q ss_pred HHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHH-HHHHHHHHHHHHHHhhc
Q 013461 384 WALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADL-VKACESLKRISAVVLRD 440 (442)
Q Consensus 384 ~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei-~~~i~~l~~~~~~~~~~ 440 (442)
.|.+.|-.+..... |+++-+++...++.+++ ++++.-|++++.++.+.
T Consensus 402 -~l~~~GW~lnalq~--------P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 402 -LLRKKGWILNALQF--------PAAIHICVTRVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred -HHHhcCcCccccCC--------CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhC
Confidence 46677887655433 45688888888888884 67777788888777654
No 376
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.28 E-value=6.2e-07 Score=85.74 Aligned_cols=191 Identities=16% Similarity=0.238 Sum_probs=43.4
Q ss_pred ChHHHHHHHHHHHhcCCC----CCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhhhhccCCCEEEeCC
Q 013461 125 HEKLLESCTSALEKYGVG----SCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPCFCKKGDLIVADE 200 (442)
Q Consensus 125 ~p~v~ea~~~~l~~~g~~----~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~ 200 (442)
++++.+++.+....|-+- ..|.|+. -+..+++.++.+.|.|.++++++...|+..++.+++. |.+|++.+
T Consensus 19 ~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~-----R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~-~~EvIvsR 92 (367)
T PF03841_consen 19 SEEAIEAVAEVASGYSNLEYDLETGKRGS-----RYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAK-GKEVIVSR 92 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 478888888887765321 1233321 1346788899999999999999999999988888764 55666655
Q ss_pred CchH------HHHHHHHhcCCeEEEecCCC---HHHHHHHHHhhcccccc-------------------------ccccc
Q 013461 201 GVHW------GIQNGLYLSRSTVVYFKHND---MDSLRNTLERVTADNKR-------------------------SNSFG 246 (442)
Q Consensus 201 ~~h~------s~~~~~~l~g~~v~~~~~~d---~~~Le~~l~~~~~~~~~-------------------------a~~~g 246 (442)
+.-. -+.+.++.+|++++.+..-+ .+|.++.+.+.+...-+ .|++-
T Consensus 93 GelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp 172 (367)
T PF03841_consen 93 GELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLP 172 (367)
T ss_dssp --------------------------------------------------------------------HHHHHHHHHT--
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHhhcCCc
Confidence 4322 24566778898887776433 44455544433321100 33333
Q ss_pred ccccCCCcccc---ccCC---------CCCceeEEEEeccccccC-CCcEEEcCHHhHHHHHhhCCceeccCCCcHHHHH
Q 013461 247 VLGRSGRGLTE---HCGV---------PVDKIDIVTAAMGHALAT-EGGFCTGSARVVDHQRLSSSGYVFSASLPPYLAS 313 (442)
Q Consensus 247 ~~G~~g~g~~~---~~~v---------~~~~~diii~S~sK~lg~-~GG~v~g~~~~i~~l~~~~~~~~~s~s~~p~~aa 313 (442)
++-+-|.|... .+|+ -...+|+++.|-.|.+|. ..|+++|++++++.++.......+ -..-...+
T Consensus 173 ~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~pl~Ral--rvdK~tla 250 (367)
T PF03841_consen 173 VIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHPLGRAL--RVDKLTLA 250 (367)
T ss_dssp EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHHHTTT---B--HHHHH
T ss_pred EEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCCCcceE--eeCHHHHH
Confidence 33333443321 1222 124589999999999974 469999999999998865311111 22456666
Q ss_pred HHHHHHHHHh
Q 013461 314 AAITAIDVLE 323 (442)
Q Consensus 314 aa~aal~~l~ 323 (442)
+..++|+...
T Consensus 251 ~L~atL~~Y~ 260 (367)
T PF03841_consen 251 ALEATLRLYL 260 (367)
T ss_dssp HHHHHHHH--
T ss_pred HHHHHHHHHH
Confidence 6667777553
No 377
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.26 E-value=0.00015 Score=69.07 Aligned_cols=296 Identities=15% Similarity=0.215 Sum_probs=159.8
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhh----CC---CcEEEEcch-HHHHHhhhhhhc-cCCCEE
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL----GT---PDSILYSYG-LSTMFSAIPCFC-KKGDLI 196 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~----g~---e~~i~~~sG-~~a~~~ai~a~~-~~gd~V 196 (442)
..+++.+...+...|- +-+.|..+....-+++.+|+|. |. ++.|+.++| +.|+..++..++ +++|-|
T Consensus 89 ~Dai~RA~~~L~~~gG----s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~Gv 164 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGG----SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGV 164 (475)
T ss_pred HHHHHHHHHHHHhcCC----cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCce
Confidence 4667777777766432 3334444444555666666665 41 233555554 588888777664 567789
Q ss_pred EeCCCchHHHHHHHHhcCCeEEEec--C-----CCHHHHHHHHHhhcccccc---------------------------c
Q 013461 197 VADEGVHWGIQNGLYLSRSTVVYFK--H-----NDMDSLRNTLERVTADNKR---------------------------S 242 (442)
Q Consensus 197 i~~~~~h~s~~~~~~l~g~~v~~~~--~-----~d~~~Le~~l~~~~~~~~~---------------------------a 242 (442)
+++-+-|+-+...+.+.|+..+.|- . -|.++|++.+++..+.... +
T Consensus 165 liPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa 244 (475)
T KOG0258|consen 165 LIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFA 244 (475)
T ss_pred EeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHH
Confidence 9998888877777777777655442 1 2788898888776543211 1
Q ss_pred ccccc--ccc---------CCCc------cccccC-CCCCcee-EEEEeccccc----cCCCcEE--E-cCHHhHHHHHh
Q 013461 243 NSFGV--LGR---------SGRG------LTEHCG-VPVDKID-IVTAAMGHAL----ATEGGFC--T-GSARVVDHQRL 296 (442)
Q Consensus 243 ~~~g~--~G~---------~g~g------~~~~~~-v~~~~~d-iii~S~sK~l----g~~GG~v--~-g~~~~i~~l~~ 296 (442)
+.-|+ +.+ .+.- ...+.| .-++.+. +...|.||++ |..||+. + -++++.+.+..
T Consensus 245 ~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~K 324 (475)
T KOG0258|consen 245 AEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKK 324 (475)
T ss_pred HHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHH
Confidence 11111 110 0000 000111 1122222 3356778998 3567884 2 23444433322
Q ss_pred hCCceeccC-C---------CcHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEE-Ee
Q 013461 297 SSSGYVFSA-S---------LPPYLASAAITAIDVL-EENPDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFL-IL 364 (442)
Q Consensus 297 ~~~~~~~s~-s---------~~p~~aaaa~aal~~l-~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~-~~ 364 (442)
....-.++. + .||.. +....+.. .+-+.+.+.++++.+.+.+.+++++|+.+... ++.++.+ .+
T Consensus 325 l~si~lc~~V~GQ~~vdl~VnPP~P---gd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~-qGAMY~fP~i 400 (475)
T KOG0258|consen 325 LASIKLCPQVSGQKLVDLVVNPPKP---GDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPV-QGAMYLFPQI 400 (475)
T ss_pred HHhhhhcCCccchhhhceecCCCCC---CCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccC-ccceeecccc
Confidence 111000100 0 01111 11111111 12346788899999999999999999998754 4444333 23
Q ss_pred cCCCCC--------chhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 365 EKSTGS--------MKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 365 ~~~~~~--------~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
..+... ..+|. =.+.++|+..||.+.|++.+.-..+ .-.+|..+-.. . + +.++.++++-++
T Consensus 401 ~lP~kaie~A~~~~~~PD~----FYc~~LLe~tGIcvVPGSGFGQ~~G--tyH~R~TiLp~---~-~-~~i~~~~~fH~~ 469 (475)
T KOG0258|consen 401 SLPPKAIEAAKALGIAPDE----FYCLKLLEATGICVVPGSGFGQKEG--TYHFRTTILPP---G-L-EIIEKFKKFHAE 469 (475)
T ss_pred cCCHHHHHHHHHhCCCCcH----HHHHHHHHhcCeEEecCCCCCCCCc--eeEEEEeecCc---h-h-HHHHHHHHHHHH
Confidence 222110 00111 1356788889999999987653221 12388877442 2 4 777888887777
Q ss_pred Hhhc
Q 013461 437 VLRD 440 (442)
Q Consensus 437 ~~~~ 440 (442)
++.+
T Consensus 470 f~~~ 473 (475)
T KOG0258|consen 470 FMDE 473 (475)
T ss_pred HHHh
Confidence 7654
No 378
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.26 E-value=0.00042 Score=65.51 Aligned_cols=314 Identities=18% Similarity=0.198 Sum_probs=169.3
Q ss_pred CeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhCCCcEEEEcchHHHHHhhhh
Q 013461 108 GKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIP 187 (442)
Q Consensus 108 G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g~e~~i~~~sG~~a~~~ai~ 187 (442)
+.-+||+-+-. |. -.+.+..-.++-.-...++|+|.++ .|++.+.+.+|.+..+-+.+|-.|=...++
T Consensus 45 edv~IDLLTDS--GT---gams~~qwaamm~GDEAYagsrs~~-------~L~~avkdifGfq~~iPthQGRgAE~Il~~ 112 (471)
T COG3033 45 EDVFIDLLTDS--GT---GAMTDKQWAAMMRGDEAYAGSRSYY-------ALADAVKDIFGFQYTIPTHQGRGAENILIP 112 (471)
T ss_pred cceEEEeeccC--Cc---ccccHHHHHHHhccchhhcccccHH-------HHHHHHHHhcCceeeeeccCCccHHHHHHH
Confidence 44578874322 11 1233333344444334456666654 789999999999999999898766555565
Q ss_pred hhccC-----CCEEEeCCCchHHHHHH-HHhcCCeEEEec--------------CC-CHHHHHHHHHhhcccccc-----
Q 013461 188 CFCKK-----GDLIVADEGVHWGIQNG-LYLSRSTVVYFK--------------HN-DMDSLRNTLERVTADNKR----- 241 (442)
Q Consensus 188 a~~~~-----gd~Vi~~~~~h~s~~~~-~~l~g~~v~~~~--------------~~-d~~~Le~~l~~~~~~~~~----- 241 (442)
.+.++ |...++...+|+-+..+ .+..|+.++.+. -| |++-|++++++....+..
