BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 013470
         (442 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/435 (60%), Positives = 313/435 (71%), Gaps = 54/435 (12%)

Query: 25  EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLA 81
           E E ++   V++WSWGAGTDGQLGT RL DE  PQLL+L   SS   +S+LACGGAHVLA
Sbjct: 3   ENERDKGGEVEIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLA 62

Query: 82  LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
           LT+      GKV +WGRG+SGQLGHG+MV +L PK V   +   + +TH+SAGW+HSGFV
Sbjct: 63  LTTD-----GKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLE--SFVMTHVSAGWSHSGFV 115

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           SD+GCLFTCGDG+FGQLGHGD +SH SPVKVS F +K+V QIACGMRHSLVLLK   G+Q
Sbjct: 116 SDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLK---GDQ 172

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           VYGFGSGKRGQLGVS D  RS+S+PQ T+GL  +EI+ I ANGD SAALSA GHLYTWGR
Sbjct: 173 VYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGR 232

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           GF STSDV+CP+ LPSSL F+Q ALGWNH+LVLTG GEV MLGG+ HG+L DP++ S  +
Sbjct: 233 GFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVK 292

Query: 322 PLSVA--------------LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
            LSV               LEKV  LDG+ V+QIAAGAEHSA+VT               
Sbjct: 293 HLSVIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVT--------------- 337

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                      ENR I TWGWGEHGQLGLGNT DQI P+ V LG     + T ++V+CGS
Sbjct: 338 -----------ENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGS 386

Query: 428 GFTYAISRHCLPSQT 442
           GFT+AI +  +PSQT
Sbjct: 387 GFTFAI-KAVIPSQT 400


>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/436 (60%), Positives = 317/436 (72%), Gaps = 44/436 (10%)

Query: 18  NNAKPKIEEEEEEQQ-VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLA 73
           +N    +EE E ++   V++WSWGAGTDGQLGT RL DE  PQLL+L   SS   +S+LA
Sbjct: 3   HNTNTMMEENERDKGGEVEIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLA 62

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CGGAHVLALT+      GKV +WGRG+SGQLGHG+MV +L PK V   +   + +TH+SA
Sbjct: 63  CGGAHVLALTTD-----GKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLE--SFVMTHVSA 115

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           GW+HSGFVSD+GCLFTCGDG+FGQLGHGD +SH SPVKVS F +K+V QIACGMRHSLVL
Sbjct: 116 GWSHSGFVSDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVL 175

Query: 194 LKDC--LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
           LK     G+QVYGFGSGKRGQLGVS D  RS+S+PQ T+GL  +EI+ I ANGD SAALS
Sbjct: 176 LKGTGLSGDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALS 235

Query: 252 AEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           A GHLYTWGRGF STSDV+CP+ LPSSL F+Q ALGWNH+LVLTG GEV MLGG+ HG+L
Sbjct: 236 ANGHLYTWGRGFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVL 295

Query: 312 SDPERVSSTRPLSVA-----LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
            DP++ S  + LS       LEKV  LDG+ V+QIAAGAEHSA+VTG             
Sbjct: 296 GDPQKGSQVKHLSEESREENLEKVQGLDGLNVVQIAAGAEHSALVTG------------- 342

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 426
                   N++     I TWGWGEHGQLGLGNT DQI P+ V LG     + T ++V+CG
Sbjct: 343 --------NIL----VIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCG 390

Query: 427 SGFTYAISRHCLPSQT 442
           SGFT+AI +  +PSQT
Sbjct: 391 SGFTFAI-KAVIPSQT 405


>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
 gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
          Length = 390

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/421 (59%), Positives = 306/421 (72%), Gaps = 54/421 (12%)

Query: 21  KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL---SSLSSVSMLACGGA 77
           + K +EEE +QQ  ++WSWGAGT+GQLGTG+L DE  PQLL+L   SS  S+S LACGGA
Sbjct: 3   EAKRDEEESKQQ--QIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGA 60

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           HV+ALTS     GG+VF+WGRG++GQLGHGEM+++L+PKPV+        ITH+SAGW+H
Sbjct: 61  HVIALTS-----GGRVFTWGRGTTGQLGHGEMLNSLHPKPVSSL--QSCVITHVSAGWSH 113

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           SGFVSD G LFTCGDG+FGQLG G+YRS S+PVKV  F N  V+QIACGMRHSLVLL   
Sbjct: 114 SGFVSDIGLLFTCGDGSFGQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLLN-- 171

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            GNQVYGFGSGKRGQLG+S+D+ +S++LPQVT GL D++IV ISANGD SAA+SA+GHLY
Sbjct: 172 -GNQVYGFGSGKRGQLGISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLY 230

Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
           TWGRGF   SD N PQ   SSL  ++AALGWNH L+LTGD EVLMLGG++HG+L D E++
Sbjct: 231 TWGRGFAGASDANFPQLSLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKM 290

Query: 318 SST--RPLS---VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           S+   RP      AL +V  LDGVKV++IAAGAEHSA                       
Sbjct: 291 SAVKHRPEDSPGTALNEVIGLDGVKVVKIAAGAEHSA----------------------- 327

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                      +TWGWGEHGQLGLGNT DQ  P+ V+L  + QN++  L V+CGSGFT+A
Sbjct: 328 -----------LTWGWGEHGQLGLGNTNDQTIPQTVSLIPDIQNKEASLNVYCGSGFTFA 376

Query: 433 I 433
           I
Sbjct: 377 I 377


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/423 (57%), Positives = 300/423 (70%), Gaps = 42/423 (9%)

Query: 17  INNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG 76
           +   K    E+++++   +VWSWGAGT+GQLGT  L DE  PQLL+  SLSS+S LACGG
Sbjct: 1   MEEPKKTENEDDKDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGG 60

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGW 135
           AHV+ALTS      GKV SWGRG+SGQLGHG +V ++LYPK VT  DG  Y ITH+SAGW
Sbjct: 61  AHVIALTSA-----GKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDG--YFITHVSAGW 113

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            HSGFVSD+GC+FTCGDG+FGQLGHGD+ SH SPVKVS FV+++V Q+ACGMRHSLVLLK
Sbjct: 114 GHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLK 173

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
              GNQVYGFGSGKRGQLGVS DR++SV++P+V  G   +EI GI+ANGD SAA+S +GH
Sbjct: 174 ---GNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGH 230

Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           +YTWGRGF    D   PQ L SSL+F++ ALGWNH L ++G+GEV MLGG+H G+LSD +
Sbjct: 231 VYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQ 290

Query: 316 RVSSTRPL----SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
            +S  + L     V LEKV  LDG K+  IA GAEHS +VT                   
Sbjct: 291 NISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVT------------------- 331

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                  E+  I TWGWGEHGQLGLG+T D+I P  V+LG +  N    + VFCGSGFT+
Sbjct: 332 -------EHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDL-NEAASVIVFCGSGFTF 383

Query: 432 AIS 434
           A++
Sbjct: 384 AVT 386


>gi|357486571|ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355514908|gb|AES96531.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 615

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/447 (55%), Positives = 297/447 (66%), Gaps = 65/447 (14%)

Query: 24  IEEEEE---EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVL 80
           +EE E+   E+++ ++WSWGAGTDGQLGTGRL DE  PQ L+LS  S  S+ ACGGAHV+
Sbjct: 198 MEESEQVKIEEKIERLWSWGAGTDGQLGTGRLQDEQIPQQLSLSLPSVSSL-ACGGAHVI 256

Query: 81  ALTSPS---------------------------SVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           ALTS                                 GKV SWGRG+SGQLGHGE+V+ L
Sbjct: 257 ALTSAQMEKVVRDIDLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNL 316

Query: 114 -YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
            YPK +T  D   Y ITH+SAGW HSGFVSDSGCLFTCGDG+FGQLGHGDY SHSSP+KV
Sbjct: 317 LYPKAITSLD--NYFITHVSAGWGHSGFVSDSGCLFTCGDGSFGQLGHGDYASHSSPIKV 374

Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
           SSFV++NV Q+ACGMRHSLVLLK CL NQVYGFGSGKRGQLGVSKD+I+S++LP+V  G 
Sbjct: 375 SSFVDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISGF 434

Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVL 292
            D EIVGISANGD SAALS +GHLYTWGRGF    D + PQ L S+  F++  LGWNH L
Sbjct: 435 EDEEIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHAL 494

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPL----SVALEKVSNLDGVKVIQIAAGAEHS 348
            +TG+G+V MLGG+H G+LSD       + L       LEK   LDG K+  IA GAEHS
Sbjct: 495 AMTGEGKVYMLGGNHLGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHS 554

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +VT                          EN  I TWGWGEHGQLGLG+  D+I P  V
Sbjct: 555 VLVT--------------------------ENGEIKTWGWGEHGQLGLGDDGDRISPVTV 588

Query: 409 NLGDEFQNRDTQLEVFCGSGFTYAISR 435
           NLG +  N    + V+CGSGFT+A+++
Sbjct: 589 NLGYDL-NEAASIRVYCGSGFTFALTK 614


>gi|8778856|gb|AAF79855.1|AC000348_8 T7N9.12 [Arabidopsis thaliana]
          Length = 441

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/436 (56%), Positives = 303/436 (69%), Gaps = 34/436 (7%)

Query: 25  EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           E + +E++  +VWSWGAGTDGQLGT +L DEL PQLL+L+SL S+SMLACGGAHV+ALTS
Sbjct: 6   ETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTS 65

Query: 85  --PSSV--------------------IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
             P  +                     GGKVF+WGRGSSGQLGHG++++   PK V+FFD
Sbjct: 66  GKPPKISLIKGMLLVLVQVNILIMLFAGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFD 125

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
                IT  +AGW+HSGFVSDSGC+FTCG+G+FGQLGHGD  S S+P KVS F N +V  
Sbjct: 126 --DSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKM 183

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           +ACGMRHSLVL     GNQV GFGSGKRGQLG S DRI+SV+LP V  GL D+E+V ISA
Sbjct: 184 VACGMRHSLVLFA---GNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISA 240

Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
           NGD SAA+SA+G  ++WGRGF    DV+ PQSLPS LSF + A+GWNH L+LT DGEV  
Sbjct: 241 NGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFK 300

Query: 303 LGGSHHGMLSDPERVSSTRPLSVAL-EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
           LG +   +   PE+       S AL EKV + DGVKV+QIAAGAEHSA VTGK     L 
Sbjct: 301 LGST---LNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTGKRGGAILL 357

Query: 362 IIS--YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
            +S  ++          +AEN  + TWGWGEHGQLGLGNT DQ  P++V+LG     R  
Sbjct: 358 FLSSLHSANIKQTTFECLAENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLG-SIDLRTK 416

Query: 420 QLEVFCGSGFTYAISR 435
           +++V+CGSGFTYA+ R
Sbjct: 417 EIKVYCGSGFTYAVKR 432


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/414 (58%), Positives = 293/414 (70%), Gaps = 50/414 (12%)

Query: 26  EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSP 85
           +EEEEQQV   WSWGAGTDGQLGT +L DEL PQLL+L+SL S+SMLACGGAHV+ALTS 
Sbjct: 10  DEEEEQQV---WSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSD 66

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
                GKVF+WGRGSSGQLGHG++++   PK V+FFDG  Y IT  +AGW+HSGFVSDSG
Sbjct: 67  -----GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDG--YVITQAAAGWSHSGFVSDSG 119

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           CLFTCG+G+FGQLGHGD  S  +P KVS F N++V  +ACGMRHSLVLL    GNQV GF
Sbjct: 120 CLFTCGNGSFGQLGHGDNMSLRTPAKVSYFSNESVKMVACGMRHSLVLLA---GNQVCGF 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
           GSGKRGQLG + D  +SV+LP V  GL D+E+  ISANGD SAA+SA+G  ++WGRGF +
Sbjct: 177 GSGKRGQLGFTSDGTKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRGFCA 236

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER----VSSTR 321
             DV  PQ LPSSLSF + A+GWNH L+LT DGEV  LG +   +   PE+    + S+ 
Sbjct: 237 GPDVQTPQCLPSSLSFRKVAVGWNHALLLTVDGEVFKLGNT---LNKQPEKQQLQIDSSE 293

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
            L   L KVS+ DGVKV+QIAAGAEHSA VT                          EN 
Sbjct: 294 AL---LAKVSDFDGVKVLQIAAGAEHSAAVT--------------------------ENG 324

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            + TWGWGEHGQLGLGNT DQ  P++V++G     R  +++V+CGSGFTYA+ R
Sbjct: 325 KVKTWGWGEHGQLGLGNTNDQTSPQLVSVG-SIDLRTKEIKVYCGSGFTYAVRR 377


>gi|255558248|ref|XP_002520151.1| protein with unknown function [Ricinus communis]
 gi|223540643|gb|EEF42206.1| protein with unknown function [Ricinus communis]
          Length = 387

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/426 (56%), Positives = 294/426 (69%), Gaps = 45/426 (10%)

Query: 19  NAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGG 76
           N K K++E EE +   +VWSWGAGTDGQLGTG+L DE  PQLL   SLS   +S LACGG
Sbjct: 5   NKKVKVKETEEREHEQQVWSWGAGTDGQLGTGKLEDEHLPQLLQFPSLSVRPISSLACGG 64

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AHV+AL S      GKV +WGRG+SGQLGHG M+ +++P+PVTF D   + ITHISAGW+
Sbjct: 65  AHVIALNSGD----GKVLTWGRGTSGQLGHGNMLSSVHPQPVTFLD--SFVITHISAGWS 118

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HSGFVSD GC+FTCGDG+FGQLGHGD  SH++PV+VS F N++VHQIACGMRHSLVLLK 
Sbjct: 119 HSGFVSDKGCVFTCGDGSFGQLGHGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLK- 177

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
             GNQVYGFGSGKRGQLG+SKD+I+S+SLP VT G  DI+I  I  NGD SAALS +GHL
Sbjct: 178 --GNQVYGFGSGKRGQLGISKDKIKSISLPLVTCGFEDIKINSIITNGDHSAALSVDGHL 235

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           YTWGRGF  TSDV  P+ L SSL F + ALGWNH L LTG+     +  S          
Sbjct: 236 YTWGRGFPGTSDVFTPRHLVSSLQFIKVALGWNHALALTGNFFFFCVWMS---------V 286

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
                P     ++VS LDG+KV+ IAAG+EHSA++TGK                      
Sbjct: 287 CVYCDPTHAIFDRVSILDGMKVVDIAAGSEHSALLTGKM--------------------- 325

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
              +  I TWGWGEHGQLGLG+T DQ +P+ V+L  E +N++  L+V+CGSGFT+ + R 
Sbjct: 326 ---DGTIKTWGWGEHGQLGLGSTKDQTNPQSVSLDHEAENQEINLKVYCGSGFTFVV-RS 381

Query: 437 CLPSQT 442
              SQT
Sbjct: 382 LSTSQT 387


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/422 (57%), Positives = 294/422 (69%), Gaps = 45/422 (10%)

Query: 18  NNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGA 77
           N  + + + +E EQ   +VWSWGAGT+GQLGT  L DE  PQLL+  SLSS+S LACGGA
Sbjct: 5   NKTENEDDRDESEQ---RVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGA 61

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWN 136
           HV+ALTS      GK  SWGRG+SGQLGHGE+V + LYPK VT  DG  Y ITH+SAGW+
Sbjct: 62  HVIALTSA-----GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDG--YFITHVSAGWS 114

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HSGFVSD+G +FTCGDG+FGQLGHGD  SH SPVKVS FV+ +V Q+ACGMRHSLVLLK 
Sbjct: 115 HSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLK- 173

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
             GNQVYGFGSGKRGQLGVS DR++SV++P+V  G   +EIVG +ANGD SAA+S +GH+
Sbjct: 174 --GNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHV 231

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           YTWGRGF    D + PQ L SSL+F++ ALGWNH L ++G+GEV MLGG+H G+LSD + 
Sbjct: 232 YTWGRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQN 291

Query: 317 VSSTRPL----SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           +   +         LEKV  LDG K+  IAAGAEHS +VT                    
Sbjct: 292 IGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVT-------------------- 331

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                 E+  I TWGWGEHGQLGLG+T DQ  P  V+L D   N    + VFCGSGFT+A
Sbjct: 332 ------EHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSL-DYDLNEAASIRVFCGSGFTFA 384

Query: 433 IS 434
           ++
Sbjct: 385 VT 386


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/412 (58%), Positives = 292/412 (70%), Gaps = 41/412 (9%)

Query: 25  EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           E + +E++  +VWSWGAGTDGQLGT +L DEL PQLL+L+SL S+SMLACGGAHV+ALTS
Sbjct: 6   ETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTS 65

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                GGKVF+WGRGSSGQLGHG++++   PK V+FFD     IT  +AGW+HSGFVSDS
Sbjct: 66  -----GGKVFTWGRGSSGQLGHGDILNITLPKLVSFFD--DSVITQAAAGWSHSGFVSDS 118

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           GC+FTCG+G+FGQLGHGD  S S+P KVS F N +V  +ACGMRHSLVL     GNQV G
Sbjct: 119 GCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFA---GNQVCG 175

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           FGSGKRGQLG S DRI+SV+LP V  GL D+E+V ISANGD SAA+SA+G  ++WGRGF 
Sbjct: 176 FGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFC 235

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
              DV+ PQSLPS LSF + A+GWNH L+LT DGEV  LG +   +   PE+       S
Sbjct: 236 GGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGST---LNKQPEKQQLQIDSS 292

Query: 325 VAL-EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            AL EKV + DGVKV+QIAAGAEHSA VT                          EN  +
Sbjct: 293 EALFEKVPDFDGVKVMQIAAGAEHSAAVT--------------------------ENGEV 326

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            TWGWGEHGQLGLGNT DQ  P++V+LG     R  +++V+CGSGFTYA+ R
Sbjct: 327 KTWGWGEHGQLGLGNTNDQTSPELVSLG-SIDLRTKEIKVYCGSGFTYAVKR 377


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/425 (54%), Positives = 291/425 (68%), Gaps = 47/425 (11%)

Query: 24  IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVL 80
           +++ E+E     +WSWGAGTD QLGTGRL D   PQL+   SLSS   +S L+CGGAHV+
Sbjct: 223 VDDVEQE-----LWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVI 277

Query: 81  ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
           ALT+     GG V +WGRG+SGQLG G+M+ +L+PKPV       Y ITH+SAGW+HSGF
Sbjct: 278 ALTA-----GGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGS--YFITHVSAGWSHSGF 330

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           VSD G L+TCGDG+FGQLGHGDY+    P +V  F +K+V +IACGMRHSL L+K   G 
Sbjct: 331 VSDEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGE 390

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           QVYGFG+GKRGQLG+SK +I++V+LP ++  L   EIVGI+A GD SAALSAEGHLYTWG
Sbjct: 391 QVYGFGAGKRGQLGISK-KIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWG 449

Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
           RGF STSDV  PQ LPS  SFS+ ALGWNH LVLT +GE+ MLGG HHG LSD E ++S 
Sbjct: 450 RGFKSTSDVYSPQHLPSPSSFSKVALGWNHALVLTDEGELYMLGGKHHGALSDSEMLNSM 509

Query: 321 RPL-----SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
           + L         + V  L G+KV+ IAAGAEHS +VT                       
Sbjct: 510 KSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVT----------------------- 546

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
              E+  + TWGWGEHGQLGLG+TCD  +P+ VNL  + ++    ++V+CGSGFT A++ 
Sbjct: 547 ---EDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVAT 603

Query: 436 HCLPS 440
             LP+
Sbjct: 604 SNLPN 608


>gi|449478696|ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/368 (57%), Positives = 254/368 (69%), Gaps = 42/368 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGG 91
           ++WSWGAGTD QLGTGRL D   PQL+   SLSS   +S L+CGGAHV+ALT+     GG
Sbjct: 229 ELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA-----GG 283

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            V +WGRG+SGQLG G+M+ +L+PKPV       Y ITH+SAGW+HSGFVSD G L+TCG
Sbjct: 284 GVLTWGRGNSGQLGLGDMISSLHPKPVMRLGS--YFITHVSAGWSHSGFVSDEGKLYTCG 341

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FGQLGHGDY+    P +V  F +K+V +IACGMRHSL L+K   G QVYGFG+GKRG
Sbjct: 342 DGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRG 401

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+SK +I++V+LP ++  L   EIVGI+A GD SAALSAEGHLYTWGRGF STSDV  
Sbjct: 402 QLGISK-KIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWGRGFKSTSDVYS 460

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL-----SVA 326
           PQ LPS  SFS+ ALGWNH LVLT +GE+ MLGG HHG LSD E ++S + L        
Sbjct: 461 PQHLPSPSSFSKVALGWNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDN 520

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
            + V  L G+KV+ IAAGAEHS +VT                          E+  + TW
Sbjct: 521 FQAVPALSGIKVLDIAAGAEHSVIVT--------------------------EDGGVKTW 554

Query: 387 GWGEHGQL 394
           GWGEHGQL
Sbjct: 555 GWGEHGQL 562


>gi|223973351|gb|ACN30863.1| unknown [Zea mays]
          Length = 408

 Score =  331 bits (849), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 206/441 (46%), Positives = 253/441 (57%), Gaps = 57/441 (12%)

Query: 13  KSALINNAKPKI--EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQ--LLNLSSLSS 68
           K A+   A  +I   E EEE  V   WSWGAGTDGQLG G   D   PQ  LL     S 
Sbjct: 2   KEAMAVAALDEIWWREPEEEAPVEWTWSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRSR 61

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           VS +A GGAH +ALTS      G+VF+WGRG+ GQLGHG + +  +PK V F + H  T+
Sbjct: 62  VSFVAGGGAHAIALTSD-----GEVFTWGRGTHGQLGHGNLDNMPHPKLVKFLENH--TV 114

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
           T +SAGWNHSGF +DSG LF CGDG+FGQLG GD  S + P +V+ F   ++ ++A GMR
Sbjct: 115 TCVSAGWNHSGFATDSGQLFMCGDGSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMR 174

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI-RSVSLPQVTIGLHDIEIVGISANGDRS 247
           HSLVLLKD   N VYGFGS +RGQ+G    RI +S ++P++  G  + +IV I ANGD S
Sbjct: 175 HSLVLLKD---NSVYGFGSARRGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHS 231

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           AAL   GHLY WGR      D + P  +  SLS SQ ALGW+H LVL+  GE+  LG   
Sbjct: 232 AALDESGHLYVWGRALIGQHDDDQPSEILPSLSVSQVALGWHHALVLSA-GELYTLGVYR 290

Query: 308 HGMLSDPE------RVSSTRPLSV---------ALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           H     P       + S TR  S           LE V  LDG +V QIA+G EHSA+VT
Sbjct: 291 HQKCDLPGLGNVLGQQSDTRATSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVT 350

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
            K                            + TWGWGEHGQLGLG+T D + P+ VN+GD
Sbjct: 351 DK--------------------------GTVFTWGWGEHGQLGLGDTSDHVAPQRVNVGD 384

Query: 413 EFQNRDTQLEVFCGSGFTYAI 433
             Q       V+CGSGFT A+
Sbjct: 385 NGQGMSGSFAVYCGSGFTVAV 405


>gi|357125330|ref|XP_003564347.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 400

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 195/416 (46%), Positives = 250/416 (60%), Gaps = 55/416 (13%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           W+WGAGTDGQLG+G L D   P  L L       VS +A GGAH +ALTS      G+VF
Sbjct: 20  WTWGAGTDGQLGSGGLEDHHLPHPLLLPPRCRGRVSFVAGGGAHAIALTSD-----GEVF 74

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWGRG+ GQLGHG + +   P  VTFF    YT+T +SAGWNHSGF +DSG LF CGDG+
Sbjct: 75  SWGRGTHGQLGHGNVENIPTPMLVTFFK--NYTVTCVSAGWNHSGFATDSGQLFMCGDGS 132

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG GD +S + P +VSSF  K+V ++A GMRHSLVLLKD   N +YGFGS +RGQ+G
Sbjct: 133 FGQLGTGDNQSRNLPFEVSSFTTKHVEKLAFGMRHSLVLLKD---NSIYGFGSARRGQVG 189

Query: 215 VSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
            S  + + + ++P++  G  + +IV + ANGD SAAL   G LY WGR      D   PQ
Sbjct: 190 KSVCKNQKLHNIPRLIDGFPNRKIVNLYANGDHSAALDESGQLYIWGRALVGEHDDEQPQ 249

Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST----RPLSVA--- 326
           ++  SLS SQ ALGW+H L+L+G GE+  +G   H     P   ++T     P + +   
Sbjct: 250 AVFPSLSISQVALGWHHALLLSG-GELYTIGAYRHQKRETPVLENATAHQFNPTASSSNL 308

Query: 327 --------LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
                   L KV ++ G +V+QIAAG EHSA+VT K                        
Sbjct: 309 HESSSLSNLVKVPSVHGEQVVQIAAGTEHSALVTDK------------------------ 344

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
              A+ TWGWGEHGQLGLG+  DQ+ P+ VNLGD+       L V+CGSGFT A++
Sbjct: 345 --GAVFTWGWGEHGQLGLGDASDQVVPRRVNLGDKSSCSSASLGVYCGSGFTVAVN 398


>gi|218189153|gb|EEC71580.1| hypothetical protein OsI_03953 [Oryza sativa Indica Group]
          Length = 403

 Score =  318 bits (814), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 193/420 (45%), Positives = 241/420 (57%), Gaps = 58/420 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
           V  WSWGAGTDGQLG G   D   PQ L L       VS +A GGAH +ALTS      G
Sbjct: 17  VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 71

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +VF+WGRG+ GQLGHG++ +  +PK V FF+   Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 72  EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 129

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FGQLG GD    + P +V+ F  K+V ++A GMRHSLVLLKD   N VYGFGS +RG
Sbjct: 130 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLKD---NSVYGFGSTRRG 186

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           Q+G      +   +P++  G  D +I  I ANGD SAAL   G LY WGR      D + 
Sbjct: 187 QIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGDHSAALDESGQLYIWGRALIGEHDDDQ 246

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS------- 324
           P+ +  SL  SQ ALGW+H LVL+G  E+  +G   H  L DP  + S  P+        
Sbjct: 247 PRPVFPSLGISQVALGWHHALVLSG--ELYTIGAYRHRKL-DPHVLPSAEPVQRLNPATT 303

Query: 325 ----------VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                       L KV  +DG +V+ IAAG EHSA VT K                    
Sbjct: 304 SHSHDESSSSSTLVKVPCVDGEQVVHIAAGTEHSASVTDK-------------------- 343

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
                   + TWGWGEHGQLGLG+TCDQ+ P+ VN+GD+       + V+CGSGFT A++
Sbjct: 344 ------GTVFTWGWGEHGQLGLGDTCDQVTPQRVNIGDKRPCSSASVNVYCGSGFTIAVN 397


>gi|22202709|dbj|BAC07367.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
          Length = 421

 Score =  317 bits (811), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 193/420 (45%), Positives = 240/420 (57%), Gaps = 58/420 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
           V  WSWGAGTDGQLG G   D   PQ L L       VS +A GGAH +ALTS      G
Sbjct: 15  VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 69

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +VF+WGRG+ GQLGHG++ +  +PK V FF+   Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 70  EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 127

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FGQLG GD    + P +V+ F  K+V ++A GMRHSLVLLKD   N VYGFGS +RG
Sbjct: 128 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLKD---NSVYGFGSTRRG 184

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           Q+G      +   +P++  G  D +I  I ANGD SAAL   G LY WGR      D + 
Sbjct: 185 QIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGDHSAALDESGQLYIWGRALIGEHDDDQ 244

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS------- 324
           P+ +  SL  SQ ALGW+H LVL+G  E+  +G   H  L DP  + S  P+        
Sbjct: 245 PRPVFPSLGISQVALGWHHALVLSG--ELYTIGAYRHRKL-DPHVLPSAEPVQRLNPATT 301

Query: 325 ----------VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                       L KV  +DG +V+ IAAG EHSA VT K                    
Sbjct: 302 SHSHDESSSSSTLVKVPCVDGEQVVHIAAGTEHSASVTDK-------------------- 341

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
                   + TWGWGEHGQLGLG+TCDQ+ P+ VN+GD+       + V+CGSGFT A+ 
Sbjct: 342 ------GTVFTWGWGEHGQLGLGDTCDQVTPQRVNIGDKRPCSSASVNVYCGSGFTIALD 395


>gi|302760239|ref|XP_002963542.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
 gi|300168810|gb|EFJ35413.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
          Length = 360

 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 170/404 (42%), Positives = 218/404 (53%), Gaps = 50/404 (12%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + VWSWGAGT GQLG G + D L PQ ++   L  + M ACGGAH  A+       GG+V
Sbjct: 1   MAVWSWGAGTQGQLGLGTMIDALLPQAMD-PPLRILDM-ACGGAHAAAILD-----GGRV 53

Query: 94  FSWGRGSSGQLGHGE---MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            +WGRG  G  G  E         P  V FF GHR  +  ++AGWNH+ FV++SG LFTC
Sbjct: 54  ATWGRGLIGHEGDSEKDAAAVVAVPSVVEFFGGHR--VCEVAAGWNHTAFVTESGELFTC 111

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG FGQLGHGD+ S  +P KV +    N  ++ACGMRH+LVL  D  G  V  FG  KR
Sbjct: 112 GDGAFGQLGHGDFVSRGTPCKVLAL--SNAFKVACGMRHTLVLSGD--GRVVKAFGLAKR 167

Query: 211 GQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
           GQLG +S   +  V+ PQ    L    +  ++ANGD SAALS  G LY WG+ F+  S  
Sbjct: 168 GQLGSLSSKELNKVASPQAIPSLDSYSVSIVAANGDHSAALSGSGQLYLWGKAFDDQSGA 227

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P      L F + +LGWNH L LT DGE +  G + HG L     +S     ++   +
Sbjct: 228 YVPFLASEELKFHRVSLGWNHGLGLTEDGEAISWGTNRHGQLGSSRCISERS--NIKFYR 285

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           V  L+  +V+ I+AG+EHSA V                               + TWGWG
Sbjct: 286 VQGLEKHRVVSISAGSEHSAAVDAAGD--------------------------LYTWGWG 319

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           EHGQLGLG+  D+ HP  V +G   ++R     V CGSGFT+A 
Sbjct: 320 EHGQLGLGHVNDERHPCRVVVGQCQRSR-----VCCGSGFTFAF 358


>gi|302799553|ref|XP_002981535.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
 gi|300150701|gb|EFJ17350.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
          Length = 360

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/404 (42%), Positives = 218/404 (53%), Gaps = 50/404 (12%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + VWSWGAGT GQLG G + D L PQ ++   L  + M ACGGAH  A+       GG+V
Sbjct: 1   MAVWSWGAGTQGQLGLGTMIDALLPQAMD-PPLRILDM-ACGGAHAAAILD-----GGRV 53

Query: 94  FSWGRGSSGQLGHGE---MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            +WGRG  G  G  E         P  V FF GHR  +  ++AGWNH+ FV++SG LFTC
Sbjct: 54  ATWGRGLIGHEGDSEKDAAAVVAVPSVVEFFGGHR--VCEVAAGWNHTAFVTESGELFTC 111

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG FGQLGHGD+ S  +P KV +    N  ++ACGMRH+LVL  D  G  V  FG  KR
Sbjct: 112 GDGAFGQLGHGDFVSRGTPCKVLAL--SNAFKVACGMRHTLVLSGD--GRVVKAFGLAKR 167

Query: 211 GQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
           GQLG +S   +  V+ PQ    L    +  ++ANGD SAALS  G LY WG+ F+  S  
Sbjct: 168 GQLGSLSSKELNKVASPQAIPSLDSYGVSIVAANGDHSAALSGSGQLYLWGKAFDDQSGA 227

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P      L F + +LGWNH L LT DGE +  G + HG L     +S     ++   +
Sbjct: 228 YVPFLASEELKFHRVSLGWNHGLGLTEDGEAISWGTNRHGQLGSSRCISERS--NIKFYR 285

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           V  L+  +V+ I+AG+EHSA V                               + TWGWG
Sbjct: 286 VQGLEKHRVVSISAGSEHSAAVDAAGD--------------------------LYTWGWG 319

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           EHGQLGLG+  D+ HP  V +G   ++R     V CGSGFT+A 
Sbjct: 320 EHGQLGLGHVNDERHPCRVVVGQCQRSR-----VCCGSGFTFAF 358


>gi|125572225|gb|EAZ13740.1| hypothetical protein OsJ_03662 [Oryza sativa Japonica Group]
          Length = 325

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/323 (48%), Positives = 189/323 (58%), Gaps = 36/323 (11%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
           V  WSWGAGTDGQLG G   D   PQ L L       VS +A GGAH +ALTS      G
Sbjct: 15  VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 69

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +VF+WGRG+ GQLGHG++ +  +PK V FF+   Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 70  EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 127

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FGQLG GD    + P +V+ F  K+V ++A GMRHSLVLLKD   N VYGFGS +RG
Sbjct: 128 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLKD---NSVYGFGSTRRG 184

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           Q+G      +   +P++  G  D +I  I ANGD SAAL   G LY WGR      D + 
Sbjct: 185 QIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGDHSAALDESGQLYIWGRALIGEHDDDQ 244

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
           P+ +  SL  SQ ALGW+H LVL                        S    S  L KV 
Sbjct: 245 PRPVFPSLGISQVALGWHHALVL------------------------SESSSSSTLVKVP 280

Query: 332 NLDGVKVIQIAAGAEHSAVVTGK 354
            +DG +V+ IAAG EHSA VT K
Sbjct: 281 CVDGEQVVHIAAGTEHSASVTDK 303


>gi|168059919|ref|XP_001781947.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666593|gb|EDQ53243.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 415

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/452 (37%), Positives = 228/452 (50%), Gaps = 92/452 (20%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V +VWSWGAGT GQL  G L D L+PQ +  LS  + +  +ACGGAH +A+        
Sbjct: 7   RVREVWSWGAGTHGQLACGTLIDALTPQRVEALSDAALIVDIACGGAHGIAVFEC----- 61

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V +WGRG +G LGHG+      P+ ++   G R  I+H +AGWNHS FV+D+G L+TC
Sbjct: 62  GDVATWGRGQAGALGHGDETTITVPRFISSLQGIR--ISHAAAGWNHSAFVTDNGALYTC 119

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL---KDCLGNQVYGFGS 207
           GDGTFGQLGHG   S   P +V    ++ ++ +ACGMRH+L L         + VY FG 
Sbjct: 120 GDGTFGQLGHGHTESRLVPGRVEHLSSERINMVACGMRHTLALAVTQGSVCTSIVYAFGF 179

Query: 208 GKRGQLGV--------SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            KRGQLG+        SK++    S PQ    L    +V +SANGD SAAL+  G L+ W
Sbjct: 180 NKRGQLGIQMKTNGSESKNKW-CFSCPQRVDSLDMHGVVSVSANGDHSAALTRMGDLFLW 238

Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS- 318
           GRG+N   D   P    S L   Q +LGW H L L G+        S H      E+V+ 
Sbjct: 239 GRGYNDGPDSQQPHLSHSGLKLIQVSLGWRHGLALAGN--------SFHTYTRRSEKVNV 290

Query: 319 ---------------------STRPLS-VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
                                S R +S V  +KV    G++V  I+AG+EHSA V     
Sbjct: 291 AHKSIEQYTREREGKDGAAEKSQRQISGVDFQKVET-QGMRVSWISAGSEHSAAVL---- 345

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG----- 411
                                 E+  IM WGW EHGQLGLG+  DQ  P +V L      
Sbjct: 346 ----------------------EDGRIMMWGWAEHGQLGLGSLEDQEVPHMVTLASTRLS 383

Query: 412 --------DEFQNRD-TQLEVFCGSGFTYAIS 434
                   D+  + +  + +V+CGSG+T+ +S
Sbjct: 384 SGFFSATHDQHASANYVKTKVYCGSGYTFVVS 415


>gi|212274901|ref|NP_001130726.1| uncharacterized protein LOC100191830 [Zea mays]
 gi|194689956|gb|ACF79062.1| unknown [Zea mays]
          Length = 274

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/300 (44%), Positives = 166/300 (55%), Gaps = 46/300 (15%)

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CGDG+FGQLG GD  S + P +V+ F   ++ ++A GMRHSLVLLKD   N VYGFGS +
Sbjct: 2   CGDGSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLKD---NSVYGFGSAR 58

Query: 210 RGQLGVSKDRI-RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
           RGQ+G    RI +S ++P++  G  + +IV I ANGD SAAL   GHLY WGR      D
Sbjct: 59  RGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWGRALIGQHD 118

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE------RVSSTRP 322
            + P  +  SLS SQ ALGW+H LVL+  GE+  LG   H     P       + S TR 
Sbjct: 119 DDQPSEILPSLSVSQVALGWHHALVLSA-GELYTLGVYRHQKCDLPGLGNVLGQQSDTRA 177

Query: 323 LSV---------ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
            S           LE V  LDG +V QIA+G EHSA+VT K                   
Sbjct: 178 TSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTDK------------------- 218

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
                    + TWGWGEHGQLGLG+T D + P+ VN+GD  Q       V+CGSGFT A+
Sbjct: 219 -------GTVFTWGWGEHGQLGLGDTSDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 271



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 102/259 (39%), Gaps = 38/259 (14%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
           G G+ GQLGTG       P  +   + + +  LA G  H L L   +SV G     +G  
Sbjct: 3   GDGSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLKDNSVYG-----FGSA 57

Query: 100 SSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
             GQ+G     +   Y  P          I +I A  +HS  + +SG L+  G    GQ 
Sbjct: 58  RRGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWGRALIGQ- 116

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL------------KDC----LGNQV 202
            H D      P ++    + +V Q+A G  H+LVL             + C    LGN V
Sbjct: 117 -HDD----DQPSEI--LPSLSVSQVALGWHHALVLSAGELYTLGVYRHQKCDLPGLGN-V 168

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-- 260
            G  S  R              L  V   L   ++  I++  + SA ++ +G ++TWG  
Sbjct: 169 LGQQSDTRATSSSHDCSSSLSVLETVPF-LDGEQVAQIASGTEHSALVTDKGTVFTWGWG 227

Query: 261 ----RGFNSTSDVNCPQSL 275
                G   TSD   PQ +
Sbjct: 228 EHGQLGLGDTSDHVAPQRV 246



 Score = 45.1 bits (105), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
           + V F DG +  +  I++G  HS  V+D G +FT G G  GQLG GD   H +P +V+
Sbjct: 192 ETVPFLDGEQ--VAQIASGTEHSALVTDKGTVFTWGWGEHGQLGLGDTSDHVAPQRVN 247


>gi|242058889|ref|XP_002458590.1| hypothetical protein SORBIDRAFT_03g036280 [Sorghum bicolor]
 gi|241930565|gb|EES03710.1| hypothetical protein SORBIDRAFT_03g036280 [Sorghum bicolor]
          Length = 306

 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/279 (41%), Positives = 154/279 (55%), Gaps = 36/279 (12%)

Query: 23  KIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQ--LLNLSSLSSVSMLACGGAHVL 80
           +  E E+E      WSWGAGTDGQLG G   D   PQ  LL       VS +A GGAH +
Sbjct: 10  RWREPEDEAAADWAWSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRGRVSFVAGGGAHAI 69

Query: 81  ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
           ALTS      G+VF+WGRG+ GQLGHG + +  +PK V F + H  TIT +SAGWNHSGF
Sbjct: 70  ALTSD-----GEVFTWGRGTHGQLGHGNLDNIPHPKLVKFLENH--TITCVSAGWNHSGF 122

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            +DSG LF CGDG+FGQLG GD  S + P +V+ F  + + ++A GMRHSLVLLK     
Sbjct: 123 ATDSGQLFMCGDGSFGQLGTGDNLSRNFPFEVAYFNGRYIEKLAFGMRHSLVLLK---AG 179

Query: 201 QVYGFGSGKR--------GQLGVSKDRIRSVSLPQV---------TIGLHDIE-IVGISA 242
           ++Y  G  +         G + V +   R+ S             T+   D E +V I++
Sbjct: 180 ELYTLGVYRHQKCDLPGSGNVLVQQSNTRATSSSHDRSSSLSMLETVPFIDGEHVVQIAS 239

Query: 243 NGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSL 275
             + SA ++ +G ++TWG       G   TSD   PQ +
Sbjct: 240 GTEHSALVTDKGSVFTWGWGEHGQLGLGDTSDHVAPQRV 278



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 146/313 (46%), Gaps = 58/313 (18%)

Query: 148 FTCGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           ++ G GT GQLG+G +  H    P+ + +     V  +A G  H++ L  D    +V+ +
Sbjct: 24  WSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRGRVSFVAGGGAHAIALTSD---GEVFTW 80

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
           G G  GQLG     + ++  P++   L +  I  +SA  + S   +  G L+  G G F 
Sbjct: 81  GRGTHGQLG--HGNLDNIPHPKLVKFLENHTITCVSAGWNHSGFATDSGQLFMCGDGSFG 138

Query: 265 S--TSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE- 315
              T D N  ++ P  +++       + A G  H LVL   GE+  LG   H     P  
Sbjct: 139 QLGTGD-NLSRNFPFEVAYFNGRYIEKLAFGMRHSLVLLKAGELYTLGVYRHQKCDLPGS 197

Query: 316 -----RVSSTRPLSVA---------LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
                + S+TR  S +         LE V  +DG  V+QIA+G EHSA+VT K       
Sbjct: 198 GNVLVQQSNTRATSSSHDRSSSLSMLETVPFIDGEHVVQIASGTEHSALVTDK------- 250

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                               ++ TWGWGEHGQLGLG+T D + P+ V++GD  Q     L
Sbjct: 251 -------------------GSVFTWGWGEHGQLGLGDTSDHVAPQRVDIGDNGQRMSGSL 291

Query: 422 EVFCGSGFTYAIS 434
            V+CGSGFT A+ 
Sbjct: 292 AVYCGSGFTVAVK 304


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 182/383 (47%), Gaps = 52/383 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++SWG G DGQ G G  +D+  P  +      +V  +ACG  H + LT    V     +S
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDV-----WS 62

