Your job contains 1 sequence.
>013467
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVI
PTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIV
VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE
VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH
PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR
VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTML
ELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFR
QRIFGDHKEGGAGATPDTTSSA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013467
(442 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 1894 1.5e-195 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 1212 2.7e-123 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 1212 2.7e-123 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 1199 6.5e-122 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 1064 1.3e-107 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 1064 1.3e-107 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 1064 1.3e-107 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 1064 1.3e-107 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 1064 1.3e-107 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 1064 1.3e-107 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 1064 1.3e-107 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 1062 2.1e-107 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 1058 5.7e-107 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 1044 1.7e-105 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 1038 7.5e-105 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 1035 1.6e-104 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 988 1.5e-99 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 616 3.9e-60 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 528 8.3e-51 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 490 8.8e-47 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 490 8.8e-47 1
UNIPROTKB|C9JFU6 - symbol:UXS1 "UDP-glucuronic acid decar... 475 3.4e-45 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 423 1.1e-39 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 372 2.8e-34 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 362 3.2e-33 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 353 2.9e-32 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 352 3.7e-32 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 327 1.6e-29 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 306 2.8e-27 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 299 1.6e-26 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 293 8.7e-26 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 289 2.6e-25 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 288 3.4e-25 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 287 4.4e-25 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 306 5.6e-25 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 285 7.7e-25 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 303 1.4e-24 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 276 8.4e-24 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 296 1.0e-23 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 274 1.4e-23 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 274 1.4e-23 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 273 1.8e-23 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 273 1.8e-23 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 269 5.3e-23 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 268 6.9e-23 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 267 9.0e-23 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 267 9.0e-23 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 266 1.2e-22 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 265 1.5e-22 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 259 7.1e-22 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 254 2.6e-21 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 262 3.0e-21 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 231 1.9e-20 2
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 245 2.6e-20 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 224 2.7e-20 2
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 261 1.2e-19 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 247 2.1e-19 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 226 6.1e-19 2
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 244 8.2e-19 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 246 8.9e-19 2
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 237 1.8e-18 1
UNIPROTKB|Q4KC82 - symbol:arnA "Bifunctional polymyxin re... 218 6.4e-18 2
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 199 8.0e-18 2
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 199 8.0e-18 2
UNIPROTKB|C9J3T9 - symbol:UXS1 "UDP-glucuronic acid decar... 222 9.3e-18 1
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 224 2.8e-17 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 225 5.7e-17 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 228 6.5e-17 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 226 6.7e-17 1
UNIPROTKB|P77398 - symbol:arnA "fused UDP-L-Ara4N formylt... 216 7.1e-17 2
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 226 1.1e-16 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 226 1.1e-16 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 223 1.2e-16 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 223 1.2e-16 1
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 216 1.9e-15 1
TAIR|locus:2200018 - symbol:AXS2 "UDP-D-apiose/UDP-D-xylo... 139 4.5e-15 2
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 212 5.4e-15 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 175 1.0e-14 2
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 175 1.0e-14 2
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 203 3.2e-14 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 140 3.3e-14 2
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 201 9.9e-14 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 199 2.1e-13 1
UNIPROTKB|Q83AP4 - symbol:CBU_1837 "UDP-glucose 4-epimera... 198 3.1e-13 1
TIGR_CMR|CBU_1837 - symbol:CBU_1837 "NAD-dependent epimer... 198 3.1e-13 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 197 3.9e-13 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 197 3.9e-13 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 194 1.1e-12 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 192 1.8e-12 1
UNIPROTKB|P71790 - symbol:gmdA "GDP-D-mannose dehydratase... 191 1.9e-12 1
TAIR|locus:2041974 - symbol:AXS1 "UDP-D-apiose/UDP-D-xylo... 143 2.6e-12 2
TIGR_CMR|GSU_0626 - symbol:GSU_0626 "GDP-mannose 4,6-dehy... 172 3.5e-12 2
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 189 3.8e-12 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 191 4.0e-12 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 187 4.0e-12 1
TIGR_CMR|CBU_0689 - symbol:CBU_0689 "GDP-mannose 4,6-dehy... 185 1.0e-11 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 184 1.5e-11 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 184 1.5e-11 1
UNIPROTKB|Q3ZBE9 - symbol:NSDHL "Sterol-4-alpha-carboxyla... 173 1.6e-11 2
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 182 2.0e-11 1
WARNING: Descriptions of 124 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 1894 (671.8 bits), Expect = 1.5e-195, P = 1.5e-195
Identities = 371/449 (82%), Positives = 393/449 (87%)
Query: 1 MGSELIYRGHDSQLAT-DSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
M SELI R H++ T D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct: 1 MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60
Query: 60 IPTSYPAS-YGGARGHVAISDSLSYYPVETYQRA----YNPRVGFGAVNSGGKIPLGLKR 114
P S ++ Y I SY P QR Y R+G +GGKIPLGLKR
Sbjct: 61 FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIGA----TGGKIPLGLKR 116
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFE+IRHDVV
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236
Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
GDPLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRM
Sbjct: 237 GDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 296
Query: 295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNP 354
CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNP
Sbjct: 297 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNP 356
Query: 355 GEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPK 414
GEFTMLELA+VVQETIDPNA IEFRPNTEDDPHKRKPDI++AKELLGWEPKVSLR+GLP
Sbjct: 357 GEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPL 416
Query: 415 MVKDFRQRIFGDHKEGG-AGATPDTTSSA 442
MVKDFRQR+FGD KEG A AT T+SA
Sbjct: 417 MVKDFRQRVFGDQKEGSSAAATTTKTTSA 445
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 227/311 (72%), Positives = 262/311 (84%)
Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
+ +RI+VTGGAGF+GSHLVD+L+ + VIV DN+FTG K+N+ G+P FELIRHD
Sbjct: 28 QSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 87
Query: 173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
V EPL +EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 88 VTEPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 147
Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL DYHR G+E+RIARIFNTYGP
Sbjct: 148 VYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 207
Query: 293 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLG 352
RM IDDGRVVSNF+AQALR E LTV G QTRSF +VSD+VEGLMRLMEG+ GP N+G
Sbjct: 208 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIG 267
Query: 353 NPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGL 412
NPGEFTM+ELA+ V+E I P+ +I+ NT DDP +RKPDIS+AKE+LGWEPKV LR+GL
Sbjct: 268 NPGEFTMVELAETVKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGL 327
Query: 413 PKMVKDFRQRI 423
P M +DFR R+
Sbjct: 328 PLMEEDFRLRL 338
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 227/316 (71%), Positives = 267/316 (84%)
Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
+ +RI+++GGAGF+GSHLVD+L+ + VIV DN+FTG K+N+ G+P FELIRHD
Sbjct: 26 QSNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 85
Query: 173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
V EPLL+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 86 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 145
Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL DYHR G+E+RIARIFNTYGP
Sbjct: 146 VYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 205
Query: 293 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLG 352
RM IDDGRVVSNF+AQALR E LTV G QTRSF +VSD+V+GLMRLMEG+ GP N+G
Sbjct: 206 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIG 265
Query: 353 NPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGL 412
NPGEFTM+ELA+ V+E I+P+ +I+ NT DDP +RKPDI++AKE+LGWEPKV LR+GL
Sbjct: 266 NPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGL 325
Query: 413 PKMVKDFRQRIFGDHK 428
P M +DFR R+ G HK
Sbjct: 326 PLMEEDFRLRL-GVHK 340
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
Identities = 223/308 (72%), Positives = 262/308 (85%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
+RI+++GGAGF+GSHLVD+L+ + V+V DN+FTG KEN+ G+P FELIRHDV E
Sbjct: 45 MRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTE 104
Query: 176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
PLL+EVD+IYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYG
Sbjct: 105 PLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 164
Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
DPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL DYHR G+E+RIARIFNTYGPRM
Sbjct: 165 DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 224
Query: 296 IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPG 355
IDDGRVVSNF+AQALR E LTV G QTRSF +VSD+V+GL+RLMEG GP N+GNPG
Sbjct: 225 IDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEGNDTGPINIGNPG 284
Query: 356 EFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKM 415
EFTM+ELA+ V+E I+P+ +I+ NT DDP +RKPDIS+AKE+LGWEPKV LR+GLP M
Sbjct: 285 EFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLM 344
Query: 416 VKDFRQRI 423
+DFR R+
Sbjct: 345 EEDFRLRL 352
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 200/306 (65%), Positives = 239/306 (78%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 91 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 150
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 151 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 210
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 211 EVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 270
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 271 DGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 330
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ++++ + ++I+F +DDP KRKPDI +AK LLGWEP V L +GL K +
Sbjct: 331 TILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRKAKLLLGWEPVVPLEEGLNKAIH 390
Query: 418 DFRQRI 423
FR+ +
Sbjct: 391 YFRKEL 396
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 200/306 (65%), Positives = 238/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI+VTGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 90 RILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +LGWEP V L +GL K +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 418 DFRQRI 423
FR+ +
Sbjct: 390 YFRKEL 395
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 199/306 (65%), Positives = 238/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 92
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 93 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 152
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 153 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 212
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 213 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 272
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +LGWEP V L +GL K +
Sbjct: 273 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 332
Query: 418 DFRQRI 423
FR+ +
Sbjct: 333 YFRKEL 338
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 199/306 (65%), Positives = 238/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +LGWEP V L +GL K +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 418 DFRQRI 423
FR+ +
Sbjct: 390 YFRKEL 395
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 199/306 (65%), Positives = 238/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +LGWEP V L +GL K +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 418 DFRQRI 423
FR+ +
Sbjct: 390 YFRKEL 395
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 199/306 (65%), Positives = 238/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +LGWEP V L +GL K +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 418 DFRQRI 423
FR+ +
Sbjct: 390 YFRKEL 395
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 199/306 (65%), Positives = 238/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 329
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +LGWEP V L +GL K +
Sbjct: 330 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 389
Query: 418 DFRQRI 423
FR+ +
Sbjct: 390 YFRKEL 395
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 198/306 (64%), Positives = 238/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 67 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 126
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 127 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 186
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNP+G R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 187 EVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 246
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 247 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 306
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +LGWEP V L +GL K +
Sbjct: 307 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 366
Query: 418 DFRQRI 423
FR+ +
Sbjct: 367 YFRKEL 372
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 198/306 (64%), Positives = 237/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 84 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 143
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 144 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 203
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++
Sbjct: 204 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 263
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 264 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEH 323
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + ++I+F +DDP KRKPDI +AK +L WEP V L +GL K +
Sbjct: 324 TILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIRKAKMMLAWEPVVPLEEGLNKAIH 383
Query: 418 DFRQRI 423
FR+ +
Sbjct: 384 YFRKEL 389
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 196/306 (64%), Positives = 236/306 (77%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 88 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 147
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 148 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 207
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y + GVEVR+ARIFNT+G RM ++
Sbjct: 208 EVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMN 267
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ E LTVYG G QTR+FQ+VSDLV GL+ LM P NLGNP E
Sbjct: 268 DGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEH 327
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+LE AQ+++ + + I+F P +DDP +R+PDI +AK LLGWEP V L +GL K ++
Sbjct: 328 TILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQ 387
Query: 418 DFRQRI 423
F + +
Sbjct: 388 YFSREL 393
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
Identities = 195/304 (64%), Positives = 241/304 (79%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
+RI+VTGGAGF+GSHL +RL+ +G V+ +DNFFTG K N+ FE+IRHD++EP
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEP 60
Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
+LLEVD+IY+LACPASPVHY++NPVKTIKT+V+GT+NMLGLAKRV AR L STSEVYGD
Sbjct: 61 ILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGD 120
Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
P HPQ E+YWGNVNPIG+RSCYDEGKR AETL MDYHR GV++RIARIFNTYGPRM
Sbjct: 121 PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAE 180
Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV-GPFNLGNPG 355
DGRVVSNFV QALR E LTVYGDG QTRSF +V DL++GL+ LME + GP NLGNP
Sbjct: 181 HDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNPE 240
Query: 356 EFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKM 415
E ++E A+ + +++I +RP DDP +R+PDI+ A+ +LGWEP+VSL +GL K
Sbjct: 241 ETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGLAKT 300
Query: 416 VKDF 419
++ F
Sbjct: 301 IEYF 304
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 192/306 (62%), Positives = 240/306 (78%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHLVD L+ +G VIVVDNFFTGRK NV H G+ NFELI HD+V PL
Sbjct: 117 RILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHDIVNPL 176
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+E+D+IYHLA PASP HY +NPVKTIKTN +GT+N+LGLAKRV A+ L+ STSEVYGDP
Sbjct: 177 FIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDP 236
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ ETYWG+VNPIG R+CYDEGKR +ETL+ Y + V+VR+ARIFNTYGPRM ++
Sbjct: 237 TVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMN 296
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QALR E +TVYG+GKQTRSFQ+VSDLV+G++ LM + P NLGNP E
Sbjct: 297 DGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNLGNPVEQ 356
Query: 358 TMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
T+ E A+++++ + + I+ EDDP +RKPDI+RA++LL WEPKV L GL + +
Sbjct: 357 TIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQRTIS 416
Query: 418 DFRQRI 423
FR +
Sbjct: 417 YFRNEL 422
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 184/315 (58%), Positives = 242/315 (76%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHLVD+L+ G VI +DN+FTGRK+NV H G+PNFE++ HDVV P
Sbjct: 138 RILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNVEHWIGHPNFEMVHHDVVNPY 197
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP HY +NPVKTIKTN +GT+NMLGLAKRV A LL STSEVYGDP
Sbjct: 198 FVEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVKATVLLASTSEVYGDP 257
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
HPQ ETYWG+VN IG R+CYDEGKR AE+L + Y++ +++RIARIFNT+GPRM ++
Sbjct: 258 EVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGPRMHMN 317
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEF 357
DGRVVSNF+ QAL+ +P+T+YG+G QTRSFQ+V+DLV+GL++LM + P N+GNP E
Sbjct: 318 DGRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYSLPVNIGNPEEH 377
Query: 358 TMLELAQVVQETIDPN-AKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
T+ + A ++++ + + ++I + +DDP +R+PDI RA E + W P+V ++ GL K V
Sbjct: 378 TIGQFATIIRDLVPGSTSEIVNLESQQDDPQQRRPDIRRAAEQISWAPQVHMKDGLLKTV 437
Query: 417 KDFRQRIFGDHKEGG 431
FR I +K GG
Sbjct: 438 DYFRAEI-DRNKRGG 451
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 114/156 (73%), Positives = 128/156 (82%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
RI++TGGAGFVGSHL D+L+ G V VVDNFFTGRK NV H G+ NFELI HDVVEPL
Sbjct: 33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 92
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
+EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 93 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 152
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY 273
HPQ E YWG+VNPIG R+CYDEGKR AET+ Y
Sbjct: 153 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 97/133 (72%), Positives = 113/133 (84%)
Query: 198 FNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS 257
+NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP HPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV 317
CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
Query: 318 YGDGKQTRSFQFV 330
YG G QTR+FQ+V
Sbjct: 122 YGSGSQTRAFQYV 134
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 94/135 (69%), Positives = 107/135 (79%)
Query: 217 LAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
LAKRVGAR LL STSEVYGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y +
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 277 AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 336
GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 337 LMRLMEGEHVGPFNL 351
L+ LM P NL
Sbjct: 153 LVALMNSNVSSPVNL 167
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 94/135 (69%), Positives = 107/135 (79%)
Query: 217 LAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
LAKRVGAR LL STSEVYGDP HPQ E YWG+VNPIG R+CYDEGKR AET+ Y +
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 277 AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 336
GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 337 LMRLMEGEHVGPFNL 351
L+ LM P NL
Sbjct: 153 LVALMNSNVSSPVNL 167
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 88/120 (73%), Positives = 102/120 (85%)
Query: 198 FNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS 257
+NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP HPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV 317
CYDEGKR AET+ Y + GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 109/319 (34%), Positives = 175/319 (54%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFGNPNFELIRHDVV 174
+ ++TGGAGF+GSHL + L+ RG +V +VDNF+ G+ + +M ++ + +
Sbjct: 4 KCLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIPISVLDKNSI 63
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
L+ + D ++HLA ++ I+TN GT N+L A + + + STSEVY
Sbjct: 64 YELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFASTSEVY 123
Query: 235 GD--PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
G P + + +G + I R Y K ETL + Y G+ V I R FN YGP
Sbjct: 124 GKAKPPFSEEGDRLYGATSKI--RWSYAICKTLEETLCLGYAL-EGLPVTIVRYFNIYGP 180
Query: 293 RMCIDDGR---VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPF 349
R DG V+ F++ AL+ E + VYGDG+QTR F +VSD VE +R M+ + G
Sbjct: 181 RA--KDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMDEKVNGEI 238
Query: 350 -NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPH------KRKPDISRAKELLGW 402
N+G+ E ++ E+A+V+++ D ++KI P E PH R+PD+++ K+L+ +
Sbjct: 239 INIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQF 298
Query: 403 EPKVSLRKGLPKMVKDFRQ 421
+ KV+ GL + +K FR+
Sbjct: 299 QAKVTWEDGLKETIKWFRE 317
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 101/314 (32%), Positives = 153/314 (48%)
Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV 173
RK + IV TGGAGF+GSH+VD L+ G V V+DN G + N+ H NP+ D+
Sbjct: 2 RKPIAIV-TGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDLTFEIKDI 60
Query: 174 VE-----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL- 227
E PL VD ++H A V NP+ ++TNV+GT+ +L A+ + L+
Sbjct: 61 CELSAPHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVY 120
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
++S YG P +E + PI + Y K E + + G+ V RIF
Sbjct: 121 AASSSCYG-LADVPTREDH-----PIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIF 174
Query: 288 NTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH 345
N YG R+ G V F Q L +P TV GDG Q R F +V+D+ ++ E
Sbjct: 175 NAYGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRK 234
Query: 346 VGP-FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEP 404
VG +NLG ++ L +++ ++E+ P +P DIS+ K LGWEP
Sbjct: 235 VGETWNLGAGNPQSINRLVELI------GGEVEYIPKRPGEPDCTWADISKIKRDLGWEP 288
Query: 405 KVSLRKGLPKMVKD 418
++ G+ +M+ +
Sbjct: 289 TITFADGVSRMMSE 302
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 100/316 (31%), Positives = 151/316 (47%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
+R +VTG AGF+GS LVDRL+A G SV+ +DNF TGR N+ H N + D+V
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTA 60
Query: 177 ---LLLEVDQ---IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
+LE + ++HLA +P NV+GT+ + A++ G R ++ ++
Sbjct: 61 DLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTS 120
Query: 231 S--EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
S +YG P ++P ET P S Y GK E + G++ N
Sbjct: 121 SGGSIYGTPPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPAN 175
Query: 289 TYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG 347
YGPR + VV+ F L +P V+GDG TR + FV D+V+ +R+ G
Sbjct: 176 VYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGGG 235
Query: 348 -PFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKV 406
FN+G E + +L V + EF P D + DI A+ +LGW P++
Sbjct: 236 LRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQI 295
Query: 407 SLRKGLPKMVKDFRQR 422
L G+ + V+ FR +
Sbjct: 296 ELADGVRRTVEYFRHK 311
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 100/322 (31%), Positives = 155/322 (48%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF----ELIRHDVV 174
I+VTG GF+GSHL + L+ +G V + + N H F E++ D+
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQY---NSFNFWGHLEKSPFLKDMEVVSGDLR 60
Query: 175 EPLLLE-----VDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLL 227
+ E +D I+HL A A P Y P + TNV GTLNML AK+ + F+
Sbjct: 61 DSFFCEKITKNIDAIFHLGALIAIPYSYTA-PQSYVDTNVNGTLNMLEAAKKNEISHFIH 119
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
TSTSEVYG P E + P+ +S Y K A+ + + Y+ + V IAR F
Sbjct: 120 TSTSEVYGTAFYVPIDEKH-----PLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPF 174
Query: 288 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG 347
NTYGPR ++ + Q L GD R FV D EG + L+ +H G
Sbjct: 175 NTYGPRQSAR--AIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFG 232
Query: 348 P-FNLGNPGEFTMLELAQVVQETIDPNAKI-----EFRPNTEDDPHKRKPDISRAKELLG 401
+N+G+ E++M E+ ++Q+ +D KI RP + + D ++ K+
Sbjct: 233 EVYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSE-VFRLCCDANKLKKATN 291
Query: 402 WEPKVSLRKGLPKMVKDFRQRI 423
W+ K+SL +GL + ++ F++ +
Sbjct: 292 WQSKISLEEGLRQSIEYFKENL 313
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 97/321 (30%), Positives = 155/321 (48%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELI---- 169
+G + VV GGAG +GSH VDRL+ + VI+ DNF G +EN+ +P ++
Sbjct: 5 RGKKFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGG 64
Query: 170 ---RHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
+ D++ L VD ++H A Y++ P +TN+ GT N+L G R
Sbjct: 65 DINQTDILNTALKGVDGVFHFAALWLLQCYEY-PRSAFQTNIQGTFNVLETCVAQGVKRL 123
Query: 226 LLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
+ +S++ VYGD L+ P E + P R+ Y K E + YH G+ R
Sbjct: 124 VFSSSASVYGDALEEPMTEAH-----PFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLR 178
Query: 286 IFNTYGPRMCIDDGRV-VSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG 343
N YGPR + V + AL K +P+T+YGDG Q F +V D + M+
Sbjct: 179 YMNVYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMKA 238
Query: 344 EHVGPF-NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGW 402
+ V + N+G ++LELA+ +Q+ + I+F P R +A E +G+
Sbjct: 239 DTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTTFVKNRIGCPKKAAEQIGF 298
Query: 403 EPKVSLRKGLPKMVKDFRQRI 423
+ +V L +GL ++++ R I
Sbjct: 299 KAEVGLTEGLQRLIEWRRSHI 319
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 101/323 (31%), Positives = 158/323 (48%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGD--------SVIVVDNF-FTGRKENVMHHFGNPNFE 167
++I+VTGGAGF+GSH V LI+ GD V VVD + G N+ +P F
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFS 59
Query: 168 LIRHDVVEPLLLEVDQIYH--LACPASPVHYKFNPVKT---IKTNVVGTLNMLGLAKR-- 220
+R D+ + L+E H +A A+ H + V + + +N+VGT +L A R
Sbjct: 60 FVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHH 119
Query: 221 VGARFLLTSTSEVYGDPLQHPQKET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
+G RFL ST EVYG +T W +P+ S Y K ++ L + YH+ G+
Sbjct: 120 IG-RFLHVSTDEVYGSI------DTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGM 172
Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR 339
+V + R N YGPR + +++ FV + L + VYGDG+ R + VSD GL
Sbjct: 173 DVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLAL 230
Query: 340 LMEGEHVGP-FNLGNPGEFTMLELAQVVQETID-PNAKIEFRPNTEDDPHKRKPDISRAK 397
+ G +++G E T LEL +++ E P ++I F + + + D S+
Sbjct: 231 ALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIA 290
Query: 398 ELLGWEPKVSLRKGLPKMVKDFR 420
LG+ P+V G+ + V +R
Sbjct: 291 GELGYRPRVDFTDGIAETVAWYR 313
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 92/321 (28%), Positives = 158/321 (49%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDS--VIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
++VTGGAGF+GSHL+ L R +I VDN + +N+ + ++ I DV +
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68
Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 227
PL ++ +D ++H A + P + ++ NV GT ++ + RF+
Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIY 128
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
ST EVYGD + P E ++P + Y K AE++ Y I R
Sbjct: 129 ISTDEVYGDSVDQPFDE-----LSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSS 183
Query: 288 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG 347
N YGPR + +V+ F++ +++ T+ G G Q+R F +VSD+ + + +ME +G
Sbjct: 184 NVYGPRQHHE--KVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGILG 241
Query: 348 P-FNLGNPGEFTMLELA-QVVQETIDP-NAKI--EFRPNTEDDP--HKRKPDISRAKELL 400
+N+G E +++LA ++VQ T+ +A+ ++ ED P R P S L
Sbjct: 242 EIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNSVKLHRL 301
Query: 401 GWEPKVSLRKGLPKMVKDFRQ 421
GW PKV+ +G+ + V+ + +
Sbjct: 302 GWRPKVAWTEGIRRTVQWYEE 322
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 299 (110.3 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 88/310 (28%), Positives = 144/310 (46%)
Query: 119 IVVTGGAGFVGSHLVDRLIARG---DSVIV-VDNF-FTGRKENVMHHFGNPNFELIRHDV 173
++VTG AGF+GS V L+ G D V+ +D + G +N+ G+P + R D+
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 174 VE-P---LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
+ P ++ DQ+ HLA + + ++TNV GT +L A R G A F+
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
ST EVYG L+H W P+ S Y K + + L + +H G++VR+ R N
Sbjct: 125 STDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 289 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP 348
YGPR + +++ F+ + + +YGDG R + V D V G+ + G
Sbjct: 180 NYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGR 237
Query: 349 -FNLGNPGEFTMLELAQVVQETIDPN-AKIEFRPNTEDDPHKRKPDISRAKELLGWEPKV 406
+N+G + EL ++ E + +E+ + + + D +R + LG+ P V
Sbjct: 238 VYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAV 297
Query: 407 SLRKGLPKMV 416
L GL V
