Query 013464
Match_columns 442
No_of_seqs 187 out of 1174
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 11:04:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013464.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013464hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pmi_A PMI, phosphomannose iso 100.0 1.2E-95 4E-100 757.4 37.0 405 10-435 4-439 (440)
2 2wfp_A Mannose-6-phosphate iso 100.0 8.2E-96 3E-100 750.5 33.9 374 11-435 4-393 (394)
3 1zx5_A Mannosephosphate isomer 100.0 2.3E-72 8E-77 558.1 22.1 290 10-436 7-300 (300)
4 1qwr_A Mannose-6-phosphate iso 100.0 6.5E-71 2.2E-75 552.5 27.8 302 9-434 6-319 (319)
5 3rns_A Cupin 2 conserved barre 98.9 2.3E-08 7.8E-13 94.6 15.1 141 281-435 76-226 (227)
6 3h7j_A Bacilysin biosynthesis 98.4 4.5E-06 1.6E-10 79.4 15.6 78 360-437 142-222 (243)
7 1sef_A Conserved hypothetical 98.2 5.2E-05 1.8E-09 73.4 17.4 143 281-432 103-255 (274)
8 1sq4_A GLXB, glyoxylate-induce 98.1 3.9E-05 1.3E-09 74.7 14.9 72 360-431 188-262 (278)
9 1sfn_A Conserved hypothetical 98.1 9E-05 3.1E-09 70.7 16.7 72 360-431 162-236 (246)
10 4e2q_A Ureidoglycine aminohydr 98.0 0.00017 5.8E-09 69.7 16.4 131 281-430 110-256 (266)
11 1rc6_A Hypothetical protein YL 98.0 6.9E-05 2.4E-09 71.9 13.5 72 360-431 176-251 (261)
12 3fjs_A Uncharacterized protein 97.9 0.00013 4.4E-09 61.1 12.4 81 354-436 29-109 (114)
13 2d40_A Z3393, putative gentisa 97.9 0.00016 5.5E-09 72.7 14.5 71 362-432 267-337 (354)
14 1yhf_A Hypothetical protein SP 97.9 0.00017 5.8E-09 59.5 12.3 78 360-437 37-114 (115)
15 2vqa_A SLL1358 protein, MNCA; 97.9 0.00058 2E-08 68.2 18.1 77 361-437 232-316 (361)
16 3bu7_A Gentisate 1,2-dioxygena 97.9 0.00033 1.1E-08 71.4 16.2 72 361-432 292-366 (394)
17 2q30_A Uncharacterized protein 97.8 0.00018 6.3E-09 58.6 11.3 78 360-437 30-110 (110)
18 2qnk_A 3-hydroxyanthranilate 3 97.8 0.00014 4.8E-09 70.1 11.6 73 362-435 206-279 (286)
19 2pfw_A Cupin 2, conserved barr 97.8 0.00028 9.4E-09 58.3 12.0 77 361-437 32-108 (116)
20 2gu9_A Tetracenomycin polyketi 97.8 0.00049 1.7E-08 56.1 13.0 79 360-438 18-101 (113)
21 1j58_A YVRK protein; cupin, de 97.7 0.00061 2.1E-08 68.7 16.0 77 361-437 255-339 (385)
22 1v70_A Probable antibiotics sy 97.7 0.00057 1.9E-08 54.6 12.5 77 360-436 25-104 (105)
23 4e2g_A Cupin 2 conserved barre 97.7 0.00038 1.3E-08 58.5 11.7 78 360-437 38-116 (126)
24 3nw4_A Gentisate 1,2-dioxygena 97.7 0.00048 1.6E-08 69.6 13.8 73 360-432 276-348 (368)
25 3lwc_A Uncharacterized protein 97.7 0.00036 1.2E-08 59.1 11.0 77 359-436 36-113 (119)
26 3myx_A Uncharacterized protein 97.6 0.00089 3E-08 63.6 13.8 142 280-427 83-231 (238)
27 1y3t_A Hypothetical protein YX 97.6 0.0024 8.3E-08 62.6 17.3 55 383-437 239-294 (337)
28 2opk_A Hypothetical protein; p 97.5 0.00093 3.2E-08 55.7 10.7 64 360-423 28-95 (112)
29 3h8u_A Uncharacterized conserv 97.4 0.0013 4.4E-08 55.1 11.4 78 360-437 36-117 (125)
30 2ozj_A Cupin 2, conserved barr 97.4 0.001 3.5E-08 54.8 10.4 74 361-434 36-109 (114)
31 2b8m_A Hypothetical protein MJ 97.4 0.00076 2.6E-08 56.0 9.3 78 360-437 24-104 (117)
32 3ibm_A Cupin 2, conserved barr 97.4 0.0028 9.5E-08 56.7 13.3 76 361-436 54-132 (167)
33 4i4a_A Similar to unknown prot 97.4 0.00091 3.1E-08 56.2 9.5 78 361-438 32-111 (128)
34 2pyt_A Ethanolamine utilizatio 97.3 0.00082 2.8E-08 58.1 9.2 81 356-438 50-130 (133)
35 3kgz_A Cupin 2 conserved barre 97.3 0.0017 5.7E-08 57.6 11.2 82 355-436 36-119 (156)
36 1vj2_A Novel manganese-contain 97.3 0.0011 3.7E-08 56.1 9.4 77 360-436 45-123 (126)
37 3jzv_A Uncharacterized protein 97.3 0.0022 7.6E-08 57.4 11.7 81 355-435 45-127 (166)
38 3l2h_A Putative sugar phosphat 97.3 0.002 6.7E-08 56.8 11.2 78 360-437 43-125 (162)
39 2oa2_A BH2720 protein; 1017534 97.2 0.0023 8E-08 55.6 11.0 79 360-438 40-127 (148)
40 1uij_A Beta subunit of beta co 97.2 0.0036 1.2E-07 64.3 13.8 74 363-436 249-342 (416)
41 2vpv_A Protein MIF2, MIF2P; nu 97.2 0.003 1E-07 56.8 11.3 81 355-435 80-164 (166)
42 2fqp_A Hypothetical protein BP 97.2 0.002 6.8E-08 51.8 9.3 73 360-432 15-92 (97)
43 3rns_A Cupin 2 conserved barre 97.2 0.0032 1.1E-07 58.9 12.0 77 360-436 34-110 (227)
44 3cew_A Uncharacterized cupin p 97.2 0.0026 8.8E-08 53.4 10.3 80 360-439 23-106 (125)
45 1lr5_A Auxin binding protein 1 97.1 0.0037 1.3E-07 55.1 11.2 78 360-437 38-127 (163)
46 4axo_A EUTQ, ethanolamine util 97.1 0.0027 9.3E-08 56.2 10.0 73 362-436 65-137 (151)
47 3i7d_A Sugar phosphate isomera 97.0 0.0039 1.3E-07 55.4 10.8 79 359-437 39-123 (163)
48 2phl_A Phaseolin; plant SEED s 97.0 0.0062 2.1E-07 62.1 12.8 76 361-436 237-325 (397)
49 1o4t_A Putative oxalate decarb 96.9 0.0072 2.5E-07 51.5 11.1 72 361-432 55-129 (133)
50 2ea7_A 7S globulin-1; beta bar 96.9 0.0084 2.9E-07 61.8 13.5 74 363-436 266-358 (434)
51 1y9q_A Transcriptional regulat 96.9 0.01 3.5E-07 53.5 12.6 75 360-435 101-179 (192)
52 3ht1_A REMF protein; cupin fol 96.9 0.0031 1.1E-07 53.9 8.6 75 360-434 36-114 (145)
53 2f4p_A Hypothetical protein TM 96.9 0.0059 2E-07 53.2 10.1 75 361-435 46-123 (147)
54 3lag_A Uncharacterized protein 96.7 0.0024 8.4E-08 52.0 6.2 77 354-432 10-92 (98)
55 1juh_A Quercetin 2,3-dioxygena 96.7 0.0073 2.5E-07 60.4 10.9 71 362-432 248-323 (350)
56 2bnm_A Epoxidase; oxidoreducta 96.7 0.013 4.4E-07 53.0 11.6 73 360-432 114-196 (198)
57 4e2q_A Ureidoglycine aminohydr 96.7 0.0055 1.9E-07 59.2 9.2 73 360-432 67-140 (266)
58 3es1_A Cupin 2, conserved barr 96.7 0.011 3.7E-07 53.4 10.4 76 361-437 77-155 (172)
59 1y3t_A Hypothetical protein YX 96.6 0.017 5.7E-07 56.6 12.3 78 360-437 43-122 (337)
60 4h7l_A Uncharacterized protein 96.6 0.014 4.8E-07 51.8 10.4 71 363-436 47-119 (157)
61 2o8q_A Hypothetical protein; c 96.5 0.0083 2.8E-07 50.7 8.2 57 382-438 62-121 (134)
62 1o5u_A Novel thermotoga mariti 96.5 0.0082 2.8E-07 49.2 7.7 49 381-429 47-96 (101)
63 3d82_A Cupin 2, conserved barr 96.4 0.017 5.7E-07 45.9 9.3 50 381-430 47-97 (102)
64 1dgw_A Canavalin; duplicated s 96.4 0.013 4.4E-07 52.8 9.5 73 361-433 39-118 (178)
65 1sq4_A GLXB, glyoxylate-induce 96.3 0.015 5E-07 56.3 9.9 74 360-433 65-142 (278)
66 1sfn_A Conserved hypothetical 96.3 0.021 7.2E-07 54.1 10.6 71 360-432 47-117 (246)
67 3bcw_A Uncharacterized protein 96.2 0.017 5.9E-07 49.0 8.4 77 355-432 41-119 (123)
68 2qjv_A Uncharacterized IOLB-li 96.1 0.04 1.4E-06 53.1 11.6 78 360-437 26-113 (270)
69 2i45_A Hypothetical protein; n 96.1 0.018 6.2E-07 46.7 8.0 51 381-431 45-97 (107)
70 3myx_A Uncharacterized protein 96.1 0.071 2.4E-06 50.5 12.8 73 360-434 44-117 (238)
71 1rc6_A Hypothetical protein YL 96.0 0.024 8.2E-07 54.0 9.1 74 360-433 56-133 (261)
72 4b29_A Dimethylsulfoniopropion 95.9 0.061 2.1E-06 50.1 11.2 78 360-437 129-208 (217)
73 2cav_A Protein (canavalin); vi 95.8 0.2 6.7E-06 51.7 15.9 71 362-432 280-367 (445)
74 3es4_A Uncharacterized protein 95.8 0.13 4.3E-06 43.3 11.9 77 358-435 37-114 (116)
75 2ozi_A Hypothetical protein RP 95.7 0.031 1.1E-06 45.4 7.7 79 353-433 9-93 (98)
76 3s7i_A Allergen ARA H 1, clone 95.7 0.12 4E-06 53.0 13.6 68 363-430 263-361 (418)
77 1fi2_A Oxalate oxidase, germin 95.7 0.069 2.4E-06 48.8 10.8 75 361-435 70-155 (201)
78 1x82_A Glucose-6-phosphate iso 95.6 0.079 2.7E-06 48.1 10.8 75 362-436 66-156 (190)
79 1sef_A Conserved hypothetical 95.5 0.035 1.2E-06 53.3 8.3 73 360-432 59-135 (274)
80 2y0o_A Probable D-lyxose ketol 95.3 0.013 4.3E-07 53.1 4.2 37 277-313 116-156 (175)
81 2vqa_A SLL1358 protein, MNCA; 95.2 0.13 4.4E-06 50.9 11.9 76 361-436 50-133 (361)
82 2arc_A ARAC, arabinose operon 95.1 0.093 3.2E-06 45.1 9.1 57 381-437 36-95 (164)
83 2xlg_A SLL1785 protein, CUCA; 95.0 0.072 2.5E-06 50.5 8.8 74 360-433 40-137 (239)
84 2d40_A Z3393, putative gentisa 94.9 0.079 2.7E-06 53.0 9.2 70 361-430 98-170 (354)
85 3gbg_A TCP pilus virulence reg 94.9 0.09 3.1E-06 49.7 9.1 77 361-438 5-90 (276)
86 3h7j_A Bacilysin biosynthesis 94.8 0.16 5.6E-06 47.6 10.5 68 363-430 34-104 (243)
87 1uij_A Beta subunit of beta co 94.6 0.12 4E-06 53.0 9.7 73 362-434 48-127 (416)
88 1j58_A YVRK protein; cupin, de 94.6 0.16 5.5E-06 50.8 10.5 73 361-433 77-155 (385)
89 3nw4_A Gentisate 1,2-dioxygena 94.6 0.093 3.2E-06 52.8 8.6 63 361-423 101-164 (368)
90 1vr3_A Acireductone dioxygenas 94.5 0.075 2.6E-06 48.7 7.1 57 382-438 103-166 (191)
91 3bu7_A Gentisate 1,2-dioxygena 94.3 0.11 3.7E-06 52.9 8.4 64 360-423 120-184 (394)
92 2cav_A Protein (canavalin); vi 94.0 0.16 5.4E-06 52.4 9.2 76 361-436 84-166 (445)
93 2ea7_A 7S globulin-1; beta bar 93.9 0.15 5.2E-06 52.4 8.7 72 362-433 60-138 (434)
94 2d5f_A Glycinin A3B4 subunit; 93.9 0.28 9.7E-06 51.2 10.8 73 361-433 43-147 (493)
95 1juh_A Quercetin 2,3-dioxygena 93.0 0.36 1.2E-05 48.0 9.6 77 361-437 46-131 (350)
96 2e9q_A 11S globulin subunit be 92.8 0.47 1.6E-05 49.1 10.3 73 362-434 62-162 (459)
97 1fxz_A Glycinin G1; proglycini 92.5 0.47 1.6E-05 49.3 10.0 73 362-434 47-148 (476)
98 2phl_A Phaseolin; plant SEED s 92.4 0.37 1.3E-05 48.9 8.8 73 361-433 50-135 (397)
99 2o1q_A Putative acetyl/propion 92.1 0.16 5.6E-06 44.0 5.1 72 365-436 46-120 (145)
100 1ywk_A 4-deoxy-L-threo-5-hexos 92.1 0.42 1.4E-05 46.3 8.3 54 384-437 80-137 (289)
101 4h7l_A Uncharacterized protein 91.8 0.16 5.6E-06 44.9 4.7 31 281-312 87-119 (157)
102 3c3v_A Arachin ARAH3 isoform; 91.8 0.74 2.5E-05 48.2 10.4 74 360-433 45-160 (510)
103 2d5f_A Glycinin A3B4 subunit; 91.5 0.48 1.6E-05 49.5 8.6 71 363-433 367-445 (493)
104 2ozj_A Cupin 2, conserved barr 91.3 0.11 3.8E-06 42.3 2.9 22 281-302 77-98 (114)
105 1fxz_A Glycinin G1; proglycini 91.2 0.61 2.1E-05 48.4 9.1 72 362-433 337-416 (476)
106 3c3v_A Arachin ARAH3 isoform; 91.1 0.83 2.8E-05 47.8 10.0 72 362-433 371-450 (510)
107 3s7i_A Allergen ARA H 1, clone 90.8 0.48 1.6E-05 48.4 7.7 63 361-423 42-108 (418)
108 3ksc_A LEGA class, prolegumin; 90.8 0.65 2.2E-05 48.5 8.8 74 360-433 43-144 (496)
109 2opk_A Hypothetical protein; p 90.7 0.1 3.6E-06 42.9 2.2 20 282-301 75-94 (112)
110 2vec_A YHAK, pirin-like protei 90.7 2 7E-05 40.8 11.5 73 363-435 182-255 (256)
111 3o14_A Anti-ecfsigma factor, C 90.5 1.6 5.5E-05 40.6 10.4 72 354-432 139-211 (223)
112 1tq5_A Protein YHHW; bicupin, 90.2 4.2 0.00014 38.2 13.2 69 363-435 160-229 (242)
113 3lwc_A Uncharacterized protein 90.1 0.16 5.4E-06 42.6 2.8 23 281-303 78-100 (119)
114 2i45_A Hypothetical protein; n 90.0 0.15 5E-06 41.1 2.5 22 281-302 68-89 (107)
115 2e9q_A 11S globulin subunit be 90.0 1 3.5E-05 46.6 9.4 73 362-434 321-401 (459)
116 1o5u_A Novel thermotoga mariti 89.9 0.14 4.6E-06 41.8 2.2 21 281-301 69-89 (101)
117 3hqx_A UPF0345 protein aciad03 89.8 2.2 7.5E-05 35.4 9.3 60 371-432 46-107 (111)
118 3fjs_A Uncharacterized protein 89.7 0.16 5.5E-06 41.8 2.6 21 281-301 75-95 (114)
119 2fqp_A Hypothetical protein BP 89.5 0.17 5.8E-06 40.2 2.5 22 280-301 59-80 (97)
120 1zrr_A E-2/E-2' protein; nicke 89.5 0.23 7.8E-06 44.9 3.6 55 383-437 100-160 (179)
121 1v70_A Probable antibiotics sy 89.3 0.21 7.2E-06 39.1 2.9 22 281-302 68-89 (105)
122 3qac_A 11S globulin SEED stora 88.8 0.75 2.6E-05 47.6 7.3 72 362-433 49-164 (465)
123 1xru_A 4-deoxy-L-threo-5-hexos 88.7 0.8 2.7E-05 44.2 6.9 55 383-437 79-137 (282)
124 1yfu_A 3-hydroxyanthranilate-3 88.5 2.2 7.5E-05 38.2 9.1 58 360-418 33-94 (174)
125 3lag_A Uncharacterized protein 88.4 0.31 1.1E-05 39.2 3.3 21 281-301 60-80 (98)
126 3kgl_A Cruciferin; 11S SEED gl 88.3 1.7 5.9E-05 44.9 9.6 74 362-435 42-181 (466)
127 2gu9_A Tetracenomycin polyketi 88.1 0.25 8.5E-06 39.5 2.6 22 281-302 63-84 (113)
128 2q30_A Uncharacterized protein 88.1 0.22 7.6E-06 39.7 2.2 22 281-302 75-96 (110)
129 2pfw_A Cupin 2, conserved barr 88.0 0.29 9.9E-06 39.6 2.9 22 281-302 73-94 (116)
130 3d0j_A Uncharacterized protein 88.0 0.89 3E-05 39.3 6.0 50 382-431 49-106 (140)
131 3d82_A Cupin 2, conserved barr 87.8 0.21 7E-06 39.3 1.9 22 281-302 69-90 (102)
132 2oyz_A UPF0345 protein VPA0057 87.7 1.9 6.5E-05 34.7 7.4 48 376-424 35-84 (94)
133 3fz3_A Prunin; TREE NUT allerg 87.3 1.6 5.6E-05 45.7 8.8 72 362-434 393-472 (531)
134 2b8m_A Hypothetical protein MJ 87.3 0.24 8.1E-06 40.5 2.0 20 283-302 69-88 (117)
135 3h8u_A Uncharacterized conserv 87.0 0.23 8E-06 40.9 1.8 21 281-301 80-100 (125)
136 3ht1_A REMF protein; cupin fol 86.9 0.34 1.2E-05 40.8 2.9 23 280-302 79-101 (145)
137 4e2g_A Cupin 2 conserved barre 86.5 0.34 1.2E-05 39.9 2.6 21 281-301 80-100 (126)
138 1dgw_A Canavalin; duplicated s 86.5 0.46 1.6E-05 42.4 3.6 23 279-301 82-104 (178)
139 1zvf_A 3-hydroxyanthranilate 3 86.5 4.1 0.00014 36.5 9.6 61 354-418 29-97 (176)
140 1yhf_A Hypothetical protein SP 86.4 0.33 1.1E-05 39.2 2.4 22 281-302 79-100 (115)
141 4axo_A EUTQ, ethanolamine util 86.2 0.32 1.1E-05 42.7 2.3 23 280-302 102-124 (151)
142 3ksc_A LEGA class, prolegumin; 86.1 4.1 0.00014 42.5 10.9 70 363-432 358-435 (496)
143 2o8q_A Hypothetical protein; c 86.0 0.33 1.1E-05 40.6 2.3 23 280-302 83-105 (134)
144 2pyt_A Ethanolamine utilizatio 85.1 0.39 1.3E-05 41.0 2.3 21 281-301 94-114 (133)
145 3kgl_A Cruciferin; 11S SEED gl 85.0 3.2 0.00011 42.9 9.5 72 362-433 322-401 (466)
146 3cew_A Uncharacterized cupin p 84.7 0.39 1.3E-05 39.7 2.1 22 280-301 66-87 (125)
147 3eo6_A Protein of unknown func 84.6 3.1 0.00011 34.1 7.3 48 375-423 47-96 (106)
148 2ozi_A Hypothetical protein RP 84.6 0.55 1.9E-05 37.8 2.8 24 281-304 60-84 (98)
149 1lr5_A Auxin binding protein 1 84.5 0.46 1.6E-05 41.3 2.6 22 280-301 88-109 (163)
150 2oa2_A BH2720 protein; 1017534 84.5 0.41 1.4E-05 41.1 2.2 20 282-301 90-109 (148)
151 3bcw_A Uncharacterized protein 84.4 0.42 1.4E-05 40.3 2.2 21 281-301 88-108 (123)
152 1vr3_A Acireductone dioxygenas 84.4 0.41 1.4E-05 43.7 2.2 23 281-303 128-150 (191)
153 2bnm_A Epoxidase; oxidoreducta 84.4 0.53 1.8E-05 42.1 2.9 22 280-301 162-183 (198)
154 4i4a_A Similar to unknown prot 84.3 0.47 1.6E-05 39.1 2.4 21 281-301 73-93 (128)
155 3ibm_A Cupin 2, conserved barr 84.2 0.55 1.9E-05 41.5 2.9 21 281-301 95-115 (167)
156 2arc_A ARAC, arabinose operon 84.1 0.57 2E-05 39.9 2.9 23 280-302 56-78 (164)
157 3kgz_A Cupin 2 conserved barre 84.1 0.48 1.6E-05 41.5 2.4 21 281-301 83-103 (156)
158 3jzv_A Uncharacterized protein 83.8 0.59 2E-05 41.4 2.9 21 281-301 92-112 (166)
159 3qac_A 11S globulin SEED stora 83.8 4.1 0.00014 42.1 9.7 71 363-433 323-401 (465)
160 1y9q_A Transcriptional regulat 83.5 0.56 1.9E-05 41.8 2.7 22 281-302 145-166 (192)
161 2q1z_B Anti-sigma factor CHRR, 83.3 2.9 9.8E-05 37.9 7.5 67 362-432 124-192 (195)
162 1vj2_A Novel manganese-contain 82.9 0.5 1.7E-05 39.3 2.0 22 281-302 87-108 (126)
163 1zrr_A E-2/E-2' protein; nicke 82.8 0.69 2.4E-05 41.7 3.0 22 282-303 124-145 (179)
164 4gjz_A Lysine-specific demethy 82.0 0.63 2.2E-05 42.4 2.5 21 281-301 202-222 (235)
165 1o4t_A Putative oxalate decarb 81.9 0.56 1.9E-05 39.5 1.9 22 281-302 97-118 (133)
166 2xlg_A SLL1785 protein, CUCA; 81.8 0.59 2E-05 44.1 2.2 23 279-301 101-123 (239)
167 3l2h_A Putative sugar phosphat 81.6 0.81 2.8E-05 39.6 2.9 21 281-301 87-108 (162)
168 4b29_A Dimethylsulfoniopropion 81.5 0.83 2.8E-05 42.5 3.1 25 280-304 171-195 (217)
169 2gm6_A Cysteine dioxygenase ty 81.0 20 0.00067 32.7 12.3 82 354-435 70-167 (208)
170 1x82_A Glucose-6-phosphate iso 79.9 0.93 3.2E-05 40.9 2.8 21 281-301 120-140 (190)
171 3ebr_A Uncharacterized RMLC-li 79.1 5.4 0.00018 34.9 7.5 71 361-433 40-114 (159)
172 2vpv_A Protein MIF2, MIF2P; nu 78.9 0.89 3.1E-05 40.5 2.3 22 280-301 128-149 (166)
173 2f4p_A Hypothetical protein TM 78.7 0.86 2.9E-05 39.1 2.1 21 282-302 89-109 (147)
174 2y0o_A Probable D-lyxose ketol 78.5 13 0.00044 33.2 9.8 63 361-423 51-141 (175)
175 1yfu_A 3-hydroxyanthranilate-3 78.0 1 3.5E-05 40.4 2.4 20 281-300 78-97 (174)
176 3eqe_A Putative cystein deoxyg 77.1 30 0.001 30.6 11.8 81 353-435 61-153 (171)
177 1eyb_A Homogentisate 1,2-dioxy 76.4 14 0.00049 37.8 10.6 54 379-432 174-227 (471)
178 3i7d_A Sugar phosphate isomera 74.6 1.7 5.8E-05 38.0 2.9 21 281-301 84-106 (163)
179 1fi2_A Oxalate oxidase, germin 74.0 1.4 4.9E-05 39.8 2.3 21 281-301 120-140 (201)
180 1zvf_A 3-hydroxyanthranilate 3 73.2 1.6 5.6E-05 39.1 2.4 22 279-300 79-100 (176)
181 3kmh_A D-lyxose isomerase; cup 72.9 2.3 7.8E-05 40.0 3.4 35 279-313 171-211 (246)
182 1vrb_A Putative asparaginyl hy 69.6 2.1 7.1E-05 42.4 2.5 24 280-303 218-241 (342)
183 3cjx_A Protein of unknown func 68.6 10 0.00035 33.4 6.6 60 363-423 43-102 (165)
184 2ypd_A Probable JMJC domain-co 68.2 1.9 6.5E-05 43.3 1.8 19 282-300 295-313 (392)
185 2qnk_A 3-hydroxyanthranilate 3 68.1 19 0.00064 34.6 8.6 57 361-418 30-90 (286)
186 3pur_A Lysine-specific demethy 68.1 2.2 7.4E-05 44.7 2.3 22 280-301 366-387 (528)
187 3es1_A Cupin 2, conserved barr 66.3 2.7 9.4E-05 37.5 2.3 20 281-301 119-138 (172)
188 1yll_A PA5104, conserved hypot 66.2 21 0.00071 32.5 8.3 53 381-433 138-194 (200)
189 3fz3_A Prunin; TREE NUT allerg 65.8 3.1 0.00011 43.6 2.9 31 281-311 440-471 (531)
190 2xdv_A MYC-induced nuclear ant 65.5 2.6 9E-05 43.2 2.3 23 280-302 199-221 (442)
191 3pua_A GRC5, PHD finger protei 64.8 2.5 8.7E-05 42.7 2.0 22 280-301 244-265 (392)
192 3k2o_A Bifunctional arginine d 63.5 3.5 0.00012 40.7 2.7 23 280-302 256-278 (336)
193 3al5_A HTYW5, JMJC domain-cont 63.5 3.3 0.00011 40.8 2.5 23 280-302 240-262 (338)
194 2p17_A Pirin-like protein; GK1 62.4 29 0.00098 33.1 8.9 68 362-431 166-239 (277)
195 4diq_A Lysine-specific demethy 62.0 3.2 0.00011 43.1 2.1 24 280-303 228-251 (489)
196 3uss_A Putative uncharacterize 61.5 97 0.0033 28.2 12.8 83 353-435 63-161 (211)
197 3d8c_A Hypoxia-inducible facto 61.0 3.8 0.00013 40.5 2.5 23 280-302 261-283 (349)
198 1j1l_A Pirin; beta sandwich, c 59.3 43 0.0015 32.1 9.6 69 363-431 169-240 (290)
199 3k3o_A PHF8, PHD finger protei 58.6 5.5 0.00019 39.9 3.1 23 280-302 217-239 (371)
200 3kv5_D JMJC domain-containing 57.9 3.9 0.00013 42.5 2.0 23 279-301 335-357 (488)
201 3kv9_A JMJC domain-containing 57.5 4.5 0.00015 40.9 2.3 22 280-301 245-266 (397)
202 1dgw_Y Canavalin; duplicated s 56.9 23 0.0008 28.2 6.0 34 403-436 8-41 (93)
203 3o14_A Anti-ecfsigma factor, C 56.0 22 0.00074 32.8 6.6 66 363-432 43-108 (223)
204 2o1q_A Putative acetyl/propion 55.1 7 0.00024 33.4 2.9 19 281-299 85-103 (145)
205 3st7_A Capsular polysaccharide 54.3 14 0.00046 35.9 5.2 42 382-423 292-341 (369)
206 3kv4_A PHD finger protein 8; e 54.2 7.5 0.00026 39.9 3.3 22 280-301 301-322 (447)
207 3dl3_A Tellurite resistance pr 54.0 45 0.0015 27.8 7.5 54 381-434 36-97 (119)
208 2yu1_A JMJC domain-containing 52.2 10 0.00035 38.9 4.0 23 280-302 266-288 (451)
209 1dgw_Y Canavalin; duplicated s 50.6 15 0.0005 29.4 3.9 41 282-322 8-51 (93)
210 3gbg_A TCP pilus virulence reg 47.7 8.6 0.00029 35.7 2.4 22 281-302 50-71 (276)
211 2qdr_A Uncharacterized protein 40.5 85 0.0029 29.9 7.9 66 363-432 91-159 (303)
212 3esg_A HUTD, putative uncharac 40.4 1.2E+02 0.0041 27.3 8.8 47 381-431 141-188 (193)
213 3es4_A Uncharacterized protein 39.3 12 0.0004 31.2 1.7 19 281-299 81-99 (116)
214 3bal_A Acetylacetone-cleaving 35.8 65 0.0022 27.9 6.0 58 361-418 44-103 (153)
215 2q1z_B Anti-sigma factor CHRR, 34.6 20 0.00068 32.2 2.6 20 283-302 162-181 (195)
216 3ocp_A PRKG1 protein; serine/t 33.3 1.1E+02 0.0039 24.2 7.0 51 382-432 63-119 (139)
217 3d0j_A Uncharacterized protein 32.8 40 0.0014 28.9 4.0 33 280-312 76-110 (140)
218 3eln_A Cysteine dioxygenase ty 30.6 2.9E+02 0.01 24.6 11.1 69 354-423 62-144 (200)
219 1vp6_A CNBD, cyclic-nucleotide 30.4 83 0.0028 24.9 5.6 62 370-432 39-105 (138)
220 3pna_A CAMP-dependent protein 30.3 1.3E+02 0.0045 24.4 7.0 51 382-432 78-134 (154)
221 3qq5_A Small GTP-binding prote 28.8 14 0.00047 37.5 0.5 44 262-305 293-336 (423)
222 3g7d_A PHPD; non heme Fe(II) d 28.7 3.1E+02 0.011 27.0 9.9 69 360-429 331-404 (443)
223 3bpz_A Potassium/sodium hyperp 25.8 1E+02 0.0035 26.6 5.7 50 383-432 113-168 (202)
224 3cjx_A Protein of unknown func 25.7 21 0.00072 31.3 1.1 20 283-302 83-102 (165)
225 2d93_A RAP guanine nucleotide 24.6 1.2E+02 0.0041 23.9 5.6 29 383-411 58-87 (134)
226 3kmh_A D-lyxose isomerase; cup 24.2 2.5E+02 0.0084 26.2 8.0 39 385-423 156-194 (246)
227 4f8a_A Potassium voltage-gated 24.0 1.5E+02 0.0053 23.8 6.3 51 382-432 67-125 (160)
228 3ebr_A Uncharacterized RMLC-li 24.0 39 0.0013 29.3 2.5 21 283-303 81-101 (159)
229 2pa7_A DTDP-6-deoxy-3,4-keto-h 22.7 3.3E+02 0.011 22.9 8.1 51 382-432 55-112 (141)
230 2ptm_A Hyperpolarization-activ 22.2 2.6E+02 0.0088 23.7 7.7 50 383-432 112-168 (198)
231 2ypd_A Probable JMJC domain-co 21.1 97 0.0033 31.0 4.9 34 402-435 294-328 (392)
232 3bb6_A Uncharacterized protein 20.9 2.6E+02 0.0089 23.4 6.8 52 382-433 38-98 (127)
233 1yud_A Hypothetical protein SO 20.4 4.3E+02 0.015 23.1 9.8 34 405-438 101-137 (170)
No 1
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=100.00 E-value=1.2e-95 Score=757.38 Aligned_cols=405 Identities=41% Similarity=0.704 Sum_probs=347.1
Q ss_pred ccEEeeccccccccCCCCCchHHHHHhcC-CCCCCCCCCCCceeeeeeecCCCCeEEecCCCCCccccccccCCCCCCCC
Q 013464 10 RLLRLTCSVQKYDWGRTGSDSLVSKLYGL-NSGKRTDIDKPYAEFWMGTHESGPSFLAKKGGAGGVAGAVVNGSSANGGC 88 (442)
Q Consensus 10 ~~~~l~p~~~~y~WG~~~~~sll~~l~~~-~~~~~~~~~~p~aE~W~g~Hp~~pS~v~~~~~~~~~~~~~~~~~~~~~~~ 88 (442)
+|++|+|.+|+|+|||+|+.+++++|.+. ++++++++++||||+|||+||++||+|.++
T Consensus 4 ~~~~l~p~~~~~~WGg~Gs~~l~~~l~~~~~~~~~~~~~~~~aE~W~g~hp~~~S~v~~~-------------------- 63 (440)
T 1pmi_A 4 KLFRIQCGYQNYDWGKIGSSSAVAQFVHNSDPSITIDETKPYAELWMGTHPSVPSKAIDL-------------------- 63 (440)
T ss_dssp SEEEEEECEECCTTBEEGGGSHHHHHHHHHCTTSCCCTTSEECEEEESCCTTSCEEETTT--------------------
T ss_pred ccEEeecccCcCCCCCCchHHHHHHHhcCCCccccCCCCCCEEEEEEEecCCCCeEEeCC--------------------
Confidence 69999999999999999877899898742 334667667899999999999999999752
Q ss_pred CccccHHHHHhhCCC-cCCchhhhhcCC--CCCceeeeeecCCCCccccCCCHHHHHHhcCcCCCCCCCCCCCceeEEEc
Q 013464 89 GEIVSLKSWILKNPN-VLGDKVLHRWGC--DLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAI 165 (442)
Q Consensus 89 ~~~~~L~~li~~~p~-~lG~~~~~~~g~--~lP~L~KvLda~~~LSIQVHPd~~~A~~~~~~~~~~Y~D~n~KpE~w~aL 165 (442)
.|.+|.++|+++|. +||+...++||. +||||+||||++++|||||||||++|+++|+++|+||||+||||||||||
T Consensus 64 -~G~~L~~~i~~~~~~llG~~~~~~fg~~~~~P~L~K~Lda~~~LSiQvHPd~~~A~~~~~~~p~~YkD~ngKpE~~y~L 142 (440)
T 1pmi_A 64 -NNQTLRDLVTAKPQEYLGESIITKFGSSKELPFLFKVLSIEKVLSIQAHPDKKLGAQLHAADPKNYPDDNHKPEMAIAV 142 (440)
T ss_dssp -TTEEHHHHHHHCHHHHTCHHHHHHHCCSSSCSEEEEEEEESSCCCEEECCCHHHHHHHHHHCTTTCCSSCCCCEEEEES
T ss_pred -CCCCHHHHHHhChHhhcCchhhhhcCCcccCcEEEhhhccCCCCceeeCcCHHHHHHhhcccccccCCCCCCcEEEEEc
Confidence 25799999999976 999999999998 89999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCcHHHHHHHhccCcchhhhhcchhhhhhhhhhc---cccc---hhHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 013464 166 TEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEM---QDGE---EKAKFVLQSIFTNLMTASMEMTTKATTK 239 (442)
Q Consensus 166 t~f~al~GFr~~~ei~~~L~a~p~~~~~~G~~~~~~~~~~~~---~~~~---~~~~~~L~~~f~~~~~~~~e~~~~~i~~ 239 (442)
+.|++|||||+.+||...|+..|+++.++|.....+|..... .+.+ ..+++.||++|+.+|++++++++++|++
T Consensus 143 ~~~~~~~Gf~~~~ei~~~l~~~pel~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~~f~~lm~~~~~~~~~~v~~ 222 (440)
T 1pmi_A 143 TDFEGFCGFKPLDQLAKTLATVPELNEIIGQELVDEFISGIKLPAEVGSQDDVNNRKLLQKVFGKLMNTDDDVIKQQTAK 222 (440)
T ss_dssp SCEEEEEEECCHHHHHHHHHHCHHHHHHHCHHHHHHHHHHCCCSCCTTSHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred cchhhhhcCCcHHHHHHHHhhchhhhhhhchhhhhhhhhhcccccccccccccccHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999999999999765544432111 0110 2468999999999999999999999999
Q ss_pred HHHHhhhccCC--CCcchHHHHHHHHHhhCCCCcccch-hhcceeeECCCCCEEEecCCCceeeecCcEEEEeecCCceE
Q 013464 240 LKSRLHKESQV--RPLTEKEQLVLRLEKQYPADIGVIA-AFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVV 316 (442)
Q Consensus 240 l~~~~~~~~~~--~~~~~~~~~~~~l~~~yp~D~G~~~-~~~Ln~v~l~pGd~i~ipaGt~HAy~~G~~vEim~~SDnt~ 316 (442)
|++++...... .......++++||+++||+|+|+|+ ++|||+++|+|||+||||||+||||++|+||||||||||||
T Consensus 223 l~~~~~~~~~~~~~~~~~~~~~i~~L~~~yP~D~G~~~~~~lLN~v~L~pGea~flpAg~~HAYl~G~~vE~Ma~SDNV~ 302 (440)
T 1pmi_A 223 LLERTDREPQVFKDIDSRLPELIQRLNKQFPNDIGLFCGCLLLNHVGLNKGEAMFLQAKDPHAYISGDIIECMAASDNVV 302 (440)
T ss_dssp HHHHHHHCHHHHHTTCTTHHHHHHHHHHHSTTCTHHHHTTTTEEEEEECTTCEEEECTTCCEEEEEEEEEEEEESCCCCE
T ss_pred HHHHHHhhccccccccchHHHHHHHHHHHCCCCccceehhhhcceEecCCCCEEecCCCCccccCCCcEEEEeccCCcEE
Confidence 98888641000 0001257899999999999999999 99999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCChhHhhccccccCCCccc--cccccCC-----C-cEEEECCCCCceEEEEEEeCC--CCeeeccCCCCeEE
Q 013464 317 RAGLTPKHRDVQTLCSMLTYKQGFPEI--LKGFPLS-----P-YITRYLPPFDEFEVDCCILPK--GTSSVFPAVSGPSI 386 (442)
Q Consensus 317 R~glt~k~~dv~~ll~~l~~~~~~~~~--~~~~~~~-----~-~~~~y~~p~~~F~l~~i~~~~--~~~~~~~~~~~~~i 386 (442)
|+|+|||++|++++++|++|++.++.. +.+.+.. + ....|.+|+++|++.++++.+ +....+....+++|
T Consensus 303 RaGlTpK~~Dv~~Ll~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~y~~P~~eF~v~~~~~~~~~~~~~~~~~~~~~~i 382 (440)
T 1pmi_A 303 RAGFTPKFKDVKNLVEMLTYSYESVEKQKMPLQEFPRSKGDAVKSVLYDPPIAEFSVLQTIFDKSKGGKQVIEGLNGPSI 382 (440)
T ss_dssp EEESCSSCCCHHHHHHHCCCCCCCGGGGBCCCBCCTTEEESCSEEEEECCSSSSCEEEEEECCTTTCCEEEECCCSSCEE
T ss_pred ecCCCccccCHHHHHHhccccCCCcccccccceeccccccCCcceEEECCCCCeEEEEEEEecCCCCceeEEecCCCcEE
Confidence 999999999999999999998876654 2333221 2 367899999999999999973 43444445689999
Q ss_pred EEEEcCcEEEEeCCc-E--EEeCcccEEEEcCCCcEEEEec-----CcEEEEEEEcC
Q 013464 387 FLVTDGEGSMLTASH-N--DAVAEGDVLFAPANTEINITTS-----SKLQLYRAGVN 435 (442)
Q Consensus 387 l~v~~G~~~i~~~~~-~--~~l~~G~~~~Ipa~~~~~i~~~-----~~~~~~~a~~~ 435 (442)
++|++|+++|..++. . ..|++|+++||||+..+++++. +.+++|+|++.
