BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013469
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYC8|RIN2_ARATH E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana GN=RIN2
PE=1 SV=1
Length = 578
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/439 (72%), Positives = 369/439 (84%), Gaps = 5/439 (1%)
Query: 1 MGASYLVISAASTILSFVGLQFWTEFSLDKLRTDGLVVENVIHLESANRVLELLLRSYAT 60
MG YL +S AST LSFVGLQ WTE SLD+LR DGL+ +N I L + LELLL SY T
Sbjct: 1 MGIKYLPVSVASTALSFVGLQVWTELSLDRLRADGLIAKN-ISLGDSEHALELLLGSYFT 59
Query: 61 VALLANFVLNVFVLINLCLKTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQ 120
+ALL NFVLNV++L+ L LKT+FFG+LY ET+K VERL NY+IYKGTFLPLVIPPT+FQ
Sbjct: 60 IALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANYIIYKGTFLPLVIPPTIFQ 119
Query: 121 AGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMC 180
LW+VWLTVLC+LKMFQALARDRLERLNASPS+TPWTYFRV+S L VL+VD+FWI++
Sbjct: 120 GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVLSVDMFWIKLS 179
Query: 181 LLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDT 240
L+ + T+ S+++LLL FEP S+AFET+QA+L+HGFQLLD+W++H A +++C RSKF D+
Sbjct: 180 LMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFIDS 239
Query: 241 LAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLS 300
+ AGSLLEWKG+L RN GFFLDMATL+MALGHY+HIWWL G+AFHLVDA+LFLNIRALLS
Sbjct: 240 MTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIRALLS 299
Query: 301 AIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLA 360
AI+KRIKG+IKLRIALG LHAALPDATSEELRAYDDECAICREPMAKAK+L CNHLFHL
Sbjct: 300 AILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLG 359
Query: 361 CLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTG 420
CLRSWLDQGLNE+YSCPTCRKPLFVGR E E N R EVSSDEQLARQ L+RQNN
Sbjct: 360 CLRSWLDQGLNEVYSCPTCRKPLFVGRTENEVNPRTVEVSSDEQLARQ----LERQNNPV 415
Query: 421 QTLPTGVFPNQTQPPVEGS 439
L TG+FP + VE
Sbjct: 416 HALATGLFPAEVPDSVEND 434
>sp|Q8W4Q5|RIN3_ARATH E3 ubiquitin protein ligase RIN3 OS=Arabidopsis thaliana GN=RIN3
PE=1 SV=2
Length = 577
Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/441 (69%), Positives = 370/441 (83%), Gaps = 5/441 (1%)
Query: 1 MGASYLVISAASTILSFVGLQFWTEFSLDKLRTDGLVVENVIHLESANRVLELLLRSYAT 60
MG +YL IS A+T LSFVGLQ WTE SLD+LR DG++ +N I L ++ LELLL S+ T
Sbjct: 1 MGITYLHISVATTALSFVGLQVWTELSLDRLRADGIITKN-ISLGNSENTLELLLSSHTT 59
Query: 61 VALLANFVLNVFVLINLCLKTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQ 120
+ALLA+FVLN+++L+ L LKT+FFG+LY ETRK VERL NY+IYKGTFLP V+P TVFQ
Sbjct: 60 IALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANYIIYKGTFLPFVVPRTVFQ 119
Query: 121 AGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMC 180
LW++WLTVLC+LKMFQALARDRL+RLNASPS+TPWTYFRV+SAL VL+ D+ WI++
Sbjct: 120 GVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSALFMVLSTDLCWIKLS 179
Query: 181 LLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDT 240
L+++ T+ SS++LLL FEP +AFET+QA+L+HGFQLLD+W++H A +++C RSKF+D+
Sbjct: 180 LMIYNTVGSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDS 239
Query: 241 LAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLS 300
+ AGSLLEWKG+L RN GFFLDMATL+MALGHY+HIWWL GMAFHLVDA+LFLNIRALLS
Sbjct: 240 MTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLS 299
Query: 301 AIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLA 360
+I+KRIKG+IKLR+ALG LHAAL DATSEELR YDDECAICREPMAKAK+L CNHLFHL
Sbjct: 300 SILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLG 359
Query: 361 CLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTG 420
CLRSWLDQGLNE+YSCPTCRKPLFVGR E EAN GEVSSDE LARQ +RQNN+
Sbjct: 360 CLRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQ----FERQNNSV 415
Query: 421 QTLPTGVFPNQTQPPVEGSPW 441
L TG+FP +T E PW
Sbjct: 416 HALTTGMFPTETPNFTESDPW 436
>sp|Q9R049|AMFR_MOUSE E3 ubiquitin-protein ligase AMFR OS=Mus musculus GN=Amfr PE=1 SV=2
Length = 643
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 161/364 (44%), Gaps = 31/364 (8%)
Query: 47 ANRVLELLLRSYATVALLANFVLNVFVLINLCLKTIFFGELYPAETRKFVERLINYVIYK 106
A V + LL V +L N V +L+ ++ I FG L +E + ++ N++ YK
Sbjct: 70 ARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYK 129
Query: 107 GTFLPLVIP-PTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSA 165
F+ V+ TV + +W +W L L + L +DR E L+ SP+ ++ RV S
Sbjct: 130 FIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSL 189
Query: 166 LLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHS 225
L+ +L +C + T + E L V T IL + L D L+H
Sbjct: 190 LIAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWD--LNHE 247
Query: 226 AGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFH 285