T Consensus 113 i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~t 192 (471)
T COG3033 113 ILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLT 192 (471)
T ss_pred HHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEE
Confidence 55554 44444555666665544 555666654322 11 788999999987655321
Q ss_pred ------------------------cccccccccCCCcccccc-------CCCC-----------CceeEEEEecccc-cc
Q 013461 242 ------------------------SNSFGVLGRSGRGLTEHC-------GVPV-----------DKIDIVTAAMGHA-LA 278 (442)
Q Consensus 242 ------------------------a~~~g~~G~~g~g~~~~~-------~v~~-----------~~~diii~S~sK~-lg 278 (442)
.|++-++-+..|..-..| +... +=.|-++.|.-|- +-
T Consensus 193 iT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lv 272 (471)
T COG3033 193 ITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLV 272 (471)
T ss_pred EeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccccee
Confidence 222221111111000000 0000 0124455555443 33
Q ss_pred CCCcEEEcCHH----hHHHHHhhC---CceeccCCCcHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHhhccCCCcee
Q 013461 279 TEGGFCTGSAR----VVDHQRLSS---SGYVFSASLPPYLASAAITAIDVLEENPDLITKLKKNTAILRTGLSDIHGLSI 351 (442)
Q Consensus 279 ~~GG~v~g~~~----~i~~l~~~~---~~~~~s~s~~p~~aaaa~aal~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 351 (442)
..|||++.+++ +....+... .++.-.+++..-.+.+....|..--+.+ ..+.--+..+||.++|.+. |+++
T Consensus 273 nmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~-yl~~Rv~Qv~YL~~~l~~~-GVpi 350 (471)
T COG3033 273 NMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFD-YLAHRVAQVQYLADGLEEA-GVPI 350 (471)
T ss_pred ccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHhc-CCee
Confidence 46899877765 444444321 1111112233222222222232222333 3344445678999999987 9988
Q ss_pred ecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc------CCCC--CceEEEecC-CCCHHH
Q 013461 352 ASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK------CRLP--VGIRLFVSA-AHSEAD 422 (442)
Q Consensus 352 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~------~~~~--~~iRi~~~~-~~t~ee 422 (442)
..+.+++-+++....-....+.+..-++.++.++.++.||-..-......++ ..+| .-+|+.++. .-|.+.
T Consensus 351 ~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~H 430 (471)
T COG3033 351 VQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTH 430 (471)
T ss_pred EecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhH
Confidence 7777777777775432211222333456677767778898765433222111 1112 239999885 468999
Q ss_pred HHHHHHHHHHHHH
Q 013461 423 LVKACESLKRISA 435 (442)
Q Consensus 423 i~~~i~~l~~~~~ 435 (442)
+|.++++++++.+
T Consensus 431 mD~V~~a~~~l~e 443 (471)
T COG3033 431 MDFVIEAFKALKE 443 (471)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987754
No 379
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.21 E-value=0.0002 Score=69.26 Aligned_cols=299 Identities=14% Similarity=0.158 Sum_probs=158.0
Q ss_pred eEEEeecCCCCCCCCChHHHH-HHHHHHHhcCCCCCc--cCccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHh
Q 013461 110 EVVNFASANYLGLIGHEKLLE-SCTSALEKYGVGSCG--PRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFS 184 (442)
Q Consensus 110 ~~id~~s~~~l~~~~~p~v~e-a~~~~l~~~g~~~~~--~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ 184 (442)
.+..|-+.+|.+.-. |.++. .+.+-=.-| ..++. |--..|.-+...+....++++.|.+ .+=.+-.++.+-++
T Consensus 75 ~~~sfiG~GyY~~~~-P~vI~rnile~pewy-TaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEA 152 (450)
T COG0403 75 VFTSFIGAGYYDTYT-PPVILRNILENPEWY-TAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEA 152 (450)
T ss_pred hhhhhccCcccCCcC-cHHHHHHhhcCcccc-ccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHH
Confidence 444555556655543 44443 433211112 12221 2233466667778889999999976 55667777766666
Q ss_pred hhhhh---ccCCCEEEeCCCchHHHHHHHHh----cCCeEEEecCCCHHHHHHHHHhhcccccc----------------
Q 013461 185 AIPCF---CKKGDLIVADEGVHWGIQNGLYL----SRSTVVYFKHNDMDSLRNTLERVTADNKR---------------- 241 (442)
Q Consensus 185 ai~a~---~~~gd~Vi~~~~~h~s~~~~~~l----~g~~v~~~~~~d~~~Le~~l~~~~~~~~~---------------- 241 (442)
+..+. .++.+.+++++.+|+.+...++- .|.+++..+.+|.++|++. +...-....
T Consensus 153 m~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~ 231 (450)
T COG0403 153 MLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRA 231 (450)
T ss_pred HHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhc-cccCeEEEEEecCCCCCccchhHHH
Confidence 55544 23468899999999998887653 3467777777788887776 321100000
Q ss_pred ----ccccccc---ccCCC--ccccccCCCCCceeEEEEeccccccC----CC---cEEEcCHHhHHHHHhh--------
Q 013461 242 ----SNSFGVL---GRSGR--GLTEHCGVPVDKIDIVTAAMGHALAT----EG---GFCTGSARVVDHQRLS-------- 297 (442)
Q Consensus 242 ----a~~~g~~---G~~g~--g~~~~~~v~~~~~diii~S~sK~lg~----~G---G~v~g~~~~i~~l~~~-------- 297 (442)
+|+.|.+ +.+.. ++....| ..+.||++|+.. -||. +| ||.+.+++.+..+--.
T Consensus 232 l~~~~h~~~al~~v~aDplaL~LL~pPG--e~GADIvvG~~Q-rfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~ 308 (450)
T COG0403 232 LIEAAHSAGALVIVAADPLALGLLKPPG--EFGADIVVGSAQ-RFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDA 308 (450)
T ss_pred HHHHHhhcCCEEEEEechhHhhccCCcc--ccCCceEEecCc-ccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecC
Confidence 2222211 11100 1111000 123689988742 2332 12 7888887764433100
Q ss_pred --CCceec--------------c--CCCcHHHHH-HHHHHHHHH--hcChHHHHHHHHHHHHHHHhhccCC-CceeecCC
Q 013461 298 --SSGYVF--------------S--ASLPPYLAS-AAITAIDVL--EENPDLITKLKKNTAILRTGLSDIH-GLSIASNP 355 (442)
Q Consensus 298 --~~~~~~--------------s--~s~~p~~aa-aa~aal~~l--~~~~~~~~~l~~~~~~l~~~L~~~~-g~~~~~~~ 355 (442)
..+|.. + -+.+...+| ++....-++ +...++.++..++..++.++|++.. |+++...
T Consensus 309 ~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~- 387 (450)
T COG0403 309 AGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD- 387 (450)
T ss_pred CCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc-
Confidence 001110 0 001122111 111111111 1224567788888999999998652 5666532
Q ss_pred CCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 356 ESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 356 ~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
..|--+.+.-+ .....++..+.. ..|+-++.... ..+-+++.-..|++||+.+++++...
T Consensus 388 -~fFdt~~v~~~-------~~~~~~l~~~~~-~~G~~L~~~~~---------~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 388 -HFFDTFTVRVP-------EEVAEALLAAAI-AGGINLRRVDA---------DTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred -cceeeEEEecc-------hhHHHHHHHHHH-hcCCceeeecC---------CceEEEeecccCHHHHHHHHHHHhhh
Confidence 33323333211 012334455433 34887765433 24889999999999999999998764
No 380
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.20 E-value=0.002 Score=67.28 Aligned_cols=216 Identities=14% Similarity=0.145 Sum_probs=132.4
Q ss_pred ccccCcHHHHHHHHHHHhhhCCCc--EEEEcchHHHHHhhhhhhccC---------------------------------
Q 013461 148 GFYGTIDVHLDCEARIAKFLGTPD--SILYSYGLSTMFSAIPCFCKK--------------------------------- 192 (442)
Q Consensus 148 ~~~g~~~~~~~le~~lA~~~g~e~--~i~~~sG~~a~~~ai~a~~~~--------------------------------- 192 (442)
...++..+..++-+.+++++|.+. ..++++|+.||..++-+..+.
T Consensus 117 ~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~ 196 (608)
T TIGR03811 117 SSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMD 196 (608)
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccc
Confidence 344567777788888999999653 588999999988766332110
Q ss_pred -------------------C------CEEEeCCCchHHHHHHHHhcCC---eEEEecCC-----CHHHHHHHHHhhcccc
Q 013461 193 -------------------G------DLIVADEGVHWGIQNGLYLSRS---TVVYFKHN-----DMDSLRNTLERVTADN 239 (442)
Q Consensus 193 -------------------g------d~Vi~~~~~h~s~~~~~~l~g~---~v~~~~~~-----d~~~Le~~l~~~~~~~ 239 (442)
| -.++++...|.++.+++.+.|. .++.+|.+ |+++|++.+++.....
T Consensus 197 l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g 276 (608)
T TIGR03811 197 LLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEK 276 (608)
T ss_pred cccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcC
Confidence 0 0588889999999999998886 46666643 7889999887642211
Q ss_pred -cc-----------------------------ccccc--cc--ccCCCcc----cc------------------------
Q 013461 240 -KR-----------------------------SNSFG--VL--GRSGRGL----TE------------------------ 257 (442)
Q Consensus 240 -~~-----------------------------a~~~g--~~--G~~g~g~----~~------------------------ 257 (442)
+. .+++. +. +.-|... .+
T Consensus 277 ~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~ 356 (608)
T TIGR03811 277 TPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEK 356 (608)
T ss_pred CCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccc
Confidence 10 12221 11 1111100 00
Q ss_pred -----------ccCCCCCceeEEEEeccccccCC---CcEEEcCHHhHHHHHhhCCceec---------------cCCCc
Q 013461 258 -----------HCGVPVDKIDIVTAAMGHALATE---GGFCTGSARVVDHQRLSSSGYVF---------------SASLP 308 (442)
Q Consensus 258 -----------~~~v~~~~~diii~S~sK~lg~~---GG~v~g~~~~i~~l~~~~~~~~~---------------s~s~~ 308 (442)
.-++ ..+|=++..++|.+..+ |++++-++.+.+.+... ..|.+ .++-+
T Consensus 357 ~~~l~~~~~~~l~gl--e~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~-a~Yl~~~~~~~p~~~g~~~legSR~ 433 (608)
T TIGR03811 357 KEYISREVYNAYKAI--SEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYF-ATYVFEKGADIPALLGAYILEGSKA 433 (608)
T ss_pred cccccHhHHHHHhcC--cCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcC-cchhccccccCcccccccceecCCc
Confidence 0022 35688888999998643 45677777665555332 23332 22223
Q ss_pred HHHHHHHHHHHHHHh----cChHHHHHHHHHHHHHHHhhccC------CCcee--ecCCCCCEEEEEecC
Q 013461 309 PYLASAAITAIDVLE----ENPDLITKLKKNTAILRTGLSDI------HGLSI--ASNPESPIVFLILEK 366 (442)
Q Consensus 309 p~~aaaa~aal~~l~----~~~~~~~~l~~~~~~l~~~L~~~------~g~~~--~~~~~~~i~~~~~~~ 366 (442)
...+++...+++.+. ...++.++..++++++.+.|.+. +.+++ ..+++.+++.+.+..