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG  G+LGH +      P  V+   G   +I  ++ G  H+  +SD+G L+T G G +
Sbjct: 63  WGRGDDGRLGHADNHWKYVPHLVSALTGK--SIKQVTCGSYHTAAISDTGALWTWGGGMY 120

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LGHG+   H +P +V +F+ + V QIACG RH+  LL    G +VY +G  + G  G+
Sbjct: 121 GKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLA---GGEVYCWGDRENGVCGI 177

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSD 268
             +      LP+    L  ++I  I+A G  +AA++ +G L++WG G        N  + 
Sbjct: 178 G-EAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQ 236

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           V   C + L   +   Q A G  H   +T DG+VL  GG  HG L   ++ + T P    
Sbjct: 237 VTPCCVEGL-QGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCL-- 293

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
              V  L+G  ++Q+  G  H+                            ++E+  + T+
Sbjct: 294 ---VKALEGAGIVQVTCGWSHTV--------------------------TLSEDGKVFTF 324

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN 409
           G G+HG+LG G       PK+V 
Sbjct: 325 GNGDHGKLGHGANAKSALPKLVE 347



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 7/158 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +WSWG G  G+LG G   ++++P  +       V  +ACGG H   +T       G V +
Sbjct: 217 LWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTED-----GDVLT 271

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G  GQLGHG+  +   P  V   +G    I  ++ GW+H+  +S+ G +FT G+G  
Sbjct: 272 FGGGEHGQLGHGDKTNRTVPCLVKALEG--AGIVQVTCGWSHTVTLSEDGKVFTFGNGDH 329

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G+LGHG     + P  V S  N  V ++A    H++ L
Sbjct: 330 GKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367


>gi|414880247|tpg|DAA57378.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 227

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/250 (42%), Positives = 131/250 (52%), Gaps = 43/250 (17%)

Query: 200 NQVYGFGSGKRGQLGVSKDRI-RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
           N VYGFGS +RGQ+G    RI +S ++P++  G  + +IV I ANGD SAAL   GHLY 
Sbjct: 2   NSVYGFGSARRGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYV 61

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE--- 315
           WGR      D + P  +  SLS SQ ALGW+H LVL+  GE+  LG   H     P    
Sbjct: 62  WGRALIGQHDDDQPSEILPSLSVSQVALGWHHALVLSA-GELYTLGVYRHQKCDLPGLGN 120

Query: 316 ---RVSSTRPLSV---------ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
              + S TR  S           LE V  LDG +V QIA+G EHSA+VT K         
Sbjct: 121 VLGQQSDTRATSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTDK--------- 171

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 423
                              + TWGWGEHGQLGLG+T D + P+ VN+GD  Q       V
Sbjct: 172 -----------------GTVFTWGWGEHGQLGLGDTSDHVAPQRVNVGDNGQGMSGSFAV 214

Query: 424 FCGSGFTYAI 433
           +CGSGFT A+
Sbjct: 215 YCGSGFTVAV 224



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
           + V F DG +  +  I++G  HS  V+D G +FT G G  GQLG GD   H +P +V+
Sbjct: 145 ETVPFLDGEQ--VAQIASGTEHSALVTDKGTVFTWGWGEHGQLGLGDTSDHVAPQRVN 200


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 184/389 (47%), Gaps = 54/389 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + V+SWG G DGQLG G   D+  P  ++  +   +  +ACG  H + LT       G+V
Sbjct: 1   MTVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEE-----GEV 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG  G+LGHG+      P+ V    G    I  ++ G  H+  V+ SG L+T G G
Sbjct: 56  YTWGRGDDGRLGHGDNGWKFVPRLVEELRGK--NIRQVTCGSYHTAAVTVSGDLYTWGGG 113

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LGHG+   HS+P  V +  +  V Q+ACG RH++VLL++     VY +G  + G  
Sbjct: 114 MYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLEN---KDVYTWGDKENGVS 170

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDV 269
           G   D      LP     L    IV ISA G  +AALS  G ++T+G G        S+ 
Sbjct: 171 G-HGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229

Query: 270 NCPQS-LPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           N P +    +L+     Q A G  H   +T  GEV   GG  HG L   ++V+ T P  V
Sbjct: 230 NQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289

Query: 326 A--LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
              LEK+       V+QI  G  H+  +T                          +   +
Sbjct: 290 ESLLEKL-------VLQITCGWSHTVTLT--------------------------DTGEV 316

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
            TWG G+HG+LG  +T     PK V++ D
Sbjct: 317 YTWGNGDHGKLGHNDTAKVTLPKPVDVLD 345



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 160/342 (46%), Gaps = 32/342 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G DG+LG G    +  P+L+      ++  + CG  H  A+T     + G ++
Sbjct: 54  EVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVT-----VSGDLY 108

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  G+LGHG       P  V      +  +  ++ G  H+  + ++  ++T GD  
Sbjct: 109 TWGGGMYGKLGHGNETGHSTPYLVETLKSMQ--VRQVACGSRHTVVLLENKDVYTWGDKE 166

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  GHGD   H   P  V     K++ QI ACG  H+  L +     +V+ FG GK G+
Sbjct: 167 NGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGF-HTAALSE---FGEVFTFGEGKFGR 222

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
           LG + +R + V+  +    L    +  ++  G  +AA++  G +YTWG       G    
Sbjct: 223 LGHNSERNQPVA--RFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK 280

Query: 267 SDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRP 322
            +   P  + S L     Q   GW+H + LT  GEV   G   HG L  +D  +V+  +P
Sbjct: 281 VNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKP 340

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
           + V       LDG +VI +A+  EH+  +      +R  +++
Sbjct: 341 VDV-------LDGKRVISVASYNEHTVALVDPVAMLRASMLT 375


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 182/385 (47%), Gaps = 50/385 (12%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + V+SWG G DGQLG G   D+  P  ++  +   +  +ACG  H + LT       G+V
Sbjct: 1   MTVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDE-----GEV 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG  G+LGHG+      P+ V    G    I  ++ G  H+  V+ SG L+T G G
Sbjct: 56  YTWGRGDDGRLGHGDNGWKFVPRLVEELRGK--NIRQVTCGSYHTAAVTVSGDLYTWGGG 113

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LGHG+   HS+P  V +     V Q+ACG RH++VLL++     VY +G  + G  
Sbjct: 114 MYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLEN---KDVYTWGDKENGVS 170

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDV 269
           G   D      LP     L    IV ISA G  +AALS  G ++T+G G        S+ 
Sbjct: 171 G-HGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229

Query: 270 NCPQS-LPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           N P +    +L+     Q A G  H   +T  GEV   GG  HG L   ++V+ T P   
Sbjct: 230 NQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPT-- 287

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +V +L    V+QI  G  H+  +T                          +   + T
Sbjct: 288 ---RVESLVEKLVVQITCGWSHTVALT--------------------------DTGEVYT 318

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNL 410
           WG G+HG+LG  +T     PK+V++
Sbjct: 319 WGNGDHGKLGHNDTTKVTLPKLVDV 343



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 157/340 (46%), Gaps = 28/340 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G DG+LG G    +  P+L+      ++  + CG  H  A+T     + G ++
Sbjct: 54  EVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVT-----VSGDLY 108

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  G+LGHG       P  V    G +  +  ++ G  H+  + ++  ++T GD  
Sbjct: 109 TWGGGMYGKLGHGNETGHSTPFLVETLKGMQ--VRQVACGSRHTVVLLENKDVYTWGDKE 166

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  GHGD   H   P  V     KN+ QI ACG  H+  L +     +V+ FG GK G+
Sbjct: 167 NGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGF-HTAALSE---FGEVFTFGEGKFGR 222

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
           LG + +R + V+  +    L    +  ++  G  +AA++  G +YTWG       G    
Sbjct: 223 LGHNSERNQPVA--RFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK 280

Query: 267 SDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +   P  + S +     Q   GW+H + LT  GEV   G   HG L   +    T P  
Sbjct: 281 VNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLP-- 338

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
              + V  L+G +VI +A+  EH+  +      +R  +++
Sbjct: 339 ---KLVDVLEGKRVISVASYNEHTVALVDPVAMLRASMLT 375


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 175/383 (45%), Gaps = 50/383 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + V++WG G DGQLG G   D+  P L+          ++CG  H + LT       GKV
Sbjct: 1   MTVYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDD-----GKV 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG  G+LGHG+      P+ V   D     +  ++ G  H+  V+ SG L+T G G
Sbjct: 56  YTWGRGDDGRLGHGDNGWKFVPRLVE--DLRDKKVRQVTCGSYHTAAVTVSGELYTWGGG 113

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LGHG+   HS+P  V S     V Q+ACG RH++VLL++     VY +G  + G  
Sbjct: 114 MYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLEN---QDVYTWGDKENGVS 170

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTS 267
           G         S P     L +I I  ISA G  +AALS  G ++T+G G       NS  
Sbjct: 171 GHGDTSGHQYS-PYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSER 229

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           +    + + + +     Q A G  H   +T  G V   GG  HG L   ++V+   P   
Sbjct: 230 NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPT-- 287

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +V +L    +IQ+  G  H+  +T K                            + T
Sbjct: 288 ---RVESLIDKNIIQLTCGWSHTVALTDK--------------------------GEVFT 318

Query: 386 WGWGEHGQLGLGNTCDQIHPKVV 408
           WG G+HG+LG  +T     PK++
Sbjct: 319 WGNGDHGKLGHNDTNKVTEPKLI 341



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 156/329 (47%), Gaps = 32/329 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV++WG G DG+LG G    +  P+L+       V  + CG  H  A+T     + G+++
Sbjct: 54  KVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVT-----VSGELY 108

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  G+LGHG       P  V    G    +  ++ G  H+  + ++  ++T GD  
Sbjct: 109 TWGGGMYGKLGHGNENGHSTPSLVESIKG--LYVRQVACGSRHTVVLLENQDVYTWGDKE 166

Query: 155 FGQLGHGDYRSHS-SPVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  GHGD   H  SP  VS  V  N+ QI ACG  H+  L ++    QV+ FG GK G+
Sbjct: 167 NGVSGHGDTSGHQYSPYCVSELVEINIKQISACGF-HTAALSEN---GQVFTFGEGKFGR 222

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD 268
           LG + +R + V+  +    L    I  ++  G  +AA++  GH++TWG G          
Sbjct: 223 LGHNSERNQPVA--KCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDK 280

Query: 269 VNCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           VN  Q +P+ +      +  Q   GW+H + LT  GEV   G   HG L   +    T P
Sbjct: 281 VN--QIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEP 338

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
                + +   +  +VI +A+  EH+  +
Sbjct: 339 -----KLIETFNSKRVISVASYNEHTVAL 362



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 155/353 (43%), Gaps = 55/353 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WGRG  GQLG G+  D  +P  V      R T+  IS G  H+  ++D G ++T G 
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQD-RQTV-QISCGSGHTVVLTDDGKVYTWGR 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  V    +K V Q+ CG  H+  +    +  ++Y +G G  G+
Sbjct: 61  GDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAV---TVSGELYTWGGGMYGK 117

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS---DV 269
           LG   +   S   P +   +  + +  ++     +  L     +YTWG   N  S   D 
Sbjct: 118 LGHGNENGHST--PSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDT 175

Query: 270 NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVSSTRP 322
           +  Q  P  +S        Q +    H   L+ +G+V   G    G L  + ER    +P
Sbjct: 176 SGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSER---NQP 232

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           ++  ++    L G ++ Q+A G  H+A VT   H                          
Sbjct: 233 VAKCIDA---LIGKRIKQVACGGFHTAAVTESGH-------------------------- 263

Query: 383 IMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           + TWG GEHGQLG G+  +QI P +V +L D+       +++ CG   T A++
Sbjct: 264 VFTWGGGEHGQLGHGDKVNQIIPTRVESLIDK-----NIIQLTCGWSHTVALT 311



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 9/161 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+++G G  G+LG     ++   + ++      +  +ACGG H  A+T       G VF
Sbjct: 211 QVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTES-----GHVF 265

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG G  GQLGHG+ V+ + P  V +  D +   I  ++ GW+H+  ++D G +FT G+G
Sbjct: 266 TWGGGEHGQLGHGDKVNQIIPTRVESLIDKN---IIQLTCGWSHTVALTDKGEVFTWGNG 322

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
             G+LGH D    + P  + +F +K V  +A    H++ L+
Sbjct: 323 DHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALV 363


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 175/384 (45%), Gaps = 54/384 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG G DGQLG G   D+  P  ++      V  +ACG  H + LT+      G+VF+
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTD-----GEVFT 56

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG  G+LGHG+      P+      G    +  ++ G  H+  V+ +G L+T G G +
Sbjct: 57  WGRGDDGRLGHGDNGWKYVPRMTQSLAGQ--IVLQVTCGSYHTAAVTGNGDLYTWGGGMY 114

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LGHGD   H++P +V + V   V QIACG RH+ ++        +Y +G  + G  G 
Sbjct: 115 GKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTAS---GALYTWGDKENGVAGH 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNC 271
            +       LP++   +    +  ISA G  +A ++  G L+TWG G        S+ NC
Sbjct: 172 GETEGHQY-LPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNC 230

Query: 272 PQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
               P+ + +       Q + G  H  V++ DG +   GG  HG L   +RV+   P  V
Sbjct: 231 HS--PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFV 288

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
                  LDG+ V QI  G  HS  +T K                            + T
Sbjct: 289 -----EALDGMFVSQITCGWSHSVALTVK--------------------------GLVYT 317

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVN 409
           WG G+HG+LG GN      P+ V 
Sbjct: 318 WGNGDHGKLGHGNGRKVAVPQAVE 341



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 25/288 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G DG+LG G    +  P++    +   V  + CG  H  A+T       G ++
Sbjct: 53  EVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGN-----GDLY 107

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  G+LGHG+      PK V    G   T+  I+ G  H+  V+ SG L+T GD  
Sbjct: 108 TWGGGMYGKLGHGDEAGHATPKRVEALVG--ATVAQIACGSRHTAIVTASGALYTWGDKE 165

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  GHG+   H   P  + S   K V QI ACG   ++V        +++ +G GK G+
Sbjct: 166 NGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDA----GELFTWGEGKFGR 221

Query: 213 LG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNS 265
           LG +S+    S ++    +G    +   +S  G  +A +S +G LYT+G       G N 
Sbjct: 222 LGHMSERNCHSPTIVDYMVGKKPRQ---VSCGGFHTAVVSEDGRLYTFGGGEHGQLGHND 278

Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
             +   P  + +   +  SQ   GW+H + LT  G V   G   HG L
Sbjct: 279 RVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKL 326



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 43/300 (14%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +FT G G  GQLG GD      P  V +     V QIACG  H++VL  D    +V+ +G
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTD---GEVFTWG 58

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--- 263
            G  G+LG   +  + V  P++T  L    ++ ++     +AA++  G LYTWG G    
Sbjct: 59  RGDDGRLGHGDNGWKYV--PRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGK 116

Query: 264 ---NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
                 +    P+ + +    + +Q A G  H  ++T  G +   G   +G+    E   
Sbjct: 117 LGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGE-TE 175

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRL---------- 360
             + L   LE ++     +V QI+A   H+A+VT        G+  + RL          
Sbjct: 176 GHQYLPRLLESMAAK---RVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHS 232

Query: 361 -FIISYTPFFPP-------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
             I+ Y     P       F   V++E+  + T+G GEHGQLG  +  +++ P  V   D
Sbjct: 233 PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALD 292



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 7/138 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG     +  SP +++         ++CGG H   ++       G+++
Sbjct: 210 ELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSED-----GRLY 264

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G G  GQLGH + V+ + P  V   DG    ++ I+ GW+HS  ++  G ++T G+G 
Sbjct: 265 TFGGGEHGQLGHNDRVNKMTPTFVEALDG--MFVSQITCGWSHSVALTVKGLVYTWGNGD 322

Query: 155 FGQLGHGDYRSHSSPVKV 172
            G+LGHG+ R  + P  V
Sbjct: 323 HGKLGHGNGRKVAVPQAV 340



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           A+ TWG GE GQLGLG+T DQ  P  V   D  +    Q ++ CGSG T  ++
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQDEPTYV---DALRGVGVQ-QIACGSGHTVVLT 49


>gi|297597721|ref|NP_001044425.2| Os01g0777800 [Oryza sativa Japonica Group]
 gi|255673744|dbj|BAF06339.2| Os01g0777800 [Oryza sativa Japonica Group]
          Length = 180

 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/164 (56%), Positives = 111/164 (67%), Gaps = 9/164 (5%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
           V  WSWGAGTDGQLG G   D   PQ L L       VS +A GGAH +ALTS      G
Sbjct: 15  VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 69

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +VF+WGRG+ GQLGHG++ +  +PK V FF+   Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 70  EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 127

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           DG+FGQLG GD    + P +V+ F  K+V ++A GMRHSLVLLK
Sbjct: 128 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLK 171



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 240 ISANGDRSAALSAEGHLYTWGRGFNST---SDV-NCPQSLPSSLSFSQAAL------GWN 289
           ++  G  + AL+++G ++TWGRG +      DV N P   P  + F +  +      GWN
Sbjct: 55  VAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPH--PKLVKFFENYMITCVSAGWN 112

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H    T  G++ M G    G L   +      P  VA     +     V+++A G  HS 
Sbjct: 113 HSGFATDSGQLFMCGDGSFGQLGAGDNHPRNLPFEVAYFTTKH-----VVRLALGMRHSL 167

Query: 350 VV 351
           V+
Sbjct: 168 VL 169


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 163/324 (50%), Gaps = 26/324 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
            KV++ G G+ G+LG G   +   P  ++  S+  V  +A  C G HVLA+T+      GK
Sbjct: 2978 KVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTA-----DGK 3032

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  GQLGHG +     PK +  F      I  +S G  HS  VS +G LFT G 
Sbjct: 3033 VFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKH--IREVSCGTGHSAAVSVNGELFTWGQ 3090

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  G+LGHGD  + + P  V +     +  +ACG R++  L      N ++ +G G  G+
Sbjct: 3091 GADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAG--DNSLWAWGDGSFGK 3148

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--FNSTSDVN 270
            LG+ KD   S  +P V +      I+ I      S  L+ EG +YTWG+G  +   +D  
Sbjct: 3149 LGL-KDGSSSTDVP-VQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDST 3206

Query: 271  CPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
              Q +P+      S + +Q A+G  H L LT  GEV   G + HG   +   + + +P  
Sbjct: 3207 SVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKP-- 3264

Query: 325  VALEKVSNLDGVKVIQIAAGAEHS 348
               + V++L G ++ +IA G+ HS
Sbjct: 3265 ---QIVASLKGHRICKIACGSSHS 3285



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 15/270 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV+SWG G++G LG G    + +P  +   S   +  ++ G  H  A+T       G ++
Sbjct: 528 KVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTE-----DGVLY 582

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+GS G+LGHG   D L P  V   +G +       +G  H+  + D+G +++ GDG 
Sbjct: 583 TWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGD 642

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +G+LG      +  P  +S   + + V +I CG + S+ L KD    ++Y +G G   QL
Sbjct: 643 YGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKD---GKLYSWGCGDTYQL 699

Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           G  +++ +R    P++  GL +  +  +S       AL+ +  +Y WG+  NS+ +VN  
Sbjct: 700 GHGNQEHVRQ---PKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGK--NSSFEVNES 754

Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
             + SS    +AA G   +L+  G  E  +
Sbjct: 755 GDIISSPLMIEAASGKGALLIACGASETFV 784



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 110/237 (46%), Gaps = 17/237 (7%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
           G H+LALT       GKV+SWG+GS+G LG G       P  V    G R  I HISAG 
Sbjct: 517 GNHILALTK-----DGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDR--IVHISAGS 569

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            HS  V++ G L+T G G++G+LGHG+      P  V       + Q+ CG   +  L  
Sbjct: 570 MHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLAL 629

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D  G QV+ +G G  G+LG        V  P   IG     +V I      S AL+ +G 
Sbjct: 630 DDTG-QVWSWGDGDYGKLGRPGSDQNKVPKPISGIG-STSPVVKIICGNQISMALTKDGK 687

Query: 256 LYTWG------RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
           LY+WG       G  +   V  P+ +   S    S  ++G  H + LT D +V   G
Sbjct: 688 LYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 17/248 (6%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            ++++WG G DG+LG G   +   P L+       V    CG +H   +T       G ++
Sbjct: 3943 ELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITD-----DGSLY 3997

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +      PK V+   G + T     +G   +   + SGC+F+ GDG 
Sbjct: 3998 TWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGD 4057

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S   K+V ++ CG + S+ L        VY +G G   +LG
Sbjct: 4058 YGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMAL---TTAGHVYTWGKGDYYRLG 4114

Query: 215  VSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
               D  +    P+  +GL   E ++ I          +  G +++WG       G ++T 
Sbjct: 4115 HGDDSHQRT--PRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQ 4172

Query: 268  DVNCPQSL 275
             V+ P+ +
Sbjct: 4173 AVSVPKRI 4180



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 164/422 (38%), Gaps = 78/422 (18%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+ WG    GQLG    +   SP+L    S  + +M+  G   + A+T       GKV++
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTD-----DGKVYA 3890

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLFTCGDG 153
             G  + G+LG G   +   P P+T        +  I+  +G  H   V+  G L+  G+G
Sbjct: 3891 SGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEG 3950

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LG G   + + P  + S  +K+V    CG  HS  +  D     +Y +G G+ G+L
Sbjct: 3951 EDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDD---GSLYTWGKGRYGRL 4007

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTW--------GRGF 263
            G +    +    P++   L   ++  ++  +GD ++   +A G +++W        GRG 
Sbjct: 4008 GHNDHETQHK--PKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGG 4065

Query: 264  NSTSDVNCPQSLPSSL-----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            N  S V  P+ + S              FS A     HV    G G+   LG        
Sbjct: 4066 NEGSKV--PKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTW-GKGDYYRLGHGDDSHQR 4122

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             P RV            +  L    VI I  G+ H  V T                    
Sbjct: 4123 TPRRV------------LGLLAHENVIDIGCGSLHCIVCT-------------------- 4150

Query: 373  FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                  E+  + +WG  + GQ+G   T     PK +N+ D          V CGS  + A
Sbjct: 4151 ------ESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNI----CIDHVACGSAHSIA 4200

Query: 433  IS 434
             S
Sbjct: 4201 WS 4202



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 54/218 (24%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG--GAHVLA----------- 81
            ++++WG G DG+LG G  +++  P+L+       +S +ACG   AH LA           
Sbjct: 3084 ELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGD 3143

Query: 82   ---------------------LTSPSSVIG--------------GKVFSWGRGSSGQLGH 106
                                 +T PS++I               GKV++WG+G   +LG+
Sbjct: 3144 GSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGN 3203

Query: 107  GEMVDALYPKPV-TFFDG-HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
                D+   +P+ T  DG    TIT ++ G  H   ++ SG +++ GD   GQ G+    
Sbjct: 3204 ----DSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTI 3259

Query: 165  SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
             +  P  V+S     + +IACG  HS+   +  L   V
Sbjct: 3260 CNRKPQIVASLKGHRICKIACGSSHSIAFAQGSLTTAV 3297



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 35/146 (23%)

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           NH+L LT DG+V   G   +G+L      S T P +VA      L G +++ I+AG+ HS
Sbjct: 518 NHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAA-----LSGDRIVHISAGSMHS 572

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A VT                          E+  + TWG G +G+LG GN  D++ P +V
Sbjct: 573 AAVT--------------------------EDGVLYTWGKGSYGRLGHGNAEDKLIPTIV 606

Query: 409 NLGDEFQNRDTQLEVFCGSGFTYAIS 434
               E  N    ++V CGSG  + ++
Sbjct: 607 ----EGLNGVKIVQVDCGSGDAHTLA 628



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 14/149 (9%)

Query: 120 FFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
           FF G      I H  +G NH   ++  G +++ G G+ G LG G+  S ++P  V++   
Sbjct: 501 FFPGDEEIIQIDHNPSG-NHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSG 559

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDI 235
             +  I+ G  HS  + +D +   +Y +G G  G+L  G ++D++    +P +  GL+ +
Sbjct: 560 DRIVHISAGSMHSAAVTEDGV---LYTWGKGSYGRLGHGNAEDKL----IPTIVEGLNGV 612

Query: 236 EIVGISA-NGD-RSAALSAEGHLYTWGRG 262
           +IV +   +GD  + AL   G +++WG G
Sbjct: 613 KIVQVDCGSGDAHTLALDDTGQVWSWGDG 641



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 49/235 (20%)

Query: 188  RHSLVLLK-DCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
            R  L LL  D  GN+V+ +G     QLG  +S+ +++S    +    LH I+  G S   
Sbjct: 2911 RRRLDLLSTDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKC- 2969

Query: 245  DRSAALSAEGHLYTWGRGFNST------SDVNCPQSLPSSLSFS-----QAALGWNHVLV 293
              S  +S +G ++  G G +        +++  P  + SSLS         +    HVL 
Sbjct: 2970 --SFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQI-SSLSMYVVRKVAVSCAGRHVLA 3026

Query: 294  LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            +T DG+V   G   +G L      S  RP  + + +  ++      +++ G  HSA V+ 
Sbjct: 3027 VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIR-----EVSCGTGHSAAVS- 3080

Query: 354  KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                      N  + TWG G  G+LG G++ +Q  PK+V
Sbjct: 3081 -------------------------VNGELFTWGQGADGRLGHGDSNNQTKPKLV 3110


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 166/332 (50%), Gaps = 31/332 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K ++ G G++G+LG G   +  SP  +   S   V  +A   GG H LALT+      G+
Sbjct: 2751 KAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTA-----DGR 2805

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG++     P+ +   +G R  +  ++AG NHS  V+ SG L+T G 
Sbjct: 2806 VFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFR--VRDVAAGSNHSAAVTSSGELYTWGL 2863

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +  +P +V S V + V Q++CG R   +L L++   G  VY +G G  
Sbjct: 2864 GEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVE---GGLVYSWGDGDF 2920

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +      S P +   L  + +  +      S AL+  GH+YTWG+      G  
Sbjct: 2921 GKLG--RGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHG 2978

Query: 265  STSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            S   V  P +L   L   +    ++G  H L +T  G+V   G + HG   +     + R
Sbjct: 2979 SDQHVRWP-TLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRR 3037

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            P       V  +DG+K+ ++A G+ HS   T 
Sbjct: 3038 P-----TLVQGIDGIKITRVACGSSHSVAWTA 3064



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 126/286 (44%), Gaps = 29/286 (10%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG G  G+LGHG  +    P+ +    G    +  ++ G
Sbjct: 3709 GGKHCLALSSE-----GEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGK--DVVDVACG 3761

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL- 193
              HS  ++  G L+T G G +G+LGHGD      P  V + +   V  +ACG   +    
Sbjct: 3762 GAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCA 3821

Query: 194  LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
            + D  G  V+ +G G  G+LG  +       +P     L  + I+ +      S ALS  
Sbjct: 3822 ITDEEGGTVWSWGDGDYGKLG--RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNN 3879

Query: 254  GHLYTWGR------GFNSTSDVNCPQSL-----PSSLSFSQAALGWNHVLVLTGDGEVLM 302
            G +YTWG+      G      V  P+ +        +S S  AL   H +V T  GEV  
Sbjct: 3880 GSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGAL---HCVVCTDQGEVYT 3936

Query: 303  LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             G +  G L D       +P  VA      L   K+ +++ G+ H+
Sbjct: 3937 WGDNDEGQLGDGTTTGIQKPRLVA-----ALQNKKINRVSCGSAHT 3977



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 11/193 (5%)

Query: 36   VWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VWSWG G  G+LG G     ++  ++ +LS L  + +  CG    +AL++      G V+
Sbjct: 3830 VWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKV-ECGSQFSVALSN-----NGSVY 3883

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G   +LGHG       PK V    G +  +  IS G  H    +D G ++T GD  
Sbjct: 3884 TWGKGDYHRLGHGVDEHVRRPKKVMTLQGKK--VISISTGALHCVVCTDQGEVYTWGDND 3941

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK-RGQL 213
             GQLG G       P  V++  NK +++++CG  H+ V    C G      GS +    +
Sbjct: 3942 EGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHT-VAWSTCKGCSTPVAGSSRLPTSI 4000

Query: 214  GVSKDRIRSVSLP 226
             +  D ++ + +P
Sbjct: 4001 PLQYDLLKDIPIP 4013



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 154/412 (37%), Gaps = 102/412 (24%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYP---------KPV-------TFF----DGHR 125
            ++V GG+++ WG    GQLG  E      P         +P+       T F    DG  
Sbjct: 3609 TAVGGGQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRV 3668

Query: 126  YTITH--------------------------------ISAGWNHSGFVSDSGCLFTCGDG 153
            Y   +                                +++G  H   +S  G +++ G+G
Sbjct: 3669 YATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEG 3728

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHG+      P  + S   K+V  +ACG  HS  +    LG ++Y +G G+ G+L
Sbjct: 3729 EDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAI--TALG-ELYTWGKGRYGRL 3785

Query: 214  --GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTW--------GRG 262
              G S D+++   L +  +G   +++   S +    A    E G +++W        GRG
Sbjct: 3786 GHGDSDDQLKP-KLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRG 3844

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +    +       S L   +   G    + L+ +G V   G   +  L         RP
Sbjct: 3845 GSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRP 3904

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                 +KV  L G KVI I+ GA H  V T                          +   
Sbjct: 3905 -----KKVMTLQGKKVISISTGALHCVVCT--------------------------DQGE 3933

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            + TWG  + GQLG G T     P++V      QN+     V CGS  T A S
Sbjct: 3934 VYTWGDNDEGQLGDGTTTGIQKPRLVA---ALQNKKIN-RVSCGSAHTVAWS 3981



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 53/226 (23%)

Query: 199  GNQVYGFGSGKRGQLGVSKDRIRSVSLPQV---TIGLHDIEIVGISANGDRSAALSAE-G 254
              +VY +G   + QLG  K     + +PQ    T+ L  I + G    G +S  L  + G
Sbjct: 2697 AKRVYVWGLNDKEQLGGPKGS--KIKVPQAVDWTVSLQPISVAG----GSKSLFLVTQSG 2750

Query: 255  HLYTWGRGFNS------TSDVNCPQSLPSSLS---FSQAAL--GWNHVLVLTGDGEVLML 303
              Y  G G N       + +VN P  + ++LS     + A+  G  H L LT DG V   
Sbjct: 2751 KAYACGEGSNGRLGLGHSRNVNSPHQI-TALSQHVVRKVAVHSGGRHALALTADGRVFSW 2809

Query: 304  GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
            G    G L   +  S   P       +  L+G +V  +AAG+ HSA VT           
Sbjct: 2810 GEGDDGKLGHGDVTSLDTP-----RCIEALNGFRVRDVAAGSNHSAAVTS---------- 2854

Query: 364  SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                            +  + TWG GE+G+LG G+   Q+ PK V 
Sbjct: 2855 ----------------SGELYTWGLGEYGRLGHGDNLTQLTPKRVE 2884



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 45/244 (18%)

Query: 201  QVYGFGSGKRGQLGVSKDRIRSVSLP-QVT-IGLHDIEIVGISANGDRSAALSAEGHLYT 258
            + Y  G G  G+LG+   R  +V+ P Q+T +  H +  V + + G  + AL+A+G +++
Sbjct: 2751 KAYACGEGSNGRLGLGHSR--NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFS 2808

Query: 259  WGRGFN------STSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGM 310
            WG G +        + ++ P+ + +   F     A G NH   +T  GE+   G   +G 
Sbjct: 2809 WGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868

Query: 311  LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
            L   + ++   P     ++V +L G +V+Q++ G+  +  +                   
Sbjct: 2869 LGHGDNLTQLTP-----KRVESLVGQRVVQVSCGSRDAQTLA------------------ 2905

Query: 371  PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
                  + E   + +WG G+ G+LG G +     P +V   D+         V CG+ F+
Sbjct: 2906 ------LVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLV---DKLSGLGV-CHVECGAQFS 2955

Query: 431  YAIS 434
             A++
Sbjct: 2956 VALT 2959


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 173/382 (45%), Gaps = 50/382 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D   P +L    +  V+ + CG  H +A +        +++S
Sbjct: 42  VCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM----QLYS 97

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P+P+    G +  I  I+ G +H   V+ +G + + G    
Sbjct: 98  WGWGDFGRLGHGNSSDVFNPQPIVALQGMK--IKQIACGDSHCLTVTFNGQVHSWGRNQN 155

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G+ +    P K+ +F    V  IA G  H+  + +   G  +YG+G G+ G LG+
Sbjct: 156 GQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE---GGDLYGWGWGRYGNLGL 212

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
           S    RSV  P+    +   ++V ++     S ++S+ G LYT+G       G     D 
Sbjct: 213 SDRDDRSV--PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDH 270

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P+ L +   +  SQ + GW H + +  DG++   G +  G +   + V    P+ V  
Sbjct: 271 LVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNF 330

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                 D  K++Q+A G  H+  +T                          EN+ I +WG
Sbjct: 331 P-----DEQKIVQVACGWRHTLALT--------------------------ENKNIFSWG 359

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G   D+  PK+++
Sbjct: 360 RGASGQLGHGEIIDRNTPKMID 381



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 153/338 (45%), Gaps = 26/338 (7%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           +++I  A   I   ++E Q+   +SWG G  G+LG G   D  +PQ +       +  +A
Sbjct: 76  TSVICGADHTIAYSDDEMQL---YSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA 132

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H L +T       G+V SWGR  +GQLG G   D+L P+ +  F+G    +  I+A
Sbjct: 133 CGDSHCLTVT-----FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEG--VCVKMIAA 185

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  +++ G L+  G G +G LG  D    S P KVSS   + +  +ACG RHS+ +
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV 245

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                   +Y +G  K GQLG      +   +P+    L D+ I  IS     + A++ +
Sbjct: 246 SSS---GALYTYGWSKYGQLG--HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 254 GHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           G LY WG       G     D   P   + P      Q A GW H L LT +  +   G 
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGR 360

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
              G L   E +    P  +      +LDG    Q+ +
Sbjct: 361 GASGQLGHGEIIDRNTPKMI---DALSLDGSACKQLES 395



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 170/402 (42%), Gaps = 60/402 (14%)

Query: 44  DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
           D Q       DE  P+    +   SV +++ G  H  AL S     G  V SWGRG  GQ
Sbjct: 2   DAQAKAEAAGDEAVPE----APEQSVILISAGANHSAALLS-----GQMVCSWGRGEDGQ 52

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGD 162
           LGHG+  D   P  +T FD  R  +T +  G +H+  +  D   L++ G G FG+LGHG+
Sbjct: 53  LGHGDSEDRPVPTVLTSFDVPR--VTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGN 110

Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                +P  + +     + QIACG  H L +       QV+ +G  + GQLG+  +  + 
Sbjct: 111 SSDVFNPQPIVALQGMKIKQIACGDSHCLTVT---FNGQVHSWGRNQNGQLGLGNN--QD 165

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLP 276
             LPQ       + +  I+A  + + A++  G LY WG       G +   D + P+ + 
Sbjct: 166 SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS 225

Query: 277 S--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
           S         A GW H + ++  G +   G S +G L   +      P      K+  L 
Sbjct: 226 SVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-----RKLEALK 280

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
            V + QI+ G  H+  V                          AE+  +  WGW + GQ+
Sbjct: 281 DVPISQISGGWRHTMAV--------------------------AEDGKLYGWGWNKFGQV 314

Query: 395 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G+ +  D   P  VN  DE       ++V CG   T A++ +
Sbjct: 315 GVEDNVDHCSPVEVNFPDE----QKIVQVACGWRHTLALTEN 352


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 173/382 (45%), Gaps = 50/382 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D   P +L    +  V+ + CG  H +A +        +++S
Sbjct: 42  VCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM----QLYS 97

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P+P+    G +  I  I+ G +H   V+ +G + + G    
Sbjct: 98  WGWGDFGRLGHGNSSDVFNPQPIVALQGMK--IKQIACGDSHCLTVTFNGQVHSWGRNQN 155

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G+ +    P K+ +F    V  IA G  H+  + +   G  +YG+G G+ G LG+
Sbjct: 156 GQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE---GGDLYGWGWGRYGNLGL 212

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
           S    RSV  P+    +   ++V ++     S ++S+ G LYT+G       G     D 
Sbjct: 213 SDRDDRSV--PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDH 270

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P+ L +   +  SQ + GW H + +  DG++   G +  G +   + V    P+ V  
Sbjct: 271 LVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNF 330

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                 D  K++Q+A G  H+  +T                          EN+ I +WG
Sbjct: 331 P-----DEQKIVQVACGWRHTLALT--------------------------ENKNIFSWG 359

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G   D+  PK+++
Sbjct: 360 RGASGQLGHGEIIDRNTPKMID 381



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 153/338 (45%), Gaps = 26/338 (7%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           +++I  A   I   ++E Q+   +SWG G  G+LG G   D  +PQ +       +  +A
Sbjct: 76  TSVICGADHTIAYSDDEMQL---YSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA 132

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H L +T       G+V SWGR  +GQLG G   D+L P+ +  F+G    +  I+A
Sbjct: 133 CGDSHCLTVT-----FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEG--VCVKMIAA 185

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  +++ G L+  G G +G LG  D    S P KVSS   + +  +ACG RHS+ +
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV 245

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                   +Y +G  K GQLG      +   +P+    L D+ I  IS     + A++ +
Sbjct: 246 SSS---GALYTYGWSKYGQLG--HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 254 GHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           G LY WG       G     D   P   + P      Q A GW H L LT +  +   G 
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGR 360

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
              G L   E +    P  +      +LDG    Q+ +
Sbjct: 361 GASGQLGHGEIIDRNTPKMI---DALSLDGSACKQLES 395



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 170/402 (42%), Gaps = 60/402 (14%)

Query: 44  DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
           D Q       DE  P+    +   SV +++ G  H  AL S     G  V SWGRG  GQ
Sbjct: 2   DAQAKAEAAGDEAVPE----APEQSVILISAGANHSAALLS-----GQMVCSWGRGEDGQ 52

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGD 162
           LGHG+  D   P  +T FD  R  +T +  G +H+  +  D   L++ G G FG+LGHG+
Sbjct: 53  LGHGDSEDRPVPTVLTSFDVPR--VTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGN 110

Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                +P  + +     + QIACG  H L +       QV+ +G  + GQLG+  +  + 
Sbjct: 111 SSDVFNPQPIVALQGMKIKQIACGDSHCLTVT---FNGQVHSWGRNQNGQLGLGNN--QD 165

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLP 276
             LPQ       + +  I+A  + + A++  G LY WG       G +   D + P+ + 
Sbjct: 166 SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS 225

Query: 277 S--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
           S         A GW H + ++  G +   G S +G L   +      P      K+  L 
Sbjct: 226 SVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-----RKLEALK 280

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
            V + QI+ G  H+  V                          AE+  +  WGW + GQ+
Sbjct: 281 DVPISQISGGWRHTMAV--------------------------AEDGKLYGWGWNKFGQV 314

Query: 395 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G+ +  D   P  VN  DE       ++V CG   T A++ +
Sbjct: 315 GVEDNVDHCSPVEVNFPDE----QKIVQVACGWRHTLALTEN 352


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 171/383 (44%), Gaps = 51/383 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV-SMLACGGAHVLALTSPSSVIGGKVF 94
           V SWG G DGQLG G   D   P LL+   +  + S++ CG  H  A +        +++
Sbjct: 41  VCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQM----QLY 96

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG G  G+LGHG   D  +P+P+    G +  I  I+ G +H   V+D+G + + G   
Sbjct: 97  SWGWGDFGRLGHGNSSDVFHPQPIEALQGIK--IKQIACGDSHCLAVTDAGQVHSWGRNQ 154

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G+      P K+ +F    V  IA G  H+  +L+D     +YG+G G+ G LG
Sbjct: 155 NGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILED---GDLYGWGWGQYGNLG 211

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
           +     R V  P+    +   ++V ++     +  +S+ G LYT+G       G     D
Sbjct: 212 LGDRNDRLV--PEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFED 269

Query: 269 VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              P  L +      SQ A GW H + + GDG++   G +  G +   + V    P+ V 
Sbjct: 270 HLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVI 329

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
                  D  KV Q+A G  H+  +T                          EN+ + +W
Sbjct: 330 FP-----DEQKVAQVACGWRHTLALT--------------------------ENKNVFSW 358

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN 409
           G G  GQLG G   D+  PK+++
Sbjct: 359 GRGTSGQLGHGEIIDRNTPKMID 381



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 144/323 (44%), Gaps = 25/323 (7%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++SWG G  G+LG G   D   PQ +       +  +ACG +H LA+T       G+V
Sbjct: 93  MQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTD-----AGQV 147

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            SWGR  +GQLG G   D+L P+ +  F+G    +  I+AG  H+  + + G L+  G G
Sbjct: 148 HSWGRNQNGQLGLGNTEDSLLPQKIHAFEG--VCVKMIAAGAEHTAAILEDGDLYGWGWG 205

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G LG GD      P KVSS   + +  +ACG RH++ +        +Y +G  K GQL
Sbjct: 206 QYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSS---GDLYTYGWSKYGQL 262

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTS 267
           G          +P     L D  I  I+     + A++ +G LY WG       G     
Sbjct: 263 G--HGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNV 320

Query: 268 DVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP--- 322
           D   P  +  P     +Q A GW H L LT +  V   G    G L   E +    P   
Sbjct: 321 DHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMI 380

Query: 323 --LSVALEKVSNLDGVKVIQIAA 343
             LS+      NL+  K + + A
Sbjct: 381 DALSLDGYACKNLESSKAVPMIA 403



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 155/377 (41%), Gaps = 53/377 (14%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           +V++++ G  H +AL S  +V      SWGRG  GQLGHG+  D   P  ++ FD     
Sbjct: 21  TVALVSAGANHSVALLSSKAVC-----SWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIA 75

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
              I    + + +  +   L++ G G FG+LGHG+      P  + +     + QIACG 
Sbjct: 76  SVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGD 135