Sbjct: 298 DLADGLAATV 307
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 293 (108.2 bits), Expect = 8.7e-26, P = 8.7e-26
Identities = 100/322 (31%), Positives = 147/322 (45%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV----- 173
+VTGGAGF+G + V ++RG V+ +D + G + GN + ++ D+
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL 64
Query: 174 VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK----------RV 221
V LL E D + + A + P I+TNVVGTL +L + R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 222 GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
RFL ST EVYG L K T P S Y K ++ L +H G+ V
Sbjct: 125 AFRFLHVSTDEVYGT-LGETGKFT---ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
N YGP + +++ +A+AL EPL VYGDGKQ R + FVSD E + ++
Sbjct: 181 LTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVL 238
Query: 342 EGEHVGP-FNLGNPGEFTMLELAQVVQETIDPNAKIEF-RPNTE------DDP-HKRKP- 391
VG +N+G E +E+ Q + +D + E +P D P H R+
Sbjct: 239 AKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYA 298
Query: 392 -DISRAKELLGWEPKVSLRKGL 412
D S+ K+ LGWEP + +G+
Sbjct: 299 IDASKLKDELGWEPAYTFEQGI 320
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 289 (106.8 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 94/337 (27%), Positives = 157/337 (46%)
Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIV-VDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
R++VTGGAGF+ SH++ L+ D +IV +D + +N+ N++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 175 EP----LLLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RFL 226
+ LL EV++I + A+ H + V+ + NV GT ++ A G +F+
Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFI 138
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
ST EVYG L E+ +P + Y K AE Y V I R
Sbjct: 139 YVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 287 FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM-EGEH 345
N YGP + +V+ F++ ++G G Q R+F + +D+VE + ++ +GE
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEP 251
Query: 346 VGPFNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTEDDPHK--RKPDISRAKEL 399
+N+G E ++++LA Q+++ET + + D PH R P S
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHS 311
Query: 400 LGWEPKVSLRKGLPKMVKDFRQRIFGDHKEGGAGATP 436
LGW+PKV +G+ K V+ +R+ F + K P
Sbjct: 312 LGWKPKVPWEEGIKKTVEWYRKN-FHNWKNAEKALEP 347
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 288 (106.4 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 100/326 (30%), Positives = 148/326 (45%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV----- 173
+VTG AGF+G + V ++RG V+ +D + G + GN + ++ D+
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL 64
Query: 174 VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK----------RV 221
V LL E D + + A + P I+TNVVGTL +L + R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 222 GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
RFL ST EVYG L K T P S Y K ++ L +H G+ V
Sbjct: 125 AFRFLHVSTDEVYGT-LGETGKFT---ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
N YGP + +++ +A+AL EPL VYGDGKQ R + FVSD E + ++
Sbjct: 181 LTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVL 238
Query: 342 EGEHVGP-FNLGNPGEFTMLELAQVVQETIDPNAKIEF-RPNTE------DDP-HKRKP- 391
VG +N+G E +E+ Q + +D + E +P D P H R+
Sbjct: 239 AKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYA 298
Query: 392 -DISRAKELLGWEPKVSLRKGLPKMV 416
D S+ K+ LGWEP + +G+ + V
Sbjct: 299 IDASKLKDELGWEPAYTFEQGIAQTV 324
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 287 (106.1 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 93/324 (28%), Positives = 158/324 (48%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
++I+VTGGAGF+GS V R A +I+VD + G + + + DV +
Sbjct: 1 MKILVTGGAGFIGSAFV-RKYAYDHELIIVDKLTYAGDLRRIEEV--RDRIKFYKADVAD 57
Query: 176 PLLLEVDQIYHLACPASPVHYKF---------NPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
+E +I+ P + VH+ +P I+TNV GT ML +++ G +F
Sbjct: 58 KTAIE--EIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKF 115
Query: 226 LLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
+ ST EVYG+ KE + +P+ S Y K A+ L YHR G+ V +AR
Sbjct: 116 VHISTDEVYGEL----GKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVAR 171
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME-GE 344
N YGP + +++ + +AL EP+ VYG G R + +V D +E + L++ G+
Sbjct: 172 PCNNYGPWQYPE--KLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGK 229
Query: 345 HVGPFNLGNPGEFTMLELAQVVQETID-PNAKIEFRPNTEDDP-HKRKPDISRAKELLG- 401
+N+G+ E +E+ + + + P + I F ED P H + ++ K +
Sbjct: 230 PGEAYNIGSGEEKGNIEVVKEILRILGKPESLITF---VEDRPGHDFRYSLNSKKIKMNY 286
Query: 402 -WEPKVSLRKGLPKMVKDFRQRIF 424
W+ KV+ +G+ + V D+ ++ F
Sbjct: 287 AWKHKVNFNEGI-RFVIDWYKKHF 309
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 306 (112.8 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 95/325 (29%), Positives = 158/325 (48%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNF-FTGRKENVMHHFGNPNFELIRH 171
K I++TG AGF+ SH+ +RLI D ++V+D + +N+ F +PNF+ ++
Sbjct: 7 KPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKG 66
Query: 172 DV-----VEPLLL--EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ V LL+ +D I H A V F N + K N+ GT +L K G
Sbjct: 67 DIASDDLVNYLLITENIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 125
Query: 224 --RFLLTSTSEVYGDPLQHPQKETYWGN--VNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
RF+ ST EVYG+ ++ GN + + + Y K AE L M Y R G+
Sbjct: 126 IRRFIHVSTDEVYGET----DEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 181
Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-M 338
V R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E +
Sbjct: 182 PVITTRGNNVYGPNQFPE--KMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEV 239
Query: 339 RLMEGEHVGPFNLGNPGEFTMLELAQVVQETI--DPNAKIEFRPNTEDDPHKRKPDISRA 396
L +GE +N+G E ++++A+ + + DP + I+F N + + D +
Sbjct: 240 VLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKL 299
Query: 397 KELLGWEPKVSLRKGLPKMVKDFRQ 421
K+L GW+ + + GL K + + Q
Sbjct: 300 KKL-GWQERTNWEDGLKKTMDWYTQ 323
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 285 (105.4 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 90/308 (29%), Positives = 143/308 (46%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
+ L+I +TG GF+ SH+ RL G VI D + E++ F L+ V+
Sbjct: 26 ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 82
Query: 175 EPLL--LE-VDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 229
E L E VD +++LA + + + N + N + + NM+ A+ G RF S
Sbjct: 83 ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 142
Query: 230 TSEVYGD--PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
++ +Y + L+ + P + Y K E L Y++ G+E RI R
Sbjct: 143 SACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFH 202
Query: 288 NTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE 344
N YGP GR + F +A + ++GDG QTRSF F+ + VEG++RL + +
Sbjct: 203 NIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 262
Query: 345 HVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEP 404
P N+G+ +M E+A++V + I P E R D + KE LGW P
Sbjct: 263 FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEG-VRGRNSDNNLIKEKLGWAP 321
Query: 405 KVSLRKGL 412
+ L++GL
Sbjct: 322 NMRLKEGL 329
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 303 (111.7 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 93/321 (28%), Positives = 159/321 (49%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLI-ARGD-SVIVVDNF-FTGRKENVMHHFGNPNFELIRH 171
K I++TG AGF+ SH+ +RL+ + D ++V+D + +N+ +PNF+ ++
Sbjct: 5 KPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKG 64
Query: 172 DV-----VEPLLL--EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ V LL+ E+D I H A V F N + K N+ GT +L K G
Sbjct: 65 DIASADLVNYLLITEEIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
Query: 224 --RFLLTSTSEVYGDPLQHPQKETYWGN--VNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
RF+ ST EVYG+ ++ GN + + + Y K AE L M Y R G+
Sbjct: 124 IRRFIHVSTDEVYGET----DEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-M 338
V R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E +
Sbjct: 180 PVITTRGNNVYGPNQFPE--KLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEV 237
Query: 339 RLMEGEHVGPFNLGNPGEFTMLELAQVVQET--IDPNAKIEFRPNTEDDPHKRKPDISRA 396
L +GE +N+G E ++++A + + IDP++ I++ N + + D +
Sbjct: 238 VLHKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKL 297
Query: 397 KELLGWEPKVSLRKGLPKMVK 417
K+L GW + + +GL K ++
Sbjct: 298 KKL-GWCERTNWEEGLRKTME 317
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 276 (102.2 bits), Expect = 8.4e-24, P = 8.4e-24
Identities = 94/347 (27%), Positives = 157/347 (45%)
Query: 109 PLGLKRK-GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV--DNF-FTGRKENVMHHFGNP 164
PLG R++VTGGAGF+ SH++ L+ + ++V D + +N+
Sbjct: 9 PLGPPNSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQ 68
Query: 165 NFELIRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGL 217
N++ I+ D+ + LL E ++I + A+ H + V+ + NV GT +L
Sbjct: 69 NYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSA 128
Query: 218 AKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
A +F+ ST EVYG L KE + +P + Y K AE Y
Sbjct: 129 AHEARVEKFIYVSTDEVYGGSLD---KE--FDESSPKQPTNPYASSKAAAECFVQSYWER 183
Query: 277 AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 336
V I R N YGP + +V+ F++ ++G G QTR+F + +D+VE
Sbjct: 184 YKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEA 241
Query: 337 LMRLMEGEHVGP-FNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTEDDPHK--R 389
+ +++ G +N+G E ++L+LA Q+++ET + + D P R
Sbjct: 242 FLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMR 301
Query: 390 KPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFGDHKEGGAGATP 436
P S LGW PKV ++G+ K ++ +R+ F + K P
Sbjct: 302 YPMKSEKIHGLGWRPKVPWKEGIKKTIEWYREN-FHNWKNAEKALEP 347
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 296 (109.3 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 93/321 (28%), Positives = 156/321 (48%)
Query: 119 IVVTGGAGFVGSHLVDRLI-ARGD-SVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV-- 173
I++TG AGF+ SH+ +RLI + D ++V+D + +N+ +PNF+ ++ D+
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 174 ---VEPLLLE--VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 225
V LL+ +D I H A V F N + K N+ GT +L K G RF
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 226 LLTSTSEVYGDPLQHPQKETYWGN--VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
+ ST EVYG+ ++ GN + + + Y K AE L M Y R G+ V
Sbjct: 128 IHVSTDEVYGET----DEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG 343
R N YGP + +++ F+ A+R + L ++GDG RS+ + D+ E ++
Sbjct: 184 TRGNNVYGPNQFPE--KLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241
Query: 344 EHVGP-FNLGNPGEFTMLELAQVVQE--TIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
VG +N+G E + ++A+ + + +DP A I+F N + + D + K+L
Sbjct: 242 GEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL- 300
Query: 401 GWEPKVSLRKGLPKMVKDFRQ 421
GW + + +GL K + + Q
Sbjct: 301 GWSERTTWEEGLKKTMDWYTQ 321
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 274 (101.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 87/317 (27%), Positives = 151/317 (47%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF----FTGRKENVMHHFGNPNFELIRHD 172
+ I+VTGGAGF+GS+ V ++ ++ ++ NF ++G NV +PN+ ++ +
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKII-NFDALTYSGNLNNVKSIQDHPNYYFVKGE 59
Query: 173 VVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-AR 224
+ LLE V I + A + NP+ TNV+GT+ +L L K+ +
Sbjct: 60 IQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIK 119
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
+ ST EVYG L + T P+ S Y K +A+ + + Y++ + V +
Sbjct: 120 LVQVSTDEVYGS-LGKTGRFT---EETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVT 175
Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE 344
R N YGP + +++ V AL + L +YGDG R + V+D + ++
Sbjct: 176 RCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKG 233
Query: 345 HVGP-FNLGNPGEFTMLELAQVVQETIDPNAK-IEFRPNTEDDPHKRKPDIS--RAKELL 400
VG +N+G E T +E+ + + + K IE+ T+ H R+ I+ + K
Sbjct: 234 RVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYV--TDRLGHDRRYAINAEKMKNEF 291
Query: 401 GWEPKVSLRKGLPKMVK 417
WEPK + +GL + V+
Sbjct: 292 DWEPKYTFEQGLQETVQ 308
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 274 (101.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 101/329 (30%), Positives = 156/329 (47%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARG-DS-VIVVDNFFTGRKENVMHHFGNP----NFEL 168
KG +I+VTG GF+GSHL + L+ RG D+ V N F + H +P + ++
Sbjct: 4 KGKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSW--GWLDHL-DPELLKSLDV 60
Query: 169 IRHDVVEP-----LLLEVDQIYHLACP-ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+ +P + D + HLA A P Y +P + TNV GTLN++ A+ +G
Sbjct: 61 FAGDIRDPHGVREAMKGCDVVLHLAALIAIPYSYH-SPDTYVDTNVKGTLNVVQAARELG 119
Query: 223 -ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
A+ + TSTSEVYG P E + P+ +S Y K A+ + M ++ V
Sbjct: 120 VAKVVHTSTSEVYGTARFVPITEEH-----PLQGQSPYSASKIGADQIAMSFYSSFDTPV 174
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
I R FNTYGPR + + Q G TR +V+D V G + +
Sbjct: 175 AIIRPFNTYGPRQSAR--AFIPTVITQIASGARTLRLGALHPTRDLNYVADTVAGFIAVA 232
Query: 342 EGEH-VGP-FNLGNPGEFTMLELAQVVQETIDPNAKI-----EFRPNTEDDPHKRKPDIS 394
E E VG N+G+ E +M E A+++ + + + +I RP+ + + + D S
Sbjct: 233 ESEKSVGEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPD-KSEVERLWADTS 291
Query: 395 RAKELL----GWEPKVSLRKGLPKMVKDF 419
+AK LL + K LR+GL + V+ F
Sbjct: 292 KAKRLLDHGQNYGGKDGLRRGLVETVEWF 320
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 273 (101.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 89/337 (26%), Positives = 155/337 (45%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV--DNF-FTGRKENVMHHFGNPNFELIRHDVV 174
R++VTGGAGF+ SH++ L+ + +++ D + +N+ N++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 175 EP----LLLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RFL 226
+ LL E ++I + A+ H + V+ + NV GT ++ A +F+
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
ST EVYG L KE + +P + Y K AE Y V I R
Sbjct: 139 YVSTDEVYGGSLD---KE--FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 287 FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV 346
N YGP + +V+ F++ ++G G QTR+F + +D+VE + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 347 GP-FNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTEDDPHK--RKPDISRAKEL 399
G +N+G E ++L+LA Q+++ET + + +D P R P S
Sbjct: 252 GEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHG 311
Query: 400 LGWEPKVSLRKGLPKMVKDFRQRIFGDHKEGGAGATP 436
LGW PKV ++G+ K ++ +R+ F + K P
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYREN-FHNWKNAEKALEP 347
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 273 (101.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 95/320 (29%), Positives = 156/320 (48%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
++VTGG GF+GSHLVD L+++G V V+DN G EN+ E+I ++ + L
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCG-QRDKLEIINGNLTDKFL 62
Query: 179 LE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
L+ + ++HLA A+ + + ++ N + T N+L +R R + S++
Sbjct: 63 LDSAVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLVFASSAA 122
Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
VYG+ E Y G + PI S Y K E L Y G++ + R N G
Sbjct: 123 VYGESGLTVLDEDY-GPLLPI---SLYGASKLAGEGLISAYSHLYGLKATMFRFANIVGS 178
Query: 293 RMCIDDGRVVSNFVAQALRKEP--LTVYGDGKQTRSFQFVSDLVEGLMRLMEG--EHVGP 348
R G V+ +FV++ LR+ P L V GDG Q++ + VSD V G++ E +++G
Sbjct: 179 RR--HSG-VIYDFVSR-LRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNLGL 234
Query: 349 FNLGNPGEFTMLELAQVVQETID-PNAKIEFRPNTE----DDPHKRKPDISRAKELLGWE 403
+NLG P + ++A +V + N + D P R DISR + L G++
Sbjct: 235 YNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRF-DISRIRTL-GFK 292
Query: 404 PKVSLRKGLPKMVKDFRQRI 423
PK + + + +K+ + I
Sbjct: 293 PKFTSLQAVKLAIKETLKEI 312
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 269 (99.8 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 93/355 (26%), Positives = 160/355 (45%)
Query: 102 VNSGGKI-PLGLKRK-GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV--DNF-FTGRKEN 156
++S G+ PLG R++VTGGAGF+ SH++ L+ + +++ D + +N
Sbjct: 1 MSSAGRAEPLGPPSSFAKRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKN 60
Query: 157 VMHHFGNPNFELIRHDVVEP----LLLEVDQIYHLACPASPVHYKFNPVKTIK---TNVV 209
+ N++ I+ D+ LL E ++I + A+ H + V+ + NV
Sbjct: 61 LETISNKQNYKFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVY 120
Query: 210 GTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET 268
GT ++ A +F+ ST EVYG L KE + +P + Y K AE
Sbjct: 121 GTHVLVSAAHEARVEKFIYVSTDEVYGGSLD---KE--FDESSPKQPTNPYASSKAAAEC 175
Query: 269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ 328
Y I R N YGP + +V+ F++ ++G G QTR+F
Sbjct: 176 FVQSYWERYKFPAVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFL 233
Query: 329 FVSDLVEGLMRLMEGEHVGP-FNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTE 383
+ +D+VE + +++ G +N+G E ++L+LA Q+++ET + +
Sbjct: 234 YATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVN 293
Query: 384 DDPHK--RKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFGDHKEGGAGATP 436
D P R P S + LGW PKV ++G+ K + +R+ F + K P
Sbjct: 294 DRPTNDMRYPMKSEKIQGLGWRPKVPWKEGIKKTIDWYREN-FHNWKNAEKALEP 347
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 268 (99.4 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 85/322 (26%), Positives = 150/322 (46%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV--DNF-FTGRKENVMHHFGNPNFELIRHDVV 174
R++VTGGAGF+ SH++ L+ + +++ D + +N+ N++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 175 EP----LLLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RFL 226
+ LL E ++I + A+ H + V+ + NV GT ++ A +F+
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
ST EVYG L KE + +P + Y K AE Y V I R
Sbjct: 139 YVSTDEVYGGSLD---KE--FDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 287 FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV 346
N YGP + +V+ F++ ++G G QTR+F + +D+VE + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 347 GP-FNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTEDDPHK--RKPDISRAKEL 399
G +N+G E ++++LA Q+++ET + + D P R P S
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHG 311
Query: 400 LGWEPKVSLRKGLPKMVKDFRQ 421
LGW PKV ++G+ K ++ +R+
Sbjct: 312 LGWRPKVPWKEGIKKTIEWYRE 333
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 267 (99.0 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 97/331 (29%), Positives = 150/331 (45%)
Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVEP 176
I+VTGGAGF+GS +V +I DSV+ +D + G E++ NP + + D+ +
Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDR 68
Query: 177 LLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----------K 219
L+ D + HLA + + + I+TN+VGT ++L A K
Sbjct: 69 AELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEK 128
Query: 220 RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
R RF ST EVYGD H + + P S Y K A+ L + R +
Sbjct: 129 REAFRFHHISTDEVYGD--LHGTDDLFT-ETTPYAPSSPYSASKAAADHLVRAWQRTYRL 185
Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR 339
++ N YGPR + +++ + AL +PL VYGDG Q R + FV D L +
Sbjct: 186 PSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQ 243
Query: 340 LMEGEHVGP-FNLGNPGEFTMLELAQVV---QETIDPN-----AKIE-FRPNTEDDP-HK 388
++ VG +N+G E T LE+ + + E + P A+ E +D P H
Sbjct: 244 VVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHD 303
Query: 389 RK--PDISRAKELLGWEPKVSLRKGLPKMVK 417
+ D ++ + LGW P + GL K V+
Sbjct: 304 ARYAVDAAKIRRDLGWLPLETFESGLRKTVQ 334
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 267 (99.0 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 88/337 (26%), Positives = 153/337 (45%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV--DNF-FTGRKENVMHHFGNPNFELIRHDVV 174
R++VTGGAGF+ SH++ L+ + +++ D + +N+ N++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 175 EP----LLLEVDQIYHLACPASPVHYKFNPVKTIK---TNVVGTLNMLGLAKRVGA-RFL 226
+ L E ++I + A+ H + V+ + NV GT ++ A +F+
Sbjct: 79 DSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEKFI 138
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
ST EVYG L E+ +P + Y K AE Y V I R
Sbjct: 139 YVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 287 FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM-EGEH 345
N YGP + +V+ F++ ++G G Q R+F + +D+VE + ++ +GE
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEP 251
Query: 346 VGPFNLGNPGEFTMLELA----QVVQETIDPNAKIEFRPNTEDDPHK--RKPDISRAKEL 399
+N+G E ++++LA Q+++ET + + D PH R P S
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIHS 311
Query: 400 LGWEPKVSLRKGLPKMVKDFRQRIFGDHKEGGAGATP 436
LGW+PKV +G+ K V+ +R+ F + K P
Sbjct: 312 LGWKPKVPWEEGIKKTVEWYREN-FHNWKNAEKALEP 347
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 266 (98.7 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 94/335 (28%), Positives = 155/335 (46%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVV 174
+ I+VTGG+GF+GS L+ +I D VI +D ++ + NP + + D+
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 175 EPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK-------- 219
+ ++E D + HLA + ++TN+VGT +L +AK
Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 121
Query: 220 --RVGARFLLTSTSEVYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
+ RF ST EVYGD L P + +P S Y K + L +HR
Sbjct: 122 AKKTTFRFHHISTDEVYGDLSLSEPA----FTEQSPYHPSSPYSASKAASNHLVQAWHRT 177
Query: 277 AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 336
G+ V I N YG + +++ ++ A+ +PL +YGDG+Q R + FV D V+
Sbjct: 178 YGLPVIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQA 235
Query: 337 LMRLMEGEHVGP-FNLGNPGEFTMLE----LAQVVQETID--PNAKIEFRPN----TEDD 385
++ VG +N+G E T LE + Q+++E PN I++ + +D
Sbjct: 236 SYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPN-HIKYYEDLMTFVKDR 294
Query: 386 P-H--KRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
P H + D S+ LGW+P+++ +GL + VK
Sbjct: 295 PGHDVRYSLDCSKIHAELGWQPQITFEQGLRQTVK 329
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 265 (98.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 91/326 (27%), Positives = 149/326 (45%)
Query: 119 IVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV-- 173
++VTGGAGF+GS+ ++ + G VI +D + G N+ NP + ++ D+
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFVKGDIGD 69
Query: 174 ---VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR---VGA-- 223
V +L E +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 70 ADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIE 129
Query: 224 --RFLLTSTSEVYGDPLQHPQKET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE 280
RFL ST EVYG ET Y+ P+ S Y K ++ L Y+ G+
Sbjct: 130 RFRFLHVSTDEVYGT-----LGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLP 184
Query: 281 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL 340
V R N YGP + +++ + + +PL VYGDG+ R + V D + +
Sbjct: 185 VLTTRCSNNYGPFQFPE--KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETV 242
Query: 341 MEGEHVGP-FNLGNPGEFTMLELAQVVQETID-----PNAKIEFRPNTEDDP--HKRKPD 392
++G G FN+G E+ +++ ++ + +D P + D H R+
Sbjct: 243 LKGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRRYA 302
Query: 393 ISRAK--ELLGWEPKVSLRKGLPKMV 416
IS AK LGWEP + +G+ + V
Sbjct: 303 ISAAKIKRELGWEPSYTFERGIAETV 328
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 259 (96.2 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 85/309 (27%), Positives = 139/309 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
I++ GGAG++GSH V +L+ G SV+VVDN TG ++ + N +L + +
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVF 63
Query: 179 LE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 235
+ ++ + H A + P++ NV G L +L + +F+ +ST+ YG
Sbjct: 64 TQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYG 123
Query: 236 D-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG--P 292
+ + +ET NP Y E K E + Y + + + +I R FN G P
Sbjct: 124 EVDVDLITEETM---TNPTNT---YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATP 177
Query: 293 RMCI-DDGRVVSNFVAQALR-----KEPLTVYGDGKQT------RSFQFVSDLVE----G 336
I +D R ++ + L+ +E + ++GD T R + V DLV G
Sbjct: 178 NGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLG 237
Query: 337 LMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRA 396
L L G +NLGN F++ E+ V+E + E P DP + +A
Sbjct: 238 LKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKA 297
Query: 397 KELLGWEPK 405
KE LGW+P+
Sbjct: 298 KEKLGWDPR 306
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 254 (94.5 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 94/332 (28%), Positives = 150/332 (45%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
+I+VTGGAGF+GS +V +I DSV+ +D + G E++ NP + + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62
Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA---------- 218
L+ D + HLA + + + I+TN+VGT N+L A
Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSE 122
Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG 278
K RF ST EVYGD L + + P S Y K +++ L + R G
Sbjct: 123 KHEAFRFHHISTDEVYGD-LSGT--DDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 279 VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLM 338
+ + N YGP + +++ + AL +PL VYGDG Q R + FV D L
Sbjct: 180 LPTIVTNCSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 339 RLMEGEHVGP-FNLGNPGEFTMLELAQVV---QETIDPN-----AKIE-FRPNTEDDP-H 387
+++ VG +N+G E +E+ + + E + P A+ E +D P H
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 388 KRK--PDISRAKELLGWEPKVSLRKGLPKMVK 417
+ D ++ + LGW+P + GL K V+
Sbjct: 298 DARYAVDTAKIRRDLGWQPLETFESGLRKTVQ 329
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 262 (97.3 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 87/352 (24%), Positives = 158/352 (44%)
Query: 104 SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV--DNF-FTGRKENVMHH 160
SG + + R R++VTGGAGF+ SH+V L+ + +++ D + +N+
Sbjct: 10 SGPPVREEVPRFEKRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETV 69
Query: 161 FGNPNFELIRHDVVEPLLLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTL 212
N++ I+ D+ EP ++ +D + H A V F + ++ NV GT
Sbjct: 70 SEKENYKFIQGDICEPHFIKQLFETEKIDIVLHFAAQTH-VDLSFWHALEFTYVNVYGTN 128
Query: 213 NMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM 271
++ A +F+ ST EVYG E+ +P + Y K AE
Sbjct: 129 VLVAAAHEANVEKFVYVSTDEVYGGSTDQEFDES-----SPKCPTNPYASSKAAAECFVQ 183
Query: 272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 331
Y V I R N YGP + +V+ F++ + ++G G Q R+F + +
Sbjct: 184 SYWERYQFPVVITRSSNVYGPHQYPE--KVIPKFISLLQQNRKCCIHGSGLQRRNFLYAT 241
Query: 332 DLVEGLMRLM-EGEHVGPFNLGNPGEFTMLELAQ----VVQETIDPNAKIEFRPNTEDDP 386
D+VE + ++ EG+ +N+G E ++++LA+ ++++T + + +D P
Sbjct: 242 DVVEAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRP 301
Query: 387 HK--RKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFGDHKEGGAGATP 436
R P S LGW PKV ++G+ K ++ +++ F + K P
Sbjct: 302 TNDLRYPMSSEKMHNLGWRPKVPWKEGIKKTIEWYKEN-FHNWKNAEKALEP 352
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 231 (86.4 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 76/239 (31%), Positives = 113/239 (47%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHHF-GNPNFELIRHDV 173
I+VTG AGF+G HL RL+ RGD V+ +DN + K + + G F +R +
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTSL 63
Query: 174 VE-PLLLEV------DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGARF 225
+ P L ++ D + +LA A V Y NP + +N+VG +N+L + G +
Sbjct: 64 ADRPALEDLFAGQRFDVVVNLAAQAG-VRYSITNPHAYVDSNLVGFINILEGCRHHGVKH 122
Query: 226 LL-TSTSEVYGDPLQHPQKETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
L+ S+S VYG P + NV+ P+ S Y K+ E + Y G+
Sbjct: 123 LVYASSSSVYGANTAMPFSIHH--NVDHPV---SLYAATKKANELMAHTYSSLYGLPTTG 177
Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
R F YGP D + F L P+ VY GK R F +V D+VEG+ R+M+
Sbjct: 178 LRFFTVYGPWGRPDMALFL--FTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMD 234
Score = 61 (26.5 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 13/72 (18%), Positives = 32/72 (44%)
Query: 349 FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSL 408
+N+GN +L + +++ + A+ P D D+ +G++P +
Sbjct: 260 YNIGNNNPVELLAFIEAIEQNLGITAQKNLLPLQAGDVPATYADVDDLMNDVGFKPATPI 319
Query: 409 RKGLPKMVKDFR 420
+G+ + V+ +R
Sbjct: 320 GEGIERFVEWYR 331
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 245 (91.3 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 83/316 (26%), Positives = 141/316 (44%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV 173
+R++VTGGAGF+G++ V + D+V V+D + GR+E++ L++ D+
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADV--EDAIRLVQGDI 58
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
V L+ E D + H A + + NP + TNV+GT +L +R G R
Sbjct: 59 TDAELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHI 118
Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
ST EVYGD L+ + + + P S Y K A+ L + R GV I+ N
Sbjct: 119 STDEVYGD-LELDDRARFTEST-PYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSN 176
Query: 289 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG- 347
YGP ++ + + + L +YG G R + V D + R+++ +G
Sbjct: 177 NYGPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGR 234
Query: 348 PFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKP--DISRAKELLGWEPK 405
+ + + GE L + + + +D + +F T+ H + D S + L W PK
Sbjct: 235 TYLISSEGERDNLTVLRTLLRLMDRDPD-DFDHVTDRVGHDLRYAIDPSTLYDELCWAPK 293
Query: 406 -VSLRKGLPKMVKDFR 420
+GL + +R
Sbjct: 294 HTDFEEGLRTTIDWYR 309
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 224 (83.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHHFGN-PNFELIRH 171
+R +VTG AGF+G HL RL+ARGD ++ +DN + KE + P+F +
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKL 65
Query: 172 DVVEPL----LLE---VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ + L + D + HLA A V Y NP + +N+VG ++L +
Sbjct: 66 DLADRQGMTDLFQKHLFDTVVHLAAQAG-VRYSLTNPYAYVDSNLVGFAHILEGCRHQSV 124
Query: 224 RFLL-TSTSEVYGDPLQHPQKETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
+ L+ S+S VYG ++P E+ NV+ PI + Y K+ E + Y +
Sbjct: 125 KHLVFASSSSVYGANEKYPFSES--DNVDHPIAL---YAASKKANELMAHSYAHLFQLPC 179
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
R F YGP D + F L +P+ VY GK +R F ++ D+V+G++ +
Sbjct: 180 TGLRFFTVYGPWGRPD--MALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTL 237
Query: 342 E 342
+
Sbjct: 238 D 238
Score = 71 (30.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 349 FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSL 408
+N+G+ + ++++T++ A F P D + D+S+ ++ + P+ L
Sbjct: 264 YNIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPL 323
Query: 409 RKGLPKMVKDFRQ 421
+KG+ V+ + Q
Sbjct: 324 QKGVKNFVEWYLQ 336
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 261 (96.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 90/317 (28%), Positives = 141/317 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSV--IVVDNFFTGRK-ENVMHHFGN-PNFELIRHDVV 174
+V+TGG GF+GS+ V+ + + + +D +NV N P ++L+ D+
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 175 -EPLLL------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RF 225
E +L E+D + H A + + ++ NV+ + L + G RF
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRF 127
Query: 226 LLTSTSEVYGDP--LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
+ ST EVYGD ++ Q + + + P G + Y K E Y + +
Sbjct: 128 VHISTDEVYGDSDLSENEQGKVEFSRLVP-G--NPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME- 342
AR+ N YGP D +VV F+ A + T+ G GKQ RS+ FV D GL + E
Sbjct: 185 ARMNNIYGPNQW--DVKVVPRFIEIAKVRGEYTIQGSGKQLRSWLFVDDASAGLKAVCEK 242
Query: 343 GEHVGPFNLGNPGEFTMLELAQVVQETIDPN-AKIEFRPNTEDDPHKRKPD------ISR 395
GE +NLG E + +LA+ +QE +D + P + P + D I +
Sbjct: 243 GELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLISIEK 302
Query: 396 AKELLGWEPKVSLRKGL 412
AK LGWEP S G+
Sbjct: 303 AKNDLGWEPTTSFDDGM 319
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 247 (92.0 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 92/323 (28%), Positives = 150/323 (46%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSV--IVVDNF-FTGRKENVMHHFGNPNFELIRHDV-- 173
I+VTGGAGF+GS+ V + V V+D + G + N+ G+ EL+ D+
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGD-RVELVVGDIAD 65
Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
V+ L + D I H A + + +P I TN VGT +L A++ RF ST
Sbjct: 66 SELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHHVST 125
Query: 231 SEVYGD-PLQ-----H---P-QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE 280
EVYGD PL+ H P +K T NP S Y K ++ + + R GV+
Sbjct: 126 DEVYGDLPLREDLPGHGEGPGEKFTAETKYNP---SSPYSSTKAASDLIVKAWVRSFGVK 182
Query: 281 VRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLM 338