T Consensus 434 ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~ 503 (608)
T TIGR03811 434 GATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNE 503 (608)
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEec
Confidence 333455556777662 23467788888899999998773 34554 446778888888743
No 381
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.84 E-value=0.001 Score=71.77 Aligned_cols=251 Identities=14% Similarity=0.132 Sum_probs=133.3
Q ss_pred ccccCcHHHHHHHHHHHhhhCCC--cEEEEcchHHHHHhhhhhh--c-cCCCEEEeCCCchHHHHHHHH----hcCCeEE
Q 013461 148 GFYGTIDVHLDCEARIAKFLGTP--DSILYSYGLSTMFSAIPCF--C-KKGDLIVADEGVHWGIQNGLY----LSRSTVV 218 (442)
Q Consensus 148 ~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG~~a~~~ai~a~--~-~~gd~Vi~~~~~h~s~~~~~~----l~g~~v~ 218 (442)
...|+.+...++...+++++|.+ .+=++-.++.+-++++.+. . ++...|++++..|+.+...++ ..|.+++
T Consensus 118 isQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~ 197 (954)
T PRK12566 118 IAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELV 197 (954)
T ss_pred hhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEE
Confidence 34577788889999999999988 5566777765444433332 2 235679999999998776443 2333433
Q ss_pred E-----------------ecC--CCHHHHHHHHHhhccccccccccccc---ccCCC--ccccccCCCCCceeEEEEecc
Q 013461 219 Y-----------------FKH--NDMDSLRNTLERVTADNKRSNSFGVL---GRSGR--GLTEHCGVPVDKIDIVTAAMG 274 (442)
Q Consensus 219 ~-----------------~~~--~d~~~Le~~l~~~~~~~~~a~~~g~~---G~~g~--g~~~~~~v~~~~~diii~S~s 274 (442)
. +|. ..++|++++.+. +|.-|.+ +.+.. ++....| ..+.||++|+ +
T Consensus 198 ~~~~~~~~~~~~~~v~vq~P~~~G~i~d~~~i~~~-------~h~~gal~~~~~d~laL~ll~~Pg--e~GADI~vG~-~ 267 (954)
T PRK12566 198 VDAVDNLAAHAVFGALLQYPDTHGEIRDLRPLIDQ-------LHGQQALACVAADLLSLLVLTPPG--ELGADVVLGS-T 267 (954)
T ss_pred EcchhhcCCCCEEEEEEECCCCceEEccHHHHHHH-------HHHcCCEEEEEeCHHHHhCCCChh--hcCCcEEeeC-C
Confidence 2 110 012222222222 2222211 11000 0111011 1236888774 4
Q ss_pred ccccC----CC---cEEEcCHHhHHHHHh----------hCCceecc------------CC----CcHHHHHHHHHHHHH
Q 013461 275 HALAT----EG---GFCTGSARVVDHQRL----------SSSGYVFS------------AS----LPPYLASAAITAIDV 321 (442)
Q Consensus 275 K~lg~----~G---G~v~g~~~~i~~l~~----------~~~~~~~s------------~s----~~p~~aaaa~aal~~ 321 (442)
+.||. +| ||++.+++++..+-- ...+|..+ ++ .+...+|. .+++-.
T Consensus 268 Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~-~a~~Y~ 346 (954)
T PRK12566 268 QRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLAN-IAGFYA 346 (954)
T ss_pred CcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHH-HHHHHH
Confidence 55542 22 888888876555410 00111110 00 11222211 112211
Q ss_pred HhcC----hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEE-EEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeec
Q 013461 322 LEEN----PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIV-FLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTS 396 (442)
Q Consensus 322 l~~~----~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~ 396 (442)
.-.. .++.++...+..++.+.|.+ .|+++... ++| -+.+.- +. ...++.+++++ .||-++..
T Consensus 347 ~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~---~fF~~~~v~~--~~------~~~~~~~~a~~-~~~n~r~~ 413 (954)
T PRK12566 347 VYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNR---HFFDTLTLEV--GG------AQAAIIESAEA-ARINLRIL 413 (954)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccC---CccceEEEEc--cC------CHHHHHHHHHH-CCCeeEEe
Confidence 1112 34455677788899999988 49887532 332 222321 10 13356666665 48888764
Q ss_pred cCcccccCCCCCceEEEecCCCCHHHHHHHHHHHH
Q 013461 397 KRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 397 ~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
.. ..+.|++.-.+|++|++.+++++.
T Consensus 414 ~~---------~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 414 GR---------GRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CC---------CeEEEEeCCCCCHHHHHHHHHHhc
Confidence 32 238999999999999999999984
No 382
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.78 E-value=0.0016 Score=61.67 Aligned_cols=253 Identities=15% Similarity=0.163 Sum_probs=122.0
Q ss_pred HHHHHHHHHHhhh---C----CCcEEEEcchH-HHHHhhhhhhccC------CCEEEeCCCchHHHHHHHHhcCCeEEEe
Q 013461 155 VHLDCEARIAKFL---G----TPDSILYSYGL-STMFSAIPCFCKK------GDLIVADEGVHWGIQNGLYLSRSTVVYF 220 (442)
Q Consensus 155 ~~~~le~~lA~~~---g----~e~~i~~~sG~-~a~~~ai~a~~~~------gd~Vi~~~~~h~s~~~~~~l~g~~v~~~ 220 (442)
+..+|++.|-++. | .++-|++.+|+ +.+.+++-++... --.|+...|+|.++......-....+.+
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 3467777777665 3 24678887776 6667777666422 2258899999988776544333222221
Q ss_pred c---------------------CCCHHH-HHHHHHhhcccccccccccccccCCCcccccc-CCC-CCceeEEEEecccc
Q 013461 221 K---------------------HNDMDS-LRNTLERVTADNKRSNSFGVLGRSGRGLTEHC-GVP-VDKIDIVTAAMGHA 276 (442)
Q Consensus 221 ~---------------------~~d~~~-Le~~l~~~~~~~~~a~~~g~~G~~g~g~~~~~-~v~-~~~~diii~S~sK~ 276 (442)
. .|++|- +.+.+-+. ...+.-|..-.+- .|| .++ |.|-||++.|+||.
T Consensus 124 ~Gda~~~~~~~~~~~~IElVTSPNNPDG~lr~~V~~g-~~~k~I~D~AYYW-------PhyTpI~~~aD~DiMLFT~SK~ 195 (363)
T PF04864_consen 124 AGDASNFKNSDNPSPYIELVTSPNNPDGQLREAVLNG-SSGKVIHDLAYYW-------PHYTPITAPADHDIMLFTLSKL 195 (363)
T ss_dssp EEECCCGTT-S-CCGEEEEEESS-TTT------SSTT-TEEEEEEE-TT-S-------TTTS---S-B--SEEEEEHHHH
T ss_pred cccHHhhccCCCCCCeEEEEeCCCCCcccccchhcCC-CCcceeeeeeeec-------ccccccCCCCCCceEEEEEecc
Confidence 1 122331 11110000 0000011111111 122 221 45669999999999
Q ss_pred ccCCC---cEEEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHhc-C----------hHHHHHHHHHHHHHHH
Q 013461 277 LATEG---GFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEE-N----------PDLITKLKKNTAILRT 341 (442)
Q Consensus 277 lg~~G---G~v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~~-~----------~~~~~~l~~~~~~l~~ 341 (442)
-|-.| ||.+.+ +++.+.+.....- -+.+.+-=...-++.-|+.+-+ . .--.+.++++-++|++
T Consensus 196 TGHAGSR~GWAlVKD~~Va~kM~~y~~l--nTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~ 273 (363)
T PF04864_consen 196 TGHAGSRFGWALVKDEEVAKKMTKYMEL--NTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRA 273 (363)
T ss_dssp CS-GGG-EEEEEES-HHHHHHHHHHHHH--HCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred cCccccccceeeecCHHHHHHHHHHHHH--hcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHH
Confidence 98766 886665 4444444322100 0111121111112222222211 1 1124567778888888
Q ss_pred hhccCCCceeec-------------CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 342 GLSDIHGLSIAS-------------NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 342 ~L~~~~g~~~~~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
.+..-.-+.+.. .+...+.|+...... ..| |...|++.||..+.+..+..+ +.
T Consensus 274 ~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee---d~D-------C~~~l~~~~I~tr~G~~fga~----~r 339 (363)
T PF04864_consen 274 AVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE---DED-------CYAVLREAKIITRSGVLFGAD----SR 339 (363)
T ss_dssp HHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG---GSS-------HHHHHHCTTEEEEEGGGGTS-----TT
T ss_pred HHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc---ccc-------HHHHHHhCCcccCCCCccCCC----CC
Confidence 886542232211 123457788875321 012 445688889999888776542 23
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHH
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRI 433 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~ 433 (442)
.+|||+- .++++.+.++++|...
T Consensus 340 yVRlSml--~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 340 YVRLSML--KRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEESS--S-HHHHHHHHHHHHCC
T ss_pred eEEEecc--CCHHHHHHHHHHHHhh
Confidence 4999987 5899999999998753
No 383
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.70 E-value=0.024 Score=54.32 Aligned_cols=158 Identities=15% Similarity=0.156 Sum_probs=101.2
Q ss_pred CCCCceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCc------------eeccCCCcHHHHHHHHHHHHHHhcC--
Q 013461 261 VPVDKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSG------------YVFSASLPPYLASAAITAIDVLEEN-- 325 (442)
Q Consensus 261 v~~~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~------------~~~s~s~~p~~aaaa~aal~~l~~~-- 325 (442)
++..+.|++.++.-|.+|..| +.++.+++++++......+ .++.+ +|.++......+++.++..
T Consensus 186 iDvsk~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNT-Pptfa~y~~~lv~~Wlk~~GG 264 (365)
T COG1932 186 IDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNT-PPTFAWYLLGLVFKWLKSQGG 264 (365)
T ss_pred CChhHcceEEEehhhccCccceEEEEEcHHHHhcccccCCchHhhchhhhccCCccCC-cHHHHHHHHHHHHHHHHHcCC
Confidence 334567899999999999877 7788899988877543111 12222 2333344444677777743
Q ss_pred -hHHHHHHHHHHHHHHHhhccCCCce---eecCCCCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcc
Q 013461 326 -PDLITKLKKNTAILRTGLSDIHGLS---IASNPESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSM 400 (442)
Q Consensus 326 -~~~~~~l~~~~~~l~~~L~~~~g~~---~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~ 400 (442)
+.+.++-+++.+.|.+.+.+- ++- +.....|. -+.+.+. +..+...++.++.++ |+..-.++.
T Consensus 265 l~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~--------~~~ld~~fv~eae~~-gl~~lkGhr-- 332 (365)
T COG1932 265 LEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLV--------DAELDKGFVAEAEAA-GLIYLKGHR-- 332 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcC--------cHHHHHHHHHHHHHc-CCceecccc--
Confidence 567778888899999998875 432 11112232 2344442 223345677765544 655444322
Q ss_pred cccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 401 LDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 401 ~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.++++|+++...+..|+++.+++-++.+.++
T Consensus 333 -----~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 333 -----SVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred -----CCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 2466999999999999999999998887654
No 384
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.59 E-value=0.015 Score=56.62 Aligned_cols=263 Identities=12% Similarity=0.119 Sum_probs=128.5
Q ss_pred HHHHHhhhCC---CcEEEEcchH-HHHHhhhhhhc--cCCCEEEeCCCchHHHHHHHHhcCCeEEEecC---C-----CH
Q 013461 160 EARIAKFLGT---PDSILYSYGL-STMFSAIPCFC--KKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH---N-----DM 225 (442)
Q Consensus 160 e~~lA~~~g~---e~~i~~~sG~-~a~~~ai~a~~--~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~---~-----d~ 225 (442)
...+-+..|. ..+++..-.+ .++...+.++. ..++.|+.+..-|-+-..++...|.+++.++. . |.