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +       QV+ +G  + GQLG+         LPQ       + +  I+A  + +
Sbjct: 136 SHCLAVTD---AGQVHSWGRNQNGQLGLGN--TEDSLLPQKIHAFEGVCVKMIAAGAEHT 190

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
           AA+  +G LY WG       G    +D   P+ + S         A GW H + ++  G+
Sbjct: 191 AAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGD 250

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      K+  L    + QIA G  H+  V G      
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDRFISQIAGGWRHTMAVAG------ 299

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                               +  +  WGW + GQ+G+ +  D   P  V   DE +    
Sbjct: 300 --------------------DGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQK---- 335

Query: 420 QLEVFCGSGFTYAISRH 436
             +V CG   T A++ +
Sbjct: 336 VAQVACGWRHTLALTEN 352



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 107/249 (42%), Gaps = 46/249 (18%)

Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           +V     + V  ++ G  HS+ LL       V  +G G+ GQLG      R V  P +  
Sbjct: 13  EVPEAPEQTVALVSAGANHSVALLSS---KAVCSWGRGEDGQLGHGDAEDRPV--PTLLS 67

Query: 231 GLHDIEIVGISANG-DRSAALSAEG-HLYTWG------RGFNSTSDVNCPQSLPS--SLS 280
           G     I  +   G D + A S E   LY+WG       G  ++SDV  PQ + +   + 
Sbjct: 68  GFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIK 127

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
             Q A G +H L +T  G+V   G + +G L       S  P     +K+   +GV V  
Sbjct: 128 IKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLP-----QKIHAFEGVCVKM 182

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
           IAAGAEH+A                           I E+  +  WGWG++G LGLG+  
Sbjct: 183 IAAGAEHTAA--------------------------ILEDGDLYGWGWGQYGNLGLGDRN 216

Query: 401 DQIHPKVVN 409
           D++ P+ V+
Sbjct: 217 DRLVPEKVS 225


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 149/322 (46%), Gaps = 23/322 (7%)

Query: 12  GKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM 71
           G +++I  A       E+EQQV   +SWG G  G+LG G   D  +PQ +       +  
Sbjct: 77  GITSVICGADHTTAYSEDEQQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQ 133

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           +ACG +H LA+T     + G+V SWGR  +GQLG G   D+L P+ +  F+G    +  I
Sbjct: 134 IACGDSHCLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEG--VCVKMI 186

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           +AG  H+  V++ G L+  G G +G LG GD      P KVSS   + +  IACG RH++
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTI 246

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +        +Y +G  K GQLG          +P     L D  I  IS     + AL+
Sbjct: 247 TVSSS---GSLYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDSSISQISGGWRHTMALT 301

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLML 303
           ++G LY WG       G   T D   P  +  P     +Q A GW H L  T    V   
Sbjct: 302 SDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSW 361

Query: 304 GGSHHGMLSDPERVSSTRPLSV 325
           G    G L   E V   +P+ +
Sbjct: 362 GRGTSGQLGHGEIVDRNKPVMI 383



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 164/382 (42%), Gaps = 52/382 (13%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           SWG G DGQLG G   D L P +L+   ++   ++ + CG  H  A +        +V+S
Sbjct: 45  SWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQ----QVYS 100

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P+PV    G +  I  I+ G +H   V+ +G + + G    
Sbjct: 101 WGWGDFGRLGHGNSSDVFTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQN 158

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ SF    V  IA G  H+  + +D     +YG+G G+ G LG+
Sbjct: 159 GQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 215

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R V  P+    +   ++V I+     +  +S+ G LYT+G       G     D 
Sbjct: 216 GDRNDRLV--PEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDH 273

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +    S SQ + GW H + LT DG++   G +  G +   +      P+ V  
Sbjct: 274 LVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKF 333

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +       KV Q+A G  H+   T                          E + + +WG
Sbjct: 334 PEDQ-----KVAQVACGWRHTLAFT--------------------------EKKNVFSWG 362

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G   D+  P +++
Sbjct: 363 RGTSGQLGHGEIVDRNKPVMID 384



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 164/379 (43%), Gaps = 58/379 (15%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           +V +++ G +H +AL     + G  + SWGRG  GQLGHG+  D L P  ++ FD     
Sbjct: 23  AVVLVSAGASHSVAL-----LAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPG 77

Query: 128 ITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           IT +  G +H + +  D   +++ G G FG+LGHG+     +P  V +     + QIACG
Sbjct: 78  ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACG 137

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             H L +    +  +V  +G  + GQLG+  ++D +    LPQ       + +  I+A  
Sbjct: 138 DSHCLAV---TMAGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQSFEGVCVKMIAAGA 190

Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
           + +AA++ +G LY WG       G    +D   P+ + S         A GW H + ++ 
Sbjct: 191 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSS 250

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            G +   G S +G L   +      P      K+  L    + QI+ G  H+  +T    
Sbjct: 251 SGSLYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDSSISQISGGWRHTMALT---- 301

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                                  +  +  WGW + GQ+G+G+T D   P  V    +F  
Sbjct: 302 ----------------------SDGKLYGWGWNKFGQVGVGDTDDHCFPVQV----KFPE 335

Query: 417 RDTQLEVFCGSGFTYAISR 435
                +V CG   T A + 
Sbjct: 336 DQKVAQVACGWRHTLAFTE 354



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G    GQLG G   D L P  L     SS+S ++ G  H +ALTS      GK++ 
Sbjct: 254 LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSD-----GKLYG 308

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G+  D  +P  V F +  +  +  ++ GW H+   ++   +F+ G GT 
Sbjct: 309 WGWNKFGQVGVGDTDDHCFPVQVKFPEDQK--VAQVACGWRHTLAFTEKKNVFSWGRGTS 366

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLGHG+    + PV + + 
Sbjct: 367 GQLGHGEIVDRNKPVMIDAL 386


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 173/388 (44%), Gaps = 60/388 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG    GQLG G      +P  + L + ++++ LA GG+H LALT       G V 
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTD-----TGVVL 112

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S GQLG G   D   P  V    G   TIT ++AG  HS  ++D+G +   G  +
Sbjct: 113 AWGSNSRGQLGDGTTTDRSTPVTVGLPAG--TTITALAAGRRHSLALTDTGAVLAWGSNS 170

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
            GQLG G   + S+PV V       +  +A    +SL L           +GS  RGQL 
Sbjct: 171 NGQLGDGTTTARSTPVTVGLPAGTTITALAAST-YSLALTDT---GAALAWGSNSRGQLG 226

Query: 214 -GVSKDRIR--SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
            G + DR    +VSLP  T       I  ++A+ D S AL+  G +  WG   N      
Sbjct: 227 DGTTTDRSTPVTVSLPAGT------TITALAASYDHSLALTDTGAVLAWGSNSNGQLGDG 280

Query: 265 STSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           +T++ + P +  LP+  + +  A G +H LVLT  G VL  G + +G L D      + P
Sbjct: 281 TTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTP 340

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           ++V L       G  +  +AAG  HS  +T                          +  A
Sbjct: 341 VTVGLPA-----GTTITALAAGYYHSLALT--------------------------DTGA 369

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
           ++ WG   +GQLG G T D+  P  V L
Sbjct: 370 VLAWGGNSYGQLGDGTTTDRSTPVTVGL 397



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 7/161 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG+ ++GQLG G   +  +P  + L + ++++ LA G +H L LTS      G V 
Sbjct: 265 AVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTS-----AGAVL 319

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S+GQLG G   D   P  V    G   TIT ++AG+ HS  ++D+G +   G  +
Sbjct: 320 AWGSNSNGQLGDGTTTDRSTPVTVGLPAG--TTITALAAGYYHSLALTDTGAVLAWGGNS 377

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           +GQLG G     S+PV V       +  +     H + L+ 
Sbjct: 378 YGQLGDGTTTDRSTPVTVGLPAGTTITVLVSMDNHGMALVA 418


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 148/322 (45%), Gaps = 27/322 (8%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           +++I  A       EEEQQV   +SWG G  G+LG G   D  +PQ +       +  +A
Sbjct: 76  TSVICGADHTTAYSEEEQQV---YSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMA 132

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H LA+T     +GG+V SWGR  +GQLG G   D+L P+ +  F+G    +  I+A
Sbjct: 133 CGDSHCLAVT-----MGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEG--ICVKMIAA 185

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  V++ G L+  G G +G LG GD      P KVS    + +  IACG RH++ +
Sbjct: 186 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITV 245

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
               +   +Y +G  K GQLG           P     L D     IS     + AL+++
Sbjct: 246 SSSGI---LYTYGWSKYGQLG--HGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSD 300

Query: 254 GHLYTWGRGFNSTSDVNCPQSL----------PSSLSFSQAALGWNHVLVLTGDGEVLML 303
           G LY W  G+N    V    S+          P+    +Q A GW H L  T    V   
Sbjct: 301 GKLYGW--GWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAW 358

Query: 304 GGSHHGMLSDPERVSSTRPLSV 325
           G    G L   E V   +PL +
Sbjct: 359 GRGTSGQLGHGEIVDRNKPLMI 380



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 163/380 (42%), Gaps = 50/380 (13%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           SWG G DGQLG G   D L P +++      ++ + CG  H  A +        +V+SWG
Sbjct: 44  SWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQ----QVYSWG 99

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG   D   P+PV    G +  I  ++ G +H   V+  G + + G    GQ
Sbjct: 100 WGDFGRLGHGNSSDVFTPQPVRALQGIK--IKQMACGDSHCLAVTMGGEVQSWGRNQNGQ 157

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G       P K+ +F    V  IA G  H+  + +D     +YG+G G+ G LG+  
Sbjct: 158 LGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 214

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
              R V  P+    +   ++V I+     +  +S+ G LYT+G       G     D   
Sbjct: 215 RNDRFV--PEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLF 272

Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  + +    S SQ + GW H + LT DG++   G +  G +   + V    P+ V    
Sbjct: 273 PHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPA 332

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
                  KV Q+A G  H+              ++YT            E + +  WG G
Sbjct: 333 EQ-----KVAQVACGWRHT--------------LAYT------------EKKNVFAWGRG 361

Query: 390 EHGQLGLGNTCDQIHPKVVN 409
             GQLG G   D+  P +++
Sbjct: 362 TSGQLGHGEIVDRNKPLMID 381



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 161/378 (42%), Gaps = 60/378 (15%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL       G  + SWGRG  GQLGHG+  D L P  ++ FD  R  I
Sbjct: 23  VVLVSAGASHSVALLE-----GNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPR--I 75

Query: 129 THISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           T +  G +H + +  +   +++ G G FG+LGHG+     +P  V +     + Q+ACG 
Sbjct: 76  TSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGD 135

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H L +    +G +V  +G  + GQLG+  ++D +    LPQ       I +  I+A  +
Sbjct: 136 SHCLAV---TMGGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFEGICVKMIAAGAE 188

Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGD 297
            +AA++ +G LY WG       G    +D   P+  SL         A GW H + ++  
Sbjct: 189 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSS 248

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           G +   G S +G L   +      P      KV  L      QI+ G  H+  +T     
Sbjct: 249 GILYTYGWSKYGQLGHGDFEDHLFP-----HKVEALKDSSTSQISGGWRHTMALT----- 298

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                                 +  +  WGW + GQ+G G++ D   P  V     F   
Sbjct: 299 ---------------------SDGKLYGWGWNKFGQVGAGDSVDHCSPVQVM----FPAE 333

Query: 418 DTQLEVFCGSGFTYAISR 435
               +V CG   T A + 
Sbjct: 334 QKVAQVACGWRHTLAYTE 351



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 7/140 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G    GQLG G   D L P  +     SS S ++ G  H +ALTS      GK++ 
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSD-----GKLYG 305

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G+ VD   P  V F    +  +  ++ GW H+   ++   +F  G GT 
Sbjct: 306 WGWNKFGQVGAGDSVDHCSPVQVMFPAEQK--VAQVACGWRHTLAYTEKKNVFAWGRGTS 363

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLGHG+    + P+ + + 
Sbjct: 364 GQLGHGEIVDRNKPLMIDAI 383


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 164/349 (46%), Gaps = 26/349 (7%)

Query: 12  GKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM 71
           G +++I  A       E+E QV   +SWG G  G+LG G   D  +PQ +       +  
Sbjct: 67  GITSVICGADHTTAYSEDELQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQ 123

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           +ACG +H LA+T     + G+V SWGR  +GQLG G   D+L P+ +  F+G    +  I
Sbjct: 124 IACGDSHCLAVT-----MAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEG--VCVKMI 176

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           +AG  H+  V++ G L+  G G +G LG GD      P KVSS   + +  +ACG RH++
Sbjct: 177 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTI 236

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +     GN +Y +G  K GQLG          +P     L D  I  IS     + AL+
Sbjct: 237 TVSDS--GN-LYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDSTISQISGGWRHTMALT 291

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLML 303
           +EG LY WG       G  +  D   P  +  P     SQ A GW H L L+    V   
Sbjct: 292 SEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSW 351

Query: 304 GGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVV 351
           G    G L + E V    P+ + AL   ++  G K ++ +  A  +A V
Sbjct: 352 GRGTSGQLGNGEIVDRNTPVLIDALS--TDGSGCKKLESSTAAPFAAKV 398



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 164/382 (42%), Gaps = 54/382 (14%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           SWG G DGQLG G   D L P +L+      ++ + CG  H  A +        +V+SWG
Sbjct: 37  SWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDEL----QVYSWG 92

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG   D   P+PV    G +  I  I+ G +H   V+ +G + + G    GQ
Sbjct: 93  WGDFGRLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGQVQSWGRNQNGQ 150

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-- 215
           LG G       P K+ +F    V  IA G  H+  + +D     +YG+G G+ G LG+  
Sbjct: 151 LGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 207

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
             DR+    LP+    +   ++V ++     +  +S  G+LYT+G       G     D 
Sbjct: 208 RNDRL----LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 263

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +    + SQ + GW H + LT +G++   G +  G +          P+ V  
Sbjct: 264 LVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHF 323

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +       K+ Q+A G  H+                            ++E + + +WG
Sbjct: 324 PEDQ-----KISQVACGWRHTLA--------------------------LSEKKNVFSWG 352

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G   D+  P +++
Sbjct: 353 RGTSGQLGNGEIVDRNTPVLID 374



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 167/383 (43%), Gaps = 60/383 (15%)

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
           S   +V +++ G +H +AL     + G  + SWGRG  GQLGHG+  D L P  ++ FD 
Sbjct: 11  SPPQTVVLVSAGASHSVAL-----LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDA 65

Query: 124 HRYTITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
               IT +  G +H + +  D   +++ G G FG+LGHG+     +P  V +     + Q
Sbjct: 66  P--GITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQ 123

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
           IACG  H L +    +  QV  +G  + GQLG+  ++D +    LPQ       + +  I
Sbjct: 124 IACGDSHCLAV---TMAGQVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFEGVCVKMI 176

Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
           +A  + +AA++ +G LY WG       G    +D   P+ + S         A GW H +
Sbjct: 177 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTI 236

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            ++  G +   G S +G L   +      P      K+  L    + QI+ G  H+  +T
Sbjct: 237 TVSDSGNLYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDSTISQISGGWRHTMALT 291

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                    +E + +  WGW + GQ+G+GN  D   P  V+   
Sbjct: 292 -------------------------SEGK-LYGWGWNKFGQVGVGNNDDHCSPVQVH--- 322

Query: 413 EFQNRDTQLEVFCGSGFTYAISR 435
            F       +V CG   T A+S 
Sbjct: 323 -FPEDQKISQVACGWRHTLALSE 344


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 170/381 (44%), Gaps = 50/381 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D L P  L+      +  +ACG  H LA +   +    +++S
Sbjct: 34  VCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRN----ELYS 89

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D L P+P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 90  WGWGDFGRLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 147

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ +F    +  +A G  HS+ + ++    ++YG+G G+ G LG+
Sbjct: 148 GQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 204

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R +  P+    +   ++V ++     + ++S+ G LYT+G       G  +  D 
Sbjct: 205 GDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDS 262

Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             PQ L   S    SQ + GW H + LT  G +   G +  G +   + V    P+ V  
Sbjct: 263 LVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF 322

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                    KV+QI+ G  H+  VT                          E   + +WG
Sbjct: 323 PHDQ-----KVVQISCGWRHTIAVT--------------------------EKENVFSWG 351

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG G+T D+  PK++
Sbjct: 352 RGTNGQLGHGDTVDRNSPKII 372



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 18/245 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H +A+T       G+++
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE-----NGELY 192

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D   P+ V+  D  +  +  ++ GW H+  VS  G L+T G   
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVM--VACGWRHTISVSSLGGLYTYGWSK 250

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHG++     P K+ +  +K + Q++ G RHS+ L    L   +YG+G  K GQ+G
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGL---LYGWGWNKFGQVG 307

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
           V  D +   S  QV    HD ++V IS     + A++ + ++++WGRG N       T D
Sbjct: 308 VG-DNVDRCSPVQVKF-PHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVD 365

Query: 269 VNCPQ 273
            N P+
Sbjct: 366 RNSPK 370



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 140/297 (47%), Gaps = 22/297 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG G  G+LG G   D L PQ ++ L  L  +  +ACG +H LA+T     + G+V
Sbjct: 86  ELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLR-IKQIACGDSHCLAVT-----MEGEV 139

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            SWGR  +GQLG G   D+L P+ +  F G    I  ++AG  HS  ++++G L+  G G
Sbjct: 140 QSWGRNQNGQLGLGTSEDSLVPQKIQTFQG--VPIKMVAAGAEHSVAITENGELYGWGWG 197

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G LG GD      P KVSS     +  +ACG RH++ +    LG  +Y +G  K GQL
Sbjct: 198 RYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQL 254

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G          +PQ    L D  I  +S     S AL++ G LY WG       G     
Sbjct: 255 G--HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNV 312

Query: 268 DVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           D   P  +  P      Q + GW H + +T    V   G   +G L   + V    P
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 165/380 (43%), Gaps = 60/380 (15%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
           S V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D L P  ++  D  + 
Sbjct: 13  SRVLLISAGASHTVALLS-----GNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQ- 66

Query: 127 TITHISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
            I  I+ G +H+   S+S   L++ G G FG+LGHG+      P  + +     + QIAC
Sbjct: 67  -IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIAC 125

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  H L +  +    +V  +G  + GQLG+  S+D +    +PQ       + I  ++A 
Sbjct: 126 GDSHCLAVTME---GEVQSWGRNQNGQLGLGTSEDSL----VPQKIQTFQGVPIKMVAAG 178

Query: 244 GDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLT 295
            + S A++  G LY WG       G    +D   P+ + S         A GW H + ++
Sbjct: 179 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVS 238

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
             G +   G S +G L       S  P     +K+  L    + Q++ G  HS  +T   
Sbjct: 239 SLGGLYTYGWSKYGQLGHGNFEDSLVP-----QKLQALSDKLISQVSGGWRHSMALT--- 290

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                                      +  WGW + GQ+G+G+  D+  P  V    +F 
Sbjct: 291 -----------------------STGLLYGWGWNKFGQVGVGDNVDRCSPVQV----KFP 323

Query: 416 NRDTQLEVFCGSGFTYAISR 435
           +    +++ CG   T A++ 
Sbjct: 324 HDQKVVQISCGWRHTIAVTE 343


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 170/381 (44%), Gaps = 50/381 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D L P  L+      +  +ACG  H LA +   +    +++S
Sbjct: 34  VCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRN----ELYS 89

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D L P+P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 90  WGWGDFGRLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 147

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ +F    +  +A G  HS+ + ++    ++YG+G G+ G LG+
Sbjct: 148 GQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 204

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R +  P+    +   ++V ++     + ++S+ G LYT+G       G  +  D 
Sbjct: 205 GDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDS 262

Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             PQ L   S    SQ + GW H + LT  G +   G +  G +   + V    P+ V  
Sbjct: 263 LVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF 322

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                    KV+QI+ G  H+  VT                          E   + +WG
Sbjct: 323 PHDQ-----KVVQISCGWRHTIAVT--------------------------EKENVFSWG 351

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG G+T D+  PK++
Sbjct: 352 RGTNGQLGHGDTVDRNSPKII 372



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 18/245 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H +A+T       G+++
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE-----NGELY 192

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D   P+ V+  D  +  +  ++ GW H+  VS  G L+T G   
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVM--VACGWRHTISVSSLGGLYTYGWSK 250

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHG++     P K+ +  +K + Q++ G RHS+ L    L   +YG+G  K GQ+G
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGL---LYGWGWNKFGQVG 307

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
           V  D +   S  QV    HD ++V IS     + A++ + ++++WGRG N       T D
Sbjct: 308 VG-DNVDRCSPVQVKF-PHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVD 365

Query: 269 VNCPQ 273
            N P+
Sbjct: 366 RNSPK 370



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 140/297 (47%), Gaps = 22/297 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG G  G+LG G   D L PQ ++ L  L  +  +ACG +H LA+T     + G+V
Sbjct: 86  ELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLR-IKQIACGDSHCLAVT-----MEGEV 139

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            SWGR  +GQLG G   D+L P+ +  F G    I  ++AG  HS  ++++G L+  G G
Sbjct: 140 QSWGRNQNGQLGLGTSEDSLVPQKIQTFQG--VPIKMVAAGAEHSVAITENGELYGWGWG 197

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G LG GD      P KVSS     +  +ACG RH++ +    LG  +Y +G  K GQL
Sbjct: 198 RYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQL 254

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G          +PQ    L D  I  +S     S AL++ G LY WG       G     
Sbjct: 255 G--HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNV 312

Query: 268 DVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           D   P  +  P      Q + GW H + +T    V   G   +G L   + V    P
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 165/380 (43%), Gaps = 60/380 (15%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
           S V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D L P  ++  D  + 
Sbjct: 13  SRVLLISAGASHTVALLS-----GNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQ- 66

Query: 127 TITHISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
            I  I+ G +H+   S+S   L++ G G FG+LGHG+      P  + +     + QIAC
Sbjct: 67  -IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIAC 125

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  H L +    +  +V  +G  + GQLG+  S+D +    +PQ       + I  ++A 
Sbjct: 126 GDSHCLAV---TMEGEVQSWGRNQNGQLGLGTSEDSL----VPQKIQTFQGVPIKMVAAG 178

Query: 244 GDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLT 295
            + S A++  G LY WG       G    +D   P+ + S         A GW H + ++
Sbjct: 179 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVS 238

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
             G +   G S +G L       S  P     +K+  L    + Q++ G  HS  +T   
Sbjct: 239 SLGGLYTYGWSKYGQLGHGNFEDSLVP-----QKLQALSDKLISQVSGGWRHSMALT--- 290

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                                      +  WGW + GQ+G+G+  D+  P  V    +F 
Sbjct: 291 -----------------------STGLLYGWGWNKFGQVGVGDNVDRCSPVQV----KFP 323

Query: 416 NRDTQLEVFCGSGFTYAISR 435
           +    +++ CG   T A++ 
Sbjct: 324 HDQKVVQISCGWRHTIAVTE 343


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 159/323 (49%), Gaps = 28/323 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V + G G+ G+LG G   ++  P+ + L  +   +S       H LAL        G V+
Sbjct: 400 VSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAE-----TGVVY 454

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG G  G+LGHG       P+ +T  F G   TI +I AG+ HS  V+D G L+T G+G
Sbjct: 455 SWGDGDYGKLGHGNCATHKQPERITGPFLGK--TIKYIHAGYRHSAAVTDDGKLYTWGEG 512

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G+LGHGD  +   P +V+      V  +ACG  H+LV+ KD  G  V+ FGSG+ G+L
Sbjct: 513 DHGRLGHGDSNARYVPTQVAGLA--EVGSVACGSSHTLVVSKD--GKTVWSFGSGEHGKL 568

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSD 268
           G  +  +  V  PQV   L  + I  + A    S AL+  G +YTWG G      ++ + 
Sbjct: 569 GTGE--LGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGKGSADAI 626

Query: 269 VNCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRPLSV 325
           VN P  +     +     + G NH L LT + EV   G +  G        S  TRPL  
Sbjct: 627 VNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPITRPL-- 684

Query: 326 ALEKVSNLDGVKVIQIAAGAEHS 348
              KV  L+GV + QI+AG  HS
Sbjct: 685 ---KVIGLEGVSIRQISAGTSHS 704



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 149/331 (45%), Gaps = 39/331 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-----VSMLACG---GAHVLALTSPSS 87
            V + G G+ G+LG G   D     L +LS +SS     ++ LA       H LAL     
Sbjct: 3378 VLACGEGSYGRLGQGNSDD-----LHSLSVISSLQGFVITDLATSVGSDGHSLALAE--- 3429

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +      +  +  ++ G+ HS  V+  G L
Sbjct: 3430 --SGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQ--VVQVACGFKHSAVVTSDGKL 3485

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G FG+LG G   +   P +V +     + Q+ACG+ H+  +  D  G  V+ FG 
Sbjct: 3486 FTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACVSTD--GMTVWTFGE 3543

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-------WG 260
            G  G+LG+    ++   LPQ    + ++ I  +      +  L+ +G ++        W 
Sbjct: 3544 GDYGKLGLGYATMK--LLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWH 3601

Query: 261  RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              F   + V  PQ +   S  S    A+G  HVL LT  G+VL  G +  G L  P    
Sbjct: 3602 SLFRERA-VFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSL 3660

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
               P     E ++ L    + QI+ G  HSA
Sbjct: 3661 VRHP-----EIITELSDKGIRQISTGRTHSA 3686



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  +ACG  H   +TS      GK+F
Sbjct: 3432 EVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTS-----DGKLF 3486

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGDG 153
            ++G G  G+LG G + +   P+ V   +G+R  I  ++ G NH+  VS  G  ++T G+G
Sbjct: 3487 TFGNGDFGKLGLGSVANKKLPERVMALEGYR--IGQVACGLNHTACVSTDGMTVWTFGEG 3544

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G       P KV +  N  + ++ CG   +L L KD    +V+  G  +    
Sbjct: 3545 DYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKD---GKVFVCGIDRMPWH 3601

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             + ++  R+V  PQ+   L D  I  ++   +    L+  G +  WG
Sbjct: 3602 SLFRE--RAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWG 3646



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 16/232 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G  +    P    ++ L+ V  +ACG +H L ++      G  V+
Sbjct: 505 KLYTWGEGDHGRLGHGDSNARYVPT--QVAGLAEVGSVACGSSHTLVVSKD----GKTVW 558

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G G  G+LG GE+     P+ V    G   TI  + AG   S  ++ +G ++T G G 
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEALQG--LTIQKVCAGTWFSMALTTAGEVYTWGSGA 616

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
               G  D   +  P+ V       +  I+ G  H L L  +   ++V+ +G+   GQ G
Sbjct: 617 ILGKGSADAIVN-LPMYVEDLAQYRIVDISAGDNHCLALTDE---HEVFAWGTNSMGQCG 672

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA---LSAEGHLYTWGRGF 263
                   ++ P   IGL  + I  ISA    S A   +S E H  T  + F
Sbjct: 673 -QGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWTSMSTENHHMTKHKPF 723



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 152/397 (38%), Gaps = 64/397 (16%)

Query: 61  LNLSSLSSVSMLACGGAHVLALTSPSSVIG----GKVFSWGRGSSGQLGHGEMVDALYPK 116
           +NL  + +   +  GG      T+  S +G      V+ WG  SS QL  G     L P 
Sbjct: 314 INLMEILAGMAIDFGGVCSAVETTSESEVGVYEKSDVYVWGSNSSHQLAEGNQEKILMPV 373

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-SSF 175
               F      +  + AG   +  +   G +  CG G++G+LG G+  + S P ++    
Sbjct: 374 KSKMFT----QVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDC 429

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG-------VSKDRIRSVSLPQV 228
           V K +        H+L L +  +   VY +G G  G+LG          +RI    L + 
Sbjct: 430 VVKKLSSSKGSDGHTLALAETGV---VYSWGDGDYGKLGHGNCATHKQPERITGPFLGKT 486

Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFS 282
              +H        A    SAA++ +G LYTWG G +       ++    P  +       
Sbjct: 487 IKYIH--------AGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVG 538

Query: 283 QAALGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
             A G +H LV++ DG+ V   G   HG L   E     RP     + V  L G+ + ++
Sbjct: 539 SVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKVYRP-----QVVEALQGLTIQKV 593

Query: 342 AAGAEHSAVVTGK---FHWVRLFII----SYTPFFPPFFINVIAENR------------- 381
            AG   S  +T     + W    I+    +      P ++  +A+ R             
Sbjct: 594 CAGTWFSMALTTAGEVYTWGSGAILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCLA 653

Query: 382 -----AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                 +  WG    GQ G G+TC  I   +  +G E
Sbjct: 654 LTDEHEVFAWGTNSMGQCGQGHTCSPITRPLKVIGLE 690



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 150/364 (41%), Gaps = 63/364 (17%)

Query: 89   IGGK--VFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            IGGK   + WG    GQL   E+   A  P  V  F   R  I     G N +  +   G
Sbjct: 3323 IGGKCKAYMWGSDRHGQLA--ELGYSASVPVQVESFSIARKII----CGQNCTFVIQSDG 3376

Query: 146  CLFTCGDGTFGQLGHG---DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
             +  CG+G++G+LG G   D  S S    +  FV  ++        HSL L +     +V
Sbjct: 3377 TVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAE---SGEV 3433

Query: 203  YGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            + +G G  G+LG  + DR R    P+    L   ++V ++     SA ++++G L+T+G 
Sbjct: 3434 FSWGDGDFGKLGHGNPDRQRR---PRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGN 3490

Query: 262  ------GFNSTSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDG-EVLMLGGSHHGMLS 312
                  G  S ++   P+ + +   +   Q A G NH   ++ DG  V   G   +G L 
Sbjct: 3491 GDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLG 3550

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT----------GKFHWVRLFI 362
                 ++ + L   +E V NL G+K  ++  G   +  +T           +  W  LF 
Sbjct: 3551 --LGYATMKLLPQKVETVCNL-GIK--KVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLF- 3604

Query: 363  ISYTPFFPPFFINVIA----ENRAIMT--------------WGWGEHGQLGLGNTCDQIH 404
                  F P  +  ++    E+ A+ T              WG    GQLGL +     H
Sbjct: 3605 -RERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRH 3663

Query: 405  PKVV 408
            P+++
Sbjct: 3664 PEII 3667



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 120/301 (39%), Gaps = 52/301 (17%)

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G    GQL    Y S S PV+V SF      +I CG   + V+  D     V   G G  
Sbjct: 3333 GSDRHGQLAELGY-SASVPVQVESF--SIARKIICGQNCTFVIQSD---GTVLACGEGSY 3386

Query: 211  GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSD 268
            G+LG  + D + S+S+     G    ++     +   S AL+  G +++WG G F     
Sbjct: 3387 GRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGH 3446

Query: 269  VNCP-QSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
             N   Q  P  +         Q A G+ H  V+T DG++   G    G L      +   
Sbjct: 3447 GNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKL 3506

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
            P     E+V  L+G ++ Q+A G  H+A V+                          +  
Sbjct: 3507 P-----ERVMALEGYRIGQVACGLNHTACVS-------------------------TDGM 3536

Query: 382  AIMTWGWGEHGQLGLGNTCDQIHPK----VVNLGDEFQNRDTQLEVFC---GSGFTYAIS 434
             + T+G G++G+LGLG    ++ P+    V NLG +     T L +F    G  F   I 
Sbjct: 3537 TVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGID 3596

Query: 435  R 435
            R
Sbjct: 3597 R 3597



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 123/307 (40%), Gaps = 59/307 (19%)

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V +   ++  G  +  QL  G+      PVK   F    V Q+  G   +  +  D    
Sbjct: 344 VYEKSDVYVWGSNSSHQLAEGNQEKILMPVKSKMFTQ--VQQVEAGQYCTFAIHWD---G 398

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTW 259
            V   G G  G+LG+ +    + SLP+  +    ++ +  S   D  + AL+  G +Y+W
Sbjct: 399 SVSACGKGSYGRLGLGESS--NQSLPKRILLDCVVKKLSSSKGSDGHTLALAETGVVYSW 456

Query: 260 GRG-FNSTSDVNC-----PQS-----LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           G G +      NC     P+      L  ++ +  A  G+ H   +T DG++   G   H
Sbjct: 457 GDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHA--GYRHSAAVTDDGKLYTWGEGDH 514

Query: 309 GMLSDPERVSSTRPLSVA-LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
           G L   +  +   P  VA L +V +        +A G+ H+ VV+               
Sbjct: 515 GRLGHGDSNARYVPTQVAGLAEVGS--------VACGSSHTLVVS--------------- 551

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                      + + + ++G GEHG+LG G       P+VV   +  Q    Q +V  G+
Sbjct: 552 ----------KDGKTVWSFGSGEHGKLGTGELGKVYRPQVV---EALQGLTIQ-KVCAGT 597

Query: 428 GFTYAIS 434
            F+ A++
Sbjct: 598 WFSMALT 604


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 149/318 (46%), Gaps = 23/318 (7%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           +++I  A       E+E QV   +SWG G  G+LG G   D  +PQ +       +  +A
Sbjct: 68  TSVICGADHTTAYSEDELQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H LA+T     + G+V SWGR  +GQLG G   D+L P+ +  F+     +  I+A
Sbjct: 125 CGDSHCLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFE--SVCVKMIAA 177

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  V++ G L+  G G +G LG GD      P KVSS   + +  +ACG RH++ +
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV 237

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                GN +Y +G  K GQLG          +P     L D  I  IS     + AL++E
Sbjct: 238 SDS--GN-LYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 254 GHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           G LY WG       G  +  D + P   S P     SQ A GW H L L+    V   G 
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGR 352

Query: 306 SHHGMLSDPERVSSTRPL 323
              G L + E V    P+
Sbjct: 353 GTSGQLGNGEIVDRNTPV 370



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 167/382 (43%), Gaps = 54/382 (14%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           SWG G DGQLG G   D L P +L+     +++ + CG  H  A +        +V+SWG
Sbjct: 36  SWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDEL----QVYSWG 91

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG   D   P+PV    G +  I  I+ G +H   V+ +G + + G    GQ
Sbjct: 92  WGDFGRLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 149

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-- 215
           LG G       P K+ +F +  V  IA G  H+  + +D     +YG+G G+ G LG+  
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
             DR+    LP+    +   ++V ++     +  +S  G+LYT+G       G     D 
Sbjct: 207 RNDRL----LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  + +    + SQ + GW H + LT +G++   G +  G +        + P  V+ 
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +       K+ Q+A G  H+                            ++E + + +WG
Sbjct: 323 PEDQ-----KISQVACGWRHTLA--------------------------LSEKKNVFSWG 351

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G   D+  P +++
Sbjct: 352 RGTSGQLGNGEIVDRNTPVLID 373



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 164/379 (43%), Gaps = 60/379 (15%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           +V +++ G +H +AL     + G  + SWGRG  GQLGHG+  D L P  ++ FD     
Sbjct: 14  TVVLVSAGASHSVAL-----LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAP--A 66

Query: 128 ITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           IT +  G +H + +  D   +++ G G FG+LGHG+     +P  V +     + QIACG
Sbjct: 67  ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             H L +    +  +V  +G  + GQLG+  ++D +    LPQ       + +  I+A  
Sbjct: 127 DSHCLAV---TMAGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFESVCVKMIAAGA 179

Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
           + +AA++ +G LY WG       G    +D   P+ + S         A GW H + ++ 
Sbjct: 180 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            G +   G S +G L   +      P      KV  L    + QI+ G  H+  +T +  
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVP-----HKVEALKDSTISQISGGWRHTMALTSEGK 294

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                                     +  WGW + GQ+G+GN  D   P  V+    F  
Sbjct: 295 --------------------------LYGWGWNKFGQVGVGNNDDHSSPGQVS----FPE 324

Query: 417 RDTQLEVFCGSGFTYAISR 435
                +V CG   T A+S 
Sbjct: 325 DQKISQVACGWRHTLALSE 343



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 7/140 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G    GQLG G   D L P  +     S++S ++ G  H +ALTS      GK++ 
Sbjct: 243 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE-----GKLYG 297

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G   D   P  V+F +  +  I+ ++ GW H+  +S+   +F+ G GT 
Sbjct: 298 WGWNKFGQVGVGNNDDHSSPGQVSFPEDQK--ISQVACGWRHTLALSEKKNVFSWGRGTS 355

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLG+G+    ++PV + + 
Sbjct: 356 GQLGNGEIVDRNTPVLIDAL 375


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 172/354 (48%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSS--LSSVSMLACGGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L   ++   Q+ NLSS  +  VS+ + GG H +ALT     I 
Sbjct: 2474 KVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHS-GGRHAMALT-----IE 2527

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GK+FSWG G  G+LGHG  ++  +PK +  F      +  +S G +HS  +  SG L+T 
Sbjct: 2528 GKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSS--CVRDMSCGSSHSAAILSSGELYTW 2585

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +H  P KV SF +  V  IACG R   +L L  D     V+ +G G
Sbjct: 2586 GLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDD---GTVWSWGDG 2642

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
              G+LG  +      S+P     L    +  ++     S ALS  G ++TWG+      G
Sbjct: 2643 DFGKLG--RGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLG 2700

Query: 263  FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              + + V  PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2701 HGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNR 2760

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            RP     + V+ L+G K+ ++A G+ HS       + T   H   +F +S  P 
Sbjct: 2761 RP-----QLVNGLEGQKITRVACGSSHSIAWAESDLPTPATHEPVMFPVSRDPL 2809



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 10/225 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G DG+LG G  +    P+++       V  ++CGG+H   +T        ++++
Sbjct: 3462 VYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQ-----NHELYT 3516

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D  C+++ GDG +
Sbjct: 3517 WGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDY 3576

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            G+LG G       P+KV S +   V ++ CG + S+ L +      VY +G G   +LG 
Sbjct: 3577 GKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTR---SGAVYTWGKGDYYRLGH 3633

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              D    V  P+    L   +++ I+       A +  G +YTWG
Sbjct: 3634 GVD--DHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWG 3676



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 13/239 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG+G  G+LG G       P L+   +   V  ++CG  H  A+TS      G+++
Sbjct: 37  EVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE-----GELY 91

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGRG+ G+LGHG   D L P  V+   GH        +G  H+   +D G +++ GDG 
Sbjct: 92  TWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGD 151

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G      +P  +       V ++ CG + SL L +D     V+ +G G+  +LG
Sbjct: 152 YGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRD---GSVWTWGKGEGFRLG 208

Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-STSDVNC 271
             ++D +R   L +   G H   +V +S       AL+  G +Y WGR       D++C
Sbjct: 209 HGTEDHVRHPKLVEALDGKH---VVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDC 264



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 127/293 (43%), Gaps = 29/293 (9%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
           G H LALT       G+V+SWG G  G+LGHG+      P  VT   G +  +  IS G 
Sbjct: 26  GKHFLALTRE-----GEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQ--VIRISCGS 78

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVL 193
            HS  V+  G L+T G G +G+LGHG       PV VS     ++  +ACG    H+L  
Sbjct: 79  THSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAA 138

Query: 194 LKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
             D     V+ +G G  G+LG    D  ++   P+    L  + +  +      S AL+ 
Sbjct: 139 ADD---GTVWSWGDGDYGKLGRGGSDGCKN---PKSIERLQGLGVCKVYCGAQFSLALTR 192

Query: 253 EGHLYTWGRGF-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLG 304
           +G ++TWG+G      + T D      L  +L        ++G  H L LT  GEV   G
Sbjct: 193 DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWG 252

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
            +  G L D +     RP       VS L    ++ IA G   S   +    W
Sbjct: 253 RNDQGQLGDID--CQIRPEPTL---VSGLASKGIVGIACGPAQSFAWSCAGQW 300



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 55/321 (17%)

Query: 131  ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
            + +G  H+  +S  G +++ G+G  G+LGHG+  S   P  + +   K V  I+CG  HS
Sbjct: 3446 VHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHS 3505

Query: 191  LVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-R 246
              + ++   +++Y +G G+ G+L  G S+D++    LP+V   L    ++ ++  +GD +
Sbjct: 3506 ACITQN---HELYTWGKGRYGRLGHGDSEDQL----LPKVVEALRGNRVIDVACGSGDAQ 3558

Query: 247  SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG 298
            +  L+ +  +++WG       G   +     P  + S   L  S+   G    + LT  G
Sbjct: 3559 TLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSG 3618

Query: 299  EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
             V   G   +  L         RP     ++V+ L G KVI IA G+ H    T      
Sbjct: 3619 AVYTWGKGDYYRLGHGVDDHVRRP-----KRVAALQGKKVITIATGSLHCVAST------ 3667

Query: 359  RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                                +   + TWG  + GQLG G T     P++V      Q + 
Sbjct: 3668 --------------------DTGEVYTWGDNDEGQLGDGTTNAIARPRLVT---ALQGKK 3704

Query: 419  TQLEVFCGSGFTYAISRHCLP 439
                V CGS  T A S  C P
Sbjct: 3705 IS-RVACGSAHTIAWST-CKP 3723



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 72/156 (46%), Gaps = 7/156 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG G  G+LG G      +P+ +       V  + CG    LALT       G V++
Sbjct: 144 VWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR-----DGSVWT 198

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G   +LGHG      +PK V   DG    +  +S G  H   ++D+G ++  G    
Sbjct: 199 WGKGEGFRLGHGTEDHVRHPKLVEALDGKH--VVDVSVGSIHCLALTDAGEVYCWGRNDQ 256

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           GQLG  D +    P  VS   +K +  IACG   S 
Sbjct: 257 GQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSF 292



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 14/219 (6%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
            ++++WG G  G+LG G   D+L P+++     + V  +ACG   A  L LT         
Sbjct: 3513 ELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDC----- 3567

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LG G       P  V    G    ++ +  G   S  ++ SG ++T G 
Sbjct: 3568 VWSWGDGDYGKLGRGGSDGCKIPMKVESLIG--LGVSKVECGSQFSVALTRSGAVYTWGK 3625

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G + +LGHG       P +V++   K V  IA G  H +         +VY +G    GQ
Sbjct: 3626 GDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDT---GEVYTWGDNDEGQ 3682