I+ N YGP I+ R ++N ++ K +YG+GK R + +D G+
Sbjct: 183 ATISNCSNNYGPYQHIEKFIPRQITNILSGIKPK----LYGEGKNVRDWIHTNDHSTGVW 238
Query: 339 RLMEGEHVGP-FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKP--DISR 395
++ +G + +G GE E+ +++ E + K + T+ H + D ++
Sbjct: 239 AILTKGRIGETYLIGADGEKNNKEVLELILEKMS-QPKNAYDHVTDRAGHDLRYAIDSTK 297
Query: 396 AKELLGWEPK-VSLRKGLPKMVK 417
+E LGW+P+ + +GL +K
Sbjct: 298 LREELGWKPQFTNFEEGLEDTIK 320
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 226 (84.6 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 72/267 (26%), Positives = 127/267 (47%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
+RI+VTGGAGF+GS LV LI + +SV++ D + E++ N + ++ D+
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 175 EPLLLEV-------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ LE D + HLA + P + I+TN+VGT +L + + +
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACR---SYYQT 117
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGV---RSCYDEG------KRTAETLTMDYHRGAG 278
++ L H + +G++ G+ S YD K +A+ L +HR
Sbjct: 118 LGQAQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYA 177
Query: 279 VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLM 338
+ + I N YGP + +++ V+ AL+ +PL +YG+G+Q R + +V D V+ L
Sbjct: 178 LPIVITNCSNNYGPFQYPE--KLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALY 235
Query: 339 RLMEGEHVGP-FNLGNPGEFTMLELAQ 364
+ +G +N+G E T L + +
Sbjct: 236 LVATQGQLGQTYNIGGSCEQTNLTVVR 262
Score = 56 (24.8 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMVK 417
D S+ + LGW P+ S GL K V+
Sbjct: 306 DASKIQRELGWRPQESFESGLRKTVE 331
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 244 (91.0 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 92/332 (27%), Positives = 148/332 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
+I+VTGGAGF+GS +V +I D+V+ VD + G E++ NP + + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62
Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV------- 221
L+ D + HLA + + + I+TN+VGT N+L A+
Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSE 122
Query: 222 ---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG 278
RF ST EVYGD + + P S Y K +++ L + R G
Sbjct: 123 QHEAFRFHHISTDEVYGDL---GGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 279 VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLM 338
+ + N YGP + +++ + AL +PL VYGDG Q R + FV D L
Sbjct: 180 LPTIVTNCSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 339 RLMEGEHVGP-FNLGNPGEFTMLELAQVV---QETIDPN-----AKIE-FRPNTEDDP-H 387
+++ VG +N+G E +E+ + + E + P A+ E +D P H
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 388 --KRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
+ D ++ + LGW P + GL K V+
Sbjct: 298 DVRYAVDAAKIRRDLGWLPLETFESGLRKTVQ 329
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 246 (91.7 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 75/277 (27%), Positives = 134/277 (48%)
Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
+I++TGGAGF+GSHL L + +IV+D + N+ NF+ + +++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 175 EPLLLE-------VDQIYHLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVGAR-F 225
+ LLE +D + HLA + V F +K + N++GT +L K + F
Sbjct: 71 DSELLENIFEKEKIDIVIHLAA-YTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKF 129
Query: 226 LLTSTSEVYGDPLQHPQKETYWGNVNP-------IGVRSCYDEGKRTAETLTMDYHRGAG 278
+ ST EVYG L + ++N + + Y K AE L Y++
Sbjct: 130 IYVSTDEVYGSGLIEDNDDNN-NSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 279 VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL- 337
+ V I R N YGP+ + +++ F+ L + T++G GK TR++ ++ D+V
Sbjct: 189 LPVIITRANNIYGPKQYPE--KIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFD 246
Query: 338 MRLMEGEHVGPFNLGNPGEFTMLELAQ-VVQETIDPN 373
+ L +GE +N+G E + L++A+ ++ +I+ N
Sbjct: 247 IILRKGEIGNVYNIGTDFEISNLDVAKKIINISINLN 283
Score = 41 (19.5 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 376 IEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPK 414
I+ RP + H+ + S+ L GW+ +S +G+ K
Sbjct: 323 IDDRPFND---HRYNINYSKLSNL-GWKKSISWEEGIEK 357
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 237 (88.5 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 83/319 (26%), Positives = 140/319 (43%)
Query: 117 LRIVVTGGAGFVGSHLVDRLI--ARGDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV 173
+R++VTGGAGF+G++ V + AR S+ V+D + G +E++ L++ D+
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVADR--IRLVQGDI 58
Query: 174 VEPLLL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
+ L+ E D + H A + +P + +NVVGT +L +R R
Sbjct: 59 TDAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 229 STSEVYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
ST EVYGD L +P + + P S Y K A+ L + R GV I+
Sbjct: 119 STDEVYGDLELDNPAR---FNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCS 175
Query: 288 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVG 347
N YGP ++ + + + L +YG G R + V D + R++ +G
Sbjct: 176 NNYGPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIG 233
Query: 348 -PFNLGNPGEFTMLELAQVVQETI--DPNAKIEFRPNTEDDPHKRKP--DISRAKELLGW 402
+ +G E L + + + + + DP+ +F T+ H + D S ++ LGW
Sbjct: 234 RTYLIGAECERNNLTVMRTILKLMGRDPD---DFDHVTDRAGHDLRYAIDPSTLQDELGW 290
Query: 403 EPK-VSLRKGLPKMVKDFR 420
PK GL + +R
Sbjct: 291 APKHTDFEAGLTDTIDWYR 309
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 218 (81.8 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 74/276 (26%), Positives = 130/276 (47%)
Query: 111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHHFGNPNFELI 169
G K + R+++ G GF+G+HL +RL+ R D V + + E + H PNF +
Sbjct: 313 GRKPRRTRVLILGVNGFIGNHLSERLL-RDDKYDVYGLDIGSDAIERLRSH---PNFHFV 368
Query: 170 RHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ +E + + D + L A+P+ Y NP++ + + L ++ +
Sbjct: 369 EGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNK 428
Query: 224 RFLLTSTSEVYGDPLQHPQKETYWGN--VNPIGV-RSCYDEGKRTAETLTMDYHRGA-GV 279
R + STSEVYG Q + N V PI R Y K+ + + Y GA G+
Sbjct: 429 RVIFPSTSEVYG-MCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAY--GAKGL 485
Query: 280 EVRIARIFNTYGPRMC-IDDGRV-----VSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
+ R FN GPR+ +D R+ ++ + + P+ ++ G+Q R F ++D
Sbjct: 486 NFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADG 545
Query: 334 VEGLMRLMEGEHV---GPF-NLGNP-GEFTMLELAQ 364
+E L R+++ E+ G N+GNP E ++ +L +
Sbjct: 546 IEALARIVDNENDCCNGQIINIGNPDNEASIRQLGE 581
Score = 74 (31.1 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 371 DPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDF 419
D +K + +D H RKP I AK LL WEP V + + + + DF
Sbjct: 604 DVESKAFYGAGYQDVEH-RKPSIDNAKRLLNWEPTVEMSETIGNTL-DF 650
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 199 (75.1 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 64/241 (26%), Positives = 112/241 (46%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHHFGNPNFELIRHD 172
++ +VTG AGF+GS +V+RL A G V+ +DN + K+ + + +F I+ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 173 VVEPLLL-------EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVGA 223
+ + ++ + D++ HLA A V Y NP+ +N++G LN+L G
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 224 RFLLTSTSEVYG--DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
+ S+S VYG + + K+T +P+ S Y K++ E + Y +
Sbjct: 120 HLIYASSSSVYGLNNKVPFSTKDTV---DHPV---SLYAATKKSNELMAHSYSHLYNIPT 173
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
R F YG D + F + L + + + +G R F V D+VEG++R+
Sbjct: 174 TGLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIA 231
Query: 342 E 342
+
Sbjct: 232 D 232
Score = 79 (32.9 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 16/74 (21%), Positives = 39/74 (52%)
Query: 349 FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSL 408
+N+G+ ++++ + +++ + AK FR D ++ D + + PK+S+
Sbjct: 258 YNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISV 317
Query: 409 RKGLPKMV---KDF 419
++G+ ++V KDF
Sbjct: 318 KEGVAELVVWFKDF 331
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 199 (75.1 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 64/241 (26%), Positives = 112/241 (46%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHHFGNPNFELIRHD 172
++ +VTG AGF+GS +V+RL A G V+ +DN + K+ + + +F I+ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 173 VVEPLLL-------EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVGA 223
+ + ++ + D++ HLA A V Y NP+ +N++G LN+L G
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 224 RFLLTSTSEVYG--DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
+ S+S VYG + + K+T +P+ S Y K++ E + Y +
Sbjct: 120 HLIYASSSSVYGLNNKVPFSTKDTV---DHPV---SLYAATKKSNELMAHSYSHLYNIPT 173
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
R F YG D + F + L + + + +G R F V D+VEG++R+
Sbjct: 174 TGLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIA 231
Query: 342 E 342
+
Sbjct: 232 D 232
Score = 79 (32.9 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 16/74 (21%), Positives = 39/74 (52%)
Query: 349 FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSL 408
+N+G+ ++++ + +++ + AK FR D ++ D + + PK+S+
Sbjct: 258 YNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISV 317
Query: 409 RKGLPKMV---KDF 419
++G+ ++V KDF
Sbjct: 318 KEGVAELVVWFKDF 331
>UNIPROTKB|C9J3T9 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00915766 ProteinModelPortal:C9J3T9 SMR:C9J3T9 STRING:C9J3T9
Ensembl:ENST00000436241 ArrayExpress:C9J3T9 Bgee:C9J3T9
Uniprot:C9J3T9
Length = 52
Score = 222 (83.2 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 40/51 (78%), Positives = 44/51 (86%)
Query: 198 FNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWG 248
+NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP HPQ E YWG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWG 52
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 224 (83.9 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 89/325 (27%), Positives = 147/325 (45%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
+R ++TG AGFVG +L + L + V+ F T R PN E+I D+
Sbjct: 1 MRALITGVAGFVGKYLANHLTEQN-----VEVFGTSRNNEAKL----PNVEMISLDIMDS 51
Query: 174 --VEPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK--RVGARFLL 227
V+ ++ ++ D I+HLA +S N T TNV GTL++L + + R L
Sbjct: 52 QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT 111
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
+SE YG L P+ E+ N + S Y K + L Y + G+++ R F
Sbjct: 112 IGSSEEYGMIL--PE-ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTF 168
Query: 288 NTYGPRMCIDDGRVVSNFVAQAL-----RKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
N GP + G V +F Q + ++EP+ G+ + R F V D+V+ L +
Sbjct: 169 NHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQ 226
Query: 343 GEHVGP-FNLGNPGEFTMLELAQVVQETID-PNAKIEFRPNTEDDPHKRKPDI----SRA 396
G +N+ + G T ++ V+ + N KI+ N P + R
Sbjct: 227 YGKTGDVYNVCS-GIGTRIQ--DVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRL 283
Query: 397 KELLGWEPKVSLRKGLPKMVKDFRQ 421
K+ GW+P++ L K L ++++ +RQ
Sbjct: 284 KDSTGWKPRIPLEKSLFEILQSYRQ 308
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 225 (84.3 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 87/327 (26%), Positives = 146/327 (44%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH-DVVE 175
+++ +TG G +GSHL + L+A G V T ++ F ++ V +
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQ--FNGAEVDITDWCSVYD 58
Query: 176 PLL-LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSE 232
+ D ++HLA + P PV+T+ TN+VGT + +RV A+ ++ +S
Sbjct: 59 SIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKIIVAGSSA 118
Query: 233 VYG--DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
YG DP + P E + P+ Y K + L YH+ G+ +ARIFN
Sbjct: 119 EYGFVDPSEVPINERR--ELRPLHP---YGVSKAATDMLAYQYHKSYGMHTVVARIFNCT 173
Query: 291 GPRMCIDDGRVVSNFVAQA--LRKEP----LTVYGDGKQTRSFQFVSDLVEGLMRLME-G 343
GPR G +S+FV + L P + V G+ K R+ V DL LM +++ G
Sbjct: 174 GPRKV---GDALSDFVRRCTWLEHHPEQSAIRV-GNLKTKRTIVDVRDLNRALMLMLDKG 229
Query: 344 EHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKP--------DISR 395
E +N+G G E+ V+++ I + + P E DP +P D S+
Sbjct: 230 EAGADYNVG--GSIAY-EMGDVLKQVIAACKRDDIVP--EVDPALLRPTDEKIIYGDCSK 284
Query: 396 AKELLGWEPKVSLRKGLPKMVKDFRQR 422
+ GW+ ++ L + + M +R +
Sbjct: 285 LAAITGWQQEICLTQTIADMFDYWRSK 311
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 228 (85.3 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 81/323 (25%), Positives = 143/323 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSV--IVVDNFFTGRKE-NVMHHFG-NPNFELIRHDVV 174
+++TGG GF+GS+ ++ + + I D G +V +P ++ + +
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESPRYKFVEAALE 70
Query: 175 E-PLLL------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGL---AKRVGAR 224
+ P L+ EVD + H A + + TI+ N++ T +L + G +
Sbjct: 71 DQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKGVK 130
Query: 225 FLL-TSTSEVYGDPLQHPQKETYWGNV-NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
L+ ST EVYGD + ++ ++ NP Y K E + Y +
Sbjct: 131 KLVHISTDEVYGDSFEDTTPKSESASLPNPTNP---YAASKAACEMVIRSYWHSYKLPYV 187
Query: 283 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRL-M 341
+ R+ N YGPR +++ F AL +P + GDG TRS+ +V D E + R+ +
Sbjct: 188 MVRMNNVYGPRQI--HTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVAL 245
Query: 342 EGEHVGPFNLGNPGEFTMLELAQVVQETI------DPNAKIEFRPNTEDDPHKRKP--DI 393
EG +N+G E T +EL +++ T+ +P A F P + H R+ D
Sbjct: 246 EGTLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPT-FAPIPDRPYHDRRYYIDF 304
Query: 394 SRAKELLGWEPKVSLRKGLPKMV 416
S+ + +GW+ +GL K +
Sbjct: 305 SKIRNAMGWQCTTPFSEGLMKTI 327
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 226 (84.6 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 86/312 (27%), Positives = 141/312 (45%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-EPL 177
I+VTGGAG++GSH+V +L + + V+VVDN G K+ V + +LI D E L
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAV-----DTRAKLIVGDFGDENL 56
Query: 178 LLEVDQIY------HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTST 230
LLE+ + Y H+A + P K + N+ TL++L + + + + +ST
Sbjct: 57 LLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSST 116
Query: 231 SEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
+ VYG+P + P E + P + Y K E Y + G R FN
Sbjct: 117 AAVYGEPEKWPITEDF-----PQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAA 171
Query: 291 G--PRMCI-DDGRVVSNFVAQALR-----KEPLTVYG------DGKQTRSFQFVSDLVEG 336
G P I +D ++ + + +E LTV+G DG R + V+DL E
Sbjct: 172 GADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAEA 231
Query: 337 -LMRL--MEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDI 393
++ L + + G +NLGN F++ E+ +V +E K+ + DP
Sbjct: 232 HILALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLVASS 291
Query: 394 SRAKELLGWEPK 405
+ ++ L + PK
Sbjct: 292 EKIQKELNFTPK 303
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 216 (81.1 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 72/278 (25%), Positives = 125/278 (44%)
Query: 109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFEL 168
P R+ R+++ G GF+G+HL +RL+ R D V G + + +P+F
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLL-REDHYEVY-GLDIG-SDAISRFLNHPHFHF 364
Query: 169 IRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
+ D+ +E + + D + L A+P+ Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGN--VNPIGV-RSCYDEGKRTAETLTMDYHRGAGV 279
R + STSEVYG E + N V P+ R Y K+ + + Y G+
Sbjct: 425 KRIIFPSTSEVYGMCSDKYFDEDH-SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGL 483
Query: 280 EVRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
+ + R FN GPR+ I R ++ + + P+ + GKQ R F + D
Sbjct: 484 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 543
Query: 334 VEGLMRLME--GEHV-GPF-NLGNP-GEFTMLELAQVV 366
+E L R++E G G N+GNP E ++ EL +++
Sbjct: 544 IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEML 581
Score = 66 (28.3 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 385 DPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDF 419
D RKP I A L WEPK+ +++ + + + DF
Sbjct: 615 DVEHRKPSIRNAHRCLDWEPKIDMQETIDETL-DF 648
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 226 (84.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 76/283 (26%), Positives = 130/283 (45%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-----------HFGNPNFEL 168
++TG AGF+GS+L+++L+ +VI +DNF TGR+ N+ F N ++
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 169 IRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
+ + E ++ VD + H A S +P+ T N+ G LNML AK + F
Sbjct: 79 RDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTY 138
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
++S YGD P+ E GN P+ S Y K E Y R G E R F
Sbjct: 139 AASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIGLRYF 193
Query: 288 NTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG--LMRLMEG 343
N +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+ L
Sbjct: 194 NVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAATAAS 253
Query: 344 EHVGP-FNLGNPGEFTMLELAQVVQETIDPNA-KIEFRPNTED 384
E +N+ T+ +L ++++++ N + PN D
Sbjct: 254 EAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRD 296
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 64/268 (23%), Positives = 119/268 (44%)
Query: 165 NFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
N ++ + + E ++ VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 225 -FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
F ++S YGD P+ E GN P+ S Y K E Y R G E
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIG 189
Query: 284 ARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG--LMR 339
R FN +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+ L
Sbjct: 190 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAA 249
Query: 340 LMEGEHVGP-FNLGNPGEFTMLELAQVVQETIDPNA-KIEFRPNTED----DPHKRKPDI 393
E +N+ T+ +L ++++++ N + PN D D + D+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADV 309
Query: 394 SRAKELLGWEPKVSLRKGLPKMVKDFRQ 421
S+A LG++ + +G+ + + +++
Sbjct: 310 SKAVTRLGYQYTHKILEGISEAMPWYKE 337
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 226 (84.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 76/283 (26%), Positives = 130/283 (45%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-----------HFGNPNFEL 168
++TG AGF+GS+L+++L+ +VI +DNF TGR+ N+ F N ++
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 169 IRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
+ + E ++ VD + H A S +P+ T N+ G LNML AK + F
Sbjct: 79 RDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTY 138
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
++S YGD P+ E GN P+ S Y K E Y R G E R F
Sbjct: 139 AASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIGLRYF 193
Query: 288 NTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG--LMRLMEG 343
N +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+ L
Sbjct: 194 NVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAATAAS 253
Query: 344 EHVGP-FNLGNPGEFTMLELAQVVQETIDPNA-KIEFRPNTED 384
E +N+ T+ +L ++++++ N + PN D
Sbjct: 254 EAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRD 296
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 64/268 (23%), Positives = 119/268 (44%)
Query: 165 NFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
N ++ + + E ++ VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 225 -FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
F ++S YGD P+ E GN P+ S Y K E Y R G E
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIG 189
Query: 284 ARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG--LMR 339
R FN +G R + V+ + + ++ E + + GDG+ +R F ++ ++V+ L
Sbjct: 190 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAA 249
Query: 340 LMEGEHVGP-FNLGNPGEFTMLELAQVVQETIDPNA-KIEFRPNTED----DPHKRKPDI 393
E +N+ T+ +L ++++++ N + PN D D + D+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADV 309
Query: 394 SRAKELLGWEPKVSLRKGLPKMVKDFRQ 421
S+A LG++ + +G+ + + +++
Sbjct: 310 SKAVTRLGYQYTHKILEGISEAMPWYKE 337
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 223 (83.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 83/312 (26%), Positives = 140/312 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV--IVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
RIVV+GGAGF+G H + ++ + + +D + + + NFE + D+
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67
Query: 175 EPL--LLEVDQ----IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLG---LAKRVGAR 224
+ L LL++ + I + A +S V F +PV K N++ T N+L L +G
Sbjct: 68 DNLEYLLKITKNTTDIINFAAESS-VDRSFKDPVYFTKNNILATQNLLECHRLNPSIGY- 125
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
FL ST EVYGD + KE +NP Y K + + Y + + I
Sbjct: 126 FLHISTDEVYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPITIL 180
Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE 344
R N YGP + +++ + K+P+ V+G G R + +V D+V + +
Sbjct: 181 RPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKN 238
Query: 345 HVGP----FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
+ +N+G E L L +++ E I +I+F + + D ++ L
Sbjct: 239 PMTTVNQIYNIGGTDELDNLSLIKLIME-IFGRGEIQFIKDRNYNDTNYSIDTTKIHNL- 296
Query: 401 GWEPKVSLRKGL 412
GW PK+SL +GL
Sbjct: 297 GWSPKISLVQGL 308
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 223 (83.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 83/312 (26%), Positives = 140/312 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV--IVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
RIVV+GGAGF+G H + ++ + + +D + + + NFE + D+
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67
Query: 175 EPL--LLEVDQ----IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLG---LAKRVGAR 224
+ L LL++ + I + A +S V F +PV K N++ T N+L L +G
Sbjct: 68 DNLEYLLKITKNTTDIINFAAESS-VDRSFKDPVYFTKNNILATQNLLECHRLNPSIGY- 125
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
FL ST EVYGD + KE +NP Y K + + Y + + I
Sbjct: 126 FLHISTDEVYGDVYEGDNKEN--AVMNPTNP---YSASKAAIDLIIKSYQYSYKLPITIL 180
Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE 344
R N YGP + +++ + K+P+ V+G G R + +V D+V + +
Sbjct: 181 RPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKN 238
Query: 345 HVGP----FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
+ +N+G E L L +++ E I +I+F + + D ++ L
Sbjct: 239 PMTTVNQIYNIGGTDELDNLSLIKLIME-IFGRGEIQFIKDRNYNDTNYSIDTTKIHNL- 296
Query: 401 GWEPKVSLRKGL 412
GW PK+SL +GL
Sbjct: 297 GWSPKISLVQGL 308
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 216 (81.1 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 85/320 (26%), Positives = 148/320 (46%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--VE 175
RI+VTGGAG+VGS LV +L+ G V V D F G ++ + NP ++ D+ E
Sbjct: 7 RILVTGGAGYVGSALVPQLLELGYRVTVYDTLFFG--DDFLPK-ENPYLNIVEGDIRDTE 63
Query: 176 PL---LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
L + D + LAC ++ ++ + + N+ M+ AK G RF+ S+S
Sbjct: 64 RLKQCFKDADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASSS 123
Query: 232 EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG--AGVEVRIARIFNT 289
VYG + + T +P+ + Y++ K E L + V +R A +
Sbjct: 124 SVYG--VSETKDVT---EEHPLVPLTLYNKYKGMCEPLLFKHQSPEFVCVTIRPATLCG- 177
Query: 290 YGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE--GLMRLMEGEHV 346
Y PR +D +++N A+ +TV+G G Q R V D+ + L+ ++ E +
Sbjct: 178 YAPRQRLDLSVNILTN---HAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDEKI 233
Query: 347 G--PFNLGNPGEFTMLELAQVVQETID---PN-AKIEFRPNTEDDPHKRKPDISRAKELL 400
FN+G + +++E+A +V+ ++ P A I+ DD + + K L
Sbjct: 234 AGETFNVGYENK-SIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRCL 292
Query: 401 GWEPKVSLRKGLPKMVKDFR 420
G+E K S+ + + K F+
Sbjct: 293 GFEAKYSIEDAVRDLCKAFK 312
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 139 (54.0 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 46/128 (35%), Positives = 68/128 (53%)
Query: 256 RSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMC----ID---DG--RVVSN 304
R Y K+ E L Y GA G+E I R FN GPRM ID +G RV++
Sbjct: 182 RWSYACAKQLIERLV--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
Query: 305 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG-EHVGP--FNLGNPG-EFTML 360
F LR+EPL + G+ R+F ++ D +E ++ ++E E FN+GNP E T+
Sbjct: 240 FSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVR 299
Query: 361 ELAQVVQE 368
+LA+++ E
Sbjct: 300 QLAEMMTE 307
Score = 125 (49.1 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 43/157 (27%), Positives = 69/157 (43%)
Query: 103 NSGGKIPL-GLKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----N 156
N ++ L G K + I + G GF+GSHL ++L+ V+ +D + K +
Sbjct: 3 NGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD 62
Query: 157 VMHHFGNPNFELI--RHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 213
+ G F I +HD +E L+ D +LA +P Y P+ TI +N + L
Sbjct: 63 TVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
Query: 214 MLGLAKRVGARFLLTSTSEVYGD------PLQHPQKE 244
++ R + ST EVYG P HP ++
Sbjct: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQ 159
Score = 95 (38.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 29/75 (38%), Positives = 39/75 (52%)
Query: 349 FNLGNPG-EFTMLELAQVVQE--------------TIDPNAKIEFRPNTEDDPHKRKPDI 393
FN+GNP E T+ +LA+++ E TID ++K EF DD KR PD+
Sbjct: 287 FNVGNPNNEVTVRQLAEMMTEVYAKVSGETAIESPTIDVSSK-EFYGEGYDDSDKRIPDM 345
Query: 394 SRAKELLGWEPKVSL 408
+ LGW PK SL
Sbjct: 346 TIINRQLGWNPKTSL 360
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 212 (79.7 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 72/240 (30%), Positives = 117/240 (48%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---FTGR-KENV---MHHFGNPNFELI 169
++I+VTG AGF+GS + RL+ G SV VD F + + KE+ + F + E I
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 170 RHDVVEPL--LLEVD---QIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA 223
R + E + + + D + H A A V Y + P I N+VG+ N++ L++R G
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAG-VRYSLDHPRDFIDANIVGSFNIIDLSRRHGT 119
Query: 224 RFL-LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
+ L + STS YG + P +E + P + + Y K +E + + GV
Sbjct: 120 QHLVMASTSSAYGANQKFPFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTT 175
Query: 283 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
+ R F+ YGP D + F + + +P+ V+ G R F ++ DLVE + RLM+
Sbjct: 176 VLRFFSVYGPWGRPDMAFFL--FTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMD 233
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 58/258 (22%), Positives = 103/258 (39%)
Query: 182 DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGARFL-LTSTSEVYGDPLQ 239
+ + H A A V Y + P I N+VG+ N++ L++R G + L + STS YG +
Sbjct: 78 EMVLHFAAQAG-VRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQHLVMASTSSAYGANQK 136
Query: 240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP----RMC 295
P +E + P + + Y K +E + + GV + R F+ YGP M
Sbjct: 137 FPFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTTVLRFFSVYGPWGRPDMA 192
Query: 296 -------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP 348
I G+ + F L ++ T D + + V G ++ G+ + P
Sbjct: 193 FFLFTDKIFKGQPIDVFNHGDLLRD-FTYIDDLVEAIRRLMDTPPVVG-NHIIRGDSLSP 250
Query: 349 F------NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGW 402
N+GN +++ + ++ I A+ D + D+ L G+
Sbjct: 251 VAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGDVKQTFADVRLLDALTGY 310
Query: 403 EPKVSLRKGLPKMVKDFR 420
P R G+ + V +R
Sbjct: 311 TPDTDYRTGIARFVDWYR 328
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 175 (66.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 67/240 (27%), Positives = 106/240 (44%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRK-ENVMHHFGNPNFELIRH 171
++ +VTG AGF+G+++ RL A G V+ +DN + K + NF I+
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 172 DVVE-----PLLLE--VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVG 222
D+ + L + ++ HLA A V Y NP+ +N+VG L +L G
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAG-VRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
+ S+S VYG + P T +PI S Y K+ E ++ Y +
Sbjct: 120 EHLVYASSSSVYGLNQKMPFS-TEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPTT 175
Query: 283 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
R F YGP D + F L E + VY G +R F ++ D+VEG++R+ +
Sbjct: 176 GLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQD 233
Score = 78 (32.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 349 FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSL 408
FN+GN +L+ ++ + AK +F P D H D + +G++ +V +
Sbjct: 259 FNIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDI 318
Query: 409 RKGLPKMVKDFR 420
G+ K V +R
Sbjct: 319 DTGVAKFVDWYR 330
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 175 (66.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 67/240 (27%), Positives = 106/240 (44%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRK-ENVMHHFGNPNFELIRH 171
++ +VTG AGF+G+++ RL A G V+ +DN + K + NF I+
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 172 DVVE-----PLLLE--VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML-GLAKRVG 222
D+ + L + ++ HLA A V Y NP+ +N+VG L +L G
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAG-VRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
+ S+S VYG + P T +PI S Y K+ E ++ Y +
Sbjct: 120 EHLVYASSSSVYGLNQKMPFS-TEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPTT 175
Query: 283 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
R F YGP D + F L E + VY G +R F ++ D+VEG++R+ +
Sbjct: 176 GLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQD 233
Score = 78 (32.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 349 FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSL 408
FN+GN +L+ ++ + AK +F P D H D + +G++ +V +
Sbjct: 259 FNIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDI 318
Query: 409 RKGLPKMVKDFR 420
G+ K V +R
Sbjct: 319 DTGVAKFVDWYR 330
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 203 (76.5 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 87/320 (27%), Positives = 148/320 (46%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
R+ VTG +GFVG HL L A ++ V H + +L+ D + L
Sbjct: 4 RLFVTGLSGFVGKHLQAYLAAAHTPWALLP---------VPHRY-----DLLEPDSLGDL 49
Query: 178 LLEV-DQIYHLACPAS-PVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEV 233
E+ D + HLA P ++ +P +T++ N++GTLN+L K G FL S+ +V
Sbjct: 50 WPELPDAVIHLAGQTYVPEAFR-DPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDV 108
Query: 234 YGDPLQH--PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
YG + P E + P R+ Y K AE+L + + G V +AR FN G
Sbjct: 109 YGQVAEAALPIHEELIPH--P---RNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIG 163
Query: 292 PRMCIDDGRVVSNFVAQALR-KEPLTV----YGDGKQTRSFQFVSDLVEGLMRLME-GEH 345
P D V+++ Q R K+ L GD +R F V D++ +RL+ GE
Sbjct: 164 PGQ--KDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGEA 221
Query: 346 VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAK--ELLGWE 403
+N+ + E + EL +++ + +I P +R+ S A+ + GW+
Sbjct: 222 GAVYNVCSGQEQKIRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSHARLHDTTGWK 281
Query: 404 PKVSLRKGLPKMVKDFRQRI 423
P++++++ L ++ D+ R+
Sbjct: 282 PEITIKQSLRAILSDWESRV 301
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 140 (54.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 49/189 (25%), Positives = 80/189 (42%)
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
+QH + P S Y K +++ L + R G + N YGP +
Sbjct: 165 IQHSTLPLFT-ETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPE 223
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP-FNLGNPGE 356
+++ + AL +PL +YG G Q R + +V D L +++ VG +N+G E
Sbjct: 224 --KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNE 281
Query: 357 FTMLELAQVVQETID---P-NAKI-EFRPNTEDDP-HKRKP--DISRAKELLGWEPKVSL 408
LE+ Q + +D P N E D P H R+ D ++ L W+P+ +
Sbjct: 282 KRNLEVVQTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETF 341
Query: 409 RKGLPKMVK 417
GL K V+
Sbjct: 342 ETGLRKTVE 350
Score = 115 (45.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
++I+VTGGAGF+GS +V +I D V+ VD + G E++ +P + + D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRYTFEKVDIC 60
Query: 175 EPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 219
+ LE D + HLA + I+TN+VGT +L A+
Sbjct: 61 DRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
Score = 73 (30.8 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 27/76 (35%), Positives = 35/76 (46%)
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK---------RVGA-RFLL 227
L + D + HLA + I+TN+VGT +L A+ R A RF
Sbjct: 71 LHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNTERKSAFRFHH 130
Query: 228 TSTSEVYGDPLQHPQK 243
ST EVYGD L HP +
Sbjct: 131 ISTDEVYGD-LPHPDE 145