T Consensus 383 llv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~~ 439 (440)
T 1pmi_A 383 VIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFVE 439 (440)
T ss_dssp EEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEECC
T ss_pred EEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEec
Confidence 999999999988654 3 8999999999999966999873 46999999986
No 2
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=100.00 E-value=8.2e-96 Score=750.50 Aligned_cols=374 Identities=33% Similarity=0.513 Sum_probs=325.0
Q ss_pred cEEeeccccccccCCCCCchHHHHHhcCCCCCCCCCCCCceeeeeeecCCCCeEEecC-CCCCccccccccCCCCCCCCC
Q 013464 11 LLRLTCSVQKYDWGRTGSDSLVSKLYGLNSGKRTDIDKPYAEFWMGTHESGPSFLAKK-GGAGGVAGAVVNGSSANGGCG 89 (442)
Q Consensus 11 ~~~l~p~~~~y~WG~~~~~sll~~l~~~~~~~~~~~~~p~aE~W~g~Hp~~pS~v~~~-~~~~~~~~~~~~~~~~~~~~~ 89 (442)
|++|+|.+|+|+||++. +++++++. +.++++||||+|||+||++||+|.++ |
T Consensus 4 ~~~l~~~~~~y~WG~~~---~l~~l~g~----~~~~~~p~aE~W~gaHp~gpS~v~~~~G-------------------- 56 (394)
T 2wfp_A 4 MQKLINSVQNYAWGSKT---ALTELYGI----ANPQQQPMAELWMGAHPKSSSRITTANG-------------------- 56 (394)
T ss_dssp EEECBCEEECCTTBBSS---HHHHHHCC----CCTTCCCBCEEEESCCTTSCCEECC-----------------------
T ss_pred cEEcccccCCCCCCChh---HHHHHhCC----CCCCCCCeeEEEEEecCCCceEeecCCC--------------------
Confidence 89999999999999864 78998853 33457899999999999999999763 2
Q ss_pred ccccHHHHHhhCCC-cCCchhhhhcCCCCCceeeeeecCCCCccccCCCHHHHHHhcCcC----------CCCCCCCCCC
Q 013464 90 EIVSLKSWILKNPN-VLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLL----------PNVYKDDNHK 158 (442)
Q Consensus 90 ~~~~L~~li~~~p~-~lG~~~~~~~g~~lP~L~KvLda~~~LSIQVHPd~~~A~~~~~~~----------~~~Y~D~n~K 158 (442)
++++|.++|++||+ +||+...++||. |||||||||++++|||||||||++|+++|+.+ ||||||+|||
T Consensus 57 ~~~~L~~li~~~p~~~LG~~~~~~fg~-lP~L~KvLda~~~LSIQvHPd~~~A~~~f~~e~~~Gi~~~~~~~~Y~D~nhK 135 (394)
T 2wfp_A 57 ETVSLRDAIEKNKTAMLGEAVANRFGE-LPFLFKVLCAAQPLSIQVHPNKRNSEIGFAKENAAGIPMDAAERNYKDPNHK 135 (394)
T ss_dssp --EEHHHHHHHCHHHHHCHHHHHHTSS-CCCEEEEEEESSCCCCEECCCHHHHHHHHHHHHHTTCCTTSTTCCBCCSSCC
T ss_pred CccCHHHHHHhCHHHhcCcchhhhcCC-CcEEEeeeccCCCcccccCcCHHHHHHHhhhhhcccccccccccccCCCCCC
Confidence 36799999999999 999999999997 99999999999999999999999999988654 8999999999
Q ss_pred ceeEEEccchhhhcCCCcHHHHHHHhccCcchhhhh-cchhhhhhhhhhccccchhHHHHHHHHHHHHhcCCHHHHHHHH
Q 013464 159 PEMALAITEFEALCSFISLQELKSVLQNVPEIVELV-GSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKAT 237 (442)
Q Consensus 159 pE~w~aLt~f~al~GFr~~~ei~~~L~a~p~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~L~~~f~~~~~~~~e~~~~~i 237 (442)
||||||||+|+|||||||.+||..+|++.|+++.++ |+... .+++.||++|+.+|+.+.++.++++
T Consensus 136 pE~~yaLt~f~al~GFr~~~ei~~~l~~~p~~~~l~~~~~~~-------------~~~~~l~~~f~~~~~~~~~~~~~~~ 202 (394)
T 2wfp_A 136 PELVFALTPFLAMNAFREFSDIVSLLQPVAGAHSAIAHFLQV-------------PNAERLSQLFASLLNMQGEEKSRAL 202 (394)
T ss_dssp CEEEEESSCEEEEEEECCHHHHHHHHGGGGGGCHHHHHHHHS-------------CSHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred cEEEEEccchhhhcCCCCHHHHHHHhhcChhHHHHHHHhhcC-------------ccHHHHHHHHHHHHcCCcccHHHHH
Confidence 999999999999999999999999999999997544 43221 2578999999999999999999999
Q ss_pred HHHHHHhhhccCCCCcchHHHHHHHHHhhCCCCcccchhhcceeeECCCCCEEEecCCCceeeecCcEEEEeecCCceEE
Q 013464 238 TKLKSRLHKESQVRPLTEKEQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVR 317 (442)
Q Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~yp~D~G~~~~~~Ln~v~l~pGd~i~ipaGt~HAy~~G~~vEim~~SDnt~R 317 (442)
+.|.+++..... . ...++.+|++|||+|+|+|++++||+++|+|||+|||||||+|||++|+++|||||||||||
T Consensus 203 ~~l~~~~~~~~~--~---~~~~i~~l~~~yp~D~G~~~~~lLn~v~l~pGd~~fipAG~~HAy~~G~~~Eima~SDnv~R 277 (394)
T 2wfp_A 203 AVLKAALNSQQG--E---PWQTIRVISEYYPDDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLR 277 (394)
T ss_dssp HHHHHHHHHCCS--T---THHHHHHHHHHCTTCGGGGHHHHEEEEEECTTCEEEECTTCCEEEEEEEEEEEECSSCBCEE
T ss_pred HHHHHHHhcccc--c---hHHHHHHHHHHCCCCchhhHHhhheEEECCCCCEEEcCCCCceEcCCCcEEEEeccCCcEEE
Confidence 998887764211 2 45789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCChhHhhccccccCCCc--cccccccCCCcEEEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEE
Q 013464 318 AGLTPKHRDVQTLCSMLTYKQGFP--EILKGFPLSPYITRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGS 395 (442)
Q Consensus 318 ~glt~k~~dv~~ll~~l~~~~~~~--~~~~~~~~~~~~~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~ 395 (442)
+|+|||++|++++++|++|+..++ ..+.+.+ .+....|.+|+++|++.+++++++ ...+ ..++++|++|++|+++
T Consensus 278 ~gltpk~~dv~~ll~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~F~v~~~~l~~~-~~~~-~~~~~~il~v~~G~~~ 354 (394)
T 2wfp_A 278 AGLTPKYIDIPELVANVKFEPKPAGELLTAPVK-SGAELDFPIPVDDFAFSLHDLALQ-ETSI-GQHSAAILFCVEGEAV 354 (394)
T ss_dssp CSSCSSCCCHHHHHHTCCCCBCCGGGSSCCCEE-ETTEEECCCSSSSCEEEEEECCSS-CEEE-CCSSCEEEEEEEEEEE
T ss_pred cCCcCCccCHHHHhhhccccCCCcccccccccc-CCceEEEeCCCCEEEEEEEEEcCC-eEEe-cCCCcEEEEEEeceEE
Confidence 999999999999999999988763 2222222 245678989999999999999754 3343 4678999999999999
Q ss_pred EEeCCcEEEeCcccEEEEcCCCc-EEEEecCcEEEEEEEcC
Q 013464 396 MLTASHNDAVAEGDVLFAPANTE-INITTSSKLQLYRAGVN 435 (442)
Q Consensus 396 i~~~~~~~~l~~G~~~~Ipa~~~-~~i~~~~~~~~~~a~~~ 435 (442)
|..+++++.|++|+++||||+.+ +++++ .++++++++.
T Consensus 355 l~~~~~~~~l~~G~~~fvpa~~~~~~i~g--~~~~~~~~~~ 393 (394)
T 2wfp_A 355 LRKDEQRLVLKPGESAFIGADESPVNASG--TGRLARVYNK 393 (394)
T ss_dssp EEETTEEEEECTTCEEEECGGGCCEEEEE--EEEEEEEECC
T ss_pred EEECCeEEEEccCcEEEEeCCCceEEEEe--eeEEEEEEec
Confidence 99888889999999999999964 99976 6899999864
No 3
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=100.00 E-value=2.3e-72 Score=558.10 Aligned_cols=290 Identities=17% Similarity=0.259 Sum_probs=241.8
Q ss_pred ccEEeeccccccccCCCCCchHHHHHhcCCCCCCCCCCCCceeee-eeecCCCCeEEecCCCCCccccccccCCCCCCCC
Q 013464 10 RLLRLTCSVQKYDWGRTGSDSLVSKLYGLNSGKRTDIDKPYAEFW-MGTHESGPSFLAKKGGAGGVAGAVVNGSSANGGC 88 (442)
Q Consensus 10 ~~~~l~p~~~~y~WG~~~~~sll~~l~~~~~~~~~~~~~p~aE~W-~g~Hp~~pS~v~~~~~~~~~~~~~~~~~~~~~~~ 88 (442)
.|++|+|.+|+|+|||++ |++++| ++++|+||+| ||+||++||+|..+|
T Consensus 7 ~~~~l~p~~~~~~WGG~~----l~~~~g-------~~~~~~aE~W~~~ahp~g~S~v~~~G------------------- 56 (300)
T 1zx5_A 7 FIFQAQENLVERPWGGEW----IALLKG-------FRQSGIGESWEFSAHTSRPSTVLVKG------------------- 56 (300)
T ss_dssp CBEESSCCEEECTTCCSH----HHHHTT-------SCCSCEEEEEESCCCTTSCCEEEETT-------------------
T ss_pred eeEEeecccccCCCChHH----HHHHhC-------CCCCceeEEEEeecccCCceEEeCCC-------------------
Confidence 699999999999999864 777774 2467999999 799999999994333
Q ss_pred CccccHHHHHhhCCC-cCCchhhhhcCCCCCceeeeeecCCCCccccCCCHHHHHHhcCcCCCCCCCCCCCceeEEEccc
Q 013464 89 GEIVSLKSWILKNPN-VLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITE 167 (442)
Q Consensus 89 ~~~~~L~~li~~~p~-~lG~~~~~~~g~~lP~L~KvLda~~~LSIQVHPd~~~A~~~~~~~~~~Y~D~n~KpE~w~aLt~ 167 (442)
.+.+|.++|++||+ +||++ .++|| +||||+||||++++|||||||||++|++++ +|+||||||||||++
T Consensus 57 -~g~~L~~li~~~~~~llG~~-~~~~~-~~P~L~KiLda~~~LSiQVHPd~~~A~~~e-------~~~~gKpE~~y~L~~ 126 (300)
T 1zx5_A 57 -QQLSMIELFSKHRDELLGRA-AEKFS-KFPILVRLIDAASPTQVHVHPSDKAAESLG-------EAEGGVESAWLVFNK 126 (300)
T ss_dssp -EEEEHHHHHHHHHHHHHBTT-TTTCS-SCCEEEEEEEECSCCCCEECCCHHHHHHTT-------CSSCCCCEEEEECSS
T ss_pred -CCCCHHHHHHhChHHHcCcc-hhccC-CCCeEEEeecCCCCCCeeECcChHHHHHhc-------CCCCCCcEEEEEccc
Confidence 25799999999997 99998 77887 799999999999999999999999999976 346999999999999
Q ss_pred hhhhcCCCcHHHHHHHhccCcchhhhhcchhhhhhhhhhccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 013464 168 FEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKE 247 (442)
Q Consensus 168 f~al~GFr~~~ei~~~L~a~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~L~~~f~~~~~~~~e~~~~~i~~l~~~~~~~ 247 (442)
|+++||||+..+ +++++++ +++
T Consensus 127 ~~~~~Gf~~~~~--------------------------------------------------~~~~~~~-------l~~- 148 (300)
T 1zx5_A 127 GKAYAGFKEDVK--------------------------------------------------IEELEEK-------LKE- 148 (300)
T ss_dssp CEEEEEESSCCC--------------------------------------------------HHHHHHH-------HTS-
T ss_pred HHHhhCCCCCCC--------------------------------------------------HHHHHHH-------HHh-
Confidence 999999998532 2222222 211
Q ss_pred cCCCCcchHHHHHHHHHhhCCCCcccchhhcceeeECCCCCEEEecCCCceeeecCcEEEEeecCCceEEcCCCCCCCCh
Q 013464 248 SQVRPLTEKEQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDV 327 (442)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~~yp~D~G~~~~~~Ln~v~l~pGd~i~ipaGt~HAy~~G~~vEim~~SDnt~R~glt~k~~dv 327 (442)
+ +++ + ..+||+++|+|||++||||||+|||++|+++|||||||||| |||++|+
T Consensus 149 -~--~~~-~-------------------~~lLn~v~l~pGd~~~ipaGt~HA~~~G~~~Eiqa~SD~t~----~pr~l~v 201 (300)
T 1zx5_A 149 -E--DFD-F-------------------KTLLNTFETTPYDTFVIRPGIPHAGEGLRVLEVSSNSTLAY----FFNENDW 201 (300)
T ss_dssp -S--SCC-G-------------------GGGEEEEECCTTCEEEECTTCCEEEESEEEEEEEESCCCCE----ESSTTTH
T ss_pred -C--chh-H-------------------HHHhceeECCCCCEEEcCCCCceEcCCCCeeeecccCCcee----ecccCCH
Confidence 2 210 1 38999999999999999999999999999999999999999 9999999
Q ss_pred hHhhccccccCCCccccccccCCCcEEEECCCCCceEEEEEEeCCCCeeeccCCCCe-EEEEEEcCcEEEEeCCcEEEeC
Q 013464 328 QTLCSMLTYKQGFPEILKGFPLSPYITRYLPPFDEFEVDCCILPKGTSSVFPAVSGP-SIFLVTDGEGSMLTASHNDAVA 406 (442)
Q Consensus 328 ~~ll~~l~~~~~~~~~~~~~~~~~~~~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~-~il~v~~G~~~i~~~~~~~~l~ 406 (442)
+++++|++|+..++.... ...|.+|+++|++.++++++.. .+.. +++ +|++|++| ++|..+++...++
T Consensus 202 ~~~~~vl~~~~~~~~~~~-------~~~~~~~~~~F~v~~~~~~~~~--~~~~-~~~~~il~v~~G-~~i~~~~~~~~l~ 270 (300)
T 1zx5_A 202 EKVKKVLNTKKVEEFEVK-------GKKGMAETENFGLEVVDVTGTA--EIKT-GGVMNILYAAEG-YFILRGKETADLH 270 (300)
T ss_dssp HHHHHHCCCSBCCGGGTB-------CBTTEEECSSEEEEEEEEEEEE--EEEC-CSBCEEEEEEES-CEEEESSSEEEEC
T ss_pred HHHHhhccccCCCccccc-------eeEEcCCCCeEEEEEEEECCce--EEec-CCceEEEEEccc-EEEEeCCeEEEEc
Confidence 999999999877653221 1223456899999999997533 3345 889 99999999 9999877889999
Q ss_pred cccEEEEcCCCc-EEEEecCcEEEEEEEcCC
Q 013464 407 EGDVLFAPANTE-INITTSSKLQLYRAGVNS 436 (442)
Q Consensus 407 ~G~~~~Ipa~~~-~~i~~~~~~~~~~a~~~~ 436 (442)
+|+++||||+.+ ++++++ +++++++|+.+
T Consensus 271 ~G~~~~ipa~~~~~~i~g~-~~~~~~a~~~~ 300 (300)
T 1zx5_A 271 RGYSCLVPASTDSFTVESE-RGKIVRIYLKV 300 (300)
T ss_dssp TTCEEEECTTCCEEEEEEE-EEEEEEEEECC
T ss_pred cceEEEEeCCCceEEEEeC-ceEEEEEEEcC
Confidence 999999999986 999752 68999999764
No 4
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=100.00 E-value=6.5e-71 Score=552.48 Aligned_cols=302 Identities=20% Similarity=0.225 Sum_probs=249.1
Q ss_pred cccEEeeccccccccCCCCCchHHHHHhcCCCCCCCCCCCCceeee-eeecCCCCeEEecCCCCCccccccccCCCCCCC
Q 013464 9 RRLLRLTCSVQKYDWGRTGSDSLVSKLYGLNSGKRTDIDKPYAEFW-MGTHESGPSFLAKKGGAGGVAGAVVNGSSANGG 87 (442)
Q Consensus 9 ~~~~~l~p~~~~y~WG~~~~~sll~~l~~~~~~~~~~~~~p~aE~W-~g~Hp~~pS~v~~~~~~~~~~~~~~~~~~~~~~ 87 (442)
..|++|+|.+|+|+|||++ ++++++ ++++ ++|+||+| ||+||++||+|.++.
T Consensus 6 ~~~~~l~p~~~~~~WGg~~----l~~~~g----~~~~-~~~~aE~W~~~ahp~g~S~v~~g~------------------ 58 (319)
T 1qwr_A 6 QSPIFLTPVFKEKIWGGTA----LRDRFG----YSIP-SESTGECWAISAHPKGPSTVANGP------------------ 58 (319)
T ss_dssp CSCEEEECEEEEEEEEESH----HHHHHC----CCCS-SSSEEEEEEECCCTTSCCEECSST------------------
T ss_pred CccEEeccccCCCCCChHH----HHHHhC----CCCC-CCCcceEEEeecccCCCeEEeCCc------------------
Confidence 5799999999999999864 778774 3444 67999999 899999999998543
Q ss_pred CCccccHHHHHhhCCCcCCchhhhhcCCCCCceeeeeecCCCCccccCCCHHHHHHhcCcCCCCCCCCCCCceeEEEccc
Q 013464 88 CGEIVSLKSWILKNPNVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITE 167 (442)
Q Consensus 88 ~~~~~~L~~li~~~p~~lG~~~~~~~g~~lP~L~KvLda~~~LSIQVHPd~~~A~~~~~~~~~~Y~D~n~KpE~w~aLt~ 167 (442)
+++++|.++|+++|++||+.. +.+||||+||||++++|||||||||++|+++++ |+||||||||||+.
T Consensus 59 -~~g~~L~~li~~~~~llG~~~----~~~~P~L~KiLda~~~LSiQvHPd~~~A~~~e~-------~~~gKpE~~y~L~~ 126 (319)
T 1qwr_A 59 -YKGKTLIELWEEHREVFGGVE----GDRFPLLTKLLDVKEDTSIKVHPDDYYAGENEE-------GELGKTECWYIIDC 126 (319)
T ss_dssp -TTTCBHHHHHHHCGGGGTTCC----CSSCCEEEEEEEESSCCCEEECCCHHHHHHHTT-------TCCCCCEEEEEEEE
T ss_pred -cCCCCHHHHHHhCHHHhCCCc----cCcCceEEeeeccCCCcCcccCcCHHHHHHhcC-------CCCCCCEEEEEccC
Confidence 247899999999999999864 358999999999999999999999999999872 46999999999754
Q ss_pred hhhhcCCCcHHHHHHHhccCcchhhhhcchhhhhhhhhhccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 013464 168 FEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKE 247 (442)
Q Consensus 168 f~al~GFr~~~ei~~~L~a~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~L~~~f~~~~~~~~e~~~~~i~~l~~~~~~~ 247 (442)
.|++..++|... .+++++++++++
T Consensus 127 -------------------~~~~~~~~G~~~-----------------------------~~~e~l~~~i~~-------- 150 (319)
T 1qwr_A 127 -------------------KENAEIIYGHTA-----------------------------RSKTELVTMINS-------- 150 (319)
T ss_dssp -------------------CTTCEEEEEECC-----------------------------SSHHHHHHHHHT--------
T ss_pred -------------------CCchhheeCCCC-----------------------------CCHHHHHHHHHc--------
Confidence 457777888432 245565554433
Q ss_pred cCCCCcchHHHHHHHHHhhCCCCcccchhhcceeeECCCCCEEEecCCCceeeecCc-EEEEeecCCceEEc------CC
Q 013464 248 SQVRPLTEKEQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGE-CIECMATSDNVVRA------GL 320 (442)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~~yp~D~G~~~~~~Ln~v~l~pGd~i~ipaGt~HAy~~G~-~vEim~~SDnt~R~------gl 320 (442)
+ + +. ++||+++|+|||+|||||||+|||++|+ ++|||||||||||+ |+
T Consensus 151 -~--~---~~-------------------~lLn~v~l~pGd~~~ipaGt~HA~~~G~~~~Eiq~~SD~t~R~yDy~R~g~ 205 (319)
T 1qwr_A 151 -G--D---WE-------------------GLLRRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDATYRVYDYDRLDS 205 (319)
T ss_dssp -T--C---HH-------------------HHEEEEECCTTCEEEECTTCCEEECSSEEEEEEEESCCCCEEEECTTCBCT
T ss_pred -C--C---HH-------------------HhceEEEcCCCCEEEcCCCCceEecCCCeEEEEEeCCccEEEcccccccCC
Confidence 3 3 43 8999999999999999999999999999 59999999999998 99
Q ss_pred C--CCCCChhHhhccccccCCCccccccccC-CCcEEEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEE
Q 013464 321 T--PKHRDVQTLCSMLTYKQGFPEILKGFPL-SPYITRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSML 397 (442)
Q Consensus 321 t--~k~~dv~~ll~~l~~~~~~~~~~~~~~~-~~~~~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~ 397 (442)
| +|++|++++++|++|+..++....+... .+....|.+++++|++.+++++++.. +...++|+|++|++|+++|.
T Consensus 206 ~g~pr~lhv~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~~~--~~~~~~~~il~v~~G~~~l~ 283 (319)
T 1qwr_A 206 NGSPRELHFAKAVNAATVPHVDGYIDESTESRKGITIKTFVQGEYFSVYKWDINGEAE--MAQDESFLICSVIEGSGLLK 283 (319)
T ss_dssp TSCBCCCCHHHHHHHSCSSCCCCCCCCEEEEETTEEEEEEEECSSCEEEEEEEEEEEE--ECCCSSCEEEEEEEEEEEEE
T ss_pred CCCcccCCHHHHHhhccccCCCcccccceeecCCceEEEeCCCCEEEEEEEEECCceE--EccCCccEEEEEEcCeEEEE
Confidence 9 7778999999999998876543222112 23355676789999999999975433 33457899999999999998
Q ss_pred eCCcEEEeCcccEEEEcCCCc-EEEEecCcEEEEEEEc
Q 013464 398 TASHNDAVAEGDVLFAPANTE-INITTSSKLQLYRAGV 434 (442)
Q Consensus 398 ~~~~~~~l~~G~~~~Ipa~~~-~~i~~~~~~~~~~a~~ 434 (442)
.+++.+.|++|+++||||+.+ +++++ ++++++++.
T Consensus 284 ~~~~~~~l~~G~~~~vpa~~~~~~i~g--~~~~~~~~~ 319 (319)
T 1qwr_A 284 YEDKTCPLKKGDHFILPAQMPDFTIKG--TCTLIVSHI 319 (319)
T ss_dssp ETTEEEEEETTCEEEECTTCCCEEEEE--EEEEEEEEC
T ss_pred ECCEEEEEcCCcEEEEeCCCceEEEEe--ceEEEEEEC
Confidence 877789999999999999985 99975 689999873
No 5
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.90 E-value=2.3e-08 Score=94.61 Aligned_cols=141 Identities=18% Similarity=0.161 Sum_probs=91.8
Q ss_pred eeECCCCCEEEecCCCceeeecC--cE-EEEeecC-Cce-----EEcCCCCCCCChhHhhccccccCCCccccccccCCC
Q 013464 281 YVKLNPGQALYLGANEPHAYISG--EC-IECMATS-DNV-----VRAGLTPKHRDVQTLCSMLTYKQGFPEILKGFPLSP 351 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~G--~~-vEim~~S-Dnt-----~R~glt~k~~dv~~ll~~l~~~~~~~~~~~~~~~~~ 351 (442)
...|++||.+|+|||++|++... .. +||+-.- |.. +|.-.+++..++.+ .+.|.... . .