E KG + F +++A L + L H+IH+ +
Sbjct: 248 G-------------------TWEGKGTYVYYTDFVMELALLSLDLMHHIHMLLFGNIWLS 288
Query: 286 LVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPM 345
+ ++F+ +R L + +RI+ +G++ A AT EEL +D+CAIC + M
Sbjct: 289 MASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSM 348
Query: 346 AKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 405
A+KL C HLFH +CLRSWL+Q SCPTCR L I SR E E L
Sbjct: 349 QAARKLPCGHLFHNSCLRSWLEQDT----SCPTCRMSL-----NIADGSRAREDHQGENL 399
Query: 406 ARQL 409
L
Sbjct: 400 DENL 403
>sp|Q9UKV5|AMFR_HUMAN E3 ubiquitin-protein ligase AMFR OS=Homo sapiens GN=AMFR PE=1 SV=2
Length = 643
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 161/364 (44%), Gaps = 31/364 (8%)
Query: 47 ANRVLELLLRSYATVALLANFVLNVFVLINLCLKTIFFGELYPAETRKFVERLINYVIYK 106
A V + LL V +L N V +L+ ++ I FG L +E + ++ N++ YK
Sbjct: 70 ARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYK 129
Query: 107 GTFLPLVIP-PTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSA 165
F+ V+ TV + +W +W L L + L +DR E L+ SP+ ++ RV S
Sbjct: 130 FIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSL 189
Query: 166 LLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHS 225
L+ +L +C + T + E L V T IL + L D L+H
Sbjct: 190 LVAMLLSCCGLAAVCSITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWD--LNHE 247
Query: 226 AGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFH 285
E KG + F +++ L + L H+IH+ +
Sbjct: 248 G-------------------TWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLS 288
Query: 286 LVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPM 345
+ ++F+ +R L + +RI+ +G++ A AT EEL +D+CAIC + M
Sbjct: 289 MASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSM 348
Query: 346 AKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 405
A+KL C HLFH +CLRSWL+Q SCPTCR L I N+R E E L
Sbjct: 349 QAARKLPCGHLFHNSCLRSWLEQDT----SCPTCRMSL-----NIADNNRVREEHQGENL 399
Query: 406 ARQL 409
L
Sbjct: 400 DENL 403
>sp|Q803I8|SYVN1_DANRE E3 ubiquitin-protein ligase synoviolin OS=Danio rerio GN=syvn1 PE=2
SV=2
Length = 625
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 157/338 (46%), Gaps = 54/338 (15%)
Query: 54 LLRSYATVALL--ANFVLNVFVLINLCLKTIFFGELYPAETRKFVER--------LINYV 103
L +S ++A+L FVL VF+L L ++ +FFG+L AE +ER + +
Sbjct: 36 LTKSSPSMAVLYIQAFVL-VFLLGKL-MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFT 93
Query: 104 IYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVF 163
+++ F P + T+L LK F LA DR++ + SP+ + +FRV
Sbjct: 94 VFRDDFSPRFV-----------ALFTLLLFLKCFHWLAEDRVDFMERSPNISWVFHFRVL 142
Query: 164 SALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLH 223
S ++ + +D ++ T +S+ L+ FE + + + + +D+
Sbjct: 143 SLMVLLGVMDFLFVNHACHSIITRGASVQLVFGFEYAILMTMVLTTFIKYTLHTIDL--- 199
Query: 224 HSAGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMA 283
S N A + L G + K +L ++ T+++ + H ++ +R M
Sbjct: 200 QSENPWDNKAVYMLYTELFTGFI---KVLL------YMAFMTIMIKV-HTFPLFAIRPM- 248
Query: 284 FHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICRE 343
+L +R A+ I R A+ +++ PDAT E+L+A D+ C ICRE
Sbjct: 249 --------YLAMRQFKKAVTDAIMS----RRAIRNMNTLYPDATPEDLQATDNVCIICRE 296
Query: 344 PMAK-AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCR 380
M AKKL CNH+FH +CLRSW + +CPTCR
Sbjct: 297 EMVTGAKKLPCNHIFHSSCLRSWFQR----QQTCPTCR 330
>sp|Q5XHH7|SYVNB_XENLA E3 ubiquitin-protein ligase synoviolin B OS=Xenopus laevis
GN=syvn1-b PE=2 SV=1
Length = 595
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 56/339 (16%)
Query: 54 LLRSYATVALLANFVLNVFVLINLCLK---TIFFGELYPAETRKFVER--------LINY 102
L +S ++A+L + FVL+ L K +FFG+L AE +ER + +
Sbjct: 30 LTKSSPSMAIL---YIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAF 86
Query: 103 VIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRV 162
+++ F P + T+L LK F LA DR++ + SP+ + +FR+
Sbjct: 87 TVFRDDFSPRFV-----------ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRI 135
Query: 163 FSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWL 222
+ +L + +D F++ T +S+ L+ FE + + +++ F + L
Sbjct: 136 LALMLLLGVLDAFFVSHAYNSLVTRGASVQLVFGFE-----YAILMTMILAVF--IKYIL 188
Query: 223 HHSAGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGM 282
H S N +K L + +L+ ++ T+++ + H ++ +R M
Sbjct: 189 HSVDLQSENPWDNKAVYMLYTELFTGFIKVLL-----YMAFMTIMVKV-HTFPLFAIRPM 242
Query: 283 AFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICR 342
+L +R A+ + R A+ +++ PDAT+EEL+A D+ C ICR
Sbjct: 243 ---------YLAMRQFKKAVTDAVMS----RRAIRNMNTLYPDATAEELQAMDNVCIICR 289
Query: 343 EPM-AKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCR 380
E M + AK+L CNH+FH +CLRSW + +CPTCR
Sbjct: 290 EEMVSGAKRLPCNHIFHTSCLRSWFQR----QQTCPTCR 324