T Consensus 62 ~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~ 141 (389)
T PF05889_consen 62 VLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDL 141 (389)
T ss_dssp HHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHH
T ss_pred HHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccH
Confidence 3334445564 4567775544 33444444443 67899999999999999999999998887763 2 57
Q ss_pred HHHHHHHHhhcccccc-----------------------cccccccccCCCccccccCCC-------------CCceeEE
Q 013461 226 DSLRNTLERVTADNKR-----------------------SNSFGVLGRSGRGLTEHCGVP-------------VDKIDIV 269 (442)
Q Consensus 226 ~~Le~~l~~~~~~~~~-----------------------a~~~g~~G~~g~g~~~~~~v~-------------~~~~dii 269 (442)
+++|+.+++..+.... ++..++- .=+-..||++ ...+|+.
T Consensus 142 ~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IP----hlvNnAYgvQ~~~~~~~i~~a~~~GRvda~ 217 (389)
T PF05889_consen 142 EAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIP----HLVNNAYGVQSSKCMHLIQQAWRVGRVDAF 217 (389)
T ss_dssp HHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT------EEEEGTTTTT-HHHHHHHHHHHHHSTCSEE
T ss_pred HHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCc----eEEccchhhhHHHHHHHHHHHHhcCCccee
Confidence 7888888776544221 1111110 0000123431 0246888
Q ss_pred EEeccccc--cCCCcEEEcC-HHhHHHHHhhCCceeccCCCcHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHhhc
Q 013461 270 TAAMGHAL--ATEGGFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE--ENPDLITKLKKNTAILRTGLS 344 (442)
Q Consensus 270 i~S~sK~l--g~~GG~v~g~-~~~i~~l~~~~~~~~~s~s~~p~~aaaa~aal~~l~--~~~~~~~~l~~~~~~l~~~L~ 344 (442)
+.|..|-| +++|+.++++ +..++.+...-.+ -++..|..- . ...|..+- ....++.+..+...++.+.|+
T Consensus 218 vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpG---Ras~sp~ld-~-~itLl~LG~~g~~~ll~~r~~~f~~l~erl~ 292 (389)
T PF05889_consen 218 VQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPG---RASASPSLD-L-FITLLSLGCTGYGALLKERKASFPYLKERLK 292 (389)
T ss_dssp EEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHS---HBTSHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCEEecCCCcEEEecCHHHHHHHHHHhhh---hhhcccchH-H-HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988 4445555554 4566666433211 122233321 1 11121111 112344444445555555554
Q ss_pred cC---CCceeecCCCCCE-EEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEee----ccCccc-c-cCCCCCceEEEe
Q 013461 345 DI---HGLSIASNPESPI-VFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVT----SKRSML-D-KCRLPVGIRLFV 414 (442)
Q Consensus 345 ~~---~g~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~----~~~~~~-~-~~~~~~~iRi~~ 414 (442)
+. -+-.+...|..|+ +.+.+..-..... .....+... |..+||.=.+ ...... . ...+-+.+-++.
T Consensus 293 ~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~---k~~~~lgs~-Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As 368 (389)
T PF05889_consen 293 KWAEEVGERLLETPRNHISMAFTLDTLYEISQ---KDGTFLGSM-LFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS 368 (389)
T ss_dssp HHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCS---SHHHHHHHH-HHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE
T ss_pred HHHHHhhhhhcCCCCCCeeEEEECccchhhcc---chhhhHHHH-HHhCCcccceeeccCCCcccccCCCCchHHHHHHH
Confidence 32 1333333344453 3333322111111 112345554 5555664222 111110 0 011125589988
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 013461 415 SAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 415 ~~~~t~eei~~~i~~l~~~~~ 435 (442)
..++|+||+|.++++|+++++
T Consensus 369 aiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 369 AIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp -TT--HHHHHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHHhC
Confidence 999999999999999999864
No 385
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.45 E-value=0.0038 Score=57.79 Aligned_cols=50 Identities=20% Similarity=0.214 Sum_probs=41.3
Q ss_pred cccCcH-HHHHHHHHHHhhhCCCcEEE---EcchHHHHHhhhhhhccCCCEEEe
Q 013461 149 FYGTID-VHLDCEARIAKFLGTPDSIL---YSYGLSTMFSAIPCFCKKGDLIVA 198 (442)
Q Consensus 149 ~~g~~~-~~~~le~~lA~~~g~e~~i~---~~sG~~a~~~ai~a~~~~gd~Vi~ 198 (442)
.||..| .++.|++-.|+.+|.|.+++ +-||++|+..++-.+++|||+.+.
T Consensus 59 GYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~ 112 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLY 112 (416)
T ss_pred CCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEE
Confidence 355544 46789999999999998865 568999999999999999998653
No 386
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.39 E-value=0.12 Score=48.29 Aligned_cols=306 Identities=17% Similarity=0.169 Sum_probs=149.0
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcC------CCCCccCccccCcHHHHHHHHHHHhhhCCC--cEEEEcch
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYG------VGSCGPRGFYGTIDVHLDCEARIAKFLGTP--DSILYSYG 178 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g------~~~~~~~~~~g~~~~~~~le~~lA~~~g~e--~~i~~~sG 178 (442)
+.+..|-|++|. ||+. +....+.+.+.++++. .-.+--+...+ -+-.-..++...|.. ++-+.++=
T Consensus 64 ~d~~~iYlcGNS-LGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~----De~il~l~~~iVGA~e~EvavmNsL 137 (465)
T KOG3846|consen 64 DDKPVIYLCGNS-LGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSI----DEPILPLLAPIVGAQENEVAVMNSL 137 (465)
T ss_pred CCCCeEEEeccc-cccC-chhhHhHHHHHHHHHHhhhhhcccccccceeec----chhhhhhhhhhccCCchhhhhHhhh
Confidence 556778788766 8886 4456677777777642 21111111111 133445667777853 44555555
Q ss_pred HHHHHhhhhhhccCCC---EEEeC----CCchHHHHHHHHhcCCeE----EEecC-C-----CHHHHHHHHHhhcccccc
Q 013461 179 LSTMFSAIPCFCKKGD---LIVAD----EGVHWGIQNGLYLSRSTV----VYFKH-N-----DMDSLRNTLERVTADNKR 241 (442)
Q Consensus 179 ~~a~~~ai~a~~~~gd---~Vi~~----~~~h~s~~~~~~l~g~~v----~~~~~-~-----d~~~Le~~l~~~~~~~~~ 241 (442)
+.-+.+.+-.|-+|.. .|+.. ..-|.++..-+++.|..+ +.+.. . -.+|+-+.+++..++.+.
T Consensus 138 TvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~ 217 (465)
T KOG3846|consen 138 TVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIAL 217 (465)
T ss_pred hhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEE
Confidence 5555555666665543 25544 334667777788877653 12211 1 133444444444433222
Q ss_pred ------------ccccccccc--------CCCcccccc-CCC----CCceeEEEEecccccc----CCCcEEEcCHHhHH
Q 013461 242 ------------SNSFGVLGR--------SGRGLTEHC-GVP----VDKIDIVTAAMGHALA----TEGGFCTGSARVVD 292 (442)
Q Consensus 242 ------------a~~~g~~G~--------~g~g~~~~~-~v~----~~~~diii~S~sK~lg----~~GG~v~g~~~~i~ 292 (442)
-..+|.+-. -|.-++... +|+ ..++|+-+=+--|.+. +.||..+-.+..-+
T Consensus 218 v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~ 297 (465)
T KOG3846|consen 218 VCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKE 297 (465)
T ss_pred EEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcc
Confidence 000111100 011111111 111 2457777766677773 22354332222111
Q ss_pred HHH---------------------hhCCceeccCCCcHHHHH-HHHHHHHHHhcC--hHHHHHHHHHHHHHHHhhccCCC
Q 013461 293 HQR---------------------LSSSGYVFSASLPPYLAS-AAITAIDVLEEN--PDLITKLKKNTAILRTGLSDIHG 348 (442)
Q Consensus 293 ~l~---------------------~~~~~~~~s~s~~p~~aa-aa~aal~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g 348 (442)
... .......|..|.||+... +...+|++.++. ++++.+.--+..|+...++...|
T Consensus 298 ~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g 377 (465)
T KOG3846|consen 298 SLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKG 377 (465)
T ss_pred hhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcc
Confidence 110 000111234445666544 444778877643 23333333334444443333222
Q ss_pred ce-----------eec----CCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEE
Q 013461 349 LS-----------IAS----NPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 413 (442)
Q Consensus 349 ~~-----------~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~ 413 (442)
.+ +.. +..+.-+.+.+..+. ..+.+. |.++|+.+-.. + |+.||++
T Consensus 378 ~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~----------~~vfqe-L~krGv~~DkR-~--------PNvIRvA 437 (465)
T KOG3846|consen 378 YKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT----------PKVFQE-LHKRGVIGDKR-R--------PNVIRVA 437 (465)
T ss_pred cCchhhhcceeEEEeCCcccccccceEEEEeCCCc----------hHHHHH-HHHcCeecccc-C--------CCceEee
Confidence 21 111 112333444443221 245664 66679865432 2 4569996
Q ss_pred e-cCCCCHHHHHHHHHHHHHHHHHHh
Q 013461 414 V-SAAHSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 414 ~-~~~~t~eei~~~i~~l~~~~~~~~ 438 (442)
+ +..+|-.|+-+++++|.+++..+-
T Consensus 438 PvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 438 PVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred cchhhccHHHHHHHHHHHHHHHHHhh
Confidence 5 568999999999999999887654
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.04 E-value=0.025 Score=57.70 Aligned_cols=272 Identities=15% Similarity=0.140 Sum_probs=147.3
Q ss_pred cCcHHHHHHHHHHHhhhCCCcEEE-EcchHH---HHHhhhhhhc-cCCC----EEEeCCCchHHHHHHHHhcCCeEEEec
Q 013461 151 GTIDVHLDCEARIAKFLGTPDSIL-YSYGLS---TMFSAIPCFC-KKGD----LIVADEGVHWGIQNGLYLSRSTVVYFK 221 (442)
Q Consensus 151 g~~~~~~~le~~lA~~~g~e~~i~-~~sG~~---a~~~ai~a~~-~~gd----~Vi~~~~~h~s~~~~~~l~g~~v~~~~ 221 (442)
|...+..+||+.|++..|.+..-+ -++|.+ |-..+|+++. .+|+ +-+++-..|+.--..+.+.|-+++++.