T Consensus 76 ~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~~~~~~~~~~~~~~~~l~~~~~~~~~d---~~~~~~g~--~-------~ 143 (227)
T 3rns_A 76 KKTISNGDFLEITANHNYSIEARDNLKLIEIGEKIGDGNMENKTLKMLESASAFNLAE---VVEYQEGK--I-------V 143 (227)
T ss_dssp EEEEETTEEEEECSSCCEEEEESSSEEEEEEEECC----------------CCEESGG---GSCCCTTC--E-------E
T ss_pred EEEECCCCEEEECCCCCEEEEECCCcEEEEEEeecccchhhhhHhhcCCccccCcHHH---ccccCCCC--E-------E
Confidence 35799999999999999998543 22 5774431 111 11111111111111 11111100 0 0
Q ss_pred cEEEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe-cCcEEEE
Q 013464 352 YITRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT-SSKLQLY 430 (442)
Q Consensus 352 ~~~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~ 430 (442)
...++. .+.|.+..+.+++|.....-......+++|++|++++..+++.+.+++||++++|++..-.+.+ .++++++
T Consensus 144 ~~~l~~--~~~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~l 221 (227)
T 3rns_A 144 SKNLVA--KPNLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYVDGKPFIVKKGESAVLPANIPHAVEAETENFKML 221 (227)
T ss_dssp EEEEEE--ETTEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTSCEEEECCSSCEEEE
T ss_pred EEEEEE--CCCeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCEEEE
Confidence 123343 4679999999998876544445567899999999999999999999999999999999877777 7788887
Q ss_pred EEEcC
Q 013464 431 RAGVN 435 (442)
Q Consensus 431 ~a~~~ 435 (442)
...+.
T Consensus 222 l~~v~ 226 (227)
T 3rns_A 222 LILVK 226 (227)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76653
No 6
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.43 E-value=4.5e-06 Score=79.44 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=62.1
Q ss_pred CCceEEEEEEeCC-CCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCC
Q 013464 360 FDEFEVDCCILPK-GTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVNS 436 (442)
Q Consensus 360 ~~~F~l~~i~~~~-~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~ 436 (442)
...|.+....+.+ |.....-....-.+++|++|++++..+++.+.+++||++++|++..-.+.+ ++.+.++..+.|.
T Consensus 142 ~~~~~~~~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 142 EDWVEIMLAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp ETTEEEEEEEECTTTEEEEEECCSSEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred cceeEEEEEEECCCCCcCCCEeCCCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 3558888888887 654443345567899999999999999999999999999999998855654 4668888888776
Q ss_pred C
Q 013464 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
+
T Consensus 222 ~ 222 (243)
T 3h7j_A 222 R 222 (243)
T ss_dssp S
T ss_pred h
Confidence 5
No 7
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.20 E-value=5.2e-05 Score=73.37 Aligned_cols=143 Identities=14% Similarity=0.089 Sum_probs=83.6
Q ss_pred eeECCCCCEEEecCCCceeeec-CcE-EEEeecCCceEEcCCCCCCCChhHhhccccccCCCccccccccCC-Cc-EEEE
Q 013464 281 YVKLNPGQALYLGANEPHAYIS-GEC-IECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQGFPEILKGFPLS-PY-ITRY 356 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~-G~~-vEim~~SDnt~R~glt~k~~dv~~ll~~l~~~~~~~~~~~~~~~~-~~-~~~y 356 (442)
...|++||++|+|+|++|+|-. |+- +.+.- +.+........ ..-..+.+.+..++.. .+.. +. .+.+
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~----v~~~y~~~~g~--~p~~~v~~~~d~~~~~---~~~~~g~~~~~l 173 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQEADTEVFL----YKKRYQPLAGH--QPYKVVGSIHDQQPEE---YEGMTDVLLWSL 173 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSSSCEEEEE----EEEECCCCTTC--CCCCEEEEGGGSCCEE---GGGCTTEEEEEC
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE----EEeeeeeCCCC--CCcceeCChHHCCccc---cCCCCCeEEEEe
Confidence 4579999999999999999863 322 22221 11111100000 0000111111111100 0111 11 1222
Q ss_pred CC--CCCceEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--c-CcEEEE
Q 013464 357 LP--PFDEFEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--S-SKLQLY 430 (442)
Q Consensus 357 ~~--p~~~F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~-~~~~~~ 430 (442)
.+ ....|.+..+++.++..... -......+++|++|++++..+++.+.|++||+++||++..-.+.+ + ..++++
T Consensus 174 ~~~~~~~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 174 LPKEFDFDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp SCSSTTCSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCcccCCCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 22 23478999999988765433 234567899999999999999999999999999999999755554 3 445554
Q ss_pred EE
Q 013464 431 RA 432 (442)
Q Consensus 431 ~a 432 (442)
..
T Consensus 254 ~~ 255 (274)
T 1sef_A 254 YS 255 (274)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 8
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.13 E-value=3.9e-05 Score=74.66 Aligned_cols=72 Identities=13% Similarity=0.115 Sum_probs=56.8
Q ss_pred CCceEEEEEEeCCCCeeecc-CCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFP-AVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYR 431 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~-~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~ 431 (442)
..+|.+..+++.+|...... ...--..++|++|++++..+++...|++||+++++++..-.+.+ +++++.+.
T Consensus 188 ~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~ 262 (278)
T 1sq4_A 188 RHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLL 262 (278)
T ss_dssp TCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETTEEEEEETTCEEEEEESCCEEEECCSSSCEEEEE
T ss_pred CCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCCEEEEcCCCCCEEEEE
Confidence 45799999999988765432 22335789999999999999999999999999999999877776 34454444
No 9
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.11 E-value=9e-05 Score=70.66 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=56.6
Q ss_pred CCceEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYR 431 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~ 431 (442)
...|.+..+++++|..... .....-..++|++|++++..+++.+.|++||+++++++..-.+.+ +++++.+.
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~ 236 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLL 236 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEECCEEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEE
Confidence 4578999999988765432 234556899999999999999999999999999999999876665 44554443
No 10
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.00 E-value=0.00017 Score=69.74 Aligned_cols=131 Identities=15% Similarity=0.123 Sum_probs=82.5
Q ss_pred eeECCCCCEEEecCCCceeeecCcEEEEeecCCceEE------cCCCCCCC--ChhHhhccccccCCCccccccccCC--
Q 013464 281 YVKLNPGQALYLGANEPHAYISGECIECMATSDNVVR------AGLTPKHR--DVQTLCSMLTYKQGFPEILKGFPLS-- 350 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~G~~vEim~~SDnt~R------~glt~k~~--dv~~ll~~l~~~~~~~~~~~~~~~~-- 350 (442)
...|++||++|+|||..|.+-...-..+ .++| .|..|..+ ++++ .+ +.+..
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~~Ar~-----l~V~k~y~~~~g~~p~~~v~~~~d---------v~-----~~~~~g~ 170 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVESATL-----VVFERRYEYLGSHTTELIVGSTDK---------QP-----LLETPGE 170 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESSCEEE-----EEEEEECCCCTTCCCCCEEEEGGG---------SC-----CBCCTTC
T ss_pred EEEEcCCCEEEECCCCCEEEEeCCCEEE-----EEEEeEeeeCCCCCCceeeCcHhH---------CC-----CcccCCC
Confidence 4679999999999999999864211221 2233 13222221 1111 11 11111
Q ss_pred Cc-EEEECC--CCCceEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEE--Eec
Q 013464 351 PY-ITRYLP--PFDEFEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINI--TTS 424 (442)
Q Consensus 351 ~~-~~~y~~--p~~~F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i--~~~ 424 (442)
.. .+...+ ...+|.+.++++.+|...-+ ..+..-..++|++|+|.+..+++.+.+++||.+|+++++.-.+ .+.
T Consensus 171 ~~~~r~l~p~~~~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~~~~V~~GD~i~~~~~~~h~~~n~G~ 250 (266)
T 4e2q_A 171 VFELRKLLPMSVAYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVPQWYAALGK 250 (266)
T ss_dssp CSEEEESSCCSTTCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESS
T ss_pred cEEEEEccCcccccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECCEEEEecCCCEEEECCCCcEEEEeCCC
Confidence 11 222222 14679999999988875432 2333458999999999999999999999999999999997444 445
Q ss_pred CcEEEE
Q 013464 425 SKLQLY 430 (442)
Q Consensus 425 ~~~~~~ 430 (442)
++++.+
T Consensus 251 e~~~yl 256 (266)
T 4e2q_A 251 TRSRYL 256 (266)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 566543
No 11
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.99 E-value=6.9e-05 Score=71.91 Aligned_cols=72 Identities=13% Similarity=0.055 Sum_probs=53.9
Q ss_pred CCceEEEEEEeCCCCeeeccCC-CCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--c-CcEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAV-SGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--S-SKLQLYR 431 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~-~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~-~~~~~~~ 431 (442)
...|.+.++++.++........ ....+++|++|++++..+++.+.|++||++++|++..-.+.+ + ++++++.
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~ 251 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIY 251 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSCEEEEETTCEEEECSSEEEEEEEC----CEEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEE
Confidence 3468889999987754332222 356899999999999999999999999999999998755655 3 4455544
No 12
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=97.92 E-value=0.00013 Score=61.06 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=64.9
Q ss_pred EEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEE
Q 013464 354 TRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAG 433 (442)
Q Consensus 354 ~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~ 433 (442)
.++. .+.|.+.++.+++|.....-......+++|++|++++..+++++.|++||+++||++..-.+.+.++..++..+
T Consensus 29 ~l~~--~~~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~ 106 (114)
T 3fjs_A 29 ALFK--EHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVTV 106 (114)
T ss_dssp EEEE--ETTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEESSSEEEEEEE
T ss_pred EEEe--CCCEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCcEEEEEE
Confidence 3454 46799999999888765443455679999999999999999999999999999999998777776677766666
Q ss_pred cCC
Q 013464 434 VNS 436 (442)
Q Consensus 434 ~~~ 436 (442)
+..
T Consensus 107 v~p 109 (114)
T 3fjs_A 107 VLV 109 (114)
T ss_dssp ECC
T ss_pred EeC
Confidence 543
No 13
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.88 E-value=0.00016 Score=72.72 Aligned_cols=71 Identities=18% Similarity=0.354 Sum_probs=51.5
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRA 432 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a 432 (442)
........+++|.....-......++.|++|+|+++-++++..+++||+++||++....+.+++++.++..
T Consensus 267 ti~~~~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v~~~~~~~~~GD~~~vP~~~~H~~~n~e~~~l~~~ 337 (354)
T 2d40_A 267 SMGAFLQLLPKGFASRVARTTDSTIYHVVEGSGQVIIGNETFSFSAKDIFVVPTWHGVSFQTTQDSVLFSF 337 (354)
T ss_dssp SCEEEEEEECTTCBCCCBEESSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEEEEEEEEEEEE
T ss_pred cceeEEEEECCCCCCCceecCCcEEEEEEeCeEEEEECCEEEEEcCCCEEEECCCCeEEEEeCCCEEEEEE
Confidence 34455556766653222122344899999999999999999999999999999998877766555555544
No 14
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=97.88 E-value=0.00017 Score=59.53 Aligned_cols=78 Identities=17% Similarity=0.228 Sum_probs=64.4
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcCCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVNSR 437 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~~~ 437 (442)
.+.|.+.++.+.++.....-..+...+++|++|++++..+++...+++||+++||++..-.+.+.++.+++..++..+
T Consensus 37 ~~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v~~~~~ 114 (115)
T 1yhf_A 37 RQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLVVVKPE 114 (115)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTSCEEEEESSCEEEEEEEECSC
T ss_pred CCceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCceEEEEEEccC
Confidence 466999999998776544334567899999999999999999999999999999999987777756788888777654
No 15
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=97.86 E-value=0.00058 Score=68.17 Aligned_cols=77 Identities=16% Similarity=0.118 Sum_probs=59.3
Q ss_pred CceEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEe---CCc--EEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLT---ASH--NDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~---~~~--~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
..|.+.++.+.++.......+.. ..+++|++|++++.. +++ ...|++||++++|++....+.+ +++++++..
T Consensus 232 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~ 311 (361)
T 2vqa_A 232 FNMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVV 311 (361)
T ss_dssp TTCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred ccceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEE
Confidence 36899999998876543323344 789999999999986 666 8999999999999999866665 456777777
Q ss_pred EcCCC
Q 013464 433 GVNSR 437 (442)
Q Consensus 433 ~~~~~ 437 (442)
+.+..
T Consensus 312 ~~~~~ 316 (361)
T 2vqa_A 312 FNDGD 316 (361)
T ss_dssp ESSSS
T ss_pred ECCCC
Confidence 76554
No 16
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=97.85 E-value=0.00033 Score=71.42 Aligned_cols=72 Identities=18% Similarity=0.204 Sum_probs=54.5
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEec---CcEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTS---SKLQLYRA 432 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~---~~~~~~~a 432 (442)
..+.+....+.+|.....-......+++|++|+|.+..+++++.+++||+++||++..-.+.+. +++.++.+
T Consensus 292 ~tl~~~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V~ge~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 292 LTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp SSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CeeeEEEEEECCCCcCCCcccCCcEEEEEEeCeEEEEECCEEEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 4677788888877653322234567999999999999999999999999999999998666653 34444443
No 17
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=97.82 E-value=0.00018 Score=58.57 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=61.7
Q ss_pred CCceEEEEEEeCCCCeeeccCCCC-eEE-EEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSG-PSI-FLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVNS 436 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~-~~i-l~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~~ 436 (442)
.+.|.+.++.+.++.....-.... ..+ ++|++|++++..+ ++...+++||+++||++..-.+.+.++.+++..+.|.
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~~~~p~ 109 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMKVLVTIAPP 109 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGCEEEECTTEEEEEETTSCEEEEESSSEEEEEEEESC
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcEEEEEECCC
Confidence 577999999998776544333333 677 7999999999987 6899999999999999998777665677777777765
Q ss_pred C
Q 013464 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
+
T Consensus 110 ~ 110 (110)
T 2q30_A 110 I 110 (110)
T ss_dssp C
T ss_pred C
Confidence 3
No 18
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.79 E-value=0.00014 Score=70.12 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=51.1
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe-cCcEEEEEEEcC
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT-SSKLQLYRAGVN 435 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~~~ 435 (442)
.|....+-...|.+.. .....-..+-+++|+..|+-+++++.|+.||+++|||++.+++.. .+...+.++-.|
T Consensus 206 ~~eteV~l~G~Ges~~-~~~~~d~wiWqLEGss~Vt~~~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~~~p 279 (286)
T 2qnk_A 206 TYETQVIAYGQGSSEG-LRQNVDVWLWQLEGSSVVTMGGRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQDP 279 (286)
T ss_dssp TSSEEEEEECSEEEEE-CCCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEECG
T ss_pred CCceEEEEEcCCcccc-ccCcCcEEEEEEcCceEEEECCeEEeccCCCEEEecCCCeEEEEecCCeEEEEEEECc
Confidence 3444444355554433 223345677899999999999999999999999999999999876 344444444433
No 19
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=97.79 E-value=0.00028 Score=58.34 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=63.4
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcCCC
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVNSR 437 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~~~ 437 (442)
+.|.+.++++.++.....-......+++|++|++++..+++...+++||+++||++..-.+.+.++..++..+.|.+
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~v~~p~~ 108 (116)
T 2pfw_A 32 HELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGVIKVLTAGDSFFVPPHVDHGAVCPTGGILIDTFSPAR 108 (116)
T ss_dssp TTEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEESSCEEEEEEEESCC
T ss_pred CceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEECCEEEEeCCCCEEEECcCCceeeEeCCCcEEEEEECCch
Confidence 56999999998775443334567899999999999999999999999999999999987777656788888777664
No 20
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=97.76 E-value=0.00049 Score=56.06 Aligned_cols=79 Identities=14% Similarity=0.248 Sum_probs=62.4
Q ss_pred CCceEEEEEEeCCCCeeecc--CCC-CeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEc
Q 013464 360 FDEFEVDCCILPKGTSSVFP--AVS-GPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGV 434 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~--~~~-~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~ 434 (442)
.+.|.+.++.+.++...... ... ...+++|++|++++..+++...+++||+++||++..-.+.+ +.++.++..+.
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~ 97 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYH 97 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEE
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEEC
Confidence 35689999999877654332 344 68999999999999999999999999999999999866665 44677777766
Q ss_pred CCCc
Q 013464 435 NSRF 438 (442)
Q Consensus 435 ~~~~ 438 (442)
+..+
T Consensus 98 ~~~~ 101 (113)
T 2gu9_A 98 PPAY 101 (113)
T ss_dssp SCCB
T ss_pred CCCc
Confidence 6543
No 21
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=97.73 E-value=0.00061 Score=68.74 Aligned_cols=77 Identities=10% Similarity=0.074 Sum_probs=59.5
Q ss_pred CceEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEeC-----CcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLTA-----SHNDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~~-----~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
..|.+..+++.+|.......+.. ..+++|++|++++..+ ++++.|++||++++|++....+.+ ++++.++..
T Consensus 255 ~~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v 334 (385)
T 1j58_A 255 KTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEI 334 (385)
T ss_dssp CSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEE
T ss_pred cceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEE
Confidence 36999999998876543333445 7899999999998755 568999999999999999866655 456777777
Q ss_pred EcCCC
Q 013464 433 GVNSR 437 (442)
Q Consensus 433 ~~~~~ 437 (442)
+.+..
T Consensus 335 ~~~~~ 339 (385)
T 1j58_A 335 FKDDH 339 (385)
T ss_dssp ESSSS
T ss_pred ECCCC
Confidence 66544
No 22
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=97.71 E-value=0.00057 Score=54.59 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=60.7
Q ss_pred CCceEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVNS 436 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~ 436 (442)
.+.|.+..+.+.++.....-.... ..+++|++|++++..+++...+++||++++|++..-.+.+ +.++.++..+.|.
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 466999999998776544333343 5699999999999999999999999999999999866665 3467777776664
No 23
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=97.70 E-value=0.00038 Score=58.46 Aligned_cols=78 Identities=8% Similarity=-0.004 Sum_probs=64.0
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCc-EEEEEEEcCCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSK-LQLYRAGVNSR 437 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~-~~~~~a~~~~~ 437 (442)
.+.|.+.++.+.++.....-.+....+++|++|++++..+++...+++||+++||++..-.+.+.++ ..++..+.|.+
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v~~p~~ 116 (126)
T 4e2g_A 38 GKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGEETRVLRPGMAYTIPGGVRHRARTFEDGCLVLDIFSPPR 116 (126)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETTEEEEECTTEEEEECTTCCEEEECCTTCEEEEEEEESCC
T ss_pred CCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEECCCCEEEEEEECCCC
Confidence 4679999999988865544445678999999999999999999999999999999999866766444 78887877754
No 24
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.67 E-value=0.00048 Score=69.55 Aligned_cols=73 Identities=18% Similarity=0.413 Sum_probs=57.0
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRA 432 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a 432 (442)
.+-..+....+.+|.........+-.|+.|++|+|++.-+++++.+++||+|+||+....++.+++++.+|.+
T Consensus 276 ~pti~~~~~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I~~~~~~w~~gD~fvvP~w~~h~~~n~~~a~Lf~~ 348 (368)
T 3nw4_A 276 MPTLRCEFHRLRAGTETATRNEVGSTVFQVFEGAGAVVMNGETTKLEKGDMFVVPSWVPWSLQAETQFDLFRF 348 (368)
T ss_dssp SSSCEEEEEEECTTCBCCCEEESSCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEESSSEEEEEE
T ss_pred chhHHhheEEECCCCccCCeeccccEEEEEEeCcEEEEECCEEEEecCCCEEEECCCCcEEEEeCCCEEEEEE
Confidence 3556666677777754332223456899999999999999999999999999999999988888767666654
No 25
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=97.66 E-value=0.00036 Score=59.15 Aligned_cols=77 Identities=12% Similarity=0.142 Sum_probs=60.0
Q ss_pred CCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEec-CcEEEEEEEcCC
Q 013464 359 PFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTS-SKLQLYRAGVNS 436 (442)
Q Consensus 359 p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~-~~~~~~~a~~~~ 436 (442)
+...+++..+++.+|....... ..-.+++|++|++++..+++.+.|++||+++||++...++++. ...+++.+..|.
T Consensus 36 ~~~~~~~~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~~~g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~~P~ 113 (119)
T 3lwc_A 36 HGGPITIGYGRYAPGQSLTETM-AVDDVMIVLEGRLSVSTDGETVTAGPGEIVYMPKGETVTIRSHEEGALTAYVTYPH 113 (119)
T ss_dssp --CCCEEEEEEECTTCEEEEEC-SSEEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCEEEEEEEEEEEEEEEEEECC
T ss_pred CCCCEEEEEEEECCCCCcCccC-CCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCEEEEEcCCCCeEEEEEECCC
Confidence 4567888899998886554333 6789999999999999999999999999999999998666653 456666555554
No 26
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.60 E-value=0.00089 Score=63.65 Aligned_cols=142 Identities=12% Similarity=0.120 Sum_probs=80.6
Q ss_pred eeeECCCCCEEEecCCCceeeecC-cE-EEEeecCCceEEcCCCCCCCChhHhhccccccCC-C--cc-ccccccCCCcE
Q 013464 280 NYVKLNPGQALYLGANEPHAYISG-EC-IECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQG-F--PE-ILKGFPLSPYI 353 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~G-~~-vEim~~SDnt~R~glt~k~~dv~~ll~~l~~~~~-~--~~-~~~~~~~~~~~ 353 (442)
..+.++|||.++||.|+-|..-.- .+ .=.|..-. +.-..+.. +..+..-..+++. . ++ .+...|.....
T Consensus 83 ~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~~----~~~p~~~~-~~~i~~~~~l~P~~~p~p~~~l~G~P~~~~~ 157 (238)
T 3myx_A 83 DSVTLSTGESAVIGRGTQVRIDAQPESLWAFCASTQ----ASGPDKSG-ITALDRLALLTPSSPPDPSIMISPLPQCRSN 157 (238)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECTTEEEEEEEECS----CCSCCCCS-EEEECTTCCCEEECCCCGGGBSSCCCCEEEE
T ss_pred eEEEEcCCCEEEECCCCEEEEEecCCeEEEEEeccC----CCCCCCCc-cEEecCCCCCCCCCCCChhheecCCchheee
Confidence 457799999999999999886422 22 11111110 01111111 1111111122221 1 11 11111211123
Q ss_pred EEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe-CCcEEEeCcccEEEEcCCCcEEEEecCcE
Q 013464 354 TRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT-ASHNDAVAEGDVLFAPANTEINITTSSKL 427 (442)
Q Consensus 354 ~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~-~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~ 427 (442)
..|..+...|..-.++...|..... ..+.-.++.+|+|+++|+. +|+...++.||++++|++...+.+..+.+
T Consensus 158 ~~~~~~~g~~~~GiW~~tpG~~~~~-~~~~~E~~~ILeG~v~lt~~~G~~~~~~aGD~~~~P~G~~~tWev~e~v 231 (238)
T 3myx_A 158 NLFEDTASTLRIGVWDSTPYERISR-PHKIHELMNLIEGRVVLSLENGSSLTVNTGDTVFVAQGAPCKWTSTGYV 231 (238)
T ss_dssp EEEECSSSSCEEEEEEECCEEBCCE-ECSSCEEEEEEECCEEEEETTSCEEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEECCCCCEEEeEEEeCCCEEECC-cCCCCEEEEEEEeEEEEEeCCCCEEEECCCCEEEECCCCEEEEEECccE
Confidence 4565556678888888776542221 1234578889999999987 46689999999999999998877664443
No 27
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=97.57 E-value=0.0024 Score=62.64 Aligned_cols=55 Identities=24% Similarity=0.259 Sum_probs=46.2
Q ss_pred CeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecC-cEEEEEEEcCCC
Q 013464 383 GPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSS-KLQLYRAGVNSR 437 (442)
Q Consensus 383 ~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~-~~~~~~a~~~~~ 437 (442)
+..+++|++|++++..+++.+.|++||+++||++....+.+.+ .++++..+.+..
T Consensus 239 ~~e~~~vl~G~~~~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~l~v~~~~~ 294 (337)
T 1y3t_A 239 HTETFYCLEGQMTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVLVPGL 294 (337)
T ss_dssp CEEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSEEEEEEEESST
T ss_pred CcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCeEEEEECCCCeEEEEEEcCcc
Confidence 5889999999999999999999999999999999987676632 577777765553
No 28
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=97.46 E-value=0.00093 Score=55.66 Aligned_cols=64 Identities=14% Similarity=0.191 Sum_probs=49.9
Q ss_pred CCceEEEEEEeCCCCeee--ccCCCCeEEEEEEcCcEEEEeCCcE--EEeCcccEEEEcCCCcEEEEe
Q 013464 360 FDEFEVDCCILPKGTSSV--FPAVSGPSIFLVTDGEGSMLTASHN--DAVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~--~~~~~~~~il~v~~G~~~i~~~~~~--~~l~~G~~~~Ipa~~~~~i~~ 423 (442)
.+.|.+.++..++..... ....++..+++|++|++++..+++. +.|++||+++||++..-++.+
T Consensus 28 ~~~~~i~~i~~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n 95 (112)
T 2opk_A 28 RKGLKIERIISNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAW 95 (112)
T ss_dssp ETTEEEEEEEESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEE
T ss_pred CCCEEEEEEEeCCccCCCCccccCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEe
Confidence 577999999755322111 0234678999999999999999888 999999999999999865654
No 29
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.43 E-value=0.0013 Score=55.09 Aligned_cols=78 Identities=10% Similarity=0.048 Sum_probs=60.1
Q ss_pred CCceEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEe-CCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLT-ASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVN 435 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~-~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~ 435 (442)
.+.+.+.++.+.+|.....-.+.. ..+++|++|++++.. +++...+++||++++|++..-.+.+ +.++.++..+.|
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 36 TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp CSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 456889999998876554333443 678889999999998 8899999999999999998755554 456777777766
Q ss_pred CC
Q 013464 436 SR 437 (442)
Q Consensus 436 ~~ 437 (442)
.+
T Consensus 116 ~~ 117 (125)
T 3h8u_A 116 GN 117 (125)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 30
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=97.42 E-value=0.001 Score=54.85 Aligned_cols=74 Identities=18% Similarity=0.323 Sum_probs=54.6
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEc
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGV 434 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~ 434 (442)
+.+.+..+.++++.....-......+++|++|++++..+++.+.|++||+++||++..-.+.+.++..++...+
T Consensus 36 ~~~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~i~~ 109 (114)
T 2ozj_A 36 DRVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQITL 109 (114)
T ss_dssp SSEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCCBEEEEEEEEEEEEEEE
T ss_pred CCceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEECCEEEEecCCCEEEECCCCcEEEEeCCCcEEEEEEE
Confidence 45666666666654332223456889999999999999999999999999999999986565544555555444
No 31
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=97.39 E-value=0.00076 Score=55.95 Aligned_cols=78 Identities=15% Similarity=0.324 Sum_probs=59.3
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEE-EeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHND-AVAEGDVLFAPANTEINITT--SSKLQLYRAGVNS 436 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~-~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~ 436 (442)
.+.|.+..+.+.++.....-..+...+++|++|++++..+++.. .+++||+++||++..-.+.+ +.++.++....+.
T Consensus 24 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~ 103 (117)
T 2b8m_A 24 TEHVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPH 103 (117)
T ss_dssp CSSCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEETTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSC
T ss_pred CCceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEECCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 46788988888776543222345788999999999999988888 99999999999999866665 3345666665554
Q ss_pred C
Q 013464 437 R 437 (442)
Q Consensus 437 ~ 437 (442)
+
T Consensus 104 ~ 104 (117)
T 2b8m_A 104 P 104 (117)
T ss_dssp G
T ss_pred C
Confidence 4
No 32
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=97.36 E-value=0.0028 Score=56.70 Aligned_cols=76 Identities=11% Similarity=0.162 Sum_probs=60.1
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe---cCcEEEEEEEcCC
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT---SSKLQLYRAGVNS 436 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~---~~~~~~~~a~~~~ 436 (442)
..|.+..+++.++.....-......+++|++|++++..+++.+.+++||+++||++..-.+.+ +.++.++....+.
T Consensus 54 ~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 54 PAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp SSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CcEEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 589999999987754433335678999999999999999999999999999999999855544 3466666665544
No 33
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=97.35 E-value=0.00091 Score=56.22 Aligned_cols=78 Identities=18% Similarity=0.330 Sum_probs=61.0
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCCCc
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVNSRF 438 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~~~ 438 (442)
..|.+...++.++.....-..+...+++|++|++++..+++.+.+++||+++||++..-.+.+ +.+++++..+.+.++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f~~~~ 111 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWWDKES 111 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEEECHHH
T ss_pred CCcEEEEEEECCCCccCCEecCCeEEEEEEeCEEEEEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEECHHH
Confidence 458888888877654333335679999999999999999999999999999999998755554 456777777766554
No 34
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=97.34 E-value=0.00082 Score=58.08 Aligned_cols=81 Identities=14% Similarity=0.166 Sum_probs=61.7
Q ss_pred ECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcC
Q 013464 356 YLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVN 435 (442)
Q Consensus 356 y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~ 435 (442)
+.++...|.+..+++.++ .... ....-.+++|++|++++..+++.+.|++||++++|++...++++.+.++++.+..|
T Consensus 50 ~~~~~~~~~~~~~~~~pG-~~~~-h~~~~E~~~VLeG~~~l~~~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v~~p 127 (133)
T 2pyt_A 50 TEQDGSSMAAGFMQWDNA-FFPW-TLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYVAWP 127 (133)
T ss_dssp CGGGTCSSEEEEEEEEEE-EEEE-ECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEES
T ss_pred ecCCCCcEEEEEEEECCC-Cccc-cCCCCEEEEEEECEEEEEECCEEEEECCCcEEEECCCCEEEEEeCCCEEEEEEEcC
Confidence 444444677777777766 3332 23567899999999999999999999999999999999866766566777766666
Q ss_pred CCc
Q 013464 436 SRF 438 (442)
Q Consensus 436 ~~~ 438 (442)
..|
T Consensus 128 ~~~ 130 (133)
T 2pyt_A 128 ANW 130 (133)
T ss_dssp TTC
T ss_pred Ccc
Confidence 654
No 35
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=97.32 E-value=0.0017 Score=57.63 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=61.5
Q ss_pred EECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 355 RYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 355 ~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
++..+...|.+..+++.++.....-......+++|++|++++..+++.+.+++||+++||++..-.+.+ +.++.++..
T Consensus 36 L~~~~~~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 36 LFADPNLACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp EECCTTCSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred EEcCCCCcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 444445779999988876644333334567899999999999999999999999999999999866665 455666655
Q ss_pred EcCC
Q 013464 433 GVNS 436 (442)
Q Consensus 433 ~~~~ 436 (442)
..+.
T Consensus 116 ~~~~ 119 (156)
T 3kgz_A 116 VNAA 119 (156)
T ss_dssp EESS
T ss_pred EeCC
Confidence 5433
No 36
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=97.30 E-value=0.0011 Score=56.08 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=60.5
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVNS 436 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~ 436 (442)
...|.+..+++.++.....-..+...+++|++|++++..+++.+.+++||++++|++..-.+.+ ++++.++..+.+.
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQGEETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKE 123 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGG
T ss_pred CCCEEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 4578999998876654433345678999999999999999999999999999999999866665 3467777666654
No 37
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=97.28 E-value=0.0022 Score=57.43 Aligned_cols=81 Identities=14% Similarity=0.048 Sum_probs=61.1
Q ss_pred EECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 355 RYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 355 ~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
++..+...|.+..+++.+|.....-......+++|++|++++..+++.+.+++||+++||++..-.+.+ +.++.++..