>sp|Q6NRL6|SYVNA_XENLA E3 ubiquitin-protein ligase synoviolin A OS=Xenopus laevis
GN=syvn1-a PE=2 SV=1
Length = 605
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 56/339 (16%)
Query: 54 LLRSYATVALLANFVLNVFVLINLCLK---TIFFGELYPAETRKFVER--------LINY 102
L +S ++A+L + FVL+ L K +FFG+L AE +ER + +
Sbjct: 30 LTKSSPSMAVL---YIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAF 86
Query: 103 VIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRV 162
+++ F P + T+L LK F LA DR++ + SP+ + +FR+
Sbjct: 87 TVFRDDFSPRFV-----------ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRI 135
Query: 163 FSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWL 222
+ +L + +D F++ +S+ L+ FE + + +++ F + L
Sbjct: 136 LALMLLLGVLDAFFVSHAYHSLVIRGASVQLVFGFE-----YAILMTVILTVF--IKYIL 188
Query: 223 HHSAGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGM 282
H S N +K L + +L+ ++ T+++ + H ++ +R M
Sbjct: 189 HSVDLQSENPWDNKAVYMLYTELFTGFIKVLL-----YVAFMTIMVKV-HTFPLFAIRPM 242
Query: 283 AFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICR 342
+L +R A+ I R A+ +++ PDAT+EEL+A D+ C ICR
Sbjct: 243 ---------YLAMRQFKKAVTDAIMS----RRAIRNMNTLYPDATAEELQAMDNVCIICR 289
Query: 343 EPMAK-AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCR 380
E M AK+L CNH+FH +CLRSW + +CPTCR
Sbjct: 290 EEMVTGAKRLPCNHIFHTSCLRSWFQR----QQTCPTCR 324
>sp|Q9DBY1|SYVN1_MOUSE E3 ubiquitin-protein ligase synoviolin OS=Mus musculus GN=Syvn1
PE=1 SV=3
Length = 612
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 165/363 (45%), Gaps = 60/363 (16%)
Query: 54 LLRSYATVALLANFVLNVFVLINLCLKT---IFFGELYPAETRKFVER--------LINY 102
L +S ++A+L + FVL+ L K +FFG+L AE +ER + +
Sbjct: 36 LTKSSPSMAVL---YIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAF 92
Query: 103 VIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRV 162
+++ F P + T+L LK F LA DR++ + SP+ + W +
Sbjct: 93 TVFRDDFSPRFV-----------ALFTLLLFLKCFHWLAEDRVDFMERSPNIS-WLFHCR 140
Query: 163 FSALLFVLAV-DIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIW 221
+L+F+L + D ++ T +S+ L+ FE + + +++ F +
Sbjct: 141 IVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFE-----YAILMTMVLTIF--IKYV 193
Query: 222 LHHSAGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRG 281
LH S N +K L + +L+ ++ T+++ + H ++ +R
Sbjct: 194 LHSVDLQSENPWDNKAVYMLYTELFTGFIKVLL-----YMAFMTIMIKV-HTFPLFAIRP 247
Query: 282 MAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAIC 341
M +L +R A+ I R A+ +++ PDAT EEL+A D+ C IC
Sbjct: 248 M---------YLAMRQFKKAVTDAIMS----RRAIRNMNTLYPDATPEELQAVDNVCIIC 294
Query: 342 REPMAK-AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVS 400
RE M AK+L CNH+FH +CLRSW + +CPTCR + V R + A S P
Sbjct: 295 REEMVTGAKRLPCNHIFHTSCLRSWFQR----QQTCPTCR--MDVLRASLPAQSPPPPEP 348
Query: 401 SDE 403
+D+
Sbjct: 349 ADQ 351
>sp|Q86TM6|SYVN1_HUMAN E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens GN=SYVN1
PE=1 SV=2
Length = 617
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 165/363 (45%), Gaps = 60/363 (16%)
Query: 54 LLRSYATVALLANFVLNVFVLINLCLKT---IFFGELYPAETRKFVER--------LINY 102
L +S ++A+L + FVL+ L K +FFG+L AE +ER + +
Sbjct: 36 LTKSSPSMAVL---YIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAF 92
Query: 103 VIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRV 162
+++ F P + T+L LK F LA DR++ + SP+ + W +
Sbjct: 93 TVFRDDFSPRFV-----------ALFTLLLFLKCFHWLAEDRVDFMERSPNIS-WLFHCR 140
Query: 163 FSALLFVLAV-DIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIW 221
+L+F+L + D ++ T +S+ L+ FE + + +++ F +
Sbjct: 141 IVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFE-----YAILMTMVLTIF--IKYV 193
Query: 222 LHHSAGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRG 281
LH S N +K L + +L+ ++ T+++ + H ++ +R
Sbjct: 194 LHSVDLQSENPWDNKAVYMLYTELFTGFIKVLL-----YMAFMTIMIKV-HTFPLFAIRP 247
Query: 282 MAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAIC 341
M +L +R A+ I R A+ +++ PDAT EEL+A D+ C IC
Sbjct: 248 M---------YLAMRQFKKAVTDAIMS----RRAIRNMNTLYPDATPEELQAMDNVCIIC 294
Query: 342 REPMAK-AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVS 400
RE M AK+L CNH+FH +CLRSW + +CPTCR + V R + A S P
Sbjct: 295 REEMVTGAKRLPCNHIFHTSCLRSWFQR----QQTCPTCR--MDVLRASLPAQSPPPPEP 348
Query: 401 SDE 403
+D+
Sbjct: 349 ADQ 351
>sp|Q20798|HRD1_CAEEL E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis elegans
GN=sel-11 PE=3 SV=1
Length = 610
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 44/341 (12%)
Query: 54 LLRSYATVALL-ANFVLNVFVLINLCLKTIFFGELYPAETRKFVERLINYVIYKGTFLPL 112
L +S A++A++ ++ V+++ L LK+I FG+L AE ER + V L
Sbjct: 37 LSKSNASMAVIYVQGIVLVYLMFQL-LKSILFGDLRAAEAEHLSERTWHAV------LET 89