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 201 (75.8 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 84/310 (27%), Positives = 129/310 (41%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
++VTGGAG++GSH+V +L G +V+V DN TG + ++H +L ++ L
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHGERLVTGDLSDTARLDALF 62
Query: 179 LEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 235
+E + H A P+K N TLN+LG + G RF+ +ST+ VYG
Sbjct: 63 VEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSSTAAVYG 122
Query: 236 DPLQH-PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG--P 292
P +E+ +NP G K +E + D G+ R FN G P
Sbjct: 123 IPDSGVAAEESATVPINPYGT------SKLMSEWMLRDVCAAHGMRSVALRYFNVAGADP 176
Query: 293 RMCIDDGRV-------VSNFVAQALRKEPLTVYG------DGKQTRSFQFVSDLVEG--- 336
+ + VS A LR + + ++G DG R + V DL
Sbjct: 177 QARMGQRTPEATHLIKVSCQAALGLR-DKVCIFGTDYPTPDGTGIRDYIHVEDLASAHLA 235
Query: 337 -LMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISR 395
L L +G N+G ++ E+ +V+ + E P DP R
Sbjct: 236 ALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRRPGDPPSLVARADR 295
Query: 396 AKELLGWEPK 405
A+ LLGW P+
Sbjct: 296 ARTLLGWTPR 305
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 199 (75.1 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 68/261 (26%), Positives = 119/261 (45%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVV 174
+R++VTGG+G++GSH +L+ G VI++DN ++ V+ G + + D+
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 175 -EPLLLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
E L+ E+ D + H A + P++ NV GTL ++ + + F+
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
+S++ VYGD + P E++ P G +S Y + K E + D + + +
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLVE 335
R FN G D G + +N ++AQ R++ L ++G+ T V D +
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 336 GLMRLMEGEHVGPFNLGN-PG 355
+M L +G V L N PG
Sbjct: 236 -VMDLADGHVVAMEKLANKPG 255
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 198 (74.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 79/313 (25%), Positives = 137/313 (43%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--VEP 176
++VTG G++GS LV +L+ +G V VD F+ G + + H P+ ELI DV ++P
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVDRFYFG-SDKLSQH---PHLELINEDVRRLQP 61
Query: 177 -LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 234
L VD + LA ++ T + N + LAK+ R++L S+ +Y
Sbjct: 62 SLFTNVDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRYILPSSCSIY 121
Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
G + ET NP+ + +E K E L + +R A ++ Y PRM
Sbjct: 122 GFQ-KGAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG-YSPRM 176
Query: 295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG---EHVGPF-N 350
D ++ V A + + + DG Q R V D + ++ L++ E G N
Sbjct: 177 RFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEINGQIIN 234
Query: 351 LG-NPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDIS--RAKELLGWEPKVS 407
+G + + L Q++ E + + DP R +S + K +L W+P+
Sbjct: 235 VGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNWQPQWD 294
Query: 408 LRKGLPKMVKDFR 420
KG ++++ +
Sbjct: 295 AAKGAVELIEKLK 307
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 198 (74.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 79/313 (25%), Positives = 137/313 (43%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--VEP 176
++VTG G++GS LV +L+ +G V VD F+ G + + H P+ ELI DV ++P
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVDRFYFG-SDKLSQH---PHLELINEDVRRLQP 61
Query: 177 -LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 234
L VD + LA ++ T + N + LAK+ R++L S+ +Y
Sbjct: 62 SLFTNVDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAKQQKVKRYILPSSCSIY 121
Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
G + ET NP+ + +E K E L + +R A ++ Y PRM
Sbjct: 122 GFQ-KGAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG-YSPRM 176
Query: 295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG---EHVGPF-N 350
D ++ V A + + + DG Q R V D + ++ L++ E G N
Sbjct: 177 RFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEINGQIIN 234
Query: 351 LG-NPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDIS--RAKELLGWEPKVS 407
+G + + L Q++ E + + DP R +S + K +L W+P+
Sbjct: 235 VGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNWQPQWD 294
Query: 408 LRKGLPKMVKDFR 420
KG ++++ +
Sbjct: 295 AAKGAVELIEKLK 307
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 197 (74.4 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 68/234 (29%), Positives = 103/234 (44%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNP---NFELIRHDV 173
++TG AGF+GS+L++ L+ V+ +DNF TG + N V NF ++ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 174 -----VEPLLLE----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
+ L VD I H A S +P+ T N+ G L ML AK +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 225 -FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
F+ ++S YGD P+ E G P+ S Y K E +H+ G+
Sbjct: 139 SFVYAASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTG 193
Query: 284 ARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE 335
R FN +G R D V+ + + E L + GDG+ +R F FV + V+
Sbjct: 194 LRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQ 247
Score = 195 (73.7 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 68/246 (27%), Positives = 109/246 (44%)
Query: 181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQ 239
VD I H A S +P+ T N+ G L ML AK + F+ ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG 299
P+ E G P+ S Y K E +H+ G+ R FN +G R D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 300 --RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNP--G 355
V+ + + E L + GDG+ +R F FV + V+ + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 356 EFTMLE-LAQVVQETIDPNAKIEFR--PNTED----DPHKRKPDISRAKELLGWEPKVSL 408
+ T L L ++ + N ++++ P +D D + DIS+AK L+G+EP+ +
Sbjct: 270 DRTSLNTLFNSLKVALQANG-VDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKI 328
Query: 409 RKGLPK 414
++G+ K
Sbjct: 329 QQGIDK 334
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 197 (74.4 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 68/234 (29%), Positives = 103/234 (44%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNP---NFELIRHDV 173
++TG AGF+GS+L++ L+ V+ +DNF TG + N V NF ++ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 174 -----VEPLLLE----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
+ L VD I H A S +P+ T N+ G L ML AK +
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVK 138
Query: 225 -FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
F+ ++S YGD P+ E G P+ S Y K E +H+ G+
Sbjct: 139 SFVYAASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTG 193
Query: 284 ARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE 335
R FN +G R D V+ + + E L + GDG+ +R F FV + V+
Sbjct: 194 LRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQ 247
Score = 195 (73.7 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 68/246 (27%), Positives = 109/246 (44%)
Query: 181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQ 239
VD I H A S +P+ T N+ G L ML AK + F+ ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG 299
P+ E G P+ S Y K E +H+ G+ R FN +G R D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 300 --RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNP--G 355
V+ + + E L + GDG+ +R F FV + V+ + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 356 EFTMLE-LAQVVQETIDPNAKIEFR--PNTED----DPHKRKPDISRAKELLGWEPKVSL 408
+ T L L ++ + N ++++ P +D D + DIS+AK L+G+EP+ +
Sbjct: 270 DRTSLNTLFNSLKVALQANG-VDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKI 328
Query: 409 RKGLPK 414
++G+ K
Sbjct: 329 QQGIDK 334
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 194 (73.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 73/262 (27%), Positives = 114/262 (43%)
Query: 182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR----VGA------RFLLTSTS 231
D + HLA + P I+TN+VGT +L +A++ +G RF ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134
Query: 232 EVYGDPLQHPQK-ET-----YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
EVYGD L HP + E + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTN 193
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-MRLMEGE 344
N YGP + +++ + AL +PL +YG G Q R + +V D L M + EG+
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK 251
Query: 345 HVGPFNLGNPGEFTMLELAQVVQETID---PNAKIEFRPN---TEDDP-HKRKPDISRAK 397
+N+G E L++ + + +D P A +R D P H R+ I K
Sbjct: 252 AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYREQITYVADRPGHDRRYAIDAGK 310
Query: 398 --ELLGWEPKVSLRKGLPKMVK 417
LGW+P + G+ K V+
Sbjct: 311 ISRELGWKPLETFESGIRKTVE 332
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 192 (72.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 71/264 (26%), Positives = 116/264 (43%)
Query: 180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML--------GL--AKRVGARFLLTS 229
++D + HLA + P I+TN+VGT +L GL K+ RF S
Sbjct: 73 QLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHIS 132
Query: 230 TSEVYGDPLQHPQK----ETY--WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
T EVYGD L HP + ET + S Y K +++ L + R G+ +
Sbjct: 133 TDEVYGD-LPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIV 191
Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM-E 342
+ N YGP + +++ + AL + L +YG G Q R + +V D L ++ E
Sbjct: 192 SNCSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTE 249
Query: 343 GEHVGPFNLGNPGEFTMLELAQVVQETID---PNAKIEFRPN---TEDDP-HKRKP--DI 393
G+ +N+G E +++ + + +D P K +R D P H R+ D
Sbjct: 250 GKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEK-SYREQITYVADRPGHDRRYAIDA 308
Query: 394 SRAKELLGWEPKVSLRKGLPKMVK 417
+ LGW+P+ + G+ K V+
Sbjct: 309 DKISRELGWKPQETFESGIRKTVE 332
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 90/314 (28%), Positives = 141/314 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMHHFGNPNFELIRH-- 171
R ++TG G GS+L + L+A+G V ++ F T R +++ P L H
Sbjct: 3 RALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYG 62
Query: 172 DVVE-----PLL--LEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAK--RV 221
D+++ LL +E D++Y+LA S V F+ PV T T +G++ +L + RV
Sbjct: 63 DLIDGTRLVTLLSTIEPDEVYNLAAQ-SHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 222 GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
RF S+SE++G PQ E + P RS Y K + T +Y G+
Sbjct: 122 HCRFYQASSSEMFGAS-PPPQNE-----LTPFYPRSPYGAAKVYSYWATRNYREAYGLFA 175
Query: 282 RIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTVY-GDGKQTRSFQFVSDLVEGLMR 339
+FN PR R ++ VA+ VY G+ R + + + VEG+ R
Sbjct: 176 VNGILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWR 235
Query: 340 LMEGEHVGPFNLGNPGEFTMLELAQVVQET--IDPNAKIEF-----RPNTEDDPHKRKPD 392
+++ + F L FT+ E A+ E +D ++F RP TE D D
Sbjct: 236 MLQTDEPDDFVLATGRGFTVREFARAAFEHAGLDWQQYVKFDQRYLRP-TEVD--SLIGD 292
Query: 393 ISRAKELLGWEPKV 406
++A ELLGW V
Sbjct: 293 ATKAAELLGWRASV 306
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 143 (55.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 63/207 (30%), Positives = 97/207 (46%)
Query: 181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH 240
+D IY A PV K+ + T + G K +G+ L + DP +
Sbjct: 110 LDTIYSNFIDALPV-VKYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDHPLRDDPAFY 164
Query: 241 PQKETY----WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRM 294
KE +G++ R Y K+ E L Y GA G+E I R FN GPRM
Sbjct: 165 VLKEDISPCIFGSIEK--QRWSYACAKQLIERLV--YAEGAENGLEFTIVRPFNWIGPRM 220
Query: 295 C----ID---DG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG-E 344
ID +G RV++ F LR+EPL + G+ R+F +++D +E ++ ++E E
Sbjct: 221 DFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPE 280
Query: 345 HVGP--FNLGNPG-EFTMLELAQVVQE 368
FN+GNP E T+ +LA+++ E
Sbjct: 281 RANGHIFNVGNPNNEVTVRQLAEMMTE 307
Score = 130 (50.8 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 103 NSGGKIPL-GLKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----N 156
N ++ L G + L I + G GF+GSHL ++L+ V+ +D + K +
Sbjct: 3 NGANRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPD 62
Query: 157 VMHHFGNPNFELI--RHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 213
+ G F I +HD +E L+ D I +LA +P Y P+ TI +N + L
Sbjct: 63 TVEWSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALP 122
Query: 214 MLGLAKRVGARFLLTSTSEVYGD------PLQHPQKE 244
++ R + ST EVYG P HP ++
Sbjct: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRD 159
Score = 94 (38.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 349 FNLGNPG-EFTMLELAQVVQE--------------TIDPNAKIEFRPNTEDDPHKRKPDI 393
FN+GNP E T+ +LA+++ E T+D ++K EF DD KR PD+
Sbjct: 287 FNVGNPNNEVTVRQLAEMMTEVYAKVSGEGAIESPTVDVSSK-EFYGEGYDDSDKRIPDM 345
Query: 394 SRAKELLGWEPKVSL 408
+ LGW PK SL
Sbjct: 346 TIINRQLGWNPKTSL 360
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 172 (65.6 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 76/269 (28%), Positives = 123/269 (45%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKENVMHHFGNPNFELIRH-- 171
R ++TG +G GS+L + L+ +G V V +F TGR +++ P+ L H
Sbjct: 3 RALITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYG 62
Query: 172 DV-----VEPLLLEV--DQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVG- 222
D+ + +L EV D+IY+L S V F+ P T + + +GT+ +L + G
Sbjct: 63 DLNDASSINRVLREVRPDEIYNLGAQ-SHVRVSFDVPEYTGEIDALGTVRLLEGIRETGL 121
Query: 223 -ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
RF S+SE+YG ++ PQKET P RS Y K A +T++Y G+
Sbjct: 122 NTRFYQASSSELYGKVVETPQKET-----TPFYPRSPYACAKAYAYYITVNYRESYGMYA 176
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALR-KEPLT--VY-GDGKQTRSFQFVSDLVEGL 337
+FN PR + V A R K L +Y G+ R + F D VE +
Sbjct: 177 CNGILFNHESPRR--GETFVTRKITRAAGRIKTGLQDRLYLGNLDAKRDWGFAGDYVEAM 234
Query: 338 MRLMEGEHVGPFNLGNPGEFTMLELAQVV 366
+++ + F + +++ E A+ V
Sbjct: 235 WLMLQQQEADDFVVATGETWSVREFAERV 263
Score = 58 (25.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 364 QVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKD 418
++V E IDP FRP E D P ++A+ LGW+P+V + GL M+ D
Sbjct: 289 KIVIE-IDPRY---FRP-AEVDLLLGDP--AKARRQLGWQPRVDFQ-GLVDMMTD 335
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 189 (71.6 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 73/287 (25%), Positives = 122/287 (42%)
Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
+I++TGGAGF+GS LV +I D+V+VVD + G ++ + F + D+ +
Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 176 PLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
L + D + HLA + P I+TN+VGT +L A+
Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 229 STS-----EVYGDPLQHPQKET--YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
S + D + T ++ P S Y K +++ L + R G+
Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPT 182
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
I N YGP + +++ + AL + L VYG+G+Q R + +V D L +
Sbjct: 183 LITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVA 240
Query: 342 EGEHVGP-FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPH 387
VG +N+G E L++ + + E ++ E PN PH
Sbjct: 241 TTGKVGETYNIGGHNERKNLDVVETICELLE-----ELAPNK---PH 279
Score = 161 (61.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 58/218 (26%), Positives = 94/218 (43%)
Query: 213 NMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD 272
N L K+ RF ST EVYGD H + ++ P S Y K +++ L
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGD--LH-STDDFFTETTPYAPSSPYSASKASSDHLVRA 173
Query: 273 YHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
+ R G+ I N YGP + +++ + AL + L VYG+G+Q R + +V D
Sbjct: 174 WLRTYGLPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVED 231
Query: 333 LVEGLMRLMEGEHVGP-FNLGNPGEFTMLELAQVVQETID------PNAKIEFRPN---T 382
L + VG +N+G E L++ + + E ++ P+ +R
Sbjct: 232 HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFV 291
Query: 383 EDDP-HKRKP--DISRAKELLGWEPKVSLRKGLPKMVK 417
D P H + D S+ LGW P+ + G+ K V+
Sbjct: 292 ADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQ 329
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 191 (72.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 71/252 (28%), Positives = 114/252 (45%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT----GRKENVMHHFGNPNFELIRH 171
G+ ++VTG GFVGSH+ L RGD V+ +DNF K + ++
Sbjct: 87 GISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEG 146
Query: 172 DVVEPLLL----EV---DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ + LL +V + HLA A V Y NP + +N+ G +N+L + K
Sbjct: 147 DLNDAKLLAKLFDVVAFTHVMHLAAQAG-VRYALENPQSYVHSNIAGLVNLLEICKAANP 205
Query: 224 R--FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
+ + S+S VYG + P E+ + P S Y K+ E +T Y+ G+ +
Sbjct: 206 QPAIVWASSSSVYGLNEKVPFSESDRTD-QPA---SLYAATKKAGEEITHTYNHIYGLAI 261
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ----TRSFQFVSDLVEGL 337
R F YGP D +F L+ +P+T+Y GK R F ++ D+V+G
Sbjct: 262 TGLRFFTVYGPWGRPD--MAYFSFTRNILQGKPITIYR-GKNRVDLARDFTYIDDIVKGC 318
Query: 338 MRLME--GEHVG 347
+ ++ G+ G
Sbjct: 319 LGSLDSSGKSTG 330
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 68/256 (26%), Positives = 108/256 (42%)
Query: 184 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 240
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 166 VMHLAAQAG-VRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKV 224
Query: 241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR 300
P E+ + P S Y K+ E +T Y+ G+ + R F YGP D
Sbjct: 225 PFSESDRTD-QPA---SLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAY 280
Query: 301 V-VSNFVAQALRKEPLTVYGDGKQ--TRSFQFVSDLVEGLMRLME--GEHVG-------- 347
+ + Q K G + R F ++ D+V+G + ++ G+ G
Sbjct: 281 FSFTRNILQG--KPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGA 338
Query: 348 -P---FNLGNPGEFTMLELAQVVQETIDPNAKIEF--RPNTEDDPHKRKPDISRAKELLG 401
P FNLGN T+ L ++++ + AK F P D P +IS A+ G
Sbjct: 339 APYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGDVPFTHA-NISSARNEFG 397
Query: 402 WEPKVSLRKGLPKMVK 417
++P L GL K V+
Sbjct: 398 YKPTTDLETGLKKFVR 413
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 187 (70.9 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 77/325 (23%), Positives = 151/325 (46%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---FTGRKENVMH--HFGNP-NF--EL 168
+R+ +TGGAGF+GS L L + + ++++D T N+ HF N F EL
Sbjct: 1 MRVAITGGAGFIGSQLALNLQEKHE-ILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL 59
Query: 169 IRHDVV-EPLLLEVDQ-----IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+ E +L +++ I+H A + F+ K ++TN+ + + L+ +
Sbjct: 60 FAGDINDEKVLKKIEDFKPEIIFHQAAISDTT--VFDQTKVLQTNLNTFKDFIELSIDLN 117
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
A+ + S++ VYGD + PQ T + P ++ Y K + L Y+ A + V
Sbjct: 118 AKLIYASSASVYGDA-KSPQ--TVGKDEEP---KNPYAFSKLMMDKLAKKYYDKAHL-VG 170
Query: 283 IARIFNTYGPRMCIDD--GRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVEGLMR 339
+ R FN YG + +V F Q L K P G + R F ++ D++ +
Sbjct: 171 L-RYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVINANLI 229
Query: 340 LMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKEL 399
++ + G +N+G+ T ++ ++Q+ + + E+ PN ++ + ++ +
Sbjct: 230 ALDSK-CGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTE-AKLDQT 287
Query: 400 LGWEPKVSLRKGLPKMVKDFRQRIF 424
++PK SL +G+ + + + R+F
Sbjct: 288 WDYQPKFSLEEGIKDYLDEIK-RLF 311
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 185 (70.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 76/284 (26%), Positives = 133/284 (46%)
Query: 154 KEN--VMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFN-PVKTIKTNVVG 210
KEN + H+G+ L+ + ++ + + ++Y+LA S V F+ PV T++T +G
Sbjct: 53 KENARLFLHYGDITDGLVLNKLIHEI--KPHEVYNLAAQ-SHVRVSFDIPVYTMETIGLG 109
Query: 211 TLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA 266
TLN+L K RF S+SE+YGD PQ E+ P RS Y K A
Sbjct: 110 TLNILEAIKNADNAKEIRFYQASSSEMYGDVKSVPQTES-----TPFNPRSPYACAKVFA 164
Query: 267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTVY-GDGKQT 324
T++Y G+ +FN PR R +++ +A+ L +Y G+ +
Sbjct: 165 HYQTINYRESYGLHASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAK 224
Query: 325 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAK----IE--- 377
R + + D VE + +++ + + + +++ EL + ++ N + I+
Sbjct: 225 RDWGYAKDYVEAMWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNLNWRDFVVIDPKY 284
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK-DFR 420
+RP E D +P +AKE LGW+P S K + M++ DF+
Sbjct: 285 YRP-AEVDLLLGEP--KKAKEKLGWQPNTSFHKLIKIMLEHDFK 325
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 72/278 (25%), Positives = 117/278 (42%)
Query: 182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----------KRVGARFLLTSTS 231
D + HLA + P I+TN+VGT +L A K+ RF ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTD 134
Query: 232 EVYGDPLQHPQKET------YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
EVYGD L HP + + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTN 193
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM-EGE 344
N YGP + +++ + AL + L +YG G Q R + +V D L ++ EG+
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGK 251
Query: 345 HVGPFNLGNPGEFTMLELAQVVQETID---PNAKIEFRPN---TEDDP-HKRKPDISRAK 397
+N+G E +++ + + +D P K +R D P H R+ I K
Sbjct: 252 AGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEK-SYREQITYVADRPGHDRRYAIDAEK 310
Query: 398 --ELLGWEPKVSLRKGLPKMVKDFRQRI-FGDHKEGGA 432
LGW+P+ + G+ K V+ + + D+ + GA
Sbjct: 311 IGRALGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGA 348
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
++I+VTGGAGF+GS +V +I DSV+ VD + G +E++ + + D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADIC 60
Query: 175 E-PLLLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 219
+ P + + D + HLA + P I+TN+VGT +L A+
Sbjct: 61 DAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 68/262 (25%), Positives = 110/262 (41%)
Query: 182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----------KRVGARFLLTSTS 231
D + HLA + P I+TN+VGT +L A K+ RF ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHISTD 134
Query: 232 EVYGDPLQHPQKET------YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
EVYGD L HP + + S Y K +++ L + R G+ +
Sbjct: 135 EVYGD-LPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTN 193
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM-EGE 344
N YGP + +++ + AL + L +YG G Q R + +V D L ++ EG+
Sbjct: 194 CSNNYGPYHFPE--KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGK 251
Query: 345 HVGPFNLGNPGEFTMLELAQVVQETID---PNAKIEFRPN---TEDDP-HKRKP--DISR 395
+N+G E +++ + + +D P K +R D P H R+ D +
Sbjct: 252 AGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEK-SYREQITYVADRPGHDRRYAIDADK 310
Query: 396 AKELLGWEPKVSLRKGLPKMVK 417
LGW+P+ + G+ K V+
Sbjct: 311 ISRELGWKPQETFESGIRKTVE 332
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 173 (66.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
K R V GG GF+G H+V++L+ARG +V V D + F NP + D+
Sbjct: 19 KAKRCTVIGGCGFLGQHMVEQLLARGYAVNVFD---------IRQGFDNPRVQFFLGDLC 69
Query: 175 E-----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 228
P L V ++H C ASP + N + N +GT N++ K G + +LT
Sbjct: 70 SQQDLYPALKGVSTVFH--C-ASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILT 126
Query: 229 STSEVY--GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-R 285
S++ V G +++ ++ + PI Y E K E + H + A R
Sbjct: 127 SSASVIFEGVDIKNGTEDLPYAT-KPIDY---YTETKILQERAVLGAHDPEKNFLTTAIR 182
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH 345
+GPR D ++V + A + + + G+GK F FV ++V G ++ EH
Sbjct: 183 PHGIFGPR----DPQLVPILIEAAKKGKMKFMIGNGKNLVDFTFVENVVHG--HILAAEH 236
Query: 346 V 346
+
Sbjct: 237 L 237
Score = 51 (23.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKDF 419
+AK+L+G+ P V++ + K V+ F
Sbjct: 325 KAKKLMGYRPLVTMDDAVDKTVRSF 349
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 182 (69.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 66/239 (27%), Positives = 106/239 (44%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVV 174
+ I+VTGGAG++G+H V L+ G VIV+DN E + + + + D++
Sbjct: 1 MTILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGKSVTFYQGDIL 60
Query: 175 EPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
LL+ +D + H A + P+K + NV GTL + + + L+
Sbjct: 61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLV 120
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
S+S VYGDP P E + P G + Y + K E + D H + IAR+
Sbjct: 121 FSSSATVYGDPASLPITEDF-----PTGATNPYGQSKLMVEHILADLHH-SDPSWNIARL 174
Query: 287 --FNTYGPR---MCIDDGRVVSN----FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLV 334
FN G + +D + N F+AQ ++E L+V+G+ T V D +
Sbjct: 175 RYFNPVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYI 233
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 59/246 (23%), Positives = 96/246 (39%)
Query: 181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYGDPLQ 239
+D + H A + P+K + NV GTL + + + L+ S+S VYGDP
Sbjct: 74 IDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLVFSSSATVYGDPAS 133
Query: 240 HPQKETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD 298
P E + G NP G E A+ D +R + + +D
Sbjct: 134 LPITEDFPTGATNPYGQSKLMVE-HILADLHHSDPSWNIA-RLRYFNPVGAHASGLIGED 191
Query: 299 GRVVSN----FVAQAL--RKEPLTVYG------DGKQTRSFQFVSDLVEGLMRLMEGEHV 346
+ N F+AQ ++E L+V+G DG R + V DL G ++ +E
Sbjct: 192 PNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVDLAIGHLKALEKLAT 251
Query: 347 GP----FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGW 402
P +NLG +++L++ + ++ + P D D AK L W
Sbjct: 252 KPGLVTYNLGTGQGYSVLDMVKAFEKACGKSIAYLIAPRRPGDIAACYADPDHAKTDLDW 311
Query: 403 EPKVSL 408
+ SL
Sbjct: 312 QATHSL 317
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 71/244 (29%), Positives = 109/244 (44%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT----GRKENVMHHFGNPNFELIRH 171
GL ++VTG AGFVGSH L RGD V+ DNF K ++
Sbjct: 111 GLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 172 DVVE-PLLLEV-D-----QIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ + PLL ++ D I HLA A V Y NP I +N+ G +N+L +AK
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAG-VRYAMKNPQSYIASNIAGFVNLLEVAKAANP 229
Query: 224 R--FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
+ + S+S VYG ++P E + + P S Y K+ E + Y+ G+ +
Sbjct: 230 QPAIVWASSSSVYGLNTENPFSEEHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSL 285
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG--DGKQT-RSFQFVSDLVEGLM 338
R F YGP D F L + + +Y D ++ R F ++ D+V+G +
Sbjct: 286 TGLRFFTVYGPWGRPDMAYFF--FTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCV 343
Query: 339 RLME 342
++
Sbjct: 344 GALD 347
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 63/254 (24%), Positives = 105/254 (41%)
Query: 184 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 240
I HLA A V Y NP I +N+ G +N+L +AK + + S+S VYG ++
Sbjct: 190 ILHLAAQAG-VRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTEN 248
Query: 241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR 300
P E + + P S Y K+ E + Y+ G+ + R F YGP D
Sbjct: 249 PFSEEHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 304
Query: 301 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME---------GEHVGP-- 348
+ + + + + R F ++ D+V+G + ++ G+ G
Sbjct: 305 FFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQ 364
Query: 349 ---FNLGNPGEFTMLELAQVVQETIDPNAKIEF--RPNTEDDPHKRKPDISRAKELLGWE 403
+NLGN + L +++ + AK P D P+ ++S A + G++
Sbjct: 365 LRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHA-NVSLAYKDFGYK 423
Query: 404 PKVSLRKGLPKMVK 417
P L GL K VK
Sbjct: 424 PTTDLAAGLRKFVK 437
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 150 (57.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 55/186 (29%), Positives = 81/186 (43%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHHFGNPN-FELIRHDV- 173
++VTGGAG++GSH RL+ V +VDN G V F P + I D+
Sbjct: 73 VLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLG 132
Query: 174 ----VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
V + E D + H A A P+K TL +L G + L+
Sbjct: 133 DAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLI 192
Query: 228 -TSTSEVYGDPLQHP-QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
+ST YG+P P +ET +NP Y + K+ AE + +D+ + + + V I R
Sbjct: 193 YSSTCATYGEPDIMPITEETPQVPINP------YGKAKKMAEDIILDFSKNSDMAVMILR 246
Query: 286 IFNTYG 291
FN G
Sbjct: 247 YFNVIG 252
Score = 77 (32.2 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 23/97 (23%), Positives = 46/97 (47%)
Query: 320 DGKQTRSFQFVSDLVEGLMRLMEG---EHVGPFNLGNPGEFTMLELAQVVQETIDPNAKI 376
DG R + V+DLV+ ++ ++ VG +N+G ++ E + ++ KI
Sbjct: 299 DGTCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKI 358
Query: 377 EFRPNTEDDPHKRKPDISRAKELLGWEPK-VSLRKGL 412
++ P D + D S+ ++ L W K +L++ L
Sbjct: 359 DYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESL 395
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 182 (69.1 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 67/246 (27%), Positives = 109/246 (44%)
Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF----TGRKENVMHHFGNPNFELI 169
R G+ ++VTG AGFVG+H+ L RGD V+ +DNF T K + ++
Sbjct: 89 RNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIV 148
Query: 170 RHDVVEPLLL----EV---DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRV 221
D+ + LL EV + HLA A V Y NP + +N+ G +N+L + K
Sbjct: 149 EGDINDLSLLKKLFEVVPFTHVMHLAAQAG-VRYAMENPGSYVHSNIAGFVNLLEVCKSA 207
Query: 222 GAR--FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
+ + S+S VYG + P E + P S Y K+ E + Y+ G+
Sbjct: 208 NPQPAIVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGL 263
Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEG 336
+ R F YGP D F L+ + ++++ G R F ++ D+V+G
Sbjct: 264 SLTGLRFFTVYGPWGRPDMAYFF--FTRDILKGKAISIFEGANHGTVARDFTYIDDIVKG 321
Query: 337 LMRLME 342
+ ++
Sbjct: 322 CLGALD 327
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 66/268 (24%), Positives = 109/268 (40%)
Query: 184 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 240
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 170 VMHLAAQAG-VRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKV 228
Query: 241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR 300
P E + P S Y K+ E + Y+ G+ + R F YGP D
Sbjct: 229 PFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 284
Query: 301 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME---------GEHVGP-- 348
+ + + G R F ++ D+V+G + ++ G+ G
Sbjct: 285 FFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQ 344
Query: 349 ---FNLGNPGEFTMLELAQVVQETIDPNAKIEFR--PNTEDDPHKRKPDISRAKELLGWE 403
FNLGN + +L +++ + AK P D P +IS A+ G++
Sbjct: 345 LRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHA-NISSAQREFGYK 403
Query: 404 PKVSLRKGLPKMVKDFRQRIFGDHKEGG 431
P L+ GL K V+ + G +K+GG
Sbjct: 404 PSTDLQTGLKKFVRWY----LGYYKQGG 427
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 178 (67.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 78/303 (25%), Positives = 127/303 (41%)
Query: 110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI 169
+G +RI+VTGG+G VG + +++A G + + F K+ + L
Sbjct: 1 MGEPHGSMRILVTGGSGLVG-RAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQ-ALF 58
Query: 170 RHDVVEPLLLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 QK--VQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGARKVV 110
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIP 170
Query: 287 FNTYGP--RMCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVE-GLMR 339
N +GP I+DG V+ + + L K LTV+G GK R F + DL +
Sbjct: 171 TNVFGPYDNFNIEDGHVLPGLIHKVHLAKSSDSALTVWGTGKPRRQFIYSLDLARLFIWV 230
Query: 340 LMEGEHVGPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAK 397
L E V P ++G E ++ E A+ V E +D N ++ F D +K+ + +
Sbjct: 231 LREYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVTFDSTKSDGQYKKTASNGKLR 290
Query: 398 ELL 400
L
Sbjct: 291 SYL 293
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 147 (56.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 57/196 (29%), Positives = 88/196 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-------KENVMHHFGNPNF---EL 168
++V+GGAG++GSH V +L+ G SV+VVDN K+ H +F +L
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 169 IRHDVVEPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 226
+E + E D + H A + P+ N+VGT+ +L + + G + L
Sbjct: 66 RDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNL 125
Query: 227 LTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA- 284
+ S+S VYG P + P E + PI + Y K E + D + G+ E +I
Sbjct: 126 VFSSSATVYGSPKEVPCTEEF-----PISALNPYGRTKLFIEEICRDVY-GSDPEWKIIL 179
Query: 285 -RIFNTYGPRMCIDDG 299
R FN G D G
Sbjct: 180 LRYFNPVGAHPSGDIG 195
Score = 75 (31.5 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 305 FVAQ-ALRKEP-LTVYG------DGKQTRSFQFVSDLVEG---LMRLMEGEHVG--PFNL 351