T Consensus 45 L~~~~~~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 45 LFSGNGLTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRAVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp EECCTTCSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred EECCCCCeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 344445779999988876654333334567899999999999999999999999999999999866665 445666655
Q ss_pred EcC
Q 013464 433 GVN 435 (442)
Q Consensus 433 ~~~ 435 (442)
..+
T Consensus 125 ~~~ 127 (166)
T 3jzv_A 125 VNA 127 (166)
T ss_dssp EES
T ss_pred Ecc
Confidence 544
No 38
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=97.27 E-value=0.002 Score=56.80 Aligned_cols=78 Identities=14% Similarity=0.234 Sum_probs=61.3
Q ss_pred CCceEEEEEEeCCCCe-eeccCC-CCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCC-CcEEEEe--cCcEEEEEEEc
Q 013464 360 FDEFEVDCCILPKGTS-SVFPAV-SGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPAN-TEINITT--SSKLQLYRAGV 434 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~-~~~~~~-~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~-~~~~i~~--~~~~~~~~a~~ 434 (442)
...|.+..+++.++.. ...-.+ ....+++|++|++++..+++.+.+++||+++||++ ..-.+.+ +.++.++....
T Consensus 43 ~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~ 122 (162)
T 3l2h_A 43 LRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQ 122 (162)
T ss_dssp CCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEE
T ss_pred CCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEEC
Confidence 5679999999987753 222222 46899999999999999999999999999999998 7766665 45677777766
Q ss_pred CCC
Q 013464 435 NSR 437 (442)
Q Consensus 435 ~~~ 437 (442)
+.+
T Consensus 123 p~~ 125 (162)
T 3l2h_A 123 RLD 125 (162)
T ss_dssp CCS
T ss_pred CCC
Confidence 655
No 39
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=97.22 E-value=0.0023 Score=55.61 Aligned_cols=79 Identities=18% Similarity=0.242 Sum_probs=60.2
Q ss_pred CCceEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEeCCcE------EEeCcccEEEEcCCCcEEEEe--cCcEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLTASHN------DAVAEGDVLFAPANTEINITT--SSKLQLY 430 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~~~~~------~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~ 430 (442)
...|.+..+.+.++.....-.... -.+++|++|++++..+++. ..|++||+++||++..-.+.+ +..+.++
T Consensus 40 ~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l 119 (148)
T 2oa2_A 40 GDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLY 119 (148)
T ss_dssp CSSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred CCceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 466899999998775433222333 4899999999999887777 999999999999999855654 4567777
Q ss_pred EEEcCCCc
Q 013464 431 RAGVNSRF 438 (442)
Q Consensus 431 ~a~~~~~~ 438 (442)
..+.+..+
T Consensus 120 ~i~~~~~~ 127 (148)
T 2oa2_A 120 SIYAPPQH 127 (148)
T ss_dssp EEEESCCS
T ss_pred EEECCCCC
Confidence 77776653
No 40
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=97.20 E-value=0.0036 Score=64.25 Aligned_cols=74 Identities=16% Similarity=0.284 Sum_probs=52.1
Q ss_pred eEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEe---CC--------------cEE--EeCcccEEEEcCCCcEEEE
Q 013464 363 FEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLT---AS--------------HND--AVAEGDVLFAPANTEINIT 422 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~---~~--------------~~~--~l~~G~~~~Ipa~~~~~i~ 422 (442)
.++.++.+.++..... .......|++|++|++.+.. ++ ..+ .|++||+++||++....+.
T Consensus 249 is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~ 328 (416)
T 1uij_A 249 IFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVN 328 (416)
T ss_dssp EEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEE
T ss_pred cceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEE
Confidence 6788888887743211 11346899999999998852 22 245 8999999999999985555
Q ss_pred ecCcEEEEEEEcCC
Q 013464 423 TSSKLQLYRAGVNS 436 (442)
Q Consensus 423 ~~~~~~~~~a~~~~ 436 (442)
+.+++.++..+..+
T Consensus 329 n~~~~~~l~f~~~~ 342 (416)
T 1uij_A 329 ATSNLNFLAFGINA 342 (416)
T ss_dssp ESSSEEEEEEEETC
T ss_pred cCCCeEEEEEEcCC
Confidence 65677776655443
No 41
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.003 Score=56.79 Aligned_cols=81 Identities=15% Similarity=0.157 Sum_probs=61.8
Q ss_pred EECCCCCceEEEEEEeCC-CCe-eeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEE
Q 013464 355 RYLPPFDEFEVDCCILPK-GTS-SVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLY 430 (442)
Q Consensus 355 ~y~~p~~~F~l~~i~~~~-~~~-~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~ 430 (442)
.+......|....+++++ +.. -......+-.+++|++|+++++.+++.+.|++||++++|++...++++ +..++++
T Consensus 80 ~fs~~~~~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll 159 (166)
T 2vpv_A 80 MFDKHKEYFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMF 159 (166)
T ss_dssp ECCTTTCSCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred eecCCcccceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEE
Confidence 454434578888888877 532 111345678899999999999999999999999999999999988887 4456777
Q ss_pred EEEcC
Q 013464 431 RAGVN 435 (442)
Q Consensus 431 ~a~~~ 435 (442)
.+.+.
T Consensus 160 ~Vq~~ 164 (166)
T 2vpv_A 160 FVQVT 164 (166)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66543
No 42
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=97.17 E-value=0.002 Score=51.82 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=55.6
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCe-EEEEEEcCcEEEEeCC--cEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGP-SIFLVTDGEGSMLTAS--HNDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~-~il~v~~G~~~i~~~~--~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
...|.+.++++.++.....-..... .+++|++|++++..++ +...+++||++++|++..-.+.+ +.++.++..
T Consensus 15 ~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 15 NERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 4679999999987754332234454 4999999999999877 78999999999999999866665 335555543
No 43
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=97.16 E-value=0.0032 Score=58.92 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=63.8
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVNS 436 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~~ 436 (442)
.+...+..+.+++|.........+-.+++|++|++++..++++..+++||++++|++..-.+.+.+++.++....+.
T Consensus 34 ~~~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~~~~ 110 (227)
T 3rns_A 34 QPNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENNKKTISNGDFLEITANHNYSIEARDNLKLIEIGEKI 110 (227)
T ss_dssp CSSEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESSCEEEEETTEEEEECSSCCEEEEESSSEEEEEEEECC
T ss_pred CCCcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECCCcEEEEEEeec
Confidence 35789999999988766544556789999999999999999999999999999999998777776677777665543
No 44
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=97.16 E-value=0.0026 Score=53.37 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=58.6
Q ss_pred CCceEEEEEEeCCCCeee-ccCCCCeEEEE-EEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcC
Q 013464 360 FDEFEVDCCILPKGTSSV-FPAVSGPSIFL-VTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVN 435 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~-~~~~~~~~il~-v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~ 435 (442)
.+.+.+..+.+.++.... .-..+...+++ |++|++++..+++.+.+++||+++||++..-.+.+ +.++.++..+.+
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGEKIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcC
Confidence 456777778887665332 11234565555 99999999999999999999999999999755554 345777777776
Q ss_pred CCcc
Q 013464 436 SRFL 439 (442)
Q Consensus 436 ~~~~ 439 (442)
..++
T Consensus 103 ~~~~ 106 (125)
T 3cew_A 103 AGSL 106 (125)
T ss_dssp TTCC
T ss_pred Cccc
Confidence 6654
No 45
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=97.11 E-value=0.0037 Score=55.09 Aligned_cols=78 Identities=21% Similarity=0.235 Sum_probs=59.6
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCC---------cEEEeCcccEEEEcCCCcEEEEec---CcE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTAS---------HNDAVAEGDVLFAPANTEINITTS---SKL 427 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~---------~~~~l~~G~~~~Ipa~~~~~i~~~---~~~ 427 (442)
...|.+.++.+..+.....-.+....+++|++|++++..++ +.+.+++||+++||++..-.+.+. .++
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~ 117 (163)
T 1lr5_A 38 MKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDL 117 (163)
T ss_dssp CSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCE
T ss_pred CCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCE
Confidence 45799999999876543222345678999999999999887 899999999999999998666653 367
Q ss_pred EEEEEEcCCC
Q 013464 428 QLYRAGVNSR 437 (442)
Q Consensus 428 ~~~~a~~~~~ 437 (442)
.++....+.+
T Consensus 118 ~~l~i~~~~~ 127 (163)
T 1lr5_A 118 QVLVIISRPP 127 (163)
T ss_dssp EEEEEEESSS
T ss_pred EEEEEECCCC
Confidence 7776665543
No 46
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=97.09 E-value=0.0027 Score=56.16 Aligned_cols=73 Identities=12% Similarity=0.223 Sum_probs=54.5
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcCC
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVNS 436 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~~ 436 (442)
.+++-.+++. +...... .+.-.+.+|++|++++..+++.+.+++||+++||++...++.+.+.++++.+..|.
T Consensus 65 ~~s~g~~~~e-~~~~~~~-~~~eE~~yVLeG~~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V~~P~ 137 (151)
T 4axo_A 65 RLGCGMMEMK-ETTFDWT-LNYDEIDYVIDGTLDIIIDGRKVSASSGELIFIPKGSKIQFSVPDYARFIYVTYPA 137 (151)
T ss_dssp SCEEEEEEEE-EEEEEEE-CSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECS
T ss_pred cEEEEEEEEc-CccccEe-CCCcEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCEEEEEeCCCEEEEEEECCC
Confidence 5666666665 3333332 35568899999999999999999999999999999998777764456666555554
No 47
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=97.05 E-value=0.0039 Score=55.41 Aligned_cols=79 Identities=16% Similarity=0.227 Sum_probs=61.1
Q ss_pred CCCceEEEEEEeCCCCeee-ccCCCC-eEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCC--CcEEEEe--cCcEEEEEE
Q 013464 359 PFDEFEVDCCILPKGTSSV-FPAVSG-PSIFLVTDGEGSMLTASHNDAVAEGDVLFAPAN--TEINITT--SSKLQLYRA 432 (442)
Q Consensus 359 p~~~F~l~~i~~~~~~~~~-~~~~~~-~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~--~~~~i~~--~~~~~~~~a 432 (442)
....|.+..+++..+.... .-.+.. -.+++|++|++++..+++++.|++||+++||++ ..-.+.+ +..++++..
T Consensus 39 ~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v 118 (163)
T 3i7d_A 39 GLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVV 118 (163)
T ss_dssp TCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEE
T ss_pred CCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEE
Confidence 3567999999998775321 111234 489999999999999999999999999999999 7766665 456777777
Q ss_pred EcCCC
Q 013464 433 GVNSR 437 (442)
Q Consensus 433 ~~~~~ 437 (442)
+.+.+
T Consensus 119 ~~p~~ 123 (163)
T 3i7d_A 119 GTRTP 123 (163)
T ss_dssp EECCS
T ss_pred ECCCC
Confidence 76655
No 48
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=96.98 E-value=0.0062 Score=62.08 Aligned_cols=76 Identities=18% Similarity=0.254 Sum_probs=54.1
Q ss_pred CceEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEeC---------Cc---EEEeCcccEEEEcCCCcEEEEecCcE
Q 013464 361 DEFEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLTA---------SH---NDAVAEGDVLFAPANTEINITTSSKL 427 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~~---------~~---~~~l~~G~~~~Ipa~~~~~i~~~~~~ 427 (442)
-..++.++.+.+|..... .......|++|++|++.+..- +. +..|++||+++||++....+.+.+++
T Consensus 237 l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~~l 316 (397)
T 2phl_A 237 LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATSNV 316 (397)
T ss_dssp TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESSSE
T ss_pred CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCCCe
Confidence 568888889887743221 113468999999999988532 21 57799999999999998666665677
Q ss_pred EEEEEEcCC
Q 013464 428 QLYRAGVNS 436 (442)
Q Consensus 428 ~~~~a~~~~ 436 (442)
.++..+..+
T Consensus 317 ~~l~f~~~s 325 (397)
T 2phl_A 317 NFTGFGINA 325 (397)
T ss_dssp EEEEEEESC
T ss_pred EEEEEECCC
Confidence 776544443
No 49
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=96.93 E-value=0.0072 Score=51.51 Aligned_cols=72 Identities=19% Similarity=0.283 Sum_probs=55.0
Q ss_pred CceEEEEEEeCCCCeeeccCCC-CeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVS-GPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~-~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
..+.+.++++.++.....-... ...+++|++|++++..+++.+.|++||++++|++..-.+.+ +.++.++..
T Consensus 55 ~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 55 KARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp SEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred ceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEECCEEEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 3467778888877654332344 47899999999999999999999999999999998866665 345555544
No 50
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=96.93 E-value=0.0084 Score=61.84 Aligned_cols=74 Identities=19% Similarity=0.329 Sum_probs=51.7
Q ss_pred eEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEeC---C----------c---EE--EeCcccEEEEcCCCcEEEEe
Q 013464 363 FEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLTA---S----------H---ND--AVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~~---~----------~---~~--~l~~G~~~~Ipa~~~~~i~~ 423 (442)
.++.++.+.+|..... .......|++|++|++.+..- + . .+ .|++||+++||++....+.+
T Consensus 266 is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n 345 (434)
T 2ea7_A 266 VFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINA 345 (434)
T ss_dssp EEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred cceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEc
Confidence 6788899887743221 112468999999999988521 1 1 44 79999999999999855556
Q ss_pred cCcEEEEEEEcCC
Q 013464 424 SSKLQLYRAGVNS 436 (442)
Q Consensus 424 ~~~~~~~~a~~~~ 436 (442)
.+++.++..+.++
T Consensus 346 ~~~~~~v~f~~~~ 358 (434)
T 2ea7_A 346 TSNLNFFAFGINA 358 (434)
T ss_dssp SSSEEEEEEEETC
T ss_pred CCCeEEEEEECCC
Confidence 5677766555444
No 51
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=96.91 E-value=0.01 Score=53.54 Aligned_cols=75 Identities=8% Similarity=-0.014 Sum_probs=56.7
Q ss_pred CCceEEEEEEeCCCCeee--ccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcC
Q 013464 360 FDEFEVDCCILPKGTSSV--FPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVN 435 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~--~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~ 435 (442)
...|.+..+.+.++.... .-......+++|++|++++..+++.+.|++||++++|++..-.+.+ ++.+ ++....+
T Consensus 101 ~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~ 179 (192)
T 1y9q_A 101 DTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAY 179 (192)
T ss_dssp TTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEEC
T ss_pred CCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEec
Confidence 466888888888775433 1123457999999999999999999999999999999999866665 3445 4444444
No 52
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=96.91 E-value=0.0031 Score=53.85 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=57.3
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEE--eCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEc
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSML--TASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGV 434 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~--~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~ 434 (442)
...|.+..+++.++.....-.+....+++|++|++++. .+++...+++||+++||++..-.+.+ +..+.++....
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~ 114 (145)
T 3ht1_A 36 ADRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAP 114 (145)
T ss_dssp CCSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGGGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEE
T ss_pred CCcEEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEEC
Confidence 45899999988766433222345678889999999999 88999999999999999999866655 44566655543
No 53
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=96.86 E-value=0.0059 Score=53.16 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=58.7
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcE-EEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcC
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHN-DAVAEGDVLFAPANTEINITT--SSKLQLYRAGVN 435 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~-~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~ 435 (442)
..|.+.++.+.++.....-......+++|++|++++..+++. ..+++||+++||++..-.+.+ +..+.++....+
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGKPARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTSCCEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred CcEEEEEEEECCCCccCceECCCceEEEEEeCEEEEEECCEEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 579999999987765433334568999999999999998887 999999999999999855554 445666665554
No 54
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=96.74 E-value=0.0024 Score=51.96 Aligned_cols=77 Identities=14% Similarity=0.184 Sum_probs=55.8
Q ss_pred EEECCCCCceEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEeCCc---EEEeCcccEEEEcCCCcEEEEe--cCcE
Q 013464 354 TRYLPPFDEFEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLTASH---NDAVAEGDVLFAPANTEINITT--SSKL 427 (442)
Q Consensus 354 ~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~~~~---~~~l~~G~~~~Ipa~~~~~i~~--~~~~ 427 (442)
.+.. .+.|.+.|+.+++|....+-.+.. ..++++++|.+++..++. ...++.|++++||++..-++.+ +.++
T Consensus 10 V~ie--n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl 87 (98)
T 3lag_A 10 IQID--NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEI 87 (98)
T ss_dssp EEEE--SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCE
T ss_pred EEEc--CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCCCeE
Confidence 3454 578999999999987654433333 457778899999987653 4568999999999999877776 4556
Q ss_pred EEEEE
Q 013464 428 QLYRA 432 (442)
Q Consensus 428 ~~~~a 432 (442)
.++..
T Consensus 88 ~~IeV 92 (98)
T 3lag_A 88 VFLEI 92 (98)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65554
No 55
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=96.73 E-value=0.0073 Score=60.40 Aligned_cols=71 Identities=14% Similarity=0.246 Sum_probs=53.8
Q ss_pred ceEEEEEEeCCC---CeeeccCCCCeEEEEEEcCcEEEEeCC-cEEEeCcccEEEEcCCCcEEEEecCc-EEEEEE
Q 013464 362 EFEVDCCILPKG---TSSVFPAVSGPSIFLVTDGEGSMLTAS-HNDAVAEGDVLFAPANTEINITTSSK-LQLYRA 432 (442)
Q Consensus 362 ~F~l~~i~~~~~---~~~~~~~~~~~~il~v~~G~~~i~~~~-~~~~l~~G~~~~Ipa~~~~~i~~~~~-~~~~~a 432 (442)
.|.+.++++..+ .....-..+.-.+++|++|+++|+.++ +.+.|+.||+++|||+....+.+.++ ..++..
T Consensus 248 ~f~~~~i~~~~~~~g~~~~~h~~~~~~~~~vleG~~~i~i~g~~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~ 323 (350)
T 1juh_A 248 NYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFV 323 (350)
T ss_dssp CEEEEEEEECCCCTTSCCCCBCCSSCEEEEEEESCEEEEETTSCCEEECTTCEEEECTTCCEEEEESSSSEEEEEE
T ss_pred EEEEEEEeeccccCCCCCCcccCCCcEEEEEEeeEEEEEECCeEEEEeCCCCEEEECCCCCEEEEecCCeEEEEEE
Confidence 689988888653 222212245678999999999999988 89999999999999999988876434 344433
No 56
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=96.71 E-value=0.013 Score=53.03 Aligned_cols=73 Identities=12% Similarity=0.127 Sum_probs=55.9
Q ss_pred CCceEEEEEEeCCCCeee---ccCCCCeEEEEEEcCcEEEEeCC----cEEEeCcccEEEEcCCCcEEEEec---CcEEE
Q 013464 360 FDEFEVDCCILPKGTSSV---FPAVSGPSIFLVTDGEGSMLTAS----HNDAVAEGDVLFAPANTEINITTS---SKLQL 429 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~---~~~~~~~~il~v~~G~~~i~~~~----~~~~l~~G~~~~Ipa~~~~~i~~~---~~~~~ 429 (442)
...|.+.++++.++.... ...+.+..+++|++|++++..++ +.+.|++||++++|++..-.+.+. .++++
T Consensus 114 ~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~ 193 (198)
T 2bnm_A 114 APSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKL 193 (198)
T ss_dssp STTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEE
T ss_pred CCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEE
Confidence 466888888887765332 22345679999999999999888 899999999999999998666553 44555
Q ss_pred EEE
Q 013464 430 YRA 432 (442)
Q Consensus 430 ~~a 432 (442)
+..
T Consensus 194 l~v 196 (198)
T 2bnm_A 194 IAV 196 (198)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 57
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=96.69 E-value=0.0055 Score=59.16 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=58.2
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCcEEEEecCcEEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTEINITTSSKLQLYRA 432 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a 432 (442)
-..|.+..+++.+|.........+-.+++|++|++++..+ +++..|++||++++|++..-++++.+.++++..
T Consensus 67 G~~f~~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~g~~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~V 140 (266)
T 4e2q_A 67 GSHFVMYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTSSSSKKLTVDSYAYLPPNFHHSLDCVESATLVVF 140 (266)
T ss_dssp TCSSEEEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--CCCEEECTTEEEEECTTCCCEEEESSCEEEEEE
T ss_pred CCcEEEEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECCCcEEEEcCCCEEEECCCCCEEEEeCCCEEEEEE
Confidence 3579999999987643222234567899999999999998 899999999999999999988888777776664
No 58
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=96.65 E-value=0.011 Score=53.38 Aligned_cols=76 Identities=11% Similarity=0.075 Sum_probs=58.1
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCCC
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVNSR 437 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~~ 437 (442)
.-+.+.++++.+|.....-...+...++|++|++++..+ ++++.|++||++ +|++..-.+++ +..++++....+..
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~~ 155 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEAP 155 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEECC
T ss_pred CCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCCC
Confidence 457777888877654332233456788999999999987 788999999999 99999866765 45688888777655
No 59
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=96.59 E-value=0.017 Score=56.56 Aligned_cols=78 Identities=21% Similarity=0.136 Sum_probs=60.7
Q ss_pred CCceEEEEEEeCCCCeeeccCCC-CeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe-cCcEEEEEEEcCCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVS-GPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT-SSKLQLYRAGVNSR 437 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~-~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~~~~~ 437 (442)
...|.+..+.+..+.......+. ...+++|++|++++..+++...+++||++++|++..-.+.+ +..++++..+.+..
T Consensus 43 ~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~~~~~~~p~~ 122 (337)
T 1y3t_A 43 GDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGERYLLISGDYANIPAGTPHSYRMQSHRTRLVSYTMKGN 122 (337)
T ss_dssp TSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCEEEEECSTTEEEEEEEETTS
T ss_pred CCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEECCCCeEEEEEECCCC
Confidence 35789999888877544333344 67899999999999999999999999999999999866665 33567776665554
No 60
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=96.58 E-value=0.014 Score=51.85 Aligned_cols=71 Identities=10% Similarity=0.120 Sum_probs=54.3
Q ss_pred eEEEEEEeCCCCeeeccCCCCeEEEEEEc--CcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcCC
Q 013464 363 FEVDCCILPKGTSSVFPAVSGPSIFLVTD--GEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVNS 436 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~~~~~il~v~~--G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~~ 436 (442)
|++..+++..+..... -.....+++|++ |++++..+++.+.+++||+++||++..-++.+ +++++....|.
T Consensus 47 ~sv~~v~~g~~~~~H~-H~~~~E~~yVLe~~G~g~v~idge~~~l~~GD~v~IPpg~~H~i~g--~l~~L~I~~Pp 119 (157)
T 4h7l_A 47 VSVHYTQITKAARTHY-HREHQEIYVVLDHAAHATIELNGQSYPLTKLLAISIPPLVRHRIVG--EATIINIVSPP 119 (157)
T ss_dssp CEEEEEEECSCCCCBB-CSSCEEEEEEEEECTTCEEEETTEEEECCTTEEEEECTTCCEEEES--CEEEEEEEESS
T ss_pred EEEEEEeCCCCccceE-CCCCcEEEEEEecCcEEEEEECCEEEEeCCCCEEEECCCCeEeeEC--CEEEEEEECCC
Confidence 5666667654433321 123468999999 99999999999999999999999999866654 78888877664
No 61
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=96.50 E-value=0.0083 Score=50.74 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=45.9
Q ss_pred CC-eEEEEEEcCcEEEEeCC-cEEEeCcccEEEEcCCCcEEEEe-cCcEEEEEEEcCCCc
Q 013464 382 SG-PSIFLVTDGEGSMLTAS-HNDAVAEGDVLFAPANTEINITT-SSKLQLYRAGVNSRF 438 (442)
Q Consensus 382 ~~-~~il~v~~G~~~i~~~~-~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~~~~~~ 438 (442)
.. ..+++|++|++++..++ +.+.+++||+++||++..-.+.+ +...+++..+.+..+
T Consensus 62 ~~~~E~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~~~l~~~~p~~~ 121 (134)
T 2o8q_A 62 TVGFQLFYVLRGWVEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDLEVLEIVSPAGF 121 (134)
T ss_dssp CCSCEEEEEEESEEEEEETTTEEEEEETTCEEECCTTCCEEEEEECTTCEEEEEESSTTC
T ss_pred CCCcEEEEEEeCEEEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCCeEEEEEECCCch
Confidence 44 89999999999999988 99999999999999999855654 345666666666553
No 62
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=96.46 E-value=0.0082 Score=49.20 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=40.4
Q ss_pred CCCeEEEEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCcEEEEecCcEEE
Q 013464 381 VSGPSIFLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTEINITTSSKLQL 429 (442)
Q Consensus 381 ~~~~~il~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~ 429 (442)
.+...+++|++|++++..+ ++.+.|++||++++|++..-++++.++.+.
T Consensus 47 H~~~E~~~Vl~G~~~~~i~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 47 YDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp CSSCEEEEEEEEEEEEEETTCCEEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred CCceEEEEEEeCEEEEEECCCCEEEECCCCEEEECCCCcEEEEeCCCeeE
Confidence 3467899999999999988 889999999999999999866665444433
No 63
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=96.44 E-value=0.017 Score=45.95 Aligned_cols=50 Identities=14% Similarity=0.290 Sum_probs=40.8
Q ss_pred CCC-eEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEE
Q 013464 381 VSG-PSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLY 430 (442)
Q Consensus 381 ~~~-~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~ 430 (442)
... ..+++|++|++++..+++...+++||+++||++..-.+.+.++..++
T Consensus 47 H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l 97 (102)
T 3d82_A 47 HADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAKEECKIM 97 (102)
T ss_dssp CTTCCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCBEEEEEEEEEEE
T ss_pred CCCCcEEEEEEeCEEEEEECCEEEEEcCCCEEEECCCCeEeeEcCCCCEEE
Confidence 445 89999999999999999999999999999999997555543344443
No 64
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=96.43 E-value=0.013 Score=52.81 Aligned_cols=73 Identities=14% Similarity=0.198 Sum_probs=54.0
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC----CcEEEeCcccEEEEcCCCcEEEEe--cC-cEEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA----SHNDAVAEGDVLFAPANTEINITT--SS-KLQLYRAG 433 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~----~~~~~l~~G~~~~Ipa~~~~~i~~--~~-~~~~~~a~ 433 (442)
..+++.++++.++.....-..+...+++|++|++++... +....|++||++++|++....+.+ ++ .+.++...
T Consensus 39 ~~~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~ 118 (178)
T 1dgw_A 39 RDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFA 118 (178)
T ss_dssp TTEEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEE
T ss_pred CcEEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEE
Confidence 569999999987754322122468999999999999753 568899999999999999866655 33 45555543
No 65
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=96.33 E-value=0.015 Score=56.30 Aligned_cols=74 Identities=15% Similarity=0.210 Sum_probs=57.3
Q ss_pred CCceEEEEEEeCCCCeeec--cCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVF--PAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAG 433 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~--~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~ 433 (442)
...|.+.++++.++..... .......+++|++|++++..++++..|++||++++|++..-.+++ +..++++...
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~ 142 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIR 142 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 4679999999977654311 123467899999999999999999999999999999999877765 3456655443
No 66
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=96.30 E-value=0.021 Score=54.06 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=55.7
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRA 432 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a 432 (442)
...|.+..+++.++...... . +-.+++|++|++++..++++..|++||++++|++..-.+++.+.++++..
T Consensus 47 ~~~~~~~~~~l~Pg~~~~~~-~-~ee~~~Vl~G~~~~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~l~v 117 (246)
T 1sfn_A 47 GARFVQFTAEMPAGAQATES-V-YQRFAFVLSGEVDVAVGGETRTLREYDYVYLPAGEKHMLTAKTDARVSVF 117 (246)
T ss_dssp CCSSEEEEEEECTTCEEECC-S-SEEEEEEEEEEEEEECSSCEEEECTTEEEEECTTCCCEEEEEEEEEEEEE
T ss_pred CCcEEEEEEEECCCCcCCCC-c-eeEEEEEEECEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCEEEEEE
Confidence 46799999999877554322 2 56788999999999999999999999999999999866655445555544
No 67
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=96.18 E-value=0.017 Score=49.02 Aligned_cols=77 Identities=13% Similarity=0.152 Sum_probs=53.6
Q ss_pred EECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe-CCcEEEeCcccEEEEcCCCcEEEEecCcE-EEEEE
Q 013464 355 RYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT-ASHNDAVAEGDVLFAPANTEINITTSSKL-QLYRA 432 (442)
Q Consensus 355 ~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~-~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~-~~~~a 432 (442)
.|..+...+.+-.+++..+. ........-.++.|++|+++|.. +++.+.|+.||++++|++...++++.+.. ++|..
T Consensus 41 ~~~~~~g~~~~g~w~~~pG~-~~~~~~~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~ 119 (123)
T 3bcw_A 41 AFEGGQGKVESGVWESTSGS-FQSNTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFV 119 (123)
T ss_dssp EEEETTTTEEEEEEEEEEEE-EECCCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEEEEEE
T ss_pred EEeCCCCCEEEEEEEECCCc-eeeEcCCCcEEEEEEEEEEEEEECCCeEEEECCCCEEEECCCCeEEEEECCceeEEEEE
Confidence 34445566777777776553 22222222689999999999998 78889999999999999998666553333 44544
No 68
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=96.15 E-value=0.04 Score=53.11 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=59.4
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEe--Cc--------ccEEEEcCCCcEEEEecCcEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAV--AE--------GDVLFAPANTEINITTSSKLQL 429 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l--~~--------G~~~~Ipa~~~~~i~~~~~~~~ 429 (442)
..+-.+..+++.+|+++.+...+.=.+++.+.|.++|+.++++..+ .+ .++++||.+..++|++..++++
T Consensus 26 ~~y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~~~~ 105 (270)
T 2qjv_A 26 WEYVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETDLEL 105 (270)
T ss_dssp SSSCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSSEEE
T ss_pred cEEeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEECCCCEEEEEecCCceE
Confidence 4453444555567887776554455678888999999999988766 44 5899999999999998778999
Q ss_pred EEEEcCCC
Q 013464 430 YRAGVNSR 437 (442)
Q Consensus 430 ~~a~~~~~ 437 (442)
+++..+..
T Consensus 106 ~v~sAp~~ 113 (270)
T 2qjv_A 106 AVCSAPGF 113 (270)
T ss_dssp EEEEEECC
T ss_pred EEEeeecC
Confidence 99886643
No 69
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=96.13 E-value=0.018 Score=46.66 Aligned_cols=51 Identities=12% Similarity=0.175 Sum_probs=40.6
Q ss_pred CCC-eEEEEEEcCcEEEEeCC-cEEEeCcccEEEEcCCCcEEEEecCcEEEEE
Q 013464 381 VSG-PSIFLVTDGEGSMLTAS-HNDAVAEGDVLFAPANTEINITTSSKLQLYR 431 (442)
Q Consensus 381 ~~~-~~il~v~~G~~~i~~~~-~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~ 431 (442)
... ..+++|++|++++..++ +.+.+++||+++||++..-.+.+.++..++.
T Consensus 45 H~~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~ 97 (107)
T 2i45_A 45 HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVL 97 (107)
T ss_dssp C--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECTTCCEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEeCEEEEEECCCcEEEECCCCEEEECCCCcEeeEeCCCeEEEE
Confidence 344 89999999999999988 9999999999999999986565544455443
No 70
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.07 E-value=0.071 Score=50.47 Aligned_cols=73 Identities=8% Similarity=0.125 Sum_probs=55.4
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEE-EEEEEc
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQ-LYRAGV 434 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~-~~~a~~ 434 (442)
.+-.++-.+.+ .+.. .......-.+++|++|+.+|+.+++.+.+++||+++||++..+++...+.++ +|.++-
T Consensus 44 ~~~~~~G~~~~-~g~~-~v~~~p~dE~~~VleG~~~lt~~g~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~ 117 (238)
T 3myx_A 44 EQGIAAGIVEF-GTAL-SVEAYPYTEMLVMHRGSVTLTSGTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCAST 117 (238)
T ss_dssp TTSEEEEEEEE-CSEE-EESSCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCCEEEEECTTEEEEEEEEC
T ss_pred CCCeEEEEEEe-cccc-ccccCCCcEEEEEEEeEEEEECCCeEEEEcCCCEEEECCCCEEEEEecCCeEEEEEecc
Confidence 46677777777 3432 2233455789999999999988889999999999999999999998755554 444443
No 71
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=95.95 E-value=0.024 Score=53.99 Aligned_cols=74 Identities=14% Similarity=0.130 Sum_probs=54.4
Q ss_pred CCceEEEEEEeCCCCeeeccCC-C-CeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAV-S-GPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRAG 433 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~-~-~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~ 433 (442)
...|.+..+++.++........ . .-.+++|++|++++..++++..|++||++++|++..-.+++ +..++++...