Query: 113 VIPPTVFQAGLWSVWLTVLCSL---KMFQALARDRLERLNASPSATPWTYFRVFSALLFV 169
+ TVF+ ++++ L K F LA DR++ + SP T + R+ + L +
Sbjct: 90 CLAFTVFRDDFSAIFVMQFIGLLFIKCFHWLADDRVDMMERSPVITLRFHLRMMTVLAAL 149
Query: 170 LAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNS 229
D +++ T +S ++ FE + + A+++H + LH +
Sbjct: 150 GFADSYFVSSAYFTTITRGASAQIVFGFE-----YAILLALVLH--VTIKYLLHMHDLRN 202
Query: 230 TNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDA 289
+K L A + L+ +GFF ++M H ++ +R
Sbjct: 203 PQSWDNKAVYLLYAELFINLIRCLL--YGFF----AVVMLRVHTFPLFSVRP-------- 248
Query: 290 ILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPM---A 346
+ ++RAL A + I R A+ +++ P ++E+L A D C ICRE M A
Sbjct: 249 -FYQSVRALHKAFLDVILS----RRAINAMNSQFPVVSAEDLAAMDATCIICREEMTVDA 303
Query: 347 KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGR 387
K+L C+H+FH CLRSW + +CPTCR ++ GR
Sbjct: 304 SPKRLPCSHVFHAHCLRSWFQR----QQTCPTCRTDIWQGR 340
>sp|A8Y4B2|HRD1_CAEBR E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae
GN=sel-11 PE=3 SV=2
Length = 622
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 48/343 (13%)
Query: 54 LLRSYATVALLA-NFVLNVFVLINLCLKTIFFGELYPAETRKFVERLINYVIYKGTFLPL 112
L +S A++A+L ++ V+++ L LK+I FG+L AE ER + V+
Sbjct: 37 LSKSNASMAVLYFQGIVLVYLMFQL-LKSILFGDLRAAEAEHLSERTWHAVLETCLAF-- 93
Query: 113 VIPPTVFQAGLWSVWLTVLCSL---KMFQALARDRLERLNASPSATPWTYFRVFSALLFV 169
TVF+ ++++ L K F LA DR++ + SP T + R+ + L +
Sbjct: 94 ----TVFRDDFSAMFVMQFIGLLFIKCFHWLADDRVDMMERSPVITLRFHLRMMTVLAAL 149
Query: 170 LAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNS 229
D +++ T +S ++ FE + + A+++H + LH +
Sbjct: 150 GFADSYFVSSAYFSTITKGASSQIVFGFE-----YAILLALVLH--VTIKYLLHMHDLRN 202
Query: 230 TNCARSKFFDTLAAGSLLEWKGILIRN--FGFFLDMATLLMALGHYIHIWWLRGMAFHLV 287
+K L A L+ LIR +GFF ++M H ++ +R
Sbjct: 203 PQSWDNKAVYLLYAELLIN----LIRCVLYGFF----AVIMLRVHTFPLFSVRP------ 248
Query: 288 DAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPM-- 345
+ ++RAL A + I R A+ +++ P +++EL A D C ICRE M
Sbjct: 249 ---FYQSVRALHKAFLDVILS----RRAINAMNSQFPVVSNDELSAMDATCIICREEMTV 301
Query: 346 -AKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGR 387
+ K+L C+H+FH CLRSW + +CPTCR ++ GR
Sbjct: 302 ESSPKRLPCSHVFHAHCLRSWFQR----QQTCPTCRTDIWQGR 340
>sp|Q95SP2|HRD1_DROME E3 ubiquitin-protein ligase HRD1 OS=Drosophila melanogaster GN=sip3
PE=1 SV=1
Length = 626
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 151/366 (41%), Gaps = 61/366 (16%)
Query: 54 LLRSYATVALL-ANFVLNVFVLINLCLKTIFFGELYPAETRKFVERL--------INYVI 104
+ +S A++ ++ F + VF+ L L IF G L AE +ER + + +
Sbjct: 34 ITKSNASMGVIYIQFFVIVFMFGKL-LSKIFLGTLRAAEFEHLLERFWYALTETCLAFTV 92
Query: 105 YKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFS 164
++ F P + TVL LK F LA +R++ + SP W +
Sbjct: 93 FRDDFNPRFV-----------ALFTVLLFLKSFHWLAEERVDFMERSP-VLGWLFHIRVG 140
Query: 165 ALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHH 224
+LL VL + + +LL +S++ V T+Q + + +L +
Sbjct: 141 SLLTVLGILDY-----VLLIHAYNSTL----------VRGPTVQLVFGFEYAILLTVIAS 185
Query: 225 SAGNSTNCARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAF 284
+A A DT W+ + F + ++ L+ + YI + +
Sbjct: 186 TAIKYVLHAAEMRTDT-------PWENKAV--FLLYTELVIGLIKVVLYILFVVIMAKIY 236
Query: 285 HL---VDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAIC 341
L V +F IR A+ I R A+ +++ PDAT EELR D+ C IC
Sbjct: 237 ALPMFVFRPMFFTIRNFRKAL----NDVIMSRRAIRNMNTLYPDATPEELRQSDNICIIC 292
Query: 342 REPMAK-AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVS 400
RE M +KKL C H+FH CLRSW + +CPTCR + R NS
Sbjct: 293 REDMVNHSKKLPCGHIFHTTCLRSWFQR----QQTCPTCRLNIL---RTPTVNSTAMPRQ 345
Query: 401 SDEQLA 406
DE +A
Sbjct: 346 GDEAVA 351
>sp|Q7TMV1|RN139_MOUSE E3 ubiquitin-protein ligase RNF139 OS=Mus musculus GN=Rnf139 PE=1
SV=1
Length = 668
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 307 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 365
K F+ R A+ +++ LP+ L+ DD CAIC + ++ CNH FH CLR W
Sbjct: 517 KTFMNRRTAVKKINS-LPEIKGSHLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKW 575
Query: 366 LDQGLNEMYSCPTCRKPLFVGRREIEANSR---------PGEVSSDEQLARQLSMGLDRQ 416
L +CP C + +++ EI+ NS P E + E+ R+ + G DR+
Sbjct: 576 ----LYIQDTCPMCHQKVYI-EDEIKDNSNASNNNGFIAPNENPNPEEALREDAAGSDRE 630
Query: 417 NN 418
N
Sbjct: 631 LN 632
>sp|Q7KRW1|TRC8_DROME Protein TRC8 homolog OS=Drosophila melanogaster GN=Trc8 PE=1 SV=1
Length = 809
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 309 FIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQ 368
F+K R A+ H +ALP+AT +L+A+DD CAIC + M AK C H FH CLR W
Sbjct: 593 FMKRRSAV-HKISALPEATPAQLQAFDDVCAICYQEMYSAKITRCRHFFHGVCLRKW--- 648
Query: 369 GLNEMYSCPTCRK 381
L CP C +