FV Q A+ + P LTV+G DG R + V DL +G +R +E +G +NL
Sbjct: 208 FVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVIDLADGHIAALRKLEDCKIGCEVYNL 267
Query: 352 GNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKG 411
G ++LE+ ++ + D RA+ L W+ K G
Sbjct: 268 GTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAKY----G 323
Query: 412 LPKMVKD 418
+ +M +D
Sbjct: 324 IEEMCRD 330
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 176 (67.0 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 78/303 (25%), Positives = 128/303 (42%)
Query: 110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI 169
+G + +RI+VTGG+G VG + +++A G + D F K+ + L
Sbjct: 1 MGEPQGSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTR-ALF 58
Query: 170 RHDVVEPLLLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 --EKVQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVV 110
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIP 170
Query: 287 FNTYGPR--MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVE-GLMR 339
N +GP I+DG V+ + + L K LTV+G G R F + DL + +
Sbjct: 171 TNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV 230
Query: 340 LMEGEHVGPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAK 397
L E V P ++G E ++ E A+ V E +D + ++ F D K+ S+ +
Sbjct: 231 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLR 290
Query: 398 ELL 400
L
Sbjct: 291 TYL 293
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 179 (68.1 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 65/244 (26%), Positives = 108/244 (44%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH----FGNPNFELIRH 171
G+ ++VTG AGFVG+H+ L RGD VI +DNF ++ ++
Sbjct: 96 GITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEG 155
Query: 172 DV--VEPL-----LLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ VE L ++ + HLA A V Y NP + +N+ G +N+L + K V
Sbjct: 156 DINDVELLRKLFKIVSFTHVMHLAAQAG-VRYAMENPSSYVHSNIAGFVNLLEICKSVNP 214
Query: 224 R--FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
+ + S+S VYG + P E + P S Y K+ E + Y+ G+ +
Sbjct: 215 QPAIVWASSSSVYGLNTKVPFSEKDKTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSL 270
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEGLM 338
R F YGP D F L+ + ++++ G R F ++ D+V+G +
Sbjct: 271 TGLRFFTVYGPWGRPDMAYFF--FTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCL 328
Query: 339 RLME 342
++
Sbjct: 329 AALD 332
Score = 170 (64.9 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 68/271 (25%), Positives = 112/271 (41%)
Query: 178 LLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVY 234
++ + HLA A V Y NP + +N+ G +N+L + K V + + S+S VY
Sbjct: 169 IVSFTHVMHLAAQAG-VRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVY 227
Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
G + P E + P S Y K+ E + Y+ G+ + R F YGP
Sbjct: 228 GLNTKVPFSEKDKTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWG 283
Query: 295 CIDDGRVV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME---------GE 344
D + + + G R F ++ D+V+G + ++ G+
Sbjct: 284 RPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGK 343
Query: 345 HVGP-----FNLGNPGEFTMLELAQVVQETIDPNAKIEF--RPNTEDDPHKRKPDISRAK 397
GP FNLGN + +L ++++ + AK P D P +IS A+
Sbjct: 344 KRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHA-NISLAQ 402
Query: 398 ELLGWEPKVSLRKGLPKMVKDFRQRIFGDHK 428
LG++P L+ GL K V+ + GD K
Sbjct: 403 RELGYKPTTDLQTGLKKFVRWYLSYYSGDKK 433
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 176 (67.0 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 61/251 (24%), Positives = 113/251 (45%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVV 174
+R++VTGG+G++GSH +L+ G V+++DN ++ V+ + D+
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQPTFVEGDIR 60
Query: 175 -EPLLLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
E L+ E+ + + H A + P++ NV GTL ++ + + F+
Sbjct: 61 NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGAGV-EVRIA 284
+S++ VYGD + P E++ P G +S Y + K E + D + + +
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLVE 335
R FN G D G + +N ++AQ R++ L ++G+ V D +
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIH 235
Query: 336 GLMRLMEGEHV 346
+M L +G HV
Sbjct: 236 -VMDLADG-HV 244
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 156 (60.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 55/187 (29%), Positives = 84/187 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFGNPNFELIRHDV-- 173
++VTGGAG++GSH V +L+ G S +VVDN+ + V G L H V
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 174 -----VEPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 226
+E + E D + H A + P+ N+VGT+ +L + + G + L
Sbjct: 65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124
Query: 227 LTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV-EVRIA 284
+ S+S VYG P + P E +PI + Y K E + D HR ++ +
Sbjct: 125 VFSSSATVYGWPKEVPCTEE-----SPISATNPYGRTKLFIEEICRDVHRSDSEWKIILL 179
Query: 285 RIFNTYG 291
R FN G
Sbjct: 180 RYFNPVG 186
Score = 62 (26.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 29/127 (22%), Positives = 52/127 (40%)
Query: 305 FVAQ-ALRKEP-LTVYG------DGKQTRSFQFVSDLVEG---LMRLMEGEHVG--PFNL 351
+V Q A+ + P LTV+G DG R + V DL +G +R ++ + +NL
Sbjct: 207 YVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNL 266
Query: 352 GNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKG 411
G ++LE+ ++ + D +A+ L W+ K G
Sbjct: 267 GTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAK----NG 322
Query: 412 LPKMVKD 418
+ +M +D
Sbjct: 323 IEEMCRD 329
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 66/246 (26%), Positives = 107/246 (43%)
Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT----GRKENVMHHFGNPNFELI 169
R+G ++VTG AGFVG+H+ L RGD V+ +DNF K ++
Sbjct: 88 RRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVV 147
Query: 170 RHDVVEPLLL----EV---DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRV 221
D+ + LL EV + HLA A V Y NP + +N+ G +N+L + K
Sbjct: 148 EGDINDAALLKKLFEVVPFTHVMHLAAQAG-VRYAMENPSSYVHSNIAGFVNLLEVCKSA 206
Query: 222 GAR--FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
+ + S+S VYG + P E + P S Y K+ E + Y+ G+
Sbjct: 207 NPQPAIVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGL 262
Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEG 336
+ R F YGP D F L+ + ++++ G R F ++ D+V+G
Sbjct: 263 SLTGLRFFTVYGPWGRPDMAYFF--FTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKG 320
Query: 337 LMRLME 342
+ ++
Sbjct: 321 CLGALD 326
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 60/253 (23%), Positives = 101/253 (39%)
Query: 184 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 240
+ HLA A V Y NP + +N+ G +N+L + K + + S+S VYG +
Sbjct: 169 VMHLAAQAG-VRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKV 227
Query: 241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR 300
P E + P S Y K+ E + Y+ G+ + R F YGP D
Sbjct: 228 PFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 283
Query: 301 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME---------GEHVGP-- 348
+ + + G R F ++ D+V+G + ++ G+ G
Sbjct: 284 FFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQ 343
Query: 349 ---FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTED-DPHKRKPDISRAKELLGWEP 404
FNLGN + +L +++ + AK + D +IS A+ LG++P
Sbjct: 344 LRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKP 403
Query: 405 KVSLRKGLPKMVK 417
L+ GL K +
Sbjct: 404 TTDLQTGLKKFAR 416
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 173 (66.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 72/251 (28%), Positives = 113/251 (45%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVE 175
RI+VTGGAG++GSH V LI G + ++VDN E + + E D++
Sbjct: 7 RIMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKEIEFHHVDIMN 66
Query: 176 PLLLEVDQIYHLACPASPVHY-------KFN--PVKTIKTNVVGTLNMLGLA-KRVGARF 225
L D+I+ S +H+ + N P+K N+ GTL +L L K +
Sbjct: 67 EKAL--DEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKL 124
Query: 226 LLTSTSEVYGDPLQHPQKETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
+ +S++ VYGDP P E + NP G Y EG + L + +
Sbjct: 125 VFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEG--ILQDLCASDPEWNCI---ML 179
Query: 285 RIFNTYG--PRMCI-DDGRVVSN----FVAQ-ALRKEP-LTVYGDGKQTRSFQFVSDLVE 335
R FN G P I +D + + N +V Q A+ K P L+++G+ T V D +
Sbjct: 180 RYFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIH 239
Query: 336 GLMRLMEGEHV 346
++ L +G H+
Sbjct: 240 -VVDLAKG-HI 248
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 175 (66.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 65/244 (26%), Positives = 109/244 (44%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---FTGRKENVMHHF-GNPNFELIRH 171
GL ++VTG +GFVG+H+ L RGD V+ +DNF + + + ++
Sbjct: 95 GLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEG 154
Query: 172 DVVEPLLLE--VD-----QIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 223
D+ + +LL D + HLA A V Y NP + +N+ G +N+L ++K
Sbjct: 155 DINDAVLLRKLFDVVLFTHVMHLAAQAG-VRYAMQNPGSYVNSNIAGFVNLLEVSKSANP 213
Query: 224 R--FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
+ + S+S VYG + P E + P S Y K+ E + Y+ G+ +
Sbjct: 214 QPAIVWASSSSVYGLNSKVPFSEKDRTD-QPA---SLYAATKKAGEGIAHTYNHIYGLSL 269
Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD---GKQTRSFQFVSDLVEGLM 338
R F YGP D F L+ + +TV+ G R F ++ D+V+G +
Sbjct: 270 TGLRFFTVYGPWGRPDMAYFF--FTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCL 327
Query: 339 RLME 342
++
Sbjct: 328 GALD 331
Score = 155 (59.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 65/265 (24%), Positives = 111/265 (41%)
Query: 184 IYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVYGDPLQH 240
+ HLA A V Y NP + +N+ G +N+L ++K + + S+S VYG +
Sbjct: 174 VMHLAAQAG-VRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKV 232
Query: 241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR 300
P E + P S Y K+ E + Y+ G+ + R F YGP D
Sbjct: 233 PFSEKDRTD-QPA---SLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 288
Query: 301 VV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME---------GEHVGP-- 348
+ + + G R F ++ D+V+G + ++ G+ GP
Sbjct: 289 FFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAM 348
Query: 349 ---FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTED-DPHKRKPDISRAKELLGWEP 404
+NLGN + +L ++++ + AK + P + D +I+ A+ LG++P
Sbjct: 349 FRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKP 408
Query: 405 KVSLRKGLPKMVKDFRQRIFGDHKE 429
V L GL K VK + G K+
Sbjct: 409 AVDLETGLKKFVKWYMGFYTGSKKK 433
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 149 (57.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 52/155 (33%), Positives = 77/155 (49%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVV--- 174
++VTGGAG++GSH L+ +G V++VDN R E V H ++I H V
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAV-HRIEKLTGKKVIFHQVDLLD 67
Query: 175 EPLLLEV--DQ----IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
EP L +V +Q + H A + P+ K N+ GT+N++ K+ R F+
Sbjct: 68 EPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFVF 127
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEG 262
+S++ VYGDP + P G PI SC EG
Sbjct: 128 SSSATVYGDPTR-P------GGTIPIP-ESCPREG 154
Score = 65 (27.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 27/117 (23%), Positives = 49/117 (41%)
Query: 305 FVAQAL--RKEPLTVYGD------GKQTRSFQFVSDLVEGLMRLME--GEHV---GPFNL 351
++AQ R + L V+GD G R + V DL E + ++ +H P+NL
Sbjct: 212 YIAQVAVGRLDHLNVFGDDYPTSDGTPIRDYIHVCDLAEAHVAALDYLRQHFVSCRPWNL 271
Query: 352 GNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSL 408
G+ T+ ++ + + + + P D + +RA E L W+ S+
Sbjct: 272 GSGTGSTVFQVLNAFSKAVGRDLPYKVTPRRAGDVVNLTANPTRANEELKWKTSRSI 328
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 133 (51.9 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 58/190 (30%), Positives = 88/190 (46%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPN------FEL-- 168
I+VTGGAGF+G+H V +L+ G V ++DNF E V + P+ F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLGD 68
Query: 169 IRHDV-VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARF 225
+R+ +E L + D + H A + NP + N+VGT+N+ + +
Sbjct: 69 LRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCKM 128
Query: 226 LLTSTSE-VYGDPLQHPQKETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
++ S+S VYG P + P E + +NP G R+ K E + D + A E RI
Sbjct: 129 MVFSSSATVYGQPEKIPCMEDFELKAMNPYG-RT-----KLFLEEIARDIQK-AEPEWRI 181
Query: 284 A--RIFNTYG 291
R FN G
Sbjct: 182 ILLRYFNPVG 191
Score = 81 (33.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 31/120 (25%), Positives = 49/120 (40%)
Query: 311 RKEPLTVYG------DGKQTRSFQFVSDLVEG----LMRLMEGEHVG--PFNLGNPGEFT 358
R L VYG DG R + V DL +G L +L +G +NLG +
Sbjct: 220 RLPELNVYGHDYPTEDGSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTS 279
Query: 359 MLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKD 418
+LE+ ++ I+ P D +A++ LGW+ K G+ +M +D
Sbjct: 280 VLEMVAAFEKASGKKIPIKLCPRRSGDATAVYASTEKAEKELGWKAKY----GVDEMCRD 335
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 168 (64.2 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 76/303 (25%), Positives = 126/303 (41%)
Query: 110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI 169
+G +RI+VTGG+G VG + +++A G + + F K+ + L
Sbjct: 1 MGEPHGSMRILVTGGSGLVG-RAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQ-ALF 58
Query: 170 RHDVVEPLLLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ V+P + HLA + + K+N + + NV N+L A VG R ++
Sbjct: 59 QK--VQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGTRKVV 110
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIP 170
Query: 287 FNTYGP--RMCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVE-GLMR 339
N +GP I+DG V+ + + L K LTV+G GK R F + DL +
Sbjct: 171 TNVFGPYDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWV 230
Query: 340 LMEGEHVGPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAK 397
L E V P ++G E ++ E A+ V E +D + ++ F D +K+ + +
Sbjct: 231 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFSGEVTFDSTKSDGQYKKTASNGKLR 290
Query: 398 ELL 400
L
Sbjct: 291 SYL 293
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFG-NPNFELIRHD 172
++++VTGG G++GSH ++I G + +++DN + + + + G P F ++ D
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQF--VQGD 58
Query: 173 VVEPLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARF 225
+ + LL ++ + H A + P++ NV GTL ++ + G +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKS 118
Query: 226 LLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-AGVEVRI 283
L+ S+S VYG+P P E++ P + Y K E D+ + + +
Sbjct: 119 LVFSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSITL 173
Query: 284 ARIFNTYG--PRMCI-DDGRVVSN----FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLV 334
R FN G P + +D + + N FV Q R+E L+V+G T+ V D +
Sbjct: 174 LRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYI 233
Query: 335 EGLMRLMEGEHV 346
+M L +G H+
Sbjct: 234 H-VMDLADG-HI 243
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 63/252 (25%), Positives = 115/252 (45%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFG-NPNFELIRHD 172
++++VTGG G++GSH ++I G + +++DN + + + + G P F ++ D
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQF--VQGD 58
Query: 173 VVEPLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARF 225
+ + LL ++ + H A + P++ NV GTL ++ + G +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKS 118
Query: 226 LLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-AGVEVRI 283
L+ S+S VYG+P P E++ P + Y K E D+ + + +
Sbjct: 119 LVFSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSITL 173
Query: 284 ARIFNTYG--PRMCI-DDGRVVSN----FVAQAL--RKEPLTVYGDGKQTRSFQFVSDLV 334
R FN G P + +D + + N FV Q R+E L+V+G T+ V D +
Sbjct: 174 LRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYI 233
Query: 335 EGLMRLMEGEHV 346
+M L +G H+
Sbjct: 234 H-VMDLADG-HI 243
>TAIR|locus:2827733 [details] [associations]
symbol:AT2G28755 "AT2G28755" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AC005727 GO:GO:0016829 IPI:IPI00528391
RefSeq:NP_180442.1 UniGene:At.52956 ProteinModelPortal:Q8S8L8
SMR:Q8S8L8 EnsemblPlants:AT2G28755.1 GeneID:817425
KEGG:ath:AT2G28755 TAIR:At2g28755 Genevestigator:Q8S8L8
Uniprot:Q8S8L8
Length = 56
Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 334 VEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHK 388
+EGL RLM G+ GP N+GNPGEF+++ELA+ V+ I P+ +I+ N DDP +
Sbjct: 1 MEGLKRLMAGDKSGPINIGNPGEFSIVELAETVKALIKPDVEIKIVENIPDDPRQ 55
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 75/285 (26%), Positives = 119/285 (41%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN--FELIRHDVV 174
+RI+VTGG+G VG + +++A G + D F K+ + FE +R V
Sbjct: 8 VRILVTGGSGLVG-RAIQKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALFEKVRPTHV 66
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-V 233
L V ++ + K+N + + NV N+L A VG R +++ S +
Sbjct: 67 IHLAAMVGGLFR--------NIKYN-LDFWRKNVHINDNVLHSAFEVGVRKVVSCLSTCI 117
Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
+ D +P ET N P Y KR + Y + G N +GP
Sbjct: 118 FPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPH 177
Query: 294 --MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVE-GLMRLMEGEHV 346
I+DG V+ + + L K LTV+G GK R F + DL + L E V
Sbjct: 178 DNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVLREYNEV 237
Query: 347 GPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKR 389
P ++G E ++ E A+ V E +D + ++ F D K+
Sbjct: 238 EPIILSVGEEDEVSIQEAAEAVVEAMDFHGEVTFDTTKSDGQFKK 282
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 111 (44.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 57/212 (26%), Positives = 90/212 (42%)
Query: 154 KENVMHHFGNPNFELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVG 210
K+++ H+G +L + ++ EV +IY+L S V F+ + T + VG
Sbjct: 82 KDHMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVG 136
Query: 211 TLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA 266
TL +L K G RF STSE+YG + PQKET P RS Y K A
Sbjct: 137 TLRLLDAVKTCGLTDTVRFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYA 191
Query: 267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQT 324
+ +++ + +FN PR + R +S VA+ L + G+
Sbjct: 192 YWIVINFREAYNLFAVNGILFNHESPRRGSNFVTRKISRSVAKIHLGQLECFSLGNLDSM 251
Query: 325 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
R + D VE + +++ E F + GE
Sbjct: 252 RDWGHAKDYVEAMWLMLQQEEPVDFVIAT-GE 282
Score = 76 (31.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 101 AVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKEN 156
A +GG + KRK ++TG G GS+L + L+A+G V + +F TGR E+
Sbjct: 6 ATTTGGGMNGDSKRKRKVAIITGITGQDGSYLAELLLAKGYEVHGILRRSSSFNTGRIEH 65
Query: 157 VMHH 160
+ H+
Sbjct: 66 LYHN 69
Score = 64 (27.6 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 365 VVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
V+ +DP +RP TE D + D S+A ++LGW+P+V+ + + +MV
Sbjct: 319 VIHVRVDPKY---YRP-TEVD--YLQGDSSKAFKVLGWKPRVTFEELVKEMV 364
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 75/303 (24%), Positives = 126/303 (41%)
Query: 110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI 169
+G R RI+VTGG+G VG + +++ G + D F K+ + L
Sbjct: 1 MGDPRGTRRILVTGGSGLVG-RAIQKVVEDGARLPGEDWVFVSSKDADLTDAAQTR-ALF 58
Query: 170 RHDVVEPLLLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ V+P + HLA + + K+N + + N+ N+L A VG R ++
Sbjct: 59 QQ--VQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNIHINDNVLHSAFEVGVRKVV 110
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIP 170
Query: 287 FNTYGPR--MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVE-GLMR 339
N +GP I+DG V+ + + L K LTV+G G+ R F + DL +
Sbjct: 171 TNVFGPHDNFSIEDGHVLPGLIHKVHLAKSSGSALTVWGTGRPRRQFIYSLDLARLFIWA 230
Query: 340 LMEGEHVGPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAK 397
L E + V P ++G E ++ E A+ V E +D + ++ F D K+ ++ +
Sbjct: 231 LREYDEVEPIILSVGEEDEVSVQEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNAKLR 290
Query: 398 ELL 400
L
Sbjct: 291 AYL 293
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 155 (59.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 63/228 (27%), Positives = 101/228 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-- 175
R V GG+GF+G H+V++L+ARG +V V D + F NP D+
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGYAVNVFD---------IQQGFDNPQVRFFLGDLCSRQ 89
Query: 176 ---PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
P L V+ ++H C ASP N + N +GT N++ K G + +LTS++
Sbjct: 90 DLYPALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSA 146
Query: 232 EVY--GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFN 288
V G +++ ++ + + PI Y E K E + + + A R
Sbjct: 147 SVIFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLGANDPEKNFLTTAIRPHG 202
Query: 289 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 336
+GPR D ++V + A + V G+GK F FV ++V G
Sbjct: 203 IFGPR----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHG 246
Score = 53 (23.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKDFR 420
RAK+ +G++P V++ + + V+ FR
Sbjct: 342 RAKKAMGYQPLVTMDDAMERTVQSFR 367
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 165 (63.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 80/323 (24%), Positives = 138/323 (42%)
Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV 173
+K I VTG G GS ++ RL +G S ++ T ++ ++ + FE ++
Sbjct: 2 QKDAPIFVTGHRGLAGSAILRRLKKQGYSSLITR---THQELDLTNK--EKVFEFFANNC 56
Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
E + L ++ + S +H PV I+ N+ N++ + R R L +S
Sbjct: 57 PEYVFLAAARVGGIN--DSNLH----PVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSSC 110
Query: 233 VYGDPLQHPQKETYW--GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
+Y + P KE Y+ G + P Y K Y+R + A N +
Sbjct: 111 IYSNDAPRPLKEIYFNSGKLEP--TNRAYSTAKIAGIEHCWAYNRQYKTQYLCAMPTNLF 168
Query: 291 GPR--MCIDDGRVVSNFVA---QAL-RKEP-LTVYGDGKQTRSFQFVSDLVEGLMRLME- 342
GP +++G VV++ ++ QA +K+P ++G GK R F + DL E LM
Sbjct: 169 GPNDNYDLENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLAEACCHLMNL 228
Query: 343 ---------GEHVGP--FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKP 391
G+ P N+G+ E ++ ELA ++Q+ I I + + D +
Sbjct: 229 PDDIVKSVFGQDDQPPIVNIGSGKEISIYELALLIQDIIGYQGDIIWDHSKPDGALTKVM 288
Query: 392 DISRAKELLGWEPKVSLRKGLPK 414
D+S + LGW + L G+ K
Sbjct: 289 DVS-LMQYLGWSAREGLVSGIKK 310
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 124 (48.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 50/204 (24%), Positives = 89/204 (43%)
Query: 165 NFELIRHDVVEPLLLEVDQIYHLA--CPASPVHYKF-NPVKTIKTNVVGTLNMLG----- 216
N++ + +VE E+++I H+ S V F +P+ K N++ T N+L
Sbjct: 74 NYKFLYQFMVEDS--EINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRIL 131
Query: 217 LAKRVGAR----FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD 272
L K+ R F+ ST EVYG+ ++ + +NP S Y K + +
Sbjct: 132 LGKKEELRNRLNFVHVSTDEVYGEQDENASVDEK-SKLNPT---SPYAASKAAVDLIIQS 187
Query: 273 YHRGAGVEVRIARIFNTYGPR--------MCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 324
Y + V + R N YGPR M + + N +Q + ++ +T++GDG
Sbjct: 188 YRYSYKISVTVIRANNVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHK 247
Query: 325 RSFQFVSDLVEG--LMRLMEGEHV 346
R + + D + L+ + +G V
Sbjct: 248 RKYLHIYDFINAIDLVWMKQGSEV 271
Score = 65 (27.9 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARG--------DSVIVVDNFFTGRKENVMHHFGNPNF 166
KG ++ TGGAGF+GS+ +D + + D + V N+ T V++ PNF
Sbjct: 9 KGYALI-TGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQ---PNF 64
Query: 167 ELIRHDV 173
+ D+
Sbjct: 65 RFLEMDL 71
Score = 58 (25.5 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 18/81 (22%), Positives = 36/81 (44%)
Query: 349 FNLGNPGEFTMLELAQVVQE----------TIDPNAKIEFRPNTEDDPHKRKPDISRAKE 398
FN+G+ E L L + + + +D + I F + + + + + K
Sbjct: 285 FNIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYSKYITFVQDRNYNDSRYSLNYEKIKS 344
Query: 399 LLGWEPKVSLRKGLPKMVKDF 419
L GW P++ L GL K++ ++
Sbjct: 345 L-GWRPQIPLETGLRKLIDEY 364
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 119 (46.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 60/217 (27%), Positives = 101/217 (46%)
Query: 182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQH 240
D I HLA + P++ N+V +LN++ + + + F+ +S++ VYG P +
Sbjct: 83 DGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSEL 142
Query: 241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE--VRIARIFNTYGPR---MC 295
P E + G+ + Y + K E + +D + A E V + R FN G +
Sbjct: 143 PITEK---SQTGQGITNPYGQTKYMMEQILIDVGK-ANPEWNVVLLRYFNPVGAHKSGLI 198
Query: 296 IDDGRVVSN----FVAQ-ALRKEP-LTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPF 349
+D + V N +V+Q A+ K P LT+YGD T V D + ++ L +G HV F
Sbjct: 199 GEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIH-VVDLAKG-HVKAF 256
Query: 350 N----LGNPG-EFTMLE--LAQVVQETIDPNAKIEFR 379
+ +GN G E L + V++ +D K+ R
Sbjct: 257 DRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGR 293
Score = 91 (37.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF 149
+ I+VTG AGF+GSH V L+ G +V+ +DNF
Sbjct: 1 MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNF 33
Score = 71 (30.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 305 FVAQ-ALRKEP-LTVYGD------GKQTRSFQFVSDLVEGLM----RLMEGEHVGP--FN 350
+V+Q A+ K P LT+YGD G R + V DL +G + R+ ++G +N
Sbjct: 212 YVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYN 271
Query: 351 LGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRK 410
LG +++ ++ +++ + ++ D D S A+E LGW + L +
Sbjct: 272 LGTGVGYSVRQMVDALKKVSGRDIPVKIGVPRPGDVASVYCDPSLAQEKLGWRAETGLEE 331
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/195 (27%), Positives = 91/195 (46%)
Query: 113 KRKGL-RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFGNPN-FE 167
+ +G+ ++VTGGAG++GSH RL+ V +VDN G + + F +
Sbjct: 90 REEGVTHVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQ 149
Query: 168 LIRHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVK---TIKTNVVGTLNMLGL 217
I D+ +PL +E D + H A A P+K I +N +G L +
Sbjct: 150 FIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLE--AM 207
Query: 218 AKRVGARFLLTSTSEVYGDPLQHP-QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
A+ + + +ST YG+P + P ++T +NP Y + K+ AE + +D+ +
Sbjct: 208 ARHKVKKLIYSSTCATYGEPEKMPITEDTPQVPINP------YGKAKKMAEDMILDFSKN 261
Query: 277 AGVEVRIARIFNTYG 291
+ + V I R FN G
Sbjct: 262 SDMAVMILRYFNVIG 276
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 73/274 (26%), Positives = 117/274 (42%)
Query: 110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI 169
+G + +RI+VTGG+G VG + +++A G + D F K+ + L
Sbjct: 1 MGEPQGSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTR-ALF 58
Query: 170 RHDVVEPLLLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 --EKVQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVV 110
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIP 170
Query: 287 FNTYGPR--MCIDDGRVVSNFVAQA-LRKEP---LTVYGDGKQTRSFQFVSDLVE-GLMR 339
N +GP I+DG V+ + + L K LTV+G G R F + DL + +
Sbjct: 171 TNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWV 230
Query: 340 LMEGEHVGPF--NLGNPGEFTMLELAQVVQETID 371
L E V P ++G E ++ E A+ V E +D
Sbjct: 231 LREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMD 264
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 130 (50.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPN------FEL-- 168
I+VTGGAGF+G+H V +L+ +G V ++DN E V + P+ F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLGD 68
Query: 169 IRHDV-VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARF 225
+R+ +E L D + H A + NP + N+VGT+N+ + +
Sbjct: 69 LRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCKM 128
Query: 226 LLTSTSE-VYGDPLQHPQKETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV-EVR 282
++ S+S VYG P P E + +NP G R+ K E + D H ++
Sbjct: 129 MVFSSSATVYGQPEIVPCVEDFELQAMNPYG-RT-----KLFLEEIARDIHAAEPEWKII 182
Query: 283 IARIFNTYGPRMCIDDGRV 301
+ R FN G + GR+
Sbjct: 183 LLRYFNPVGAH---ESGRI 198
Score = 77 (32.2 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 320 DGKQTRSFQFVSDLVEG----LMRLMEGEHVG--PFNLGNPGEFTMLELAQVVQETIDPN 373
DG R + V DL +G L +L +G +NLG ++LE+ ++
Sbjct: 235 DGSAVRDYIHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKK 294
Query: 374 AKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKD 418
I+ P D +A++ LGW+ K G+ +M +D
Sbjct: 295 IPIKLCPRRAGDATAVYASTQKAEKELGWKAKY----GVDEMCRD 335
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 159 (61.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 62/233 (26%), Positives = 107/233 (45%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
+ V GG+GF+G H+V++L+ARG +V V D V G +L + P
Sbjct: 27 KCTVIGGSGFLGQHMVEQLLARGYTVNVFDMRQGFDNPRVQFFLG----DLCSQQDLYPA 82
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY-- 234
L V ++H C ASP N + N +GT N++ K G + +LTS++ V
Sbjct: 83 LKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFE 139
Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPR 293
G +++ ++ + + PI Y E K E +D + + +A R +GPR
Sbjct: 140 GVNIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKRNFLTMAIRPHGIFGPR 195
Query: 294 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV 346
D ++V + A + + + G+G+ F FV ++V G ++ EH+
Sbjct: 196 ----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHG--HILAAEHL 242
Score = 45 (20.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKDF 419
RA++++G+ P V++ + + V+ F
Sbjct: 330 RARKVMGYRPLVTMDDAIERTVQSF 354
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 157 (60.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 61/236 (25%), Positives = 106/236 (44%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
K + V GG+GF+G H+V++L+ RG +V V D V G +L +
Sbjct: 25 KAKKCTVIGGSGFLGQHMVEQLLERGYTVNVFDIHQGFDNPRVQFFIG----DLCNQQDL 80
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
P L V ++H C ASP Y N + N +GT ++ + G + +LTS++ V
Sbjct: 81 YPALKGVSTVFH--C-ASPPPYSNNKELFYRVNFIGTKTVIETCREAGVQKLILTSSASV 137
Query: 234 Y--GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTY 290
G +++ ++ + + PI Y E K E +D + + A R +
Sbjct: 138 VFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKKNFLTAAIRPHGIF 193
Query: 291 GPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV 346
GPR D ++V + A + + + G+G+ F FV ++V G ++ EH+
Sbjct: 194 GPR----DPQLVPILIDAARKGKMKFMIGNGENLVDFTFVENVVHG--HILAAEHL 243
Score = 47 (21.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKDF 419
+AK+L G+ P V++ + + + V+ F
Sbjct: 331 KAKKLFGYRPLVTMDEAVERTVQSF 355
>UNIPROTKB|E2QVH4 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0005811 GO:GO:0008203 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 ProteinModelPortal:E2QVH4 Ensembl:ENSCAFT00000030435
Uniprot:E2QVH4
Length = 373
Score = 159 (61.0 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 62/233 (26%), Positives = 107/233 (45%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
+ V GG+GF+G H+V++L+ARG +V V D V G +L + P
Sbjct: 39 KCTVIGGSGFLGQHMVEQLLARGYTVNVFDMRQGFDNPRVQFFLG----DLCSQQDLYPA 94
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY-- 234
L V ++H C ASP N + N +GT N++ K G + +LTS++ V
Sbjct: 95 LKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFE 151
Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTYGPR 293
G +++ ++ + + PI Y E K E +D + + +A R +GPR
Sbjct: 152 GVNIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKRNFLTMAIRPHGIFGPR 207
Query: 294 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV 346
D ++V + A + + + G+G+ F FV ++V G ++ EH+
Sbjct: 208 ----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHG--HILAAEHL 254
Score = 45 (20.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKDF 419
RA++++G+ P V++ + + V+ F
Sbjct: 342 RARKVMGYRPLVTMDDAIERTVQSF 366
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 158 (60.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 64/236 (27%), Positives = 106/236 (44%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
G + VV GG+GF+G H+V++L+ +G SV V D + V G +L + +
Sbjct: 9 GKKCVVIGGSGFLGQHMVEKLLDKGYSVNVFDIQKRFDHDRVQFFLG----DLCNKEALL 64
Query: 176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 234
P L +V +H C ASP N K N +GT ++ K G + +LTS++ V
Sbjct: 65 PALQDVSVAFH--C-ASPAPSSDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTSSASVV 121
Query: 235 --GDPLQHPQKETYWGNVNPIGVRSCYDEGK--RTAETLTMDYHRGAGVEVRIARIFNTY 290
G +++ ++ + PI Y E K + E L+ + I R +
Sbjct: 122 FEGTDIKNGTEDLPYAK-KPIDY---YTETKILQEKEVLSANDPDNNFFTTAI-RPHGIF 176
Query: 291 GPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV 346
GPR D ++V + A + + GDGK F +V ++V G ++ EH+
Sbjct: 177 GPR----DPQLVPILIQAAKSGKMKFIIGDGKNLVDFTYVENVVHG--HILAAEHL 226
Score = 44 (20.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKDF 419