T Consensus 56 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 56 GASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp TCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CCcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 3567888888866543221112 2 34689999999999999999999999999999999866765 3456665544
No 72
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=95.88 E-value=0.061 Score=50.13 Aligned_cols=78 Identities=14% Similarity=0.134 Sum_probs=63.3
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCcEEEEe-cCcEEEEEEEcCCC
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTEINITT-SSKLQLYRAGVNSR 437 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~~~~~ 437 (442)
.+.+++-.+.+.++..+..-....-.+++|++|.+++..+ ++...++.||++++|++..-.++. +.++.++.++...+
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~dePllalwvW~G~~ 208 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLTDPILTLVLWRGAG 208 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEETTSCCEEECTTCEEEECTTCCEEEECCSSCEEEEEEEESTT
T ss_pred CCeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEECCCCEEecCCCCEEEcCCCCceeEEECCccEEEEEEEeCCC
Confidence 5778888888888866544345568999999999999776 788999999999999999855544 67888888887766
No 73
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=95.82 E-value=0.2 Score=51.73 Aligned_cols=71 Identities=15% Similarity=0.349 Sum_probs=48.2
Q ss_pred ceEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEe--CC----------c----EEEeCcccEEEEcCCCcEEEEec
Q 013464 362 EFEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLT--AS----------H----NDAVAEGDVLFAPANTEINITTS 424 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~--~~----------~----~~~l~~G~~~~Ipa~~~~~i~~~ 424 (442)
..++.++.+.++.-... .......|++|++|++.+.. .. . +..|++||+++||++......+.
T Consensus 280 ~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~ 359 (445)
T 2cav_A 280 DILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA 359 (445)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEES
T ss_pred CCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC
Confidence 46888888877643211 11356899999999998852 21 2 45599999999999998445554
Q ss_pred CcEEEEEE
Q 013464 425 SKLQLYRA 432 (442)
Q Consensus 425 ~~~~~~~a 432 (442)
+++.++..
T Consensus 360 ~~~~~v~f 367 (445)
T 2cav_A 360 SDLNMVGI 367 (445)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEE
Confidence 56555443
No 74
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=95.80 E-value=0.13 Score=43.35 Aligned_cols=77 Identities=12% Similarity=0.118 Sum_probs=52.4
Q ss_pred CCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcC
Q 013464 358 PPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVN 435 (442)
Q Consensus 358 ~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~ 435 (442)
.+...|.+-..+...|. ...........+.+|+|+++|+.+ |+...++.||++++|++...+.+-.+.++=+..++|
T Consensus 37 ~~~g~~~~GvWe~tPG~-~~~~~~~~~E~~~iLeG~~~lt~ddG~~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~~~ 114 (116)
T 3es4_A 37 DVENGTIVAVWMAEPGI-YNYAGRDLEETFVVVEGEALYSQADADPVKIGPGSIVSIAKGVPSRLEILSSFRKLATVIP 114 (116)
T ss_dssp SSSSCCEEEEEEECSEE-EEECCCSEEEEEEEEECCEEEEETTCCCEEECTTEEEEECTTCCEEEEECSCEEEEEEEEE
T ss_pred CCCCCEEEEEEecCCce-eECeeCCCcEEEEEEEeEEEEEeCCCeEEEECCCCEEEECCCCeEEEEEeEEEeEEEEEec
Confidence 34455666555665552 222222233889999999999874 667999999999999999877766555644444444
No 75
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=95.74 E-value=0.031 Score=45.39 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=54.3
Q ss_pred EEEECCCCCceEEEEEEeCCCCeeeccCC-CCeEEEEEEcCcEEEEe-CCc--EEEeCcccEEEEcCCCcEEEEe--cCc
Q 013464 353 ITRYLPPFDEFEVDCCILPKGTSSVFPAV-SGPSIFLVTDGEGSMLT-ASH--NDAVAEGDVLFAPANTEINITT--SSK 426 (442)
Q Consensus 353 ~~~y~~p~~~F~l~~i~~~~~~~~~~~~~-~~~~il~v~~G~~~i~~-~~~--~~~l~~G~~~~Ipa~~~~~i~~--~~~ 426 (442)
+.++. .+.+.++++++.+|.....-.. ..+.++++++|++++.. +++ ...++.||++++|++..-.+.+ +.+
T Consensus 9 tv~~~--~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~ 86 (98)
T 2ozi_A 9 EIQID--NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAE 86 (98)
T ss_dssp EEEEE--SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSC
T ss_pred EEEEe--CCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCC
Confidence 45566 4679999999988864322222 23556667899999987 443 4689999999999999866666 445
Q ss_pred EEEEEEE
Q 013464 427 LQLYRAG 433 (442)
Q Consensus 427 ~~~~~a~ 433 (442)
+.++..-
T Consensus 87 l~fi~vE 93 (98)
T 2ozi_A 87 IVFLEIE 93 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 6665543
No 76
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=95.72 E-value=0.12 Score=53.02 Aligned_cols=68 Identities=25% Similarity=0.411 Sum_probs=47.4
Q ss_pred eEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEe---CC-------------------------c--EEEeCcccEE
Q 013464 363 FEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLT---AS-------------------------H--NDAVAEGDVL 411 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~---~~-------------------------~--~~~l~~G~~~ 411 (442)
.++.++.+.++.-... .......+++|++|++.+.. ++ . ...|++||++
T Consensus 263 is~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~ 342 (418)
T 3s7i_A 263 MMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVF 342 (418)
T ss_dssp CEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEE
T ss_pred eeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEE
Confidence 4889999987643221 11246899999999998741 11 1 4668999999
Q ss_pred EEcCCCcEEEEecCcEEEE
Q 013464 412 FAPANTEINITTSSKLQLY 430 (442)
Q Consensus 412 ~Ipa~~~~~i~~~~~~~~~ 430 (442)
+||++......+++++.++
T Consensus 343 vvP~G~~~~~~~~~~l~~v 361 (418)
T 3s7i_A 343 IMPAAHPVAINASSELHLL 361 (418)
T ss_dssp EECTTCCEEEEESSCEEEE
T ss_pred EECCCCEEEEECCCCEEEE
Confidence 9999998555566665543
No 77
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=95.71 E-value=0.069 Score=48.82 Aligned_cols=75 Identities=11% Similarity=0.012 Sum_probs=55.0
Q ss_pred CceEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEeC------Cc--EEEeCcccEEEEcCCCcEEEEe--cCcEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLTA------SH--NDAVAEGDVLFAPANTEINITT--SSKLQL 429 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~~------~~--~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~ 429 (442)
..+.+.++++..+.....-.+.. ..+++|++|++++... ++ +..+++||+++||++..-.+.+ ++++.+
T Consensus 70 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~ 149 (201)
T 1fi2_A 70 LGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYM 149 (201)
T ss_dssp SSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred CceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEE
Confidence 35889999998775433222343 5999999999998652 44 7899999999999999855554 456777
Q ss_pred EEEEcC
Q 013464 430 YRAGVN 435 (442)
Q Consensus 430 ~~a~~~ 435 (442)
+..+..
T Consensus 150 l~v~~~ 155 (201)
T 1fi2_A 150 VVSFNS 155 (201)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 666543
No 78
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=95.62 E-value=0.079 Score=48.07 Aligned_cols=75 Identities=12% Similarity=0.209 Sum_probs=52.6
Q ss_pred ceEEEEEEeCCCCe------eeccCC---CCeEEEEEEcCcEEEEeCCcE-----EEeCcccEEEEcCCCcEEEEe--cC
Q 013464 362 EFEVDCCILPKGTS------SVFPAV---SGPSIFLVTDGEGSMLTASHN-----DAVAEGDVLFAPANTEINITT--SS 425 (442)
Q Consensus 362 ~F~l~~i~~~~~~~------~~~~~~---~~~~il~v~~G~~~i~~~~~~-----~~l~~G~~~~Ipa~~~~~i~~--~~ 425 (442)
.+.+....+.+|.. ...-.+ +...+++|++|++++..+++. +.+++||+++||++..-.+.+ +.
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~ 145 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDE 145 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcc
Confidence 56666667776643 111112 236999999999999876655 999999999999999855554 45
Q ss_pred cEEEEEEEcCC
Q 013464 426 KLQLYRAGVNS 436 (442)
Q Consensus 426 ~~~~~~a~~~~ 436 (442)
++.++..+.+.
T Consensus 146 ~~~~l~v~~~~ 156 (190)
T 1x82_A 146 PFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEEEETT
T ss_pred cEEEEEEECCC
Confidence 67666655543
No 79
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=95.48 E-value=0.035 Score=53.31 Aligned_cols=73 Identities=8% Similarity=0.089 Sum_probs=53.8
Q ss_pred CCceEEEEEEeCCCCeeeccCC--CCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAV--SGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~--~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
...|.+..+++.++........ .+-.+++|++|++++..++++..|++||++++|++..-.+++ +..++++.+
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v 135 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQETHELEAGGYAYFTPEMKMYLANAQEADTEVFLY 135 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSCEEEEETTEEEEECTTSCCEEEESSSSCEEEEEE
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 3568888888876543221111 234689999999999999999999999999999999866766 345555544
No 80
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=95.31 E-value=0.013 Score=53.06 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=31.6
Q ss_pred hcceeeECCCCCEEEecCCCceee---ecCcE-EEEeecCC
Q 013464 277 FFFNYVKLNPGQALYLGANEPHAY---ISGEC-IECMATSD 313 (442)
Q Consensus 277 ~~Ln~v~l~pGd~i~ipaGt~HAy---~~G~~-vEim~~SD 313 (442)
...+.+.|+|||.+.||+|+.|+. ..|.+ .|++..+|
T Consensus 116 ~a~~~i~L~pGesvtIppg~~H~f~ageegvli~EvSt~~d 156 (175)
T 2y0o_A 116 TVWHEIELEPGGQYTIPPNTKHWFQAGEEGAVVTEMSSTST 156 (175)
T ss_dssp CCCEEEEECTTCEEEECTTCCEEEEEEEEEEEEEEEEECCC
T ss_pred cCCcEEEECCCCEEEECCCCcEEEEeCCCCEEEEEEeCCCC
Confidence 467899999999999999999999 45555 49999876
No 81
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=95.25 E-value=0.13 Score=50.92 Aligned_cols=76 Identities=11% Similarity=0.062 Sum_probs=55.8
Q ss_pred CceEEEEEEeCCCCeeeccCCC-CeEEEEEEcCcEEEEe---CC--cEEEeCcccEEEEcCCCcEEEEec--CcEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVS-GPSIFLVTDGEGSMLT---AS--HNDAVAEGDVLFAPANTEINITTS--SKLQLYRA 432 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~-~~~il~v~~G~~~i~~---~~--~~~~l~~G~~~~Ipa~~~~~i~~~--~~~~~~~a 432 (442)
..+.+.++.+.++.....-.+. ...+++|++|++++.. ++ ....|++||+++||++..-.+.+. .++.++..
T Consensus 50 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v 129 (361)
T 2vqa_A 50 KGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLV 129 (361)
T ss_dssp CSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Confidence 4678888888776543322234 7899999999999986 44 468999999999999998666653 46777655
Q ss_pred EcCC
Q 013464 433 GVNS 436 (442)
Q Consensus 433 ~~~~ 436 (442)
+-+.
T Consensus 130 ~~~~ 133 (361)
T 2vqa_A 130 FNDG 133 (361)
T ss_dssp ESST
T ss_pred ECCC
Confidence 5443
No 82
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=95.12 E-value=0.093 Score=45.06 Aligned_cols=57 Identities=16% Similarity=0.187 Sum_probs=44.3
Q ss_pred CCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEec---CcEEEEEEEcCCC
Q 013464 381 VSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTS---SKLQLYRAGVNSR 437 (442)
Q Consensus 381 ~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~---~~~~~~~a~~~~~ 437 (442)
.+.+.+++|++|++++..+++.+.+++||.++||++..-.+... ++.+.+......+
T Consensus 36 h~~~~i~~v~~G~~~~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~~~ 95 (164)
T 2arc_A 36 MKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPR 95 (164)
T ss_dssp CSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEECCC
T ss_pred CCceEEEEEEEeEEEEEECCEEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEECCh
Confidence 46788999999999999999999999999999999987545442 3355555444433
No 83
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=95.04 E-value=0.072 Score=50.45 Aligned_cols=74 Identities=9% Similarity=0.118 Sum_probs=54.3
Q ss_pred CCceEEEEEEeCCCCeeeccCCC-CeEEEEEEcCcEEEEe--------CCc------------EEEeCcccEEEEcCCCc
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVS-GPSIFLVTDGEGSMLT--------ASH------------NDAVAEGDVLFAPANTE 418 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~-~~~il~v~~G~~~i~~--------~~~------------~~~l~~G~~~~Ipa~~~ 418 (442)
...|++.++.++++.....-.+. .-.+++|++|++++.. +++ ...+++||++++|++..
T Consensus 40 ~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~ 119 (239)
T 2xlg_A 40 DIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYM 119 (239)
T ss_dssp TEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEE
T ss_pred CCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCC
Confidence 45689999888776432211123 4679999999999987 777 89999999999999988
Q ss_pred EEEEe--cCcEEE-EEEE
Q 013464 419 INITT--SSKLQL-YRAG 433 (442)
Q Consensus 419 ~~i~~--~~~~~~-~~a~ 433 (442)
-.+.+ +.++++ +..+
T Consensus 120 H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 120 HGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCCEEEEEEEE
Confidence 66665 445676 4443
No 84
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=94.91 E-value=0.079 Score=52.96 Aligned_cols=70 Identities=10% Similarity=0.190 Sum_probs=53.1
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEE-EeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSM-LTASHNDAVAEGDVLFAPANTEINITT--SSKLQLY 430 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i-~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~ 430 (442)
..|.+....+.+|.....-......+.+|++|++++ ..+++.+.+++||+++||++..-.+.+ ++++.++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l 170 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWL 170 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 457788888877764432234567999999999988 778899999999999999999866665 3445444
No 85
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=94.89 E-value=0.09 Score=49.73 Aligned_cols=77 Identities=10% Similarity=0.270 Sum_probs=58.0
Q ss_pred CceEEEEEEeCCCCeeecc--CCCCeEEEEEEcCcEEEEeCCc---EEEeCcccEEEEcCCCcEEEEec----CcEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFP--AVSGPSIFLVTDGEGSMLTASH---NDAVAEGDVLFAPANTEINITTS----SKLQLYR 431 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~--~~~~~~il~v~~G~~~i~~~~~---~~~l~~G~~~~Ipa~~~~~i~~~----~~~~~~~ 431 (442)
..|.+..+.+.......+. -.+.+.|++|++|+++ ..+++ .+.+.+|+.++||++....+... ++.+.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~~ 83 (276)
T 3gbg_A 5 KSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSV 83 (276)
T ss_dssp TTEEEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEEEE
T ss_pred hhhhhhhhhhhcccchhccHhhhcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEEEE
Confidence 5688999988766544332 2467999999999999 88888 99999999999999987555433 5666666
Q ss_pred EEcCCCc
Q 013464 432 AGVNSRF 438 (442)
Q Consensus 432 a~~~~~~ 438 (442)
.....++
T Consensus 84 i~f~~~~ 90 (276)
T 3gbg_A 84 ITISDSF 90 (276)
T ss_dssp EEECHHH
T ss_pred EEEcHHH
Confidence 6555443
No 86
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=94.76 E-value=0.16 Score=47.62 Aligned_cols=68 Identities=16% Similarity=0.108 Sum_probs=51.2
Q ss_pred eEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEE-EcCCCcEEEEe--cCcEEEE
Q 013464 363 FEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLF-APANTEINITT--SSKLQLY 430 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~-Ipa~~~~~i~~--~~~~~~~ 430 (442)
..+..+.+.+|.....-......+++|++|++++..+++...+.+||+++ ||++..-.+.+ +..+.++
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l 104 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARNDTDQEVIAI 104 (243)
T ss_dssp EEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEETTEEEEEETTTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEECCEEEEECCCCEEEEcCCCCcEeeEeCCCCcEEEE
Confidence 45556667777544333456788999999999999999999999999996 99999866655 3344444
No 87
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=94.61 E-value=0.12 Score=52.97 Aligned_cols=73 Identities=12% Similarity=0.163 Sum_probs=54.4
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe----CCcEEEeCcccEEEEcCCCcEEEEe---cCcEEEEEEEc
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT----ASHNDAVAEGDVLFAPANTEINITT---SSKLQLYRAGV 434 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~----~~~~~~l~~G~~~~Ipa~~~~~i~~---~~~~~~~~a~~ 434 (442)
.+++.++++.++.....-..+...+++|++|++++.. .+.+..+++||+++||++..-.+.+ ++++.++..+.
T Consensus 48 ~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~ 127 (416)
T 1uij_A 48 DYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAI 127 (416)
T ss_dssp TCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEE
T ss_pred cEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEec
Confidence 4999999998875332222346789999999999874 3568999999999999999855554 34666665543
No 88
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=94.58 E-value=0.16 Score=50.81 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=53.0
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe---CCc--EEEeCcccEEEEcCCCcEEEEe-cCcEEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT---ASH--NDAVAEGDVLFAPANTEINITT-SSKLQLYRAG 433 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~---~~~--~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~ 433 (442)
..|.+.++.+.++.....-.+....+++|++|++++.. +++ ...+++||+++||++..-.+.+ +..+.++..+
T Consensus 77 ~~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~~v~ 155 (385)
T 1j58_A 77 ENLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVF 155 (385)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEE
T ss_pred CceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCCCEEEEEEE
Confidence 46888889888775433222346899999999999987 566 5699999999999999855554 2234544444
No 89
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=94.57 E-value=0.093 Score=52.82 Aligned_cols=63 Identities=16% Similarity=0.136 Sum_probs=50.1
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEE-EEeCCcEEEeCcccEEEEcCCCcEEEEe
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGS-MLTASHNDAVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~-i~~~~~~~~l~~G~~~~Ipa~~~~~i~~ 423 (442)
+.+.+....+.+|.....-.+....+.+|++|+|+ +..+++++.+++||++++|++..-.+.+
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG~~~~~~~GD~v~iP~g~~H~~~N 164 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNGDPVRMSRGDLLLTPGWCFHGHMN 164 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETTEEEEEETTCEEEECTTCCEEEEE
T ss_pred CceEEEEEEECCCCccCceecccceEEEEEecceEEEEECCEEEEEeCCCEEEECCCCcEEeEe
Confidence 45777777787776543323445789999999996 7778999999999999999999866666
No 90
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=94.50 E-value=0.075 Score=48.67 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=44.1
Q ss_pred CCeEEEEEEcCcEEEEeCCc-----EEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCCCc
Q 013464 382 SGPSIFLVTDGEGSMLTASH-----NDAVAEGDVLFAPANTEINITT--SSKLQLYRAGVNSRF 438 (442)
Q Consensus 382 ~~~~il~v~~G~~~i~~~~~-----~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~~~ 438 (442)
+...|.+|++|+|.+..+++ .+.+++||.++||+++.-.+.. +..+..++.|.+.+.
T Consensus 103 ~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~ 166 (191)
T 1vr3_A 103 LDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPV 166 (191)
T ss_dssp SSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCC
T ss_pred CcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCC
Confidence 45789999999999976543 4689999999999999844443 345788888877663
No 91
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=94.29 E-value=0.11 Score=52.87 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=50.3
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEE-EeCCcEEEeCcccEEEEcCCCcEEEEe
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSM-LTASHNDAVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i-~~~~~~~~l~~G~~~~Ipa~~~~~i~~ 423 (442)
.+.+.+....+.+|+....-.+....+.+|++|+|.. ..+++++.+++||++++|++..-.+.+
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~G~~~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEECCEEEEEcCCCEEEECcCCCEEEEc
Confidence 3558788888888865433233456899999999976 678899999999999999999866655
No 92
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=94.00 E-value=0.16 Score=52.43 Aligned_cols=76 Identities=13% Similarity=0.189 Sum_probs=55.5
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe--C--CcEEEeCcccEEEEcCCCcEEEEec---CcEEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT--A--SHNDAVAEGDVLFAPANTEINITTS---SKLQLYRAG 433 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~--~--~~~~~l~~G~~~~Ipa~~~~~i~~~---~~~~~~~a~ 433 (442)
..+++.++++.++........+...+++|++|++++.. . ..+..+++||++++|++..-.+.+. .++.++..+
T Consensus 84 g~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~ 163 (445)
T 2cav_A 84 RDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFA 163 (445)
T ss_dssp TTEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEE
T ss_pred CcEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEe
Confidence 34888999998774332222357899999999999863 2 3688999999999999998666552 467777665
Q ss_pred cCC
Q 013464 434 VNS 436 (442)
Q Consensus 434 ~~~ 436 (442)
.++
T Consensus 164 ~~~ 166 (445)
T 2cav_A 164 ITF 166 (445)
T ss_dssp ECC
T ss_pred ccC
Confidence 543
No 93
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=93.87 E-value=0.15 Score=52.43 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=53.4
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe--C--CcEEEeCcccEEEEcCCCcEEEEec---CcEEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT--A--SHNDAVAEGDVLFAPANTEINITTS---SKLQLYRAG 433 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~--~--~~~~~l~~G~~~~Ipa~~~~~i~~~---~~~~~~~a~ 433 (442)
.+++.++++.++.....-..+...+++|++|++++.. . ..+..|++||++++|++....+.+. .++.++..+
T Consensus 60 ~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~ 138 (434)
T 2ea7_A 60 NYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLA 138 (434)
T ss_dssp TCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEe
Confidence 4899999998875433222346789999999999864 2 4588999999999999998556553 356666554
No 94
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=93.86 E-value=0.28 Score=51.19 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=53.1
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC------------------------------CcEEEeCcccE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA------------------------------SHNDAVAEGDV 410 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~------------------------------~~~~~l~~G~~ 410 (442)
-.+++.++++.++.-......+.+.+++|++|++.+... .+...|++||+
T Consensus 43 ~gv~~~r~~i~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDv 122 (493)
T 2d5f_A 43 AGVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDV 122 (493)
T ss_dssp HTCEEEEEEECTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEEEETTEE
T ss_pred CCEEEEEEEeCCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccceEEEecCCCE
Confidence 458999999987753322224568999999999998632 13678999999
Q ss_pred EEEcCCCcEEEEec--CcEEEEEEE
Q 013464 411 LFAPANTEINITTS--SKLQLYRAG 433 (442)
Q Consensus 411 ~~Ipa~~~~~i~~~--~~~~~~~a~ 433 (442)
++|||+....+.+. .++.++..+
T Consensus 123 i~iPaG~~h~~~N~g~~~l~~v~~~ 147 (493)
T 2d5f_A 123 LVIPPGVPYWTYNTGDEPVVAISLL 147 (493)
T ss_dssp EEECTTCCEEEEECSSSCEEEEEEE
T ss_pred EEECCCCcEEEEeCCCCCEEEEEEe
Confidence 99999998666663 346665544
No 95
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=93.02 E-value=0.36 Score=47.99 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=52.2
Q ss_pred CceEEEEEEeCCCCeee--ccCCC-CeEEEEEEcCcEEEEeCC-----cEEEeCcccEEEEcCCCcEEEEe-cCcEEEEE
Q 013464 361 DEFEVDCCILPKGTSSV--FPAVS-GPSIFLVTDGEGSMLTAS-----HNDAVAEGDVLFAPANTEINITT-SSKLQLYR 431 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~--~~~~~-~~~il~v~~G~~~i~~~~-----~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~ 431 (442)
..|.+.....+++.... .-.+. ...+++|++|++++..++ +.+.|++||++++|++..-.+.+ +...+++.
T Consensus 46 ~~~~~~~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~~~l~ 125 (350)
T 1juh_A 46 YAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTG 125 (350)
T ss_dssp TSCEEEEEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTEEEEE
T ss_pred CcEEEEEEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 45666644444443211 11233 678999999999998777 89999999999999998866655 22346666
Q ss_pred EEcCCC
Q 013464 432 AGVNSR 437 (442)
Q Consensus 432 a~~~~~ 437 (442)
.+.|..
T Consensus 126 v~~p~~ 131 (350)
T 1juh_A 126 VIVPGG 131 (350)
T ss_dssp EEESSC
T ss_pred EEcCcc
Confidence 655544
No 96
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=92.79 E-value=0.47 Score=49.12 Aligned_cols=73 Identities=19% Similarity=0.145 Sum_probs=52.6
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC--C------------------------cEEEeCcccEEEEcC
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA--S------------------------HNDAVAEGDVLFAPA 415 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~--~------------------------~~~~l~~G~~~~Ipa 415 (442)
...+.|+++.++.-......+.+.+++|++|++.+..- + +...|++||+++||+
T Consensus 62 gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPa 141 (459)
T 2e9q_A 62 GVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPA 141 (459)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEECT
T ss_pred ceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEECC
Confidence 57888999987643222223578999999999998642 1 246899999999999
Q ss_pred CCcEEEEe--cCcEEEEEEEc
Q 013464 416 NTEINITT--SSKLQLYRAGV 434 (442)
Q Consensus 416 ~~~~~i~~--~~~~~~~~a~~ 434 (442)
+....+.+ +.++.++..+-
T Consensus 142 G~~H~~~N~g~~~l~~l~~~d 162 (459)
T 2e9q_A 142 GVSHWMYNRGQSDLVLIVFAD 162 (459)
T ss_dssp TCCEEEEECSSSCEEEEEEEE
T ss_pred CCCEEEEeCCCCCEEEEEEec
Confidence 99866665 34566665553
No 97
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=92.55 E-value=0.47 Score=49.34 Aligned_cols=73 Identities=14% Similarity=0.186 Sum_probs=52.1
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC--C-------------------------cEEEeCcccEEEEc
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA--S-------------------------HNDAVAEGDVLFAP 414 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~--~-------------------------~~~~l~~G~~~~Ip 414 (442)
.+++.++++.++.-......+.+.+++|++|++.+... + +...|++||+++||
T Consensus 47 gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iP 126 (476)
T 1fxz_A 47 GVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVP 126 (476)
T ss_dssp TCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTTEEEEEC
T ss_pred ceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCCCEEEEC
Confidence 57889999987643222223578999999999888532 1 26789999999999
Q ss_pred CCCcEEEEe--cCcEEEEEEEc
Q 013464 415 ANTEINITT--SSKLQLYRAGV 434 (442)
Q Consensus 415 a~~~~~i~~--~~~~~~~~a~~ 434 (442)
++....+.+ +.++.++..+-
T Consensus 127 aG~~h~~~N~G~~~l~~i~~~d 148 (476)
T 1fxz_A 127 TGVAWWMYNNEDTPVVAVSIID 148 (476)
T ss_dssp TTCEEEEEECSSSCEEEEEEEC
T ss_pred CCCcEEEEeCCCCCEEEEEEec
Confidence 999865655 34566665543
No 98
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=92.36 E-value=0.37 Score=48.91 Aligned_cols=73 Identities=11% Similarity=0.126 Sum_probs=53.4
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe----CCcEEEeCcccE------EEEcCCCcEEEEe---cCcE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT----ASHNDAVAEGDV------LFAPANTEINITT---SSKL 427 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~----~~~~~~l~~G~~------~~Ipa~~~~~i~~---~~~~ 427 (442)
..+++.++++.++........+...+++|++|++.+.. +..+..|++||. ++||++....+.+ +.++
T Consensus 50 ~~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l 129 (397)
T 2phl_A 50 EDYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDL 129 (397)
T ss_dssp TTCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCE
T ss_pred ccEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCe
Confidence 45999999998765322222356789999999999864 235788999999 9999999855654 2456
Q ss_pred EEEEEE
Q 013464 428 QLYRAG 433 (442)
Q Consensus 428 ~~~~a~ 433 (442)
.++..+
T Consensus 130 ~~i~~~ 135 (397)
T 2phl_A 130 RIIQLA 135 (397)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 666554
No 99
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=92.12 E-value=0.16 Score=43.96 Aligned_cols=72 Identities=15% Similarity=0.187 Sum_probs=48.7
Q ss_pred EEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcE--EEeCcccEEEEcCCCcEE-EEecCcEEEEEEEcCC
Q 013464 365 VDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHN--DAVAEGDVLFAPANTEIN-ITTSSKLQLYRAGVNS 436 (442)
Q Consensus 365 l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~--~~l~~G~~~~Ipa~~~~~-i~~~~~~~~~~a~~~~ 436 (442)
+..+++++|..+..-.+.+...++|++|+.+...++.. ..+++|+.+++|++..-. ....++..++.++.+.
T Consensus 46 ~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~~e~~~~l~~~~gp 120 (145)
T 2o1q_A 46 TAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRGGKAAGGDTAIAPGYGYESANARHDKTEFPVASEFYMSFLGP 120 (145)
T ss_dssp EEEEEECTTEEECCEEESSCEEEEEEEEEEEETTCGGGTSEEEESSEEEEECTTCEESCCEEEEEEEEEEEEESC
T ss_pred EEEEEECCCCCCCccCCCCCEEEEEEEeEEEEcCCCEecceEeCCCEEEEECcCCccCCeECCCCeEEEEEECCc
Confidence 55677777765432234467789999999997655455 899999999999998633 3322345666655443
No 100
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=92.09 E-value=0.42 Score=46.30 Aligned_cols=54 Identities=11% Similarity=0.214 Sum_probs=45.0
Q ss_pred eEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCc-EEEEe---cCcEEEEEEEcCCC
Q 013464 384 PSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTE-INITT---SSKLQLYRAGVNSR 437 (442)
Q Consensus 384 ~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~-~~i~~---~~~~~~~~a~~~~~ 437 (442)
=.+++.+.|.++|+.+++++.|..-++++||.+.. +++.+ ..+++++++..|..
T Consensus 80 E~~iV~lgG~~~V~vdg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~sAPa~ 137 (289)
T 1ywk_A 80 ELGVINIGGPGFIEIDGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISCVPAH 137 (289)
T ss_dssp EEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEECS
T ss_pred EEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccccC
Confidence 45777889999999999999999999999999987 77775 34588888877654
No 101
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=91.81 E-value=0.16 Score=44.95 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=24.7
Q ss_pred eeECCCCCEEEecCCCceeeecCcE--EEEeecC
Q 013464 281 YVKLNPGQALYLGANEPHAYISGEC--IECMATS 312 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~G~~--vEim~~S 312 (442)
.++|+|||+++||+|+.|.+. |.+ +.|+.+.
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~-g~l~~L~I~~Pp 119 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIV-GEATIINIVSPP 119 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEE-SCEEEEEEEESS
T ss_pred EEEeCCCCEEEECCCCeEeeE-CCEEEEEEECCC
Confidence 578999999999999999986 554 4655543
No 102
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=91.79 E-value=0.74 Score=48.19 Aligned_cols=74 Identities=11% Similarity=0.151 Sum_probs=52.8
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC--C-------------------------------------
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA--S------------------------------------- 400 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~--~------------------------------------- 400 (442)
|..+++.++++.++.-......+.+.+++|++|++.+... +
T Consensus 45 ~~gvs~~r~~i~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 124 (510)
T 3c3v_A 45 CAGVALSRLVLRRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSH 124 (510)
T ss_dssp HHTCEEEEEEECTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEE
T ss_pred cCcEEEEEEEECCCCCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccccccccccccc
Confidence 4557899999987743222224578999999999988531 1
Q ss_pred -cEEEeCcccEEEEcCCCcEEEEec--CcEEEEEEE
Q 013464 401 -HNDAVAEGDVLFAPANTEINITTS--SKLQLYRAG 433 (442)
Q Consensus 401 -~~~~l~~G~~~~Ipa~~~~~i~~~--~~~~~~~a~ 433 (442)
+...|++||+++|||+....+.+. .++.++..+
T Consensus 125 qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~ 160 (510)
T 3c3v_A 125 QKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLT 160 (510)
T ss_dssp SCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred ceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEe
Confidence 136899999999999998666653 456665554
No 103
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=91.47 E-value=0.48 Score=49.50 Aligned_cols=71 Identities=15% Similarity=0.185 Sum_probs=48.4
Q ss_pred eEEEEEEeCCCCeeeccCC-CCeEEEEEEcCcEEEEeCC---c-E--EEeCcccEEEEcCCCcEEEEe-cCcEEEEEEE
Q 013464 363 FEVDCCILPKGTSSVFPAV-SGPSIFLVTDGEGSMLTAS---H-N--DAVAEGDVLFAPANTEINITT-SSKLQLYRAG 433 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~-~~~~il~v~~G~~~i~~~~---~-~--~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~ 433 (442)
+.+.++.+.++.....-.+ ....+++|++|++++...+ . . ..|++||+++||++....+.+ +.++.++..+
T Consensus 367 ls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~e~~~~l~~~ 445 (493)
T 2d5f_A 367 LSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFK 445 (493)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCCCCEEEEEEE
Confidence 8899999987764322112 3468999999999996432 2 2 459999999999999733333 3345554444
No 104
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=91.27 E-value=0.11 Score=42.31 Aligned_cols=22 Identities=27% Similarity=0.374 Sum_probs=19.6
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
.+.|++||++++|+|++|++-.