Sbjct: 649 -LYVQDRCPLCHE 660
>sp|O74757|HRD1_SCHPO ERAD-associated E3 ubiquitin-protein ligase hrd1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=hrd1 PE=1 SV=1
Length = 677
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 33/163 (20%)
Query: 301 AIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPM--------------- 345
++ +RI+ + R A ++A P AT E+L D C ICRE M
Sbjct: 255 SLFRRIREHARFRQATRDMNAMYPTATEEQLTNSDRTCTICREEMFHPDHPPENTDEMEP 314
Query: 346 ------AKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEV 399
K+L C H+ H CLR+WL++ +CP CR+ + +G + +S G
Sbjct: 315 LPRGLDMTPKRLPCGHILHFHCLRNWLER----QQTCPICRRSV-IGNQ----SSPTGIP 365
Query: 400 SSDEQLARQLSMGLDRQNNTGQTLPTGVFPNQTQPPVEGSPWS 442
+S A Q++ + NT T P T +G P +
Sbjct: 366 ASPNVRATQIATQVPNPQNTPTTT---AVPGITNSSNQGDPQA 405
>sp|Q7ZWF4|RN145_DANRE RING finger protein 145 OS=Danio rerio GN=rnf145 PE=2 SV=1
Length = 685
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 318 HLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCP 377
H ++P A++ +L+ ++D C+IC + M A C+H FH ACL+ WL + E +CP
Sbjct: 517 HKIQSMPTASTLQLQQHNDICSICFQDMKSAVITPCSHFFHAACLKKWLY--VQE--TCP 572
Query: 378 TCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQT 422
C L + +++ S PG + A Q ++++ Q
Sbjct: 573 LCHGQL---KSQLQPTSSPGTPTQGTPAANQNPREVEQEQRQPQV 614
>sp|A8WWR3|HRDL1_CAEBR E3 ubiquitin-protein ligase hrd-like protein 1 OS=Caenorhabditis
briggsae GN=hrdl-1 PE=3 SV=1
Length = 578
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 126/318 (39%), Gaps = 48/318 (15%)
Query: 72 FVLINLCLKTIF---FGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGL-WSVW 127
F ++ +C K I F EL E + ++Y++ +L +V P + W +W
Sbjct: 110 FAILAMCTKLIIKLTFKELSRQEEVAARQAFLSYILLTIVYLSVVTGPQKGHRVMPWMIW 169
Query: 128 LTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTL 187
V L Q + RL+ SPS + RV LF+ V I M + L
Sbjct: 170 GGVCGFLSHLQFVTCQRLKY--TSPSCDRGSQ-RVSFISLFLFFVSIAMTFMVSRFQQHL 226
Query: 188 DSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLL 247
+ +LL+F+ L F + + F +++ +
Sbjct: 227 EWQPAVLLYFDCLLAVFRSTYIL---------------------------FRCISSSRVF 259
Query: 248 EWKGILIRNFGFFLDMAT-----LLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAI 302
+ +R+F ++L++AT LL L + + G+ +L +++ + +
Sbjct: 260 SFNPDSVRHFNYWLELATNFACELLQFLSYAQLFVFAPGL--NLTSIFFLYHMKLTYNCM 317
Query: 303 IKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACL 362
+++ + H+ +A P + DD C +C E + +++L C+H FH CL
Sbjct: 318 REQLGRHRTHKKIFEHIESAYPSVKAAN---SDDRCIVCWELLGTSRRLPCSHQFHDWCL 374
Query: 363 RSWLDQGLNEMYSCPTCR 380
WL Q SCPTCR
Sbjct: 375 MWWLAQD----SSCPTCR 388
>sp|Q5SWK7|RN145_MOUSE RING finger protein 145 OS=Mus musculus GN=Rnf145 PE=2 SV=1
Length = 663
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 307 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 366
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ W
Sbjct: 507 KSFLLRRDAVNKIKS-LPVATQEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKW- 564
Query: 367 DQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTLPTG 426
L +CP C L ++ PG + A Q G + QN Q P
Sbjct: 565 ---LYVQDTCPLCHCHL------KNSSQLPG---LGTEAAPQPPAGAE-QNIVLQEGPEP 611
Query: 427 VFPNQTQPPVEGS 439
P+ PP G+
Sbjct: 612 --PDHESPPGTGT 622
>sp|Q0IJ20|RN145_XENTR RING finger protein 145 OS=Xenopus tropicalis GN=rnf145 PE=2 SV=1
Length = 695
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 307 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 366
K F+ R A+ + + LP AT E+L ++D C+IC + M A C+H FH CL+ WL
Sbjct: 507 KSFLLRRDAVNKIKS-LPVATKEQLEQHNDICSICYQDMNSAVITPCSHFFHPGCLKKWL 565
Query: 367 DQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMG-LDRQNNTGQTLPT 425
+ E +CP C L ++ S EQ A +G + R T T P
Sbjct: 566 Y--VQE--TCPLCHCQLKSLSQQATGESGSSTNPVSEQSATNPPLGPVSRAEVT--TEPL 619
Query: 426 GVFPNQTQPPVEGSP 440
P T+ +E P
Sbjct: 620 AAVP--TRSALEQEP 632
>sp|Q96MT1|RN145_HUMAN RING finger protein 145 OS=Homo sapiens GN=RNF145 PE=2 SV=2
Length = 663
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 307 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 366
K F+ R A+ + +LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 507 KSFLLRRDAVNKI-KSLPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 565
Query: 367 DQGLNEMYSCPTCR 380
+ E +CP C
Sbjct: 566 Y--VQE--TCPLCH 575
>sp|Q75CC8|HRD1_ASHGO ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HRD1 PE=3 SV=2
Length = 575
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 319 LHAALPDATSEELRAYDDECAICREPM----------AKAKKLLCNHLFHLACLRSWLDQ 368
L+ L D + E+L D C IC + M +AK L C H+ H CL+SW+++
Sbjct: 301 LYEKLSDVSEEQLDDTDSMCIICMDDMLPTTETTKMNRRAKMLPCGHMLHFGCLKSWMER 360