T Consensus 579 GY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVG 658 (1001)
T ss_pred hHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEee
Confidence 446777899999999999887644 566653 4456777774 3333 567888888877777888999988876
Q ss_pred C-----CCHHHHHHHHHhhcccccc-----ccccccccc------------------CC------CccccccCCCCCcee
Q 013461 222 H-----NDMDSLRNTLERVTADNKR-----SNSFGVLGR------------------SG------RGLTEHCGVPVDKID 267 (442)
Q Consensus 222 ~-----~d~~~Le~~l~~~~~~~~~-----a~~~g~~G~------------------~g------~g~~~~~~v~~~~~d 267 (442)
. .|+.+|+...+++.++... -.-+|++.+ +| .|++..-+ -..|
T Consensus 659 ~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd---~GaD 735 (1001)
T KOG2040|consen 659 CDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGD---IGAD 735 (1001)
T ss_pred ccCCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcc---cccc
Confidence 3 2788999888877655332 111222211 11 12322111 1246
Q ss_pred EEEEeccccccC---CC----cEEEcCHHhHHHHHhh---------CCceeccCCCcHHH----HHHHHHHHHHHhc--C
Q 013461 268 IVTAAMGHALAT---EG----GFCTGSARVVDHQRLS---------SSGYVFSASLPPYL----ASAAITAIDVLEE--N 325 (442)
Q Consensus 268 iii~S~sK~lg~---~G----G~v~g~~~~i~~l~~~---------~~~~~~s~s~~p~~----aaaa~aal~~l~~--~ 325 (442)
+.=--++|+|+. +| |=+..++.+..++-.. ...-+-+.+..|+. .....+-+++|-. .
T Consensus 736 V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL 815 (1001)
T KOG2040|consen 736 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGL 815 (1001)
T ss_pred ceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhccccc
Confidence 777778999952 12 2233344443333211 00001111112221 1222334555532 1
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEE---EEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccc
Q 013461 326 PDLITKLKKNTAILRTGLSDIHGLSIASNPESPIVF---LILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLD 402 (442)
Q Consensus 326 ~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~ 402 (442)
++.-+-..-|..|+.+.|+..-.+-+. ...+.+-+ +.+..-.. ...-.+.++++++ .+.|+....-+.|
T Consensus 816 ~~as~~AiLNaNYMakRLe~hYkil~~-~~~~~vaHEFIlD~r~fK~---~agieavDvAKRL-~DYgFHaPTmswP--- 887 (1001)
T KOG2040|consen 816 KDASKIAILNANYMAKRLESHYKILFR-GENGLVAHEFILDLRPFKK---TAGIEAVDVAKRL-MDYGFHAPTMSWP--- 887 (1001)
T ss_pred chhhHHHhhhhHHHHHHHhhccceeEe-cCCcceeeeeeeechhhcc---ccCCcHHHHHHHH-HhccCCCCccccc---
Confidence 222233344677888888764222222 22332211 22211110 0111245788874 4568764433332
Q ss_pred cCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHH
Q 013461 403 KCRLPVGIRLFVSAAHSEADLVKACESLKRISAV 436 (442)
Q Consensus 403 ~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~ 436 (442)
.+..+-|-++-.-+.+|+|++++++-.+-++
T Consensus 888 ---V~gtLMIEPTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 888 ---VAGTLMIEPTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred ---cCCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence 2456899999888999999999998766544
No 388
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.92 E-value=0.0034 Score=53.64 Aligned_cols=54 Identities=13% Similarity=0.082 Sum_probs=40.3
Q ss_pred cCcHHHHHHHHHHHhhhC--C----CcEEEEcchHHHHHhhhhhhccCCCEEEeCCCchH
Q 013461 151 GTIDVHLDCEARIAKFLG--T----PDSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHW 204 (442)
Q Consensus 151 g~~~~~~~le~~lA~~~g--~----e~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~ 204 (442)
|..++++.+.+.+.+.+| . +++++++++++++..++.+++++||.|+++.++|.
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 455555555555555545 1 35666667779999999999999999999999875
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=96.63 E-value=0.072 Score=49.83 Aligned_cols=146 Identities=13% Similarity=0.159 Sum_probs=77.7
Q ss_pred eEEEEeccccccCCC---c---EEEcCHHhHHHHHhhCC-ceeccCCCc-HHHHHHHHHHHHHHh---c----ChHHHHH
Q 013461 267 DIVTAAMGHALATEG---G---FCTGSARVVDHQRLSSS-GYVFSASLP-PYLASAAITAIDVLE---E----NPDLITK 331 (442)
Q Consensus 267 diii~S~sK~lg~~G---G---~v~g~~~~i~~l~~~~~-~~~~s~s~~-p~~aaaa~aal~~l~---~----~~~~~~~ 331 (442)
-+++.||+|-+|.-+ | +++-++..+..+..... --.-..+.| .+.+....+.|+--+ + ...+-.+
T Consensus 245 ~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssR 324 (410)
T KOG1412|consen 245 LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSR 324 (410)
T ss_pred EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 488999999999643 3 34445555443321110 000111223 333333333332211 1 1234456
Q ss_pred HHHHHHHHHHhhccC--CC-ceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCC
Q 013461 332 LKKNTAILRTGLSDI--HG-LSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPV 408 (442)
Q Consensus 332 l~~~~~~l~~~L~~~--~g-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~ 408 (442)
+++++..|++.|..+ || +.-. ..+..++.+. |- ...-++.+.+++.|++.+.
T Consensus 325 I~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyT-----GL-------tp~qV~~li~~h~vyLl~~------------ 379 (410)
T KOG1412|consen 325 IKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYT-----GL-------TPAQVDHLIENHKVYLLSD------------ 379 (410)
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHH-Hhhccceeec-----CC-------CHHHHHHHHHhceEEEecC------------
Confidence 677777777777665 33 1111 1234444432 10 1123566677778887643
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
=||+++. .+...+|..+++|.++++.+.+
T Consensus 380 -GRInisG-LN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 380 -GRINISG-LNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred -CcEeeec-cccccHHHHHHHHHHHHHhhcc
Confidence 3677764 5678899999999998877643
No 390
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=94.54 E-value=0.38 Score=45.80 Aligned_cols=49 Identities=10% Similarity=-0.025 Sum_probs=33.5
Q ss_pred cchHHHH--HhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCC
Q 013461 176 SYGLSTM--FSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHND 224 (442)
Q Consensus 176 ~sG~~a~--~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d 224 (442)
-||+.|+ .+.+.+..-++..|.++.|+++...+.....|..+..|++-|
T Consensus 127 lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd 177 (427)
T KOG1411|consen 127 LSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYD 177 (427)
T ss_pred ccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecc
Confidence 3565544 333444445688899999998887777888888776666543
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=93.96 E-value=1.9 Score=44.70 Aligned_cols=84 Identities=18% Similarity=0.209 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCC
Q 013461 327 DLITKLKKNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRL 406 (442)
Q Consensus 327 ~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~ 406 (442)
++.+++....-.|..+|+.. |.++... ..|=.+.+. .+. .+.++.++++++ +|-++-...
T Consensus 395 ~IArrvh~~T~~l~~~l~~a-ghel~~k--~fFDTLkI~--~~~------s~~~~l~rA~~~-~iNlr~~ed-------- 454 (1001)
T KOG2040|consen 395 EIARRVHNLTLILAEGLKNA-GHELQHK--PFFDTLKIR--CGC------SAEEVLDRAAKR-QINLRLVED-------- 454 (1001)
T ss_pred HHHHHHHHHHHHHHHHHhhc-chhhccc--cccceEEEE--ecC------cHHHHHHHHHhh-cCceEEeec--------
Confidence 45556666677778888775 6665432 222122221 111 133566666665 565543221
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHH
Q 013461 407 PVGIRLFVSAAHSEADLVKACESLK 431 (442)
Q Consensus 407 ~~~iRi~~~~~~t~eei~~~i~~l~ 431 (442)
..|-+++--+.+++|++.++.++.
T Consensus 455 -~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 455 -GTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred -CceEEeecccccHHHHHHHHHHHc
Confidence 238889998999999999999886
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=87.48 E-value=15 Score=34.04 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=26.2
Q ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 410 IRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 410 iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
+.+..+.++++.|+|+++.+|.+.++.+.++
T Consensus 376 ln~a~aigm~~hdld~~~~rl~~~~a~~~ke 406 (432)
T KOG3843|consen 376 LNAACAIGMKDHDLDEFFNRLDRCLAAFRKE 406 (432)
T ss_pred hhHHHhcCCcHhHHHHHHHHHHHHHHHHHHH
Confidence 7777888899999999999999988776543
No 393
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=84.13 E-value=50 Score=33.27 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=60.5
Q ss_pred HHHHHHHHhhccCCCceeecCCCCCEEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCcccccCCCCCceEEE
Q 013461 334 KNTAILRTGLSDIHGLSIASNPESPIVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLF 413 (442)
Q Consensus 334 ~~~~~l~~~L~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~ 413 (442)
++.+.+.+.+.+-+.|++..+..-.++.+++++. .....++.+++-....|.+.+...-. + --||++
T Consensus 381 ~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~-------N~~ne~Ll~~in~~g~i~l~~~~l~g--k----~vlRf~ 447 (511)
T KOG0628|consen 381 RLAKEFETLVRADPRFEIVNKRILGLVCFRLKGD-------NEINEALLNRLNSSGRIHLVPASLHG--K----FVLRFA 447 (511)
T ss_pred HHHHHHHHHhhcCCcceeecccccceeEEeecCC-------cHHHHHHHHHHHhcCcEEEEEeeecc--e----EEEEEE
Confidence 3455555555555568887666667788887543 22344666665555678777654311 1 129999
Q ss_pred ecCCC-CHHHHHHHHHHHHHHHHHHhh
Q 013461 414 VSAAH-SEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 414 ~~~~~-t~eei~~~i~~l~~~~~~~~~ 439 (442)
++... +++|+++.-+.|.+....++.
T Consensus 448 V~s~~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628|consen 448 VCSPLTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred ecCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 98764 578999999999888777543
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=72.85 E-value=34 Score=32.17 Aligned_cols=154 Identities=16% Similarity=0.163 Sum_probs=83.0
Q ss_pred CceeEEEEeccccccCCC-cEEEcCHHhHHHHHhhCCcee------------ccCCCcHHHHHHHHHHHHHHhcC---hH
Q 013461 264 DKIDIVTAAMGHALATEG-GFCTGSARVVDHQRLSSSGYV------------FSASLPPYLASAAITAIDVLEEN---PD 327 (442)
Q Consensus 264 ~~~diii~S~sK~lg~~G-G~v~g~~~~i~~l~~~~~~~~------------~s~s~~p~~aaaa~aal~~l~~~---~~ 327 (442)
.+.+++....-|.+|..| -.++.+++++....... +.+ +.+ +|-+...+.--.++++.+. ..