T Consensus 77 ~~~l~~Gd~i~i~~~~~H~~~~ 98 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAHKIHAIAG 98 (114)
T ss_dssp EEEECTTCEEEECTTCCBEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEe
Confidence 4679999999999999999864
No 105
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=91.21 E-value=0.61 Score=48.44 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=49.1
Q ss_pred ceEEEEEEeCCCCeeeccCC-CCeEEEEEEcCcEEEEeCC----cEE--EeCcccEEEEcCCCcEEEEe-cCcEEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVFPAV-SGPSIFLVTDGEGSMLTAS----HND--AVAEGDVLFAPANTEINITT-SSKLQLYRAG 433 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~-~~~~il~v~~G~~~i~~~~----~~~--~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~ 433 (442)
.+++.++.+.+|.....-.+ ....+++|++|++++...+ ..+ .|++||+++||++....+.+ +.++.++..+
T Consensus 337 ~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~ 416 (476)
T 1fxz_A 337 RLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFK 416 (476)
T ss_dssp TCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEE
T ss_pred cceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEE
Confidence 68888888887754322112 3578999999999996532 233 49999999999999844444 3445544444
No 106
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=91.14 E-value=0.83 Score=47.84 Aligned_cols=72 Identities=17% Similarity=0.155 Sum_probs=48.5
Q ss_pred ceEEEEEEeCCCCeeeccCC-CCeEEEEEEcCcEEEEeCC----cEE--EeCcccEEEEcCCCcEEEEe-cCcEEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVFPAV-SGPSIFLVTDGEGSMLTAS----HND--AVAEGDVLFAPANTEINITT-SSKLQLYRAG 433 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~-~~~~il~v~~G~~~i~~~~----~~~--~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~ 433 (442)
.+++.++.+.+|.....-.+ ....+++|++|++++...+ ..+ .|++||+++||++....+.+ +.++.++..+
T Consensus 371 ~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng~e~l~~l~f~ 450 (510)
T 3c3v_A 371 GLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQSDNFEYVAFK 450 (510)
T ss_dssp TCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE
T ss_pred eEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeCCCCEEEEEEE
Confidence 57888898887754322112 3578999999999996422 233 49999999999999844444 3344444443
No 107
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=90.82 E-value=0.48 Score=48.44 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=47.4
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe----CCcEEEeCcccEEEEcCCCcEEEEe
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT----ASHNDAVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~----~~~~~~l~~G~~~~Ipa~~~~~i~~ 423 (442)
..+.+.++++.++.-....-.+...|++|++|++.+.. +..+..|++||++.||++.-..+.+
T Consensus 42 ~~~~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 42 QNHRIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp TTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEE
T ss_pred cceEEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEe
Confidence 57999999998764322111356889999999998864 2347899999999999999855555
No 108
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=90.80 E-value=0.65 Score=48.46 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=50.7
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe--CC--c----------------------EEEeCcccEEEE
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT--AS--H----------------------NDAVAEGDVLFA 413 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~--~~--~----------------------~~~l~~G~~~~I 413 (442)
|....+.|+.+.++.-......+.+.|++|++|++.+.. .+ + ...|++||+|.|
T Consensus 43 ~~gvs~~R~~i~pggl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~vi 122 (496)
T 3ksc_A 43 CAGVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAV 122 (496)
T ss_dssp HHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEE
T ss_pred cCCceEEEEEecCCCEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEE
Confidence 346788899998764321112367999999999998753 21 2 248999999999
Q ss_pred cCCCcEEEEe--cCcEEEEEEE
Q 013464 414 PANTEINITT--SSKLQLYRAG 433 (442)
Q Consensus 414 pa~~~~~i~~--~~~~~~~~a~ 433 (442)
|++....+.+ +.++.++.++
T Consensus 123 PaG~~h~~~N~G~~~lv~v~~~ 144 (496)
T 3ksc_A 123 PTGIVFWMYNDQDTPVIAVSLT 144 (496)
T ss_dssp CTTCEEEEEECSSSCEEEEEEE
T ss_pred CCCCcEEEEcCCCCCEEEEEEe
Confidence 9999844544 3455555544
No 109
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=90.74 E-value=0.1 Score=42.93 Aligned_cols=20 Identities=25% Similarity=0.270 Sum_probs=18.3
Q ss_pred eECCCCCEEEecCCCceeee
Q 013464 282 VKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 282 v~l~pGd~i~ipaGt~HAy~ 301 (442)
+.|++||++|||||++|.+.
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~ 94 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVA 94 (112)
T ss_dssp EEECTTEEEEECTTCCEEEE
T ss_pred EEECCCCEEEECCCCcEEEE
Confidence 57999999999999999974
No 110
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=90.67 E-value=2 Score=40.81 Aligned_cols=73 Identities=21% Similarity=0.233 Sum_probs=53.2
Q ss_pred eEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcC
Q 013464 363 FEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVN 435 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~ 435 (442)
-.+..+.++++.++.++...+...+.|++|+++|... ++...+..||.+++..+..+++++..+.+++..-++
T Consensus 182 ~~~~~~~L~~g~~~~~~~~~~~~~l~v~~G~v~v~g~~~~~~~l~~gd~~~l~~~~~l~l~a~~~a~~LL~dl~ 255 (256)
T 2vec_A 182 VWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLP 255 (256)
T ss_dssp CEEEEEEECTTCEEEEECSSSEEEEEEEESCEEEEETTEEEEEECTTCEEEEESCSEEEEEESSSEEEEEEEEC
T ss_pred cEEEEEEECCCCEEEEecCCCeEEEEEEECEEEECCccccceEECCCCEEEECCCCeEEEEeCCCCEEEEEEec
Confidence 3456667888877665543445888899999999752 234679999999999777788887667777665443
No 111
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=90.52 E-value=1.6 Score=40.60 Aligned_cols=72 Identities=17% Similarity=0.205 Sum_probs=46.8
Q ss_pred EEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe-cCcEEEEEE
Q 013464 354 TRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT-SSKLQLYRA 432 (442)
Q Consensus 354 ~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a 432 (442)
.+|....+ .+.-+++++|..+......+..| +||+|+.+-. ...+.+|+-+-.|++....... +..+++|+=
T Consensus 139 ~L~~~~~E--~v~l~r~~~G~~~~~~~hgG~Ei-lVL~G~~~d~----~~~~~~GsWlR~P~gs~h~~~ag~~g~~i~~k 211 (223)
T 3o14_A 139 LLHEDERE--TVTHRKLEPGANLTSEAAGGIEV-LVLDGDVTVN----DEVLGRNAWLRLPEGEALSATAGARGAKIWMK 211 (223)
T ss_dssp EEEECSSC--EEEEEEECTTCEEEECCSSCEEE-EEEEEEEEET----TEEECTTEEEEECTTCCEEEEEEEEEEEEEEE
T ss_pred EEecCCCc--EEEEEEECCCCccCCCCCCcEEE-EEEEeEEEEC----CceECCCeEEEeCCCCccCcEECCCCeEEEEE
Confidence 34553332 34445556777665444456665 8999986532 2689999999999998766554 456667653
No 112
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=90.21 E-value=4.2 Score=38.21 Aligned_cols=69 Identities=17% Similarity=0.100 Sum_probs=49.8
Q ss_pred eEEEEEEeCCCCeeeccCCCC-eEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEcC
Q 013464 363 FEVDCCILPKGTSSVFPAVSG-PSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGVN 435 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~~~-~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~ 435 (442)
-.+..++++++.++.++...+ -..+.|++|+++|.. ..+..|+.+++..+..+++++..+.+++....+
T Consensus 160 ~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~g----~~l~~gd~~~~~~~~~l~l~a~~~a~~Ll~~~~ 229 (242)
T 1tq5_A 160 MELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTING----VKASTSDGLAIWDEQAISIHADSDSEVLLFDLP 229 (242)
T ss_dssp CEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEETT----EEEETTCEEEEESCSCEEEEESSSEEEEEEEEC
T ss_pred CEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEECC----EEeCCCCEEEECCCCeEEEEeCCCCEEEEEECC
Confidence 456667778787766543333 456788999999842 479999999999877788987666777665443
No 113
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=90.11 E-value=0.16 Score=42.58 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=20.1
Q ss_pred eeECCCCCEEEecCCCceeeecC
Q 013464 281 YVKLNPGQALYLGANEPHAYISG 303 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~G 303 (442)
.+.|++||+++||+|+.|.+-..
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~~~ 100 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIRSH 100 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEEcC
Confidence 56799999999999999998643
No 114
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=90.03 E-value=0.15 Score=41.13 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=19.7
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
.+.++|||++++|+|++|++..
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~ 89 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRS 89 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEe
Confidence 4679999999999999999764
No 115
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=90.00 E-value=1 Score=46.58 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=49.6
Q ss_pred ceEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEeC----CcEE--EeCcccEEEEcCCCcEEEEe-cCcEEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLTA----SHND--AVAEGDVLFAPANTEINITT-SSKLQLYRAG 433 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~~----~~~~--~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~ 433 (442)
..++.++.+.+|..... .......|++|++|++.+..- ...+ .|++||+++||++....+.+ +.++.++.++
T Consensus 321 ~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng~~~~~~l~~~ 400 (459)
T 2e9q_A 321 RLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASDRGFEWIAFK 400 (459)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred ccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeCCCCeEEEEEe
Confidence 57888888877643221 112457999999999998642 2334 39999999999999844443 4456665555
Q ss_pred c
Q 013464 434 V 434 (442)
Q Consensus 434 ~ 434 (442)
.
T Consensus 401 ~ 401 (459)
T 2e9q_A 401 T 401 (459)
T ss_dssp S
T ss_pred c
Confidence 3
No 116
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=89.92 E-value=0.14 Score=41.78 Aligned_cols=21 Identities=5% Similarity=0.022 Sum_probs=19.2
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.|+|||++++|+|++|++-
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~ 89 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWK 89 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEE
Confidence 577999999999999999974
No 117
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=89.82 E-value=2.2 Score=35.37 Aligned_cols=60 Identities=20% Similarity=0.356 Sum_probs=45.0
Q ss_pred CCCCeeeccCCCCeEEEEEEcCcEEEEeCC--cEEEeCcccEEEEcCCCcEEEEecCcEEEEEE
Q 013464 371 PKGTSSVFPAVSGPSIFLVTDGEGSMLTAS--HNDAVAEGDVLFAPANTEINITTSSKLQLYRA 432 (442)
Q Consensus 371 ~~~~~~~~~~~~~~~il~v~~G~~~i~~~~--~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a 432 (442)
++.+.+.+.+ ..+.+..|+.|+.++.-.+ +...++.|++|-|||+..+.++-.. ..-|.+
T Consensus 46 PGe~~YtF~T-~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~-~~~Y~C 107 (111)
T 3hqx_A 46 PTEQPLTFET-HVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDE-VLDYVC 107 (111)
T ss_dssp CCSSCEEEEC-SSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSS-CEEEEE
T ss_pred ccccceEEcC-CCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECc-ceeEEE
Confidence 3333466654 6799999999999997644 5799999999999999998887643 333443
No 118
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=89.73 E-value=0.16 Score=41.80 Aligned_cols=21 Identities=38% Similarity=0.597 Sum_probs=19.1
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
...|+|||+++||+|++|++.
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~~~ 95 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHDVN 95 (114)
T ss_dssp EEEECTTEEEEECTTCCEEEE
T ss_pred EEEECCCCEEEECCCCcEEEE
Confidence 467999999999999999975
No 119
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=89.55 E-value=0.17 Score=40.20 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=19.8
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
....+++||++++|+|++|.+.
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~ 80 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVI 80 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEE
T ss_pred EEEEEcCCCEEEeCCCCcccCE
Confidence 3578999999999999999975
No 120
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=89.51 E-value=0.23 Score=44.92 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=40.9
Q ss_pred CeEEEEEEcCcEEEEe--CCcE--EEeCcccEEEEcCCCcEEEEe--cCcEEEEEEEcCCC
Q 013464 383 GPSIFLVTDGEGSMLT--ASHN--DAVAEGDVLFAPANTEINITT--SSKLQLYRAGVNSR 437 (442)
Q Consensus 383 ~~~il~v~~G~~~i~~--~~~~--~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~~~~~ 437 (442)
...|.+|++|++.+.. +++. +.+++||.++||++..-.+.. +..+..++.|.+.+
T Consensus 100 ~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~ 160 (179)
T 1zrr_A 100 EDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPE 160 (179)
T ss_dssp SCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGG
T ss_pred hheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCC
Confidence 4689999999998854 5554 569999999999999743433 33477777777655
No 121
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=89.35 E-value=0.21 Score=39.12 Aligned_cols=22 Identities=32% Similarity=0.455 Sum_probs=19.6
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
.+.+++||++++|+|++|++..
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~ 89 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRN 89 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEe
Confidence 5679999999999999999853
No 122
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=88.81 E-value=0.75 Score=47.61 Aligned_cols=72 Identities=15% Similarity=0.096 Sum_probs=51.0
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe--C--Cc------------------------------------
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT--A--SH------------------------------------ 401 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~--~--~~------------------------------------ 401 (442)
-+++.|+.+.++.......++.+.+++|++|++.+.. . .+
T Consensus 49 gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~h 128 (465)
T 3qac_A 49 GVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQH 128 (465)
T ss_dssp TCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC------------------------------CCCC
T ss_pred ceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhccccccccccccccccccccccccccccc
Confidence 5888899998764332222478999999999997752 1 11
Q ss_pred --EEEeCcccEEEEcCCCcEEEEe--cCcEEEEEEE
Q 013464 402 --NDAVAEGDVLFAPANTEINITT--SSKLQLYRAG 433 (442)
Q Consensus 402 --~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a~ 433 (442)
...+++||+++||++...-+.+ +.++.++..+
T Consensus 129 qk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~ 164 (465)
T 3qac_A 129 QKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILI 164 (465)
T ss_dssp CCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEE
Confidence 3489999999999999866665 3455555544
No 123
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=88.66 E-value=0.8 Score=44.20 Aligned_cols=55 Identities=9% Similarity=0.195 Sum_probs=45.0
Q ss_pred CeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCc-EEEEec---CcEEEEEEEcCCC
Q 013464 383 GPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTE-INITTS---SKLQLYRAGVNSR 437 (442)
Q Consensus 383 ~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~-~~i~~~---~~~~~~~a~~~~~ 437 (442)
.=.+++.+.|.++|+.+++++.|..-++++||.+.+ +++.+. .+++++++..|..
T Consensus 79 rE~~iV~l~G~~~V~vdG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAPa~ 137 (282)
T 1xru_A 79 RELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAPAH 137 (282)
T ss_dssp EEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEECS
T ss_pred cEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccccC
Confidence 345677889999999999999999999999999997 777642 3588888877654
No 124
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=88.50 E-value=2.2 Score=38.21 Aligned_cols=58 Identities=16% Similarity=0.216 Sum_probs=42.0
Q ss_pred CCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCC----cEEEeCcccEEEEcCCCc
Q 013464 360 FDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTAS----HNDAVAEGDVLFAPANTE 418 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~----~~~~l~~G~~~~Ipa~~~ 418 (442)
..+|.|.++.-+. .....-..++..++++++|+.+|...+ ..+.|+.||.++||+++.
T Consensus 33 d~~~~V~~v~Gpn-~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvp 94 (174)
T 1yfu_A 33 DSDFIVTVVGGPN-HRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVR 94 (174)
T ss_dssp SCSEEEEEECSCB-CCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCC
T ss_pred CCcEEEEEEcCCC-cCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCC
Confidence 3567777775321 112222346789999999999997532 389999999999999987
No 125
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=88.37 E-value=0.31 Score=39.21 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=18.4
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.+++||++|||+|+.|.+.
T Consensus 60 ~~~l~~G~~~~ip~G~~H~~~ 80 (98)
T 3lag_A 60 LAQLKTGRSYARKAGVQHDVR 80 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEB
T ss_pred EEEecCCcEEEEcCCCcEECE
Confidence 345899999999999999975
No 126
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=88.30 E-value=1.7 Score=44.93 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=52.2
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe--C---C------------------------------------
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT--A---S------------------------------------ 400 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~--~---~------------------------------------ 400 (442)
.+++.++++..+.-.-....+.+.+++|++|.+++.. . .
T Consensus 42 gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (466)
T 3kgl_A 42 GVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQ 121 (466)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC------------------------
T ss_pred CeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhccccccccccccccccccccccccccccccccc
Confidence 6999999998764322222357899999999987741 1 0
Q ss_pred -----------------------cEEEeCcccEEEEcCCCcEEEEec--CcEEEEEEEcC
Q 013464 401 -----------------------HNDAVAEGDVLFAPANTEINITTS--SKLQLYRAGVN 435 (442)
Q Consensus 401 -----------------------~~~~l~~G~~~~Ipa~~~~~i~~~--~~~~~~~a~~~ 435 (442)
+...|++||++.|||++...+.+. .++.++....+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 122 GQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDL 181 (466)
T ss_dssp -----------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred cccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcC
Confidence 014899999999999998777763 45666665533
No 127
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=88.12 E-value=0.25 Score=39.50 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=19.5
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
...+++||+++||+|++|++..
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~ 84 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRN 84 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEc
Confidence 4679999999999999999763
No 128
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=88.06 E-value=0.22 Score=39.72 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=19.3
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
...+++||++++|+|++|++..
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~ 96 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRA 96 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEE
T ss_pred EEEECCCCEEEeCCCCcEEEEE
Confidence 4679999999999999999653
No 129
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=88.00 E-value=0.29 Score=39.64 Aligned_cols=22 Identities=14% Similarity=0.350 Sum_probs=19.4
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
...++|||++++|+|++|++..
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~ 94 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVC 94 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred EEEeCCCCEEEECcCCceeeEe
Confidence 4679999999999999999753
No 130
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=87.99 E-value=0.89 Score=39.34 Aligned_cols=50 Identities=20% Similarity=0.274 Sum_probs=38.0
Q ss_pred CCeEEEEEEcCcEEEEeC--------CcEEEeCcccEEEEcCCCcEEEEecCcEEEEE
Q 013464 382 SGPSIFLVTDGEGSMLTA--------SHNDAVAEGDVLFAPANTEINITTSSKLQLYR 431 (442)
Q Consensus 382 ~~~~il~v~~G~~~i~~~--------~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~ 431 (442)
+.-.+++|++|+.+|... ...+.+++|+.+.||.++.-+-..+....++.
T Consensus 49 ~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLL 106 (140)
T 3d0j_A 49 STDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMY 106 (140)
T ss_dssp SCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEE
T ss_pred CCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEEEE
Confidence 467899999999999765 34799999999999999984444444444443
No 131
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=87.83 E-value=0.21 Score=39.34 Aligned_cols=22 Identities=14% Similarity=0.277 Sum_probs=19.5
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
...+++||+++||+|++|++..
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~ 90 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMA 90 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEc
Confidence 5679999999999999999754
No 132
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=87.69 E-value=1.9 Score=34.73 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=39.3
Q ss_pred eeccCCCCeEEEEEEcCcEEEEeCC--cEEEeCcccEEEEcCCCcEEEEec
Q 013464 376 SVFPAVSGPSIFLVTDGEGSMLTAS--HNDAVAEGDVLFAPANTEINITTS 424 (442)
Q Consensus 376 ~~~~~~~~~~il~v~~G~~~i~~~~--~~~~l~~G~~~~Ipa~~~~~i~~~ 424 (442)
+.+.+ ..+.+..|++|+.++.-.+ +...++.|++|.|||+..+.++-.
T Consensus 35 ytF~T-~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~ 84 (94)
T 2oyz_A 35 YTFGT-QAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVK 84 (94)
T ss_dssp EEEEE-SSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEES
T ss_pred EEEcC-CCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEc
Confidence 45443 5789999999999997643 479999999999999998888764
No 133
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=87.35 E-value=1.6 Score=45.68 Aligned_cols=72 Identities=14% Similarity=0.181 Sum_probs=48.9
Q ss_pred ceEEEEEEeCCCCeeeccC-CCCeEEEEEEcCcEEEEe-C--Cc---EEEeCcccEEEEcCCCc-EEEEecCcEEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVFPA-VSGPSIFLVTDGEGSMLT-A--SH---NDAVAEGDVLFAPANTE-INITTSSKLQLYRAG 433 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~-~~~~~il~v~~G~~~i~~-~--~~---~~~l~~G~~~~Ipa~~~-~~i~~~~~~~~~~a~ 433 (442)
..++.++.+.++.....-. .....+++|++|++++.. + +. +..|++||+++||++.. +...++.++.+ .++
T Consensus 393 giS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag~e~l~f-laF 471 (531)
T 3fz3_A 393 RLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEY-FAF 471 (531)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEE-EEE
T ss_pred ceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecCCCCEEE-EEE
Confidence 4688889998775432211 235789999999999864 2 22 56899999999999997 44433334444 466
Q ss_pred c
Q 013464 434 V 434 (442)
Q Consensus 434 ~ 434 (442)
.
T Consensus 472 ~ 472 (531)
T 3fz3_A 472 K 472 (531)
T ss_dssp E
T ss_pred e
Confidence 3
No 134
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=87.29 E-value=0.24 Score=40.46 Aligned_cols=20 Identities=15% Similarity=0.205 Sum_probs=18.1
Q ss_pred ECCCCCEEEecCCCceeeec
Q 013464 283 KLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 283 ~l~pGd~i~ipaGt~HAy~~ 302 (442)
.+++||+++||+|++|++..
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~ 88 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQN 88 (117)
T ss_dssp EEETTCEEEECTTCEEEEEC
T ss_pred EeCCCCEEEECCCCcEEeEc
Confidence 68999999999999999753
No 135
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=86.98 E-value=0.23 Score=40.94 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=18.9
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.+++||++++|+|++|++.
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~~~ 100 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHGAM 100 (125)
T ss_dssp EEEEETTEEEEECTTCCCEEE
T ss_pred EEEeCCCCEEEECCCCEEEeE
Confidence 467999999999999999975
No 136
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=86.92 E-value=0.34 Score=40.75 Aligned_cols=23 Identities=26% Similarity=0.790 Sum_probs=20.0
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
..+.+++||++++|+|++|++..
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~~~~ 101 (145)
T 3ht1_A 79 RTEEVGPGEAIFIPRGEPHGFVT 101 (145)
T ss_dssp EEEEECTTCEEEECTTCCBEEEC
T ss_pred EEEEECCCCEEEECCCCeEEeEc
Confidence 35779999999999999999753
No 137
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=86.52 E-value=0.34 Score=39.91 Aligned_cols=21 Identities=24% Similarity=0.200 Sum_probs=19.1
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
...+++||+++||+|++|++.
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~ 100 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHRAR 100 (126)
T ss_dssp EEEECTTEEEEECTTCCEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeE
Confidence 467999999999999999985
No 138
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=86.50 E-value=0.46 Score=42.45 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=20.8
Q ss_pred ceeeECCCCCEEEecCCCceeee
Q 013464 279 FNYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 279 Ln~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.....|++||++++|+|++|.+.
T Consensus 82 ~~~~~l~~GDv~~~P~g~~H~~~ 104 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQAGTPFYLI 104 (178)
T ss_dssp EEEEEEETTEEEEECTTCCEEEE
T ss_pred cEEEEECCCCEEEECCCCeEEEE
Confidence 56789999999999999999975
No 139
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=86.48 E-value=4.1 Score=36.49 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=43.7
Q ss_pred EEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeC--C------cEEEeCcccEEEEcCCCc
Q 013464 354 TRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTA--S------HNDAVAEGDVLFAPANTE 418 (442)
Q Consensus 354 ~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~--~------~~~~l~~G~~~~Ipa~~~ 418 (442)
.++. .+|.|.++.-+.. ....-......++++++|+..|... + ..+.|+.||.|++|+++.
T Consensus 29 ~v~~---~~~~V~~vgGPn~-r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvp 97 (176)
T 1zvf_A 29 CLHK---GGFTVMIVGGPNE-RTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVP 97 (176)
T ss_dssp EEEC---SSEEEEEECSSBC-CSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCC
T ss_pred EEec---CCEEEEEEcCCCc-CCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCC
Confidence 4554 4788877753212 1222234678999999999999642 3 379999999999999987
No 140
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=86.39 E-value=0.33 Score=39.24 Aligned_cols=22 Identities=27% Similarity=0.455 Sum_probs=19.4
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
...+++||++++|+|++|++..
T Consensus 79 ~~~l~~Gd~~~ip~~~~H~~~~ 100 (115)
T 1yhf_A 79 TYRVAEGQTIVMPAGIPHALYA 100 (115)
T ss_dssp EEEEETTCEEEECTTSCEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEE
Confidence 4679999999999999999754
No 141
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=86.18 E-value=0.32 Score=42.75 Aligned_cols=23 Identities=9% Similarity=0.255 Sum_probs=19.9
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
..+.++|||++|||+|+.|.+-.
T Consensus 102 ~~~~l~~GD~i~iP~G~~h~~~n 124 (151)
T 4axo_A 102 RKVSASSGELIFIPKGSKIQFSV 124 (151)
T ss_dssp EEEEEETTCEEEECTTCEEEEEE
T ss_pred EEEEEcCCCEEEECCCCEEEEEe
Confidence 35679999999999999999753
No 142
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=86.08 E-value=4.1 Score=42.46 Aligned_cols=70 Identities=16% Similarity=0.175 Sum_probs=46.0
Q ss_pred eEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEe--C-Cc-E--EEeCcccEEEEcCCCc-EEEEecCcEEEEEE
Q 013464 363 FEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLT--A-SH-N--DAVAEGDVLFAPANTE-INITTSSKLQLYRA 432 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~--~-~~-~--~~l~~G~~~~Ipa~~~-~~i~~~~~~~~~~a 432 (442)
.++.++.+.++.-... .......|++|++|++.+.. . +. . ..|++||+++||++.. +...++.++.++..
T Consensus 358 iS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~~e~~~~l~f 435 (496)
T 3ksc_A 358 LSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLSDRFSYVAF 435 (496)
T ss_dssp CEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEE
T ss_pred eeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEeCCCCEEEEEE
Confidence 3778888876643221 11245789999999998853 2 22 3 3499999999999998 44333444555443
No 143
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=85.98 E-value=0.33 Score=40.58 Aligned_cols=23 Identities=17% Similarity=0.234 Sum_probs=20.2
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
..+.+++||+++||+|++|.+..
T Consensus 83 ~~~~l~~Gd~~~ip~g~~H~~~~ 105 (134)
T 2o8q_A 83 GAVMLEAGGSAFQPPGVRHRELR 105 (134)
T ss_dssp EEEEEETTCEEECCTTCCEEEEE
T ss_pred EEEEecCCCEEEECCCCcEEeEe
Confidence 45779999999999999999864
No 144
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=85.12 E-value=0.39 Score=40.98 Aligned_cols=21 Identities=5% Similarity=0.211 Sum_probs=19.1
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.+++||++++|+|++|.+-
T Consensus 94 ~~~l~~GD~i~~p~g~~h~~~ 114 (133)
T 2pyt_A 94 TMIAKAGDVMFIPKGSSIEFG 114 (133)
T ss_dssp EEEEETTCEEEECTTCEEEEE
T ss_pred EEEECCCcEEEECCCCEEEEE
Confidence 457999999999999999985
No 145
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=85.04 E-value=3.2 Score=42.93 Aligned_cols=72 Identities=15% Similarity=0.220 Sum_probs=47.5
Q ss_pred ceEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEe--C-Cc---EEEeCcccEEEEcCCCc-EEEEecCcEEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLT--A-SH---NDAVAEGDVLFAPANTE-INITTSSKLQLYRAG 433 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~--~-~~---~~~l~~G~~~~Ipa~~~-~~i~~~~~~~~~~a~ 433 (442)
..++.++.+.++.-... .......+++|++|++.+.. . +. ...|++||+++||++.. +...+++++.++..+
T Consensus 322 giS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag~e~~~~l~~f 401 (466)
T 3kgl_A 322 RLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFK 401 (466)
T ss_dssp TCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEE
T ss_pred ceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEEcCCCCEEEEEEE
Confidence 46778888876643221 11245689999999998863 2 22 33599999999999998 433334455655544
No 146
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=84.72 E-value=0.39 Score=39.69 Aligned_cols=22 Identities=14% Similarity=0.252 Sum_probs=19.5
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
....++|||+++||+|++|++.
T Consensus 66 ~~~~l~~Gd~i~i~~~~~H~~~ 87 (125)
T 3cew_A 66 EKIELQAGDWLRIAPDGKRQIS 87 (125)
T ss_dssp EEEEEETTEEEEECTTCCEEEE
T ss_pred EEEEeCCCCEEEECCCCcEEEE
Confidence 3567999999999999999975
No 147
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=84.60 E-value=3.1 Score=34.14 Aligned_cols=48 Identities=15% Similarity=0.208 Sum_probs=39.4
Q ss_pred eeeccCCCCeEEEEEEcCcEEEEeCC--cEEEeCcccEEEEcCCCcEEEEe
Q 013464 375 SSVFPAVSGPSIFLVTDGEGSMLTAS--HNDAVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 375 ~~~~~~~~~~~il~v~~G~~~i~~~~--~~~~l~~G~~~~Ipa~~~~~i~~ 423 (442)
.+.+.+ ..+.+..|++|+.++.-.+ +...++.|++|.|||+..+.++-
T Consensus 47 eY~F~T-~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 47 VYTLSS-EVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EEEECC-SSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred EEEecC-CCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEE
Confidence 355543 6799999999999998644 57999999999999999987764
No 148
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=84.55 E-value=0.55 Score=37.85 Aligned_cols=24 Identities=17% Similarity=0.200 Sum_probs=20.3
Q ss_pred eeECCCCCEEEecCCCceeeec-Cc
Q 013464 281 YVKLNPGQALYLGANEPHAYIS-GE 304 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~-G~ 304 (442)
.+.+++||++++|+|+.|.+.. |+
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECSS
T ss_pred EEEECCCCEEEECCCCceeCEECCC
Confidence 4579999999999999999863 44
No 149
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=84.54 E-value=0.46 Score=41.33 Aligned_cols=22 Identities=14% Similarity=0.283 Sum_probs=20.1
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
..+.+++||+++||+|++|.+.
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~ 109 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVW 109 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEE
T ss_pred EEEEeCCCCEEEECCCCcEEeE
Confidence 5678999999999999999975
No 150
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=84.48 E-value=0.41 Score=41.07 Aligned_cols=20 Identities=15% Similarity=0.036 Sum_probs=18.6
Q ss_pred eECCCCCEEEecCCCceeee
Q 013464 282 VKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 282 v~l~pGd~i~ipaGt~HAy~ 301 (442)
+.|++||+++||+|++|.+.