Query: 369 GLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQ 416
+CP CR +F A ++ E + + L + G+D
Sbjct: 361 S----QTCPICRLSVFANDSNSHATTQAREQTPPDLLQER---GIDEH 401
>sp|Q8WU17|RN139_HUMAN E3 ubiquitin-protein ligase RNF139 OS=Homo sapiens GN=RNF139 PE=1
SV=1
Length = 664
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 307 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 365
K F+ R A+ +++ LP+ L+ +D CAIC + ++ CNH FH CLR W
Sbjct: 517 KTFMNRRTAVKKINS-LPEIKGSRLQEINDVCAICYHEFTTSARITPCNHYFHALCLRKW 575
Query: 366 LDQGLNEMYSCPTCRKPLFVGRREIEANS 394
L +CP C + +++ +I+ NS
Sbjct: 576 ----LYIQDTCPMCHQKVYI-EDDIKDNS 599
>sp|Q5RBT7|RN139_PONAB E3 ubiquitin-protein ligase RNF139 OS=Pongo abelii GN=RNF139 PE=2
SV=1
Length = 664
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 307 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 365
K F+ R A+ +++ LP+ L+ +D CAIC + ++ CNH FH CLR W
Sbjct: 517 KTFMNRRTAVKKINS-LPEIKGSRLQEINDVCAICYHEFTTSARITPCNHYFHALCLRKW 575
Query: 366 LDQGLNEMYSCPTCRKPLFVGRREIEANS 394
L +CP C + +++ +I+ NS
Sbjct: 576 ----LYIQDTCPMCHQKVYI-EDDIKDNS 599
>sp|Q5BIY5|RN145_XENLA RING finger protein 145 OS=Xenopus laevis GN=rnf145 PE=2 SV=1
Length = 695
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 307 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 366
K F+ R A+ + + LP +T E+L ++D C+IC + M A C+H FH CL+ WL
Sbjct: 507 KSFLLRRDAVNKIKS-LPVSTKEQLEQHNDICSICYQDMNSAVITPCSHFFHPGCLKKWL 565
Query: 367 DQGLNEMYSCPTCR 380
+ E +CP C
Sbjct: 566 --YVQE--TCPLCH 575
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 337 ECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383
EC +C+E A ++L CNHLFH +C+ WL+Q SCP CRK L
Sbjct: 230 ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSL 275
>sp|P90859|HRDL1_CAEEL E3 ubiquitin-protein ligase hrd-like protein 1 OS=Caenorhabditis
elegans GN=hrdl-1 PE=1 SV=2
Length = 564
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 134/343 (39%), Gaps = 51/343 (14%)
Query: 72 FVLINLCLKTIF---FGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGL-WSVW 127
F ++ +C + I F EL E + YV+ +L +VI P + W +W
Sbjct: 95 FAILAVCTRLIIKLTFKELARQEENVARQAFFCYVLLTIVYLSVVIGPQKGHRVMPWMIW 154
Query: 128 LTVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTL 187
+ L Q + RL+ + SPS + F +L F+ V I + L
Sbjct: 155 GGICAFLSHLQFITCQRLKHI--SPSCDRGSQKISFLSL-FLFFVSIAMTFLISRFQHHL 211
Query: 188 DSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLL 247
+LL+F+ L F + + F +++ +
Sbjct: 212 TWQPAVLLYFDCLLAVFRSTYIL---------------------------FRCISSSRVF 244
Query: 248 EWKGILIRNFGFFLDMAT-----LLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAI 302
+ +R+F ++L++ T L+ L + + G+ +L +++ + +
Sbjct: 245 SFNPDSVRHFNYWLELITNFVCELIQMLSFAQLLAFSPGL--NLTSIFFLYHMKLTYNCM 302
Query: 303 IKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACL 362
+++ + H+ + P S + DD C +C E + +++L C+H FH CL
Sbjct: 303 TEQLSRHRNHKKIFEHIERSYP---SVKCANGDDRCVVCWELLGTSRRLPCSHQFHDWCL 359
Query: 363 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 405
WL Q SCPTCR + + +I +P EV + +L
Sbjct: 360 MWWLAQD----SSCPTCRCTIPSPQDQIR---QPPEVGNSTRL 395
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 337 ECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIE 391
EC IC+E + K ++L C H FH CL+ WLD E SCP CR L ++ E
Sbjct: 229 ECCICKENLVIGDKMQELPCKHTFHPPCLKPWLD----EHNSCPICRHELPTDDQKYE 282
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 337 ECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRK 381
EC +C++ A + ++L CNHLFH C+ WL+Q SCP CRK
Sbjct: 228 ECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQ----HDSCPVCRK 271
>sp|Q08109|HRD1_YEAST ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HRD1 PE=1
SV=1
Length = 551
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 20/83 (24%)
Query: 318 HLHAALPDATSEELR--AYDDE-CAICREPM-------------AKAKKLLCNHLFHLAC 361
L L T E+L+ A DD C IC + + K K+L C H+ HL+C
Sbjct: 326 QLDDTLVTVTVEQLQNSANDDNICIICMDELIHSPNQQTWKNKNKKPKRLPCGHILHLSC 385
Query: 362 LRSWLDQGLNEMYSCPTCRKPLF 384
L++W+++ +CP CR P+F
Sbjct: 386 LKNWMERS----QTCPICRLPVF 404
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 337 ECAICREPMAKAKKLL----CNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV----GRR 388
EC++C + + L C+H FHL C+ +WL N CP CR P+ + +
Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKN----CPLCRAPVLLITEPPHQ 189
Query: 389 EIEANSRPGEVSSDEQLARQLSMGLDRQNN 418
E E N +P SS++ RQ S R +N
Sbjct: 190 ETETNHQPDSESSNDLRGRQDSSRSRRNHN 219
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 312 LRIALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSW-LD 367
L+ A G L + EE+ D C IC E P + L C H FH C+ W L