RAK +G++P VSL + + + ++ +
Sbjct: 314 RAKRDMGYKPVVSLDEAIDRTLQSY 338
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 154 (59.3 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 63/241 (26%), Positives = 107/241 (44%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
K + V GG+GF+G H+V++L++RG +V V D V F NP + D+
Sbjct: 25 KAKKCTVIGGSGFLGQHMVEQLLSRGYAVNVFD---------VRQGFDNPRVQFFIGDLC 75
Query: 175 E-----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 228
P L V ++H A P S + N + N GT ++ K G + +LT
Sbjct: 76 NQQDLYPALKGVSTVFHCASPPSNSN---NKELFYRVNSTGTKTVIETCKEAGVQKLILT 132
Query: 229 STSEVY--GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-R 285
S++ V G +++ ++ + + PI Y E K E +D + + A R
Sbjct: 133 SSASVVFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLDANDPKKNFLTAAIR 188
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH 345
+GPR D ++V + A + + + G+GK F FV ++V G ++ EH
Sbjct: 189 PHGIFGPR----DPQLVPVLIDAARKGKMKFMIGNGKNLVDFTFVENVVHG--HILAAEH 242
Query: 346 V 346
+
Sbjct: 243 L 243
Score = 48 (22.0 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 329 FVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIE-FRPNTEDDPH 387
F+S ++ GL H+ P+ + F + L V+ I FR H
Sbjct: 267 FLSRILTGLNYEAPKYHI-PYRVAYYLAFLLSLLVMVLSPLIQIQTTFTPFRVALAGTFH 325
Query: 388 KRKPDISRAKELLGWEPKVSLRKGLPKMVKDF 419
+ +AK+L+G+ P V++ + + V+ F
Sbjct: 326 YYSCE--KAKKLIGYRPLVTMDDAVERTVQSF 355
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 155 (59.6 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 63/228 (27%), Positives = 101/228 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-- 175
R V GG+GF+G H+V++L+ARG +V V D + F NP D+
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGYAVNVFD---------IQQGFDNPQVRFFLGDLCSRQ 89
Query: 176 ---PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
P L V+ ++H C ASP N + N +GT N++ K G + +LTS++
Sbjct: 90 DLYPALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSA 146
Query: 232 EVY--GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFN 288
V G +++ ++ + + PI Y E K E + + + A R
Sbjct: 147 SVIFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQERAVLGANDPEKNFLTTAIRPHG 202
Query: 289 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 336
+GPR D ++V + A + V G+GK F FV ++V G
Sbjct: 203 IFGPR----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHG 246
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 150 (57.9 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 59/226 (26%), Positives = 100/226 (44%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
K + V GG+GF+G H+V++L+ RG +V V D V G +L +
Sbjct: 24 KDRKCTVIGGSGFLGQHMVEQLLERGYAVNVFDKRQGFDNPRVQFFLG----DLCNQQDL 79
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
P L V ++H A PA + N + N +GT N++ + G + +LTS++ V
Sbjct: 80 YPALKGVSTVFHCASPAPSSN---NKELFYRVNYIGTKNVIETCREAGVQKLILTSSASV 136
Query: 234 Y--GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA-RIFNTY 290
G +++ ++ + + PI Y E K E + + + A R +
Sbjct: 137 IFEGVDIKNGTEDLPYA-MKPIDY---YTETKILQEKTVLGANDPDKNFLTTAIRPHGIF 192
Query: 291 GPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEG 336
GPR D ++V + A + + V G+GK F FV ++V G
Sbjct: 193 GPR----DPQLVPILIEAARKGKMKFVIGNGKNLVDFTFVENVVHG 234
Score = 51 (23.0 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 9/25 (36%), Positives = 18/25 (72%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKDF 419
+AK+LLG++P V++ + + V+ F
Sbjct: 330 KAKKLLGYQPLVTMDDAVERTVQSF 354
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 158 (60.7 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 77/311 (24%), Positives = 129/311 (41%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
+ RI V G G VGS +V +L A G + ++ R + + F F + D
Sbjct: 3 RNARIYVAGHRGLVGSAIVRKLTAEGYGNLLLRTSGELDLRDQAAVAAF----FAAEQPD 58
Query: 173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
V +V I +A P + ++ + I+ NV+ + G++K + L ST
Sbjct: 59 YVFLAAAKVGGI--VANNTYPAEFIYDNLM-IEANVIHSSYRTGVSKLL----FLGSTC- 110
Query: 233 VYGDPLQHPQKETYW--GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
+Y P +E Y G + P Y K +L Y+R G A N Y
Sbjct: 111 IYPKMASQPIREEYLLTGPLEP--TNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLY 168
Query: 291 GPRMCIDDGR------VVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVEGLMRLMEG 343
GP D + ++ F + P +TV+G G R F V D+ + + LM
Sbjct: 169 GPNDNFDLEKSHVLPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMR- 227
Query: 344 EHVGP--FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLG 401
H G N+G+ E ++ +LA +V+ + ++ F + D ++ D+SR L G
Sbjct: 228 HHEGNDIVNIGSGEEISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLHSL-G 286
Query: 402 WEPKVSLRKGL 412
W ++ L G+
Sbjct: 287 WRHRIGLEDGV 297
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 77/281 (27%), Positives = 119/281 (42%)
Query: 160 HFGN-PNFELIRH--DVVEPLLLEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNML 215
H+G+ + +R DV++P D++Y+LA S V F P T G L +L
Sbjct: 76 HYGDLSDASSLRRWLDVIKP-----DEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLL 129
Query: 216 GLAKRVGA------RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL 269
+ ++ +SE++G PQ ET P RS Y K A
Sbjct: 130 EAVRSHNIDNGRAIKYYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAASKCAAHWY 183
Query: 270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK-----EPLTVYGDGKQT 324
T++Y G+ +FN PR V+ + +AL + + G+ + +
Sbjct: 184 TVNYREAYGLYACNGILFNHESPRR---GENFVTRKITRALGRIKVGLQTKLFLGNIQAS 240
Query: 325 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAK--IE----- 377
R + F D VE + +++ E + + T+ E V + N K +E
Sbjct: 241 RDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRY 300
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKD 418
FRP TE D K D S+AKE+LGW+PKV K L KM+ D
Sbjct: 301 FRP-TEVD--NLKGDASKAKEMLGWKPKVGFEK-LVKMMVD 337
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/236 (24%), Positives = 101/236 (42%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE- 175
++I+++GGAG++GSH + + + + V+DN G K + F+ D+ +
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDF 60
Query: 176 ---PLLLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 228
L E D I H A NP+K N V T N++ + G +F+ +
Sbjct: 61 QGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIFS 120
Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR--IARI 286
ST+ YG+P ET +P+ + Y K +E + D A E + I R
Sbjct: 121 STAATYGEPQTPVVSET-----SPLAPINPYGRSKLMSEEVLRDASM-ANPEFKHCILRY 174
Query: 287 FNTYGPRMCIDDGR------VVSNFVAQ--ALRKEPLTVYGDGKQTRSFQFVSDLV 334
FN G M G+ ++ A+ A +++ L ++GD T+ + D +
Sbjct: 175 FNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFI 230
Score = 150 (57.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 60/240 (25%), Positives = 96/240 (40%)
Query: 182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH 240
D I H A NP+K N V T N++ + G +F+ +ST+ YG+P
Sbjct: 73 DAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIFSSTAATYGEPQTP 132
Query: 241 PQKETY-WGNVNPIGVRS--CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
ET +NP G RS +E R A ++ +A Y
Sbjct: 133 VVSETSPLAPINPYG-RSKLMSEEVLRDASMANPEFKHCILRYFNVAGACMDYTLGQRYP 191
Query: 298 DGRVVSNFVAQ--ALRKEPLTVYGDGKQT------RSFQFVSDLVEG----LMRLMEGEH 345
++ A+ A +++ L ++GD T R F V D+ L L E E
Sbjct: 192 KATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHLATLDYLQENES 251
Query: 346 VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPK 405
FN+G F++ E+ + +++ + K+E P DP D S+ + L W+PK
Sbjct: 252 -NVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPSVLISDASKIRNLTSWQPK 310
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 95/335 (28%), Positives = 135/335 (40%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-V 174
G RI++TG GFVG +++ L+A G + E + G + +R +
Sbjct: 3 GRRILITGANGFVGGYMIRELVAAGYQHSELHTLTVSGAEQSLR-IGQAHRCDLRDSASI 61
Query: 175 EPLLLEVDQ--IYHLACPASPVHYKFNPVKTIKTN--VVGTLNMLGLAKRVGARFLLTST 230
LL EV I HLA A P K +P N V L LA A + +
Sbjct: 62 HRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPHAVLVFAGS 121
Query: 231 SEVYGDPLQHPQKETYWGNVNP-IGVRSC--YDEGKRTAETLTMDYHRGAGVEVRIARIF 287
SE YG T G VN +R Y K A+ + + R G+ R F
Sbjct: 122 SESYGASFN-----TVAGAVNEGTALRPLTPYAATKAAAD-VALGQMRNDGLNAVRFRAF 175
Query: 288 NTYGPRMCIDDGRVVSNFVAQALR-----KEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
N GP D VV++F AQ + P+ G+ R F V D+V G +E
Sbjct: 176 NHTGPGQSPD--YVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDVVRGYRLALE 233
Query: 343 GE----HVGPFNL--GNPGEF-----TMLELAQV-VQETIDPNAKIEFRPNTEDDPHKRK 390
E G FNL G P T++++A V + DP AK+ R N D P +
Sbjct: 234 TELDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDP-AKL--RKN--DVP-RTW 287
Query: 391 PDISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFG 425
D +RA+ LGW P ++ + L + +I G
Sbjct: 288 GDANRARTELGWVPYLAFEQTLVDTLSSAGAKISG 322
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 137 (53.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 64/249 (25%), Positives = 107/249 (42%)
Query: 148 NFFTGRKENVMH--HFGNPNFELIRHDVVEP-----LLLEV--DQIYHLACPASPVHYKF 198
+F T R +++ H NP F L D+ + +L EV D++Y+L S V F
Sbjct: 38 SFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGA-MSHVAVSF 96
Query: 199 -NPVKTIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI 253
+P T + +GTL +L + +G RF STSE+YG + PQKET P
Sbjct: 97 ESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPF 151
Query: 254 GVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR-----MCIDDGRVVSNFVAQ 308
RS Y K A +T++Y G+ +FN PR + R ++N +AQ
Sbjct: 152 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIAN-IAQ 210
Query: 309 ALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQE 368
L E G+ R + D V+ +++ E F + ++++ + ++
Sbjct: 211 GL--ESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAA 268
Query: 369 TIDPNAKIE 377
+ + E
Sbjct: 269 QLGIKLRFE 277
Score = 63 (27.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMV 416
D ++A E LGW+P+++LR+ + +MV
Sbjct: 323 DPTKAHEKLGWKPEITLREMVSEMV 347
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 82/318 (25%), Positives = 127/318 (39%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
K +I V G G VGS +V +L +G + +V+ + +L R V
Sbjct: 15 KSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKT--------------HAELDLTRQADV 60
Query: 175 EPLLLEVDQIYHL--ACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGARFLL-TST 230
E + +Y + A +H P I N+ N++ A G + LL +
Sbjct: 61 ESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGS 120
Query: 231 SEVYGD--PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
S +Y P P+ ++ P Y K Y G + N
Sbjct: 121 SCIYPKFAPQPIPESALLTASLEP--TNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTN 178
Query: 289 TYGPRMCIDDGRVVSNFVAQALRK----------EPLTVYGDGKQTRSFQFVSDLVEGLM 338
YGP D+ ++ V AL + E + V+G G R F V DL + +
Sbjct: 179 LYGPN---DNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACV 235
Query: 339 RLME---G-EHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDIS 394
L++ G EHV N+G+ E T+ ELA++V+E + K+ + D ++ D S
Sbjct: 236 FLLDRYSGLEHV---NIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSS 292
Query: 395 RAKELLGWEPKVSLRKGL 412
+ L GW PKVSLR GL
Sbjct: 293 KLASL-GWTPKVSLRDGL 309
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 149 (57.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 63/233 (27%), Positives = 103/233 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
R V GG+GF+G HLV+RL+ RG +V V D V + G +L +
Sbjct: 11 RCTVIGGSGFLGRHLVERLVDRGYTVNVFDIRQAYELPGVTFYQG----DLCDKLALVMA 66
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY-- 234
L EV ++H C ASP + + N+ GT ++ G + +LTS++ V
Sbjct: 67 LKEVSIVFH--C-ASPAPGSDDGALFQRVNIDGTRTVIQACHEAGVQKLILTSSASVVFE 123
Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY-HRGAGVEVRIARIFNTYGPR 293
G +++ +++ + PI Y E K E L ++ + G R +GPR
Sbjct: 124 GTDIKNGKEDLPYAK-KPIDY---YTETKIKQEKLVLEACSKEKGFLTVAIRPHGIFGPR 179
Query: 294 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHV 346
D ++V V A R + + GDG F +V ++V G ++ EH+
Sbjct: 180 ----DPQLVPILVDTARRGKMKFIIGDGSNLVDFTYVENVVHG--HILAAEHL 226
Score = 45 (20.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 394 SRAKELLGWEPKVSLRKGLPKMVKDF 419
+RAK+ +G+ P V L++ + + V+ +
Sbjct: 313 ARAKQDMGYRPLVPLQEAVVRTVESY 338
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 151 (58.2 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 60/250 (24%), Positives = 112/250 (44%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVV 174
+ I++TGGAG++GSH L+ +IVVDN E N + FE + +V+
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGKQFEFYKENVL 60
Query: 175 E-----PLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
+ LE ++ + H A + P+ N++ + + + ++ + F+
Sbjct: 61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV-EVRIAR 285
+S++ VYG P P E + P+ V + Y + K E + D + + + R
Sbjct: 121 FSSSATVYGIPKTLPITEEF-----PLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLR 175
Query: 286 IFNTYGP----RMCIDDGRVVSN---FVAQ-ALRK-EPLTVYGDGKQTRSFQFVSDLVEG 336
FN +G R+ D + +N +V Q A+ K + L ++G+ T+ V D +
Sbjct: 176 YFNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIH- 234
Query: 337 LMRLMEGEHV 346
++ L +G HV
Sbjct: 235 VVDLAKG-HV 243
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 49/185 (26%), Positives = 82/185 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-------HHFGNPNFELIRH 171
++VTGGAG++GSH V LI G +V DN ++V HH +L
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 73
Query: 172 DVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
+E + E +D + H A + P++ N++GT+ +L L ++ ++F+ +
Sbjct: 74 KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 133
Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG--AGVEVRIARI 286
S++ VYGD + P P+G + Y K E + D + + I R
Sbjct: 134 SSATVYGDATRFPNMIPIPEEC-PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 192
Query: 287 FNTYG 291
FN G
Sbjct: 193 FNPIG 197
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 73/302 (24%), Positives = 125/302 (41%)
Query: 159 HHFGNPNFELIRHDVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG 216
HH +L +E + E +D + H A + P++ N++GT+ +L
Sbjct: 61 HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLE 120
Query: 217 LAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 275
L ++ ++F+ +S++ VYGD + P P+G + Y K E + D +
Sbjct: 121 LMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC-PLGPTNPYGHTKYAIENILNDLYN 179
Query: 276 G--AGVEVRIARIFNTYG--PRMCI-DDGRVVSN----FVAQAL--RKEPLTVYGD---- 320
+ I R FN G P I +D + N ++AQ R+E L ++GD
Sbjct: 180 SDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS 239
Query: 321 --GKQTRSFQFVSDLVEG---LMRLMEG--EHVG---PFNLGNPGEFTMLELAQVVQET- 369
G R + V DL +G ++ +E E+ G +NLG+ T+ E+ +
Sbjct: 240 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS 299
Query: 370 -IDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFGDHK 428
ID K+ R + KPD RAK L W+ ++ + + K + FG
Sbjct: 300 GIDLPYKVTGRRAGDVLNLTAKPD--RAKRELKWQTELQVEDSCKDLWKWTTENPFGYQL 357
Query: 429 EG 430
G
Sbjct: 358 RG 359
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 79/340 (23%), Positives = 140/340 (41%)
Query: 101 AVNSGGKIPLG--LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM 158
A N+G ++ G + K +I V G G VGS +V +L +G + +V+
Sbjct: 2 ADNTGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRT---------- 51
Query: 159 HHFGNPNFELIRHDVVEPLLLEVDQIYHL--ACPASPVHYKFN-PVKTIKTNVVGTLNML 215
+ +L VE +Y + A +H P I N+ N++
Sbjct: 52 ----HSELDLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVI 107
Query: 216 GLAKRVGARFLL-TSTSEVYGD--PLQHPQKETYWGNVNPIGVRSCYDE--GKRTAETLT 270
A G + LL +S +Y P P+ G + P + G + +
Sbjct: 108 HSAYTHGVKKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYR 167
Query: 271 MDYHRGA--GVEVRIARIFNTYGPRMCIDDGRVVSNF-VAQALRKEPLTVYGDGKQTRSF 327
+ + A G+ + + + P ++ F A+A + + V+G G R F
Sbjct: 168 LQHQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREF 227
Query: 328 QFVSDLVEGLMRLME---G-EHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTE 383
V DL + + LM+ G EHV N+G+ E T+ ELA++V+E + K+ +
Sbjct: 228 LHVDDLADACVFLMDQYSGFEHV---NVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKP 284
Query: 384 DDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 423
D ++ D S+ L GW PK+SL+ GL + + + + +
Sbjct: 285 DGTPRKLMDSSKLASL-GWTPKISLKDGLSQTYEWYLENV 323
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 115 (45.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 54/201 (26%), Positives = 89/201 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRK-----ENVMHHFGNP-NF-- 166
++VTGGAG++GSH V ++ G +VI VDN + +G K V G NF
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYR 65
Query: 167 -ELIRHDVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVG 222
++ + V + E +D + H A + P++ N+ GT +L +A
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNV 125
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGAGVEV 281
+F+ +S++ VYG+P P E + P G S Y + K E + D +
Sbjct: 126 FKFVYSSSATVYGEPKFLPVTEEH-----PTGNCTSPYGKTKYFTEEILKDLCKSDKRWA 180
Query: 282 RIA-RIFNTYGPRMCIDDGRV 301
++ R FN G + GR+
Sbjct: 181 VVSLRYFNPVGAHI---SGRI 198
Score = 76 (31.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/128 (25%), Positives = 56/128 (43%)
Query: 305 FVAQ-ALRKEP-LTVYG------DGKQTRSFQFVSDLVEG----LMRLMEGEHVGPF--N 350
++AQ A+ + P L+VYG DG R + + DL EG L +L G F N
Sbjct: 212 YIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYN 271
Query: 351 LGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRK 410
LG +++L++ + ++ D D + A + LGW+ + +
Sbjct: 272 LGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAE----R 327
Query: 411 GLPKMVKD 418
G+ KM +D
Sbjct: 328 GIDKMCED 335
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 66/293 (22%), Positives = 122/293 (41%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPL 177
++VTGG+G VG +++ + D V F ++ + FE I+ V L
Sbjct: 10 VLVTGGSGLVGKG-IEKYVKETDKSNDVWVFMRSSDCDLKSRESTRSYFEKIKPTHVIHL 68
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYGD 236
V ++ S + YK V+ + N+ N+L K ++ S ++ D
Sbjct: 69 AARVGGLF------SNMKYK---VEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPD 119
Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR--M 294
+P ET N P Y KR + L Y+ G + N YGP
Sbjct: 120 KTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDNY 179
Query: 295 CIDDGRVVSNFVAQ---ALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG-EHVGPF 349
+ DG V+ + + A++ + LT+ G GK R F + DL + + + E + P
Sbjct: 180 HLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSPL 239
Query: 350 --NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
++G E ++ ++A+++ E ++ K+ F + D +K+ + K L+
Sbjct: 240 ILSVGEEDEISIADVARLITEAMEFKGKLIFDTSKADGQYKKTASNLKLKSLV 292
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 74/316 (23%), Positives = 125/316 (39%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
R+ + G G VGS + +L RGD +V+ T + N++ + + HD
Sbjct: 5 RVFIAGHRGMVGSAIRRQLEQRGDVELVLR---TRDELNLL------DSRAV-HDFFASE 54
Query: 178 LLEVDQIYHLACPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 235
+DQ+Y A V P I N++ N++ A + + L +S +Y
Sbjct: 55 --RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP 112
Query: 236 DPLQHP--QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
+ P + E G + P Y K L Y+R G + R N YGP
Sbjct: 113 KLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 170
Query: 294 MCI--DDGRVVSNFV-----AQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH- 345
+ V+ + A A + V+G G R F V D+ + +ME H
Sbjct: 171 DNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHE 230
Query: 346 ---------VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRA 396
+ N+G + T+ ELAQ + + + ++ F + D ++ D++R
Sbjct: 231 VWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRL 290
Query: 397 KELLGWEPKVSLRKGL 412
+L GW ++SL GL
Sbjct: 291 HQL-GWYHEISLEAGL 305
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 114 (45.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 39/165 (23%), Positives = 66/165 (40%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVVEP 176
++VTGG G++GS L+ G V+V DN + E N + E + DV +
Sbjct: 6 VLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTDE 65
Query: 177 LLLE--------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGARFLL 227
+ +D + H A + P+ NV GT+ +L + + +
Sbjct: 66 AAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTNIVF 125
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD 272
+S++ VYGD + P + P+G + Y K E D
Sbjct: 126 SSSATVYGDATRFPDMIPIPEHC-PLGPTNPYGNTKFAIELAITD 169
Score = 72 (30.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 25/111 (22%), Positives = 47/111 (42%)
Query: 311 RKEPLTVYGD------GKQTRSFQFVSDLVEGLMRLME-----GEHVGPFNLGNPGEFTM 359
++E L V+GD G R + + DL +G ++ + V +NLG T+
Sbjct: 231 KREKLLVFGDDYASHDGTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTV 290
Query: 360 LELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRK 410
E+ + + + + E P D + +RA LGW+ + +L +
Sbjct: 291 YEMIRAFSKAVGRDLPYEVAPRRAGDVLNLTSNPTRANTELGWKAQRTLEQ 341
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 141 (54.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 75/340 (22%), Positives = 144/340 (42%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIV--------VDNFF-----TGRKENVMHHFGNPNF 166
++TG G VGS + D L+A D ++ +DN + +K+ + + + N
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65
Query: 167 ELIRHDVVEPLLLEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGAR- 224
+ E D I+HLA + P F+ P++T++TN++GT N+L + + A+
Sbjct: 66 YSSLQKLFESQ--RPDVIFHLAAQSYP-KTSFDIPIETLQTNIIGTANILENIRILKAKD 122
Query: 225 -----FLLTSTSEVYGDP---LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
+ S+SEVYG ++ + T+ G +P Y K + L Y
Sbjct: 123 GYDPVVHVCSSSEVYGRAKVGIKLNEDTTFHG-ASP------YSISKIGTDYLGRFYGEA 175
Query: 277 AGVEVRIARIFNTYGPRMC-IDDGRVVSNFVA--QALRKEPLTVYGDGKQTRSFQFVSDL 333
+ + R+ GPR + V+ +A + +EP+ G+ R+FQ D
Sbjct: 176 YNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDA 235
Query: 334 VEG--LMRLMEGEHVGP----FNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTED--- 384
+ L+ L + P FN+ F + E+ +++ + I+ + E
Sbjct: 236 IRAYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEILL-SFSTRKDIKIEQDEERLRP 294
Query: 385 -DPHKRKPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 423
D + D ++ K + W+P+++ RK ++ +R I
Sbjct: 295 IDADYQMFDNTKIKSFINWKPEIAARKMFEDLLNHWRDEI 334
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 67/280 (23%), Positives = 120/280 (42%)
Query: 165 NFELIRHDVVEPLLLEVDQIYHLAC-PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G 222
+ + I H +V D + H+A P + Y+ P++T TNV+GTL++L A+
Sbjct: 71 DLQAITHSMVG---FNPDVLIHMAAQPLVRLSYR-EPLETYATNVMGTLHVLEAARLCPN 126
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWG--NVNPIGVRSCYDEGKRTAETLTMDYHRG---- 276
R ++ T++ + +E WG P+G Y K E +T Y
Sbjct: 127 LRAIVNVTTDKC-----YENREWEWGYREDEPMGGHDPYSNSKGCVELITASYRNSFFNT 181
Query: 277 -AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE 335
+ AR N G +D R++ + + + +P+TV + TR +Q V + +
Sbjct: 182 PQAAALASARAGNVIGGGDWAED-RLIPDILRAFEKGQPVTVRNP-QATRPWQHVLEPLS 239
Query: 336 GLMRLME-----GEHVGP-FNLGNPGEFTMLELAQVVQETIDP-NAKIEFRPNTEDDPHK 388
G + L E G +N G P + + ++ +D ++ + + PH+
Sbjct: 240 GYLVLAEHLWKNGHQFAQGWNFG-PKDEDARPVEWILNYMVDSWGDGAHWQLDRDSHPHE 298
Query: 389 R---KPDISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFG 425
K DIS+A+ L W P +L K L ++V+ R + G
Sbjct: 299 ANYLKLDISKARARLNWAPTWNLEKTLSRIVQWHRAFLSG 338
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 71/266 (26%), Positives = 112/266 (42%)
Query: 172 DVVEPLLLEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKR----VG--AR 224
DV++P D++Y+LA S V F P T G L +L + G +
Sbjct: 103 DVIKP-----DEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVK 156
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
+ +SE++G PQ ET P RS Y K A T++Y G+
Sbjct: 157 YYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNG 210
Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQALRK-----EPLTVYGDGKQTRSFQFVSDLVEGLMR 339
+FN PR V+ + +AL + + G+ + +R + F D VE +
Sbjct: 211 ILFNHESPRR---GENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 267
Query: 340 LMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAK--IE-----FRPNTEDDPHKRKPD 392
+++ E + + T+ E V + N K +E FRP D+ + D
Sbjct: 268 MLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDN---LQGD 324
Query: 393 ISRAKELLGWEPKVSLRKGLPKMVKD 418
S+AKE+LGW+P+V K L KM+ D
Sbjct: 325 ASKAKEVLGWKPQVGFEK-LVKMMVD 349
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 123 (48.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 46/146 (31%), Positives = 68/146 (46%)
Query: 160 HFGNPNFELIRHDVVEP-----LLLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGT 211
H + NF+L D+ + +L EV D++Y+L S V F +P T + +GT
Sbjct: 53 HEEDVNFKLHYGDLTDSSNLTRILAEVQPDEVYNLGAQ-SHVAVSFQSPEYTADVDAIGT 111
Query: 212 LNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE 267
L +L + +G +F STSE+YG + PQKET P RS Y K A
Sbjct: 112 LRLLEAIRFLGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAY 166
Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPR 293
+T++Y G+ +FN PR
Sbjct: 167 WITINYRESYGIYACNGILFNHESPR 192
Score = 58 (25.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMV-KDFRQ 421
D S AK+ LGW P+++L++ + +MV D Q
Sbjct: 324 DPSLAKKELGWVPEITLQQMVSEMVASDLEQ 354
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 123 (48.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 46/146 (31%), Positives = 68/146 (46%)
Query: 160 HFGNPNFELIRHDVVEP-----LLLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGT 211
H + NF+L D+ + +L EV D++Y+L S V F +P T + +GT
Sbjct: 53 HEEDVNFKLHYGDLTDSSNLTRILAEVQPDEVYNLGAQ-SHVAVSFQSPEYTADVDAIGT 111
Query: 212 LNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE 267
L +L + +G +F STSE+YG + PQKET P RS Y K A
Sbjct: 112 LRLLEAIRFLGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAY 166
Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPR 293
+T++Y G+ +FN PR
Sbjct: 167 WITINYRESYGIYACNGILFNHESPR 192
Score = 58 (25.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMV-KDFRQ 421
D S AK+ LGW P+++L++ + +MV D Q
Sbjct: 324 DPSLAKKELGWVPEITLQQMVSEMVASDLEQ 354
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 70/294 (23%), Positives = 119/294 (40%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HFGNPNFELIRHDVVE 175
+R++VTGG+G VG ++R++ F + ++ N++ FE R V
Sbjct: 42 MRVLVTGGSGLVG-RAIERVVKEEGRGGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVI 100
Query: 176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
L V ++ + + N V I NV+ T N G+ K V ST ++
Sbjct: 101 HLAAMVGGLFRNM--RQNLDFWRNNV-FINDNVLQTANEFGVVKVVSC----LSTC-IFP 152
Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR-- 293
D +P ET N P Y KR + + G + N +G
Sbjct: 153 DKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILTNVFGAHDN 212
Query: 294 MCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVE-GLMRLMEGEHVGP 348
I+DG V+ + + +KE PL V+G GK R F + DL L L E + V P
Sbjct: 213 FNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDP 272
Query: 349 F--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
++G E ++ + A V + + N + + + D K+ ++ ++ L
Sbjct: 273 IILSVGEEDELSIKDCADAVVDALGFNGDVIYDTSKADGQFKKTASNAKLRQYL 326
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 128 (50.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 66/268 (24%), Positives = 111/268 (41%)
Query: 148 NFFTGRKE----NVMHHFGNPNFELIRHDVVEPLLL-------EVDQIYHLACPASPVHY 196
+F T R E N + H G+ +F L D+ + L E ++YHLA S V
Sbjct: 86 SFNTARIEHLYSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQ-SHVKV 144
Query: 197 KFN-PVKTIKTNVVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN 251
F+ P T + + VGTL +L A R+ RF STSE+YG + PQ E
Sbjct: 145 SFDLPEYTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEK-----T 199
Query: 252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQ-A 309
P RS Y K + ++Y + +FN PR R ++ VA+ +
Sbjct: 200 PFYPRSPYAVAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKIS 259
Query: 310 LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQET 369
L ++ G+ R + + VE + R+++ + F + +F++ E +
Sbjct: 260 LGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIATGKQFSVREFCNLAFAE 319
Query: 370 IDPNAKIEFRPNTEDDPHKRKPDISRAK 397
I +++ ++ K K + R K
Sbjct: 320 I--GEVLQWEGEGVEEVGKNKDGVIRVK 345
Score = 53 (23.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKD 418
+AK+ LGWE KV++ P++VK+
Sbjct: 365 KAKKTLGWEAKVTV----PELVKE 384
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 128 (50.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 66/268 (24%), Positives = 111/268 (41%)
Query: 148 NFFTGRKE----NVMHHFGNPNFELIRHDVVEPLLL-------EVDQIYHLACPASPVHY 196
+F T R E N + H G+ +F L D+ + L E ++YHLA S V
Sbjct: 86 SFNTARIEHLYSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQ-SHVKV 144
Query: 197 KFN-PVKTIKTNVVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN 251
F+ P T + + VGTL +L A R+ RF STSE+YG + PQ E
Sbjct: 145 SFDLPEYTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEK-----T 199
Query: 252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQ-A 309
P RS Y K + ++Y + +FN PR R ++ VA+ +
Sbjct: 200 PFYPRSPYAVAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGETFVTRKITRSVAKIS 259
Query: 310 LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQET 369
L ++ G+ R + + VE + R+++ + F + +F++ E +
Sbjct: 260 LGQQESIELGNLSALRDWGHAREYVEAMWRILQHDSPDDFVIATGKQFSVREFCNLAFAE 319
Query: 370 IDPNAKIEFRPNTEDDPHKRKPDISRAK 397
I +++ ++ K K + R K
Sbjct: 320 I--GEVLQWEGEGVEEVGKNKDGVIRVK 345
Score = 53 (23.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 395 RAKELLGWEPKVSLRKGLPKMVKD 418
+AK+ LGWE KV++ P++VK+
Sbjct: 365 KAKKTLGWEAKVTV----PELVKE 384
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 117 (46.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 75/292 (25%), Positives = 121/292 (41%)
Query: 84 YPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIV-VTGGAG-FVGSHLVDRLIARGD 141
Y ++T + A N G+ ++G G RK I +TG G ++ L+++
Sbjct: 8 YTLQTKRMADNQGNCSGSPSNGA----GKSRKVALITGITGQDGSYLAEFLLEKGYEVHG 63
Query: 142 SVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPLLL-----EVD--QIYHLACPA 191
V +F TGR E++ H N +L D+ + L EV +IY+L
Sbjct: 64 IVRRSSSFNTGRIEHLYKNPHAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ- 122
Query: 192 SPVHYKFNPVK-TIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETY 246
S V F+ + T + +GTL +L K G +F STSE+YG + PQKET
Sbjct: 123 SHVKISFDLAEYTADVDGLGTLRLLDATKTCGLINSVKFYQASTSELYGKVQEIPQKET- 181
Query: 247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNF 305
P RS Y K A + +++ + +FN PR + R +S
Sbjct: 182 ----TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRS 237
Query: 306 VAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
VA+ L + G+ R + D VE + +++ + F + GE
Sbjct: 238 VAKIHLGQMEFVSLGNLDAKRDWGHAKDYVEAMWLMLQTDEPEDFVIST-GE 288
Score = 64 (27.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMVK 417
D S+AK LGW PKVS + + +MV+
Sbjct: 346 DCSKAKNKLGWIPKVSFNELVKEMVE 371
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 78/297 (26%), Positives = 126/297 (42%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
R ++TG GF G ++ D L G + + +E + +R VVE +
Sbjct: 9 RALITGLEGFTGRYVADELRRSGYEIFGTRHSGADEREAGCFRVDICDLAALRR-VVEEV 67
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLA--KRVGARFLLTSTSEVY 234
EV + HLA + H + + + + NVVGT N+L LA R LL S++ VY
Sbjct: 68 EPEV--VVHLAAISFVAHGEADAI--YRANVVGTRNLLEALAGLSRTPRAVLLASSANVY 123
Query: 235 GD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
G+ P++ + N V E L M HR + + IAR FN G
Sbjct: 124 GNAPVELIDESVSLAPANDYAVSKLAME---YMARLWM--HR---LPIVIARPFNYTGVG 175
Query: 294 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPF-NLG 352
++ V+ R+ + G+ R F V + +RL+E G N+G
Sbjct: 176 QA--SHFLIPKIVSHFQRRASVIELGNLDVERDFSDVRVVALAYVRLLEVVPAGQVVNVG 233
Query: 353 NPGEFTMLELAQVVQETIDPNAKIEFRPNTE----DDPHKRKPDISRAKELLG-WEP 404
+ G+ L + I + +IE R N E ++ + + D+SR KEL+G ++P
Sbjct: 234 S-GQVVSLREVLAMMSGISGH-EIEVRVNPEFVRANEVKRLQGDVSRLKELIGGYQP 288
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 136 (52.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 63/253 (24%), Positives = 110/253 (43%)
Query: 117 LRIVVTGGAGFVGSHLVDRLI--ARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHD 172
+ +++TGG G++GSH V L+ + +++VDN + + + N I+ D
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKTVTFIKAD 60
Query: 173 VVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG-LAKRVGAR 224
V + LE ++ + H A + P+ + NV GT+ +L +AK
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKN 120
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNV-NPIGVRSCYDEGKRTAETLTMDYHRG-AGVEVR 282
+ +S++ VYG+ + P ET + NP Y + K E + D + A +