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            LG       +++ P++   L   +I  ++     + A S
Sbjct: 3683 LG--DGTTNAIARPRLVTALQGKKISRVACGSAHTIAWS 3719



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 26/237 (10%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +TH      H   ++  G +++ G G  G+LGHGD      P  V+    K V +I+CG 
Sbjct: 21  VTHTDG--KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGS 78

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            HS  +  +    ++Y +G G  G+L  G S+D++    +P +  GL    I+ ++    
Sbjct: 79  THSAAVTSE---GELYTWGRGNYGRLGHGSSEDQL----VPVLVSGLRGHHIIDVACGSG 131

Query: 246 RSAALSA--EGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
            +  L+A  +G +++WG       G   +     P+S+     L   +   G    L LT
Sbjct: 132 DAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALT 191

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            DG V   G      L          P     + V  LDG  V+ ++ G+ H   +T
Sbjct: 192 RDGSVWTWGKGEGFRLGHGTEDHVRHP-----KLVEALDGKHVVDVSVGSIHCLALT 243



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 93/236 (39%), Gaps = 48/236 (20%)

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
           +H L L ++    +VY +GSG  G+LG      R    P +  GL   +++ IS     S
Sbjct: 27  KHFLALTRE---GEVYSWGSGDGGKLGHGDTSPREE--PTLVTGLAGKQVIRISCGSTHS 81

Query: 248 AALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWN--HVLVLTG 296
           AA+++EG LYTWGRG        S+ D   P  L S L        A G    H L    
Sbjct: 82  AAVTSEGELYTWGRGNYGRLGHGSSEDQLVP-VLVSGLRGHHIIDVACGSGDAHTLAAAD 140

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
           DG V   G   +G L          P S+       L G+ V ++  GA+ S  +T    
Sbjct: 141 DGTVWSWGDGDYGKLGRGGSDGCKNPKSI-----ERLQGLGVCKVYCGAQFSLALT---- 191

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                  + ++ TWG GE  +LG G      HPK+V   D
Sbjct: 192 ----------------------RDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALD 225



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 39/148 (26%)

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            H L LT +GEV   G    G L   +      P       V+ L G +VI+I+ G+ HS
Sbjct: 27  KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEP-----TLVTGLAGKQVIRISCGSTHS 81

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A VT +                            + TWG G +G+LG G++ DQ+ P +V
Sbjct: 82  AAVTSEGE--------------------------LYTWGRGNYGRLGHGSSEDQLVPVLV 115

Query: 409 N--LGDEFQNRDTQLEVFCGSGFTYAIS 434
           +   G         ++V CGSG  + ++
Sbjct: 116 SGLRGHHI------IDVACGSGDAHTLA 137



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 33/59 (55%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       +S +ACG AH +A ++   V  G++
Sbjct: 3671 EVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWSTCKPVNAGRL 3729


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 165/335 (49%), Gaps = 29/335 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G DGQLG G  +D+  P L++      V  +ACG  H + L+       G V++
Sbjct: 9   VYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSED-----GAVYT 63

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG  G+LGHG+      P+ V   +G R  I   + G  H+  V+D G L+T G G +
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPRIVEALEGQR--IVQATCGSYHTAAVTDKGELYTWGGGMY 121

Query: 156 GQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           G+LGHG+   H +P  V    ++   V QIACG RH++VL    LG +VY +G  + G +
Sbjct: 122 GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTD--LG-KVYTWGDKENGVV 178

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G +        LP++   L    +  ++A G  +AAL+A G ++TWG       G     
Sbjct: 179 GHTNADGHQY-LPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMER 237

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-----SDPERV--S 318
           +   P+ + + +       A G  H   +   GE+   GG  HG +      D  ++   
Sbjct: 238 NQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHG 297

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
             R +SV    V+ L  + V+++A+  EH+A + G
Sbjct: 298 DVRKVSVP-TLVAGLVKMHVVKVASYNEHTAALAG 331



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 56/267 (20%)

Query: 22  PKIEEEEEEQQVVK----------------VWSWGAGTDGQLGTGRLHDELSPQLLN--L 63
           P+I E  E Q++V+                +++WG G  G+LG G      +P ++    
Sbjct: 83  PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLR 142

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
              + V+ +ACG  H + LT       GKV++WG   +G +GH            T  DG
Sbjct: 143 DEGARVTQIACGSRHTVVLTDL-----GKVYTWGDKENGVVGH------------TNADG 185

Query: 124 HRY-----------TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
           H+Y           T+T ++A   H+  ++ +G +FT G+G FG+LGHG  R+   P  V
Sbjct: 186 HQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMV 245

Query: 173 SSFVNKNVHQIACGMRHSLVLLKD--------CLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
            + + K V  +ACG  HS  +L              QVY FG+G  G+LG     +R VS
Sbjct: 246 EALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLG--HGDVRKVS 303

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALS 251
           +P +  GL  + +V +++  + +AAL+
Sbjct: 304 VPTLVAGLVKMHVVKVASYNEHTAALA 330



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 117/276 (42%), Gaps = 45/276 (16%)

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +G +++ G G  GQLG GD      PV V +  +K V Q+ACG  H++VL +D     VY
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSED---GAVY 62

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G  G+LG   +  + V  P++   L    IV  +     +AA++ +G LYTWG G 
Sbjct: 63  TWGRGDDGRLGHGDNGWKYV--PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGM 120

Query: 264 NSTSDVNCPQSLPS----------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                       P+              +Q A G  H +VLT  G+V   G   +G++  
Sbjct: 121 YGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGH 180

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
                  + L   LE   +L    V Q+AA   H+A +T                     
Sbjct: 181 TN-ADGHQYLPRMLE---SLQAKTVTQVAACGFHTAALTAAGE----------------- 219

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                    I TWG G+ G+LG G   +Q+ P++V 
Sbjct: 220 ---------IFTWGEGKFGRLGHGMERNQMVPRMVE 246



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 74/189 (39%), Gaps = 41/189 (21%)

Query: 254 GHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           G +Y+WGRG         T+D + P  + +  S    Q A G  H +VL+ DG V   G 
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
              G L   +      P       V  L+G +++Q   G+ H+A VT K           
Sbjct: 67  GDDGRLGHGDNGWKYVP-----RIVEALEGQRIVQATCGSYHTAAVTDKGE--------- 112

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 425
                            + TWG G +G+LG GN      P +V    +   R TQ  + C
Sbjct: 113 -----------------LYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQ--IAC 153

Query: 426 GSGFTYAIS 434
           GS  T  ++
Sbjct: 154 GSRHTVVLT 162


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 158/324 (48%), Gaps = 25/324 (7%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G   +   P+ +N  S   V  +A   GG H +ALT     + GK
Sbjct: 2259 KVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT-----VDGK 2313

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  V+ SG L+T G 
Sbjct: 2314 VFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKR--IRDIACGSSHSAAVTSSGELYTWGL 2371

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LGHGD  +   P  V + V K V Q+ACG R +  L     G  VY +G G  G+
Sbjct: 2372 GEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEG-MVYSWGDGDFGK 2430

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            LG  +      S+P     L+   ++ I      S AL+  G ++TWG+      G  + 
Sbjct: 2431 LG--RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTD 2488

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            S V  PQ             A+G  H L +T  G+V   G + HG   D     + +P  
Sbjct: 2489 SHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKP-- 2546

Query: 325  VALEKVSNLDGVKVIQIAAGAEHS 348
             AL  V  L+GV++ ++A G+ HS
Sbjct: 2547 -AL--VQGLEGVRITRVACGSSHS 2567



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 151/359 (42%), Gaps = 37/359 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K+++ G G  G+LG G      +P LL       +  +A   GG H LAL+     + G+
Sbjct: 3234 KLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALS-----VEGE 3288

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG       P+ +    G    +  I+ G  HS  V+ SG L+T G 
Sbjct: 3289 VYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKE--VIDIACGGAHSACVTSSGELYTWGK 3346

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
            G +G+LGHGD      P    +     V  +ACG   S  L   C+ +   V+ +G G  
Sbjct: 3347 GRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTL---CISDDDNVWSWGDGDY 3403

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +       +PQ    L  I +  +      S AL+  G +YTWG+      G  
Sbjct: 3404 GKLG--RGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHG 3461

Query: 265  STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            S   V  P+ + +         A G  H +  +  GEV   G +  G L D    +  RP
Sbjct: 3462 SDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRP 3521

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAV--VTGKFHWVRLFIISYTPFFPPFFINVIAE 379
                   V+ L   K+  +A G+ H+     +   H  RL      P   P   N++ E
Sbjct: 3522 -----RIVTALQDKKITNVACGSAHTVAWSTSKPLHAGRL------PQTVPMEYNLLRE 3569



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 159/392 (40%), Gaps = 63/392 (16%)

Query: 34   VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC-GGAHVLALTSPSSVIGGK 92
             KV+ WG     QLG  R     +P L     LSS+ ++ C GG+  L + +      GK
Sbjct: 2206 TKVFVWGLNDKDQLGGPRGSKIKTPVLNEF--LSSLKVVCCAGGSKSLFVVTAE----GK 2259

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V++ G G++G+LG G   +   PK V     +      + +G  H+  ++  G +F+ G+
Sbjct: 2260 VYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGE 2319

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  G+LGH    +   P  + +   K +  IACG  HS  +       ++Y +G G+ G+
Sbjct: 2320 GDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTS---SGELYTWGLGEYGR 2376

Query: 213  L--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG----F 263
            L  G S  ++R   L +  +G   I++    A G R A    L+ EG +Y+WG G     
Sbjct: 2377 LGHGDSTTQLRP-KLVKALVGKRVIQV----ACGSRDAQTLTLTDEGMVYSWGDGDFGKL 2431

Query: 264  NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                   C  S+P ++         Q   G    L LT  G+V   G   +  L      
Sbjct: 2432 GRGGSEGC--SVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDS 2489

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P     +    L G K+I +A GA H   VT                         
Sbjct: 2490 HVRKP-----QVAEGLKGKKIIHVAVGALHCLAVT------------------------- 2519

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             +   +  WG  +HGQ G G+T     P +V 
Sbjct: 2520 -DTGQVFAWGDNDHGQQGDGSTTVNKKPALVQ 2550



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 153/390 (39%), Gaps = 70/390 (17%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P  +      R     I  G      V+  G L+  
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRP--IQIVGGEQTLFAVTADGKLYAT 3238

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  + ++ ++A   G +H+L L    +  +VY +G G
Sbjct: 3239 GYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALAL---SVEGEVYSWGEG 3295

Query: 209  KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
            + G+LG       DR      P+V   L   E++ I+  G  SA +++ G LYTWG+   
Sbjct: 3296 EDGKLGHGNRTQCDR------PRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRY 3349

Query: 262  ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML--- 311
               G   + D   P+   +   +    +    G +  L ++ D  V   G   +G L   
Sbjct: 3350 GRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG 3409

Query: 312  -SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFI 362
             SD  +V          +KV  L  + V ++  G++ S  +T        GK  + RL  
Sbjct: 3410 GSDGCKVP---------QKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGH 3460

Query: 363  ISYTPFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIH 404
             S      P  +  +   + I                   TWG  + GQLG G T     
Sbjct: 3461 GSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQR 3520

Query: 405  PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            P++V      Q++     V CGS  T A S
Sbjct: 3521 PRIVT---ALQDKKIT-NVACGSAHTVAWS 3546



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 111 DALYPKPVTFFDGHRYTITHISAGWN--HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
           D L PK V+     ++   HI+ G N   +  V+D+G LF+ G+G +G+LG G       
Sbjct: 4   DQLTPKLVSGLKEQKFV--HIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKL 61

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLK 195
           P  V     ++     CG + S++L K
Sbjct: 62  PKLVDKLQGQHAVIACCGNQFSVILTK 88


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 144/317 (45%), Gaps = 23/317 (7%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           S +I  A       +EE Q+   +SWG G  G+LG G   D  +PQ +       ++ +A
Sbjct: 79  SVVICGADHTTAYSDEELQL---YSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 135

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H LA+T     + G V SWGR  +GQLG G   D+L P+ +  F+G R  +  I+A
Sbjct: 136 CGDSHCLAVT-----VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR--VKMIAA 188

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  V++ G L+  G G +G LG GD      P KVSS   + +  +ACG RH++ +
Sbjct: 189 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 248

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                   +Y +G  K GQLG          +P     L D  I  IS     + AL+A+
Sbjct: 249 SSS---GSIYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 303

Query: 254 GHLYTWG------RGFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           G LY WG       G     D   P   + P+     Q A GW H L LT    V   G 
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGR 363

Query: 306 SHHGMLSDPERVSSTRP 322
              G L   E V    P
Sbjct: 364 GTSGQLGHGEIVDRNIP 380



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 169/388 (43%), Gaps = 58/388 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIGG 91
           V SWG G DGQLG G   D   P +L  +   +     S++ CG  H  A +        
Sbjct: 41  VCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEEL---- 96

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +++SWG G  G+LGHG   D   P+P+    G R  IT I+ G +H   V+ +G + + G
Sbjct: 97  QLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVR--ITQIACGDSHCLAVTVAGHVHSWG 154

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
               GQLG G+      P K+ +F    V  IA G  H+  + +D     +YG+G G+ G
Sbjct: 155 RNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTED---GDLYGWGWGRYG 211

Query: 212 QLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
            LG+    DR+    +P+    ++  ++V ++     +  +S+ G +YT+G       G 
Sbjct: 212 NLGLGDRDDRL----IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGH 267

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
               D   P  L +    + SQ + GW H + L  DG++   G +  G +   +      
Sbjct: 268 GDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCS 327

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P+ V           KV+Q+A G  H+  +T                          E +
Sbjct: 328 PVQVNFPNEQ-----KVVQVACGWRHTLALT--------------------------EAK 356

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            + +WG G  GQLG G   D+  PK+++
Sbjct: 357 NVFSWGRGTSGQLGHGEIVDRNIPKMID 384



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 165/393 (41%), Gaps = 60/393 (15%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           DE  P+    +   SV +++ G +H +AL S     GG V SWGRG  GQLGHG+  D  
Sbjct: 11  DEAVPE----APERSVVLISAGASHSVALLS-----GGVVCSWGRGEDGQLGHGDAEDRP 61

Query: 114 YPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPV 170
            P  +T  F D      + +  G +H+   SD    L++ G G FG+LGHG+     +P 
Sbjct: 62  VPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 121

Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
            + +     + QIACG  H L +    +   V+ +G  + GQLG+         LPQ   
Sbjct: 122 PIQALQGVRITQIACGDSHCLAV---TVAGHVHSWGRNQNGQLGLGN--TEDSLLPQKIQ 176

Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFS 282
               + +  I+A  + +AA++ +G LY WG       G     D   P+ + S       
Sbjct: 177 AFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV 236

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
             A GW H + ++  G +   G S +G L   +      P      K+  L    + QI+
Sbjct: 237 LVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDTTISQIS 291

Query: 343 AGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQ 402
            G  H+                            +A +  +  WGW + GQ+G+G+  D 
Sbjct: 292 GGWRHTM--------------------------ALAADGKLYGWGWNKFGQVGVGDNEDH 325

Query: 403 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
             P  VN    F N    ++V CG   T A++ 
Sbjct: 326 CSPVQVN----FPNEQKVVQVACGWRHTLALTE 354



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 5/84 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ WG    GQ+G G   D  SP  +N  +   V  +ACG  H LALT   +V     F
Sbjct: 305 KLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV-----F 359

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV 118
           SWGRG+SGQLGHGE+VD   PK +
Sbjct: 360 SWGRGTSGQLGHGEIVDRNIPKMI 383



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 7/140 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G    GQLG G   D L P  L     +++S ++ G  H +AL +      GK++ 
Sbjct: 254 IYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD-----GKLYG 308

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G+  D   P  V F +  +  +  ++ GW H+  ++++  +F+ G GT 
Sbjct: 309 WGWNKFGQVGVGDNEDHCSPVQVNFPNEQK--VVQVACGWRHTLALTEAKNVFSWGRGTS 366

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLGHG+    + P  + + 
Sbjct: 367 GQLGHGEIVDRNIPKMIDAL 386


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 160/344 (46%), Gaps = 40/344 (11%)

Query: 35  KVWSWGAGTDGQLGTG-------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           KV++ G  T G+LG G       RL   L PQ +   ++ S      GG H +ALT    
Sbjct: 482 KVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHS------GGRHAMALT---- 531

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              G V+SWG G  G+LGHG   DAL P+ +  F      I  IS G +HS  +  SG L
Sbjct: 532 -YDGHVYSWGDGEEGKLGHGSRADALTPRKIETFP--EKCIRDISCGSSHSAAIGSSGTL 588

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGF 205
           +T G G +G+LGHG+  +   P  V +   + V Q+ACG R   +L L +D L   VY +
Sbjct: 589 YTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL---VYSW 645

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G G  G+LG  +       +P+    L   ++V I      S ALS  G ++TWG+    
Sbjct: 646 GDGDFGKLG--RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYF 703

Query: 262 --GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G  S   V  PQ +           A+G  H L +T  G+V   G + HG   +    
Sbjct: 704 RLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTT 763

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
            + +P+     KV  L+GVK+ ++A G+ HS       H  + F
Sbjct: 764 VNRKPM-----KVQGLEGVKITKLACGSSHSIAFADTSHEAQTF 802



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 29/328 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
            KV++ G G  G+LG G       P L+       ++ VS+ A GG H+LAL++      G
Sbjct: 1459 KVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNA-GGKHILALSNE-----G 1512

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +V+SWG G  G+LGHG      +P+ +    G    I  ++ G +HS  ++ +G L+T G
Sbjct: 1513 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGD--LIVKVATGGSHSAAINATGGLYTWG 1570

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQ-VYGFGSG 208
             G +G+LGH D      P  V++  +  V  +ACG     +L + +   G+  V+ +G G
Sbjct: 1571 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1630

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
              G+LG  +       +P +   L    I  ++     S ALS  G +YTWG+      G
Sbjct: 1631 DYGKLG--RGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG 1688

Query: 263  FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              S   V  P+ + S   +   + ++G  H +    +G+V   G +  G + D    ++ 
Sbjct: 1689 HGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQ 1748

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             P  VA      L G  +  ++ G+ H+
Sbjct: 1749 IPRLVAA-----LQGHHISHVSCGSAHT 1771



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P +++      ++ +ACG    LAL+       G V++
Sbjct: 1624 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSK-----AGGVYT 1678

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       PK +    G +  +  +S G  H     D+G ++T GD   
Sbjct: 1679 WGKGDYYRLGHGSDEHVRRPKLIESLRGMK--VVEVSVGSLHCIAAVDNGDVYTWGDNDE 1736

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQ+G G  ++   P  V++    ++  ++CG  H++
Sbjct: 1737 GQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1772



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 27/183 (14%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYP---------KPVTFFDGHRYTITHISAGWNHSGFV 141
            G +F WG    GQLG  E      P         KP+    G +   T           V
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT-----------V 1454

Query: 142  SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLG 199
            +  G +F  G G  G+LG G   S + P  + S  + ++ Q++   G +H L L  +   
Sbjct: 1455 TGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE--- 1511

Query: 200  NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             +VY +G G  G+LG       S+  P++   L    IV ++  G  SAA++A G LYTW
Sbjct: 1512 GEVYSWGEGVDGKLGHGNR--SSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTW 1569

Query: 260  GRG 262
            G+G
Sbjct: 1570 GKG 1572



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 120/302 (39%), Gaps = 55/302 (18%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G     QLG      H +PV         V Q+  G   S  L    +G +VY  G
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGG---SKSLFAVTMGGKVYACG 487

Query: 207 SGKRGQLGV-----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
               G+LG+     S  R+  V  PQ       I+ + + + G  + AL+ +GH+Y+WG 
Sbjct: 488 ESTSGRLGLGPVTGSVSRLTQVLFPQ------PIKKLAVHSGGRHAMALTYDGHVYSWGD 541

Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           G        S +D   P+ + +         + G +H   +   G +   G   +G L  
Sbjct: 542 GEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 601

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
               +  +P     + V  L G +V+Q+A G+  +  +                      
Sbjct: 602 GNNHTLLKP-----KPVQALSGQQVVQVACGSRDAQTL---------------------- 634

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
              + ++  + +WG G+ G+LG G +     PK V   +    +D  +++ CG+ F+ A+
Sbjct: 635 --CLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPV---ERLSGQDV-VKIECGAQFSLAL 688

Query: 434 SR 435
           SR
Sbjct: 689 SR 690



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 53/240 (22%)

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            ++G+G   RGQLG  +     + +P  ++  L  I++VG    G+++   ++ EG ++  
Sbjct: 1408 IFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVG----GEQTLFTVTGEGKVFAT 1463

Query: 260  GRG------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G G        S   V  P  + S   +  +Q ++  G  H+L L+ +GEV   G    G
Sbjct: 1464 GYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDG 1523

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R S   P       + +L G  ++++A G  HSA +                  
Sbjct: 1524 KLGHGNRSSLDHP-----RIIESLRGDLIVKVATGGSHSAAINA---------------- 1562

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSG 428
                         + TWG G +G+LG  ++ DQ+ PK+VN L D        ++V CG+G
Sbjct: 1563 ----------TGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNL-----VVDVACGNG 1607


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 160/344 (46%), Gaps = 40/344 (11%)

Query: 35  KVWSWGAGTDGQLGTG-------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           KV++ G  T G+LG G       RL   L PQ +   ++ S      GG H +ALT    
Sbjct: 483 KVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHS------GGRHAMALT---- 532

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              G V+SWG G  G+LGHG   DAL P+ +  F      I  IS G +HS  +  SG L
Sbjct: 533 -YDGHVYSWGDGEEGKLGHGSRADALTPRKIETFP--EKCIRDISCGSSHSAAIGSSGTL 589

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGF 205
           +T G G +G+LGHG+  +   P  V +   + V Q+ACG R   +L L +D L   VY +
Sbjct: 590 YTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL---VYSW 646

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G G  G+LG  +       +P+    L   ++V I      S ALS  G ++TWG+    
Sbjct: 647 GDGDFGKLG--RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYF 704

Query: 262 --GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G  S   V  PQ +           A+G  H L +T  G+V   G + HG   +    
Sbjct: 705 RLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTT 764

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
            + +P+     KV  L+GVK+ ++A G+ HS       H  + F
Sbjct: 765 VNRKPM-----KVQGLEGVKITKLACGSSHSIAFADTSHEAQTF 803



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 29/328 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
            KV++ G G  G+LG G       P L+       ++ VS+ A GG H+LAL++      G
Sbjct: 1460 KVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNA-GGKHILALSNE-----G 1513

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +V+SWG G  G+LGHG      +P+ +    G    I  ++ G +HS  ++ +G L+T G
Sbjct: 1514 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGD--LIVKVATGGSHSAAINATGGLYTWG 1571

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQ-VYGFGSG 208
             G +G+LGH D      P  V++  +  V  +ACG     +L + +   G+  V+ +G G
Sbjct: 1572 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1631

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
              G+LG  +       +P +   L    I  ++     S ALS  G +YTWG+      G
Sbjct: 1632 DYGKLG--RGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG 1689

Query: 263  FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              S   V  P+ + S   +   + ++G  H +    +G+V   G +  G + D    ++ 
Sbjct: 1690 HGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQ 1749

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             P  VA      L G  +  ++ G+ H+
Sbjct: 1750 IPRLVAA-----LQGHHISHVSCGSAHT 1772



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P +++      ++ +ACG    LAL+       G V++
Sbjct: 1625 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSK-----AGGVYT 1679

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       PK +    G +  +  +S G  H     D+G ++T GD   
Sbjct: 1680 WGKGDYYRLGHGSDEHVRRPKLIESLRGMK--VVEVSVGSLHCIAAVDNGDVYTWGDNDE 1737

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQ+G G  ++   P  V++    ++  ++CG  H++
Sbjct: 1738 GQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1773



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 27/183 (14%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYP---------KPVTFFDGHRYTITHISAGWNHSGFV 141
            G +F WG    GQLG  E      P         KP+    G +   T           V
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT-----------V 1455

Query: 142  SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLG 199
            +  G +F  G G  G+LG G   S + P  + S  + ++ Q++   G +H L L  +   
Sbjct: 1456 TGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE--- 1512

Query: 200  NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             +VY +G G  G+LG       S+  P++   L    IV ++  G  SAA++A G LYTW
Sbjct: 1513 GEVYSWGEGVDGKLGHGNR--SSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTW 1570

Query: 260  GRG 262
            G+G
Sbjct: 1571 GKG 1573



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 120/302 (39%), Gaps = 55/302 (18%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G     QLG      H +PV         V Q+  G   S  L    +G +VY  G
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGG---SKSLFAVTMGGKVYACG 488

Query: 207 SGKRGQLGV-----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
               G+LG+     S  R+  V  PQ       I+ + + + G  + AL+ +GH+Y+WG 
Sbjct: 489 ESTSGRLGLGPVTGSVSRLTQVLFPQ------PIKKLAVHSGGRHAMALTYDGHVYSWGD 542

Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           G        S +D   P+ + +         + G +H   +   G +   G   +G L  
Sbjct: 543 GEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 602

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
               +  +P     + V  L G +V+Q+A G+  +  +                      
Sbjct: 603 GNNHTLLKP-----KPVQALSGQQVVQVACGSRDAQTL---------------------- 635

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
              + ++  + +WG G+ G+LG G +     PK V   +    +D  +++ CG+ F+ A+
Sbjct: 636 --CLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPV---ERLSGQDV-VKIECGAQFSLAL 689

Query: 434 SR 435
           SR
Sbjct: 690 SR 691



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 53/240 (22%)

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            ++G+G   RGQLG  +     + +P  ++  L  I++VG    G+++   ++ EG ++  
Sbjct: 1409 IFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVG----GEQTLFTVTGEGKVFAT 1464

Query: 260  GRG------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G G        S   V  P  + S   +  +Q ++  G  H+L L+ +GEV   G    G
Sbjct: 1465 GYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDG 1524

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R S   P       + +L G  ++++A G  HSA +                  
Sbjct: 1525 KLGHGNRSSLDHP-----RIIESLRGDLIVKVATGGSHSAAINA---------------- 1563

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSG 428
                         + TWG G +G+LG  ++ DQ+ PK+VN L D        ++V CG+G
Sbjct: 1564 ----------TGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNL-----VVDVACGNG 1608


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 146/322 (45%), Gaps = 23/322 (7%)

Query: 12  GKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM 71
           G +++I  A       E+E QV   +SWG G  G+LG G   D  +PQ +       +  
Sbjct: 67  GITSVICGADHTTAYSEDEHQV---YSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           LACG +H LA+T     + G+V SWGR  +GQLG G   D+L P+ +  F+G   ++  I
Sbjct: 124 LACGDSHCLAVT-----MAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEG--ISVKMI 176

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           +AG  H+  V++ G ++  G G +G LG GD      P KVSS     +  +ACG RH++
Sbjct: 177 AAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTI 236

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +        +Y +G  K GQLG          +P     L D     IS     + AL+
Sbjct: 237 TVSSS---GSLYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALT 291

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           ++G LY WG       G    +D   P   + P     +Q A GW H L  T    V   
Sbjct: 292 SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAW 351

Query: 304 GGSHHGMLSDPERVSSTRPLSV 325
           G    G L   E V    P+ +
Sbjct: 352 GRGTSGQLGHGEIVDRNTPVII 373



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 160/380 (42%), Gaps = 50/380 (13%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG G DGQLG G   D L P +++      ++ + CG  H  A +        +V+SWG
Sbjct: 37  TWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEH----QVYSWG 92

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG   D   P+PV    G +  I  ++ G +H   V+ +G + + G    GQ
Sbjct: 93  WGDFGRLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G       P  + +F   +V  IA G  H+  + +D     +YG+G G+ G LG+  
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTED---GDIYGWGWGRYGNLGLGD 207

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
              R V  P+    +   ++V ++     +  +S+ G LYT+G       G     D   
Sbjct: 208 RNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV 265

Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  + +    S SQ + GW H + LT DG++   G +  G +   +      P  V   +
Sbjct: 266 PHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPE 325

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
                  KV Q+A G  H+   T                          E + +  WG G
Sbjct: 326 EQ-----KVAQVACGWRHTLAFT--------------------------EKKNVFAWGRG 354

Query: 390 EHGQLGLGNTCDQIHPKVVN 409
             GQLG G   D+  P +++
Sbjct: 355 TSGQLGHGEIVDRNTPVIID 374



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 140/339 (41%), Gaps = 47/339 (13%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           +SAG +HS  +     L T G G  GQLGHGD      P  +S F    +  + CG  H+
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
               +D   +QVY +G G  G+LG        V  PQ    L  I+I  ++       A+
Sbjct: 79  TAYSED--EHQVYSWGWGDFGRLGHGNS--TDVFTPQPVKALQGIKIKQLACGDSHCLAV 134

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
           +  G + +WGR      G  +T D   PQ++ +   +S    A G  H   +T DG++  
Sbjct: 135 TMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYG 194

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK-----FHW 357
            G   +G L   +R     P     EKVS+++G K++ +A G  H+  V+       + W
Sbjct: 195 WGWGRYGNLGLGDRNDRFVP-----EKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGW 249

Query: 358 VRLFIISYTPF---FPPFFINVIAEN---------RAIMT---------WGWGEHGQLGL 396
            +   + +  F     P  +  + ++         R  M          WGW + GQ+G 
Sbjct: 250 SKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA 309

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G+  D   P  VN    F       +V CG   T A + 
Sbjct: 310 GDNADHCSPAQVN----FPEEQKVAQVACGWRHTLAFTE 344



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 7/140 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G    GQLG G   D L P  +     SS S ++ G  H +ALTS      GK++ 
Sbjct: 244 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD-----GKLYG 298

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G+  D   P  V F +  +  +  ++ GW H+   ++   +F  G GT 
Sbjct: 299 WGWNKFGQVGAGDNADHCSPAQVNFPEEQK--VAQVACGWRHTLAFTEKKNVFAWGRGTS 356

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLGHG+    ++PV + + 
Sbjct: 357 GQLGHGEIVDRNTPVIIDAL 376


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 144/317 (45%), Gaps = 23/317 (7%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           S +I  A       +EE Q+   +SWG G  G+LG G   D  +PQ +       ++ +A
Sbjct: 84  SVVICGADHTTAYSDEELQL---YSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 140

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H LA+T     + G V SWGR  +GQLG G   D+L P+ +  F+G R  +  I+A
Sbjct: 141 CGDSHCLAVT-----VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR--VKMIAA 193

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  V++ G L+  G G +G LG GD      P KVSS   + +  +ACG RH++ +
Sbjct: 194 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 253

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                   +Y +G  K GQLG          +P     L D  I  IS     + AL+A+
Sbjct: 254 SSS---GSIYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 308

Query: 254 GHLYTWG------RGFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           G LY WG       G     D   P   + P+     Q A GW H L LT    V   G 
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGR 368

Query: 306 SHHGMLSDPERVSSTRP 322
              G L   E V    P
Sbjct: 369 GTSGQLGHGEIVDRNIP 385



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 169/388 (43%), Gaps = 58/388 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIGG 91
           V SWG G DGQLG G   D   P +L  +   +     S++ CG  H  A +        
Sbjct: 46  VCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEEL---- 101

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +++SWG G  G+LGHG   D   P+P+    G R  IT I+ G +H   V+ +G + + G
Sbjct: 102 QLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVR--ITQIACGDSHCLAVTVAGHVHSWG 159

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
               GQLG G+      P K+ +F    V  IA G  H+  + +D     +YG+G G+ G
Sbjct: 160 RNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTED---GDLYGWGWGRYG 216

Query: 212 QLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
            LG+    DR+    +P+    ++  ++V ++     +  +S+ G +YT+G       G 
Sbjct: 217 NLGLGDRDDRL----IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGH 272

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
               D   P  L +    + SQ + GW H + L  DG++   G +  G +   +      
Sbjct: 273 GDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCS 332

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P+ V           KV+Q+A G  H+  +T                          E +
Sbjct: 333 PVQVNFPNEQ-----KVVQVACGWRHTLALT--------------------------EAK 361

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            + +WG G  GQLG G   D+  PK+++
Sbjct: 362 NVFSWGRGTSGQLGHGEIVDRNIPKMID 389



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 165/393 (41%), Gaps = 60/393 (15%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           DE  P+    +   SV +++ G +H +AL S     GG V SWGRG  GQLGHG+  D  
Sbjct: 16  DEAVPE----APERSVVLISAGASHSVALLS-----GGVVCSWGRGEDGQLGHGDAEDRP 66

Query: 114 YPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPV 170
            P  +T  F D      + +  G +H+   SD    L++ G G FG+LGHG+     +P 
Sbjct: 67  VPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 126

Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
            + +     + QIACG  H L +    +   V+ +G  + GQLG+         LPQ   
Sbjct: 127 PIQALQGVRITQIACGDSHCLAV---TVAGHVHSWGRNQNGQLGLGN--TEDSLLPQKIQ 181

Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFS 282
               + +  I+A  + +AA++ +G LY WG       G     D   P+ + S       
Sbjct: 182 AFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV 241

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
             A GW H + ++  G +   G S +G L   +      P      K+  L    + QI+
Sbjct: 242 LVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDTTISQIS 296

Query: 343 AGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQ 402
            G  H+                            +A +  +  WGW + GQ+G+G+  D 
Sbjct: 297 GGWRHTM--------------------------ALAADGKLYGWGWNKFGQVGVGDNEDH 330

Query: 403 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
             P  VN    F N    ++V CG   T A++ 
Sbjct: 331 CSPVQVN----FPNEQKVVQVACGWRHTLALTE 359



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 5/84 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ WG    GQ+G G   D  SP  +N  +   V  +ACG  H LALT   +V     F
Sbjct: 310 KLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV-----F 364

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV 118
           SWGRG+SGQLGHGE+VD   PK +
Sbjct: 365 SWGRGTSGQLGHGEIVDRNIPKMI 388



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 7/140 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G    GQLG G   D L P  L     +++S ++ G  H +AL +      GK++ 
Sbjct: 259 IYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD-----GKLYG 313

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G+  D   P  V F +  +  +  ++ GW H+  ++++  +F+ G GT 
Sbjct: 314 WGWNKFGQVGVGDNEDHCSPVQVNFPNEQK--VVQVACGWRHTLALTEAKNVFSWGRGTS 371

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLGHG+    + P  + + 
Sbjct: 372 GQLGHGEIVDRNIPKMIDAL 391


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 162/345 (46%), Gaps = 31/345 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV+  G G +G+LG G   +   P  L+  ++  V  +    GG H L +T       GK
Sbjct: 2922 KVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITRE-----GK 2976

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG++   L P  +   +     I  I+ G +HS  V+  G L+T G 
Sbjct: 2977 VFSWGEGIDGKLGHGDVTSRLSPTLIEALESK--LIVEIACGSSHSAAVTADGELYTWGL 3034

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGKRG 211
            G +G+LGHGD ++   P +V +  +  V  IACG R +  L L D   N V+ +G G  G
Sbjct: 3035 GDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTD--NNCVWSWGDGDFG 3092

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNS 265
            +LG  +      ++PQ    L   ++  I+     S ALS  G ++TWG+G        +
Sbjct: 3093 KLG--RGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGN 3150

Query: 266  TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             S    PQ +   L     ++ A+G  H L +T  GEV   G + HG   +     + RP
Sbjct: 3151 DSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRP 3210

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
              + L     LDGVK+  IA G+ HS    G         +SY P
Sbjct: 3211 -QICL---GELDGVKISHIACGSSHSIAWCGNLQ----LTVSYVP 3247



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G      +P+ +       +  ++CG +H  A+TS      G+++
Sbjct: 3877 EVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSK-----GELY 3931

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK +     ++       +G   +  ++D  C+++ GDG 
Sbjct: 3932 TWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGD 3991

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+++ S +   V ++ CG + S+ L K+     +Y +G G   +LG
Sbjct: 3992 YGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKN---GDLYTWGKGDYYRLG 4048

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              + D +R    P+    L   +IV ++A      A +  G ++TWG
Sbjct: 4049 HGTNDHVRR---PRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWG 4092



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 164/385 (42%), Gaps = 54/385 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V+ WG    GQLG  +     SP ++ N+++L  VS +A G   V  +T       GKV
Sbjct: 2870 RVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVS-IAGGSKTVFIVT-----YDGKV 2923

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            +  G G++G+LG G   +   P  +   + H      +  G  HS  ++  G +F+ G+G
Sbjct: 2924 YVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEG 2983

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHGD  S  SP  + +  +K + +IACG  HS  +  D    ++Y +G G  G+L
Sbjct: 2984 IDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTAD---GELYTWGLGDYGRL 3040

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGR------GFN 264
            G      +++ +P+    L D +++ I A G R A   AL+    +++WG       G  
Sbjct: 3041 GHGDS--KTLHIPKQVKALQDYKVIDI-ACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG 3097

Query: 265  STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +   N PQ + +       + A G    L L+  G+V   G   +  L          P
Sbjct: 3098 GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSP 3157

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
              +       L   ++ +IA GA H   VT                          +   
Sbjct: 3158 QLIE----GPLKKKRITEIAVGALHCLAVT--------------------------DTGE 3187

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKV 407
            + +WG  +HGQ G GNT     P++
Sbjct: 3188 VYSWGDNDHGQQGNGNTTVNKRPQI 3212



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 14/227 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG+G  G+LG G +  E  P+L+       ++ +ACG  +  A+TS      G++++
Sbjct: 534 VYSWGSGDGGRLGHGDIRRE--PELVKELVNKKITQIACGSTYSAAVTS-----NGELYT 586

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRGS G+LGHG   D L P  V    G         +G  H+  +   G +++ GDG +
Sbjct: 587 WGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDY 646

Query: 156 GQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           G+LG G       P  V +    NK +  + CG + S+ L KD     V+ +G     +L
Sbjct: 647 GKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKD---GTVWTWGKSDGYRL 703

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           G     +  V  P++  GL +  IV I+       AL+    ++TWG
Sbjct: 704 G--HGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG 748



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGKV 93
            VWSWG G  G+LG G       P  L + SL   +V  + CG    +ALT       G +
Sbjct: 3984 VWSWGDGDYGKLGRGGSDGCKKP--LRIESLIGMAVCKVECGSQFSVALTK-----NGDL 4036

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG+G   +LGHG       P+ V    G +  I  ++AG  H    +D+G +FT GD 
Sbjct: 4037 YTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQ--IVTVAAGSLHCVACTDAGEVFTWGDN 4094

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
              GQLG+G       P  V+   N  ++++ CG  HS 
Sbjct: 4095 DEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSF 4132



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 10/175 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
           ++++WG G+ G+LG G   D L P L+   S S V  +ACG   AH LA+        G 
Sbjct: 583 ELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDK-----DGI 637

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWG G  G+LG G       PK V     H   I ++  G   S  +   G ++T G 
Sbjct: 638 VWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGK 697

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
               +LGHG       P  V   +N ++  IA G  H L L  +C   Q++ +GS
Sbjct: 698 SDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNC---QIFTWGS 749



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 177/413 (42%), Gaps = 61/413 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            K + WG    GQLG  +     SP + ++ +    + +A G   +  LTS      GKV+
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSE-----GKVY 3825

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            + G G SG+LG G   + + P  +      +     + +G  H+  ++ +  +F+ GDG 
Sbjct: 3826 ASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGE 3885

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
             G+LGHGD  S  +P K+ + + K +  I+CG  HS  +       ++Y +G G+ G+LG
Sbjct: 3886 DGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSK---GELYTWGKGRYGRLG 3942

Query: 215  --VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRG----FNST 266
                 D ++    P++   L   +++ ++  +GD ++ A++ +  +++WG G        
Sbjct: 3943 HGDGDDCLK----PKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG 3998

Query: 267  SDVNCPQSLPSS----LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                C + L       ++  +   G    + LT +G++   G   +  L         RP
Sbjct: 3999 GSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRP 4058

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  KV+ L G +++ +AAG+ H    T                          +   
Sbjct: 4059 -----RKVACLQGKQIVTVAAGSLHCVACT--------------------------DAGE 4087

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ-NRDTQLEVFCGSGFTYAIS 434
            + TWG  + GQLG G       P +V + +  + NR     V CGS  ++A S
Sbjct: 4088 VFTWGDNDEGQLGNGTLNPIPEPTLVTVLENVKLNR-----VGCGSAHSFAWS 4135



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 140/349 (40%), Gaps = 55/349 (15%)

Query: 89   IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
            I  +VF WG    GQLG  +      P  +      R     I+ G      V+  G ++
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPV--SIAGGSKTVFIVTYDGKVY 2924

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFG 206
              G+G  G+LG G+  + S PV++ +     V ++    G RHSL + ++    +V+ +G
Sbjct: 2925 VSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITRE---GKVFSWG 2981

Query: 207  SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
             G  G+LG     + S   P +   L    IV I+     SAA++A+G LYTWG G    
Sbjct: 2982 EGIDGKLG--HGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGR 3039

Query: 263  --FNSTSDVNCPQSLPSSLSFSQAALGWN----HVLVLTGDGEVLMLGGSHHGMLSDPER 316
                 +  ++ P+ + +   +    +         L LT +  V   G    G L     
Sbjct: 3040 LGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGS 3099

Query: 317  VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV--TGKFHWVRLFIISYTPFFPPFFI 374
                 P     +K+  L G  V +IA GA+ S  +  TGK                    
Sbjct: 3100 EGCNIP-----QKIDALCGRDVCRIACGAQFSLALSTTGK-------------------- 3134

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 423
                    + TWG G++ +LG GN      P+++  G   + R T++ V
Sbjct: 3135 --------VWTWGKGDYYRLGHGNDSHYRSPQLIE-GPLKKKRITEIAV 3174



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 32/200 (16%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  + C   +++ALT+      G+V+S        L +    +A    PV         I
Sbjct: 471 IKQIMCSSDNIIALTN-----NGRVYS--------LAYNARCEA----PVLLDSLIDIKI 513

Query: 129 THISAGWN--HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
             I+A     H   +S  GC+++ G G  G+LGHGD R    P  V   VNK + QIACG
Sbjct: 514 KKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRRE--PELVKELVNKKITQIACG 571