T Consensus 90 ~~l~~Gd~i~ip~g~~H~~~ 109 (148)
T 2oa2_A 90 EEVFDDYAILIPAGTWHNVR 109 (148)
T ss_dssp EEEETTCEEEECTTCEEEEE
T ss_pred EEECCCCEEEECCCCcEEEE
Confidence 67999999999999999975
No 151
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=84.45 E-value=0.42 Score=40.29 Aligned_cols=21 Identities=10% Similarity=0.145 Sum_probs=18.8
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.|++||++++|+|++|.+-
T Consensus 88 ~~~l~~GD~~~ip~g~~h~~~ 108 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGYTGRWE 108 (123)
T ss_dssp EEEEETTCEEEECTTCCCEEE
T ss_pred EEEECCCCEEEECCCCeEEEE
Confidence 467999999999999999974
No 152
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=84.39 E-value=0.41 Score=43.73 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=20.2
Q ss_pred eeECCCCCEEEecCCCceeeecC
Q 013464 281 YVKLNPGQALYLGANEPHAYISG 303 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~G 303 (442)
.+.+++||.|+||+|++|.+..+
T Consensus 128 ~i~v~~GDlIiIPaG~~H~f~~~ 150 (191)
T 1vr3_A 128 RISMEKGDMITLPAGIYHRFTLD 150 (191)
T ss_dssp EEEEETTEEEEECTTCCEEEEEC
T ss_pred EEEECCCCEEEECcCCcCCcccC
Confidence 46899999999999999987654
No 153
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=84.38 E-value=0.53 Score=42.13 Aligned_cols=22 Identities=23% Similarity=0.539 Sum_probs=20.0
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
..+.|++||++|+|+|++|++.
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~~~ 183 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHAFT 183 (198)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred ccEEECCCCEEEeCCCCceEEE
Confidence 4678999999999999999976
No 154
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=84.34 E-value=0.47 Score=39.13 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=19.1
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.+++||+++||+|++|++.
T Consensus 73 ~~~l~~Gd~~~i~~~~~H~~~ 93 (128)
T 4i4a_A 73 DFPVTKGDLIIIPLDSEHHVI 93 (128)
T ss_dssp EEEEETTCEEEECTTCCEEEE
T ss_pred EEEECCCcEEEECCCCcEEeE
Confidence 567999999999999999975
No 155
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=84.20 E-value=0.55 Score=41.47 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=19.0
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.|++||+++||+|++|.+.
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~ 115 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIH 115 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred EEEECCCCEEEECCCCcEEEE
Confidence 567999999999999999975
No 156
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=84.12 E-value=0.57 Score=39.93 Aligned_cols=23 Identities=26% Similarity=0.342 Sum_probs=20.5
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
+...+++||.++||+|++|.+..
T Consensus 56 ~~~~l~~Gd~~~i~p~~~H~~~~ 78 (164)
T 2arc_A 56 REFVCRPGDILLFPPGEIHHYGR 78 (164)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred EEEEecCCeEEEEcCCCCEEEEe
Confidence 56789999999999999999764
No 157
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=84.07 E-value=0.48 Score=41.55 Aligned_cols=21 Identities=10% Similarity=0.256 Sum_probs=19.1
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
...|+|||+++||+|++|++.
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~~~ 103 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQFR 103 (156)
T ss_dssp EEEEETTCEEEECTTCCEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeE
Confidence 567999999999999999975
No 158
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=83.83 E-value=0.59 Score=41.43 Aligned_cols=21 Identities=10% Similarity=0.066 Sum_probs=19.2
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
...+++||+++||+|++|.+.
T Consensus 92 ~~~l~~GD~i~ip~g~~H~~~ 112 (166)
T 3jzv_A 92 VSAVAPYDLVTIPGWSWHQFR 112 (166)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeE
Confidence 567999999999999999985
No 159
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=83.78 E-value=4.1 Score=42.05 Aligned_cols=71 Identities=10% Similarity=0.193 Sum_probs=46.7
Q ss_pred eEEEEEEeCCCCeeec-cCCCCeEEEEEEcCcEEEEe--C-Cc-E--EEeCcccEEEEcCCCc-EEEEecCcEEEEEEE
Q 013464 363 FEVDCCILPKGTSSVF-PAVSGPSIFLVTDGEGSMLT--A-SH-N--DAVAEGDVLFAPANTE-INITTSSKLQLYRAG 433 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~-~~~~~~~il~v~~G~~~i~~--~-~~-~--~~l~~G~~~~Ipa~~~-~~i~~~~~~~~~~a~ 433 (442)
.++.++.+.++.-... .......|++|++|++.+.. . +. . ..|++||+++||.+.. +...+++++.++..+
T Consensus 323 iS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~ag~e~~~~l~f~ 401 (465)
T 3qac_A 323 LSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQAFEDGFEWVSFK 401 (465)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEE
T ss_pred eeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEEEEcCCCCeEEEEEe
Confidence 4778888877643221 11245789999999998853 2 22 3 3499999999999997 444344455555433
No 160
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=83.46 E-value=0.56 Score=41.84 Aligned_cols=22 Identities=23% Similarity=0.611 Sum_probs=19.5
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
.+.|++||++|+|+|++|++..
T Consensus 145 ~~~l~~GD~i~i~~~~~H~~~n 166 (192)
T 1y9q_A 145 WHELQQGEHIRFFSDQPHGYAA 166 (192)
T ss_dssp EEEECTTCEEEEECSSSEEEEE
T ss_pred EEEeCCCCEEEEcCCCCeEeEC
Confidence 4579999999999999999864
No 161
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=83.32 E-value=2.9 Score=37.89 Aligned_cols=67 Identities=19% Similarity=0.147 Sum_probs=47.4
Q ss_pred ceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 362 EFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
...+..+++.+|..+..-.+.+..+.+|++|..+ ++...+.+||.+.+|++..-...+ ++++.+|.+
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~----de~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR----DETDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE----CSSSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred CcEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE----CCcEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 4566777887776554344567899999999854 334689999999999998744433 445666654
No 162
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=82.88 E-value=0.5 Score=39.31 Aligned_cols=22 Identities=18% Similarity=0.359 Sum_probs=19.5
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
...+++||++++|+|++|++..
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~ 108 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRN 108 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEEC
T ss_pred EEEECCCCEEEECCCCcEEeEe
Confidence 4679999999999999999863
No 163
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=82.80 E-value=0.69 Score=41.71 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=19.4
Q ss_pred eECCCCCEEEecCCCceeeecC
Q 013464 282 VKLNPGQALYLGANEPHAYISG 303 (442)
Q Consensus 282 v~l~pGd~i~ipaGt~HAy~~G 303 (442)
+.+++||.|+||+|++|....+
T Consensus 124 ~~l~~GDli~IP~g~~H~~~~~ 145 (179)
T 1zrr_A 124 VLCEKNDLISVPAHTPHWFDMG 145 (179)
T ss_dssp EECCCSCEEEECTTCCBCCCCS
T ss_pred EEECCCCEEEECCCCeEeeecC
Confidence 6699999999999999987654
No 164
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=82.05 E-value=0.63 Score=42.43 Aligned_cols=21 Identities=24% Similarity=0.316 Sum_probs=18.7
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.|+|||++|||+|-.|...
T Consensus 202 ~~~l~pGD~LyiP~gW~H~V~ 222 (235)
T 4gjz_A 202 SCILSPGEILFIPVKYWHYVR 222 (235)
T ss_dssp EEEECTTCEEEECTTCEEEEE
T ss_pred EEEECCCCEEEeCCCCcEEEE
Confidence 578999999999999999843
No 165
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=81.89 E-value=0.56 Score=39.49 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=19.5
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
...|+|||++++|+|++|++..
T Consensus 97 ~~~l~~Gd~i~i~~~~~H~~~n 118 (133)
T 1o4t_A 97 DVPIKAGDVCFTDSGESHSIEN 118 (133)
T ss_dssp EEEEETTEEEEECTTCEEEEEC
T ss_pred EEEeCCCcEEEECCCCcEEeEE
Confidence 5679999999999999999763
No 166
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=81.78 E-value=0.59 Score=44.06 Aligned_cols=23 Identities=17% Similarity=0.400 Sum_probs=20.4
Q ss_pred ceeeECCCCCEEEecCCCceeee
Q 013464 279 FNYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 279 Ln~v~l~pGd~i~ipaGt~HAy~ 301 (442)
...+.++|||++|+|+|++|++.
T Consensus 101 ~~~~~l~~GD~i~iP~g~~H~~~ 123 (239)
T 2xlg_A 101 LYSIQSEPKQLIYSPNHYMHGFV 123 (239)
T ss_dssp EEEEECCTTEEEEECTTEEEEEE
T ss_pred eeEEEECCCCEEEECCCCCEEEE
Confidence 34678999999999999999976
No 167
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=81.57 E-value=0.81 Score=39.62 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=18.9
Q ss_pred eeECCCCCEEEecCC-Cceeee
Q 013464 281 YVKLNPGQALYLGAN-EPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaG-t~HAy~ 301 (442)
.+.+++||++++|+| ++|.+-
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~~~ 108 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHSIS 108 (162)
T ss_dssp EEEECTTCEEEECTTSCCEEEE
T ss_pred EEEeCCCCEEEECCCCceEEeE
Confidence 567999999999998 999975
No 168
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=81.52 E-value=0.83 Score=42.45 Aligned_cols=25 Identities=36% Similarity=0.493 Sum_probs=21.3
Q ss_pred eeeECCCCCEEEecCCCceeeecCc
Q 013464 280 NYVKLNPGQALYLGANEPHAYISGE 304 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~G~ 304 (442)
+.+.++|||++|+|+|++||.-.++
T Consensus 171 ~~~~l~pGd~v~ipsgv~Ha~rt~d 195 (217)
T 4b29_A 171 PDLMLEPGQTRFHPANAPHAMTTLT 195 (217)
T ss_dssp CCEEECTTCEEEECTTCCEEEECCS
T ss_pred CEEecCCCCEEEcCCCCceeEEECC
Confidence 3578999999999999999976554
No 169
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=81.02 E-value=20 Score=32.73 Aligned_cols=82 Identities=6% Similarity=-0.039 Sum_probs=57.4
Q ss_pred EEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe-----------CCcEEEeCcccEEEEcCCCc--EE
Q 013464 354 TRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT-----------ASHNDAVAEGDVLFAPANTE--IN 420 (442)
Q Consensus 354 ~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~-----------~~~~~~l~~G~~~~Ipa~~~--~~ 420 (442)
.+|..|...|.+..+...+|+...+-.+...+++.|++|+.+... .+.+..+..|+++.+++..+ -+
T Consensus 70 lL~~dp~~~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~ 149 (208)
T 2gm6_A 70 LLHCDSAERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHR 149 (208)
T ss_dssp EEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEE
T ss_pred EeecCCCCCEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEE
Confidence 467766678999999988776544334556889999999987642 12468899999999999433 45
Q ss_pred EEe---cCcEEEEEEEcC
Q 013464 421 ITT---SSKLQLYRAGVN 435 (442)
Q Consensus 421 i~~---~~~~~~~~a~~~ 435 (442)
+.+ ++....+-+|.+
T Consensus 150 V~N~~~~~~avsLHvY~~ 167 (208)
T 2gm6_A 150 VHNAYDDRVSISIHVYGA 167 (208)
T ss_dssp EEESCSSSCEEEEEEESS
T ss_pred eccCCCCCcEEEEEEEcC
Confidence 553 234555656654
No 170
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=79.93 E-value=0.93 Score=40.87 Aligned_cols=21 Identities=19% Similarity=0.582 Sum_probs=19.2
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.+.+++||+++||+|++|.+.
T Consensus 120 ~~~l~~GD~v~ip~g~~H~~~ 140 (190)
T 1x82_A 120 WISMEPGTVVYVPPYWAHRTV 140 (190)
T ss_dssp EEEECTTCEEEECTTCEEEEE
T ss_pred EEEECCCcEEEECCCCeEEEE
Confidence 468999999999999999975
No 171
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=79.11 E-value=5.4 Score=34.94 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=48.4
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEec----CcEEEEEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTS----SKLQLYRAG 433 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~----~~~~~~~a~ 433 (442)
..-.+..+++.+|..+..-.+.+....+||+|+.+.... ...+.+|+.++.|++..-+.... +++.++.+.
T Consensus 40 ~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~e~--~~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~~ 114 (159)
T 3ebr_A 40 RGETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYKEH--DWVAHAGSVVYETASTRHTPQSAYAEGPDIITFNIV 114 (159)
T ss_dssp TTEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEETTS--SCCBCTTCEEEECSSEEECEEESSSSSSCEEEEEEE
T ss_pred CCeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEeCC--CeEECCCeEEEECCCCcceeEeCCCCCCCEEEEEEe
Confidence 345667778877765433334568889999999886422 24799999999999986444333 456666643
No 172
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=78.93 E-value=0.89 Score=40.50 Aligned_cols=22 Identities=18% Similarity=0.034 Sum_probs=19.3
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
..+.|++||++|+|+|.+|.+-
T Consensus 128 ~~~~L~~Gds~~iP~g~~H~~~ 149 (166)
T 2vpv_A 128 NKFLSVKGSTFQIPAFNEYAIA 149 (166)
T ss_dssp EEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEEcCCCEEEECCCCCEEEE
Confidence 3467999999999999999975
No 173
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=78.70 E-value=0.86 Score=39.13 Aligned_cols=21 Identities=19% Similarity=0.085 Sum_probs=18.7
Q ss_pred eECCCCCEEEecCCCceeeec
Q 013464 282 VKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 282 v~l~pGd~i~ipaGt~HAy~~ 302 (442)
..+++||++++|+|++|++..
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n 109 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGA 109 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEE
T ss_pred EEECCCCEEEECCCCcEEeEe
Confidence 569999999999999999763
No 174
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=78.54 E-value=13 Score=33.21 Aligned_cols=63 Identities=14% Similarity=0.119 Sum_probs=43.7
Q ss_pred CceEEEEEEeCCCCeeeccCC-C------CeEEEEEEcCcEEEEeCCcE---------------------EEeCcccEEE
Q 013464 361 DEFEVDCCILPKGTSSVFPAV-S------GPSIFLVTDGEGSMLTASHN---------------------DAVAEGDVLF 412 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~-~------~~~il~v~~G~~~i~~~~~~---------------------~~l~~G~~~~ 412 (442)
+.|....+.+.+|+....-.. . ...-++|+.|.+++..+++. +.|++||++.
T Consensus 51 ~~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvt 130 (175)
T 2y0o_A 51 DRYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYT 130 (175)
T ss_dssp SSEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEE
T ss_pred cCceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEE
Confidence 348888888887764321111 1 22445588999888776543 5999999999
Q ss_pred EcCCCcEEEEe
Q 013464 413 APANTEINITT 423 (442)
Q Consensus 413 Ipa~~~~~i~~ 423 (442)
||+++.-.+.+
T Consensus 131 Ippg~~H~f~a 141 (175)
T 2y0o_A 131 IPPNTKHWFQA 141 (175)
T ss_dssp ECTTCCEEEEE
T ss_pred ECCCCcEEEEe
Confidence 99999866655
No 175
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=77.98 E-value=1 Score=40.35 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=18.7
Q ss_pred eeECCCCCEEEecCCCceee
Q 013464 281 YVKLNPGQALYLGANEPHAY 300 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy 300 (442)
.+++++||.+.+|+|++|+-
T Consensus 78 ~v~l~eGE~f~lP~gvpH~P 97 (174)
T 1yfu_A 78 RADLKEGDIFLLPPHVRHSP 97 (174)
T ss_dssp EEEECTTCEEEECTTCCEEE
T ss_pred eEEECCCCEEEeCCCCCcCc
Confidence 69999999999999999965
No 176
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=77.11 E-value=30 Score=30.59 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=54.7
Q ss_pred EEEECCCCCceEEEEEEeCCCCeeeccCCC-CeEEEEEEcCcEEEEe----CC-----cEEEeCcccEEEEcCCCcEEEE
Q 013464 353 ITRYLPPFDEFEVDCCILPKGTSSVFPAVS-GPSIFLVTDGEGSMLT----AS-----HNDAVAEGDVLFAPANTEINIT 422 (442)
Q Consensus 353 ~~~y~~p~~~F~l~~i~~~~~~~~~~~~~~-~~~il~v~~G~~~i~~----~~-----~~~~l~~G~~~~Ipa~~~~~i~ 422 (442)
..+|. .+.|++..+...+|+.-.+-... +.+++.|++|+.+-+. ++ .+..+..|++++.|++.--++.
T Consensus 61 ~ll~~--~~~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~ 138 (171)
T 3eqe_A 61 NAIYR--NNELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMS 138 (171)
T ss_dssp EEEEE--CSSCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEE
T ss_pred EEEec--CCCeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEE
Confidence 34565 47799999998877543333334 4678889999988752 23 3678999999888876556676
Q ss_pred e--cCcEEEEEEEcC
Q 013464 423 T--SSKLQLYRAGVN 435 (442)
Q Consensus 423 ~--~~~~~~~~a~~~ 435 (442)
+ +.....+-+|.|
T Consensus 139 N~~~~~aVSlHvY~p 153 (171)
T 3eqe_A 139 NPTSERMVSLHVYSP 153 (171)
T ss_dssp CCSSSCEEEEEEEES
T ss_pred CCCCCCEEEEEEeCC
Confidence 6 334555555554
No 177
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=76.45 E-value=14 Score=37.84 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=45.1
Q ss_pred cCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEE
Q 013464 379 PAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRA 432 (442)
Q Consensus 379 ~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a 432 (442)
.+.++--++++-+|.+.|.++=..+.+++||.++||.++.+++...+..+.|++
T Consensus 174 ~NaDGD~Livpq~G~l~i~TEfG~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~ 227 (471)
T 1eyb_A 174 YNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYIL 227 (471)
T ss_dssp EESSEEEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEECSSSEEEEEE
T ss_pred ecCCCCEEEEEEeCCEEEEEecccEEeccCCEEEECCccEEEEeeCCCceEEEE
Confidence 455777788888999999998778999999999999999988876446766665
No 178
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=74.56 E-value=1.7 Score=38.02 Aligned_cols=21 Identities=19% Similarity=0.382 Sum_probs=19.1
Q ss_pred eeECCCCCEEEecCC--Cceeee
Q 013464 281 YVKLNPGQALYLGAN--EPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaG--t~HAy~ 301 (442)
.+.|++||++++|+| ++|.+.
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~ 106 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFV 106 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEE
T ss_pred EEEeCCCCEEEECCCCCcceEEE
Confidence 577999999999999 999975
No 179
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=73.97 E-value=1.4 Score=39.85 Aligned_cols=21 Identities=10% Similarity=0.088 Sum_probs=19.1
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
...+++||++++|+|++|.+.
T Consensus 120 ~~~l~~GD~~~iP~g~~H~~~ 140 (201)
T 1fi2_A 120 SRVVRAGETFVIPRGLMHFQF 140 (201)
T ss_dssp EEEEETTCEEEECTTCCEEEE
T ss_pred EEEECCCCEEEECCCCeEEEE
Confidence 567999999999999999975
No 180
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=73.15 E-value=1.6 Score=39.07 Aligned_cols=22 Identities=32% Similarity=0.508 Sum_probs=19.6
Q ss_pred ceeeECCCCCEEEecCCCceee
Q 013464 279 FNYVKLNPGQALYLGANEPHAY 300 (442)
Q Consensus 279 Ln~v~l~pGd~i~ipaGt~HAy 300 (442)
...+++++||.+.+|+|++|+-
T Consensus 79 ~~dv~i~eGdmfllP~gvpHsP 100 (176)
T 1zvf_A 79 FIDIIINEGDSYLLPGNVPHSP 100 (176)
T ss_dssp EEEEEECTTEEEEECTTCCEEE
T ss_pred eeeEEECCCCEEEcCCCCCcCC
Confidence 4468899999999999999985
No 181
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=72.91 E-value=2.3 Score=39.97 Aligned_cols=35 Identities=23% Similarity=0.503 Sum_probs=28.1
Q ss_pred ceeeECCCCCEEEecCCCceeee--cC--cE-E-EEeecCC
Q 013464 279 FNYVKLNPGQALYLGANEPHAYI--SG--EC-I-ECMATSD 313 (442)
Q Consensus 279 Ln~v~l~pGd~i~ipaGt~HAy~--~G--~~-v-Eim~~SD 313 (442)
-..+.|+|||.|-|++|+-|+.- +| .+ | |+..++|
T Consensus 171 G~~i~L~PGESiTl~Pg~~H~F~ae~g~G~vligEVSt~ND 211 (246)
T 3kmh_A 171 GSQLRLSPGESICLPPGLYHSFWAEAGFGDVLVGEVSSVND 211 (246)
T ss_dssp TCEEEECTTCEEEECTTEEEEEEECTTSCCEEEEEEEECCC
T ss_pred CCEEEECCCCeEecCCCCEEEEEecCCCccEEEEEcccCcC
Confidence 35678999999999999999964 33 34 5 9998865
No 182
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=69.64 E-value=2.1 Score=42.37 Aligned_cols=24 Identities=38% Similarity=0.473 Sum_probs=20.5
Q ss_pred eeeECCCCCEEEecCCCceeeecC
Q 013464 280 NYVKLNPGQALYLGANEPHAYISG 303 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~G 303 (442)
-.+.|+|||++|||+|..|.-.+-
T Consensus 218 ~~~~L~pGD~LyiP~gwwH~v~s~ 241 (342)
T 1vrb_A 218 EIVNLTPGTMLYLPRGLWHSTKSD 241 (342)
T ss_dssp EEEEECTTCEEEECTTCEEEEECS
T ss_pred eEEEECCCcEEEeCCCccEEEEEC
Confidence 456799999999999999986653
No 183
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=68.60 E-value=10 Score=33.37 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=41.7
Q ss_pred eEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe
Q 013464 363 FEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~ 423 (442)
=.+..+++.+|..+..-.+.+....+||+|+.... ++....+++|+.+++|++..-....
T Consensus 43 ~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~-~~~~~~~~aGd~~~~P~g~~H~~~a 102 (165)
T 3cjx_A 43 LMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT-EYPGQKQTAGCYLYEPGGSIHQFNT 102 (165)
T ss_dssp EEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET-TCTTSCEETTEEEEECTTCEECEEC
T ss_pred cEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC-CCceEEECCCeEEEeCCCCceeeEe
Confidence 34667777777554323345678899999988763 2224678999999999999744433
No 184
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=68.21 E-value=1.9 Score=43.34 Aligned_cols=19 Identities=26% Similarity=0.211 Sum_probs=16.6
Q ss_pred eECCCCCEEEecCCCceee
Q 013464 282 VKLNPGQALYLGANEPHAY 300 (442)
Q Consensus 282 v~l~pGd~i~ipaGt~HAy 300 (442)
+.-++||+||||||.+|..
T Consensus 295 ~~Q~~GeavfiPaG~~HQV 313 (392)
T 2ypd_A 295 LIQFLGDAIVLPAGALHQV 313 (392)
T ss_dssp EEEETTCEEEECTTCEEEE
T ss_pred EEEcCCCEEEecCCCHHHH
Confidence 4458999999999999994
No 185
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=68.15 E-value=19 Score=34.65 Aligned_cols=57 Identities=16% Similarity=0.318 Sum_probs=40.3
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCC-c---EEEeCcccEEEEcCCCc
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTAS-H---NDAVAEGDVLFAPANTE 418 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~-~---~~~l~~G~~~~Ipa~~~ 418 (442)
.+|.|.++.-+ +....+--.++..++++++|+..|...+ . .+.|+.||.+++|+++.
T Consensus 30 ~~~~V~~vgGp-N~R~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~ 90 (286)
T 2qnk_A 30 EQLKVMFIGGP-NTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVP 90 (286)
T ss_dssp SSEEEEEECSC-BCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCC
T ss_pred ccEEEEEEeCC-CcCccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCC
Confidence 56777777422 1111222246789999999999986432 3 79999999999999986
No 186
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=68.08 E-value=2.2 Score=44.67 Aligned_cols=22 Identities=32% Similarity=0.379 Sum_probs=19.8
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
..+.++|||.+|||+|.+||..
T Consensus 366 ~~v~l~pGEtlfIPsGW~HaV~ 387 (528)
T 3pur_A 366 KRVVIKEGQTLLIPAGWIHAVL 387 (528)
T ss_dssp EEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEECCCCEEEecCCceEEEe
Confidence 3689999999999999999964
No 187
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=66.32 E-value=2.7 Score=37.48 Aligned_cols=20 Identities=10% Similarity=0.195 Sum_probs=18.3
Q ss_pred eeECCCCCEEEecCCCceeee
Q 013464 281 YVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~ 301 (442)
...|++||++ +|+|++|+|.
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~ 138 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWR 138 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEE
T ss_pred EEEECCCCEE-EeCCCcEEEE
Confidence 5779999999 9999999985
No 188
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=66.23 E-value=21 Score=32.53 Aligned_cols=53 Identities=9% Similarity=0.077 Sum_probs=38.7
Q ss_pred CCCeEEEEEEcCcEEEEeC-CcEEEeCcccEEEEcCCCc---EEEEecCcEEEEEEE
Q 013464 381 VSGPSIFLVTDGEGSMLTA-SHNDAVAEGDVLFAPANTE---INITTSSKLQLYRAG 433 (442)
Q Consensus 381 ~~~~~il~v~~G~~~i~~~-~~~~~l~~G~~~~Ipa~~~---~~i~~~~~~~~~~a~ 433 (442)
.....+++|++|+.++..+ ++...|.+||++++-.... +++...+.+.++...
T Consensus 138 ~~~~~~v~~l~G~~~v~~~~~~~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~ 194 (200)
T 1yll_A 138 TASTLLLFAQQDGVAISLQGQPRGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVE 194 (200)
T ss_dssp CCSEEEEEESSSCEEEEETTEEEEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEccCcEEEEcCCCceeecCCCCEEEEeCCCccceeEeccCCceEEEEEE
Confidence 3567788999999999654 5689999999999987754 355544455555443
No 189
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=65.82 E-value=3.1 Score=43.62 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=24.8
Q ss_pred eeECCCCCEEEecCCCceeeecCcE-EEEeec
Q 013464 281 YVKLNPGQALYLGANEPHAYISGEC-IECMAT 311 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~G~~-vEim~~ 311 (442)
...|++||+++||+|.+|+...|+= +|+..-
T Consensus 440 ~~~L~~GDV~v~P~G~~H~~~ag~e~l~flaF 471 (531)
T 3fz3_A 440 DQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAF 471 (531)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEEEEE
T ss_pred EEEecCCeEEEECCCCeEEEecCCCCEEEEEE
Confidence 3579999999999999999877643 666554
No 190
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=65.51 E-value=2.6 Score=43.24 Aligned_cols=23 Identities=26% Similarity=0.385 Sum_probs=19.8
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
..+.|+|||++|||+|..|.--.
T Consensus 199 ~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 199 HEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEEECTTCEEEECTTCEEEEEC
T ss_pred eEEEECCCcEEEECCCceEEEEe
Confidence 45789999999999999999643
No 191
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=64.84 E-value=2.5 Score=42.66 Aligned_cols=22 Identities=18% Similarity=0.194 Sum_probs=20.0
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
-.+.++|||.+|||+|-.|+..
T Consensus 244 ~ev~l~pGEtlfIPsGWwH~V~ 265 (392)
T 3pua_A 244 YKCIVKQGQTLFIPSGWIYATL 265 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEECCCcEEeeCCCceEEEe
Confidence 4789999999999999999965
No 192
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=63.47 E-value=3.5 Score=40.72 Aligned_cols=23 Identities=13% Similarity=0.268 Sum_probs=19.8
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
-.+.++|||++|||+|-.|+...
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~ 278 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLN 278 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEE
T ss_pred EEEEECCCCEEEeCCCCcEEEec
Confidence 35679999999999999999654
No 193
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=63.45 E-value=3.3 Score=40.77 Aligned_cols=23 Identities=30% Similarity=0.309 Sum_probs=20.2
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
-.+.|+|||++|||+|-.|....
T Consensus 240 ~~~~L~pGD~LyiP~gWwH~v~~ 262 (338)
T 3al5_A 240 YECSLEAGDVLFIPALWFHNVIS 262 (338)
T ss_dssp EEEEECTTCEEEECTTCEEEEEE
T ss_pred EEEEECCCCEEEECCCCeEEEee
Confidence 46789999999999999999654
No 194
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=62.39 E-value=29 Score=33.11 Aligned_cols=68 Identities=26% Similarity=0.311 Sum_probs=46.9
Q ss_pred ceEEEEEEeCCCCeeeccC-CCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcC-C----CcEEEEecCcEEEEE
Q 013464 362 EFEVDCCILPKGTSSVFPA-VSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPA-N----TEINITTSSKLQLYR 431 (442)
Q Consensus 362 ~F~l~~i~~~~~~~~~~~~-~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa-~----~~~~i~~~~~~~~~~ 431 (442)
.-.+..++++++.++.+.. .+.-..+.|++|+++|.. ....+..|+.+++.. + ..+++++..+.+++.
T Consensus 166 ~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~g--~~~~l~~~d~~~~~~~~~~~~~~l~l~a~~~a~~Ll 239 (277)
T 2p17_A 166 PVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFGA--DNIEGKAGQALFFSRHNRGEETELNVTAREKLRLLL 239 (277)
T ss_dssp CEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEETT--TTEEEETTEEEEECCCCTTCEEEEEEEESSSEEEEE
T ss_pred CCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEECC--CceEeCCCcEEEEcCCCCCccceEEEEeCCCcEEEE
Confidence 4556667888777665442 234578889999988842 134799999999986 5 458888755565554
No 195
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=61.96 E-value=3.2 Score=43.13 Aligned_cols=24 Identities=25% Similarity=0.250 Sum_probs=20.6
Q ss_pred eeeECCCCCEEEecCCCceeeecC
Q 013464 280 NYVKLNPGQALYLGANEPHAYISG 303 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~G 303 (442)
-.+.|+|||.+|||+|..|.-.+-
T Consensus 228 ~e~~L~pGDvLYiP~g~~H~~~s~ 251 (489)
T 4diq_A 228 LQTVLEPGDLLYFPRGFIHQAECQ 251 (489)
T ss_dssp EEEEECTTCEEEECTTCEEEEEBC
T ss_pred eEEEECCCCEEEECCCCceEEEec
Confidence 358899999999999999986553
No 196
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=61.49 E-value=97 Score=28.23 Aligned_cols=83 Identities=7% Similarity=-0.033 Sum_probs=57.1
Q ss_pred EEEECCCCCceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEe-----CC------cEEEeCcccEEEEcCCCc--E
Q 013464 353 ITRYLPPFDEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLT-----AS------HNDAVAEGDVLFAPANTE--I 419 (442)
Q Consensus 353 ~~~y~~p~~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~-----~~------~~~~l~~G~~~~Ipa~~~--~ 419 (442)
..+|..|...|+|..+.-.+|..-.+-.+.+.+++.|++|+.+.+. ++ .+..+..|+++.+++..+ -
T Consensus 63 ~lL~~dp~~~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH 142 (211)
T 3uss_A 63 YLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVH 142 (211)
T ss_dssp EEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCE
T ss_pred EEEecCCCCCEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEE
Confidence 4577666778999999988776544444557899999999987742 12 247899999999998843 5
Q ss_pred EEEe---cCcEEEEEEEcC
Q 013464 420 NITT---SSKLQLYRAGVN 435 (442)
Q Consensus 420 ~i~~---~~~~~~~~a~~~ 435 (442)
++.+ +....-+-+|.+
T Consensus 143 ~V~N~~~d~~avSLHvYg~ 161 (211)
T 3uss_A 143 QVSNAFSDRTSISIHVYGA 161 (211)
T ss_dssp EEEESCSSSCEEEEEEESS
T ss_pred EEccCCCCCCEEEEEEcCC
Confidence 5554 223444445543
No 197
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=61.04 E-value=3.8 Score=40.51 Aligned_cols=23 Identities=26% Similarity=0.251 Sum_probs=20.2
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
-.+.|+|||++|||+|-.|....
T Consensus 261 ~~~~l~pGD~LyiP~gWwH~V~~ 283 (349)
T 3d8c_A 261 YETVVGPGDVLYIPMYWWHHIES 283 (349)
T ss_dssp EEEEECTTCEEEECTTCEEEEEE
T ss_pred EEEEECCCCEEEECCCCcEEEEE
Confidence 46889999999999999998654
No 198
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=59.31 E-value=43 Score=32.11 Aligned_cols=69 Identities=7% Similarity=0.027 Sum_probs=44.8
Q ss_pred eEEEEEEeCCCCeeeccCC-CCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe--cCcEEEEE
Q 013464 363 FEVDCCILPKGTSSVFPAV-SGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT--SSKLQLYR 431 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~-~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~--~~~~~~~~ 431 (442)
-.+..++++++.++.+... +.-..+.|++|++++........+..+..++..++..+++++ +.+.+++.