Sbjct: 121 LVFSSSATVYGNNVS-PLNETMATSATNP------YGQTKLMVEHVLFDLAKSDASWSIA 173
Query: 283 IARIFNTYGPRMC--IDDGR--VVSN---FVAQAL--RKEPLTVYGDGKQTRSFQFVSDL 333
R FN G I + + +N +VAQ R E L ++GD T+ V D
Sbjct: 174 CLRYFNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDY 233
Query: 334 VEGLMRLMEGEHV 346
+ ++ L +G HV
Sbjct: 234 IH-VVDLAQG-HV 244
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 114 (45.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 40/168 (23%), Positives = 74/168 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFGN-PNFELIRHDVV 174
+++TGG G++GS L+ V++VDN + + + G P F + D+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGKRPAFHNV--DIT 63
Query: 175 EPLLL--------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGARF 225
+ L E+D + H A + P++ + NV G++++L + K
Sbjct: 64 DEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCNI 123
Query: 226 LLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY 273
+ +S++ VYGD + P + PIG + Y K T E + D+
Sbjct: 124 VFSSSATVYGDATRVPNMIPIPEHC-PIGPTNTYGRTKSTIEDVISDH 170
Score = 65 (27.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 311 RKEPLTVYGD------GKQTRSFQFVSDLVEG----LMRLMEGEH-VGPFNLGNPGEFTM 359
++E L V+GD G R + V DL +G L L + + V +NLG+ T+
Sbjct: 229 QREKLLVFGDDYSSRDGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTV 288
Query: 360 LELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLR---KGLPKMV 416
E+ + + + E P + D + + A + LGW+ ++ + + L K V
Sbjct: 289 FEMIKAFSSVVGRDLPYEVVPRRQGDVLDLTANPALANKELGWKTELRMEDACQDLWKWV 348
Query: 417 KD 418
K+
Sbjct: 349 KN 350
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
+I+VTGG G++GSH V LI G +V+DNF + E++ + F + E
Sbjct: 4 KILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQIEFH 63
Query: 170 RHDVVE-PLLLEVDQIY------HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ P L ++ +++ H A + P++ + N+ GT+N+L + + G
Sbjct: 64 ELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMD 272
R L+ S+S VYGDP + P E + P+G + Y + K E + D
Sbjct: 124 VRNLVFSSSATVYGDPQKLPIDEQH-----PVGGCTNPYGKTKYFIEEMIRD 170
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 134 (52.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 70/294 (23%), Positives = 118/294 (40%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HFGNPNFELIRHDVVE 175
+R++VTGG+G VG ++R++ F + ++ N++ FE R V
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKEEGREGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVI 66
Query: 176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
L V ++ + + N V I NV+ T N G+ K V ST ++
Sbjct: 67 HLAAMVGGLFRNM--RQNLDFWRNNV-FINDNVLQTANEFGVVKVVSC----LSTC-IFP 118
Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR-- 293
D +P ET N P Y KR + + G N +G
Sbjct: 119 DKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPTNVFGAHDN 178
Query: 294 MCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVE-GLMRLMEGEHVGP 348
I+DG V+ + + +KE PL V+G GK R F + DL L L E + V P
Sbjct: 179 FNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDP 238
Query: 349 F--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
++G E ++ + A V + + N + + + D K+ ++ ++ L
Sbjct: 239 IILSVGEEDELSIKDCADAVVDALGFNGDVIYDTSKADGQFKKTASNAKLRQYL 292
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 51/192 (26%), Positives = 83/192 (43%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVM-------HHFGNPNFELI 169
+++VTGGAG++GSH V L+ G S +V+DNF R E+ M + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + H A + P+ + N+ GT+ +L + + G
Sbjct: 64 EMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-AGV 279
+ L+ S+S VYG+P P E + P G + Y + K E + D R
Sbjct: 124 VKSLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIQDLCRADTAW 178
Query: 280 EVRIARIFNTYG 291
+ R FN G
Sbjct: 179 NAVLLRYFNPIG 190
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 56/188 (29%), Positives = 83/188 (44%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFGNPNFELIRHDVV- 174
I+VTGGAG++GSH V +L+ G + +V+DN + V G+ L H V
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 175 --EPLLLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 226
+P L +V D + H A + P+ N++ T+ +L + G + L
Sbjct: 65 RDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKKL 124
Query: 227 LTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA- 284
+ S+S VYG P + P E +P+ S Y K E + D RG E RI
Sbjct: 125 VFSSSATVYGWPKEVPCTEE-----SPLSGMSPYGRTKLFIEDICRDVQRG-DPEWRIIM 178
Query: 285 -RIFNTYG 291
R FN G
Sbjct: 179 LRYFNPVG 186
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 74/287 (25%), Positives = 119/287 (41%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
G K+P + + ++I+VTG G++G+ L L+ RG SV + R+ + + P
Sbjct: 2 GPKMP-NTETENMKILVTGSTGYLGARLCHVLLRRGHSVRALV-----RRTSDLSDLP-P 54
Query: 165 NFELIRHDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 219
EL DV + L D ++H A P + +P + I NV G N+L K
Sbjct: 55 EVELAYGDVTDYRSLTDACSGCDIVFHAAALVEP--WLPDPSRFISVNVGGLKNVLEAVK 112
Query: 220 RVGA--RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 277
+ + TS+ G E N Y+ K A+ + ++ A
Sbjct: 113 ETKTVQKIIYTSSFFALGSTDGSVANENQVHNERFFCTE--YERSKAVADKMALN---AA 167
Query: 278 GVEVRIARIFNTYGPRMCIDDGRVVS-NFVAQALRKE---PLTVY-GDGKQTRSFQFVSD 332
V I ++ P + G++ S N VA+ L + L Y G G SF V D
Sbjct: 168 SEGVPIILLY----PGVIFGPGKLTSANMVARMLIERFNGRLPGYIGSGTDRYSFSHVDD 223
Query: 333 LVEGLMRLMEGEHVGPFNL--GNPGEFTML-ELAQVVQETIDPNAKI 376
+VEG + ME +G L G F ++ ++A ++ T PN I
Sbjct: 224 VVEGHVAAMEKGRLGERYLLTGENASFKLVFDMAALITGTKKPNFSI 270
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 133 (51.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 55/192 (28%), Positives = 86/192 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVMHHFGNPNFELIRHDV-VE 175
+++VTGGAG++GSH V L+ G S +V+DNF R E+ M EL V E
Sbjct: 3 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFE 62
Query: 176 PL-LLEVDQIYHLACPAS---PVHYKF---------NPVKTIKTNVVGTLNMLGLAKRVG 222
+ +L+ + HL S +H+ P+ + N+ GT+ +L + + G
Sbjct: 63 EMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHG 122
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRG-AGV 279
+ L+ S+S VYG+P P E + P G + Y + K E + D R
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCRADTAW 177
Query: 280 EVRIARIFNTYG 291
+ R FN G
Sbjct: 178 NAVLLRYFNPIG 189
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 111 (44.1 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 71/272 (26%), Positives = 113/272 (41%)
Query: 103 NSGGKIPLGLKRKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--- 158
NS GK P ++ L +TG G ++ L+++ V +F TGR E++
Sbjct: 14 NSSGK-P---RKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP 69
Query: 159 HHFGNPNFELIRHDVVEPLLL-----EVD--QIYHLACPASPVHYKFNPVK-TIKTNVVG 210
H N +L D+ + L EV +IY+L S V F+ + T + +G
Sbjct: 70 HAHTEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGLG 128
Query: 211 TLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA 266
TL +L K G +F STSE+YG + PQKET P RS Y K A
Sbjct: 129 TLRLLDATKTCGLINTVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYA 183
Query: 267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQT 324
+ +++ + +FN PR + R +S VA+ L + G+
Sbjct: 184 YWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMESFSLGNLDAK 243
Query: 325 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
R + D VE + +++ + F + GE
Sbjct: 244 RDWGHAKDYVEAMWLMLQTDEPEDFVIST-GE 274
Score = 65 (27.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
+RP TE D + D S+AK LGW PKVS + + +MV+
Sbjct: 321 YRP-TEVD--FLQGDCSQAKNKLGWTPKVSFDELVKEMVE 357
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 76/290 (26%), Positives = 119/290 (41%)
Query: 94 NPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFT 151
N R G G V + P K ++VTG F+G +L RL + VI VD
Sbjct: 5 NGRGGAGGVGGSSEHPQYPKV----VLVTGACRFLGGYLTARLAQNPLINRVIAVDAIAP 60
Query: 152 GRKENVMHHFGNPNFELIRHDVVEPLLL------EVDQIYHLACPASPVHYKFNPVKTIK 205
+ +++ G F +R D+ P + EVD + H A AS +
Sbjct: 61 SK--DMLRRMGRAEF--VRADIRNPFIAKVIRNGEVDTVVHAAA-ASYAPRSGGSAALKE 115
Query: 206 TNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGK 263
NV+G + + ++ + R +L STSEVYG P T R + +G
Sbjct: 116 LNVMGAMQLFAACQKAPSVRRVVLKSTSEVYGSSPHDPVMFT-----EDSSSRRPFSQGF 170
Query: 264 RTAETLTMD-YHRGAG-----VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV 317
++L ++ Y R G + V I R+ N GP M D +S ++A L P T+
Sbjct: 171 -PKDSLDIEGYVRALGRRRPDIAVTILRLANMIGPAM--DT--TLSRYLAGPL--VP-TI 222
Query: 318 YGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQ 367
+G + + D + L R G FN+G G +L L+Q ++
Sbjct: 223 FGRDARLQLLH-EQDALGALERAAMAGKAGTFNIGADG---ILMLSQAIR 268
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 68/268 (25%), Positives = 113/268 (42%)
Query: 148 NFFTGRKE----NVMHHFGNPNFELIRHDVVEPLLL-------EVDQIYHLACPASPVHY 196
+F T R E N + H G+ +F L D+ + L E +IYHLA S V
Sbjct: 69 SFNTARIEHLYGNPVTHNGSASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQ-SHVKV 127
Query: 197 KFN-PVKTIKTNVVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN 251
F+ P T + + VGTL +L A R+ RF STSE+YG + PQ E +
Sbjct: 128 SFDLPEYTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE-----LT 182
Query: 252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQ-A 309
P RS Y K + ++Y + +FN PR R ++ VA+ +
Sbjct: 183 PFYPRSPYAVAKMYGYWIVVNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKIS 242
Query: 310 LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQET 369
LR++ G+ R + + VE + R+++ + F + +F++ E +
Sbjct: 243 LRQQEHIELGNLSALRDWGHAKEYVEAMWRILQQDTPDDFVIATGKQFSVREFCNLAFAE 302
Query: 370 IDPNAKIEFRPNTEDDPHKRKPDISRAK 397
I ++ + D+ K + + R K
Sbjct: 303 I--GEQLVWEGEGVDEVGKNQDGVVRVK 328
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 68/268 (25%), Positives = 113/268 (42%)
Query: 148 NFFTGRKE----NVMHHFGNPNFELIRHDVVEPLLL-------EVDQIYHLACPASPVHY 196
+F T R E N + H G+ +F L D+ + L E +IYHLA S V
Sbjct: 69 SFNTARIEHLYGNPVTHNGSASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQ-SHVKV 127
Query: 197 KFN-PVKTIKTNVVGTLNMLGL--AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN 251
F+ P T + + VGTL +L A R+ RF STSE+YG + PQ E +
Sbjct: 128 SFDLPEYTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE-----LT 182
Query: 252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQ-A 309
P RS Y K + ++Y + +FN PR R ++ VA+ +
Sbjct: 183 PFYPRSPYAVAKMYGYWIVVNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKIS 242
Query: 310 LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQET 369
LR++ G+ R + + VE + R+++ + F + +F++ E +
Sbjct: 243 LRQQEHIELGNLSALRDWGHAKEYVEAMWRILQQDTPDDFVIATGKQFSVREFCNLAFAE 302
Query: 370 IDPNAKIEFRPNTEDDPHKRKPDISRAK 397
I ++ + D+ K + + R K
Sbjct: 303 I--GEQLVWEGEGVDEVGKNQDGVVRVK 328
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
+++VTGGAG++GSH V L+ G S +V+DNF + E++ + + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-VDQIYHLACPASPVHYKF------NPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + + YH K P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGAGV- 279
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKAW 178
Query: 280 EVRIARIFNTYGPRM--CI-DDGRVVSN 304
+ R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPIGAHASGCIGEDPQGIPN 206
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 66/262 (25%), Positives = 110/262 (41%)
Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
I+VTGGAG +GS+++ L RG ++VVD+ GRK + ++ + R D + +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADY-MDRDDFLAQI 60
Query: 178 LLE-----VDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS 231
+ +D I+H AC A+ +++ + N + +L FL S++
Sbjct: 61 MAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASSA 117
Query: 232 EVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
YG+ ++ Y G +N G + +D R L H ++ R FN Y
Sbjct: 118 ATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVRRL-WLDAKQHDETLSQITGFRYFNVY 176
Query: 291 GPRMCIDDGRVVSNFVAQALRKE------PLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE 344
GPR G + S VA L + P G R F +V D+ + ++
Sbjct: 177 GPREQ-HKGSMAS--VAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLDHG 233
Query: 345 HVGPFNLGNPGEFTMLELAQVV 366
G FN G + E+A+ V
Sbjct: 234 VSGIFNCGTGKAESFNEVAKAV 255
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 66/262 (25%), Positives = 110/262 (41%)
Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
I+VTGGAG +GS+++ L RG ++VVD+ GRK + ++ + R D + +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADY-MDRDDFLAQI 60
Query: 178 LLE-----VDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS 231
+ +D I+H AC A+ +++ + N + +L FL S++
Sbjct: 61 MAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASSA 117
Query: 232 EVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
YG+ ++ Y G +N G + +D R L H ++ R FN Y
Sbjct: 118 ATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVRRL-WLDAKQHDETLSQITGFRYFNVY 176
Query: 291 GPRMCIDDGRVVSNFVAQALRKE------PLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE 344
GPR G + S VA L + P G R F +V D+ + ++
Sbjct: 177 GPREQ-HKGSMAS--VAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLDHG 233
Query: 345 HVGPFNLGNPGEFTMLELAQVV 366
G FN G + E+A+ V
Sbjct: 234 VSGIFNCGTGKAESFNEVAKAV 255
>UNIPROTKB|F1NYB5 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 OMA:ASVHVMN
GO:GO:0042350 EMBL:AADN02037342 IPI:IPI00585390
Ensembl:ENSGALT00000025982 Uniprot:F1NYB5
Length = 260
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 213 NMLGLAKRVGARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM 271
N+L A G + +++ S ++ D +P ET N P Y KR +
Sbjct: 35 NVLHSAYECGVQKVVSCLSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNR 94
Query: 272 DYHRGAGVEVRIARIFNTYGPR--MCIDDGRVVSNFVAQA-LRKE---PLTVYGDGKQTR 325
Y G N +GP I+DG V+ + + L K+ LTV+G GK R
Sbjct: 95 GYFEQHGCRFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVYLAKQNGSALTVWGTGKPRR 154
Query: 326 SFQFVSDLVEGLMRLM-EGEHVGPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNT 382
F + DL + ++ E E V P ++G E ++ E A+ + E +D ++ F
Sbjct: 155 QFIYSLDLARLFVWVLREYEEVEPIILSVGEEDEVSIREAAEAIVEAMDFRGELIFDTTK 214
Query: 383 EDDPHKRKPDISRAKELL 400
D K+ ++ + L
Sbjct: 215 ADGQFKKTASNAKLRHYL 232
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 117 (46.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 56/224 (25%), Positives = 93/224 (41%)
Query: 119 IVVTGGAGFVGSHLVDRLIA--RGDSVIVVDNFFT-GRKENVMHHFGN-PNFE-LIR-HD 172
++V GG GF+GSH+V L+ + +V VD T R+E V +H + N E L+ D
Sbjct: 13 VLVVGGCGFLGSHIVRMLLDDYKCSAVSAVDLRCTRNRREGVQYHDADITNAERLVSVFD 72
Query: 173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTS 231
V P D + H A P + + + K NV GT ++ K+ G + L+ TS++
Sbjct: 73 EVRP-----DVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAGVKALVFTSSA 127
Query: 232 EVYGDPLQHP-QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
V D + + W + Y + K AE + + + + R +
Sbjct: 128 SVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPGKLLTAAIRPSGIF 187
Query: 291 GPRMCIDDGRVVSNFVAQALRKEPLTVY-GDGKQTRSFQFVSDL 333
G D V +N V + R+ V GD F + ++
Sbjct: 188 GE----GDSMVTANLV-KTYREGKWKVQVGDNNNLFDFTYAGNV 226
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFGDHKEGG 431
+I++AK+ LG+ P VS+ +G+ + V Q I KE G
Sbjct: 332 NITKAKQRLGYAPIVSMEEGVRRGV----QYILDQEKETG 367
>UNIPROTKB|K7GMD9 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 EMBL:CU468868
Ensembl:ENSSSCT00000033816 Uniprot:K7GMD9
Length = 215
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
K + V GG+GF+G H+V++L+ RG +V V D V G +L +
Sbjct: 24 KDRKCTVIGGSGFLGQHMVEQLLERGYAVNVFDKRQGFDNPRVQFFLG----DLCNQQDL 79
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
P L V ++H A PA + N + N +GT N++ + G + +LTS++ V
Sbjct: 80 YPALKGVSTVFHCASPAPSSN---NKELFYRVNYIGTKNVIETCREAGVQKLILTSSASV 136
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 49/185 (26%), Positives = 84/185 (45%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG------RKENVM-HHFGNPNFELIRH 171
I+VTGGAG++GSH V LI+ G V++VDN R E ++ H + ++ +
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 172 DVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
+ + + + + + H A + P+ NV GT+N+L + K + ++ S
Sbjct: 66 EQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTIVFS 125
Query: 230 TSE-VYGDPLQHPQKETYWGNVN-PIGVRSCYDEGKRTAETLTMD-YHRGAGVEVRIARI 286
+S VYGD + + P+ + Y K E++ D Y+ +V I R
Sbjct: 126 SSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRY 185
Query: 287 FNTYG 291
FN G
Sbjct: 186 FNPIG 190
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 49/185 (26%), Positives = 84/185 (45%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG------RKENVM-HHFGNPNFELIRH 171
I+VTGGAG++GSH V LI+ G V++VDN R E ++ H + ++ +
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 172 DVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
+ + + + + + H A + P+ NV GT+N+L + K + ++ S
Sbjct: 66 EQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTIVFS 125
Query: 230 TSE-VYGDPLQHPQKETYWGNVN-PIGVRSCYDEGKRTAETLTMD-YHRGAGVEVRIARI 286
+S VYGD + + P+ + Y K E++ D Y+ +V I R
Sbjct: 126 SSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRY 185
Query: 287 FNTYG 291
FN G
Sbjct: 186 FNPIG 190
>WB|WBGene00012394 [details] [associations]
symbol:hsd-1 species:6239 "Caenorhabditis elegans"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0016616 "oxidoreductase activity, acting
on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IGI] [GO:0016126 "sterol biosynthetic process"
evidence=IMP] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0002119 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0016126
EMBL:AL032655 PIR:T27323 RefSeq:NP_493402.1 UniGene:Cel.28002
ProteinModelPortal:Q9XWF0 EnsemblMetazoa:Y6B3B.11 GeneID:189371
KEGG:cel:CELE_Y6B3B.11 UCSC:Y6B3B.11 CTD:189371 WormBase:Y6B3B.11
HOGENOM:HOG000020706 InParanoid:Q9XWF0 OMA:VLRFNGI NextBio:942172
Uniprot:Q9XWF0
Length = 462
Score = 113 (44.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 50/200 (25%), Positives = 83/200 (41%)
Query: 143 VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVK 202
+++VD R + HH ++ L +VD +YHLA Y +
Sbjct: 106 IVLVD-VLEPRGRVLKHHVAFVKCSFDDECTMKTALEQVDTVYHLAAVGMTGQYARDRKA 164
Query: 203 TIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY--GDPLQHPQKETYWGNVNPIGVRSCY 259
+ N VGT+N+L A+ G RF+ TS+ V G+P+ + +E + P + Y
Sbjct: 165 CMDINAVGTMNLLIWARNSGVQRFIYTSSVGVVFSGEPMYNATEEVGY----PDDFYNYY 220
Query: 260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG 319
E K AE + G + + R YGP RVV F+ + G
Sbjct: 221 CESKAHAERIVQKAS-GHRMRTTVLRFNGIYGPGEKRVTERVVK-FMLTGMWIATCKPNG 278
Query: 320 DGKQTRSFQFVSDLVEGLMR 339
QT+ V++ ++GL++
Sbjct: 279 VEAQTQ-LSSVANCIQGLVK 297
Score = 49 (22.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 118 RIVVTGGAGFVGSHLVDRL 136
++++TGGAG + +LV +L
Sbjct: 46 KVLITGGAGHLAENLVAKL 64
Score = 49 (22.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMVKDFRQRI 423
+I +A+ LG+EP VS +P++++ + R+
Sbjct: 383 NIEKAERDLGYEPSVS---AIPEIIEHYLHRL 411
>FB|FBgn0036997 [details] [associations]
symbol:CG5955 species:7227 "Drosophila melanogaster"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF EMBL:AY058410
RefSeq:NP_649230.1 UniGene:Dm.4281 SMR:Q9VPE8 STRING:Q9VPE8
EnsemblMetazoa:FBtr0078197 GeneID:40268 KEGG:dme:Dmel_CG5955
UCSC:CG5955-RA FlyBase:FBgn0036997 InParanoid:Q9VPE8
OrthoDB:EOG4VT4CZ GenomeRNAi:40268 NextBio:817884 Uniprot:Q9VPE8
Length = 367
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 78/317 (24%), Positives = 136/317 (42%)
Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRK--ENVMHHFGNP-NFELIRHD 172
+I++TGG G +G L + +VI+ D + EN + F + +F+ ++
Sbjct: 47 KILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLENGPYIFADILDFKGLQKI 106
Query: 173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
VV+ +D + H + S V + P+ ++ N+ G N++ LAK+ R + ST
Sbjct: 107 VVDH---RIDWLIHFSALLSAVGEQNVPL-AVRVNIEGVHNVIELAKQYKLRIFVPSTIG 162
Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR---IFNT 289
+G P P+ T NV R+ Y K AE + Y+ G++ R R + ++
Sbjct: 163 AFG-P-DSPRNPT--PNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCLRFPGVISS 218
Query: 290 YGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG--EHVG 347
P D V+ F +ALR T Y ++ D + L+ M E +
Sbjct: 219 DPPGGGTTD-YAVAVF-HEALRNGKYTCYLRPDTRLPMMYIEDCLRALLEFMRAPNEQLK 276
Query: 348 P--FNLGNPGEFTMLEL-AQVVQETIDPNAKIEFRPNTED---DPHKRKPDISRAKELLG 401
+N+ FT EL AQ+ + PN + ++P++ D + D S A+
Sbjct: 277 RRVYNV-TAMSFTPEELFAQLGKHV--PNLHVTYKPDSRQLIADAWPQVFDDSDARRDWH 333
Query: 402 WEPKVSLRKGLPKMVKD 418
W+ K L + M+KD
Sbjct: 334 WQHKYDLSNLVDFMIKD 350
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 114 (45.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 51/221 (23%), Positives = 100/221 (45%)
Query: 120 VVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
+V GG GF+G ++V+ L+ARG+ +V V D + + V H G ++ + + +E
Sbjct: 6 LVVGGCGFLGRYIVESLLARGEKNVHVFDIRKSFEDDRVTFHIG----DIRKTEDLESAC 61
Query: 179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTSEVY--G 235
+ ++H A P + Y NV+GT ++ + G + L+ TS+S V G
Sbjct: 62 KGITTVFHTASPTHGMGYDIY----YSVNVIGTERLIEACIKCGVKQLVYTSSSSVVFNG 117
Query: 236 -DPLQHPQKETYWG-NVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
D + + Y +++P Y++ K E + +G+ + V R +GPR
Sbjct: 118 KDIVNGDETLPYVDKHIDP------YNKTKELGERAVLKA-KGSNLLVCALRPAGIFGPR 170
Query: 294 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
+ + F+ A + ++GDG + ++ ++V
Sbjct: 171 ----EVQGWPQFLKAAKEGKNKFMFGDGNNLCDWTYIDNVV 207
Score = 55 (24.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMVKDFRQR 422
+I +AK+ L ++P VSLR G+ K + F Q+
Sbjct: 302 NIEKAKKELKYKPIVSLRDGMEKTKEWFLQQ 332
>WB|WBGene00019813 [details] [associations]
symbol:ger-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose
reductase activity" evidence=IEA] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 KO:K02377 GO:GO:0050577 OMA:IHCAGRV HSSP:P32055
GeneTree:ENSGT00390000004681 EMBL:FO081121 EMBL:AM231686 PIR:T16645
RefSeq:NP_498540.1 UniGene:Cel.10235 ProteinModelPortal:G5EER4
SMR:G5EER4 EnsemblMetazoa:R01H2.5 GeneID:187512
KEGG:cel:CELE_R01H2.5 CTD:187512 WormBase:R01H2.5 NextBio:935530
Uniprot:G5EER4
Length = 315
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 70/285 (24%), Positives = 111/285 (38%)
Query: 119 IVVTGGAGFVGSHL---VDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN--FELIRHDV 173
I+VTGG G VGS + V+ R D V F G K+ + + FE ++
Sbjct: 4 ILVTGGTGLVGSAIKKVVETTEKRDDEKWV----FIGSKDCDLENLEETRELFESVKPTH 59
Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV 233
V L V ++H A + + F I NV+ + + K V ST +
Sbjct: 60 VIHLAAMVGGLFHNL--AHNLQF-FRKNMAINDNVLALCHEFDVIKCVSC----LSTC-I 111
Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
+ D +P ET P Y KR + L Y + G + N +GP
Sbjct: 112 FPDKTSYPIDETMVHLGPPHDSNFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGPH 171
Query: 294 --MCIDDGRVVSNFVAQALRKE----PLTVYGDGKQTRSFQFVSDLVEGLMRLM-EGEHV 346
+ G V+ + +A + PL VYG G R F + DL +R++ E E V
Sbjct: 172 DNYNLQSGHVLPALIHKAYVAQRDGTPLQVYGSGTPLRQFIYSIDLARLFIRVVREYEDV 231
Query: 347 GPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKR 389
P ++ E ++ + V + ID +E+ + D K+
Sbjct: 232 EPIILSVNESDEVSIRDAVSAVVKAIDFTGDVEYDTSKADGQFKK 276
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/137 (27%), Positives = 66/137 (48%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVM-------HHFGNPNFELI 169
+++VTGGAG++GSH V L+ G S +V+DNF R E+ M + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + H A + P+ + N+ GT+ +L + + +G
Sbjct: 64 EMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMG 123
Query: 223 ARFLLTSTSE-VYGDPL 238
+ L+ S+S VYG P+
Sbjct: 124 VKSLVFSSSATVYGKPV 140
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 69/294 (23%), Positives = 116/294 (39%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HFGNPNFELIRHDVVE 175
+R++VTGG+G VG ++R++ F + + N++ F+ R V
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKDEGREGEEWTFLSSKDANLLSAEETRAIFQKYRPTHVI 66
Query: 176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
L V ++ + + N V I NV+ T N G+ K V ST ++
Sbjct: 67 HLAAMVGGLFRNM--RQNLDFWRNNV-FINDNVLQTANEFGVVKVVSC----LSTC-IFP 118
Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR-- 293
D +P ET N P Y KR + + G N +G
Sbjct: 119 DKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPTNVFGAHDN 178
Query: 294 MCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVE-GLMRLMEGEHVGP 348
IDDG V+ + + +KE PL V+G GK R F + DL L L E + V P
Sbjct: 179 FNIDDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDP 238
Query: 349 F--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
++G E ++ + A V + + + + + D K+ ++ ++ L
Sbjct: 239 IILSVGEEDELSIKDCADAVVDALGFKGDVIYDTSKADGQFKKTASNAKLRQYL 292
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 125 (49.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 52/210 (24%), Positives = 88/210 (41%)
Query: 179 LEVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEV 233
++ D++Y+L S V F P T + +GTL +L + +G +F STSE+
Sbjct: 80 VQPDEVYNLGAQ-SHVAVSFECPEYTADVDAIGTLRLLEAIRFLGLEKKTKFYQASTSEL 138
Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
YG+ + PQ ET P RS Y K A + ++Y G+ +FN PR
Sbjct: 139 YGEVQEIPQSET-----TPFHPRSPYAVAKMYAYWIVVNYRESYGMYACNGILFNHESPR 193
Query: 294 -----MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP 348
+ R ++N +AQ L E G+ R + D V +++ EH
Sbjct: 194 RGETFVTRKITRAIAN-IAQGL--ESCLYLGNMDALRDWGHAKDYVRMQWMMLQQEHPDD 250
Query: 349 FNLGNPGEFTMLELAQVVQETIDPNAKIEF 378
F + + ++ E V ++ ++ F
Sbjct: 251 FVIATGKQISVREF--VTLSALEAGIELTF 278
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 75/318 (23%), Positives = 130/318 (40%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
++I++TG G VG ++++ L ++ + + + N++ + L+ H +P
Sbjct: 1 MKILLTGANGMVGKNILE-LASKHQHTFLTPS---SKVLNLLDAASTQAY-LVEH---KP 52
Query: 177 LLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVY 234
D I H A + +PVK + N+ LN+L AK G + FL S+S +Y
Sbjct: 53 -----DMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMY 107
Query: 235 GDPLQHPQKETYW--GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF--NTY 290
+P E G + P Y K A T +Y E+ I N Y
Sbjct: 108 PRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPCNLY 164
Query: 291 G--PRMCIDDGRVVSNFVAQAL--RKEPLT---VYGDGKQTRSFQFVSDLVEGLMRLMEG 343
G + + ++ + + + +++ LT ++GDGK R F + DL + + +
Sbjct: 165 GRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYAIAN 224
Query: 344 EHVGPFNLG-NPGE-FTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLG 401
P NL GE FT+ + Q + E I + + T+ K+K G
Sbjct: 225 FSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFK-HDLTKPVGMKQKLIDDNKLNAFG 283
Query: 402 WEPKVSLRKGLPKMVKDF 419
W K L +GL V+ F
Sbjct: 284 WSYKTDLTEGLKNTVQFF 301
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 75/318 (23%), Positives = 130/318 (40%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
++I++TG G VG ++++ L ++ + + + N++ + L+ H +P
Sbjct: 1 MKILLTGANGMVGKNILE-LASKHQHTFLTPS---SKVLNLLDAASTQAY-LVEH---KP 52
Query: 177 LLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVY 234
D I H A + +PVK + N+ LN+L AK G + FL S+S +Y
Sbjct: 53 -----DMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMY 107
Query: 235 GDPLQHPQKETYW--GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF--NTY 290
+P E G + P Y K A T +Y E+ I N Y
Sbjct: 108 PRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPCNLY 164
Query: 291 G--PRMCIDDGRVVSNFVAQAL--RKEPLT---VYGDGKQTRSFQFVSDLVEGLMRLMEG 343
G + + ++ + + + +++ LT ++GDGK R F + DL + + +
Sbjct: 165 GRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYAIAN 224
Query: 344 EHVGPFNLG-NPGE-FTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLG 401
P NL GE FT+ + Q + E I + + T+ K+K G
Sbjct: 225 FSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFK-HDLTKPVGMKQKLIDDNKLNAFG 283
Query: 402 WEPKVSLRKGLPKMVKDF 419
W K L +GL V+ F
Sbjct: 284 WSYKTDLTEGLKNTVQFF 301
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 112 (44.5 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 49/201 (24%), Positives = 85/201 (42%)
Query: 178 LLEVDQIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAKRVG----ARFLLTSTSE 232
+++ +IY+LA S V F+ + T + + VGTL +L + G RF STSE
Sbjct: 122 MVKPTEIYNLAAQ-SHVKVSFDLSEYTAEVDAVGTLRILDAIRTCGMEKNVRFYQASTSE 180
Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
+YG ++ PQ E P RS Y K + ++Y + +FN P
Sbjct: 181 LYGKVVETPQNEQ-----TPFYPRSPYACAKMYGFWIVINYREAYNMYACNGILFNHESP 235
Query: 293 RMCIDD-GRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFN 350
R + R ++ VA+ K+ G+ R + SD VE + +++ E +
Sbjct: 236 RRGENFVTRKITRSVAKIYHKQMEYFELGNLDSKRDWGHASDYVEAMWMMLQRESPSDYV 295
Query: 351 LGNPGEFTMLELAQVVQETID 371
+ ++ E + + ID
Sbjct: 296 IATGETHSVREFVEAAFKHID 316
Score = 55 (24.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 365 VVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
+V+ I+P FRP TE D + D S+A L W PKV+ + + M+K
Sbjct: 337 IVRVRINPKY---FRP-TEVD--LLQGDASKANRELNWTPKVTFVELVSDMMK 383
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 68/301 (22%), Positives = 117/301 (38%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
+++VTGG G VG L + + S FF G K+ + + R +P
Sbjct: 3 KVLVTGGTGLVGKAL--EAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFARE---KPT 57
Query: 178 LLEVDQIYHLACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYG 235
+ HLA + H N + ++ N++ N+L A G +++ S ++
Sbjct: 58 -----HVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFP 112
Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG---VEVRIARIF---NT 289
D +P ET N P Y KR + YH G V IF +
Sbjct: 113 DKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDN 172
Query: 290 YGPRMC-IDDGRV--VSNFVAQAL----RKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
Y P + + G + + V + + TV+G G R F + DL E ++ ++
Sbjct: 173 YNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLR 232
Query: 343 G-EHVGPFNLG--NPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKEL 399
E V P L E T+ E+AQ V + + N ++ + D +K+ ++ +
Sbjct: 233 NYESVEPIILSADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSF 292
Query: 400 L 400
L
Sbjct: 293 L 293
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 117 (46.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---FTGR---KENV--MHHFGNPNFELI 169
+++VTGGAG++GSH V L+ G +V+DNF F G E++ + + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + H A + P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETY 246
+ L+ S+S VYG+P P E +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 117 (46.2 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 40/145 (27%), Positives = 69/145 (47%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---FTGR---KENV--MHHFGNPNFELI 169
+++VTGGAG++GSH V L+ G +V+DNF F G E++ + + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + H A + P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETY 246
+ L+ S+S VYG+P P E +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 52/208 (25%), Positives = 92/208 (44%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT---GR---KENV--MHHFGNPNFELI 169
+++VTGGAG++GSH V L+ G S +V+DNF G+ E++ + + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + H A + P+ + N+ G++ +L + + G
Sbjct: 64 EMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMRAHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGAGV- 279
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKYFIEEMIRDLCQADKAW 178
Query: 280 EVRIARIFNTYGPRM--CI-DDGRVVSN 304
+ R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPIGAHASGCIGEDPQGIPN 206
>TAIR|locus:2123797 [details] [associations]
symbol:SQD1 "sulfoquinovosyldiacylglycerol 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0008146 "sulfotransferase
activity" evidence=IDA] [GO:0009247 "glycolipid biosynthetic
process" evidence=IDA] [GO:0046506 "sulfolipid biosynthetic
process" evidence=IDA] [GO:0046507 "UDPsulfoquinovose synthase
activity" evidence=IDA] [GO:0016036 "cellular response to phosphate
starvation" evidence=IEP;IMP;RCA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0008270 GO:GO:0009247 GO:GO:0016036 EMBL:AL031804
EMBL:AL161582 GO:GO:0008146 EMBL:AF022082 EMBL:AF380641
EMBL:AY113071 IPI:IPI00524549 PIR:T05311 RefSeq:NP_195029.1
UniGene:At.2479 PDB:1I24 PDB:1I2B PDB:1I2C PDB:1QRR PDBsum:1I24
PDBsum:1I2B PDBsum:1I2C PDBsum:1QRR ProteinModelPortal:O48917
SMR:O48917 IntAct:O48917 STRING:O48917 PaxDb:O48917 PRIDE:O48917
ProMEX:O48917 EnsemblPlants:AT4G33030.1 GeneID:829440
KEGG:ath:AT4G33030 TAIR:At4g33030 HOGENOM:HOG000014371
InParanoid:O48917 KO:K06118 OMA:QMTETHR PhylomeDB:O48917
ProtClustDB:PLN02572 BioCyc:MetaCyc:MONOMER-1201
EvolutionaryTrace:O48917 Genevestigator:O48917 GermOnline:AT4G33030
GO:GO:0046507 Uniprot:O48917
Length = 477