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISA-N 243
             +S  +  +    ++Y +G G  G+L  G S+DR+    LP +  GL    +V ++  +
Sbjct: 572 STYSAAVTSN---GELYTWGRGSYGRLGHGNSEDRL----LPTLVAGLSGSHVVDVACGS 624

Query: 244 GD-RSAALSAEGHLYTWGRG 262
           GD  + A+  +G +++WG G
Sbjct: 625 GDAHTLAIDKDGIVWSWGDG 644



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 58/266 (21%)

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
           + QI C   + + L  +    +VY      R +  V  D             L DI+I  
Sbjct: 471 IKQIMCSSDNIIALTNN---GRVYSLAYNARCEAPVLLD------------SLIDIKIKK 515

Query: 240 ISAN--GDRSAALSAEGHLYTWGRGFNST---SDVNCPQSLPSSL---SFSQAALGWNHV 291
           I+AN  G+   ALS++G +Y+WG G        D+     L   L     +Q A G  + 
Sbjct: 516 IAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKELVNKKITQIACGSTYS 575

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             +T +GE+   G   +G L          P  VA      L G  V+ +A G+      
Sbjct: 576 AAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVA-----GLSGSHVVDVACGS------ 624

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT-CDQIHPKVVNL 410
            G  H +                  I ++  + +WG G++G+LG G + C ++ PKVV  
Sbjct: 625 -GDAHTL-----------------AIDKDGIVWSWGDGDYGKLGRGGSDCCKV-PKVV-- 663

Query: 411 GDEFQNRDTQL-EVFCGSGFTYAISR 435
            +  ++ +  +  V CGS F+ A+ +
Sbjct: 664 -ETLKHHNKYIVNVLCGSQFSVALGK 688



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 51/242 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGH 255
            + ++V+ +G   +GQLG  K  +++S +  +    L  + I G    G ++   ++ +G 
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAG----GSKTVFIVTYDGK 2922

Query: 256  LYTWGRGFN------STSDVNCPQSLPS-SLSFSQAAL---GWNHVLVLTGDGEVLMLGG 305
            +Y  G G N      +T +++ P  L + ++ F +      G  H L +T +G+V   G 
Sbjct: 2923 VYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGE 2982

Query: 306  SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
               G L   +  S   P       +  L+   +++IA G+ HSA VT             
Sbjct: 2983 GIDGKLGHGDVTSRLSP-----TLIEALESKLIVEIACGSSHSAAVTA------------ 3025

Query: 366  TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 425
                          +  + TWG G++G+LG G++     PK V    +++     +++ C
Sbjct: 3026 --------------DGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYK----VIDIAC 3067

Query: 426  GS 427
            GS
Sbjct: 3068 GS 3069


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 170/381 (44%), Gaps = 50/381 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D LSP  L+      +  + CG  H    T+  SV   +V+S
Sbjct: 29  VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADH----TTAYSVARTEVYS 84

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D L PKP+     H   I  I+ G +H   V+  G + + G    
Sbjct: 85  WGWGDFGRLGHGNSSDLLTPKPIKAL--HGLKIRQIACGDSHCLAVTMEGEVQSWGRNQN 142

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ +F   ++  +A G  H+  + +D    +++G+G G+ G LG+
Sbjct: 143 GQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTED---GELFGWGWGRYGNLGL 199

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R V  PQ    +   ++V ++     + ++S+ G LYT+G       G     D 
Sbjct: 200 GDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDR 257

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +    + SQ + GW H + LT DG++   G +  G +   + +    P+ +  
Sbjct: 258 LVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKF 317

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +       KVIQI+ G  H+  VT K                          + + +WG
Sbjct: 318 PQDQ-----KVIQISCGWRHTLAVTDK--------------------------QNVFSWG 346

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG G + D+  P ++
Sbjct: 347 RGTNGQLGHGESVDRNTPMIL 367



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 154/322 (47%), Gaps = 31/322 (9%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V+SWG G  G+LG G   D L+P+ +       +  +ACG +H LA+T     + G+V
Sbjct: 80  TEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVT-----MEGEV 134

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            SWGR  +GQLG G   D+L P+ +  F+G   +I  ++AG  H+  V++ G LF  G G
Sbjct: 135 QSWGRNQNGQLGLGTTEDSLVPQKIQAFEG--ISIKMVAAGAEHTAAVTEDGELFGWGWG 192

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G LG GD      P KVSS     +  +ACG RH++ +    LG  +Y +G  K GQL
Sbjct: 193 RYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQL 249

Query: 214 GVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV-- 269
           G    +DR+    +P     L    I  IS     + AL+ +G LY W  G+N    V  
Sbjct: 250 GHGDFEDRL----VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGW--GWNKFGQVGA 303

Query: 270 --NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
             N     P  + F       Q + GW H L +T    V   G   +G L   E V    
Sbjct: 304 GDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNT 363

Query: 322 PLSVALEKVSNLDGVKVIQIAA 343
           P+   LE +S +DG    QI +
Sbjct: 364 PM--ILEALS-VDGCSGQQIES 382



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 166/382 (43%), Gaps = 60/382 (15%)

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
           S +  V  ++ G +H +AL S     G  V SWGRG  GQLGHG+  D L P  ++  DG
Sbjct: 5   SPVRRVLFISAGASHSVALLS-----GNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDG 59

Query: 124 HRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           H   I  ++ G +H+   S +   +++ G G FG+LGHG+     +P  + +     + Q
Sbjct: 60  HE--IVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQ 117

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
           IACG  H L +    +  +V  +G  + GQLG+  ++D +    +PQ       I I  +
Sbjct: 118 IACGDSHCLAV---TMEGEVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFEGISIKMV 170

Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
           +A  + +AA++ +G L+ WG       G    +D   PQ + S         A GW H +
Sbjct: 171 AAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTI 230

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            ++  G +   G S +G L   +      P      ++  L G  + QI+ G  H+  +T
Sbjct: 231 SVSSLGGLYTYGWSKYGQLGHGDFEDRLVP-----HRLEALRGDNISQISGGWRHTMALT 285

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                      +  +  WGW + GQ+G G+  D   P  +    
Sbjct: 286 --------------------------TDGKLYGWGWNKFGQVGAGDNIDHCSPIQI---- 315

Query: 413 EFQNRDTQLEVFCGSGFTYAIS 434
           +F      +++ CG   T A++
Sbjct: 316 KFPQDQKVIQISCGWRHTLAVT 337


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 160/379 (42%), Gaps = 46/379 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D LSP  L+      +  + CG  H +A +        +V+S
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRM----EVYS 91

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 92  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
                R V     + G   + +V        S + S   + Y W +    G     D   
Sbjct: 207 GDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLV 266

Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  L +  +   SQ + GW H + LT DG++   G +  G +     +    P+ V +  
Sbjct: 267 PHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIP- 325

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 355

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  PK++
Sbjct: 356 TNGQLGIGESLDRNFPKII 374



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 12/230 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT   G + ++  ++ GW H+  VS SG L+T G   
Sbjct: 195 GWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD   H  P K+ +  N  + QI+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 253 YGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           V  + +   S  QV I   D ++V +S     + A++   +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRI-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 168/377 (44%), Gaps = 56/377 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D L P  ++  D H+  I
Sbjct: 17  VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQ--I 69

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S+S   +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 70  VSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +    +  +V  +G  + GQLG+         +PQ       I I  ++A  + +
Sbjct: 130 SHCLAV---TMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMVAAGAEHT 184

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
           AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++  G 
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      K+  L    + QI+ G  H+  +T       
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLVP-----HKLEALGNSVISQISGGWRHTMALT------- 292

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                               +  +  WGW + GQ+G+GN  DQ  P  V + D+ +    
Sbjct: 293 -------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQK---- 329

Query: 420 QLEVFCGSGFTYAISRH 436
            ++V CG   T A++  
Sbjct: 330 VVQVSCGWRHTLAVTER 346



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 140/297 (47%), Gaps = 20/297 (6%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + G+V
Sbjct: 87  MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----MEGEV 141

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            SWGR  +GQLG G+  D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  G G
Sbjct: 142 QSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGWGWG 199

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G LG GD      P +V+S   + +  +ACG RH++ +        +Y +G  K GQL
Sbjct: 200 RYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV---SYSGALYTYGWSKYGQL 256

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G     +    +P     L +  I  IS     + AL+++G LY WG       G  +  
Sbjct: 257 G--HGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 268 DVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           D   P    +P      Q + GW H L +T    V   G   +G L   E +    P
Sbjct: 315 DQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFP 371


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
           harrisii]
          Length = 4865

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  VS+ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDGV + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ +I  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4016 EAGRNVMIPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4070

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4071 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4122

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4123 SDRQRRPRQIEALQGEE--VIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4180

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4181 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4236

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4237 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4296

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  + +     L G  + Q
Sbjct: 4297 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKNIRQ 4351

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4352 ISAGRCHSAAWTA 4364



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 4003 VYLWGAGRHGQLAEAGR--NVMIPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4053

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4054 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4113

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4114 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4170

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4171 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4228

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4229 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4286

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4287 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4317

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P ++ +
Sbjct: 4318 AWGSNSEGQLGLGHTNHVREPTLITV 4343



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA+S +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 37/305 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G    +  P+L+       V +    G    A  S      G+++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED----GELY 533

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGDG 153
           +WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G G
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    L
Sbjct: 590 DNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--ACL 644

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NST 266
           G       ++  P++   L    IV IS       ALS +  +Y WG          NST
Sbjct: 645 GCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             +  P+ +     ++  Q + G +H L  T              +  D + V+  RP  
Sbjct: 704 GPITKPKKVSGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPYC 750

Query: 325 VALEK 329
           V LE+
Sbjct: 751 VDLEE 755



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   P    SF      Q+ CG   + V+  +     V   G
Sbjct: 4003 VYLWGAGRHGQLAEAG-RNVMIPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 4056

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 4057 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4116

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 4117 KLGHGNSDR---QRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4173

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 4174 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVS---------------------- 4206

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
               A+   +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A++
Sbjct: 4207 ---ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALT 4259

Query: 435  R 435
            +
Sbjct: 4260 K 4260



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   ++ DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 169/383 (44%), Gaps = 50/383 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D LSP  L+      V  + CG  H  A +   +    +V+S
Sbjct: 37  VCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFT----QVYS 92

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P+P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 93  WGWGDFGRLGHGNSSDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQN 150

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ +F   +V  +A G  H+  + +D    ++YG+G G+ G LG+
Sbjct: 151 GQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED---GELYGWGWGRYGNLGL 207

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R V  P+    +  +++V ++     + ++S+ G LYT+G       G     D 
Sbjct: 208 GDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDH 265

Query: 270 NCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +      S+ + GW H + LT DG++   G +  G +   + V    P+ V  
Sbjct: 266 LTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 325

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                    KV+ I+ G  H+  VT                          E + + +WG
Sbjct: 326 PHEQ-----KVVHISCGWRHTLAVT--------------------------ERQNVFSWG 354

Query: 388 WGEHGQLGLGNTCDQIHPKVVNL 410
            G +GQLG G + D+  PK++ +
Sbjct: 355 RGTNGQLGHGESIDRNIPKMIEV 377



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 131/247 (53%), Gaps = 18/247 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +      SV M+A G  H  A+T       G+++
Sbjct: 141 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED-----GELY 195

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V+  +G +  +  ++ GW H+  VS SG L+T G   
Sbjct: 196 GWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK--MVKVACGWRHTISVSSSGGLYTYGWSK 253

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+  H +P K+ +     + +I+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSD---GKLYGWGWNKFGQVG 310

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
           V  D +   S  QV    H+ ++V IS     + A++   ++++WGRG N       + D
Sbjct: 311 VG-DNVDHCSPVQVKF-PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 368

Query: 269 VNCPQSL 275
            N P+ +
Sbjct: 369 RNIPKMI 375



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 168/378 (44%), Gaps = 60/378 (15%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D L P  ++  DGH   +
Sbjct: 18  VLLISAGASHSVALLS-----GNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHE--V 70

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S+S   +++ G G FG+LGHG+     +P  + +     + QIACG 
Sbjct: 71  VSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGD 130

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H L +  D    +V  +G  + GQLG+  ++D +    +PQ       + +  ++A  +
Sbjct: 131 SHCLAVTMD---GEVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFQGVSVKMVAAGAE 183

Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGD 297
            +AA++ +G LY WG       G    +D   P+ + +   +   + A GW H + ++  
Sbjct: 184 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSS 243

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           G +   G S +G L   +      P      K+  L    + +I+ G  H+  +T     
Sbjct: 244 GGLYTYGWSKYGQLGHGDFEDHLTP-----HKLEALQENLISEISGGWRHTMALT----- 293

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                                 +  +  WGW + GQ+G+G+  D   P  V    +F + 
Sbjct: 294 ---------------------SDGKLYGWGWNKFGQVGVGDNVDHCSPVQV----KFPHE 328

Query: 418 DTQLEVFCGSGFTYAISR 435
              + + CG   T A++ 
Sbjct: 329 QKVVHISCGWRHTLAVTE 346



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 139/307 (45%), Gaps = 24/307 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           +   +V+SWG G  G+LG G   D  +PQ +       +  +ACG +H LA+T     + 
Sbjct: 85  ESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVT-----MD 139

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G   D+L P+ +  F G   ++  ++AG  H+  V++ G L+  
Sbjct: 140 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQG--VSVKMVAAGAEHTAAVTEDGELYGW 197

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P KVS+     + ++ACG RH++ +        +Y +G  K 
Sbjct: 198 GWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSS---GGLYTYGWSKY 254

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG           P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 255 GQLG--HGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGW--GWNKFGQVG 310

Query: 270 ---NCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N     P  + F         + GW H L +T    V   G   +G L   E +   
Sbjct: 311 VGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRN 370

Query: 321 RPLSVAL 327
            P  + +
Sbjct: 371 IPKMIEV 377


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
           boliviensis boliviensis]
          Length = 4860

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSS--PQK 4231

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4232 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4291

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4346

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4347 ISAGRCHSAAWTA 4359



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4223

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4282 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4312

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVT 4337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3992 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4043

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4100

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4136

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4137 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4173

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4174 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4203

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4204 GSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4255



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Pongo abelii]
          Length = 4864

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4015 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4069

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4070 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4121

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4122 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4179

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4180 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4235

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4236 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGVI 4295

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4296 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4350

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4351 ISAGRCHSAAWTA 4363



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 165/385 (42%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 4002 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4052

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4053 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4169

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4170 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4227

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4228 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQ 4287

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
            + L     L GV +  +A GAEH+                            +A N  + 
Sbjct: 4288 IPL-----LAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4316

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4317 AWGSNSEGQLGLGHTNHVREPTLVT 4341



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3996 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4047

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4104

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4105 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4140

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4141 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4177

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4178 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4207

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4208 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4259



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4005 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4059

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4060 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4111

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4112 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4169

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4170 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4225

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4226 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4285

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4286 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4340

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4341 ISAGRCHSAAWTA 4353



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3992 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4042

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4043 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4159

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4160 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4217

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4218 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4275

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 4276 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 4306

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4307 AWGSNSEGQLGLGHTNHVREPTLVT 4331



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3986 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4037

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4094

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4095 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4130

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4131 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4167

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4168 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4197

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4198 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4249



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
           mulatta]
          Length = 4824

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3975 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4029

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4030 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4081

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4082 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4139

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4140 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4195

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4196 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4255

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4256 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4310

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4311 ISAGRCHSAAWTA 4323



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3962 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4012

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4013 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4072

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4073 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4129

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4130 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4187

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4188 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4245

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 4246 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 4276

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4277 AWGSNSEGQLGLGHTNHVREPTLVT 4301



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3956 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4007

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4008 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4064

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4065 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4100

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4101 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4137

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4138 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4167

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4168 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4219



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 161/379 (42%), Gaps = 46/379 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D  SP  L+      +  + CG  H +A +      G +V+S
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 92  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
                R V     + G   + +V        S + S   + Y W +    G     D   
Sbjct: 207 GDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  L + S SF SQ + GW H + LT DG++   G +  G +     +    P+ V    
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 355

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  PK++
Sbjct: 356 TNGQLGIGESVDRNFPKII 374



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 171/380 (45%), Gaps = 60/380 (15%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           +V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DGH+  
Sbjct: 16  TVLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ-- 68

Query: 128 ITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           I  ++ G +H+   S SG  +++ G G FG+LGHG+     +P+ + +     + QIACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             H L +    +  +V  +G  + GQLG+  ++D +    +PQ       I I  ++A  
Sbjct: 129 DSHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIRIKMVAAGA 181

Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTG 296
           + +AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++ 
Sbjct: 182 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            G +   G S +G L   +      P      K+  L    + QI+ G  H+  +T    
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALT---- 292

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                                  +  +  WGW + GQ+G+GN  DQ  P  V     F +
Sbjct: 293 ----------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPD 326

Query: 417 RDTQLEVFCGSGFTYAISRH 436
               ++V CG   T A++  
Sbjct: 327 DQKVVQVSCGWRHTLAVTER 346



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT   G + ++  ++ GW H+  VS SG L+T G   
Sbjct: 195 GWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD   H  P K+ +  N  + QI+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           V  + +   S  QV     D ++V +S     + A++   +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + 
Sbjct: 84  QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G+  D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 196

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P +V+S   + +  +ACG RH++ +        +Y +G  K 
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG     +    +P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309

Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N  Q  P  + F       Q + GW H L +T    V   G   +G L   E V   
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369

Query: 321 RP 322
            P
Sbjct: 370 FP 371


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
           gallus]
          Length = 4860

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDGV + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQVV              V + G G+ G+LG G   D  
Sbjct: 4011 EAGRNVMVPVAAPSFSQA---QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H++ +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTVAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4231

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  S + 
Sbjct: 4232 VDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVF 4291

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L+  G+V   G +  G L          P  + +     L G  + Q
Sbjct: 4292 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKNIRQ 4346

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4347 ISAGRCHSAAWTA 4359



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P  +   S S    + CG      + +      G V 
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVP--VAAPSFSQAQQVVCGQNCTFVIQA-----NGTVL 4048

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4165

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4223

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4224 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               ++V  L GV +  IA GAEH+                            ++    + 
Sbjct: 4282 ---QQVPVLSGVFIEDIAVGAEHTLA--------------------------LSSTGDVY 4312

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P ++ +
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLITV 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     +S  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGVSIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   PV   SF      Q+ CG   + V+  +     V   G
Sbjct: 3998 VYLWGAGRHGQLAEAG-RNVMVPVAAPSF--SQAQQVVCGQNCTFVIQAN---GTVLACG 4051

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 4052 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 4112 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4168

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 4169 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTVAVS---------------------- 4201

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
                +   +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A++
Sbjct: 4202 ---TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIK----KVACGTQFSVALT 4254

Query: 435  R 435
            +
Sbjct: 4255 K 4255



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 167/373 (44%), Gaps = 58/373 (15%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P            +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4118 SDRQRRPX-------QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4170

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4171 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4226

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4227 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4286

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4287 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4341

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4342 ISAGRCHSAAWTA 4354



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 164/385 (42%), Gaps = 61/385 (15%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P +      + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPXQ-----GEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4160

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4161 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4218

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4219 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4276

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4277 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4307

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4308 AWGSNSEGQLGLGHTNHVREPTLVT 4332



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 50/296 (16%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   P    SF      Q+ CG   + V+  +     V   G
Sbjct: 3998 VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 4051

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 4052 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 264  ---NSTSDVNCPQSLPSS-LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
               +  SD    Q  P       Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4112 KLGHGNSDR---QRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4168

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4169 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4198

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4199 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4250



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
           [Callithrix jacchus]
          Length = 4860

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4231

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4232 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 4291

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4346

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4347 ISAGRCHSAAWTA 4359



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               ++V  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4282 ---QQVPVLAGVVIEDVAVGAEHTLA--------------------------LASNGDVY 4312

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVT 4337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3992 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4043

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4100

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4136

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4137 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4173

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4174 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4203

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4204 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4255



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
           paniscus]
          Length = 4798

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3949 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4003

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4004 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4055

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4056 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4113

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4114 PERVTALEGYQIGQVACGLNHTLAVSVD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4169

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4170 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4229

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4230 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4284

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4285 ISAGRCHSAAWTA 4297



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 165/385 (42%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3936 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3986

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 3987 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4046

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4047 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4103

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 4104 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4161

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4162 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4219

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4220 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4250

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4251 AWGSNSEGQLGLGHTNHVREPTLVT 4275



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 142/356 (39%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3930 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 3981

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 3982 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4038

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4039 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4074

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4075 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4111

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                          +
Sbjct: 4112 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------VD 4141

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4142 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4193



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  + Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNIRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 4283 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVT 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
          Length = 4861

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVT 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3997 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4051

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4052 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4103

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4104 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4161

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4162 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4217

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4218 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4277

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4278 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4332

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4333 ISAGRCHSAAWTA 4345



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3984 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4034

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4151

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4152 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4209

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4210 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4267

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 4268 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 4298

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4299 AWGSNSEGQLGLGHTNHVREPTLVT 4323



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3978 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4029

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4086

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4087 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4122

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4123 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4159

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4160 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4189

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4190 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4241



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 161/379 (42%), Gaps = 46/379 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D  SP  L+      +  + CG  H +A +      G +V+S
Sbjct: 37  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 92

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 93  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 150

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 151 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 207

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
                R V     + G   + +V        S + S   + Y W +    G     D   
Sbjct: 208 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 267

Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  L + S SF SQ + GW H + LT DG++   G +  G +     +    P+ V    
Sbjct: 268 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 326

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 327 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 356

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  PK++
Sbjct: 357 TNGQLGIGESVDRNFPKII 375



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 166/376 (44%), Gaps = 56/376 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DGH+  I
Sbjct: 18  VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 70

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S SG  +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 71  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 130

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  +    +V  +G  + GQLG+       V  PQ       I I  ++A  + +
Sbjct: 131 SHCLAVTME---GEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHT 185

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
           AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++  G 
Sbjct: 186 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      K+  L    + QI+ G  H+  +T       
Sbjct: 246 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALT------- 293

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                               +  +  WGW + GQ+G+GN  DQ  P  V     F +   
Sbjct: 294 -------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQK 330

Query: 420 QLEVFCGSGFTYAISR 435
            ++V CG   T A++ 
Sbjct: 331 VVQVSCGWRHTLAVTE 346



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G ++
Sbjct: 141 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 195

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT   G + ++  ++ GW H+  VS SG L+T G   
Sbjct: 196 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 253

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD   H  P K+ +  N  + QI+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 254 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 310

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           V  + +   S  QV     D ++V +S     + A++   +++ WGRG N
Sbjct: 311 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 358



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 147/318 (46%), Gaps = 24/318 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + 
Sbjct: 85  QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 139

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G+  D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  
Sbjct: 140 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 197

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P +V+S   + +  +ACG RH++ +        +Y +G  K 
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 254

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG     +    +P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 255 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 310

Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N  Q  P  + F       Q + GW H L +T    V   G   +G L   E V   
Sbjct: 311 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 370

Query: 321 RPLSVALEKVSNLDGVKV 338
            P  +    V    G  +
Sbjct: 371 FPKIIEALSVDGASGQHI 388


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 149/317 (47%), Gaps = 47/317 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           GG V++WGRG  G+LGHG+      P+      G    ITH++ G  H+  VS  G LFT
Sbjct: 25  GGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQ--VITHVTCGSYHTAAVSSKGNLFT 82

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS-LVLLKDCLGNQVYGFGSG 208
            G G +G+LGHG+   HS+P +V S V   V  IACG RH+ +V  + CL    Y +G  
Sbjct: 83  WGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCL----YTWGDK 138

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
           + G  G   D       P++   L    +V +SA G  +  L+  G +YTWG G      
Sbjct: 139 ENGVAG-HGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLG 197

Query: 265 STSDVNC--PQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
             ++ NC  P+ + + L     Q + G  H  V+T DG++   GG  HG L   ++V+  
Sbjct: 198 HGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKV 257

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
           +P       V +LDGV + QI  G  HS  +T                           +
Sbjct: 258 KP-----TLVKDLDGVFLTQITCGWSHSVALT--------------------------SS 286

Query: 381 RAIMTWGWGEHGQLGLG 397
             + TWG G+HG+LG G
Sbjct: 287 HEVYTWGNGDHGKLGHG 303



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 151/326 (46%), Gaps = 28/326 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG G DG+LG G    +  P+L +  +   ++ + CG  H  A++S      G +F+
Sbjct: 28  VYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSK-----GNLFT 82

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG       PK V    G    +  I+ G  H+  V+  GCL+T GD   
Sbjct: 83  WGGGMYGKLGHGNESGHSTPKRVDSLVG--LAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140

Query: 156 GQLGHGDYRSHS-SPVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           G  GHGD   H  +P  +     K V Q+ ACG  H+  L       +VY +G GK G+L
Sbjct: 141 GVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGF-HTGCLTD---AGEVYTWGEGKFGRL 196

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDV 269
           G   +  R+   P++   L     V IS  G  SA ++A+G +YT+G G          V
Sbjct: 197 GHGAE--RNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKV 254

Query: 270 N-CPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           N    +L   L     +Q   GW+H + LT   EV   G   HG L        + P   
Sbjct: 255 NKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTP--- 311

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVV 351
             + V  L G KV+ +A+  EH+A +
Sbjct: 312 --QLVEKLVGQKVVCVASYNEHTACL 335



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 7/161 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G  G+LG G   +  SP+L+          ++CGG H   +T+      GK++
Sbjct: 184 EVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTAD-----GKMY 238

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G G  GQLGHG+ V+ + P  V   DG    +T I+ GW+HS  ++ S  ++T G+G 
Sbjct: 239 TFGGGEHGQLGHGDKVNKVKPTLVKDLDG--VFLTQITCGWSHSVALTSSHEVYTWGNGD 296

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            G+LGHG  +  S+P  V   V + V  +A    H+  L++
Sbjct: 297 HGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 111/275 (40%), Gaps = 47/275 (17%)

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G ++T G G  G+LGHGD      P    S   + +  + CG  H+  +     GN ++ 
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSK--GN-LFT 82

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G  G+LG   +   S   P+    L  + +V I+     +A +++ G LYTWG   N
Sbjct: 83  WGGGMYGKLGHGNESGHST--PKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140

Query: 265 STS---DVNCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
             +   D    Q  P  L           +A G+ H   LT  GEV   G    G L   
Sbjct: 141 GVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGF-HTGCLTDAGEVYTWGEGKFGRLGHG 199

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
              +   P       V  L G + +QI+ G  HSAVVT                      
Sbjct: 200 AERNCHSP-----RLVETLLGKRPVQISCGGFHSAVVTA--------------------- 233

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                +  + T+G GEHGQLG G+  +++ P +V 
Sbjct: 234 -----DGKMYTFGGGEHGQLGHGDKVNKVKPTLVK 263


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 161/379 (42%), Gaps = 46/379 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D  SP  L+      +  + CG  H +A +      G +V+S
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 92  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
                R V     + G   + +V        S + S   + Y W +    G     D   
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  L + S SF SQ + GW H + LT DG++   G +  G +     +    P+ V    
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 355

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  PK++
Sbjct: 356 TNGQLGIGESVDRNFPKII 374



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 170/379 (44%), Gaps = 60/379 (15%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DGH+  I
Sbjct: 17  VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 69

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S SG  +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 70  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H L +    +  +V  +G  + GQLG+  ++D +    +PQ       I I  ++A  +
Sbjct: 130 SHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIRIKMVAAGAE 182

Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGD 297
            +AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++  
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 242

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           G +   G S +G L   +      P      K+  L    + QI+ G  H+  +T     
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALT----- 292

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                                 +  +  WGW + GQ+G+GN  DQ  P  V     F + 
Sbjct: 293 ---------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDD 327

Query: 418 DTQLEVFCGSGFTYAISRH 436
              ++V CG   T A++  
Sbjct: 328 QKVVQVSCGWRHTLAVTER 346



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT   G + ++  ++ GW H+  VS SG L+T G   
Sbjct: 195 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD   H  P K+ +  N  + QI+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           V  + +   S  QV     D ++V +S     + A++   +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + 
Sbjct: 84  QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G+  D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 196

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P +V+S   + +  +ACG RH++ +        +Y +G  K 
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG     +    +P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309

Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N  Q  P  + F       Q + GW H L +T    V   G   +G L   E V   
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369

Query: 321 RP 322
            P
Sbjct: 370 FP 371


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
           gorilla gorilla]
          Length = 4502

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3653 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3707

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 3708 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 3759

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 3760 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 3817

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 3818 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 3873

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 3874 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 3933

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 3934 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTV-----VTGLQGKNVRQ 3988

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 3989 ISAGRCHSAAWTA 4001



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3640 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3690

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 3691 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3750

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 3751 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 3807

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 3808 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3865

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 3866 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 3923

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 3924 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 3954

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P VV 
Sbjct: 3955 AWGSNSEGQLGLGHTNHVREPTVVT 3979



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 30/288 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           T  +  P+ +     ++  Q + G +H L  T     L     HH  L
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA----LPRDREHHSFL 746



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3634 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 3685

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 3686 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 3742

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 3743 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 3778

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 3779 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 3815

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 3816 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 3845

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 3846 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 3897



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4004 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4058

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4059 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4110

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4111 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4168

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4169 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4224

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4225 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4284

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4285 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4339

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4340 ISAGRCHSAAWTA 4352



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3991 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4041

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4042 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4158

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4159 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4216

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4217 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4274

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 4275 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 4305

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4306 AWGSNSEGQLGLGHTNHVREPTLVT 4330



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3985 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4036

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4093

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4094 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4129

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4130 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4166

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4167 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4196

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4197 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4248



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Felis catus]
          Length = 4861

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4293 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4283 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        V  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  V +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKVV 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVE 609


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4005 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4059

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4060 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4111

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4112 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4169

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4170 PERVTALEGYQIGQVACGLNHTLAVSVD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4225

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4226 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4285

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4286 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4340

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4341 ISAGRCHSAAWTA 4353



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 165/385 (42%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3992 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4042

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4043 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4159

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 4160 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4217

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4218 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4275

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4276 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4306

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4307 AWGSNSEGQLGLGHTNHVREPTLVT 4331



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 142/356 (39%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3986 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4037

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4094

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4095 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4130

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4131 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4167

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                          +
Sbjct: 4168 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------VD 4197

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4198 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4249



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  + Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNIRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 4283 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVT 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 4283 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVT 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Ornithorhynchus anatinus]
          Length = 4866

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDGV + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ +I    P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4017 EAGRNVMIPAGAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4071

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4072 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4123

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G +FT G+G +G+LG G+  +   
Sbjct: 4124 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKL 4181

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4182 PERVTALEGYQIGQVACGLNHTLAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4237

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4238 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 4297

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L +T  G+V   G +  G L          P  + +     L G  + Q
Sbjct: 4298 IEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKNIRQ 4352

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4353 ISAGRCHSAAWTA 4365



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 165/386 (42%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 4004 VYLWGAGRHGQLAEAGR--NVMIPA--GAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4054

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4055 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4114

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4115 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKMFTFGNGDYGRL 4171

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 4172 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4229

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4230 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4287

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               ++V  L GV +  +A GAEH+  +T                              + 
Sbjct: 4288 ---QQVPVLAGVVIEDVAVGAEHTLAITSTGD--------------------------VY 4318

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P ++ +
Sbjct: 4319 AWGSNSEGQLGLGHTNHVREPTLITV 4344



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 139/353 (39%), Gaps = 95/353 (26%)

Query: 89   IGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
            +GGK  V+ WG G  GQL      + + P     F   +  I     G N +  +  +G 
Sbjct: 3998 LGGKCDVYLWGAGRHGQLAEAGR-NVMIPAGAPSFSQAQQVI----CGQNCTFVIQANGT 4052

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGNQVY 203
            +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     +V+
Sbjct: 4053 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SGEVF 4109

Query: 204  GFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
             +G G  G+LG  + DR R    P+    L   E+V                        
Sbjct: 4110 SWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV------------------------ 4142

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                                Q + G+ H  V+T DG++   G   +G L      +   P
Sbjct: 4143 --------------------QMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLP 4182

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                 E+V+ L+G ++ Q+A G  H+  V+                          +   
Sbjct: 4183 -----ERVTALEGYQIGQVACGLNHTLAVS-------------------------TDGSM 4212

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4213 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4261



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Meleagris gallopavo]
          Length = 4334

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDGV + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 168/376 (44%), Gaps = 59/376 (15%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQVV              V + G G+ G+LG G   D  
Sbjct: 3485 EAGRNVMVPVAAPSFSQA---QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3539

Query: 57   SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
                  L  L+ +S L          +CG   H +ALT       G+VFSWG G  G+LG
Sbjct: 3540 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 3588

Query: 106  HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
            HG       P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +
Sbjct: 3589 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 3646

Query: 166  HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
               P +V++     + Q+ACG+ H++ +  D  G+ V+ FG G  G+LG+     +S   
Sbjct: 3647 KKLPERVTALEGYQIGQVACGLNHTVAVSMD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 3702

Query: 226  PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
            PQ    L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  S
Sbjct: 3703 PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLS 3762

Query: 278  SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
             +     A+G  H L L+  G+V   G +  G L          P  + +     L G  
Sbjct: 3763 GVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKN 3817

Query: 338  VIQIAAGAEHSAVVTG 353
            + QI+AG  HSA  T 
Sbjct: 3818 IRQISAGRCHSAAWTA 3833



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P  +   S S    + CG      + +      G V 
Sbjct: 3472 VYLWGAGRHGQLAEAGR--NVMVP--VAAPSFSQAQQVVCGQNCTFVIQA-----NGTVL 3522

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 3523 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3582

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 3583 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 3639

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 3640 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS 3697

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 3698 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 3755

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               ++V  L GV +  IA GAEH+                            ++    + 
Sbjct: 3756 ---QQVPVLSGVFIEDIAVGAEHTLA--------------------------LSSTGDVY 3786

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P ++ +
Sbjct: 3787 AWGSNSEGQLGLGHTNHVREPTLITV 3812



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     +S  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGVSIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   PV   SF      Q+ CG   + V+  +     V   G
Sbjct: 3472 VYLWGAGRHGQLAEAG-RNVMVPVAAPSF--SQAQQVVCGQNCTFVIQAN---GTVLACG 3525

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 3526 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3585

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 3586 KLGHGNSD---RQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 3642

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 3643 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTVAVS---------------------- 3675

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
                +   +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A++
Sbjct: 3676 ---MDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIK----KVACGTQFSVALT 3728

Query: 435  R 435
            +
Sbjct: 3729 K 3729



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Equus caballus]
          Length = 4860

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4231

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4232 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4291

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P  V +     L G  + Q
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4346

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4347 ISAGRCHSAAWTA 4359



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4223

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4282 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASNGDVY 4312

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 35/145 (24%)

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H + LT  GEV   G   +G L         RP      ++  L G +V+Q++ G +HSA
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4146

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            VVT                           +  + T+G G++G+LGLGNT ++  P+ V 
Sbjct: 4147 VVTS--------------------------DGKLFTFGNGDYGRLGLGNTSNKKLPERVT 4180

Query: 410  LGDEFQNRDTQLEVFCGSGFTYAIS 434
              + +Q      +V CG   T A+S
Sbjct: 4181 ALEGYQIG----QVACGLNHTLAVS 4201



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Pan troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSVD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 165/385 (42%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVT 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 142/356 (39%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                          +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------VD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVT 4338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 161/379 (42%), Gaps = 46/379 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D  SP  L+      +  + CG  H +A +      G +V+S
Sbjct: 25  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 80

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 81  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 138

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 139 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 195

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
                R V     + G   + +V        S + S   + Y W +    G     D   
Sbjct: 196 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255

Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  L + S SF SQ + GW H + LT DG++   G +  G +     +    P+ V    
Sbjct: 256 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 315 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 344

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  PK++
Sbjct: 345 TNGQLGIGESVDRNFPKII 363



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 166/376 (44%), Gaps = 56/376 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DGH+  I
Sbjct: 6   VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 58

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S SG  +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 59  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 118

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  +    +V  +G  + GQLG+       V  PQ       I I  ++A  + +
Sbjct: 119 SHCLAVTME---GEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHT 173

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
           AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++  G 
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      K+  L    + QI+ G  H+  +T       
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALT------- 281

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                               +  +  WGW + GQ+G+GN  DQ  P  V     F +   
Sbjct: 282 -------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQK 318

Query: 420 QLEVFCGSGFTYAISR 435
            ++V CG   T A++ 
Sbjct: 319 VVQVSCGWRHTLAVTE 334



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G ++
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 183

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT   G + ++  ++ GW H+  VS SG L+T G   
Sbjct: 184 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 241

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD   H  P K+ +  N  + QI+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 298

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           V  + +   S  QV     D ++V +S     + A++   +++ WGRG N
Sbjct: 299 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 146/315 (46%), Gaps = 24/315 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + 
Sbjct: 73  QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 127

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G+  D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  
Sbjct: 128 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 185

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P +V+S   + +  +ACG RH++ +        +Y +G  K 
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 242

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG     +    +P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 243 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 298

Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N  Q  P  + F       Q + GW H L +T    V   G   +G L   E V   
Sbjct: 299 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 358

Query: 321 RPLSVALEKVSNLDG 335
            P  +    V    G
Sbjct: 359 FPKIIEALSVDGASG 373


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 168/382 (43%), Gaps = 51/382 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D L P  L+      +  + CG  H LA  S S V   +V+S
Sbjct: 36  VCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAY-SESKV---EVYS 91

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P+P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 92  WGWGDFGRLGHGNSSDLFIPQPIRALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ +F    +  +A G  HS+ + ++    ++YG+G G+ G LG+
Sbjct: 150 GQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R +  P+  + +   ++V ++     + ++S+ G LYT+G       G     D 
Sbjct: 207 GDRNDRCI--PE-KVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDH 263

Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L   S     Q + GW H + LT  G++   G +  G +   + V    P+ V  
Sbjct: 264 LVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKF 323

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                    KV QI+ G  H+  VT                          E   + +WG
Sbjct: 324 PHDQ-----KVAQISCGWRHTIAVT--------------------------EKDNVYSWG 352

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG+G+T D  +PK++ 
Sbjct: 353 RGTNGQLGIGDTIDWNYPKIIE 374



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 130/245 (53%), Gaps = 19/245 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H +A+T       G+++
Sbjct: 140 EVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE-----NGELY 194

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D   P+ V+  D  +  +  ++ GW H+  VS SG L+T G   
Sbjct: 195 GWGWGRYGNLGLGDRNDRCIPEKVSV-DCDKMVL--VACGWRHTISVSSSGELYTYGWSK 251

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD + H  P K+ +F +K + Q++ G RH++ L     G Q+YG+G  K GQ+G
Sbjct: 252 YGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTT---GGQLYGWGWNKFGQVG 308

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
           V  D +   S  QV    HD ++  IS     + A++ + ++Y+WGRG N       T D
Sbjct: 309 VG-DNVDRCSPVQVKF-PHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTID 366

Query: 269 VNCPQ 273
            N P+
Sbjct: 367 WNYPK 371



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 139/339 (41%), Gaps = 48/339 (14%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           ISAG +HS  +     + + G G  GQLGHGD      P ++S+   + +  + CG  H+
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHT 79

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           L   +  +  +VY +G G  G+LG        + +PQ    L  + I  I+       A+
Sbjct: 80  LAYSESKV--EVYSWGWGDFGRLGHGNS--SDLFIPQPIRALQGLRIKQIACGDSHCLAV 135

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
           + EG + +WGR      G  +T D   PQ + +   +     A G  H + +T +GE+  
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYG 195

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK-----FHW 357
            G   +G L   +R     P     EKVS +D  K++ +A G  H+  V+       + W
Sbjct: 196 WGWGRYGNLGLGDRNDRCIP-----EKVS-VDCDKMVLVACGWRHTISVSSSGELYTYGW 249

Query: 358 VR------------LFIISYTPFFPPFFINVIAENRAIMT---------WGWGEHGQLGL 396
            +            L       F       V    R  M          WGW + GQ+G+
Sbjct: 250 SKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGV 309

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G+  D+  P  V    +F +     ++ CG   T A++ 
Sbjct: 310 GDNVDRCSPVQV----KFPHDQKVAQISCGWRHTIAVTE 344



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 54/268 (20%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDI 235
           + V  I+ G  HS+ L+    GN V  +G G+ GQLG   + DR+    LP     L   
Sbjct: 15  RRVLLISAGGSHSVALIS---GNVVCSWGRGEDGQLGHGDTDDRL----LPTQLSALDAQ 67

Query: 236 EIVGISANGDRSAALS-AEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAAL 286
           +IV +    D + A S ++  +Y+WG       G  ++SD+  PQ + +   L   Q A 
Sbjct: 68  QIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIAC 127

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
           G +H L +T +GEV   G + +G L        T   S+  +K+    GV +  +AAGAE
Sbjct: 128 GDSHCLAVTMEGEVQSWGRNQNGQLG-----LGTTEDSLVPQKIQTFQGVPIKMVAAGAE 182

Query: 347 HSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
           HS  +T                          EN  +  WGWG +G LGLG+  D+  P+
Sbjct: 183 HSVAIT--------------------------ENGELYGWGWGRYGNLGLGDRNDRCIPE 216

Query: 407 VVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            V++     + D  + V CG   T ++S
Sbjct: 217 KVSV-----DCDKMVLVACGWRHTISVS 239


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 426 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 480

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 481 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 538

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 539 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 594

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 595 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 652

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 653 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 709

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDGV + QI+AG  HS   T 
Sbjct: 710 KP-KKVSGLDGVAIQQISAGTSHSLAWTA 737



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 158/331 (47%), Gaps = 37/331 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 4139 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4190

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 4191 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKL 4246

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++     + ++ACG+ H+LV+  D  G+ V+ FG 
Sbjct: 4247 FTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTD--GSMVWAFGD 4304

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 4305 GDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4362

Query: 264  --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  S +     A+G  H L L+  G+V   G +  G L        
Sbjct: 4363 PEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHV 4422

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
              P       V++L G  V QI+AG  HSA 
Sbjct: 4423 REP-----TLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +T+      GK+F
Sbjct: 4193 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA-----DGKLF 4247