Sbjct: 230 LQNAFGQLQLRVVKEGDEEINPNGDSCVICFEHYKPNDIVRILTCKHFFHKNCIDPWILS 289
Query: 368 QGLNEMYSCPTCR----KPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTL 423
G +CP C+ K L + + ++E + P +V +L LS + NN +
Sbjct: 290 HG-----TCPICKCDILKVLGI-QVDVENGTEPLQVLMSSELCETLSPSEEETNN--EVS 341
Query: 424 PTG 426
P G
Sbjct: 342 PAG 344
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query: 275 HIWWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAY 334
+ W G+ + + A ++I+ ++I H+ + L
Sbjct: 177 YAWGANGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGL----------- 225
Query: 335 DDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383
EC +C+E ++L CNHLFH C+ WL+Q +CP CRK L
Sbjct: 226 --ECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQ----HDTCPVCRKSL 271
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 328 SEELRAYDDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383
+EE + EC +C+E ++L CNHLFH C+ WL+Q +CP CRK L
Sbjct: 218 TEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQ----HDTCPVCRKSL 272
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 303 IKRIKGFIKLRIALGHLHAALP-DATSEELRAYDDECAICREPMAKAKKLLC---NHLFH 358
I+ + F ++ + LG L A + D ++E R C +CR+ K +LC N FH
Sbjct: 1156 IREAQTFSRMHVLLGMLDACIKWDMSAENAR-----CKVCRKKGEDDKLILCDECNKAFH 1210
Query: 359 LACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSR 395
L CLR L + + + CP C+ P RR NSR
Sbjct: 1211 LFCLRPALYEVPDGEWQCPACQPP--TARR----NSR 1241
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 313 RIALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQG 369
+ A+G L +E+ D CA+C E P + L CNH+FH C+ W
Sbjct: 252 KKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPW---- 307
Query: 370 LNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGV 427
L E +CP C+ + IE + G VS ++ ++S ++N +T +G
Sbjct: 308 LLEHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGY 366
Query: 428 FPNQ--TQPPVE 437
Q +PP+E
Sbjct: 367 ASVQGTDEPPLE 378
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 313 RIALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQG 369
+ A+G L +E+ D CA+C E P + L CNH+FH C+ W
Sbjct: 255 KKAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKTCVDPW---- 310
Query: 370 LNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGV 427
L E +CP C+ + IE + G VS ++ + S ++N +T +G
Sbjct: 311 LLEHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNETSSNASPHEEDNRSETASSGY 369
Query: 428 FPNQ--TQPPVE 437
Q +PP+E
Sbjct: 370 ASVQGADEPPLE 381
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 337 ECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383
EC +C++ ++L CNHLFH C+ WL+Q SCP CRK L
Sbjct: 231 ECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQ----HDSCPVCRKSL 276
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 20/112 (17%)
Query: 275 HIWWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAY 334
+ W G+ + + A ++I+ ++I H+ + L
Sbjct: 178 YAWGANGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITEEHVGSGL----------- 226
Query: 335 DDECAICREPMAKA---KKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383
EC +C+E ++L CNHLFH C+ WL+Q +CP CRK L
Sbjct: 227 --ECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQ----HDTCPVCRKSL 272
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 313 RIALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQG 369
+ A+G L E+ D CA+C E P + L CNH+FH C+ W
Sbjct: 252 KKAIGRLQLRTLKQGDREIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPW---- 307
Query: 370 LNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGV 427
L E +CP C+ + IE + G VS ++ ++S ++N +T +G
Sbjct: 308 LLEHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGY 366
Query: 428 FPNQ--TQPPVE 437
Q +PP+E
Sbjct: 367 ASVQGADEPPLE 378
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 27/199 (13%)
Query: 196 FFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLLEWKGILIR 255
F + + VA E HG + + I+ GN + F+ + + KG+ I
Sbjct: 112 FTQKIKVASE-------HGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIGNIKGMEIL 164
Query: 256 NFGFFLDMATLLMALGHYIHIWWLRG--MAFHLVDA-----ILFLNIRALLSAII--KRI 306
+ T+++ +G H+ WL ++F +V F +IR L A I +R
Sbjct: 165 HLIRKGVHVTVMVEVGRK-HVIWLNHYFVSFMIVTTATLAYFTFYHIRRLWVARIENRRW 223
Query: 307 KGFIK-LRIALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACL 362
K + L+ A G L + EE+ D C IC E P + L C H FH C+
Sbjct: 224 KRLTRELKKAFGQLQVRVLKEGDEEVNPNADSCVICFEAYKPNEIVRILTCKHFFHKNCI 283
Query: 363 RSW-LDQGLNEMYSCPTCR 380
W L G +CP C+
Sbjct: 284 DPWILAHG-----TCPMCK 297
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 304 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKA---KKLLCNHLFHLA 360