T Consensus 194 sk~gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~t-P~v~dyk~~~~NnSlyNT-pP~f~iy~~~Lv~~~il~~GGl~a 271 (370)
T KOG2790|consen 194 SKFGVIFAGAQKNVGPAGVTVVIVRKDLLGNALDIT-PSVLDYKIMDKNNSLYNT-PPCFGIYVMGLVFEWILEKGGLAA 271 (370)
T ss_pred hhcceEEeccccccCccccEEEEEehhhhcccccCC-ccccceeeeccccccccC-CCeeeeeehhhHHHHHHhcccHHH
Confidence 344567777778888766 23445555554332211 111 111 2222222222345555532 33
Q ss_pred HHHHHHHHHHHHHHhhccCCCceeec-CC--CCC-EEEEEecCCCCCchhhHHHHHHHHHHHHHhCCEEEeeccCccccc
Q 013461 328 LITKLKKNTAILRTGLSDIHGLSIAS-NP--ESP-IVFLILEKSTGSMKNDLQLLEDIADWALKEDGVFVVTSKRSMLDK 403 (442)
Q Consensus 328 ~~~~l~~~~~~l~~~L~~~~g~~~~~-~~--~~~-i~~~~~~~~~~~~~~~~~~~~~i~~~~L~~~GV~v~~~~~~~~~~ 403 (442)
+.+.-.++.+.+.+.+.+..|+-..+ ++ .|- =+.++++++ .+-.++..++.+++=+.+...+.
T Consensus 272 ~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d--------~Le~eFLkeA~~~~mv~LKGhRS----- 338 (370)
T KOG2790|consen 272 MEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKD--------ELEAEFLKEAAKEHMVQLKGHRS----- 338 (370)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecch--------HHHHHHHHHHHHhhhhccccccc-----
Confidence 44555667888999998765764432 11 121 244555321 12234555556554333322221
Q ss_pred CCCCCceEEEecCCCCHHHHHHHHHHHHHHHH
Q 013461 404 CRLPVGIRLFVSAAHSEADLVKACESLKRISA 435 (442)
Q Consensus 404 ~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~ 435 (442)
-.+||-|+--.+|-++.+++++-++++.+
T Consensus 339 ---VGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 339 ---VGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred ---cccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 14599999999999999999998888754
No 395
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=53.80 E-value=26 Score=26.02 Aligned_cols=47 Identities=17% Similarity=0.223 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhhCCCcEEEEcchHH-HHHhhhhhhccCCCEEEeCCCc
Q 013461 156 HLDCEARIAKFLGTPDSILYSYGLS-TMFSAIPCFCKKGDLIVADEGV 202 (442)
Q Consensus 156 ~~~le~~lA~~~g~e~~i~~~sG~~-a~~~ai~a~~~~gd~Vi~~~~~ 202 (442)
.++|++.|.+.+|.+.-+-++|+.. .....+.-+.+||+++..++..
T Consensus 22 ~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rgKfi~~~~g~ 69 (78)
T PF10678_consen 22 KEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERGKFIPSDDGF 69 (78)
T ss_pred HHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcCCEeecCCCE
Confidence 4789999999999888877777652 3344455667899988877654
No 396
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=49.56 E-value=33 Score=25.32 Aligned_cols=47 Identities=21% Similarity=0.219 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhhCCCcEEEEcchHH-HHHhhhhhhccCCCEEEeCCCc
Q 013461 156 HLDCEARIAKFLGTPDSILYSYGLS-TMFSAIPCFCKKGDLIVADEGV 202 (442)
Q Consensus 156 ~~~le~~lA~~~g~e~~i~~~sG~~-a~~~ai~a~~~~gd~Vi~~~~~ 202 (442)
..+|++.|.+.+|.+..+-++|... .....+.-+.++|++|-.++..
T Consensus 20 ~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~kgKfi~~~~gf 67 (77)
T TIGR03853 20 RESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKKGKFIESDGGF 67 (77)
T ss_pred HHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHCCCEeecCCcE
Confidence 4789999999999888777777653 3344455567899988877654
No 397
>PRK09458 pspB phage shock protein B; Provisional
Probab=47.10 E-value=52 Score=24.19 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhcCcCCCCCC-CCCHHHHHHHH
Q 013461 43 LLLVVILFLLSQKSYKPPKR-PLTKKEIDELC 73 (442)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~ 73 (442)
+++++-+|+++.++.|.+.. .||++|.+.|.
T Consensus 14 ~ifVaPiWL~LHY~sk~~~~~~Ls~~d~~~L~ 45 (75)
T PRK09458 14 VLFVAPIWLWLHYRSKRQGSQGLSQEEQQRLA 45 (75)
T ss_pred HHHHHHHHHHHhhcccccCCCCCCHHHHHHHH
Confidence 34456678888876655544 89998865554
No 398
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=46.71 E-value=1.1e+02 Score=30.71 Aligned_cols=78 Identities=18% Similarity=0.249 Sum_probs=52.2
Q ss_pred HHHHhhhCC---CcEEEEcchHHHHHhhhhhhc--------------cCCCEEEeCCCchHHHHHHHHhcC---CeEEEe
Q 013461 161 ARIAKFLGT---PDSILYSYGLSTMFSAIPCFC--------------KKGDLIVADEGVHWGIQNGLYLSR---STVVYF 220 (442)
Q Consensus 161 ~~lA~~~g~---e~~i~~~sG~~a~~~ai~a~~--------------~~gd~Vi~~~~~h~s~~~~~~l~g---~~v~~~ 220 (442)
.++-+..|- .+.|+..+|+-+|.-++.+.. =|.-+++.++-+|.|+.+++...| -.++.+
T Consensus 148 ~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v 227 (510)
T KOG0629|consen 148 AKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKV 227 (510)
T ss_pred HHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEe
Confidence 334444452 367999999877766664321 132356788999999999998877 455555
Q ss_pred cCC-----CHHHHHHHHHhhccc
Q 013461 221 KHN-----DMDSLRNTLERVTAD 238 (442)
Q Consensus 221 ~~~-----d~~~Le~~l~~~~~~ 238 (442)
+.+ +++|||+.+.+...+
T Consensus 228 ~t~e~Gkm~~~dLe~kile~k~k 250 (510)
T KOG0629|consen 228 KTDERGKMIPDDLEKKILEAKAK 250 (510)
T ss_pred cccccCccchHHHHHHHHHHHhc
Confidence 543 689999887665443
No 399
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=46.44 E-value=26 Score=25.86 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=19.7
Q ss_pred HHHHHHHHHhcCcCCCCCC-CCCHHHHHHHHh
Q 013461 44 LLVVILFLLSQKSYKPPKR-PLTKKEIDELCD 74 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~~ 74 (442)
++++.+|+++.++.|.+.. .||++|.+.|.+
T Consensus 15 ifVap~WL~lHY~sk~~~~~gLs~~d~~~L~~ 46 (75)
T PF06667_consen 15 IFVAPIWLILHYRSKWKSSQGLSEEDEQRLQE 46 (75)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCHHHHHHHHH
Confidence 3456677777766555443 899887655543
No 400
>PLN02356 phosphateglycerate kinase
Probab=39.96 E-value=4.1e+02 Score=26.84 Aligned_cols=50 Identities=16% Similarity=-0.039 Sum_probs=37.4
Q ss_pred EEE-EcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEec
Q 013461 172 SIL-YSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK 221 (442)
Q Consensus 172 ~i~-~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~ 221 (442)
.|+ .|+|..+...|..+ ..+-.-+|++++..-..-...++..|++++.++
T Consensus 106 ~VveaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 106 VVTEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 455 68898877666543 344455788888887778888999999999885
No 401
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=37.02 E-value=97 Score=21.39 Aligned_cols=31 Identities=6% Similarity=0.153 Sum_probs=26.5
Q ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 410 IRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 410 iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
+++.+..+.|+|+.+++++.+-+++.+.+..
T Consensus 4 i~i~~~~Grs~EqK~~L~~~it~a~~~~~~~ 34 (60)
T PRK02289 4 VRIDLFEGRSQEQKNALAREVTEVVSRIAKA 34 (60)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 7888877889999999999999998877643
No 402
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=33.95 E-value=1.1e+02 Score=20.98 Aligned_cols=31 Identities=13% Similarity=0.164 Sum_probs=26.4
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
.++|.+....|.|+-+++.+.|-+++.+.+.
T Consensus 3 ~i~I~~~~grs~eqk~~l~~~it~~l~~~~~ 33 (62)
T PRK00745 3 TFHIELFEGRTVEQKRKLVEEITRVTVETLG 33 (62)
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 3788888778999999999999998887654
No 403
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=33.42 E-value=1.2e+02 Score=21.13 Aligned_cols=31 Identities=6% Similarity=0.114 Sum_probs=26.4
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 409 GIRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 409 ~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
.+++.+....|.++..++++.|.+++.+.+.
T Consensus 3 ~v~i~l~~grt~eqk~~l~~~it~~l~~~lg 33 (64)
T PRK01964 3 IVQIQLLEGRPEEKIKNLIREVTEAISATLD 33 (64)
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 3788887788999999999999998887654
No 404
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=32.99 E-value=2e+02 Score=29.19 Aligned_cols=66 Identities=14% Similarity=0.010 Sum_probs=50.7
Q ss_pred HHHHHHHhhhCCCcEEEEcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC
Q 013461 158 DCEARIAKFLGTPDSILYSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN 223 (442)
Q Consensus 158 ~le~~lA~~~g~e~~i~~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~ 223 (442)
-.+++.-+++....++..|+|..+...++.+ ..+-.-+|++++..-..-...++..|++++.++.+
T Consensus 141 l~e~~~~~~~~~~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~ 207 (431)
T TIGR02035 141 LAEKKFKDFFSRYSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESD 207 (431)
T ss_pred hcchhhhhcccCceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445555677777788889999888766644 34556678999988888889999999999998754
No 405
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=31.63 E-value=1.4e+02 Score=20.06 Aligned_cols=30 Identities=7% Similarity=0.265 Sum_probs=25.4
Q ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 410 IRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 410 iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+++.+....|.|+-.++++.+.+++.+.+.
T Consensus 3 i~i~~~~grt~eqk~~l~~~i~~~l~~~~g 32 (58)
T cd00491 3 VQIYILEGRTDEQKRELIERVTEAVSEILG 32 (58)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 677777777999999999999999887663
No 406
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=30.83 E-value=2.5e+02 Score=28.12 Aligned_cols=61 Identities=13% Similarity=-0.011 Sum_probs=46.2
Q ss_pred HHHhhhCCCcEEEEcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC
Q 013461 162 RIAKFLGTPDSILYSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH 222 (442)
Q Consensus 162 ~lA~~~g~e~~i~~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~ 222 (442)
+..+.+....++..|+|..+...|..+ ..+-.-+|++++..-..-...++..|++++.++.
T Consensus 127 ~~~~~~~~~~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~ 188 (404)
T cd06447 127 KFRKLFSQYSIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYET 188 (404)
T ss_pred hhhhcccCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECC
Confidence 334445555678889999887766643 3455667899998888888999999999999874
No 407
>TIGR02867 spore_II_P stage II sporulation protein P. Stage II sporulation protein P is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIIP, along with SpoIIM and SpoIID, is one of three major proteins involved in engulfment of the forespore by the mother cell. This protein family is named for the single member in Bacillus subtilis, although most sporulating bacteria have two members.