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ V   +G  Y I  ++ G NH+  VS  G + +  GDG
Sbjct: 4248 TFGNGDYGRLGLGNTSNKKLPERVAALEG--YQIGEVACGLNHTLVVSTDGSMVWAFGDG 4305

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 4306 DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4360

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ    L  + +  I+   + + ALSA G +Y WG
Sbjct: 4361 GLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWG 4407



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 163/385 (42%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + +SP      S      + CG      + +      G V 
Sbjct: 4090 VFLWGAGRHGQLAEAGR--NAVSPP--PSPSFCQAQQVICGQNCTFVIQA-----NGTVL 4140

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4141 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4200

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4201 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4257

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + +  +S +G +        +G+ G  ++
Sbjct: 4258 GLGNTSNKK--LPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4316 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4373

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               ++V  L GV V  IA GAEH+  ++                              + 
Sbjct: 4374 ---QQVPALSGVFVEDIAVGAEHTLALSASGD--------------------------VY 4404

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 4405 AWGSNSEGQLGLGHTNHVREPTLVT 4429



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 375 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 430

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 431 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 487

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 488 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 545

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 546 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 605

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 606 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 658

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 659 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 715



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 480 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 534

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 535 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 590

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 591 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 645

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 646 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 704

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 705 TGPITKPKKVSGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 751

Query: 324 SVALEK 329
            V LE+
Sbjct: 752 CVDLEE 757



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            +F  G G  GQL     R+  SP    SF      Q+ CG   + V+  +     V   G
Sbjct: 4090 VFLWGAGRHGQLAEAG-RNAVSPPPSPSFCQ--AQQVICGQNCTFVIQAN---GTVLACG 4143

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 4144 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4203

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 4204 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4260

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ ++A G  H+ VV+                      
Sbjct: 4261 NTSNKKLP-----ERVAALEGYQIGEVACGLNHTLVVS---------------------- 4293

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
                +   +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A++
Sbjct: 4294 ---TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIK----KVACGTQFSVALT 4346

Query: 435  R 435
            +
Sbjct: 4347 K 4347



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 49/280 (17%)

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D    
Sbjct: 370 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD---G 424

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLYT 258
            V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG +++
Sbjct: 425 SVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 483

Query: 259 WGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    G
Sbjct: 484 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 543

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L   +  S++R +   ++ +SN     V +++ G+ H+                     
Sbjct: 544 RLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT--------------------- 575

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
               I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 576 ----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 611


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
           cuniculus]
          Length = 4860

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4231

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4232 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 4291

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  + Q
Sbjct: 4292 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4346

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4347 ISAGRCHSAAWTA 4359



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               ++V  L GV +  +A GAEH+                            +A    + 
Sbjct: 4282 ---QQVPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4312

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4313 AWGSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3992 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4043

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4100

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4136

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4137 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4173

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4174 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4203

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4204 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4255



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
           domestica]
          Length = 4790

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDGV + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ +I  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3941 EAGRNVMIPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3995

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 3996 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4047

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4048 SDRQRRPRQIEALQGEE--VIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4105

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4106 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4161

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4162 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4221

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  + +     L G  + Q
Sbjct: 4222 IEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITI-----LQGKNIRQ 4276

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4277 ISAGRCHSAAWTA 4289



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3928 VYLWGAGRHGQLAEAGR--NVMIPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3978

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 3979 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4038

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4039 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4095

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4096 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4153

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4154 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4211

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  IA GAEH+                            +A    + 
Sbjct: 4212 ---QQIPVLAGVVIEDIAVGAEHTLA--------------------------LASTGDVY 4242

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P ++ +
Sbjct: 4243 AWGSNSEGQLGLGHTNHVREPTLITI 4268



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   M+ A  P   +F    +     +  G N +  +  
Sbjct: 3922 LGGKCDVYLWGAGRHGQLAEAGRNVMIPAAAP---SFSQAQQ-----VICGQNCTFVIQA 3973

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 3974 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4030

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E++                     
Sbjct: 4031 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVI--------------------- 4066

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4067 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4103

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4104 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4133

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4134 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4185



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Ailuropoda melanoleuca]
          Length = 4861

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4293 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4283 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        V  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  V +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKVV 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVE 609


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4007 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4061

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4062 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4113

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4114 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4171

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4172 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4227

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4228 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4287

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4288 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4342

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4343 ISAGRCHSAAWTA 4355



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3994 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4044

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4045 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4104

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4105 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4161

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4162 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4220 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4277

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4278 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4308

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4309 AWGSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3988 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4039

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4096

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4097 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4132

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4133 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4169

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4170 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4199

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4200 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4251



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4021 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4075

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4076 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4127

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4128 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4185

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4186 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4241

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4242 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4301

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4302 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4356

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4357 ISAGRCHSAAWTA 4369



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 4008 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4058

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4059 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4175

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4176 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4234 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4291

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4292 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4322

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4323 AWGSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        V  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  V +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 4002 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4053

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4110

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4111 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4146

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4147 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4183

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4184 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4213

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4214 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4265



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKVV 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVE 609


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
           mutus]
          Length = 4874

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 422 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 476

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 534

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 535 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 590

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 591 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 648

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 649 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 705

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 706 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 733



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 169/383 (44%), Gaps = 63/383 (16%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4014 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4068

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4069 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4120

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4121 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4178

Query: 169  PVKVSSFVNKNV----------HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
            P +V++     +           Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+   
Sbjct: 4179 PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNS 4236

Query: 219  RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCP 272
              +S   PQ    L  I I  ++     S AL+ +GH+YT+G+            + N P
Sbjct: 4237 TAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP 4294

Query: 273  QSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
            Q +P  + +     A+G  H L L   G+V   G +  G L          P  V +   
Sbjct: 4295 QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV--- 4351

Query: 331  SNLDGVKVIQIAAGAEHSAVVTG 353
              L G  V QI+AG  HSA  T 
Sbjct: 4352 --LQGKNVRQISAGRCHSAAWTA 4372



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 165/404 (40%), Gaps = 82/404 (20%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 4001 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4051

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4052 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4111

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4112 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4168

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
            G+     +   LP+    L                    EG  Y  G+  N+T       
Sbjct: 4169 GLGNTSNK--KLPERVTAL--------------------EG--YQIGQARNNT------- 4197

Query: 274  SLPSSLSFSQAALGWNHVLVLTGDGEVL-MLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
                 L F Q A G NH L ++ DG ++   G   +G L      + + P     +KV  
Sbjct: 4198 -----LFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSP-----QKVDV 4247

Query: 333  LDGVKVIQIAAGAEHSAVVTGKFHWV-----RLFIISY-------TPFFPPFFINVIAEN 380
            L G+ + ++A G + S  +T   H       RL  +          P   P    V+ E+
Sbjct: 4248 LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIED 4307

Query: 381  RA--------------IMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
             A              +  WG    GQLGLG+T     P +V +
Sbjct: 4308 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4351



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 426

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 427 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 483

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 484 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 541

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 542 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 601

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 602 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 654

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 655 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 711



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 476 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 530

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 531 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 586

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 587 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 641

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 642 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 700

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 701 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 747

Query: 324 SVALEK 329
            V LE+
Sbjct: 748 CVDLEE 753



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 37/151 (24%)

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H + LT  GEV   G   +G L         RP      ++  L G +V+Q++ G +HSA
Sbjct: 4095 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4149

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV- 408
            VVT                           +  + T+G G++G+LGLGNT ++  P+ V 
Sbjct: 4150 VVTS--------------------------DGKLFTFGNGDYGRLGLGNTSNKKLPERVT 4183

Query: 409  -----NLGDEFQNRDTQLEVFCGSGFTYAIS 434
                  +G    N    L+V CG   T A+S
Sbjct: 4184 ALEGYQIGQARNNTLFFLQVACGLNHTLAVS 4214



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 419

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 420 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 479 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 538

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 539 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 571

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 572 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 607


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4010 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4064

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4065 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4116

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4117 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4230

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4231 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4290

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4345

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4346 ISAGRCHSAAWTA 4358



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4311

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3991 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4042

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4099

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4135

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4136 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4172

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4173 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4202

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4203 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4254



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
           garnettii]
          Length = 4828

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3979 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4033

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4034 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4085

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4086 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4143

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4144 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4199

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4200 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4259

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P  V +     L G  + Q
Sbjct: 4260 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4314

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4315 ISAGRCHSAAWTA 4327



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 167/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3966 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4016

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4017 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4076

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4077 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4133

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4134 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4191

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4192 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4249

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 4250 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASNGDVY 4280

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4281 AWGSNSEGQLGLGHTNHVREPTLVTV 4306



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 35/145 (24%)

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H + LT  GEV   G   +G L         RP      ++  L G +V+Q++ G +HSA
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4114

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            VVT                           +  + T+G G++G+LGLGNT ++  P+ V 
Sbjct: 4115 VVTS--------------------------DGKLFTFGNGDYGRLGLGNTSNKKLPERVT 4148

Query: 410  LGDEFQNRDTQLEVFCGSGFTYAIS 434
              + +Q      +V CG   T A+S
Sbjct: 4149 ALEGYQIG----QVACGLNHTLAVS 4169



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV +S       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4001 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4055

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4056 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4107

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4108 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4165

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4166 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4221

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4222 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4281

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4282 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4336

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4337 ISAGRCHSAAWTA 4349



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3988 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4038

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4039 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4098

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4099 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4155

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4156 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4213

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4214 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4271

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4272 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4302

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4303 AWGSNSEGQLGLGHTNHVREPTLVTV 4328



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3982 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4033

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4034 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4090

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4091 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4126

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4127 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4163

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4164 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4193

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4194 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4245



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 161/324 (49%), Gaps = 28/324 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 422 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 476

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 534

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 535 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 590

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 591 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 648

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 649 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 705

Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
              +KVS LDG+ + QI+AG  HS
Sbjct: 706 KP-KKVSGLDGIAIQQISAGTSHS 728



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 164/373 (43%), Gaps = 64/373 (17%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3550 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3604

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 3605 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 3656

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 3657 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 3714

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V           ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 3715 PERV-----------ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 3759

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 3760 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 3819

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 3820 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 3874

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 3875 ISAGRCHSAAWTA 3887



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 164/380 (43%), Gaps = 55/380 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3537 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3587

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 3588 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3647

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 3648 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 3704

Query: 214  GVSKDRIRSVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
            G+     +   LP+ V  GL+    + +SA+G    A   +G     G G NST+  + P
Sbjct: 3705 GLGNTSNK--KLPERVACGLN--HTLAVSADGSMVWAF-GDGDYGKLGLG-NSTAK-SSP 3757

Query: 273  QSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
            Q +     +   + A G    + LT DG V   G      L +    +  RP     ++V
Sbjct: 3758 QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQV 3812

Query: 331  SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
              L GV +  +A GAEH+                            +A    +  WG   
Sbjct: 3813 PVLAGVVIEDVAVGAEHTL--------------------------ALASTGDVYAWGSNS 3846

Query: 391  HGQLGLGNTCDQIHPKVVNL 410
             GQLGLG+T     P +V +
Sbjct: 3847 EGQLGLGHTNHVREPTLVTV 3866



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 426

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 427 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 483

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 484 DYGKLGHGNSSTQ--KYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 541

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 542 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 601

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 602 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 654

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 655 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 711



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 476 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 530

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 531 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 586

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 587 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 641

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 642 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 700

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 701 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 747

Query: 324 SVALEK 329
            V LE+
Sbjct: 748 CVDLEE 753



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 31/122 (25%)

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H + LT  GEV   G   +G L         RP      ++  L G +V+Q++ G +HSA
Sbjct: 3631 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 3685

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            VVT                           +  + T+G G++G+LGLGNT ++  P+ V 
Sbjct: 3686 VVTS--------------------------DGKLFTFGNGDYGRLGLGNTSNKKLPERVA 3719

Query: 410  LG 411
             G
Sbjct: 3720 CG 3721



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 419

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 420 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 479 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 538

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 539 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 571

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 572 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 607


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
           africana]
          Length = 4858

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4009 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4063

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4064 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4115

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4116 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4173

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4174 PERVTALEGYQIGQVACGLNHTLAVSSD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4229

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4230 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4289

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4290 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4344

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4345 ISAGRCHSAAWTA 4357



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3996 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4046

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4047 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4106

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4107 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4163

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S++G +        +G+ G  ++
Sbjct: 4164 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS 4221

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4222 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4279

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4280 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4310

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4311 AWGSNSEGQLGLGHTNHVREPTLVTV 4336



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3990 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4041

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4042 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4098

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4099 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4134

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4135 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4171

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         ++
Sbjct: 4172 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------SD 4201

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4202 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4253



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I  V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4846

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 161/329 (48%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      ++  VS       H LA TS      G+
Sbjct: 419 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSE-----GE 473

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  VS+ G L+T G
Sbjct: 474 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 531

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 532 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 587

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 588 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 645

Query: 268 DVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 646 ATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 702

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KV  LDGV + QI+AG  HS   T 
Sbjct: 703 KP-KKVIGLDGVAIQQISAGTSHSLAWTA 730



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 168/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ L+    P   +    QQVV              V + G G+ G+LG G   D  
Sbjct: 3997 EAGRNILVPTLAPSFSQA---QQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDD-- 4051

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4052 ---LHVLTVISALQGFVVTQMVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4103

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LF+ G+G +G+LG G+  +   
Sbjct: 4104 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKL 4161

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +VS+     V Q+ACG+ H+L +  D  G  V+ FG G  G+LG+     +S   PQ 
Sbjct: 4162 PERVSALEGHQVGQVACGLNHTLAVSAD--GMTVWAFGDGDYGKLGLGNSTAKSS--PQK 4217

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +G++YT+G+            + N PQ +P  + + 
Sbjct: 4218 VDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVF 4277

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L+  G+V   G +  G L          P       +S L G  + Q
Sbjct: 4278 IEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREP-----TLISALQGKNIQQ 4332

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4333 ISAGRCHSAAWTA 4345



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 165/386 (42%), Gaps = 58/386 (15%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + L P L    S S    + CG      + +      G V 
Sbjct: 3984 VFLWGAGRHGQLAEAGR--NILVPTLA--PSFSQAQQVVCGQNCTFVIQA-----NGTVS 4034

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFSFGNGDYGRL 4151

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNS 265
            G+     +   LP+    L   ++  ++   + + A+SA+G +  W          G  +
Sbjct: 4152 GLGNTSNKK--LPERVSALEGHQVGQVACGLNHTLAVSADG-MTVWAFGDGDYGKLGLGN 4208

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            ++  + PQ +     +   + A G    + LT DG V   G      L +    +  RP 
Sbjct: 4209 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRP- 4267

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                ++V  L GV +  +A GAEH+  ++                              +
Sbjct: 4268 ----QQVPALTGVFIEDVAVGAEHTLTLSSTGD--------------------------V 4297

Query: 384  MTWGWGEHGQLGLGNTCDQIHPKVVN 409
              WG    GQLGLG+T     P +++
Sbjct: 4298 YAWGSNSEGQLGLGHTNHVREPTLIS 4323



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 151/373 (40%), Gaps = 64/373 (17%)

Query: 84  SPSSVIGGK---------VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           SP S+  G+         V+ WG  SS QL  G     L PK    F   +     I AG
Sbjct: 351 SPDSIQAGEAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAG 406

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSL 191
              +  +S  G +  CG G++G+LG GD  + S+  K++   ++ + +++       H+L
Sbjct: 407 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTL 466

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAAL 250
               +    +V+ +G G  G+LG      +    P++  G L    +V +SA    SAA+
Sbjct: 467 AFTSE---GEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 521

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLML 303
           S +G LYTWG       G   ++  N P  +    +  + + G +H + L+ DG  V   
Sbjct: 522 SEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSF 581

Query: 304 GGSHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWV 358
           GG  +G L   D  RV   +        V  L G+ + ++ AG++ S  +T     + W 
Sbjct: 582 GGGDNGKLGHGDTNRVYKPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 634

Query: 359 RLFII----SYTPFFPPFFINVIAENRA------------------IMTWGWGEHGQLGL 396
               +    S      P  I  +A  R                   +  WG    GQ G 
Sbjct: 635 CGACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 694

Query: 397 GNTCDQI-HPKVV 408
           GN+   I  PK V
Sbjct: 695 GNSTGPITKPKKV 707



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 18/233 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G  +    P L+    +S+V  ++CG +H +AL+      G  V+
Sbjct: 526 ELYTWGEGDFGRLGHGDSNSRNIPTLVK--DISNVGEVSCGSSHTIALSKD----GRTVW 579

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G G +G+LGHG+      PK V    G    I  + AG   S  ++ +G ++  G G 
Sbjct: 580 SFGGGDNGKLGHGDTNRVYKPKVVEALQG--MFIRKVCAGSQSSLALTSTGQVYAWGCGA 637

Query: 155 FGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              LG G   + +  P  +       V  I+ G  H L L  D   N+VY +G+   GQ 
Sbjct: 638 C--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHD---NEVYAWGNNSMGQC 692

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS---AALSAEGHLYTWGRGF 263
           G   +    ++ P+  IGL  + I  ISA    S    AL  +  +  W R +
Sbjct: 693 G-QGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 744



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 37/305 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G    +  P+L+       V +    G    A  S      G+++
Sbjct: 473 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED----GELY 528

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGDG 153
           +WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G G
Sbjct: 529 TWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGGG 584

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G+LGHGD      P  V +     + ++  G + SL L       QVY +G G    L
Sbjct: 585 DNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--ACL 639

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NST 266
           G       ++  P++   L    +V IS       ALS +  +Y WG          NST
Sbjct: 640 GCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 698

Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             +  P+ +     ++  Q + G +H L  T              +  D + V+  RP  
Sbjct: 699 GPITKPKKVIGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPYC 745

Query: 325 VALEK 329
           V LE+
Sbjct: 746 VDLEE 750



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  VF WG G  GQL   G   +V  L P   +F    +     +  G N +  +  
Sbjct: 3978 LGGKCDVFLWGAGRHGQLAEAGRNILVPTLAP---SFSQAQQ-----VVCGQNCTFVIQA 4029

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4030 NGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTE---SG 4086

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4087 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4122

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4123 -----------------------QMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNK 4159

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+VS L+G +V Q+A G  H+  V+                         A+
Sbjct: 4160 KLP-----ERVSALEGHQVGQVACGLNHTLAVS-------------------------AD 4189

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4190 GMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4241


>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
          Length = 1207

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 155/321 (48%), Gaps = 26/321 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++S G+   GQLG    + +   SP L+ L        ++CG  H LAL     +  G+V
Sbjct: 120 IYSMGSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLAL-----MRDGEV 174

Query: 94  FSWGRGSSGQLGHG----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           +SWG   +GQ G G      V    PK V F D  R  I  I +G  HSGFV + G LF 
Sbjct: 175 YSWGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRLFM 234

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG G  GQLG+  Y+   SP  +S    K + ++ACG  H++VL ++    ++Y  GS  
Sbjct: 235 CGKGDQGQLGNMSYQDELSPFYISKIPEK-IQEVACGDDHTVVLTRNG---EIYTMGSNS 290

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
           RGQLG      R  ++P +   L+ I +  I A G  SA+LS +  LY WG G  +  + 
Sbjct: 291 RGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRA-GQFSASLSVDNQLYLWGCG--TFGEF 347

Query: 270 NCPQSLPS--SLSFSQAALGWNHVL-VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
             P  + S  +L  +   LG +  L VLT  G V   G +  G L   + +  + P    
Sbjct: 348 FTPHRVKSVQNLELADFQLGKSGFLTVLTRQGSVYTWGINDMGQLGLRDSIQRSTP---- 403

Query: 327 LEKVSNLDGVKVIQIAAGAEH 347
             +V  LDG +V QI  G ++
Sbjct: 404 -HRVEALDGKRVTQITCGRDY 423



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 174/394 (44%), Gaps = 61/394 (15%)

Query: 83  TSPSSVIGG---KVFSWGRGSSGQLGHGEMVDA-----LYPKPVTFFDGHRYTITHISAG 134
           ++ S V GG   +VFSWG    GQLG G+ + +     + P+    F  +   IT +S G
Sbjct: 52  SNKSQVQGGDYTEVFSWGSDKFGQLGLGKQISSQKQFHMVPR----FCSYNIPITQVSCG 107

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            +HS F++ S  +++ G    GQLG  D   +  SSPV V   VN    QI+CG  H+L 
Sbjct: 108 TSHSVFITSSQLIYSMGSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLA 167

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS--LPQVTIGLHDIE---IVGISANGDRS 247
           L++D    +VY +GS + GQ G       +V    P++ +   D +   I  I +    S
Sbjct: 168 LMRDG---EVYSWGSNENGQCGSGASPFHTVVQWAPKI-VKFDDYQRPFIKQIDSGAFHS 223

Query: 248 AALSAEGHLYTWGRGFN------STSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDG 298
             +   G L+  G+G        S  D   P     +P  +   + A G +H +VLT +G
Sbjct: 224 GFVDEIGRLFMCGKGDQGQLGNMSYQDELSPFYISKIPEKI--QEVACGDDHTVVLTRNG 281

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
           E+  +G +  G L      S    + V L++   L+ +++ +I AG + SA ++      
Sbjct: 282 EIYTMGSNSRGQLGTGPSSSRGSNVPVLLQE---LNFIRMTRIRAG-QFSASLSVDNQLY 337

Query: 359 RLFIISYTPFFPPF-------------------FINVIAENRAIMTWGWGEHGQLGLGNT 399
                ++  FF P                    F+ V+    ++ TWG  + GQLGL ++
Sbjct: 338 LWGCGTFGEFFTPHRVKSVQNLELADFQLGKSGFLTVLTRQGSVYTWGINDMGQLGLRDS 397

Query: 400 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
             +  P  V   D    R TQ  + CG  +  A+
Sbjct: 398 IQRSTPHRVEALDG--KRVTQ--ITCGRDYVIAL 427



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 21/220 (9%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIG 90
           ++ +++  G G  GQLG     DELSP    +S +   +  +ACG  H + LT       
Sbjct: 228 EIGRLFMCGKGDQGQLGNMSYQDELSP--FYISKIPEKIQEVACGDDHTVVLTR-----N 280

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++ G  S GQLG G         PV   + +   +T I AG   S  +S    L+  
Sbjct: 281 GEIYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQ-FSASLSVDNQLYLW 339

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G GTFG+          +P +V S  N  +     G    L +L       VY +G    
Sbjct: 340 GCGTFGEFF--------TPHRVKSVQNLELADFQLGKSGFLTVL--TRQGSVYTWGINDM 389

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           GQLG+ +D I+  S P     L    +  I+   D   AL
Sbjct: 390 GQLGL-RDSIQR-STPHRVEALDGKRVTQITCGRDYVIAL 427



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 36/281 (12%)

Query: 35  KVWSWGAGTDGQLGTGR--LHD--ELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSV 88
           +V+SWG+  +GQ G+G    H   + +P+++         +  +  G  H       S  
Sbjct: 173 EVYSWGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFH-------SGF 225

Query: 89  IG--GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           +   G++F  G+G  GQLG+    D L P    +       I  ++ G +H+  ++ +G 
Sbjct: 226 VDEIGRLFMCGKGDQGQLGNMSYQDELSP---FYISKIPEKIQEVACGDDHTVVLTRNGE 282

Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           ++T G  + GQLG G   S  S  PV +       + +I  G   + +     + NQ+Y 
Sbjct: 283 IYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQFSASL----SVDNQLYL 338

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G  G+   +  R++SV      + L D ++ G S        L+ +G +YTW  G N
Sbjct: 339 WGCGTFGEF-FTPHRVKSVQ----NLELADFQL-GKSG---FLTVLTRQGSVYTW--GIN 387

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLT-GDGEVLMLG 304
               +    S+  S      AL    V  +T G   V+ LG
Sbjct: 388 DMGQLGLRDSIQRSTPHRVEALDGKRVTQITCGRDYVIALG 428


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 161/379 (42%), Gaps = 46/379 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D  SP  L+      +  + CG  H +A +      G +V+S
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 92  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
                R V     + G   + +V        S + S   + Y W +    G     D   
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  L + S SF SQ + GW H + LT DG++   G +  G +     +    P+ V    
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 355

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  PK++
Sbjct: 356 TNGQLGIGESVDRNFPKII 374



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 166/377 (44%), Gaps = 56/377 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DGH+  I
Sbjct: 17  VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 69

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S SG  +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 70  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +    +  +V  +G  + GQLG+       V  PQ       I I  ++A  + +
Sbjct: 130 SHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIPIKMVAAGAEHT 184

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
           AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++  G 
Sbjct: 185 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      K+  L    + QI+ G  H+  +T       
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALT------- 292

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                               +  +  WGW + GQ+G+GN  DQ  P  V     F +   
Sbjct: 293 -------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQK 329

Query: 420 QLEVFCGSGFTYAISRH 436
            ++V CG   T A++  
Sbjct: 330 VVQVSCGWRHTLAVTER 346



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTED-----GDLY 194

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT   G + ++  ++ GW H+  VS SG L+T G   
Sbjct: 195 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD   H  P K+ +  N  + QI+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           V  + +   S  QV     D ++V +S     + A++   +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 24/302 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + 
Sbjct: 84  QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G+  D+L P+ +  F+G    I  ++AG  H+  V++ G L+  
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEG--IPIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P +V+S   + +  +ACG RH++ +        +Y +G  K 
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG     +    +P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309

Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N  Q  P  + F       Q + GW H L +T    V   G   +G L   E V   
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369

Query: 321 RP 322
            P
Sbjct: 370 FP 371


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
           (Silurana) tropicalis]
          Length = 4842

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 161/329 (48%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  +    + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDGV + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 157/334 (47%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 4029 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4080

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 4081 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKL 4136

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++    ++ Q+ACG+ H+L +  D  G+ V+ FG 
Sbjct: 4137 FTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSAD--GSLVWAFGD 4194

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 4195 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4252

Query: 264  --NSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  L       A+G  H L L+  GEV   G +  G L        
Sbjct: 4253 PEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHV 4312

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              P       V+ L G  + QI+AG  HSA  T 
Sbjct: 4313 REP-----TLVTALQGKNIRQISAGRCHSAAWTA 4341



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 117/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +T+      GK+F
Sbjct: 4083 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA-----DGKLF 4137

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ VT  +G    I  ++ G NH+  VS  G L +  GDG
Sbjct: 4138 TFGNGDYGRLGLGNTSNKKLPERVTALEG--LHIGQVACGLNHTLAVSADGSLVWAFGDG 4195

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 4196 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4250

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ+   L  I I  I+   + + ALSA G +Y WG
Sbjct: 4251 GLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWG 4297



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 57/362 (15%)

Query: 89   IGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
            +GGK  VF WG G  GQL      + + P     F   +  I     G N +  +  +G 
Sbjct: 3974 LGGKCDVFLWGAGRHGQLAEAGR-NVMIPSGAGSFSQAQQVI----CGQNCTFVIQANGT 4028

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGNQVY 203
            +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     +V+
Sbjct: 4029 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SGEVF 4085

Query: 204  GFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
             +G G  G+LG  + DR R    P+    L   E+V +S     SA ++A+G L+T+G G
Sbjct: 4086 SWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4142

Query: 263  ------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL-MLGGSHHGMLSD 313
                    +TS+   P+ + +   L   Q A G NH L ++ DG ++   G   +G L  
Sbjct: 4143 DYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGL 4202

Query: 314  PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV-----RLFII----- 363
                + + P     +KV  L G+ + ++A G + S  +T   H       RL  +     
Sbjct: 4203 GNSTAKSSP-----QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4257

Query: 364  ------SYTPFFPPFFINVIA----------ENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
                     P     FI+ IA           +  +  WG    GQLGLG+T     P +
Sbjct: 4258 RNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTL 4317

Query: 408  VN 409
            V 
Sbjct: 4318 VT 4319



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 147/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        V  L G+   ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+  +    V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  V +       ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 11/218 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            K++++G G  G+LG G   ++  P+ +       +  +ACG  H LA+    S  G  V+
Sbjct: 4135 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAV----SADGSLVW 4190

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            ++G G  G+LG G       P+ V    G    I  ++ G   S  ++  G ++T G   
Sbjct: 4191 AFGDGDYGKLGLGNSTAKSSPQKVDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4248

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
               L  G  R+H+ P  V   +   +  IA G  H+L L       +VY +GS   GQLG
Sbjct: 4249 LIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLAL---SASGEVYAWGSNSEGQLG 4305

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +       V  P +   L    I  ISA    SAA +A
Sbjct: 4306 LG--HTNHVREPTLVTALQGKNIRQISAGRCHSAAWTA 4341



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 62/151 (41%), Gaps = 47/151 (31%)

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H + LT  GEV   G   +G L         RP      ++  L G +V+Q++ G +HSA
Sbjct: 4074 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4128

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            VVT                           +  + T+G G++G+LGLGNT ++  P+   
Sbjct: 4129 VVTA--------------------------DGKLFTFGNGDYGRLGLGNTSNKKLPE--- 4159

Query: 410  LGDEFQNRDTQLE------VFCGSGFTYAIS 434
                   R T LE      V CG   T A+S
Sbjct: 4160 -------RVTALEGLHIGQVACGLNHTLAVS 4183



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 57/317 (17%)

Query: 112 ALYPKPVTFFD-----GHRYTITHISAGWNHSG---FVSDSGCLFTCGDGTFGQLGHGDY 163
           +LY   +  F+        Y+ T  S     SG    VS++  ++  G  +  QL  G  
Sbjct: 331 SLYEAALCLFEEVCQMASDYSRTCASPDSIQSGENPVVSETCEVYVWGSNSSHQLVEGTQ 390

Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
                P     F   +   I  G   + V+  D     V   G G  G+LG+     +S 
Sbjct: 391 EKILQPKLAPCF--SDAQTIEAGQYCTFVISTD---GSVRACGKGSYGRLGLGDSNNQS- 444

Query: 224 SLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           +L ++T   H  I+ V  S   D  + A + EG +++WG G        ++S    P+ +
Sbjct: 445 TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLI 504

Query: 276 PSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
             +L        + G+ H   +T DGE+   G    G L   +  S++R +   ++ +SN
Sbjct: 505 QGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--SNSRNIPTLVKDISN 562

Query: 333 LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHG 392
                V +++ G+ H+                         I +  + R + ++G G++G
Sbjct: 563 -----VGEVSCGSSHT-------------------------IALSKDGRTVWSFGGGDNG 592

Query: 393 QLGLGNTCDQIHPKVVN 409
           +LG G+T     PKVV 
Sbjct: 593 KLGHGDTNRVYKPKVVE 609


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 170/381 (44%), Gaps = 50/381 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D   P  L+      +  +ACG  H LA +   +    +++S
Sbjct: 35  VCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRN----ELYS 90

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D L P+P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 91  WGWGDFGRLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 148

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G+      P K+ +F    +  +A G  HS+ + ++    ++YG+G G+ G LG+
Sbjct: 149 GQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 205

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R    P+    +   ++V ++     + ++S+ G +YT+G       G  +  D 
Sbjct: 206 GDRNDRWN--PEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDS 263

Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             PQ L   S    SQ + GW H + LT  G +   G +  G +   + +    P+ V  
Sbjct: 264 LVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKF 323

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +       +V+QI+ G  H+  VT                          E   + +WG
Sbjct: 324 PQDQ-----RVVQISCGWRHTIAVT--------------------------EKENVFSWG 352

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG G+T D+  PK++
Sbjct: 353 RGTNGQLGHGDTIDRNSPKII 373



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 140/299 (46%), Gaps = 26/299 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG G  G+LG G   D L PQ ++ L  L  +  +ACG +H LA+T     + G+V
Sbjct: 87  ELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLR-IKQIACGDSHCLAVT-----MEGEV 140

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            SWGR  +GQLG G   D+L P+ +  F G    I  ++AG  HS  ++++G L+  G G
Sbjct: 141 QSWGRNQNGQLGLGNTEDSLVPQKIQAFKG--VPIKMVAAGAEHSVAITENGELYGWGWG 198

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G LG GD     +P KVSS     +  +ACG RH++ +        +Y +G  K GQL
Sbjct: 199 RYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSS---GGIYTYGWSKYGQL 255

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G          +PQ    L D  I  +S     S AL++ G L+ W  G+N    V    
Sbjct: 256 G--HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGW--GWNKFGQVGVGD 311

Query: 274 SL----------PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           +L          P      Q + GW H + +T    V   G   +G L   + +    P
Sbjct: 312 NLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSP 370



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 146/339 (43%), Gaps = 47/339 (13%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           ISAG +H+  +     + + G G  GQLGHGD      P ++S+   +++  IACG  H+
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHT 78

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           L   +    N++Y +G G  G+LG        + +PQ  I L  + I  I+       A+
Sbjct: 79  LAYSES--RNELYSWGWGDFGRLGHGNS--SDLLIPQPIIALQGLRIKQIACGDSHCLAV 134

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
           + EG + +WGR      G  +T D   PQ + +   +     A G  H + +T +GE+  
Sbjct: 135 TMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYG 194

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK-----FHW 357
            G   +G L   +R     P     EKVS++D  K++ +A G  H+  V+       + W
Sbjct: 195 WGWGRYGNLGLGDRNDRWNP-----EKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGW 249

Query: 358 VRLFIISYTPF---FPPFFINVIAENRA------------------IMTWGWGEHGQLGL 396
            +   + +  F     P  +  +++                     +  WGW + GQ+G+
Sbjct: 250 SKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGV 309

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G+  D   P  V    +F      +++ CG   T A++ 
Sbjct: 310 GDNLDHCSPVQV----KFPQDQRVVQISCGWRHTIAVTE 344


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 4046 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4097

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 4098 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKL 4153

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++     + Q+ACG+ H+L +  D  G+ V+ FG 
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGD 4211

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 4212 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4269

Query: 264  --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  + +     A+G  H L L   G+V   G +  G L        
Sbjct: 4270 PEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 4329

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              P  V +     L G  + QI+AG  HSA  T 
Sbjct: 4330 REPTLVTV-----LQGKNIRQISAGRCHSAAWTA 4358



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +TS      GK+F
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----DGKLF 4154

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ VT  +G  Y I  ++ G NH+  VS  G + +  GDG
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4212

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 4213 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4267

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ    L  + I  ++   + + AL++ G +Y WG
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4311

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       +LS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3991 LGGKCDVYLWGAGRHGQLAEAGRNVMVPATAP---SFSQAQQ-----VICGQNCTFVIQA 4042

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4099

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4135

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4136 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4172

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4173 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4202

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4203 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4254



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 4046 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4097

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 4098 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKL 4153

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++     + Q+ACG+ H+L +  D  G+ V+ FG 
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGD 4211

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 4212 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4269

Query: 264  --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  + +     A+G  H L L   G+V   G +  G L        
Sbjct: 4270 PEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 4329

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              P  V +     L G  + QI+AG  HSA  T 
Sbjct: 4330 REPTLVTV-----LQGKNIRQISAGRCHSAAWTA 4358



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +TS      GK+F
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----DGKLF 4154

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ VT  +G  Y I  ++ G NH+  VS  G + +  GDG
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4212

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 4213 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4267

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ    L  + I  ++   + + AL++ G +Y WG
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4311

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       +LS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3991 LGGKCDVYLWGAGRHGQLAEAGRNVMVPATAP---SFSQAQQ-----VICGQNCTFVIQA 4042

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4099

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4135

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4136 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4172

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4173 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4202

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4203 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4254



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 4046 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4097

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 4098 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKL 4153

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++     + Q+ACG+ H+L +  D  G+ V+ FG 
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGD 4211

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 4212 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4269

Query: 264  --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  + +     A+G  H L L   G+V   G +  G L        
Sbjct: 4270 PEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 4329

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              P  V +     L G  + QI+AG  HSA  T 
Sbjct: 4330 REPTLVTV-----LQGKNIRQISAGRCHSAAWTA 4358



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +TS      GK+F
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----DGKLF 4154

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ VT  +G  Y I  ++ G NH+  VS  G + +  GDG
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4212

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 4213 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4267

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ    L  + I  ++   + + AL++ G +Y WG
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4311

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       +LS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3991 LGGKCDVYLWGAGRHGQLAEAGRNVMVPATAP---SFSQAQQ-----VICGQNCTFVIQA 4042

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4099

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4135

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4136 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4172

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4173 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4202

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4203 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4254



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 171/389 (43%), Gaps = 58/389 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            + +WG    GQLG G   D   P  + L + ++V+ +A G  H +ALTS      G V 
Sbjct: 55  AILAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTS-----AGTVL 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGR + GQLG+G    +  P  V+   G R  I  ++ G +HS  ++ +G L   G   
Sbjct: 110 AWGRNTEGQLGNGTTTSSGEPVAVSLPSGIR--IVAVAVGADHSLALTSTGSLLAWGSND 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   S S+PV V    N  V  IA G  H+LVL        +  +G+ + GQLG
Sbjct: 168 TGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPA-ALLAWGANREGQLG 226

Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
               V + R   V+LP        + +  I+   D S AL+++  +  WG       G  
Sbjct: 227 DGTVVDRSRPVPVNLPT------GLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDG 280

Query: 265 STSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           +T+    P +  LP     +  A G  H L LT DG  L  GG+H G L +     S+ P
Sbjct: 281 TTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEP 340

Query: 323 LSVALEKVSNLDGVKVIQIAA-GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           ++V+L       G ++I IA+  ++H+  +T +                           
Sbjct: 341 VAVSLPG-----GTRLISIASRDSDHNVAITTEG-------------------------- 369

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
           A + WG    G LG G T D   P  V+L
Sbjct: 370 AALAWGLNSQGHLGDGTTTDSATPVAVSL 398



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 117/269 (43%), Gaps = 25/269 (9%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG+   GQLG G +    +P  + L   ++V+ +A G  H L LT+        + +WG
Sbjct: 162 AWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPA---ALLAWG 218

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
               GQLG G +VD   P PV    G   T+T I+ G +HS  ++    +   G  + GQ
Sbjct: 219 ANREGQLGDGTVVDRSRPVPVNLPTG--LTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQ 276

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G       PV V   V      IA G  HSL L  D        +G    GQLG   
Sbjct: 277 LGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSD---GTALAWGGNHWGQLGNGS 333

Query: 218 DRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
               S    VSLP    G   I I   S + D + A++ EG    WG       G  +T+
Sbjct: 334 TSDSSEPVAVSLPG---GTRLISIA--SRDSDHNVAITTEGAALAWGLNSQGHLGDGTTT 388

Query: 268 DVNCPQ--SLPSSLSFSQAALGWNHVLVL 294
           D   P   SLP+  + +  A+G +H L L
Sbjct: 389 DSATPVAVSLPAGAALTSIAVGDDHSLAL 417



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 110/281 (39%), Gaps = 54/281 (19%)

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           S  +   G    GQLG G     S P+ V       V  +A G RHS+ L        V 
Sbjct: 53  SDAILAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTS---AGTVL 109

Query: 204 GFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +G    GQLG     S     +VSLP        I IV ++   D S AL++ G L  W
Sbjct: 110 AWGRNTEGQLGNGTTTSSGEPVAVSLPS------GIRIVAVAVGADHSLALTSTGSLLAW 163

Query: 260 GR------GFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLML--GGSHHG 309
           G       G  S +  + P +  LP + + +  A G +H LVLT  G   +L  G +  G
Sbjct: 164 GSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREG 223

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L D   V  +RP+ V L       G+ V  IA G +HS  +T                 
Sbjct: 224 QLGDGTVVDRSRPVPVNLPT-----GLTVTAIAGGRDHSLALT----------------- 261

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                     +  ++ WG   HGQLG G T   + P  V L
Sbjct: 262 ---------SDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVL 293



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 6/159 (3%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG  + GQLG G     L P  + L   +  + +A G  H LALTS      G   
Sbjct: 265 TVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTS-----DGTAL 319

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG+G   D+  P  V+   G R  I+  S   +H+  ++  G     G  +
Sbjct: 320 AWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRL-ISIASRDSDHNVAITTEGAALAWGLNS 378

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
            G LG G     ++PV VS      +  IA G  HSL L
Sbjct: 379 QGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDHSLAL 417


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Cricetulus griseus]
          Length = 4859

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 4046 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4097

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 4098 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKL 4153

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++     + Q+ACG+ H+L +  D  G+ V+ FG 
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGD 4211

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 4212 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4269

Query: 264  --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  + +     A+G  H L L   G+V   G +  G L        
Sbjct: 4270 PEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 4329

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              P  V +     L G  + QI+AG  HSA  T 
Sbjct: 4330 REPTLVTV-----LQGKNIRQISAGRCHSAAWTA 4358



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +TS      GK+F
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----DGKLF 4154

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ VT  +G  Y I  ++ G NH+  VS  G + +  GDG
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4212

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 4213 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4267

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ    L  + I  ++   + + AL++ G +Y WG
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4311

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4312 AWGSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       +LS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3991 LGGKCDVYLWGAGRHGQLAEAGRNVMVPATAP---SFSQAQQ-----VICGQNCTFVIQA 4042

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4099

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4135

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4136 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4172

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4173 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4202

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4203 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4254



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 4057 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4108

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 4109 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKL 4164

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++     + Q+ACG+ H+L +  D  G+ V+ FG 
Sbjct: 4165 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGD 4222

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 4223 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4280

Query: 264  --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  + +     A+G  H L L   G+V   G +  G L        
Sbjct: 4281 PEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 4340

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              P  V +     L G  + QI+AG  HSA  T 
Sbjct: 4341 REPTLVTV-----LQGKNIRQISAGRCHSAAWTA 4369



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +TS      GK+F
Sbjct: 4111 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----DGKLF 4165

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ VT  +G  Y I  ++ G NH+  VS  G + +  GDG
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4223

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 4224 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4278

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ    L  + I  ++   + + AL++ G +Y WG
Sbjct: 4279 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4325



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 4008 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4058

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4059 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4175

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4176 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4234 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4291

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4292 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4322

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4323 AWGSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       +LS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 4002 LGGKCDVYLWGAGRHGQLAEAGRNVMVPATAP---SFSQAQQ-----VICGQNCTFVIQA 4053