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 299 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-MRLMEGEHVGPFNLGNP--G 355
G ++ F QA PLTVYG G QTR + + D V+ + + + G F + N
Sbjct: 320 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 379
Query: 356 EFTMLELAQVVQET-----IDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKV---S 407
+F++ ELA +V + +D P E + H ++ EL G EP S
Sbjct: 380 QFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMEL-GLEPHYLSDS 438
Query: 408 LRKGLPKMVKDFRQRI 423
L L F+ R+
Sbjct: 439 LLDSLLNFAVQFKDRV 454
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 180 EVDQIYHL----ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS--TSEV 233
E D + H + P S + + V T NV+GTLN+L K G L T
Sbjct: 173 EPDSVVHFGEQRSAPYSMID-RSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE 231
Query: 234 YGDP 237
YG P
Sbjct: 232 YGTP 235
Score = 49 (22.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN 148
K R++V GG G+ G L + V +VDN
Sbjct: 83 KPKRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 116
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 110 (43.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 56/210 (26%), Positives = 88/210 (41%)
Query: 156 NVMHHFGNPNFELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTL 212
N+ H+G +L + ++ EV +IY+L S V F+ + T + VGTL
Sbjct: 57 NMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTL 111
Query: 213 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET 268
+L K G RF STSE+YG + PQKET P RS Y K A
Sbjct: 112 RLLDAVKTCGLIGSVRFYQASTSELYGKVQETPQKET-----TPFYPRSPYGAAKLYAYW 166
Query: 269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRS 326
+ +++ + +FN PR + R +S VA+ L + G+ R
Sbjct: 167 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 226
Query: 327 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
+ D VE + +++ + F + GE
Sbjct: 227 WGHAKDYVEAMWLMLQSDEPEDFVIAT-GE 255
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
+RP TE D + D ++AK+ L W+P+V + + +MV
Sbjct: 302 YRP-TEVD--FLQGDCTKAKQKLNWKPRVGFDELVREMV 337
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 52/208 (25%), Positives = 91/208 (43%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
+++VTGGAG++GSH V L+ G S +V+DNF + E++ + + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + H A + P+ + N+ GT+ +L + + G
Sbjct: 64 EMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGAGV- 279
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKAW 178
Query: 280 EVRIARIFNTYGPRM--CI-DDGRVVSN 304
+ R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPIGAHASGCIGEDPQGIPN 206
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 70/277 (25%), Positives = 112/277 (40%)
Query: 99 FGAVNSGGKIPLGLKRKGLRIV-VTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKEN 156
F + G +G R I +TG G ++ L+++ V +F TGR E+
Sbjct: 8 FPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH 67
Query: 157 VM-----HHFGNPNF---ELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIK 205
+ H GN +L + ++ EV +IY+L S V F+ + T
Sbjct: 68 LYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTAD 126
Query: 206 TNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE 261
+ VGTL +L K G +F STSE+YG + PQKET P RS Y
Sbjct: 127 VDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGA 181
Query: 262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYG 319
K A + +++ + +FN PR + R +S VA+ L + G
Sbjct: 182 AKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 241
Query: 320 DGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
+ R + D VE + +++ + F + GE
Sbjct: 242 NLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIAT-GE 277
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
+RP TE D + D ++AK+ L W+P+V + + +MV
Sbjct: 324 YRP-TEVD--FLQGDCTKAKQKLNWKPRVPFDELVREMV 359
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 109 (43.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 72/273 (26%), Positives = 112/273 (41%)
Query: 103 NSGGKIPLGLKRKGLRIV-VTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-- 158
NSG G RK I +TG G ++ L+++ V +F TGR E++
Sbjct: 13 NSGDG-DKGKPRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN 71
Query: 159 ---HHFGNPNF---ELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVV 209
H GN +L + ++ EV +IY+L S V F+ + T + V
Sbjct: 72 PQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGV 130
Query: 210 GTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRT 265
GTL +L K G +F STSE+YG + PQKET P RS Y K
Sbjct: 131 GTLRLLDAIKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLY 185
Query: 266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQ 323
A + +++ + +FN PR + R +S VA+ L + G+
Sbjct: 186 AYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDA 245
Query: 324 TRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
R + D VE + +++ + F + GE
Sbjct: 246 KRDWGHAKDYVEAMWLMLQNDEPEDFVIAT-GE 277
Score = 53 (23.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
+RP TE D + D S+A++ L W+P+V+ + + +MV+
Sbjct: 324 YRP-TEVD--FLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 109 (43.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 67/263 (25%), Positives = 109/263 (41%)
Query: 112 LKRKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-----HHFGNPN 165
L++ L +TG G ++ L+++ V +F TGR E++ H GN
Sbjct: 22 LRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 166 F---ELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAK 219
+L + ++ EV +IY+L S V F+ + T + VGTL +L K
Sbjct: 82 LHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDAIK 140
Query: 220 RVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 275
G +F STSE+YG + PQKET P RS Y K A + +++
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 276 GAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDL 333
+ +FN PR + R +S VA+ L + G+ R + D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 334 VEGLMRLMEGEHVGPFNLGNPGE 356
VE + +++ + F + GE
Sbjct: 256 VEAMWLMLQNDEPEDFVIAT-GE 277
Score = 53 (23.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
+RP TE D + D S+A++ L W+P+V+ + + +MV+
Sbjct: 324 YRP-TEVD--FLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 109 (43.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 67/263 (25%), Positives = 109/263 (41%)
Query: 112 LKRKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-----HHFGNPN 165
L++ L +TG G ++ L+++ V +F TGR E++ H GN
Sbjct: 22 LRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMK 81
Query: 166 F---ELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAK 219
+L + ++ EV +IY+L S V F+ + T + VGTL +L K
Sbjct: 82 LHYGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDAIK 140
Query: 220 RVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR 275
G +F STSE+YG + PQKET P RS Y K A + +++
Sbjct: 141 TCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFRE 195
Query: 276 GAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDL 333
+ +FN PR + R +S VA+ L + G+ R + D
Sbjct: 196 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 255
Query: 334 VEGLMRLMEGEHVGPFNLGNPGE 356
VE + +++ + F + GE
Sbjct: 256 VEAMWLMLQNDEPEDFVIAT-GE 277
Score = 53 (23.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
+RP TE D + D S+A++ L W+P+V+ + + +MV+
Sbjct: 324 YRP-TEVD--FLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 109 (43.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 53/225 (23%), Positives = 93/225 (41%)
Query: 154 KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVK-TIKTNVVGTL 212
KE++ H+G+ H +V + +IY+L S V F+ + T + +G L
Sbjct: 60 KESLTLHYGDLTDASNLHSIVSKV--NPTEIYNLGAQ-SHVKVSFDMSEYTGDVDGLGCL 116
Query: 213 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET 268
+L + G ++ STSE+YG + PQ ET P RS Y K+ A
Sbjct: 117 RLLDAIRSCGMEKKVKYYQASTSELYGKVQEIPQSET-----TPFYPRSPYAVAKQYAYW 171
Query: 269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQ-ALRKEPLTVYGDGKQTRS 326
+ ++Y + +FN PR R ++ FVA A ++ + G+ R
Sbjct: 172 IVVNYREAYDMYACNGILFNHESPRRGPTFVTRKITRFVAGIACGRDEILYLGNINAKRD 231
Query: 327 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 371
+ D VE + +++ E F + ++ E + + ID
Sbjct: 232 WGHARDYVEAMWLMLQQEKPEDFVIATGETHSVREFVEKSFKEID 276
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV-KDFRQRIFGD 426
+RP TE D P+ +AK+LL W+ K S + + +MV KD GD
Sbjct: 307 YRP-TEVDLLLGNPN--KAKKLLQWQIKTSFGELVKEMVAKDIEYIKNGD 353
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 54/208 (25%), Positives = 91/208 (43%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---FTGR---KENV--MHHFGNPNFELI 169
+++VTGGAG++GSH V L+ G +V+DNF F G E++ + + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+++ L+ + H A + P+ + N+ GT+ +L + K G
Sbjct: 64 EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGAGV- 279
+ L+ S+S VYG+P P E + P G + Y + K E + D +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 280 EVRIARIFNTYGPRM--CI-DDGRVVSN 304
+ R FN G CI +D + + N
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPN 206
>TIGR_CMR|SPO_0852 [details] [associations]
symbol:SPO_0852 "oxidoreductase, Gfo/Idh/MocA family"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] InterPro:IPR000683 InterPro:IPR001509 Pfam:PF01370
Pfam:PF01408 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0050662 GO:GO:0016491
GO:GO:0044237 GO:GO:0055114 RefSeq:YP_166105.1
ProteinModelPortal:Q5LV50 GeneID:3195862 KEGG:sil:SPO0852
PATRIC:23374985 HOGENOM:HOG000138564 OMA:VHILTPP
ProtClustDB:CLSK767254 Uniprot:Q5LV50
Length = 699
Score = 116 (45.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 62/255 (24%), Positives = 96/255 (37%)
Query: 108 IPLGLKRKGL-RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF 166
+P RK +V GG GF+G L L+ARG V V+ G ++ +
Sbjct: 359 VPASPSRKPAPSAMVIGGTGFIGRALTRELVARGSDVRVISRGRQGSFADLPDQVETVSL 418
Query: 167 ELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 226
L + + + +D +Y+LA + + N V +G A
Sbjct: 419 SLRDTEGLARAMAGIDTVYNLARSTD------SSWEDCLQNDVAVAEGIGKAALAAGVRR 472
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNP--IGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
L T + + P P + R+ Y K E M HR + + + IA
Sbjct: 473 LVYTGTIASFDMSDPAATITDATPLPDEMDERNLYARSKAECERRLMALHRQSALPLVIA 532
Query: 285 R---IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM 341
R + GP GR A A+R ++G+G+ F + D V+GL+R
Sbjct: 533 RPGIVLGAGGPLQHWGIGRWHG---AGAVR-----LWGNGRNPLPFVLIGDCVDGLIRCA 584
Query: 342 EGEHV-G-PFNLGNP 354
E E + G FNL P
Sbjct: 585 EAEGIEGRAFNLVGP 599
Score = 52 (23.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 379 RPNTED---DPHKRKPDISRAKELLGWEP 404
RP+ D H+ + DIS A+ LGW P
Sbjct: 651 RPSRADWLSRAHQSRFDISGARSALGWHP 679
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 68/276 (24%), Positives = 120/276 (43%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSV-----IVVDNFFTGRKENVMHHFGNPNFELIRH 171
+ I+VTG AGF+G L+ L+ RG + T + + +P ++
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGSLTDRHGQLHPIQRITAFDRDPVQGLDDPRVQVKGG 60
Query: 172 DVVEPLLLE--VDQ----IYHLACP-ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA- 223
D+ +P +L +D I+HLA +S F+ ++ N T +L A+++G
Sbjct: 61 DITDPQVLANLIDANTQGIFHLAAVVSSQAESDFD--LGMRVNFSATQGLLERARQLGTC 118
Query: 224 -RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
++++TS+ V+G L P +T G+ +S Y K + L DY R V+ R
Sbjct: 119 PKWVMTSSVAVFGGQL--P--DTV-GDDQVWSPQSSYGTQKAMNDLLLADYSRRGFVDGR 173
Query: 283 IARIFNTYGPRMCIDDGR---VVSNFVAQALRKEPL----TVYGDGKQTRSFQFVSDLVE 335
R+ P + + G+ S+F + +R EPL +V TR + +S +
Sbjct: 174 SLRM-----PTIVVRPGKPNLAASSFASGIIR-EPLNGQASVCPVPLNTRLW-LMSP-AQ 225
Query: 336 GLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 371
+ L+ G + L M L+Q V++ ID
Sbjct: 226 AIANLVHGHELAAERLNQGRVINMPGLSQTVEQMID 261
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 110 (43.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 69/272 (25%), Positives = 115/272 (42%)
Query: 103 NSGGKIPLGLKRKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--- 158
+ GG+ +G K+ L +TG G ++ L+++ V +F TGR E++
Sbjct: 1 DGGGE--MGDKKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNS 58
Query: 159 --HHFGNPNF---ELIRHDVVEPLLLEV--DQIYHLACPASPVHYKFNPVK-TIKTNVVG 210
H GN +L + ++ EV ++IY+L S V F+ + T + VG
Sbjct: 59 QAHIEGNMKLHYGDLTDSTCLVKIINEVKPNEIYNLGAQ-SHVKISFDLAEYTADVDGVG 117
Query: 211 TLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA 266
TL +L K G +F STSE++G + PQKET P RS Y K A
Sbjct: 118 TLRLLDAIKTCGLINSVKFYQASTSELFGKVQEIPQKET-----TPFYPRSPYGAAKLYA 172
Query: 267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQT 324
+ +++ + +FN PR + R +S VA+ L + G+
Sbjct: 173 YWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIHLGQMDSFSLGNLDAK 232
Query: 325 RSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
R + D VE + +++ + F + GE
Sbjct: 233 RDWGHARDYVEAMWLMLQTDEPEDFVIAT-GE 263
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
+RP TE D + D ++A++ L W+P+V+ + + +MV
Sbjct: 310 YRP-TEVD--FLQGDCTKARQKLNWKPRVTFDELVREMV 345
>UNIPROTKB|Q3Z6W4 [details] [associations]
symbol:DET1324 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 95 (38.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMHHFGNPNFELIRHDVVE- 175
R+ V+GG+GFVG HL+ RL G + ++V N ++ P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMNEAEAKRVKT------PGVEFVYGTVNDL 57
Query: 176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 234
P+L+E + + + + K N+ GT NML A + G RF+
Sbjct: 58 PVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVKRFIHMGILGAS 117
Query: 235 GDP 237
DP
Sbjct: 118 ADP 120
Score = 64 (27.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 292 PRMCIDDGRVVSNFVAQALRKEPLT--VYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP- 348
P + G + ++ + PL V G+GK +V D+V L+++++GE +
Sbjct: 147 PSVMFGQGAGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQS 206
Query: 349 FNLGNPGEFTMLELAQVVQETI 370
+G P FT E+ V + +
Sbjct: 207 VQIGGPRIFTYDEVLLAVMQAM 228
>TIGR_CMR|DET_1324 [details] [associations]
symbol:DET_1324 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 95 (38.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMHHFGNPNFELIRHDVVE- 175
R+ V+GG+GFVG HL+ RL G + ++V N ++ P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMNEAEAKRVKT------PGVEFVYGTVNDL 57
Query: 176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 234
P+L+E + + + + K N+ GT NML A + G RF+
Sbjct: 58 PVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVKRFIHMGILGAS 117
Query: 235 GDP 237
DP
Sbjct: 118 ADP 120
Score = 64 (27.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 292 PRMCIDDGRVVSNFVAQALRKEPLT--VYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP- 348
P + G + ++ + PL V G+GK +V D+V L+++++GE +
Sbjct: 147 PSVMFGQGAGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQS 206
Query: 349 FNLGNPGEFTMLELAQVVQETI 370
+G P FT E+ V + +
Sbjct: 207 VQIGGPRIFTYDEVLLAVMQAM 228
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 67/248 (27%), Positives = 105/248 (42%)
Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKE------NVMHHFGNPNFELIRH 171
I+VTGGAGF+GS++V L +G ++VVDN G K N+ + +F LI+
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF-LIQI 60
Query: 172 DVVEPLLLEVDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
E +V+ I+H AC ++ +++ + N + +L FL S+
Sbjct: 61 MAGEEFG-DVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116
Query: 231 SEVYGDPLQH-PQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
+ YG + Y +N G + +DE R + L A ++ R FN
Sbjct: 117 AATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVR--QILPE-----ANSQIVGFRYFN 169
Query: 289 TYGPRMCIDDGRVVS---NFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE 344
YGPR G + S + Q E P G R F +V D+ + + +E
Sbjct: 170 VYGPREG-HKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228
Query: 345 HVGPFNLG 352
G FNLG
Sbjct: 229 VSGIFNLG 236
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 118 RIVVTGGAGFVGSHLVDRL--IARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR--HDV 173
+I+VTG G +GS LV +L + +VI D T + F + + HD+
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLHDI 62
Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV 233
+ EVD I HLA S K NP+ N+ G +N L A+ + +F S+
Sbjct: 63 AKRN--EVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGA 119
Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
+G P P+ T + + Y K E L YH+ GV+ R R F
Sbjct: 120 FG-P-STPKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVR-FPGLISY 174
Query: 294 MCIDDGRVVSNFVA---QALRKEPLTVY-GDGKQTRSFQFVSDLVEGLMRLMEGE----- 344
+ G V +A++K T Y +G ++ D ++ ++ LME +
Sbjct: 175 VAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADPSKLV 233
Query: 345 HVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFR--P--NTEDDPHKRKPDISRAKELL 400
H FN+ F ++A +++ I P +++ P T D D + A +
Sbjct: 234 HRNAFNI-TAMSFEPEQIAASIRKHI-PTFTMDYAVDPARQTIADSWPNSIDATAAMKEW 291
Query: 401 GWEPKVSLRK 410
G++ + L K
Sbjct: 292 GFKAEYDLDK 301
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 118 RIVVTGGAGFVGSHLVDRL--IARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR--HDV 173
+I+VTG G +GS LV +L + +VI D T + F + + HD+
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVTSGPFETLDVTDGQKLHDI 62
Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV 233
+ EVD I HLA S K NP+ N+ G +N L A+ + +F S+
Sbjct: 63 AKRN--EVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGA 119
Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
+G P P+ T + + Y K E L YH+ GV+ R R F
Sbjct: 120 FG-P-STPKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVR-FPGLISY 174
Query: 294 MCIDDGRVVSNFVA---QALRKEPLTVY-GDGKQTRSFQFVSDLVEGLMRLMEGE----- 344
+ G V +A++K T Y +G ++ D ++ ++ LME +
Sbjct: 175 VAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADPSKLV 233
Query: 345 HVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFR--P--NTEDDPHKRKPDISRAKELL 400
H FN+ F ++A +++ I P +++ P T D D + A +
Sbjct: 234 HRNAFNI-TAMSFEPEQIAASIRKHI-PTFTMDYAVDPARQTIADSWPNSIDATAAMKEW 291
Query: 401 GWEPKVSLRK 410
G++ + L K
Sbjct: 292 GFKAEYDLDK 301
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 62/296 (20%), Positives = 120/296 (40%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE-NVMHHFGNPNFELIRHDVVE 175
+R++VTGG+G VG ++R++ G+ + F K+ N++ +P +
Sbjct: 5 MRVLVTGGSGLVG-RAIERVVKEGEGREGEEWIFLSSKDANLL----SPEETKAVFEKHR 59
Query: 176 PLLLEVDQIYHLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-V 233
P + HLA + + ++NV N+L A G +++ S +
Sbjct: 60 PT-----HVIHLAAMVGGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCI 114
Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG-- 291
+ D +P ET N P Y KR + + + N +G
Sbjct: 115 FPDKTTYPIDETMIHNGPPHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGCH 174
Query: 292 PRMCIDDGRVVSNFVAQAL--RKE--PLTVYGDGKQTRSFQFVSDLVEGLMRLM-EGEHV 346
I+DG V+ + + +KE PL V+G G+ R F + DL + ++ E + V
Sbjct: 175 DNFNIEDGHVLPGLIHKTYIAKKEGKPLVVWGSGRPLRQFIYSLDLARLFVWVLREYDEV 234
Query: 347 GPF--NLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISRAKELL 400
P ++G E ++ + A V E ++ + + + D K+ ++ ++ L
Sbjct: 235 EPIILSVGEEDELSIKDAADAVVEALEFTGDVIYDTSKADGQFKKTASNAKLRKYL 290
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 106 (42.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 156 NVMHHFGNPNFELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTL 212
N+ H+G +L + ++ EV +IY+L S V F+ + T + VGTL
Sbjct: 49 NMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTL 103
Query: 213 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET 268
+L K G +F STSE+YG + PQKET P RS Y K A
Sbjct: 104 RLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYW 158
Query: 269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRS 326
+ +++ + +FN PR + R +S VA+ L + G+ R
Sbjct: 159 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 218
Query: 327 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
+ D VE + +++ + F + GE
Sbjct: 219 WGHAKDYVEAMWLMLQNDEPEDFVIAT-GE 247
Score = 53 (23.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
+RP TE D + D ++AK+ L W+P+V+ + + +MV
Sbjct: 294 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMV 329
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 107 (42.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 65/254 (25%), Positives = 105/254 (41%)
Query: 121 VTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-----HHFGNPNF---ELIRH 171
+TG G ++ L+++ V +F TGR E++ H GN +L
Sbjct: 31 ITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDS 90
Query: 172 DVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAKRVG----AR 224
+ ++ EV +IY+L S V F+ + T + VGTL +L K G +
Sbjct: 91 TCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 149
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
F STSE+YG + PQKET P RS Y K A + +++ +
Sbjct: 150 FYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 285 RIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
+FN PR + R +S VA+ L + G+ R + D VE + +++
Sbjct: 205 ILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ 264
Query: 343 GEHVGPFNLGNPGE 356
+ F + GE
Sbjct: 265 NDEPEDFVIAT-GE 277
Score = 53 (23.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
+RP TE D + D ++AK+ L W+P+V+ + + +MV
Sbjct: 324 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMV 359
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 107 (42.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 65/254 (25%), Positives = 105/254 (41%)
Query: 121 VTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-----HHFGNPNF---ELIRH 171
+TG G ++ L+++ V +F TGR E++ H GN +L
Sbjct: 31 ITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDS 90
Query: 172 DVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAKRVG----AR 224
+ ++ EV +IY+L S V F+ + T + VGTL +L K G +
Sbjct: 91 TCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK 149
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
F STSE+YG + PQKET P RS Y K A + +++ +
Sbjct: 150 FYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 285 RIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 342
+FN PR + R +S VA+ L + G+ R + D VE + +++
Sbjct: 205 ILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ 264
Query: 343 GEHVGPFNLGNPGE 356
+ F + GE
Sbjct: 265 NDEPEDFVIAT-GE 277
Score = 53 (23.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
+RP TE D + D ++AK+ L W+P+V+ + + +MV
Sbjct: 324 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMV 359
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 106 (42.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 156 NVMHHFGNPNFELIRHDVVEPLLLEVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTL 212
N+ H+G +L + ++ EV +IY+L S V F+ + T + VGTL
Sbjct: 50 NMKLHYG----DLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTL 104
Query: 213 NMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET 268
+L K G +F STSE+YG + PQKET P RS Y K A
Sbjct: 105 RLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYW 159
Query: 269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRS 326
+ +++ + +FN PR + R +S VA+ L + G+ R
Sbjct: 160 IVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD 219
Query: 327 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGE 356
+ D VE + +++ + F + GE
Sbjct: 220 WGHAKDYVEAMWLMLQNDEPEDFVIAT-GE 248
Score = 53 (23.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 378 FRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMV 416
+RP TE D + D ++AK+ L W+P+V+ + + +MV
Sbjct: 295 YRP-TEVD--FLQGDCTKAKQKLNWKPRVAFDELVREMV 330
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 114 (45.2 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 39/127 (30%), Positives = 66/127 (51%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
R++VTGGAGFVG++LV L+ RG V D R +++ +P E+++ D+ +
Sbjct: 16 RVLVTGGAGFVGANLVTTLLDRGHWVRSFD-----RAPSLLP--AHPQLEVLQGDITDAD 68
Query: 178 LLE-----VDQIYHLAC-----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 226
+ +D I+H A + V ++ ++ NV GT N+L +R G RF+
Sbjct: 69 VCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQ-RSFAVNVGGTENLLHAGQRAGVQRFV 127
Query: 227 LTSTSEV 233
TS++ V
Sbjct: 128 YTSSNSV 134
Score = 42 (19.8 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 302 VSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG 343
V + A+R P ++G+G QT + +++G ++++ G
Sbjct: 175 VDGMLTCAIR--PSGIWGNGDQTMFRKLFESVLKGHVKVLVG 214
Score = 38 (18.4 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 393 ISRAKELLGWEP----KVSLRKGLPKMVKDFRQ 421
I++A+ LG+EP + +L + LP V F Q
Sbjct: 322 IAKARRDLGYEPLFTTQQALTECLPYYVSLFEQ 354
>UNIPROTKB|I3LGP6 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 GO:GO:0042350
Ensembl:ENSSSCT00000029895 OMA:KNTHINI Uniprot:I3LGP6
Length = 318
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 75/297 (25%), Positives = 127/297 (42%)
Query: 110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI 169
+G ++ RI+VTGG+G VG + +++A G + D F K+ + + L
Sbjct: 3 MGEPQRSTRILVTGGSGLVG-RAIQKVVADGARLPGEDWVFVSSKDADLTNAAQTR-ALF 60
Query: 170 RHDVVEPLLLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ V+P + HLA + + K+N + + NV ++L A VGAR ++
Sbjct: 61 --EKVQPT-----HVIHLAAMVGGLFRNMKYN-LDFWRKNVHINDSVLHSAFEVGARKVV 112
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI--A 284
+ S ++ D +P E+ V IG R+ G+ A G + +
Sbjct: 113 SCLSTCIFPDKTTYPIDESM---VREIG-RA--XRGRARA---ACSGRPGPAFQTQAPPG 163
Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQ----AL-----RKEPLTVYGDGKQTRSFQFVSDLVE 335
R+F + I+DG V+ + + AL R L V+G G+ R F + DL
Sbjct: 164 RLFGPHD-NFNIEDGHVLPGLIHKVHLAALPLPTGRGSALMVWGTGRPRRQFIYSLDLAR 222
Query: 336 -GLMRLMEGEHVGPFNL--GNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKR 389
L L E + V P L G G ++ E A+ V E +D + ++ F D K+
Sbjct: 223 LFLWVLREYDQVEPIILSGGTLGPXSIREAAEAVVEAMDFHGEVIFDTTKSDGQFKK 279
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 98 (39.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 55/229 (24%), Positives = 89/229 (38%)
Query: 120 VVTGGAGFVGSHLVDRLI------AR-GD---SVIVVDNFFTGRKENVMHHFGNPNF--- 166
VVTGG GF HLV+ L+ R D ++++ + TG + G +
Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRS-GRVQYVSA 71
Query: 167 ELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
+L V + ++H+A P S ++ N NV GT N++ VG R
Sbjct: 72 DLRNKTQVVKGFQGAEVVFHMAAPDSSIN---NHQLQYSVNVQGTTNVIDACIEVGVKRL 128
Query: 226 LLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
+ TS+ V D + H P Y K E L + + +G+ R
Sbjct: 129 IYTSSPSVVFDGV-HGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLTCCIR 187
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
+ +GP D +V + V A + + GDG F +V ++V
Sbjct: 188 PSSIFGP----GDKLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVV 232
Score = 63 (27.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 327 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDP 386
++F+S L+EGL + P +L P + ++ELA + +
Sbjct: 268 WEFMSQLLEGLGYERPSIKI-PASLMMPIAY-LVELAYKLLGPYGMKVPVLTPSRVRLLS 325
Query: 387 HKRKPDISRAKELLGWEPKVSLRKGLPKMVKDF 419
R D S+AK+ LG+ P V L++G+ + + F
Sbjct: 326 CNRTFDSSKAKDRLGYSPVVPLQEGIKRTIDSF 358
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 52/191 (27%), Positives = 81/191 (42%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDV--V 174
I+VTGGAG++GSH V LI G VI+VDN + V + + + + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRDK 67
Query: 175 EPLL-----LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
E L ++ + H A + P++ N+ GT+ +L + + + ++ S
Sbjct: 68 EGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVFS 127
Query: 230 TSE-VYGDPLQHPQKETYWGNVNPIGVRSC-------YDEGKRTAETLTMDYHRGAGV-E 280
+S VYGD T + N+ PI SC Y + K E + D H
Sbjct: 128 SSATVYGDA-------TRFDNMIPIP-ESCPNDPTNPYGKTKYAIENIIKDLHTSDNTWR 179
Query: 281 VRIARIFNTYG 291
I R FN G
Sbjct: 180 GAILRYFNPIG 190
>UNIPROTKB|E9PP14 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI01012947
ProteinModelPortal:E9PP14 SMR:E9PP14 Ensembl:ENST00000533817
ArrayExpress:E9PP14 Bgee:E9PP14 Uniprot:E9PP14
Length = 198
Score = 110 (43.8 bits), Expect = 0.00068, P = 0.00068
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI 169
+G + +RI+VTGG+G VG + +++A G + D F K+ + L
Sbjct: 1 MGEPQGSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTR-ALF 58
Query: 170 RHDVVEPLLLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
+ V+P + HLA + + K+N + + NV N+L A VGAR ++
Sbjct: 59 --EKVQPT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVV 110
Query: 228 TSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
+ S ++ D +P ET N P Y KR + Y + G
Sbjct: 111 SCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIP 170
Query: 287 FNTYGPR--MCIDDGRVVSNFV 306
N +GP I+DG V+ +
Sbjct: 171 TNVFGPHDNFNIEDGHVLPGLI 192
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 103 (41.3 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 57/227 (25%), Positives = 88/227 (38%)
Query: 120 VVTGGAGFVGSHLVDRLIA-RGDSVIVVDN----FFTGRKENVMHHFG--NPNFELIRHD 172
VVTGG GF HLV+ L+ V + D ++ N + G + + I D
Sbjct: 13 VVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISAD 72
Query: 173 V-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 226
+ V + ++H+A P S ++ N NV GT N++ VG R +
Sbjct: 73 LRDKSQVVKAFQGAEVVFHMAAPDSSIN---NHQLQYSVNVQGTQNVIDACVDVGVKRLI 129
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
TS+ V D + T PI Y K E L M + G+ R
Sbjct: 130 YTSSPSVVFDGVHGILNGTE-SMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCIRP 188
Query: 287 FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
+ +GP D +V + VA A + + GDG F +V ++
Sbjct: 189 SSIFGP----GDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENV 231
Score = 60 (26.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 392 DISRAKELLGWEPKVSLRKGLPKMVKDFRQRIFGDH--KEGGAGAT 435
D ++AK+ LG+ P V L++G+ + + F G +EG + A+
Sbjct: 331 DSTKAKDRLGYAPVVPLQEGIRRTIDSFSHLTAGSQSKREGPSKAS 376
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 115 (45.5 bits), Expect = 0.00080, P = 0.00080
Identities = 47/192 (24%), Positives = 78/192 (40%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
RI+VTGGAG++GSH V +L G +V+DN + E++ +
Sbjct: 8 RILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPIAFQ 67
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
D+ + L + H A + P++ N+ GT+ +L +
Sbjct: 68 ELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAMEAYS 127
Query: 223 AR-FLLTSTSEVYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGA-GV 279
R + +S++ VYGDP P E + P+G + Y + K E + D + G
Sbjct: 128 VRNIVFSSSATVYGDPQYLPLDEKH-----PVGGCTNPYGKSKYFIEEMIQDLCKAEKGW 182
Query: 280 EVRIARIFNTYG 291
+ R FN G
Sbjct: 183 NAILLRYFNPIG 194
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 96 (38.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 52/202 (25%), Positives = 87/202 (43%)
Query: 119 IVVTGGAGFVGSHLVDRL--IARGDSVIVVD---------NFFTGRKENVMHHFGNPNFE 167
+++ GG+GF+G HL+ + I + + D FT +++ H G +
Sbjct: 7 VLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVDDIKFHKG----D 62
Query: 168 LIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
L D +E + E + C ASP+H + NP NV GT N++ + K+ G L+
Sbjct: 63 LTSPDDMENAINESKANVVVHC-ASPMHGQ-NPDIYDIVNVKGTRNVIDMCKKCGVNILV 120
Query: 228 TSTSE--VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG----VEV 281
++S ++ H ET W P Y+E K AE + + + + V +
Sbjct: 121 YTSSAGVIFNGQDVHNADET-WPI--PEVPMDAYNETKAIAEDMVLKANDPSSDFYTVAL 177
Query: 282 RIARIFNTYGPRMCIDDGRVVS 303
R A IF G R + R V+
Sbjct: 178 RPAGIFGP-GDRQLVPGLRQVA 198
Score = 61 (26.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 389 RKPDISRAKELLGWEPKVSLRKGLPK 414
R +I++AK+LLG+ P+V + +G+ K
Sbjct: 315 RYHNIAKAKKLLGYTPRVGIEEGINK 340
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 81 (33.6 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDN 148
I+VTGG GF+GSH L+ +V+V+DN
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDN 78
Score = 60 (26.2 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 22/105 (20%), Positives = 40/105 (38%)
Query: 320 DGKQTRSFQFVSDLVEGLMRLMEG-------EHVGPFNLGNPGEFTMLELAQVVQETIDP 372
DG R F V+DL G + ++ E+ FNLG ++ E+ ++
Sbjct: 315 DGTAVRDFIHVTDLARGHIAALDAANERKLAENFRAFNLGTGRGHSVKEVVDAMESVSRK 374
Query: 373 NAKIEFRPNTEDDPHKRKPDISRAKELLGWEPKVSLRKGLPKMVK 417
+ P D +R+++ L W+ + SL + K
Sbjct: 375 QIPVRAAPRRPGDVGSCVAVATRSQQELRWKTEKSLTDACGSLCK 419
Score = 57 (25.1 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYG 235
++ + H A + NP+K NV G ++ + G + F+ +S++ VYG
Sbjct: 140 KISGVIHFAAYKAVEESIKNPLKYYANNVSGLIDFASTLGKYGIKTFIFSSSATVYG 196
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 442 442 0.00090 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 224
No. of states in DFA: 606 (64 KB)
Total size of DFA: 258 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.49u 0.10s 34.59t Elapsed: 00:00:02
Total cpu time: 34.54u 0.10s 34.64t Elapsed: 00:00:02
Start: Fri May 10 21:06:57 2013 End: Fri May 10 21:06:59 2013
WARNINGS ISSUED: 1