KR+K + + A+G L + L D CA+C EP + + L CNH FH
Sbjct: 228 KRLKA--EAKKAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRILTCNHFFHKN 285
Query: 361 CLRSWLDQGLNEMYSCPTCR----KPLFVGRREIEANS 394
C+ W L E +CP C+ K L + E E S
Sbjct: 286 CIDPW----LLEHRTCPMCKCDILKSLGIAEDEEEGTS 319
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 329 EELRAYDDECAIC---REPMAKAKKL-LCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLF 384
E D +C++C +P K +++ +C H FH+ C+ W L +CP CR L
Sbjct: 91 ESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLW----LTSHTTCPLCRLALI 146
Query: 385 VGR-REIEANSRPGEVSSDEQLARQ 408
R R+ + + P VS DE+++ Q
Sbjct: 147 PSRSRQSQDDPVPSLVSPDEEVSSQ 171
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 16/76 (21%)
Query: 335 DDECAICREPMAKAKK---LLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGR---- 387
D EC++C+EP + +K L C H FH C+ W L + SCP CR L
Sbjct: 67 DLECSVCKEPAEEGQKYRILPCKHEFHEECILLW----LKKTNSCPLCRYELETDDPVYE 122
Query: 388 -----REIEANSRPGE 398
R+ EAN R E
Sbjct: 123 ELRRFRQDEANRRERE 138
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 265 TLLMALGHYIHIWWLRG--MAFHLVDA-----ILFLNIRALLSAII--KRIKGFIK-LRI 314
T+++ +G H+ WL ++F +V F +IR L A I +R K + L+
Sbjct: 174 TVMVEVGRK-HVIWLNHYFVSFMIVTTATLAYFTFYHIRRLWVARIEDRRWKRLTRELKK 232
Query: 315 ALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSW-LDQGL 370
A G L + EE+ D C IC E P + L C H FH C+ W L G
Sbjct: 233 AFGQLQVRILKEGDEEVSPNADSCVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAHG- 291
Query: 371 NEMYSCPTCRKPLFVG---RREIE----------ANSRPGEVSS-DEQLARQLSMGLDRQ 416
+CP C+ + + +IE +N PG S+ +E+L +L
Sbjct: 292 ----TCPMCKCDILKALGIQMDIEDGSDSLQVLMSNELPGTFSAMEEELNNELPPARTSS 347
Query: 417 NNTG-QTLPTGVFPNQTQPP 435
T Q PT V +QPP
Sbjct: 348 KVTHVQEHPTSVNVG-SQPP 366
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 322 ALP--DATSEELRAYDDECAICR---EPMAKAKKLLCNHLFHLACLRSWLDQGLNEMY-S 375
ALP + T L + ++CA+C E +AK++ C HL+H CL WL E++ S
Sbjct: 206 ALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWL-----ELHNS 260
Query: 376 CPTCRKPLFVGRREIEANSRPGEVSS---DEQLARQLSMGLDR 415
CP CR L + E R + +S D + Q S G +R
Sbjct: 261 CPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNR 303
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 337 ECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383
EC +C+E K ++L CNH FH +C+ WL+ L++ +CP CRK L
Sbjct: 228 ECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE--LHD--TCPVCRKSL 273
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 312 LRIALGHLHAALPDATSEELRAYDDECAIC---REPMAKAKKLLCNHLFHLACLRSWLDQ 368
+R A+G L + +EL +D C +C +P + L C H+FH AC+ WL
Sbjct: 230 VRKAIGKLQLRVLQEGDKELEPDEDNCVVCFDIYKPQDVVRILTCKHIFHKACIDPWLL- 288
Query: 369 GLNEMYSCPTCR 380
+CP C+
Sbjct: 289 ---AHRTCPMCK 297
>sp|Q9FGJ6|ATL79_ARATH RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2
SV=1
Length = 166
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 24/124 (19%)
Query: 290 ILFLNIRALLSAI--IKRIKGFIKLRIALGHLHAALPDATSE--------------ELRA 333
+L L I AL+ A+ I+ F++ + H P+A + EL
Sbjct: 43 LLILVISALICALSLYAAIRCFLRPTLETEDDHKPDPEAAASSTPTTPTLVYSSDLELAG 102
Query: 334 YDDECAICREPMAKAKKLL----CNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRRE 389
+ ECAIC + + + C H FH+ C+ W L+ SCPTCR +F E
Sbjct: 103 AEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKW----LSTRSSCPTCRTSIFSQHSE 158
Query: 390 IEAN 393
++
Sbjct: 159 TPSS 162
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 16/123 (13%)
Query: 312 LRIALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSW-LD 367
L+ G L + EE+ D C IC E P + L C H FH C+ W L
Sbjct: 230 LQNTFGQLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWILP 289
Query: 368 QGLNEMYSCPTCR----KPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTL 423
G +CP C+ K L + + +E + P +V +L LS + NN +
Sbjct: 290 HG-----TCPICKCDILKVLGI-QVVVENGTEPLQVLMSNELPETLSPSEEETNN--EVS 341
Query: 424 PTG 426
P G
Sbjct: 342 PAG 344
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 303 IKRIKGFIKLRIALGHLHAALP-DATSEELRAYDDECAICREPMAKAKKLLC---NHLFH 358
I+ + F ++ + LG L A + D ++E R C +CR+ K +LC N FH
Sbjct: 1156 IREAQTFSRMHVLLGMLDACIKWDMSAENAR-----CKVCRKKGEDDKLILCDECNKAFH 1210
Query: 359 LACLRSWLDQGLNEMYSCPTCR 380
L CLR L + + + CP C+
Sbjct: 1211 LFCLRPALYEVPDGEWQCPACQ 1232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,784,437
Number of Sequences: 539616
Number of extensions: 6117913
Number of successful extensions: 18876
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 479
Number of HSP's that attempted gapping in prelim test: 18595
Number of HSP's gapped (non-prelim): 594
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 63 (28.9 bits)