T Consensus 169 ~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LL 240 (290)
T 1j1l_A 169 TLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVL 240 (290)
T ss_dssp EEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEESCTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEE
T ss_pred cEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEECCcccceeccCceEEEecCCCEEEEEEcCCCCcEEEE
Confidence 4566677887776654422 346778899999999543222567777777877777777773 33454443
No 199
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=58.61 E-value=5.5 Score=39.93 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=20.5
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
-.+.++|||.+|||+|-.|+...
T Consensus 217 ~ev~l~pGEtLfIPsGWwH~V~n 239 (371)
T 3k3o_A 217 YKCSVKQGQTLFIPTGWIHAVLT 239 (371)
T ss_dssp EEEEEETTCEEEECTTCEEEEEE
T ss_pred EEEEECCCcEEEeCCCCeEEEec
Confidence 57899999999999999999654
No 200
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=57.90 E-value=3.9 Score=42.51 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=20.2
Q ss_pred ceeeECCCCCEEEecCCCceeee
Q 013464 279 FNYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 279 Ln~v~l~pGd~i~ipaGt~HAy~ 301 (442)
.-.+.++|||++|||+|-.|+..
T Consensus 335 ~~~~~l~pGe~lfIPsGWwH~V~ 357 (488)
T 3kv5_D 335 CYKCVVKQGHTLFVPTGWIHAVL 357 (488)
T ss_dssp CEEEEEETTCEEEECTTCEEEEE
T ss_pred eEEEeeCCCCEEEeCCCceEEee
Confidence 34678999999999999999964
No 201
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=57.45 E-value=4.5 Score=40.91 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=19.7
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
-.+.++|||++|||+|-.|+..
T Consensus 245 ~~v~l~pGe~lfIPsGW~H~V~ 266 (397)
T 3kv9_A 245 YKCVVKQGHTLFVPTGWIHAVL 266 (397)
T ss_dssp EEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEECCCCEEEeCCCCeEEcc
Confidence 4578999999999999999965
No 202
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=56.86 E-value=23 Score=28.20 Aligned_cols=34 Identities=26% Similarity=0.587 Sum_probs=25.3
Q ss_pred EEeCcccEEEEcCCCcEEEEecCcEEEEEEEcCC
Q 013464 403 DAVAEGDVLFAPANTEINITTSSKLQLYRAGVNS 436 (442)
Q Consensus 403 ~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~~~ 436 (442)
-.|++||.++||++..+...++.++.++.-.+..
T Consensus 8 ~~l~~G~v~vVPq~~~v~~~A~~~le~v~F~tna 41 (93)
T 1dgw_Y 8 ATLSEGDIIVIPSSFPVALKAASDLNMVGIGVNA 41 (93)
T ss_dssp EEECTTCEEEECTTCCEEEEESSSEEEEEEEESC
T ss_pred ceecCCcEEEECCCCceeEEecCCeEEEEEEecC
Confidence 5799999999999999666665566654443444
No 203
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=55.97 E-value=22 Score=32.83 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=44.5
Q ss_pred eEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEecCcEEEEEE
Q 013464 363 FEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITTSSKLQLYRA 432 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a 432 (442)
..+..+++.+|..+..-.+.+....+|++|+.+- + ...+.+|+.+.+|++..-......++.+|..
T Consensus 43 ~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~d--~--~~~~~~Gd~~~~P~g~~H~p~a~~gc~~~vk 108 (223)
T 3o14_A 43 RATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--E--HGDYPAGTYVRNPPTTSHVPGSAEGCTIFVK 108 (223)
T ss_dssp EEEEEEEECTTEECCCEECTTCEEEEEEEEEEEE--T--TEEEETTEEEEECTTCEECCEESSCEEEEEE
T ss_pred cEEEEEEECCCCCcccccCCCCEEEEEEEeEEEE--C--CeEECCCeEEEeCCCCccccEeCCCCEEEEE
Confidence 3455677777765433334578889999998652 2 3689999999999998633333445666554
No 204
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=55.10 E-value=7 Score=33.39 Aligned_cols=19 Identities=21% Similarity=-0.055 Sum_probs=17.2
Q ss_pred eeECCCCCEEEecCCCcee
Q 013464 281 YVKLNPGQALYLGANEPHA 299 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HA 299 (442)
-..+++||.+++|+|..|+
T Consensus 85 ~~~~~~Gd~~~~p~g~~H~ 103 (145)
T 2o1q_A 85 GDTAIAPGYGYESANARHD 103 (145)
T ss_dssp SEEEESSEEEEECTTCEES
T ss_pred ceEeCCCEEEEECcCCccC
Confidence 3568999999999999999
No 205
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=54.28 E-value=14 Score=35.86 Aligned_cols=42 Identities=24% Similarity=0.325 Sum_probs=33.7
Q ss_pred CCeEEEEEEcCcEEE----EeCCcEEEeCc-c---cEEEEcCCCcEEEEe
Q 013464 382 SGPSIFLVTDGEGSM----LTASHNDAVAE-G---DVLFAPANTEINITT 423 (442)
Q Consensus 382 ~~~~il~v~~G~~~i----~~~~~~~~l~~-G---~~~~Ipa~~~~~i~~ 423 (442)
.....++|++|++.+ ...++...+.. | +.++||++..-.+.+
T Consensus 292 ~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n 341 (369)
T 3st7_A 292 TKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIEN 341 (369)
T ss_dssp SCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEE
T ss_pred CcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEE
Confidence 467899999999999 34567777777 7 899999998755555
No 206
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=54.15 E-value=7.5 Score=39.93 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=19.7
Q ss_pred eeeECCCCCEEEecCCCceeee
Q 013464 280 NYVKLNPGQALYLGANEPHAYI 301 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~ 301 (442)
-.+.++|||.+|||+|-.|+..
T Consensus 301 ~~v~l~pGetlfIPsGWwH~V~ 322 (447)
T 3kv4_A 301 YKCSVKQGQTLFIPTGWIHAVL 322 (447)
T ss_dssp EEEEEETTCEEEECTTCEEEEE
T ss_pred EEEEECCCcEEecCCCCeEEEe
Confidence 4678999999999999999954
No 207
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=53.96 E-value=45 Score=27.81 Aligned_cols=54 Identities=17% Similarity=0.041 Sum_probs=42.9
Q ss_pred CCCeEEEEEEcCcEEEEe-C-------CcEEEeCcccEEEEcCCCcEEEEecCcEEEEEEEc
Q 013464 381 VSGPSIFLVTDGEGSMLT-A-------SHNDAVAEGDVLFAPANTEINITTSSKLQLYRAGV 434 (442)
Q Consensus 381 ~~~~~il~v~~G~~~i~~-~-------~~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~~~a~~ 434 (442)
.+.+..+.|++|+.+... . .+...+..|+..+||+..-.+|..++++++.+.|.
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~leFy 97 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFNINFW 97 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEEEEEE
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEEEEEE
Confidence 356889999999999973 1 23578889999999999987776778888877664
No 208
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=52.22 E-value=10 Score=38.91 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=20.3
Q ss_pred eeeECCCCCEEEecCCCceeeec
Q 013464 280 NYVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
-.+.++|||++|||+|-.|+...
T Consensus 266 ~~v~l~pGE~LfIPsGWwH~V~n 288 (451)
T 2yu1_A 266 QRIELKQGYTFVIPSGWIHAVYT 288 (451)
T ss_dssp EEEEECTTCEEEECTTCEEEEEC
T ss_pred eEEEECCCcEEEeCCCceEEEec
Confidence 36789999999999999999764
No 209
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=50.55 E-value=15 Score=29.39 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=30.9
Q ss_pred eECCCCCEEEecCCCceeeecCcEEEEeec--CC-ceEEcCCCC
Q 013464 282 VKLNPGQALYLGANEPHAYISGECIECMAT--SD-NVVRAGLTP 322 (442)
Q Consensus 282 v~l~pGd~i~ipaGt~HAy~~G~~vEim~~--SD-nt~R~glt~ 322 (442)
-.|++||.+.||+|-+=+..++.-+|+..- +| |-.|.-|.|
T Consensus 8 ~~l~~G~v~vVPq~~~v~~~A~~~le~v~F~tna~~~~~~~LAG 51 (93)
T 1dgw_Y 8 ATLSEGDIIVIPSSFPVALKAASDLNMVGIGVNAENNERNFLAG 51 (93)
T ss_dssp EEECTTCEEEECTTCCEEEEESSSEEEEEEEESCTTCCEEESSS
T ss_pred ceecCCcEEEECCCCceeEEecCCeEEEEEEecCCCCeeeeccC
Confidence 368999999999999999988766665543 55 666754544
No 210
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=47.70 E-value=8.6 Score=35.73 Aligned_cols=22 Identities=14% Similarity=0.206 Sum_probs=19.9
Q ss_pred eeECCCCCEEEecCCCceeeec
Q 013464 281 YVKLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HAy~~ 302 (442)
.++++|||.++||+|.+|.+..
T Consensus 50 ~~~l~~g~l~~i~p~~~h~~~~ 71 (276)
T 3gbg_A 50 SYEINSSSIILLKKNSIQRFSL 71 (276)
T ss_dssp EEEECTTEEEEECTTCEEEEEE
T ss_pred eEEEcCCCEEEEcCCCceeecc
Confidence 7789999999999999999753
No 211
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=40.50 E-value=85 Score=29.86 Aligned_cols=66 Identities=11% Similarity=0.091 Sum_probs=43.8
Q ss_pred eEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCc---EEEEecCcEEEEEE
Q 013464 363 FEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTE---INITTSSKLQLYRA 432 (442)
Q Consensus 363 F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~---~~i~~~~~~~~~~a 432 (442)
=+..++.++.+...--.-.....-++|++|+..+-. ..+.++.-.|+||+.. .++.+....+++.-
T Consensus 91 aSTl~V~fpp~~~~P~Gi~~ad~E~fVL~G~i~~G~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL~f 159 (303)
T 2qdr_A 91 ASTSRVVLPPKFEAPSGIFTADLEIFVIKGAIQLGE----WQLNKHSYSFIPAGVRIGSWKVLGGEEAEILWM 159 (303)
T ss_dssp CEEEEEEECTTCEECCBEESSCEEEEEEESEEEETT----EEECTTEEEEECTTCCBCCEEEETTSCEEEEEE
T ss_pred cceEEEEecCCCCCCCcccccceEEEEEEeEEEeCC----EEecCCceEEecCCCccCceeecCCCCcEEEEE
Confidence 355566666654321000133555899999988843 7899999999999984 66655556666554
No 212
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=40.45 E-value=1.2e+02 Score=27.30 Aligned_cols=47 Identities=15% Similarity=0.256 Sum_probs=36.2
Q ss_pred CCCeEEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCc-EEEEecCcEEEEE
Q 013464 381 VSGPSIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTE-INITTSSKLQLYR 431 (442)
Q Consensus 381 ~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~-~~i~~~~~~~~~~ 431 (442)
.....+++|++|+.++.. ..|.+||+++|-.... ..+.+.+.+.++.
T Consensus 141 ~a~~~lv~~~~G~~~v~~----~~L~~~D~L~~~~~~~~~~~~~~~~~~~ie 188 (193)
T 3esg_A 141 TAQTVLVFSVADEVKVLG----EKLGHHDCLQVDGNAGLLDISVTGRCCLIE 188 (193)
T ss_dssp CCSEEEEEECSSCEEETT----EEECTTCEEEECSCCSCEEEEEESSEEEEE
T ss_pred CCCEEEEEEeeCCEEEEE----EecCCCCEEEEeCCcceEEEecceEEEEEE
Confidence 345668899999999864 7999999999998776 7777655555443
No 213
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=39.29 E-value=12 Score=31.18 Aligned_cols=19 Identities=26% Similarity=0.499 Sum_probs=16.0
Q ss_pred eeECCCCCEEEecCCCcee
Q 013464 281 YVKLNPGQALYLGANEPHA 299 (442)
Q Consensus 281 ~v~l~pGd~i~ipaGt~HA 299 (442)
.+.+++||++++|+|.-..
T Consensus 81 ~~~l~aGD~~~~P~G~~gt 99 (116)
T 3es4_A 81 PVKIGPGSIVSIAKGVPSR 99 (116)
T ss_dssp CEEECTTEEEEECTTCCEE
T ss_pred EEEECCCCEEEECCCCeEE
Confidence 4679999999999998644
No 214
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=35.82 E-value=65 Score=27.92 Aligned_cols=58 Identities=14% Similarity=0.124 Sum_probs=41.3
Q ss_pred CceEEEEEEeCCCCeeeccCCCCeEEEEEEcCcEEEEeCC--cEEEeCcccEEEEcCCCc
Q 013464 361 DEFEVDCCILPKGTSSVFPAVSGPSIFLVTDGEGSMLTAS--HNDAVAEGDVLFAPANTE 418 (442)
Q Consensus 361 ~~F~l~~i~~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~--~~~~l~~G~~~~Ipa~~~ 418 (442)
.--.+.++++.+|..+..-.+.+...++||+|......+. ....+..|+-++-|++..
T Consensus 44 ~g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~~~~aGsYv~ePpGs~ 103 (153)
T 3bal_A 44 TSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRGGEQEGGSTAYAPSYGFESSGAL 103 (153)
T ss_dssp TTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETTCGGGTSEEEESSEEEEECTTCE
T ss_pred cceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEecCccccCccccCCCeEEEcCCCCc
Confidence 3344557788777654322345788899999988775433 246788999999999986
No 215
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=34.61 E-value=20 Score=32.18 Aligned_cols=20 Identities=10% Similarity=0.212 Sum_probs=18.1
Q ss_pred ECCCCCEEEecCCCceeeec
Q 013464 283 KLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 283 ~l~pGd~i~ipaGt~HAy~~ 302 (442)
.+.+||.+++|+|..|....
T Consensus 162 ~~~~Gd~~~~p~g~~H~p~a 181 (195)
T 2q1z_B 162 RFGAGDIEIADQELEHTPVA 181 (195)
T ss_dssp EEETTCEEEECSSCCCCCEE
T ss_pred EECCCeEEEeCcCCccCCEe
Confidence 47899999999999998776
No 216
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=33.35 E-value=1.1e+02 Score=24.21 Aligned_cols=51 Identities=16% Similarity=0.237 Sum_probs=31.7
Q ss_pred CCeEEEEEEcCcEEEEeCCc-EEEeCcccEEE----EcCCC-cEEEEecCcEEEEEE
Q 013464 382 SGPSIFLVTDGEGSMLTASH-NDAVAEGDVLF----APANT-EINITTSSKLQLYRA 432 (442)
Q Consensus 382 ~~~~il~v~~G~~~i~~~~~-~~~l~~G~~~~----Ipa~~-~~~i~~~~~~~~~~a 432 (442)
..-.++++++|.+.+..++. ...+.+|+.|= +.... ..++...++.+++..
T Consensus 63 ~~~~~y~i~~G~v~~~~~g~~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i 119 (139)
T 3ocp_A 63 VGSLVYVMEDGKVEVTKEGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAI 119 (139)
T ss_dssp CCCEEEEEEECCEEEEETTEEEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEEEE
T ss_pred cCCEEEEEEeCEEEEEECCEEEEEeCCCCEeccHHHHCCCCcceEEEECcceEEEEE
Confidence 35678999999999976654 34577787652 11111 255555456666553
No 217
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=32.84 E-value=40 Score=28.90 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=25.2
Q ss_pred eeeECCCCCEEEecCCCceeee-cCcE-EEEeecC
Q 013464 280 NYVKLNPGQALYLGANEPHAYI-SGEC-IECMATS 312 (442)
Q Consensus 280 n~v~l~pGd~i~ipaGt~HAy~-~G~~-vEim~~S 312 (442)
..+.++||+.+.||.|+=|--. .+.+ +=+.+++
T Consensus 76 ~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 76 ELTLMEKGKVYNVPAECWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp EEEECCTTCCEEECTTCEEEEEECTTCEEEEEEES
T ss_pred ceEEecCCCEEEeCCCccCcccCCCceEEEEEEeC
Confidence 4689999999999999999644 4555 5455555
No 218
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=30.61 E-value=2.9e+02 Score=24.62 Aligned_cols=69 Identities=7% Similarity=0.041 Sum_probs=46.9
Q ss_pred EEECCCCCceEEEEEEeCCCCeeeccCCC-CeEEEEEEcCcEEEEe-C---C--------cEEEeCcccEEEEcCCCc-E
Q 013464 354 TRYLPPFDEFEVDCCILPKGTSSVFPAVS-GPSIFLVTDGEGSMLT-A---S--------HNDAVAEGDVLFAPANTE-I 419 (442)
Q Consensus 354 ~~y~~p~~~F~l~~i~~~~~~~~~~~~~~-~~~il~v~~G~~~i~~-~---~--------~~~~l~~G~~~~Ipa~~~-~ 419 (442)
.++. +...|+|..+.-.+|..-.+-.+. +.+++.|++|+.+-.. . + .+..+..|++.+++...+ -
T Consensus 62 ll~~-~~~~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH 140 (200)
T 3eln_A 62 LVDQ-GNGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLH 140 (200)
T ss_dssp EEEC-GGGTCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEE
T ss_pred eeec-CCCceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEE
Confidence 3454 346799999988877543333444 5889999999988752 1 1 257899999999954444 4
Q ss_pred EEEe
Q 013464 420 NITT 423 (442)
Q Consensus 420 ~i~~ 423 (442)
++.+
T Consensus 141 ~V~N 144 (200)
T 3eln_A 141 RVEN 144 (200)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 4444
No 219
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=30.44 E-value=83 Score=24.88 Aligned_cols=62 Identities=16% Similarity=0.294 Sum_probs=35.6
Q ss_pred eCCCCeeeccCCCCeEEEEEEcCcEEEEeCCcEEEeCcccEEE----EcCCC-cEEEEecCcEEEEEE
Q 013464 370 LPKGTSSVFPAVSGPSIFLVTDGEGSMLTASHNDAVAEGDVLF----APANT-EINITTSSKLQLYRA 432 (442)
Q Consensus 370 ~~~~~~~~~~~~~~~~il~v~~G~~~i~~~~~~~~l~~G~~~~----Ipa~~-~~~i~~~~~~~~~~a 432 (442)
+++|+.+.......-.++++++|.+.+...+ ...+.+|+.+= +.... ..++....+.+++..
T Consensus 39 ~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i 105 (138)
T 1vp6_A 39 VPAGAVICRIGEPGDRMFFVVEGSVSVATPN-PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSL 105 (138)
T ss_dssp ECTTCEEECTTSCCCEEEEEEESCEEECSSS-CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEE
T ss_pred eCCCCEEEeCCCCcceEEEEEeeEEEEEeCC-cceECCCCEeeehHhccCCCceeEEEECCCEEEEEE
Confidence 3445443222223467999999999996544 46788888752 12211 244554456666653
No 220
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=30.31 E-value=1.3e+02 Score=24.43 Aligned_cols=51 Identities=14% Similarity=0.348 Sum_probs=31.6
Q ss_pred CCeEEEEEEcCcEEEEeCCc-EEEeCcccEEEE----cCCC-cEEEEecCcEEEEEE
Q 013464 382 SGPSIFLVTDGEGSMLTASH-NDAVAEGDVLFA----PANT-EINITTSSKLQLYRA 432 (442)
Q Consensus 382 ~~~~il~v~~G~~~i~~~~~-~~~l~~G~~~~I----pa~~-~~~i~~~~~~~~~~a 432 (442)
..-.+++|++|.+.+..++. ...+.+|+.|=- .... ..++....+.+++..
T Consensus 78 ~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i 134 (154)
T 3pna_A 78 EGDNFYVIDQGEMDVYVNNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGI 134 (154)
T ss_dssp CCCEEEEEEESCEEEEETTEEEEEECTTCEECCHHHHHCCCCSSEEEESSCEEEEEE
T ss_pred CCCeEEEEEecEEEEEECCEEEEEecCCCEeeehHhhcCCCcceEEEECcceEEEEE
Confidence 35679999999999987654 345778876521 1111 245555455565543
No 221
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=28.84 E-value=14 Score=37.52 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=37.8
Q ss_pred HHHhhCCCCcccchhhcceeeECCCCCEEEecCCCceeeecCcE
Q 013464 262 RLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGEC 305 (442)
Q Consensus 262 ~l~~~yp~D~G~~~~~~Ln~v~l~pGd~i~ipaGt~HAy~~G~~ 305 (442)
-|...|+||+|.++...-+.-.+++||.|.|.-+..|.-..+++
T Consensus 293 ~l~a~~kG~~~~~~~g~~~~~~~~~gd~v~~~e~c~h~~~~~di 336 (423)
T 3qq5_A 293 IVESRYRGDLAYFVESVRKIEELEDGDTVVIMEGCTHRPLTEDI 336 (423)
T ss_dssp HHHHHHSSCSHHHHHHHHTTTTCCTTCEEEEECCSCCCCSSCCT
T ss_pred HHhhccCCCHHHHHHHHHHHHhCCCCCEEEEeccCCCCCccccc
Confidence 46667889999999988888899999999999999999765543
No 222
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=28.69 E-value=3.1e+02 Score=26.96 Aligned_cols=69 Identities=4% Similarity=-0.008 Sum_probs=45.2
Q ss_pred CCceEEEEEEeCCCC-eeeccCCCCeEEEEEEcCcEEEEeCC----cEEEeCcccEEEEcCCCcEEEEecCcEEE
Q 013464 360 FDEFEVDCCILPKGT-SSVFPAVSGPSIFLVTDGEGSMLTAS----HNDAVAEGDVLFAPANTEINITTSSKLQL 429 (442)
Q Consensus 360 ~~~F~l~~i~~~~~~-~~~~~~~~~~~il~v~~G~~~i~~~~----~~~~l~~G~~~~Ipa~~~~~i~~~~~~~~ 429 (442)
+++-.-..++|+++. ...+. ..+-.=++|++|..+|.+++ .+..|.++++.+|.+-..-.+++++.+..
T Consensus 331 lPdl~g~~l~Vd~~d~~~DL~-d~ge~hY~v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H~w~G~GtVlk 404 (443)
T 3g7d_A 331 LPDLVGSFLRVDADGRGADLI-DHAENHYVVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWHGTGTVLK 404 (443)
T ss_dssp CTTCEEEEEEEC------CBC-CSSEEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEESSEEEEE
T ss_pred CCCceeEEEEecCCCcchhhh-hcccceEEEecCceEEEecCCCCccceEECCCCceeecccccccccCCceEEE
Confidence 566666677776532 11222 13445566999999998752 26789999999999998877876443333
No 223
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=25.76 E-value=1e+02 Score=26.60 Aligned_cols=50 Identities=16% Similarity=0.342 Sum_probs=32.0
Q ss_pred CeEEEEEEcCcEEEEe-CCcEEEeCcccEEE----EcCCC-cEEEEecCcEEEEEE
Q 013464 383 GPSIFLVTDGEGSMLT-ASHNDAVAEGDVLF----APANT-EINITTSSKLQLYRA 432 (442)
Q Consensus 383 ~~~il~v~~G~~~i~~-~~~~~~l~~G~~~~----Ipa~~-~~~i~~~~~~~~~~a 432 (442)
.-.++++++|.+.+.. ++....+.+|+.|= +.... ..++.+.+..+++..
T Consensus 113 ~~~ly~I~~G~v~v~~~~g~~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i 168 (202)
T 3bpz_A 113 GKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSL 168 (202)
T ss_dssp CCEEEEEEECEEEEECTTSCCEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEeccEEEEEECCCeEEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEE
Confidence 3578999999999865 34566788888762 22221 255555556666653
No 224
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=25.67 E-value=21 Score=31.32 Aligned_cols=20 Identities=25% Similarity=0.333 Sum_probs=17.8
Q ss_pred ECCCCCEEEecCCCceeeec
Q 013464 283 KLNPGQALYLGANEPHAYIS 302 (442)
Q Consensus 283 ~l~pGd~i~ipaGt~HAy~~ 302 (442)
.+++||.+++|+|..|....
T Consensus 83 ~~~aGd~~~~P~g~~H~~~a 102 (165)
T 3cjx_A 83 KQTAGCYLYEPGGSIHQFNT 102 (165)
T ss_dssp CEETTEEEEECTTCEECEEC
T ss_pred EECCCeEEEeCCCCceeeEe
Confidence 36899999999999999765
No 225
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=24.56 E-value=1.2e+02 Score=23.92 Aligned_cols=29 Identities=10% Similarity=0.208 Sum_probs=22.4
Q ss_pred CeEEEEEEcCcEEEEe-CCcEEEeCcccEE
Q 013464 383 GPSIFLVTDGEGSMLT-ASHNDAVAEGDVL 411 (442)
Q Consensus 383 ~~~il~v~~G~~~i~~-~~~~~~l~~G~~~ 411 (442)
.-.++++++|.+.+.. ++....+.+|+.|
T Consensus 58 ~~~~y~i~~G~v~~~~~~g~~~~l~~G~~f 87 (134)
T 2d93_A 58 LDSWYVILNGTVEISHPDGKVENLFMGNSF 87 (134)
T ss_dssp ECEEEECCBSCEEEECSSSCEEEECTTCEE
T ss_pred CCeEEEEEeCEEEEEcCCCcEEEecCCCcc
Confidence 3568999999999975 3455778899866
No 226
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=24.23 E-value=2.5e+02 Score=26.22 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=33.1
Q ss_pred EEEEEEcCcEEEEeCCcEEEeCcccEEEEcCCCcEEEEe
Q 013464 385 SIFLVTDGEGSMLTASHNDAVAEGDVLFAPANTEINITT 423 (442)
Q Consensus 385 ~il~v~~G~~~i~~~~~~~~l~~G~~~~Ipa~~~~~i~~ 423 (442)
.+.++++|.-.....+..+.|++|+++-|++++--.+.+
T Consensus 156 ~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~a 194 (246)
T 3kmh_A 156 DITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWA 194 (246)
T ss_dssp CEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEE
T ss_pred CeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEe
Confidence 567788998877777889999999999999998766655
No 227
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=23.97 E-value=1.5e+02 Score=23.81 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=32.9
Q ss_pred CCeEEEEEEcCcEEEEeCCc-EEEeCcccEEEEcC-------CCcEEEEecCcEEEEEE
Q 013464 382 SGPSIFLVTDGEGSMLTASH-NDAVAEGDVLFAPA-------NTEINITTSSKLQLYRA 432 (442)
Q Consensus 382 ~~~~il~v~~G~~~i~~~~~-~~~l~~G~~~~Ipa-------~~~~~i~~~~~~~~~~a 432 (442)
..-.+++|++|.+.+...+. ...+.+|+.+=-.+ ....+++..++.+++..
T Consensus 67 ~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i 125 (160)
T 4f8a_A 67 SVDSLCFVVSGSLEVIQDDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVI 125 (160)
T ss_dssp BCCEEEEEEESEEEEEETTEEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEE
T ss_pred CccEEEEEEeeEEEEEECCEEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEE
Confidence 35689999999999976544 45678888775322 11255555556666653
No 228
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=23.97 E-value=39 Score=29.32 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=18.2
Q ss_pred ECCCCCEEEecCCCceeeecC
Q 013464 283 KLNPGQALYLGANEPHAYISG 303 (442)
Q Consensus 283 ~l~pGd~i~ipaGt~HAy~~G 303 (442)
.+++||.++.|+|..|....+
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~ 101 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSA 101 (159)
T ss_dssp CBCTTCEEEECSSEEECEEES
T ss_pred EECCCeEEEECCCCcceeEeC
Confidence 489999999999999987554
No 229
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=22.70 E-value=3.3e+02 Score=22.89 Aligned_cols=51 Identities=8% Similarity=0.089 Sum_probs=33.8
Q ss_pred CCeEEEEEEcCcEEEEeC-C---cEEEeCccc-EEEEcCCCcEEEEe--cCcEEEEEE
Q 013464 382 SGPSIFLVTDGEGSMLTA-S---HNDAVAEGD-VLFAPANTEINITT--SSKLQLYRA 432 (442)
Q Consensus 382 ~~~~il~v~~G~~~i~~~-~---~~~~l~~G~-~~~Ipa~~~~~i~~--~~~~~~~~a 432 (442)
.....++|+.|+.++... + +++.|.+.. .+.||++.--.+.+ ++.+.+..|
T Consensus 55 ~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~avllvla 112 (141)
T 2pa7_A 55 KLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSDCVMMVLA 112 (141)
T ss_dssp SCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTTCEEEEEE
T ss_pred CceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCCeEEEEEC
Confidence 356899999999998643 2 256666554 48899999766654 333444433
No 230
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=22.23 E-value=2.6e+02 Score=23.71 Aligned_cols=50 Identities=10% Similarity=0.325 Sum_probs=30.8
Q ss_pred CeEEEEEEcCcEEEEeC-Cc-EEEeCcccEE----EEcCCC-cEEEEecCcEEEEEE
Q 013464 383 GPSIFLVTDGEGSMLTA-SH-NDAVAEGDVL----FAPANT-EINITTSSKLQLYRA 432 (442)
Q Consensus 383 ~~~il~v~~G~~~i~~~-~~-~~~l~~G~~~----~Ipa~~-~~~i~~~~~~~~~~a 432 (442)
.-.++++++|.+.+... |. ...+.+|+.| ++.... ..++.+.+..+++..
T Consensus 112 ~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i 168 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSL 168 (198)
T ss_dssp CSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEE
T ss_pred CcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEE
Confidence 34689999999998742 32 4568888876 222222 255555556666553
No 231
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=21.05 E-value=97 Score=31.00 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=24.4
Q ss_pred EEEeCcccEEEEcCCCcEEEEe-cCcEEEEEEEcC
Q 013464 402 NDAVAEGDVLFAPANTEINITT-SSKLQLYRAGVN 435 (442)
Q Consensus 402 ~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~~~ 435 (442)
++.-+.||++||||+....+.+ .....+..-|+.
T Consensus 294 ~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~s 328 (392)
T 2ypd_A 294 TLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVS 328 (392)
T ss_dssp EEEEETTCEEEECTTCEEEEEESSEEEEEEEEECC
T ss_pred EEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcC
Confidence 5667899999999999988877 334455444443
No 232
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=20.88 E-value=2.6e+02 Score=23.39 Aligned_cols=52 Identities=13% Similarity=0.034 Sum_probs=39.9
Q ss_pred CCeEEEEEEcCcEEEEe--C-C-----cEEEeCcccEEEEcCCCcEEEEe-cCcEEEEEEE
Q 013464 382 SGPSIFLVTDGEGSMLT--A-S-----HNDAVAEGDVLFAPANTEINITT-SSKLQLYRAG 433 (442)
Q Consensus 382 ~~~~il~v~~G~~~i~~--~-~-----~~~~l~~G~~~~Ipa~~~~~i~~-~~~~~~~~a~ 433 (442)
+.+..+.|++|+.+... + + +...+..|+..+||+..--+|+. ++++++.+-|
T Consensus 38 Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leF 98 (127)
T 3bb6_A 38 GVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDF 98 (127)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEE
T ss_pred CEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEE
Confidence 45789999999998762 1 2 35668899999999999877875 6688776654
No 233
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=20.44 E-value=4.3e+02 Score=23.08 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=23.9
Q ss_pred eCcccE--EEEcCCCcEEEEec-CcEEEEEEEcCCCc
Q 013464 405 VAEGDV--LFAPANTEINITTS-SKLQLYRAGVNSRF 438 (442)
Q Consensus 405 l~~G~~--~~Ipa~~~~~i~~~-~~~~~~~a~~~~~~ 438 (442)
+.+|+. ++||++.-...+.. ++..++-+.|..-|
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~VaPGF 137 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMNQDGFSLVGCMVSPGF 137 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEESSSSEEEEEEEESSCC
T ss_pred cccCceeEEEECCCCEEEEEECCCCcEEEEEEECCCc
Confidence 678999 99999996555442 56677777665544
Done!