Probab=29.55 E-value=4.1e+02 Score=23.67 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=27.4
Q ss_pred CCCceEEEecCC-CCHHHHHHHHHHHHHHHHHHh
Q 013461 406 LPVGIRLFVSAA-HSEADLVKACESLKRISAVVL 438 (442)
Q Consensus 406 ~~~~iRi~~~~~-~t~eei~~~i~~l~~~~~~~~ 438 (442)
.|+.+-|=+... +|.+|..+.++.|.+++.+++
T Consensus 162 ~~~alLiEiG~~~Nt~eEa~~s~~~lA~~i~~~l 195 (196)
T TIGR02867 162 SPNAILIEVGGVDNTLEEAKRSADYLAEAIAEYL 195 (196)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 356788888764 899999999999999998765
No 408
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=27.99 E-value=1.7e+02 Score=20.11 Aligned_cols=30 Identities=10% Similarity=0.237 Sum_probs=25.5
Q ss_pred eEEEec-CCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 410 IRLFVS-AAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 410 iRi~~~-~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+++.+. ...|.|+-.++++.+-+++.+.+.
T Consensus 3 i~i~i~~~grt~eqK~~l~~~it~~l~~~lg 33 (63)
T TIGR00013 3 VNIYILKEGRTDEQKRQLIEGVTEAMAETLG 33 (63)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 677777 678999999999999999888764
No 409
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=27.85 E-value=2.1e+02 Score=25.29 Aligned_cols=83 Identities=22% Similarity=0.235 Sum_probs=43.2
Q ss_pred ECCeeEEEe-ecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC-CCcE-EEEcchHHHH
Q 013461 106 ISGKEVVNF-ASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG-TPDS-ILYSYGLSTM 182 (442)
Q Consensus 106 ~~G~~~id~-~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g-~e~~-i~~~sG~~a~ 182 (442)
++|..+||+ ++...+|+ |++.++.. .+ -..--.......+++-+. .++ ..++ ++-...+
T Consensus 42 i~g~~~LDlFAGSGaLGl-----------EAlSRGA~-~~--~~vE~~~~a~~~l~~N~~-~l~~~~~~~~~~~da~--- 103 (187)
T COG0742 42 IEGARVLDLFAGSGALGL-----------EALSRGAA-RV--VFVEKDRKAVKILKENLK-ALGLEGEARVLRNDAL--- 103 (187)
T ss_pred cCCCEEEEecCCccHhHH-----------HHHhCCCc-eE--EEEecCHHHHHHHHHHHH-HhCCccceEEEeecHH---
Confidence 468899996 66665654 33444211 10 111122334445555544 345 3334 3333333
Q ss_pred HhhhhhhccC--CCEEEeCCCchHHHH
Q 013461 183 FSAIPCFCKK--GDLIVADEGVHWGIQ 207 (442)
Q Consensus 183 ~~ai~a~~~~--gd~Vi~~~~~h~s~~ 207 (442)
.+++.+.++ =|+|+.|+|++..+.
T Consensus 104 -~~L~~~~~~~~FDlVflDPPy~~~l~ 129 (187)
T COG0742 104 -RALKQLGTREPFDLVFLDPPYAKGLL 129 (187)
T ss_pred -HHHHhcCCCCcccEEEeCCCCccchh
Confidence 334444444 799999999995443
No 410
>KOG2107 consensus Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=27.36 E-value=90 Score=26.75 Aligned_cols=97 Identities=20% Similarity=0.162 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhhhC----CC-cE--EEEcchH----HHHHhhhhhhccCCC
Q 013461 126 EKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLG----TP-DS--ILYSYGL----STMFSAIPCFCKKGD 194 (442)
Q Consensus 126 p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~~g----~e-~~--i~~~sG~----~a~~~ai~a~~~~gd 194 (442)
.++.+.+....+++|...-. .+..-.+...+.++++..|+. .+ ++ ++-++|+ .....-|+.++++||
T Consensus 47 ~e~~~~L~~lr~e~~~~~~d--~~~~~~e~~~nfdeKvk~FfEEhlh~deeiR~il~GtgYfDVrd~dd~WIRi~vekGD 124 (179)
T KOG2107|consen 47 YELDEELDRLREERGYSYMD--ICTVCPETLPNFDEKVKSFFEEHLHEDEEIRYILEGTGYFDVRDKDDQWIRIFVEKGD 124 (179)
T ss_pred HHHHHHHHHHHHHcCCceee--EEEEchhhcccHHHHHHHHHHHhcCchhheEEEeecceEEeeccCCCCEEEEEEecCC
Confidence 45556666666666543211 122223444567778887774 33 33 4445665 345667899999999
Q ss_pred EEEeCCCchH-------HHHHHHHhcCCeEEEecCCC
Q 013461 195 LIVADEGVHW-------GIQNGLYLSRSTVVYFKHND 224 (442)
Q Consensus 195 ~Vi~~~~~h~-------s~~~~~~l~g~~v~~~~~~d 224 (442)
.|+++.+.+. ...+++++-..++.+-+.|-
T Consensus 125 livlPaGiyHRFTtt~~n~vkamRlF~~~p~wta~nR 161 (179)
T KOG2107|consen 125 LIVLPAGIYHRFTTTPSNYVKAMRLFVGEPKWTAYNR 161 (179)
T ss_pred EEEecCcceeeeecCchHHHHHHHHhcCCcccccCCC
Confidence 9998876543 35677888777777766653
No 411
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=26.94 E-value=1.7e+02 Score=19.91 Aligned_cols=30 Identities=7% Similarity=0.081 Sum_probs=25.4
Q ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHHhh
Q 013461 410 IRLFVSAAHSEADLVKACESLKRISAVVLR 439 (442)
Q Consensus 410 iRi~~~~~~t~eei~~~i~~l~~~~~~~~~ 439 (442)
+++.+....|+++..++++.|.+.+.+.+.
T Consensus 4 i~i~~~~Grs~eqk~~l~~~it~~l~~~~~ 33 (61)
T PRK02220 4 VHIKLIEGRTEEQLKALVKDVTAAVSKNTG 33 (61)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 778777778999999999999998887653
No 412
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=26.24 E-value=1.8e+02 Score=19.75 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=24.8
Q ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013461 410 IRLFVSAAHSEADLVKACESLKRISAVVLRD 440 (442)
Q Consensus 410 iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~ 440 (442)
|++.+....|.++-.++++.+.+++.+.+..
T Consensus 3 I~i~~~~g~~~e~K~~l~~~it~~~~~~lg~ 33 (60)
T PF01361_consen 3 ITIKIPEGRTAEQKRELAEAITDAVVEVLGI 33 (60)
T ss_dssp EEEEEESTS-HHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHhCc
Confidence 6777777779999999999999998877643
No 413
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=25.87 E-value=1.1e+02 Score=22.55 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=18.3
Q ss_pred HHHHHHHHHhcCcCCCCCC-CCCHHHHHHHH
Q 013461 44 LLVVILFLLSQKSYKPPKR-PLTKKEIDELC 73 (442)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~ 73 (442)
+++..+|+++.++.|.+.. .+|++|.+.|.
T Consensus 15 ifVap~wl~lHY~~k~~~~~~ls~~d~~~L~ 45 (75)
T TIGR02976 15 IFVAPLWLILHYRSKRKTAASLSTDDQALLQ 45 (75)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCHHHHHHHH
Confidence 3446667777665554433 68887766554
No 414
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=24.39 E-value=28 Score=33.16 Aligned_cols=23 Identities=22% Similarity=0.456 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHhcCcCCCCC
Q 013461 39 FVEVLLLVVILFLLSQKSYKPPK 61 (442)
Q Consensus 39 ~~e~~~~~~~~~~~~~~~~~~~~ 61 (442)
++=++||..||||++++|.|.++
T Consensus 265 IliIVLIMvIIYLILRYRRKKKm 287 (299)
T PF02009_consen 265 ILIIVLIMVIIYLILRYRRKKKM 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 33446778999999997664443
No 415
>COG4273 Uncharacterized conserved protein [Function unknown]
Probab=23.32 E-value=1.8e+02 Score=23.69 Aligned_cols=56 Identities=20% Similarity=0.268 Sum_probs=39.6
Q ss_pred HHHHHHHHhCCEEEeeccCcccccCCCCCceEEEecCCCCHHHHHHHHHHHHHHHHHHhhcc
Q 013461 380 DIADWALKEDGVFVVTSKRSMLDKCRLPVGIRLFVSAAHSEADLVKACESLKRISAVVLRDR 441 (442)
Q Consensus 380 ~i~~~~L~~~GV~v~~~~~~~~~~~~~~~~iRi~~~~~~t~eei~~~i~~l~~~~~~~~~~~ 441 (442)
.-+.++|++.||.+.... ++.. -+|+=..+...++||+++.+..+++++..-++++
T Consensus 79 ~Catk~l~~AGv~~D~~l--~itd----lGikK~~~~D~~~edv~kv~~~i~e~l~~~~~~~ 134 (135)
T COG4273 79 RCATKCLAEAGVQADVHL--TITD----LGIKKTYPSDCKDEDVEKVARTIKEALTIKLNRK 134 (135)
T ss_pred HHHHHHHHHhccceeEEE--Eehh----cccccCCCCCCCHHHHHHHHHHHHHHhhhccccc
Confidence 456778888898665432 2211 2366677888999999999999999887655443
No 416
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=23.30 E-value=5.7e+02 Score=25.30 Aligned_cols=61 Identities=8% Similarity=-0.051 Sum_probs=45.3
Q ss_pred HHHhhhCCCcEEEEcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecC
Q 013461 162 RIAKFLGTPDSILYSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKH 222 (442)
Q Consensus 162 ~lA~~~g~e~~i~~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~ 222 (442)
.+.+.+|...++..|+|..+...|..+ ..+-.-+|++++.....-...++..|++++.++.
T Consensus 87 ~~~~~~~~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~ 148 (376)
T TIGR01747 87 AIGEKMGQATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDM 148 (376)
T ss_pred HHHhhcCCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECC
Confidence 444445667788889998887666543 3455567888888777778888999999999975
No 417
>PRK08246 threonine dehydratase; Provisional
Probab=23.21 E-value=6.6e+02 Score=23.95 Aligned_cols=55 Identities=13% Similarity=-0.045 Sum_probs=40.3
Q ss_pred CCcEEEEcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC
Q 013461 169 TPDSILYSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN 223 (442)
Q Consensus 169 ~e~~i~~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~ 223 (442)
....+..|+|..+...+..+ ..+-.-+|+++...-..-...++..|++++.++.+
T Consensus 68 ~~~vv~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 123 (310)
T PRK08246 68 AAGVVAASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAE 123 (310)
T ss_pred CCeEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCC
Confidence 45567778888777665543 34556678888877767777889999999988753
No 418
>PRK08329 threonine synthase; Validated
Probab=22.92 E-value=4.3e+02 Score=25.75 Aligned_cols=56 Identities=9% Similarity=-0.027 Sum_probs=40.4
Q ss_pred CCCcEEEEcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC
Q 013461 168 GTPDSILYSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN 223 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~ 223 (442)
|.+.++..|+|..+...|..+ ..+-.-+|++++..-..-...++..|++++.++.+
T Consensus 103 g~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~ 159 (347)
T PRK08329 103 GINEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEGD 159 (347)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 556678888888776655543 34555578888777666777788899999998754
No 419
>PRK06450 threonine synthase; Validated
Probab=22.73 E-value=5e+02 Score=25.22 Aligned_cols=63 Identities=14% Similarity=-0.021 Sum_probs=46.4
Q ss_pred CCCcEEEEcchHHHHHhhhh-hhccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCCCHHHHHHH
Q 013461 168 GTPDSILYSYGLSTMFSAIP-CFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRNT 231 (442)
Q Consensus 168 g~e~~i~~~sG~~a~~~ai~-a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~d~~~Le~~ 231 (442)
|...++..|+|..+...+.. +..+-.-+|++++.....-...++..|++++.++. +.++..++
T Consensus 96 g~~~vv~aSsGN~g~slA~~aa~~G~~~~i~vP~~~~~~k~~~i~~~GA~vi~v~~-~~~~~~~~ 159 (338)
T PRK06450 96 GIKQISEDSSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQIESYGAEVVRVRG-SREDVAKA 159 (338)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECC-CHHHHHHH
Confidence 55677888889877655543 34566678999988888888889999999999875 45554444
No 420
>PF02639 DUF188: Uncharacterized BCR, YaiI/YqxD family COG1671; InterPro: IPR003791 This entry describes proteins of unknown function.