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4110

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4111 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4146

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4147 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4183

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4184 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4213

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4214 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4265



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 60/387 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V +WG G DGQLG G   D LSP +L+ L  L  +S++ CG  H +A +   +     V+
Sbjct: 35  VCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVI-CGADHTIAYSESHT----DVY 89

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG G  G+LGHG   D   P+P+     H   I  I+ G +H   V+  G + + G   
Sbjct: 90  SWGWGDFGRLGHGNSSDLFTPQPIRQL--HGLKIKQIACGDSHCLAVTMEGQVQSWGRNQ 147

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G       P K+ +F    +  +A G  H+  + +D    ++YG+G G+ G LG
Sbjct: 148 NGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTED---GELYGWGWGRYGNLG 204

Query: 215 V--SKDRI--RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
           +   KDR+    VSLP      H  ++V ++     + ++S+ G LYT+G       G  
Sbjct: 205 LGDRKDRLVPEKVSLP------HGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHG 258

Query: 265 STSDVNCPQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +D   P  L +   SF SQ + GW H + +T DG++   G +  G +   + V  + P
Sbjct: 259 DYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSP 318

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           + V L         KVI I+ G  H+  VT                          E + 
Sbjct: 319 VQVKLPLEQ-----KVILISCGWRHTLAVT--------------------------ERQN 347

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           + +WG G +GQLG G   D+  P ++ 
Sbjct: 348 VFSWGRGTNGQLGNGECTDRNVPVIIK 374



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 18/244 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G+++
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTED-----GELY 193

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V+   G +  +  ++ GW H+  VS SG L+T G   
Sbjct: 194 GWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVM--VACGWRHTISVSSSGGLYTYGWSK 251

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGDY  H  P ++ +     + QI+ G RH++ +  D    ++YG+G  K GQ+G
Sbjct: 252 YGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSD---GKLYGWGWNKFGQVG 308

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
           V  +  RS S  QV + L   +++ IS     + A++   ++++WGRG N        +D
Sbjct: 309 VGDNVDRS-SPVQVKLPLEQ-KVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTD 366

Query: 269 VNCP 272
            N P
Sbjct: 367 RNVP 370



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 164/379 (43%), Gaps = 60/379 (15%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V +WGRG  GQLGHG+  D L P  ++  +G    I
Sbjct: 16  VLLISAGASHSVALLS-----GNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEG--LEI 68

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             +  G +H+   S+S   +++ G G FG+LGHG+     +P  +       + QIACG 
Sbjct: 69  ISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGD 128

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H L +  +    QV  +G  + GQLG+  ++D +    +PQ       + I  ++A  +
Sbjct: 129 SHCLAVTME---GQVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFQGVPIKMVAAGAE 181

Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGD 297
            +AA++ +G LY WG       G     D   P+  SLP        A GW H + ++  
Sbjct: 182 HTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSS 241

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           G +   G S +G L   +      P      ++  L G  + QI+ G  H+  VT     
Sbjct: 242 GGLYTYGWSKYGQLGHGDYADHLIP-----HQLEALQGSFISQISGGWRHTMAVT----- 291

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                                 +  +  WGW + GQ+G+G+  D+  P  V L  E    
Sbjct: 292 ---------------------SDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLE---- 326

Query: 418 DTQLEVFCGSGFTYAISRH 436
              + + CG   T A++  
Sbjct: 327 QKVILISCGWRHTLAVTER 345



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 55/269 (20%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDI 235
           + V  I+ G  HS+ LL    GN V  +G G+ GQLG   ++DR+     P +   L  +
Sbjct: 14  RRVLLISAGASHSVALLS---GNVVCTWGRGEDGQLGHGDAQDRLS----PTILSTLEGL 66

Query: 236 EIVGISANGDRSAALSAEGH--LYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAA 285
           EI+ +    D + A S E H  +Y+WG       G  ++SD+  PQ +     L   Q A
Sbjct: 67  EIISVICGADHTIAYS-ESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIA 125

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
            G +H L +T +G+V   G + +G L        T   S+  +K+    GV +  +AAGA
Sbjct: 126 CGDSHCLAVTMEGQVQSWGRNQNGQLG-----LGTTEDSLVPQKIQAFQGVPIKMVAAGA 180

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
           EH+A VT                          E+  +  WGWG +G LGLG+  D++ P
Sbjct: 181 EHTAAVT--------------------------EDGELYGWGWGRYGNLGLGDRKDRLVP 214

Query: 406 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           + V+L     + +  + V CG   T ++S
Sbjct: 215 EKVSL----PHGEKMVMVACGWRHTISVS 239


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
           guttata]
          Length = 4864

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V   +  NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDII--NVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KV  LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVGGLDGIAIQQISAGTSHSLAWTA 735



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ +I  A P        QQVV              V + G G+ G+LG G   D  
Sbjct: 4015 EAGRNVMIPAAAPSFSPA---QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4069

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4070 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4121

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4122 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 4179

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H++ +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4180 PERVTALEGYQIGQVACGLNHTVAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4235

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4236 VDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVF 4295

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L+  G+V   G +  G L          P  V +     L G  V Q
Sbjct: 4296 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4350

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4351 ISAGRCHSAAWTA 4363



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 164/386 (42%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 4002 VYLWGAGRHGQLAEAGR--NVMIPA--AAPSFSPAQQVVCGQNCTFVIQA-----NGTVL 4052

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4053 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4169

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+S +G +        +G+ G  ++
Sbjct: 4170 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4227

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4228 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQ 4287

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
            V L     L GV +  IA GAEH+  ++                              + 
Sbjct: 4288 VPL-----LAGVFIEDIAVGAEHTLALSSTGD--------------------------VY 4316

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4317 AWGSNSEGQLGLGHTNHVREPTLVTV 4342



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 29/274 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK  + F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +   ++  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +        +  L G+ + ++ AG++ S  +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDI----INVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVGGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 142/356 (39%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   M+ A  P   +F    +     +  G N +  +  
Sbjct: 3996 LGGKCDVYLWGAGRHGQLAEAGRNVMIPAAAP---SFSPAQQ-----VVCGQNCTFVIQA 4047

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4104

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4105 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4140

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4141 -----------------------QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK 4177

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                          +
Sbjct: 4178 KLP-----ERVTALEGYQIGQVACGLNHTVAVS-------------------------TD 4207

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4208 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIK----KVACGTQFSVALTK 4259



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P   SSF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S   P  V        D + V +++ G+ H+                    
Sbjct: 541 GRLGHGDSNSRNIPTLVK-------DIINVGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 167/344 (48%), Gaps = 32/344 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G   ++   + LN  +   + SVS       H LALT     + GK
Sbjct: 416 VHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALT-----LDGK 470

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWG G  G+LGHG       PK V    G++  +  I+AG+ HS  V++ G L+T G+
Sbjct: 471 VYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNK-VVCCIAAGYRHSAAVTEDGELYTWGE 529

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +G+LGHGD  S + PV+V      NV Q+ACG  H++ + +D  G  V+ FGSG  G+
Sbjct: 530 GDYGRLGHGDNNSRNVPVQVKDVA--NVGQVACGSAHTVCVSQD--GQTVWSFGSGDNGK 585

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-STSDVNC 271
           LG S      V  P+V   L  + I  +      S AL++ G +Y WG G +  T  V+ 
Sbjct: 586 LGHSD--TNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDA 643

Query: 272 PQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
             + P  L      S    ++G +H + LT D  V   G +  G          T P++ 
Sbjct: 644 TSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGH---CTTPITK 700

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTG------KFHWVRLFII 363
             +KV  LDGV V QI+AG  H+   T          W R + +
Sbjct: 701 P-KKVLGLDGVAVHQISAGTSHTVAWTALPMDRQVVSWYRAYCV 743



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 124/275 (45%), Gaps = 31/275 (11%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G M   L PK  T F   +     I AG   +  +   G +  CG
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQ----QIEAGQYCTFVIFPDGFVHACG 420

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNV----HQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G++G+LG GD  ++ + +K  +F N+ +            H+L L  D    +VY +G 
Sbjct: 421 KGSYGRLGLGD-STNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLD---GKVYSWGD 476

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR----- 261
           G  G+LG    + + +  P++  G    ++V   A G R SAA++ +G LYTWG      
Sbjct: 477 GDYGKLGHGNSQTQKI--PKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGR 534

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERV 317
            G    +  N P  +    +  Q A G  H + ++ DG+ V   G   +G L  SD  RV
Sbjct: 535 LGHGDNNSRNVPVQVKDVANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRV 594

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
              +        +  L G+ + ++  G++ S  +T
Sbjct: 595 YKPK-------VIEALQGMVIRKVCCGSQCSLALT 622



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 19/229 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           KV+SWG G  G+LG G    +  P+L+   +L +  V  +A G  H  A+T       G+
Sbjct: 470 KVYSWGDGDYGKLGHGNSQTQKIPKLVE-GALGNKVVCCIAAGYRHSAAVTE-----DGE 523

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCG 151
           +++WG G  G+LGHG+      P  V         +  ++ G  H+  VS  G  +++ G
Sbjct: 524 LYTWGEGDYGRLGHGDNNSRNVPVQVK----DVANVGQVACGSAHTVCVSQDGQTVWSFG 579

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G  G+LGH D      P  + +     + ++ CG + SL L       QVY +G G   
Sbjct: 580 SGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTST---GQVYVWGCGP-- 634

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            LG       S + P++ + L    +V IS       AL+ + ++Y WG
Sbjct: 635 SLGTGSVDATSAT-PKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWG 682



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 115/302 (38%), Gaps = 59/302 (19%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           ++  G  +  QL  G       P   +SF   +  QI  G   + V+  D     V+  G
Sbjct: 366 VYVWGSNSSHQLAEGSMDKILVPKLATSF--GSAQQIEAGQYCTFVIFPDGF---VHACG 420

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-----RSAALSAEGHLYTWGR 261
            G  G+LG+  D      L ++     D E +  S +        + AL+ +G +Y+WG 
Sbjct: 421 KGSYGRLGLG-DSTNQTQLKRLNF---DNECLVKSVSSSKGSDGHTLALTLDGKVYSWGD 476

Query: 262 G------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
           G        ++     P+ +  +L        A G+ H   +T DGE+   G   +G L 
Sbjct: 477 GDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLG 536

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             +  S   P+ V        D   V Q+A G+ H+  V+                    
Sbjct: 537 HGDNNSRNVPVQVK-------DVANVGQVACGSAHTVCVS-------------------- 569

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                 + + + ++G G++G+LG  +T     PKV+        R    +V CGS  + A
Sbjct: 570 -----QDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIR----KVCCGSQCSLA 620

Query: 433 IS 434
           ++
Sbjct: 621 LT 622


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 171/394 (43%), Gaps = 71/394 (18%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM---------------LACGGAHVLALTS 84
           G G  G+LG G    +L P+ L       VS+               +ACGG H +A+T 
Sbjct: 28  GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTE 87

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G+V SWG G+ GQLG G   D   P  V     HR  +  ++ G+ H+  V+D 
Sbjct: 88  D-----GEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHR--VCGVACGYYHTAVVTDV 140

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G +   G G  GQLG GD+ S   P  VS+  N+ + QIACGM H+L L    +  ++Y 
Sbjct: 141 GLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL---SVNGEIYS 197

Query: 205 FGSGKRGQLGVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWGR 261
           +G+G  GQLGV K  +    V+ PQ  + + + E     A G R   A++ +  L++WG 
Sbjct: 198 WGAGADGQLGVGKHQEETADVATPQ-KVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGL 256

Query: 262 GFNSTSDVNCPQSLPS---------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML- 311
           G +    +   +S  S         +L     A G +H  VL+ +GE+   G   +G L 
Sbjct: 257 GADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLG 316

Query: 312 ---SDPE-RVSSTRPLS--VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
              +DP+  +   R L     L  +  L   K+I+ A G  H+ V               
Sbjct: 317 HGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLV--------------- 361

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
                      I+    +  WG  E GQLG G T
Sbjct: 362 -----------ISTAGEVFAWGAAEDGQLGTGGT 384



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 159/341 (46%), Gaps = 41/341 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG G +GQLG+G   D+  P ++   S   V  +ACG  H   +T       G V 
Sbjct: 90  EVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDV-----GLVM 144

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG+G+SGQLG G+   +L P+ V+    +   I  I+ G  H+  +S +G +++ G G 
Sbjct: 145 CWGKGNSGQLGQGDWTSSLLPRTVSTL--YNEKIRQIACGMAHTLALSVNGEIYSWGAGA 202

Query: 155 FGQLGHGDYRSHS----SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            GQLG G ++  +    +P KV     +    IACG RH + +  DC   +++ +G G  
Sbjct: 203 DGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDC---RLFSWGLGAD 259

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---S 267
           G+LG+     R  S   V   + ++ I  ++A G  +A LS  G ++T GRG        
Sbjct: 260 GRLGLGDSESR-FSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHG 318

Query: 268 DVNCPQSLPSSLSFS-----------------QAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           D +   +L  + +                   +AA G  H LV++  GEV   G +  G 
Sbjct: 319 DADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQ 378

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           L       +  P+     ++++L G+ V  ++ G  HSA V
Sbjct: 379 LGTGGTEGANSPV-----ELTSLRGL-VGDVSCGLVHSAAV 413



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 46/173 (26%)

Query: 273 QSLPSSLSFSQ-----------AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           +  P SLSF+             A G +H + +T DGEV+  G  + G L        T 
Sbjct: 53  KRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTV 112

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P  V       L   +V  +A G  H+AVVT                          +  
Sbjct: 113 PAVV-----KALSNHRVCGVACGYYHTAVVT--------------------------DVG 141

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +M WG G  GQLG G+    + P+ V+      N   + ++ CG   T A+S
Sbjct: 142 LVMCWGKGNSGQLGQGDWTSSLLPRTVST---LYNEKIR-QIACGMAHTLALS 190


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 178/390 (45%), Gaps = 61/390 (15%)

Query: 25  EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           +E E    +V V+S+G G  G+LG G   ++L+P+   +  LS +  +A G  H LALT 
Sbjct: 38  QESETNANLVSVFSFGMGMYGKLGHGDTANQLAPK--KIEGLSDIQAIAAGTNHSLALTK 95

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G V+S+G G  G+LGHG     L PK +         I  I+AG  HS  ++ S
Sbjct: 96  -----SGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLS----DIQAIAAGDFHSLALTKS 146

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G +++ G+GT G LGHG+    S+P K+ S    +V  IA G  HSL L K      VY 
Sbjct: 147 GDVYSFGNGTSG-LGHGNTEDQSTPKKIESL--SDVQAIAAGGNHSLALTK---SGDVYS 200

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           FG G  G+LG       S   P+    L DI+   I+A G+ S AL+  G +Y++G G +
Sbjct: 201 FGFGLFGRLG--HGDTDSQLEPKKIEDLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLH 256

Query: 265 ------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
                  T +   P+ +         A G NH L LT  GEV   G  + G L   +   
Sbjct: 257 GQLGHGDTENQLTPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDD 316

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P          ++G+K IQ        A+  G FH + L                  
Sbjct: 317 QLTP--------KKIEGLKDIQ--------AIAAGDFHSLAL-----------------T 343

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           ++  + ++G G  G LG G+T +Q+ PK +
Sbjct: 344 KSGDVYSFGNGTSG-LGHGDTANQLEPKKI 372



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 148/320 (46%), Gaps = 37/320 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+S+G G  G+LG G    +L P+   +  LS +  +A G  H LALT       G V+S
Sbjct: 99  VYSFGFGLFGRLGHGNTDSQLEPK--KIEGLSDIQAIAAGDFHSLALTK-----SGDVYS 151

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G+SG LGHG   D   PK +         +  I+AG NHS  ++ SG +++ G G F
Sbjct: 152 FGNGTSG-LGHGNTEDQSTPKKIESLS----DVQAIAAGGNHSLALTKSGDVYSFGFGLF 206

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LGHGD  S   P K+      ++  IA G  HSL L K      VY FG G  GQLG 
Sbjct: 207 GRLGHGDTDSQLEPKKIEDL--SDIQAIAAGGNHSLALTK---SGDVYSFGWGLHGQLG- 260

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                 +   P+    L DI+ V   AN   S AL+  G +Y++GR      G   T D 
Sbjct: 261 -HGDTENQLTPKKIEDLSDIQAVAAGAN--HSLALTKSGEVYSFGRGNTGQLGHGDTDDQ 317

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P+ +         A G  H L LT  G+V   G    G L   +  +   P       
Sbjct: 318 LTPKKIEGLKDIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLEP------- 369

Query: 330 VSNLDGVKVIQ-IAAGAEHS 348
              ++G+  IQ IAAGA HS
Sbjct: 370 -KKIEGLTDIQAIAAGANHS 388



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 154/338 (45%), Gaps = 53/338 (15%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           A  LA  S ++     VFS+G G  G+LGHG+  + L PK +         I  I+AG N
Sbjct: 33  ASALAQESETNANLVSVFSFGMGMYGKLGHGDTANQLAPKKIEGLS----DIQAIAAGTN 88

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++ SG +++ G G FG+LGHG+  S   P K+      ++  IA G  HSL L K 
Sbjct: 89  HSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGL--SDIQAIAAGDFHSLALTK- 145

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                VY FG+G     G+        S P+    L D++   I+A G+ S AL+  G +
Sbjct: 146 --SGDVYSFGNGTS---GLGHGNTEDQSTPKKIESLSDVQ--AIAAGGNHSLALTKSGDV 198

Query: 257 YTWGRGF-----NSTSDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGM 310
           Y++G G      +  +D          LS  QA A G NH L LT  G+V   G   HG 
Sbjct: 199 YSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQ 258

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L   +  +   P     +K+ +L  ++   +AAGA HS  +T                  
Sbjct: 259 LGHGDTENQLTP-----KKIEDLSDIQA--VAAGANHSLALT------------------ 293

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                   ++  + ++G G  GQLG G+T DQ+ PK +
Sbjct: 294 --------KSGEVYSFGRGNTGQLGHGDTDDQLTPKKI 323


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
           niloticus]
          Length = 4936

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 161/329 (48%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      ++  VS       H LA T+      G+
Sbjct: 431 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE-----GE 485

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  VS+ G L+T G
Sbjct: 486 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 543

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 544 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 599

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 600 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 657

Query: 268 DVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 658 ATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 714

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KV  LDGV + QI+AG  HS   T 
Sbjct: 715 KP-KKVIGLDGVAIQQISAGTSHSLAWTA 742



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ L+    P   +    QQVV              V + G G+ G+LG G   D  
Sbjct: 4087 EAGRNILVPTIAPSFSQA---QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-- 4141

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4142 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4193

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4194 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 4251

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P KV++    +V Q+ACG+ H+LV+  D  G  V+ FG G  G+LG+     +S   PQ 
Sbjct: 4252 PEKVTALEGYHVGQVACGLNHTLVVSAD--GMMVWAFGDGDYGKLGLGNSTAKSS--PQK 4307

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +G ++T+G+            + N PQ +P  S + 
Sbjct: 4308 VDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIH 4367

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H LVL+  G+V   G +  G L          P       V+ L G  + Q
Sbjct: 4368 IQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREP-----TLVTTLQGKNIHQ 4422

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4423 ISAGRCHSAAWTA 4435



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + L P +    S S    + CG      +        G V 
Sbjct: 4074 VFLWGAGRHGQLAEAGR--NILVPTIA--PSFSQAQQVVCGQNCTFVIQP-----NGTVL 4124

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4125 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4184

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4185 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4241

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L    +  ++   + +  +SA+G +        +G+ G  ++
Sbjct: 4242 GLGNTSNKK--LPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 4299

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG+V   G      L +    +  RP  
Sbjct: 4300 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRP-- 4357

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               ++V  L G+ +  +A GAEH+ V++                              + 
Sbjct: 4358 ---QQVPGLSGIHIQDVAVGAEHTLVLSSTGD--------------------------VY 4388

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
            TWG    GQLGLG+T     P +V 
Sbjct: 4389 TWGSNSEGQLGLGHTNHVREPTLVT 4413



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 147/356 (41%), Gaps = 55/356 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK  + F   +     I AG   +  +S  G +  CG
Sbjct: 380 EVYVWGSNSSHQLVEGTQEKILQPKLASSFADAQT----IEAGQYCTFVISSDGSVRACG 435

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++ + +++       H+L    +    +V+ +G G
Sbjct: 436 KGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 492

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA+S +G LYTWG       
Sbjct: 493 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRL 550

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 551 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 610

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        V  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 611 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 663

Query: 372 FFINVIAENRA------------------IMTWGWGEHGQLGLGNTCDQI-HPKVV 408
             I  +A  R                   +  WG    GQ G GN+   I  PK V
Sbjct: 664 KLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 719



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 18/233 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G  +    P L+    +S+V  ++CG +H +AL+      G  V+
Sbjct: 538 ELYTWGEGDFGRLGHGDSNSRNIPTLVK--DISNVGEVSCGSSHTIALSKD----GRTVW 591

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G G +G+LGHG+      PK V    G    I  + AG   S  ++ +G ++  G G 
Sbjct: 592 SFGGGDNGKLGHGDTNRVYKPKVVEALQG--MFIRKVCAGSQSSLALTSTGQVYAWGCGA 649

Query: 155 FGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              LG G   + +  P  +       V  I+ G  H L L  D   N+VY +G+   GQ 
Sbjct: 650 C--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHD---NEVYAWGNNSMGQC 704

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS---AALSAEGHLYTWGRGF 263
           G   +    ++ P+  IGL  + I  ISA    S    AL  +  +  W R +
Sbjct: 705 G-QGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 756



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 37/305 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G    +  P+L+       V +    G    A  S      G+++
Sbjct: 485 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED----GELY 540

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGDG 153
           +WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G G
Sbjct: 541 TWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGGG 596

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G+LGHGD      P  V +     + ++  G + SL L       QVY +G G    L
Sbjct: 597 DNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--ACL 651

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NST 266
           G       ++  P++   L    +V IS       ALS +  +Y WG          NST
Sbjct: 652 GCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 710

Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             +  P+ +     ++  Q + G +H L  T              +  D + V+  RP  
Sbjct: 711 GPITKPKKVIGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPYC 757

Query: 325 VALEK 329
           V LE+
Sbjct: 758 VDLEE 762



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 140/353 (39%), Gaps = 95/353 (26%)

Query: 89   IGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
            +GGK  VF WG G  GQL      + L P     F   +  +     G N +  +  +G 
Sbjct: 4068 LGGKCDVFLWGAGRHGQLAEAGR-NILVPTIAPSFSQAQQVV----CGQNCTFVIQPNGT 4122

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGNQVY 203
            +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     +V+
Sbjct: 4123 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SGEVF 4179

Query: 204  GFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
             +G G  G+LG  + DR R    P+    L   E+V                        
Sbjct: 4180 SWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV------------------------ 4212

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                                Q + G+ H  V+T DG++   G   +G L      +   P
Sbjct: 4213 --------------------QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP 4252

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                 EKV+ L+G  V Q+A G  H+ VV+                         A+   
Sbjct: 4253 -----EKVTALEGYHVGQVACGLNHTLVVS-------------------------ADGMM 4282

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4283 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4331



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 49/299 (16%)

Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
           D  R  ++  S     +  VS++  ++  G  +  QL  G       P   SSF +    
Sbjct: 356 DYSRTCVSPDSIQTGETPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFAD--AQ 413

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGI 240
            I  G   + V+  D     V   G G  G+LG+     +S +L ++T   H  I+ V  
Sbjct: 414 TIEAGQYCTFVISSD---GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVSS 469

Query: 241 SANGD-RSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNH 290
           S   D  + A + EG +++WG G        ++S    P+ +   L        + G+ H
Sbjct: 470 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH 529

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
              ++ DGE+   G    G L   +  S++R +   ++ +SN     V +++ G+ H+  
Sbjct: 530 SAAVSEDGELYTWGEGDFGRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-- 580

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                  I +  + R + ++G G++G+LG G+T     PKVV 
Sbjct: 581 -----------------------IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVE 616


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 160/324 (49%), Gaps = 28/324 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      ++  VS       H LA T+      G+
Sbjct: 434 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE-----GE 488

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  VS+ G L+T G
Sbjct: 489 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 546

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 547 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 602

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 603 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 660

Query: 268 DVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 661 ATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 717

Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
              +KV  LDGV + QI+AG  HS
Sbjct: 718 KP-KKVVGLDGVAIQQISAGTSHS 740



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 147/357 (41%), Gaps = 57/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +V+ WG  SS QL  G     L PK   TF D        I AG   +  +S  G +  C
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQT-----IEAGQYCTFVISSDGSVRAC 437

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGS 207
           G G++G+LG GD  + S+  K++   ++ + +++       H+L    +    +V+ +G 
Sbjct: 438 GKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE---GEVFSWGD 494

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
           G  G+LG      +    P++  G L    +V +SA    SAA+S +G LYTWG      
Sbjct: 495 GDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGR 552

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERV 317
            G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV
Sbjct: 553 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 612

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFP 370
              +        V  L G+ + ++ AG++ S  +T     + W     +    S      
Sbjct: 613 YKPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 665

Query: 371 PFFINVIAENRA------------------IMTWGWGEHGQLGLGNTCDQI-HPKVV 408
           P  I  +A  R                   +  WG    GQ G GN+   I  PK V
Sbjct: 666 PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 722



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 18/233 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G  +    P L+    +S+V  ++CG +H +AL    S  G  V+
Sbjct: 541 ELYTWGEGDFGRLGHGDSNSRNIPTLVK--DISNVGEVSCGSSHTIAL----SKDGRTVW 594

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G G +G+LGHG+      PK V    G    I  + AG   S  ++ +G ++  G G 
Sbjct: 595 SFGGGDNGKLGHGDTNRVYKPKVVEALQG--MFIRKVCAGSQSSLALTSTGQVYAWGCGA 652

Query: 155 FGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              LG G   + +  P  +       V  I+ G  H L L  D   N+VY +G+   GQ 
Sbjct: 653 C--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHD---NEVYAWGNNSMGQC 707

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS---AALSAEGHLYTWGRGF 263
           G   +    ++ P+  +GL  + I  ISA    S    AL  +  +  W R +
Sbjct: 708 G-QGNSTGPITKPKKVVGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPY 759



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 37/305 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G    +  P+L+       V +    G    A  S      G+++
Sbjct: 488 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED----GELY 543

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGDG 153
           +WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G G
Sbjct: 544 TWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGGG 599

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G+LGHGD      P  V +     + ++  G + SL L       QVY +G G    L
Sbjct: 600 DNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--ACL 654

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NST 266
           G       ++  P++   L    +V IS       ALS +  +Y WG          NST
Sbjct: 655 GCGSSEATALR-PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 713

Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             +  P+ +     ++  Q + G +H L  T              +  D + V+  RP  
Sbjct: 714 GPITKPKKVVGLDGVAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPYC 760

Query: 325 VALEK 329
           V LE+
Sbjct: 761 VDLEE 765



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 121/299 (40%), Gaps = 49/299 (16%)

Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
           D  R  ++  S     +  VS++  ++  G  +  QL  G       P   ++F +    
Sbjct: 359 DYSRTCVSPDSIQTGEAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQT- 417

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGI 240
            I  G   + V+  D     V   G G  G+LG+     +S +L ++T   H  I+ V  
Sbjct: 418 -IEAGQYCTFVISSD---GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVSS 472

Query: 241 SANGD-RSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNH 290
           S   D  + A + EG +++WG G        ++S    P+ +   L        + G+ H
Sbjct: 473 SKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRH 532

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
              ++ DGE+   G    G L   +  S++R +   ++ +SN     V +++ G+ H+  
Sbjct: 533 SAAVSEDGELYTWGEGDFGRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-- 583

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                  I +  + R + ++G G++G+LG G+T     PKVV 
Sbjct: 584 -----------------------IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVE 619


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
             +        +  L G+ + ++ AG++ S  +T     + W     +    S      P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
             I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       +LS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 166/374 (44%), Gaps = 49/374 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G+  + L+P+ ++  + + +  + CG  + +A+ +PS    G+V+S
Sbjct: 34  VTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAV-APSR---GQVYS 89

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG+  D   P+P+ FF G    +  ++ G  H+  V+  G LFT G    
Sbjct: 90  WGWGDFGRLGHGDCNDVFVPRPIEFFSGR--PVHRVACGDTHTLVVAGEGELFTFGRNQN 147

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G      SP  V +   + V  +ACG  HSL   +      V+ +G G+ G LG 
Sbjct: 148 GQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATES---GTVFSWGWGRYGNLGD 204

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFNSTS 267
            + + R   LP   +GL  I +V        SA +S +G ++T+        G G ++  
Sbjct: 205 GESQDR--YLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDR 262

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            V C  +       S  A GW H +     G +   G +  G L   +  SS RP  V +
Sbjct: 263 TVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGD--SSDRPSPVLV 320

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                L G +V  +  G  H+  VT                          E   + +WG
Sbjct: 321 GGA--LAGQRVSLVTCGWRHTVAVT--------------------------EGGRVYSWG 352

Query: 388 WGEHGQLGLGNTCD 401
            G +GQLG G   D
Sbjct: 353 RGVNGQLGHGAEQD 366



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 165/375 (44%), Gaps = 55/375 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V+ ++CG +H +A+ S      G V SWGRG  GQLGHG+  + L PK ++        I
Sbjct: 15  VTAVSCGSSHSVAILSC-----GIVTSWGRGEDGQLGHGQADECLAPKAISTLT--DAGI 67

Query: 129 THISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             +  G  ++  V+ S G +++ G G FG+LGHGD      P  +  F  + VH++ACG 
Sbjct: 68  ESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGD 127

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H+LV+  +    +++ FG  + GQLG+          PQ+ + L    +  ++   + S
Sbjct: 128 THTLVVAGE---GELFTFGRNQNGQLGLGH--TNDCLSPQLVVALQGERVRSVACGSEHS 182

Query: 248 AALSAEGHLYTWGRGF--NSTSDVNCPQSLPS------SLSFSQAALGWNHVLVLTGDGE 299
            A +  G +++WG G   N     +  + LP+       +    A  GW H  V++ DG 
Sbjct: 183 LAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGR 242

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   G S +G L   +    T P  VA      L   ++  +A G  H+       +   
Sbjct: 243 VFTFGWSKYGQLGHGDHTDRTVPCQVAA-----LRHTRISSVAGGWRHTMAADSSGN--- 294

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                                  +  WGW + GQLGLG++ D+  P  V +G     +  
Sbjct: 295 -----------------------LYGWGWNKFGQLGLGDSSDR--PSPVLVGGALAGQRV 329

Query: 420 QLEVFCGSGFTYAIS 434
            L V CG   T A++
Sbjct: 330 SL-VTCGWRHTVAVT 343



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 120/232 (51%), Gaps = 15/232 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++++G   +GQLG G  +D LSPQL+       V  +ACG  H LA T       G VF
Sbjct: 138 ELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATES-----GTVF 192

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG G  G LG GE  D   P  V   +G R  +     GW HS  VS+ G +FT G   
Sbjct: 193 SWGWGRYGNLGDGESQDRYLPTRVVGLEGIR--MVSAECGWRHSAVVSEDGRVFTFGWSK 250

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+   + P +V++  +  +  +A G RH++    D  GN +YG+G  K GQLG
Sbjct: 251 YGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMA--ADSSGN-LYGWGWNKFGQLG 307

Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +  S DR   V +     G     +  ++     + A++  G +Y+WGRG N
Sbjct: 308 LGDSSDRPSPVLVGGALAGQ---RVSLVTCGWRHTVAVTEGGRVYSWGRGVN 356



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 142/312 (45%), Gaps = 24/312 (7%)

Query: 9   TEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS 68
           T+ G  +++  A+  I       QV   +SWG G  G+LG G  +D   P+ +   S   
Sbjct: 63  TDAGIESVVCGAEYTIAVAPSRGQV---YSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRP 119

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L +        G++F++GR  +GQLG G   D L P+ V    G R  +
Sbjct: 120 VHRVACGDTHTLVVAGE-----GELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGER--V 172

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
             ++ G  HS   ++SG +F+ G G +G LG G+ +    P +V       +    CG R
Sbjct: 173 RSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWR 232

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           HS V+ +D    +V+ FG  K GQLG      R+V  P     L    I  ++     + 
Sbjct: 233 HSAVVSED---GRVFTFGWSKYGQLGHGDHTDRTV--PCQVAALRHTRISSVAGGWRHTM 287

Query: 249 ALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAAL---GWNHVLVLTGDGE 299
           A  + G+LY WG       G   +SD   P  +  +L+  + +L   GW H + +T  G 
Sbjct: 288 AADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGR 347

Query: 300 VLMLGGSHHGML 311
           V   G   +G L
Sbjct: 348 VYSWGRGVNGQL 359


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 127/244 (52%), Gaps = 19/244 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +G+LG G   D L PQ + +     + M+A G  H +A+T       G ++
Sbjct: 139 QVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKD-----GNLY 193

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT  DG +  +  ++ GW H+  VS SG L+T G G 
Sbjct: 194 GWGWGRYGNLGLGDRNDRLLPEKVTV-DGDKMAM--VACGWRHTICVSSSGGLYTNGWGK 250

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+  H  P KV +  +K + Q++ G RHS+ L       Q+ G+G  K GQ+G
Sbjct: 251 YGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSS---GQLLGWGWNKFGQIG 307

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
           V  +     S  QV    HD ++  IS     + A++   ++Y+WGRG N       T D
Sbjct: 308 VGNN-FDCCSPMQVNF-PHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETID 365

Query: 269 VNCP 272
            N P
Sbjct: 366 RNVP 369



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 168/377 (44%), Gaps = 59/377 (15%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D L+P  ++  DG    I
Sbjct: 16  VLLVSAGASHSVALLS-----GNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQ--DI 68

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S+SG  +++ G G FG+LGHGD+     P  + +     + QIACG 
Sbjct: 69  ICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGD 128

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H L +  D   +QV  +G  + G+LG+  ++D +    LPQ      +I I  ++A  +
Sbjct: 129 SHCLAVTMD---SQVLSWGRNQNGELGLGTAEDSL----LPQKIQIFEEIPIKMVAAGAE 181

Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDG 298
            S A++ +G+LY WG       G    +D   P+ +       +  A GW H + ++  G
Sbjct: 182 HSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMVACGWRHTICVSSSG 241

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            +   G   +G L   +      P      KV  L    + Q++ G  HS  +T      
Sbjct: 242 GLYTNGWGKYGQLGHGDFEDHLVP-----RKVQALSDKFISQVSGGWRHSMALT------ 290

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                                +  ++ WGW + GQ+G+GN  D   P  VN    F +  
Sbjct: 291 --------------------SSGQLLGWGWNKFGQIGVGNNFDCCSPMQVN----FPHDQ 326

Query: 419 TQLEVFCGSGFTYAISR 435
               + CG   T A++ 
Sbjct: 327 KVQMISCGWRHTIAVTE 343



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 165/382 (43%), Gaps = 53/382 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D L P  L+      +  + CG  H +A     S  G  V+S
Sbjct: 35  VCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMA----RSESGRDVYS 90

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG+  D L P P+    G    I  I+ G +H   V+    + + G    
Sbjct: 91  WGWGDFGRLGHGDHSDLLIPHPIKALQG--LMIQQIACGDSHCLAVTMDSQVLSWGRNQN 148

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G       P K+  F    +  +A G  HS+ + KD  GN +YG+G G+ G LG+
Sbjct: 149 GELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKD--GN-LYGWGWGRYGNLGL 205

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYT--WGR----GFNSTSD 268
             DR   +   +VT+   D + + + A G R +  +S+ G LYT  WG+    G     D
Sbjct: 206 G-DRNDRLLPEKVTV---DGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFED 261

Query: 269 VNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              P+ +   S    SQ + GW H + LT  G++L  G +  G +          P+ V 
Sbjct: 262 HLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVN 321

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
                     KV  I+ G  H+  VT                          E   + +W
Sbjct: 322 FPHDQ-----KVQMISCGWRHTIAVT--------------------------ERENVYSW 350

Query: 387 GWGEHGQLGLGNTCDQIHPKVV 408
           G G +GQLG G T D+  P ++
Sbjct: 351 GRGANGQLGNGETIDRNVPTII 372



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 54/268 (20%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDI 235
           + V  ++ G  HS+ LL    GN V  +G G+ GQLG   + DR+     P     L   
Sbjct: 14  RRVLLVSAGASHSVALLS---GNVVCSWGRGEDGQLGHGDTDDRL----FPTKLSALDGQ 66

Query: 236 EIVGISANGDRSAALSAEGH-LYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAAL 286
           +I+ ++   D + A S  G  +Y+WG       G    SD+  P  + +   L   Q A 
Sbjct: 67  DIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIAC 126

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
           G +H L +T D +VL  G + +G L        T   S+  +K+   + + +  +AAGAE
Sbjct: 127 GDSHCLAVTMDSQVLSWGRNQNGELG-----LGTAEDSLLPQKIQIFEEIPIKMVAAGAE 181

Query: 347 HSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
           HS  +T                          ++  +  WGWG +G LGLG+  D++ P+
Sbjct: 182 HSVAIT--------------------------KDGNLYGWGWGRYGNLGLGDRNDRLLPE 215

Query: 407 VVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            V +     + D    V CG   T  +S
Sbjct: 216 KVTV-----DGDKMAMVACGWRHTICVS 238



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG    GQ+G G   D  SP  +N      V M++CG  H +A+T   +V     +SWGR
Sbjct: 298 WGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENV-----YSWGR 352

Query: 99  GSSGQLGHGEMVDALYPKPVTFF 121
           G++GQLG+GE +D   P  +  F
Sbjct: 353 GANGQLGNGETIDRNVPTIIEAF 375


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 131/247 (53%), Gaps = 18/247 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +      SV M+A G  H  A+T       G+++
Sbjct: 129 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED-----GELY 183

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V+  +G +  +  ++ GW H+  VS SG L+T G   
Sbjct: 184 GWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK--MVKVACGWRHTISVSSSGGLYTYGWSK 241

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+  H +P K+ +     + +I+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 242 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSD---GKLYGWGWNKFGQVG 298

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
           V  D +   S  QV    H+ ++V IS     + A++   ++++WGRG N       + D
Sbjct: 299 VG-DNVDHCSPVQVKF-PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 356

Query: 269 VNCPQSL 275
            N P+ +
Sbjct: 357 RNIPKMI 363



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 162/383 (42%), Gaps = 62/383 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D LSP  L+      V  + CG  H  A +   +    +V+S
Sbjct: 37  VCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFT----QVYS 92

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG             D   P+P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 93  WG------------CDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQN 138

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ +F   +V  +A G  H+  + +D    ++YG+G G+ G LG+
Sbjct: 139 GQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED---GELYGWGWGRYGNLGL 195

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R V  P+    +  +++V ++     + ++S+ G LYT+G       G     D 
Sbjct: 196 GDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDH 253

Query: 270 NCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +      S+ + GW H + LT DG++   G +  G +   + V    P+ V  
Sbjct: 254 LTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 313

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                    KV+ I+ G  H+  VT                          E + + +WG
Sbjct: 314 PHEQ-----KVVHISCGWRHTLAVT--------------------------ERQNVFSWG 342

Query: 388 WGEHGQLGLGNTCDQIHPKVVNL 410
            G +GQLG G + D+  PK++ +
Sbjct: 343 RGTNGQLGHGESIDRNIPKMIEV 365



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 138/339 (40%), Gaps = 59/339 (17%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           ISAG +HS  +     + + G G  GQLGHGD     SP  +S+     V  + CG  H+
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
               +     QVY +G                +  PQ    LH + I  I+       A+
Sbjct: 81  TAYSESF--TQVYSWGC--------------DLFTPQPIKALHGLRIKQIACGDSHCLAV 124

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
           + +G + +WGR      G  +T D   PQ + +   +S    A G  H   +T DGE+  
Sbjct: 125 TMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYG 184

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK-----FHW 357
            G   +G L   +R     P     EKVS ++GVK++++A G  H+  V+       + W
Sbjct: 185 WGWGRYGNLGLGDRNDRLVP-----EKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGW 239

Query: 358 VRLFIISYTPF---FPPFFINVIAEN---------RAIMT---------WGWGEHGQLGL 396
            +   + +  F     P  +  + EN         R  M          WGW + GQ+G+
Sbjct: 240 SKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGV 299

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G+  D   P  V    +F +    + + CG   T A++ 
Sbjct: 300 GDNVDHCSPVQV----KFPHEQKVVHISCGWRHTLAVTE 334



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 53/262 (20%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDI 235
           + V  I+ G  HS+ LL    GN V  +G G+ GQLG   ++DR+     P     L   
Sbjct: 16  RRVLLISAGASHSVALLX---GNVVCSWGRGEDGQLGHGDAEDRLS----PTYLSALDGH 68

Query: 236 EIVGISANGDRSAALSAE-GHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
           E+V ++   D + A S     +Y+WG       D+  PQ + +   L   Q A G +H L
Sbjct: 69  EVVSVTCGADHTTAYSESFTQVYSWG------CDLFTPQPIKALHGLRIKQIACGDSHCL 122

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +T DGEV   G + +G L        T   S+  +K+    GV V  +AAGAEH+A VT
Sbjct: 123 AVTMDGEVQSWGRNQNGQLG-----LGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVT 177

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                     E+  +  WGWG +G LGLG+  D++ P+ V+  +
Sbjct: 178 --------------------------EDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVE 211

Query: 413 EFQNRDTQLEVFCGSGFTYAIS 434
             +     ++V CG   T ++S
Sbjct: 212 GVK----MVKVACGWRHTISVS 229


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 164/330 (49%), Gaps = 29/330 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSP-QL--LNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
            K+++ G GT+G+LG G  ++  +P QL  LN   +  V++ + GG H +ALT     + G
Sbjct: 3038 KLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHS-GGKHAMALT-----LDG 3091

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            KVFSWG G  G+LGH   +    PK +      R  I  I+ G +HS  +S +G LFT G
Sbjct: 3092 KVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKR--IRDIACGSSHSAAISSTGELFTWG 3149

