Citrus Sinensis ID: 013461
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Long chain base biosynthesis protein 1 | Serine palmitoyltransferase (SPT). The heterodimer formed with LCB2 constitutes the catalytic core. Involved in the regulation of the programmed cell death (PCD) signaling pathway. Plays an important role during male gametogenesis and embryogenesis. | confident | Q94IB8 |
| Long chain base biosynthesis protein 1b | Serine palmitoyltransferase (SPT). The heterodimer formed with LCB2 constitutes the catalytic core. | probable | Q6K8E7 |
| Serine palmitoyltransferase 1 | Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates. The SPTLC1-SPTLC2-SPTSSB complex displays a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme has the ability to use a broader range of acyl-CoAs. | probable | O35704 |
Prediction of Enzyme Commission Number
No confident prediction of EC number!
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 2W8T, chain A Confidence level:very confident Coverage over the Query: 93-439 View the alignment between query and template View the model in PyMOL |
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Template: 3DXV, chain A Confidence level:confident Coverage over the Query: 66-437 View the alignment between query and template View the model in PyMOL |