Probab=22.54 E-value=90 Score=25.76 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=38.9
Q ss_pred cEEEEcchHHHHHhhhhhhccCCCEEEeCCCchHHHHHHHHhcCCeEEEec--CCCHHHHHHHHHh
Q 013461 171 DSILYSYGLSTMFSAIPCFCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFK--HNDMDSLRNTLER 234 (442)
Q Consensus 171 ~~i~~~sG~~a~~~ai~a~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~--~~d~~~Le~~l~~ 234 (442)
+.+++.+|.++....|--.+++||+|+..+.- ...-+--.|+.+.--. .-+.+.++.+|..
T Consensus 30 ~~i~Vd~g~DaaD~~I~~~~~~gDiVITqDig---LA~~~l~Kga~vl~~rG~~yt~~nI~~~L~~ 92 (130)
T PF02639_consen 30 EMIVVDSGFDAADFYIVNHAKPGDIVITQDIG---LASLLLAKGAYVLNPRGKEYTKENIDELLAM 92 (130)
T ss_pred EEEEECCCCChHHHHHHHcCCCCCEEEECCHH---HHHHHHHCCCEEECCCCCCCCHHHHHHHHHH
Confidence 56888999999999898889999999998742 3222333345443211 0144555555543
No 421
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=22.31 E-value=44 Score=32.45 Aligned_cols=21 Identities=24% Similarity=0.455 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhcCcCCCCC
Q 013461 41 EVLLLVVILFLLSQKSYKPPK 61 (442)
Q Consensus 41 e~~~~~~~~~~~~~~~~~~~~ 61 (442)
=++||..|+||++|.|.|.++
T Consensus 321 vIVLIMvIIYLILRYRRKKKM 341 (353)
T TIGR01477 321 IIVLIMVIIYLILRYRRKKKM 341 (353)
T ss_pred HHHHHHHHHHHHHHhhhcchh
Confidence 346778999999997766543
No 422
>PTZ00046 rifin; Provisional
Probab=22.18 E-value=45 Score=32.50 Aligned_cols=21 Identities=24% Similarity=0.467 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhcCcCCCCC
Q 013461 41 EVLLLVVILFLLSQKSYKPPK 61 (442)
Q Consensus 41 e~~~~~~~~~~~~~~~~~~~~ 61 (442)
=++||..|+|+++|.|.|.++
T Consensus 326 VIVLIMvIIYLILRYRRKKKM 346 (358)
T PTZ00046 326 VIVLIMVIIYLILRYRRKKKM 346 (358)
T ss_pred HHHHHHHHHHHHHHhhhcchh
Confidence 346777999999997766543
No 423
>PHA02689 ORF051 putative membrane protein; Provisional
Probab=21.97 E-value=80 Score=25.61 Aligned_cols=24 Identities=13% Similarity=0.207 Sum_probs=19.2
Q ss_pred EeehhHHHHHHHHHHHHHHHHhcC
Q 013461 32 VHISGHLFVEVLLLVVILFLLSQK 55 (442)
Q Consensus 32 ~~~~~~~~~e~~~~~~~~~~~~~~ 55 (442)
|..-|=+++|+++++.++|++++.
T Consensus 28 ~kY~~Iv~FEi~va~~L~~~FFk~ 51 (128)
T PHA02689 28 ESYLAIAVLELLLALALALVFFRD 51 (128)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Confidence 444467899999999999998864
No 424
>PRK11761 cysM cysteine synthase B; Provisional
Probab=21.64 E-value=5.7e+02 Score=24.24 Aligned_cols=59 Identities=10% Similarity=0.063 Sum_probs=41.8
Q ss_pred cEEEEcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC-CHHHHH
Q 013461 171 DSILYSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN-DMDSLR 229 (442)
Q Consensus 171 ~~i~~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~-d~~~Le 229 (442)
..+..|+|..+...|..+ ..+-.-+|++++..-..-...++..|++++.++.. +.++..
T Consensus 65 ~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~ 125 (296)
T PRK11761 65 TLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGAR 125 (296)
T ss_pred EEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHH
Confidence 467778888777666543 34555578888877777888899999999999852 344443
No 425
>PF08624 CRC_subunit: Chromatin remodelling complex Rsc7/Swp82 subunit; InterPro: IPR013933 This entry contains subunits of the chromatin remodelling complexes. Saccharomyces cerevisiae (Baker's yeast) P32832 from SWISSPROT and its paralogue P43554 from SWISSPROT have been identified as subunits of the RSC chromatin remodelling complex, and SWI/SNF chromatin remodelling complex respectively [].
Probab=21.48 E-value=47 Score=27.67 Aligned_cols=71 Identities=21% Similarity=0.285 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHH--HHHHhcCcCCCCCCCCCHHHHHHHHhhhcCCCCCcccccccccCCCeee-----cCCCCeEEECCe
Q 013461 37 HLFVEVLLLVVI--LFLLSQKSYKPPKRPLTKKEIDELCDEWVPESLIPPIIEEMRCEPPVLE-----SAAGPHTIISGK 109 (442)
Q Consensus 37 ~~~~e~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~G~ 109 (442)
=|..|.+-.+.- -|+++++--+--+-..|++|.+.|++. .+.|.--. .+ ...+|. ..-|.+|.++|+
T Consensus 49 mL~td~ar~lg~rDs~~ff~~~~~l~ki~~t~~ek~~Li~~----~ll~~s~~-~r-~i~~VTARS~F~~FGA~iI~~G~ 122 (139)
T PF08624_consen 49 MLSTDPARCLGFRDSYLFFRKHPQLYKIIATQEEKDFLIER----GLLPSSYR-SR-QITIVTARSAFREFGARIIVGGR 122 (139)
T ss_pred EEeHHHHHHhccccHHHHHHhCCceeeeeCCHHHHHHHHHc----CCCCcccC-CC-ceEEEEhHHHHHHhCcHheeCCC
Confidence 344555444422 245555422222337899999999944 55552111 01 122222 245888889999
Q ss_pred eEEE
Q 013461 110 EVVN 113 (442)
Q Consensus 110 ~~id 113 (442)
+++|
T Consensus 123 rviD 126 (139)
T PF08624_consen 123 RVID 126 (139)
T ss_pred Eeec
Confidence 9997
No 426
>PLN00415 3-ketoacyl-CoA synthase
Probab=20.37 E-value=54 Score=33.39 Aligned_cols=73 Identities=18% Similarity=0.232 Sum_probs=48.5
Q ss_pred CCeeEEEeecCCCCCCCCChHHHHHHHHHHHhcCCCCCccCccccCcHHHHHHHHHHHhh-h-CCCcE--EEEcchHHHH
Q 013461 107 SGKEVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF-L-GTPDS--ILYSYGLSTM 182 (442)
Q Consensus 107 ~G~~~id~~s~~~l~~~~~p~v~ea~~~~l~~~g~~~~~~~~~~g~~~~~~~le~~lA~~-~-g~e~~--i~~~sG~~a~ 182 (442)
.|+.+||-...+ |++. ++-.++..+.+++||+.|+.+ +...|++..++- . ..+.+ +-|.+|+.++
T Consensus 365 GGraVLdave~~-LgL~--~~~le~Sr~vL~r~GN~SSsS--------V~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~e 433 (466)
T PLN00415 365 GGRALLDAVEKG-LGLS--EFDLEPSRMTLHRFGNTSSSS--------LWYELAYVEAKCRVKRGDRVWQLAFGSGFKCN 433 (466)
T ss_pred CcHHHHHHHHHH-cCCC--HHHHHHHHHHHHHhCCchhhh--------HHHHHHHHHhhccCCCCCEEEEEEEcCcchhh
Confidence 678888864444 6664 778888999999999877543 233566555441 1 22444 5577888888
Q ss_pred Hhhhhhhc
Q 013461 183 FSAIPCFC 190 (442)
Q Consensus 183 ~~ai~a~~ 190 (442)
..+.+++.
T Consensus 434 s~v~~~~~ 441 (466)
T PLN00415 434 SIVWRALR 441 (466)
T ss_pred HhHHHHhc
Confidence 87777664
No 427
>PRK02991 D-serine dehydratase; Provisional
Probab=20.26 E-value=4.5e+02 Score=26.74 Aligned_cols=59 Identities=14% Similarity=-0.008 Sum_probs=44.9
Q ss_pred hhhCCCcEEEEcchHHHHHhhhhh-hccCCCEEEeCCCchHHHHHHHHhcCCeEEEecCC
Q 013461 165 KFLGTPDSILYSYGLSTMFSAIPC-FCKKGDLIVADEGVHWGIQNGLYLSRSTVVYFKHN 223 (442)
Q Consensus 165 ~~~g~e~~i~~~sG~~a~~~ai~a-~~~~gd~Vi~~~~~h~s~~~~~~l~g~~v~~~~~~ 223 (442)
+++....++..|+|..+...+..+ ..+-.-+|++++.....-...++..|++++.++.+
T Consensus 153 ~~~~~~~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~ 212 (441)
T PRK02991 153 QFFSQYSIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGD 212 (441)
T ss_pred hhccCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC
Confidence 444445678888998877666543 34666689999998888889999999999988753
No 428
>PF15361 RIC3: Resistance to inhibitors of cholinesterase homologue 3
Probab=20.24 E-value=1.4e+02 Score=25.30 Aligned_cols=13 Identities=23% Similarity=0.401 Sum_probs=9.3
Q ss_pred CCCHHHHHHHHhh
Q 013461 63 PLTKKEIDELCDE 75 (442)
Q Consensus 63 ~l~~~~~~~l~~~ 75 (442)
.+++.|+.+|.++
T Consensus 127 ~~~~~eL~qLq~r 139 (152)
T PF15361_consen 127 KITDYELAQLQER 139 (152)
T ss_pred cchHHHHHHHHHH
Confidence 5777788877654
Done!