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             G +G+LGHGD  +   P  V + +  ++ Q+ACG R +  L     G  V+ +G G  G
Sbjct: 3150 LGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEG-LVFSWGDGDFG 3208

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNS 265
            +LG  +       +P     L+ + +  I      S AL+  G +YTWG+G        S
Sbjct: 3209 KLG--RGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGS 3266

Query: 266  TSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
               V  P +L  SLS  +    A+G  H L  T  G+V   G + HG   +   + + +P
Sbjct: 3267 DQHVRKP-TLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKP 3325

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
                   V NL+GV+V ++A G+ HS   T
Sbjct: 3326 -----SLVLNLEGVRVNRVACGSSHSIAWT 3350



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 10/226 (4%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            KV+SWG G DG+LG G  +    PQL++      +  +ACGGAH  A+T+     GG+++
Sbjct: 4075 KVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTA-----GGEIY 4129

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D + PK V    G +       +G   +  ++D   +++ GDG 
Sbjct: 4130 TWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGD 4189

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L +      VY +G G   +LG
Sbjct: 4190 YGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4246

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
               D    V  P+    L   +I+ I+       A S  G ++TWG
Sbjct: 4247 HGSD--EHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWG 4290



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 23/281 (8%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
           G H LAL+       G V+SWG G  G+LGHG+      P  +T   G    + HIS G 
Sbjct: 530 GKHSLALSC-----DGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGK--NVIHISCGA 582

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            +S  V+ SG ++T G G +G+LGHG    H+ P  V    +  +  IACG   +  L  
Sbjct: 583 TYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTL-- 640

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
             + N    F  G  G   +          P++   L DIE+  +      S AL+  G 
Sbjct: 641 -AVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGS 699

Query: 256 LYTWGRGFN------STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           +YTWG+G N      S + V  P+ +   +     + A+G  HVL LT DGEV   G + 
Sbjct: 700 VYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRND 759

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +G + +    + + P  + L     L G  ++ I  G   S
Sbjct: 760 NGQVGETSETNVSEPTLLTL-----LQGKNIVDIDCGPNQS 795



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL++      GKV+SWG G  G+LGHG      +P+ +    G    I  I+ G
Sbjct: 4063 GGKHCLALST-----DGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKE--IVDIACG 4115

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+  G ++T G G +G+LGHGD      P  V + +   V  IACG     +L 
Sbjct: 4116 GAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLC 4175

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4176 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTR 4230

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4231 SGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWG 4290

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP       V  L G  + ++A G+ HS
Sbjct: 4291 DNDEGQLGDGTMNAIHRP-----RLVVTLQGKNINRVACGSAHS 4329



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKV 93
            VWSWG G  G+LG G       P  + + SL+   V  + CG    +ALT       G V
Sbjct: 4182 VWSWGDGDYGKLGRGGSDGCKIP--MKIESLAGLGVVKVECGSQFSVALTR-----SGSV 4234

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG+G   +LGHG      +PK +    G +  I  I+ G  H    SD G +FT GD 
Sbjct: 4235 YTWGKGDYHRLGHGSDEHVRHPKKIAALQGKK--IICIATGSLHCVACSDLGEVFTWGDN 4292

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
              GQLG G   +   P  V +   KN++++ACG  HSL
Sbjct: 4293 DEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSL 4330



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LGTG      +P+L+       V+ + CG    LALT       G V++
Sbjct: 648 VFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTK-----SGSVYT 702

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G + +LGHG      +PK V   +G    I  ++ G  H   ++D G ++  G    
Sbjct: 703 WGKGDNHRLGHGSENHVRFPKLVEGLNGK--CIKKVAVGSGHVLALTDDGEVYGWGRNDN 760

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           GQ+G     + S P  ++    KN+  I CG   S+
Sbjct: 761 GQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSI 796



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 152/384 (39%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P         R     +  G      V+  G ++  
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPV--QLVGGEQTLLAVTSDGKVYAT 4025

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   +  +P  + S  +  + ++A   G +H L L  D    +VY +G G
Sbjct: 4026 GYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTD---GKVYSWGEG 4082

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
              G+LG           PQ+   L   EIV I+  G  SAA++A G +YTWG+G      
Sbjct: 4083 DDGKLGHGNKN--GCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLG 4140

Query: 263  FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
               + D   P+ + + + F    +    G    L +T D  V   G   +G L       
Sbjct: 4141 HGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4200

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFP 370
               P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S      
Sbjct: 4201 CKIPM-----KIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRH 4255

Query: 371  PFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIH-PK-VVNL 410
            P  I  +   + I                   TWG  + GQLG G T + IH P+ VV L
Sbjct: 4256 PKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDG-TMNAIHRPRLVVTL 4314

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  + A S
Sbjct: 4315 QGKNINR-----VACGSAHSLAWS 4333


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 167/376 (44%), Gaps = 56/376 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DGH+  I
Sbjct: 8   VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 60

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S SG  +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 61  VSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 120

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  +    +V  +G  + GQLG+       V  PQ       I I  ++A  + +
Sbjct: 121 SHCLAVTXE---GEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKXVAAGAEHT 175

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
           AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++  G 
Sbjct: 176 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      K+  L    + QI+ GA H+  +T       
Sbjct: 236 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGARHTXALT------- 283

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                               +  +  WGW + GQ+G+GN  DQ  P  V     F +   
Sbjct: 284 -------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQK 320

Query: 420 QLEVFCGSGFTYAISR 435
            ++V CG   T A++ 
Sbjct: 321 VVQVSCGWRHTLAVTE 336



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 162/381 (42%), Gaps = 50/381 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D  SP  L+      +  + CG  H +A +      G +V+S
Sbjct: 27  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GXEVYS 82

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 83  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTXEGEVQSWGRNQN 140

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 141 GQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 197

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R V  P+        +   ++     + ++S  G LYT+G       G     D 
Sbjct: 198 GDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH 255

Query: 270 NCPQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L + S SF SQ + G  H   LT DG++   G +  G +     +    P+ V  
Sbjct: 256 LIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRF 315

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                 D  KV+Q++ G  H+  VT                          E   +  WG
Sbjct: 316 P-----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWG 344

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG+G + D+  PK++
Sbjct: 345 RGTNGQLGIGESVDRNFPKII 365



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 140/302 (46%), Gaps = 24/302 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q   +V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T       
Sbjct: 75  QSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXE----- 129

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G+  D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  
Sbjct: 130 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKXVAAGAEHTAAVTEDGDLYGW 187

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P +V+S   +    +ACG RH++ +        +Y +G  K 
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISV---SYSGALYTYGWSKY 244

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG     +    +P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 245 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGW--GWNKFGQVG 300

Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N  Q  P  + F       Q + GW H L +T    V   G   +G L   E V   
Sbjct: 301 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 360

Query: 321 RP 322
            P
Sbjct: 361 FP 362


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 137/292 (46%), Gaps = 23/292 (7%)

Query: 12  GKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM 71
           G +++I  A       E+E QV   +SWG G  G+LG G   D  +PQ +       +  
Sbjct: 67  GITSVICGADHTTAYSEDEHQV---YSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           LACG +H LA+T     + G+V SWGR  +GQLG G   D+L P+ +  F+G   ++  I
Sbjct: 124 LACGDSHCLAVT-----MAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEG--ISVKMI 176

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           +AG  H+  V++ G ++  G G +G LG GD      P KVSS     +  +ACG RH++
Sbjct: 177 AAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTI 236

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +        +Y +G  K GQLG          +P     L D     IS     + AL+
Sbjct: 237 TVSSS---GSLYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALT 291

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLT 295
           ++G LY WG       G    +D   P   + P     +Q A GW H L  T
Sbjct: 292 SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 161/378 (42%), Gaps = 60/378 (15%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           +V +++ G +H +AL     + G  + +WGRG  GQLGHG+  D L P  ++ FD     
Sbjct: 15  AVVLVSAGASHSVAL-----LAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAP--G 67

Query: 128 ITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           IT +  G +H + +  D   +++ G G FG+LGHG+     +P  V +     + Q+ACG
Sbjct: 68  ITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACG 127

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             H L +    +  +V  +G  + GQLG+  ++D +    LPQ       I +  I+A  
Sbjct: 128 DSHCLAV---TMAGEVLSWGRNQNGQLGLGTTEDSL----LPQTIQAFEGISVKMIAAGA 180

Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
           + +AA++ +G +Y WG       G    +D   P+ + S         A GW H + ++ 
Sbjct: 181 EHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSS 240

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            G +   G S +G L   +      P      KV  L      QI+ G  H+  +T    
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVP-----HKVEALKDSSTSQISGGWRHTMALT---- 291

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                                  +  +  WGW + GQ+G G+  D   P  VN    F  
Sbjct: 292 ----------------------SDGKLYGWGWNKFGQVGAGDNADHCSPAQVN----FPE 325

Query: 417 RDTQLEVFCGSGFTYAIS 434
                +V CG   T A +
Sbjct: 326 EQKVAQVACGWRHTLAFT 343



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 143/323 (44%), Gaps = 24/323 (7%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG G DGQLG G   D L P +++      ++ + CG  H  A +        +V+SWG
Sbjct: 37  TWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEH----QVYSWG 92

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG   D   P+PV    G +  I  ++ G +H   V+ +G + + G    GQ
Sbjct: 93  WGDFGRLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G       P  + +F   +V  IA G  H+  + +D     +YG+G G+ G LG+  
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTED---GDIYGWGWGRYGNLGLGD 207

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
              R V  P+    +   ++V ++     +  +S+ G LYT+G       G     D   
Sbjct: 208 RNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV 265

Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  + +    S SQ + GW H + LT DG++   G +  G +   +      P  V   +
Sbjct: 266 PHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPE 325

Query: 330 VSNLDGVKVIQIAAGAEHSAVVT 352
                  KV Q+A G  H+   T
Sbjct: 326 EQ-----KVAQVACGWRHTLAFT 343


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 160/329 (48%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S AL++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +  L L  D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4233 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4292

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  + Q
Sbjct: 4293 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4347

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4348 ISAGRCHSAAWTA 4360



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4225 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4283 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4313

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 150/358 (41%), Gaps = 57/358 (15%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +V+ WG  SS QL  G     L PK  ++F D        I AG   +  +S  G +  C
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQT-----IEAGQYCTFVISTDGSVRAC 427

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGS 207
           G G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGD 484

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
           G  G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG      
Sbjct: 485 GDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERV 317
            G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFP 370
              +        V  L G+ + ++ AG++ S  +T     + W     +    S      
Sbjct: 603 YKPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 371 PFFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
           P  I  +A  R                   +  WG    GQ G GN+   I  PK V+
Sbjct: 656 PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  V +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       AL  +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4256



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKVV 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVE 609


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 161/379 (42%), Gaps = 46/379 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D  SP  L+      +  + CG  H +A +      G +V+S
Sbjct: 25  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 80

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G R  I  I+ G +H   V+  G + + G    
Sbjct: 81  WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 138

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F    +  +A G  H+  + +D     +YG+G G+ G LG+
Sbjct: 139 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 195

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
                R V     + G   + +V        S + S   + Y W +    G     D   
Sbjct: 196 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255

Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  L + S SF SQ + G+ H + LT DG++   G +  G +     +    P+ V    
Sbjct: 256 PHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 315 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 344

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  PK++
Sbjct: 345 TNGQLGIGESVDRNFPKII 363



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 166/376 (44%), Gaps = 56/376 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DGH+  I
Sbjct: 6   VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 58

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S SG  +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 59  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 118

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  +    +V  +G  + GQLG+       V  PQ       I I  ++A  + +
Sbjct: 119 SHCLAVTME---GEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHT 173

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
           AA++ +G LY WG       G    +D   P+ + S+     S  A GW H + ++  G 
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      K+  L    + QI+ G  H+  +T       
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGFRHTMALT------- 281

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                               +  +  WGW + GQ+G+GN  DQ  P  V     F +   
Sbjct: 282 -------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQK 318

Query: 420 QLEVFCGSGFTYAISR 435
            ++V CG   T A++ 
Sbjct: 319 VVQVSCGWRHTLAVTE 334



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       + M+A G  H  A+T       G ++
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 183

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ VT   G + ++  ++ GW H+  VS SG L+T G   
Sbjct: 184 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 241

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD   H  P K+ +  N  + QI+ G RH++ L  D    ++YG+G  K GQ+G
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSD---GKLYGWGWNKFGQVG 298

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           V  + +   S  QV     D ++V +S     + A++   +++ WGRG N
Sbjct: 299 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + 
Sbjct: 73  QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 127

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G+  D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  
Sbjct: 128 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 185

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG GD      P +V+S   + +  +ACG RH++ +        +Y +G  K 
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 242

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQLG     +    +P     L +  I  IS     + AL+++G LY W  G+N    V 
Sbjct: 243 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGW--GWNKFGQVG 298

Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              N  Q  P  + F       Q + GW H L +T    V   G   +G L   E V   
Sbjct: 299 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 358

Query: 321 RP 322
            P
Sbjct: 359 FP 360


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  131 bits (329), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 118/470 (25%), Positives = 193/470 (41%), Gaps = 111/470 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGG 91
           +++SWG+G  G LG G   D   P+ L +        +  +ACG  H + LT        
Sbjct: 309 ELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKK----- 363

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           K+ +WG+G  G+LGHG+  D L PK +  +D  +     ISAG +HS  +S+   L+T G
Sbjct: 364 KILTWGQGQGGRLGHGDEDDVLVPKEI--YDLSKKKPIFISAGESHSAAISEKLNLYTWG 421

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            GT+G+LGHG   S   P  +       +  ++CG  H+L +        VY FG GK G
Sbjct: 422 TGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQ---GTVYAFGQGKYG 478

Query: 212 QLGVSK-------DRIRSVSLPQVTIGLHDI------EIVGISANGDRSAALSAEGHLYT 258
           +LG+++        R   +S  +V +   ++      E +  +A  + S  L+  G +Y+
Sbjct: 479 KLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYS 538

Query: 259 WG----------RGFNSTSDVNCPQSLPSSL--------------------SFS----QA 284
           WG          +GF     +   Q +P  L                    +FS    Q 
Sbjct: 539 WGYNGKGLLGRQKGFEEHLPIEIGQ-IPGELIGKIPNIDELIQRGDLKQEETFSYEVIQV 597

Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL-------------------SV 325
           A G  + + LT  GEV + G + +G L+  +  ++ R                      +
Sbjct: 598 ACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQM 657

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
           +L K      V++  IA G EH                          I  I+    +  
Sbjct: 658 SLIKFPGETTVRINYIACGGEH--------------------------IFAISRMNELFG 691

Query: 386 WGWGEHGQLGLGNTCD-QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           WG  + GQLGLG   D    P ++    +  +++ Q+ + CG  ++ A+S
Sbjct: 692 WGRNDEGQLGLGFVSDFTAEPTLIR---QIAHKNIQM-IACGDNYSAAVS 737



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 111/473 (23%), Positives = 190/473 (40%), Gaps = 110/473 (23%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + +++WG GT G+LG G    E  P+L+       +  ++CG  H LA+T       G V
Sbjct: 415 LNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQ-----GTV 469

Query: 94  FSWGRGSSGQLG-HGEMVDALYPKP--VTFF------------DGHRYTITHISAGWNHS 138
           +++G+G  G+LG + +  + ++ +P  ++F+            D +   +   +AG+NHS
Sbjct: 470 YAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILA--AAGYNHS 527

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-------------------- 178
             ++ SG +++ G    G LG         P+++     +                    
Sbjct: 528 LCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQE 587

Query: 179 -----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR--IRSV-------- 223
                 V Q+ACG+ +++ L     G +VY FGS   GQL   KD+   R          
Sbjct: 588 ETFSYEVIQVACGVLNTVSLTN---GGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNN 644

Query: 224 --------SLPQVTI----GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
                   S  Q+++    G   + I  I+  G+   A+S    L+ WGR      G   
Sbjct: 645 NDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGF 704

Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            SD     +L   ++       A G N+   ++  GE+ + G   +G L   + +     
Sbjct: 705 VSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFL 764

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           LS  L  + NL  +K   +A G  H            L I  Y P  P        ++  
Sbjct: 765 LSFTL--IQNLAPIK--SVACGPNH-----------MLAIADYNPDHP-------IKDGM 802

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 434
             +WG    GQLG+G+  D   PK + N  + F+      +V CG  F+  ++
Sbjct: 803 CYSWGRNWKGQLGIGSKEDSNVPKKIHNAKERFK------KVACGQDFSIGLT 849



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 88/348 (25%), Positives = 139/348 (39%), Gaps = 61/348 (17%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           ++ +ACGG H+ A++  +     ++F WGR   GQLG G  V     +P          I
Sbjct: 670 INYIACGGEHIFAISRMN-----ELFGWGRNDEGQLGLG-FVSDFTAEPTLIRQIAHKNI 723

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGM 187
             I+ G N+S  VS  G LF  G+   G+LG G        +  +   N   +  +ACG 
Sbjct: 724 QMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGP 783

Query: 188 RHSLVL--------LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--I 237
            H L +        +KD +    Y +G   +GQLG+      +V  P+    +H+ +   
Sbjct: 784 NHMLAIADYNPDHPIKDGM---CYSWGRNWKGQLGIGSKEDSNV--PK---KIHNAKERF 835

Query: 238 VGISANGDRSAALSAEGHLYTWGRG-----FNSTSDVNCPQSLPS--SLSFSQAALGWNH 290
             ++   D S  L+    +Y WG          T DV+ PQ L +         A  +  
Sbjct: 836 KKVACGQDFSIGLTYGNQVYLWGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIACSYKF 895

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK--VSNLDGVKVIQIAAGAEHS 348
             VL   GE+L+ G      +   ++        +A+ K  +   D + +  I+AG  HS
Sbjct: 896 CSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFL-METISAGQNHS 954

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           A V+ K                          R++ TWG  E G+LGL
Sbjct: 955 AAVSVK--------------------------RSLYTWGHAEGGRLGL 976



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 32/252 (12%)

Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN- 179
           F  H   IT ++ G  H   +++   LF+ G G +G LG G       P  +   + K  
Sbjct: 284 FPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHL--IIEKKD 341

Query: 180 ----VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
               +  IACG  HS+ L +     ++  +G G+ G+LG   +    V +P+    L   
Sbjct: 342 YTYFIEGIACGKYHSMCLTRK---KKILTWGQGQGGRLGHGDE--DDVLVPKEIYDLSKK 396

Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQSLPSSL------SFSQAALG 287
           + + ISA    SAA+S + +LYTWG G        ++  +  P  +           + G
Sbjct: 397 KPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCG 456

Query: 288 WNHVLVLTGDGEVLMLGGSHHGML-----------SDPERVSSTRPLSVALEKVSNLDGV 336
             H L +TG G V   G   +G L           S PE++S  + + V  +++   D  
Sbjct: 457 AFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYK-VGVEPQEMLVQDKN 515

Query: 337 KVIQIAAGAEHS 348
           + I  AAG  HS
Sbjct: 516 EAILAAAGYNHS 527



 Score = 48.5 bits (114), Expect = 0.007,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 46/213 (21%)

Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL-----PSSLSF 281
           H   I  ++       A++ +  L++WG G      F +  D+  P+ L       +   
Sbjct: 287 HTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFI 346

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H + LT   ++L  G    G L   +      P     +++ +L   K I I
Sbjct: 347 EGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVP-----KEIYDLSKKKPIFI 401

Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
           +AG  HSA ++ K +                          + TWG G +G+LG G    
Sbjct: 402 SAGESHSAAISEKLN--------------------------LYTWGTGTYGRLGHGMDTS 435

Query: 402 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           +  PK++   D+++     + V CG+  T AI+
Sbjct: 436 EKKPKLIEDLDQYE----IIHVSCGAFHTLAIT 464



 Score = 47.8 bits (112), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 11/223 (4%)

Query: 44  DGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALT--SPSSVI-GGKVFSWGRG 99
           +G+LG G+ L          + +L+ +  +ACG  H+LA+   +P   I  G  +SWGR 
Sbjct: 750 NGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRN 809

Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
             GQLG G   D+  PK +      +     ++ G + S  ++    ++  G+  +    
Sbjct: 810 WKGQLGIGSKEDSNVPKKI---HNAKERFKKVACGQDFSIGLTYGNQVYLWGNNKYF-CD 865

Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
               +    P  + +     +  IAC  +   V L D     ++G     R +    KD+
Sbjct: 866 SKITKDVDIPQLLQALEQAQIKDIACSYKFCSV-LNDKGEILIWGSYLTDRIKQNQKKDK 924

Query: 220 IRS--VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                +++ +  +   D  +  ISA  + SAA+S +  LYTWG
Sbjct: 925 KSQNHLAITKFPMRKFDFLMETISAGQNHSAAVSVKRSLYTWG 967


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 144/279 (51%), Gaps = 26/279 (9%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTC 150
           VFSWGRG  GQLG G+  D   P   T+ D  R    ITH++ G  H+  V+ +G L+T 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEP---TYVDALRGVGIITHVTCGSYHTAAVASNGDLYTW 57

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL-KDCLGNQVYGFGSGK 209
           G G +G+LGHG+   HS+P +V + V  ++  IACG RH+ V+  K CL    Y +G  +
Sbjct: 58  GGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCL----YTWGDKE 113

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNS 265
            G  G   D       P++   L+  ++V +SA G  +A L+ +   + WG G      +
Sbjct: 114 NGVAG-HGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGN 172

Query: 266 TSDVNC--PQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            ++ NC  P+ + S +     Q A G  H  V+T DG++   GG  HG L   ++V+  +
Sbjct: 173 GTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLK 232

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--GKFHWV 358
           P       V  LDGV V QI  G  HS  +T  G++H V
Sbjct: 233 P-----TLVEALDGVVVKQITCGWSHSVALTSEGEYHLV 266



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 26/280 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V+SWG G DGQLG G   D+  P  ++ L  +  ++ + CG  H  A+ S      G ++
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASN-----GDLY 55

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  G+LGHG       P+ V    G   +I  I+ G  H+  V+  GCL+T GD  
Sbjct: 56  TWGGGMYGKLGHGNESGHSTPRRVEALVG--LSIVDIACGSRHTAVVTSKGCLYTWGDKE 113

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN-KNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  GHGD   H    K+   +N K V Q+ ACG  H+  L  D   ++ + +G GK G+
Sbjct: 114 NGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGF-HTACLTDD---HETFAWGEGKFGR 169

Query: 213 LGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
           LG   +R   S  L +  IG +  +   ++  G  SA ++ +G +YT+G G         
Sbjct: 170 LGNGTERNCHSPRLIESLIGKYPCQ---VACGGFHSAVITRDGKMYTFGGGEHGQLGHAD 226

Query: 268 DVN-CPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLML 303
            VN    +L  +L      Q   GW+H + LT +GE  ++
Sbjct: 227 KVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYHLV 266



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 108/277 (38%), Gaps = 48/277 (17%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV-HQIACGMRHSLVLLKDCLGNQVYGF 205
           +F+ G G  GQLG GD      P  V +     +   + CG  H+  +  +     +Y +
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASN---GDLYTW 57

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
           G G  G+LG   +   S   P+    L  + IV I+     +A ++++G LYTWG   N 
Sbjct: 58  GGGMYGKLGHGNESGHST--PRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENG 115

Query: 266 TS---DVNCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
            +   D    Q  P  L           +A G+ H   LT D E    G    G L +  
Sbjct: 116 VAGHGDTEGHQYTPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFGRLGNGT 174

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
             +   P       + +L G    Q+A G  HSAV+T                       
Sbjct: 175 ERNCHSP-----RLIESLIGKYPCQVACGGFHSAVIT----------------------- 206

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
               +  + T+G GEHGQLG  +  +++ P +V   D
Sbjct: 207 ---RDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALD 240



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 7/111 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           + ++WG G  G+LG G   +  SP+L+          +ACGG H   +T       GK++
Sbjct: 158 ETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRD-----GKMY 212

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           ++G G  GQLGH + V+ L P  V   DG    +  I+ GW+HS  ++  G
Sbjct: 213 TFGGGEHGQLGHADKVNKLKPTLVEALDG--VVVKQITCGWSHSVALTSEG 261



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           + +WG GE GQLG+G+T DQ  P  V   D  +       V CGS  T A++
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYV---DALRGVGIITHVTCGSYHTAAVA 49


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Takifugu rubripes]
          Length = 3883

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 163/347 (46%), Gaps = 38/347 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++  P+ L L    ++  VS       H LA+T     + G+
Sbjct: 433 VKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAIT-----VDGE 487

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTC 150
           VFSWG G  G+LGHG      YPK      G  ++  +   SAG+ HS  V+  G L+T 
Sbjct: 488 VFSWGDGEYGKLGHGNSATQKYPK---IIQGPLFSKIVVSASAGYRHSAAVTKDGELYTW 544

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+G FG+LGH D +S + P  V       V Q+ACG  H++ + +D  G  V+ FG G  
Sbjct: 545 GEGDFGRLGHSDSQSRNMPTLVKDI--SGVGQVACGSSHTIAVAQD--GRTVWSFGGGDN 600

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNST 266
           G+LG        V  P+V   LH   I  + A    S AL++ G ++ WG     G  S+
Sbjct: 601 GKLG--HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 658

Query: 267 SDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRP 322
              +        LS ++    + G +H L L+ + EV   G +  G        +  TRP
Sbjct: 659 ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRP 718

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS----AVVTGK--FHWVRLFII 363
                +KV  L+GV + QI AG  HS    AV T +    W R F +
Sbjct: 719 -----KKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCV 760



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 168/405 (41%), Gaps = 65/405 (16%)

Query: 19   NAKPKIEEEEEEQQVVKVWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACG 75
            N +P   E+ +E     V+ WG G  GQL   GT      L+P      SLS    + CG
Sbjct: 3008 NVRP---EDWQEGGKSDVYLWGNGRYGQLAGTGTNLTVPTLAP------SLSQTQQVVCG 3058

Query: 76   GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
                  + S      G V + G G  G+LG G   D   P  ++ F G+  T    S G 
Sbjct: 3059 QNCSFLIQS-----NGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGS 3113

Query: 136  N-HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
            + HS  ++++G +F+ GDG FG+LGHG+      P ++ +   ++V Q+ACG RHS V+ 
Sbjct: 3114 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVT 3173

Query: 195  KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
             D    +++ FGSG+ G+LG  +    +  LP+    L    +  +S   + +  LS +G
Sbjct: 3174 AD---GKLFTFGSGESGRLG--QRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDG 3228

Query: 255  HLYTWG--------RGFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLG 304
             +  W          G  S++    PQ +    +    +   G    +V+  DG V   G
Sbjct: 3229 -MAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFG 3287

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
                  L D    + + P     + V +L+G+ +  IA G EH                 
Sbjct: 3288 QERLIGLPDSMLKNRSNP-----QVVPSLEGLFIEDIAVGCEH----------------- 3325

Query: 365  YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                     +  ++    +  WG    GQLGLG+      P ++ 
Sbjct: 3326 ---------VLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLIT 3361



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 145/353 (41%), Gaps = 51/353 (14%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+ WG  SS QL  G +   L PK    F   +     I AG   +  VS  G +  CG 
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQT----IEAGQYCTFSVSTDGSVKACGK 438

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGK 209
           G++G+LG GD  + S P K+    ++N+ +++       H+L +  D    +V+ +G G+
Sbjct: 439 GSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVD---GEVFSWGDGE 495

Query: 210 RGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
            G+LG      +    P++  G L    +V  SA    SAA++ +G LYTWG       G
Sbjct: 496 YGKLGHGNSATQKY--PKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLG 553

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTR 321
            + +   N P  +       Q A G +H + +  DG  V   GG  +G L   +     R
Sbjct: 554 HSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYR 613

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPPFFI 374
           P     + +  L G  + ++ AG++ S  +T     F W     +    S T    P F+
Sbjct: 614 P-----KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRFV 668

Query: 375 N------------------VIAENRAIMTWGWGEHGQLGLGNTCDQI-HPKVV 408
                               ++    +  WG    GQ G G+T   I  PK V
Sbjct: 669 EDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKV 721



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 49/297 (16%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G+G +GQL  G   + + P    S       Q+ CG   S ++  + +   V   G
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSL--SQTQQVVCGQNCSFLIQSNGV---VTAVG 3075

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
             G+ G+LG  + D +   ++     G    ++V    +   S AL+  G +++WG G F 
Sbjct: 3076 EGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3135

Query: 265  STSDVNCP-QSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                 N   Q  P  +         Q A G+ H  V+T DG++   G    G L   +R 
Sbjct: 3136 KLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--QRS 3193

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
            +S + L    E+V+ L+G  V Q++ G  H+ V++                         
Sbjct: 3194 TSNKMLP---ERVAALEGYHVGQVSCGLNHTLVLS------------------------- 3225

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
             +  A+  +G G++G+LG G++  + +P+ V   ++  N+  + +V CG+ F+  ++
Sbjct: 3226 LDGMAVWAFGDGDYGKLGAGSSTAKYYPQKV---EQLCNKGMK-KVCCGAQFSVVVA 3278



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 54/206 (26%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            K++++G+G  G+LG     +++ P+ +       V  ++CG  H L L    S+ G  V+
Sbjct: 3177 KLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVL----SLDGMAVW 3232

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFF--------------------DGHRYT------- 127
            ++G G  G+LG G      YP+ V                       DGH YT       
Sbjct: 3233 AFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLI 3292

Query: 128  -----------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
                                   I  I+ G  H   +S +G ++  G  + GQLG G   
Sbjct: 3293 GLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCN 3352

Query: 165  SHSSPVKVSSFVNKNVHQIACGMRHS 190
                P  +++   KN+ QI+ G  HS
Sbjct: 3353 PVKEPTLITALQGKNIKQISAGRCHS 3378



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 44/219 (20%)

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWG 260
           V   G G  G+LG+     +S+    V     +I+ V  S   D  + A++ +G +++WG
Sbjct: 433 VKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWG 492

Query: 261 RG------FNSTSDVNCPQSLPSSLSFSQ----AALGWNHVLVLTGDGEVLMLGGSHHGM 310
            G        +++    P+ +   L FS+    A+ G+ H   +T DGE+   G    G 
Sbjct: 493 DGEYGKLGHGNSATQKYPKIIQGPL-FSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGR 551

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L   +  S   P       V ++ GV   Q+A G+ H+                      
Sbjct: 552 LGHSDSQSRNMP-----TLVKDISGVG--QVACGSSHT---------------------- 582

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
              I V  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 583 ---IAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIE 618


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 151/330 (45%), Gaps = 34/330 (10%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           S +I  A       +EE Q+   +SWG G  G+LG G   D  +PQ +       ++ +A
Sbjct: 79  SVVICGADHTTAYSDEELQL---YSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 135

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H LA+T     + G V SWGR  +GQLG G   D+L P+ +  F+G R  +  I+A
Sbjct: 136 CGDSHCLAVT-----VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR--VKMIAA 188

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  V++ G L+  G G +G LG GD      P KVSS   + +  +ACG RH++ +
Sbjct: 189 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 248

Query: 194 LKDCLGNQVYGFGSGKRGQLGVS--KDRI---RSVSLPQVTIGLHD-IEIV-------GI 240
                   +Y +G  K GQLG    +D +   +  +L   TI   + +E++       G 
Sbjct: 249 SSS---GSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGF 305

Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCP--QSLPSSLSFSQAALGWNHVL 292
              G    AL+A+G LY WG       G     D   P   + P+     Q A GW H L
Sbjct: 306 RVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 365

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            LT    V   G    G L   E V    P
Sbjct: 366 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIP 395



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 169/396 (42%), Gaps = 51/396 (12%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           DE  P+    +   SV +++ G +H +AL S     GG V SWGRG  GQLGHG+  D  
Sbjct: 11  DEAVPE----APERSVVLISAGASHSVALLS-----GGVVCSWGRGEDGQLGHGDAEDRP 61

Query: 114 YPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPV 170
            P  +T  F D      + +  G +H+   SD    L++ G G FG+LGHG+     +P 
Sbjct: 62  VPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 121

Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
            + +     + QIACG  H L +    +   V+ +G  + GQLG+         LPQ   
Sbjct: 122 PIQALQGVRITQIACGDSHCLAV---TVAGHVHSWGRNQNGQLGLGN--TEDSLLPQKIQ 176

Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFS 282
               + +  I+A  + +AA++ +G LY WG       G     D   P+ + S       
Sbjct: 177 AFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV 236

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK---VSNLDGVKVI 339
             A GW H + ++  G +   G S +G L   +      P  +   K   +S  + V++I
Sbjct: 237 LVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELI 296

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
               G E    V G   W                   +A +  +  WGW + GQ+G+G+ 
Sbjct: 297 FFFLGDE-GFRVGGGIQW------------------ALAADGKLYGWGWNKFGQVGVGDN 337

Query: 400 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            D   P  VN    F N    ++V CG   T A++ 
Sbjct: 338 EDHCSPVQVN----FPNEQKVVQVACGWRHTLALTE 369



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 5/84 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ WG    GQ+G G   D  SP  +N  +   V  +ACG  H LALT   +V     F
Sbjct: 320 KLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV-----F 374

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV 118
           SWGRG+SGQLGHGE+VD   PK +
Sbjct: 375 SWGRGTSGQLGHGEIVDRNIPKMI 398



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS----------MLACGGAHVLALTSP 85
           ++++G    GQLG G   D L P  L     +++S           L   G  V      
Sbjct: 254 IYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQW 313

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           +    GK++ WG    GQ+G G+  D   P  V F +  +  +  ++ GW H+  ++++ 
Sbjct: 314 ALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQK--VVQVACGWRHTLALTEAK 371

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
            +F+ G GT GQLGHG+    + P  + + 
Sbjct: 372 NVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 401


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 36  VWSWGAGTDGQLGTGRLH------DELS----PQLLNLSSLSSVSMLACGGAHVLALTSP 85
           V ++G   DGQLGTG         D++S    PQ +       +  ++CG  H +ALTS 
Sbjct: 8   VTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTS- 66

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
                G V+SWG GS GQLGHG++     P+ + FF+  R  + +IS G  HS  V+  G
Sbjct: 67  ----SGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDG 122

Query: 146 CLFTCGDGTFGQLG-HGDYRS--HSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLG 199
            L+  G+  +GQLG   +Y +   S PVK         + + +++CG  H+  L      
Sbjct: 123 TLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSF--- 179

Query: 200 NQVYGFGSGKRGQLGV--------SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +VY +G G  GQLG+          + +   S P +    +  ++V ++     SAA++
Sbjct: 180 GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVT 239

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLML 303
            +GH+Y WG+      G   +SD   P+ L     +   + + G  H +V+   G+    
Sbjct: 240 EQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAF 299

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           G   +G L   +  S TRP       V  L G  VIQ A G  H+  VT
Sbjct: 300 GRGEYGRLGLGDTKSRTRP-----HLVKALKGKTVIQAACGGSHTLFVT 343



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 158/383 (41%), Gaps = 57/383 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG G+ GQLG G L     PQ +         V  ++CGG H  A+T       G +
Sbjct: 70  VYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKD-----GTL 124

Query: 94  FSWGRGSSGQLGHGEMVDALY---PKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFT 149
           + WG    GQLG  +  +A +   P      +G    TI  +S G  H+  ++  G ++ 
Sbjct: 125 YVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYV 184

Query: 150 CGDGTFGQLGHGD----------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            G G  GQLG G               S P  + +F  + V Q+ACG  HS  + +    
Sbjct: 185 WGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQ--- 241

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             VY +G    G LGV +   + +  P+      DI ++ +S  G  +  ++  G  Y +
Sbjct: 242 GHVYVWGKEDYGMLGVGQSSDQQI--PKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAF 299

Query: 260 GRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           GRG         T     P  + +    +  QAA G +H L +T DG   + G   HG L
Sbjct: 300 GRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRL 359

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                ++  + L V      +L  + V Q +AG  HS             + S  P F P
Sbjct: 360 G----LADMKALGVPTRL--DLGPIPVRQFSAGGAHSVA----------LMHSSRPIFSP 403

Query: 372 FFINVIAENRAIMTWGWGEHGQL 394
             I+ I+ + ++       HG+L
Sbjct: 404 -MISPISTSESV------PHGEL 419



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 104/226 (46%), Gaps = 23/226 (10%)

Query: 35  KVWSWGAGTDGQLGTGR----------LHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           +V+ WG G  GQLG G           L     P LL   +   V  +ACG  H  A+T 
Sbjct: 181 RVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTE 240

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G V+ WG+   G LG G+  D   PK + +FD     +  +S G  H+  V+ S
Sbjct: 241 Q-----GHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFD--DIPVLRVSCGGWHTVVVAKS 293

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G  +  G G +G+LG GD +S + P  V +   K V Q ACG  H+L +  D      Y 
Sbjct: 294 GDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSD---GTAYV 350

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
            G    G+LG++   ++++ +P   + L  I +   SA G  S AL
Sbjct: 351 AGRPDHGRLGLAD--MKALGVP-TRLDLGPIPVRQFSAGGAHSVAL 393



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 131/314 (41%), Gaps = 78/314 (24%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIAC 185
           I  +S G  H+  ++ SG +++ G G+ GQLGHGD +  + P K++ F  +   V  I+C
Sbjct: 51  IVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISC 110

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD-RIRSVSLP---QVTIGLHDIEIVGIS 241
           G  HS  + KD     +Y +G    GQLG+ K+      SLP    +  G     IV +S
Sbjct: 111 GGCHSAAVTKD---GTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVS 167

Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
             G  +AAL++ G +Y WGRG                       LG   V +   + E L
Sbjct: 168 CGGTHTAALTSFGRVYVWGRG-------------------DSGQLGIGSVWMKDPENESL 208

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
           M                ++RP       +   +G KV+Q+A GA HSA VT + H     
Sbjct: 209 M---------------GASRP-----HLLKAFNGEKVVQVACGAFHSAAVTEQGH----- 243

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                                +  WG  ++G LG+G + DQ  PK +   D+       L
Sbjct: 244 ---------------------VYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDI----PVL 278

Query: 422 EVFCGSGFTYAISR 435
            V CG   T  +++
Sbjct: 279 RVSCGGWHTVVVAK 292


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 2465 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 2519

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 2520 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 2571

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 2572 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 2629

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 2630 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 2685

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 2686 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 2745

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 2746 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 2800

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 2801 ISAGRCHSAAWTA 2813



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 2452 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 2502

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 2503 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2562

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 2563 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 2619

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 2620 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2677

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 2678 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 2735

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L G+ +  +A GAEH+                            +A N  + 
Sbjct: 2736 ---QQIPVLAGMIIEDVAVGAEHTLA--------------------------LASNGDVY 2766

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 2767 AWGSNSEGQLGLGHTNHVREPTLVT 2791



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   P    SF      Q+ CG   + V+  +     V   G
Sbjct: 2452 VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 2505

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 2506 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2565

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 2566 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 2622

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 2623 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVS---------------------- 2655

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
               A+   +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A++
Sbjct: 2656 ---ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALT 2708

Query: 435  R 435
            +
Sbjct: 2709 K 2709


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 154/331 (46%), Gaps = 48/331 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +V+SWG+G  GQLGHG+      P+ V  F G  + +  +S G  H+  + ++G +FT
Sbjct: 5   GSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLG--FNVRQVSCGNQHTAILMENGEVFT 62

Query: 150 CGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G G FGQLG G   +   S+P  VS+   K+V Q+ACG  H+  L+ +    Q+Y +GS
Sbjct: 63  FGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDN---GQLYTWGS 119

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
           G+ G+LG   D +R  S P++   L   E+  ++A G  S+ +   G+L TWG G+    
Sbjct: 120 GEYGRLG-HGDEVRQAS-PKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQL 177

Query: 264 --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                +D   P+ +         + A G +H L+LT   EV   G    G L   +    
Sbjct: 178 GHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKH 237

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+      ++ L GV VI I+ G  HSA +T                           
Sbjct: 238 AEPI-----MITALQGVGVIHISTGGFHSAALT--------------------------S 266

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
              + TWG G+ GQLG G+   Q  P VV +
Sbjct: 267 EGVLYTWGGGDKGQLGHGDENSQNIPVVVEV 297



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 123/230 (53%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V+++G G  GQLG G     +  +P L++      V  +ACG  H  AL     +  G+
Sbjct: 59  EVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCAL-----IDNGQ 113

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +++WG G  G+LGHG+ V    PK V    G    +T ++AG  HS  + + G L T G 
Sbjct: 114 LYTWGSGEYGRLGHGDEVRQASPKLVESLQGKE--VTFVAAGGFHSSVIIEGGNLLTWGG 171

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G FGQLGHGD     +P  V        H++ACG  H+L+L +     +V+ +GSG+ G+
Sbjct: 172 GYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQS---QEVWTWGSGEFGK 228

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           LG+  +   +   P +   L  + ++ IS  G  SAAL++EG LYTWG G
Sbjct: 229 LGIGDEEKHAE--PIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGG 276



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 67/135 (49%), Gaps = 7/135 (5%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG G  GQLG G   D  +P+++          +ACG  H L LT        +V++WG
Sbjct: 168 TWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQ-----EVWTWG 222

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LG G+      P  +T   G    + HIS G  HS  ++  G L+T G G  GQ
Sbjct: 223 SGEFGKLGIGDEEKHAEPIMITALQG--VGVIHISTGGFHSAALTSEGVLYTWGGGDKGQ 280

Query: 158 LGHGDYRSHSSPVKV 172
           LGHGD  S + PV V
Sbjct: 281 LGHGDENSQNIPVVV 295



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           Q  +VW+WG+G  G+LG G       P ++       V  ++ GG H  ALTS      G
Sbjct: 214 QSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSE-----G 268

Query: 92  KVFSWGRGSSGQLGHGE 108
            +++WG G  GQLGHG+
Sbjct: 269 VLYTWGGGDKGQLGHGD 285


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 166/349 (47%), Gaps = 45/349 (12%)

Query: 36  VWSWGAGTDGQLGTGRLH------DELS----PQLLNLSSLSSVSMLACGGAHVLALTSP 85
           V ++G   DGQLGTG         D++S    P+ L       +  ++CG  H +ALT+ 
Sbjct: 12  VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTA- 70

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
                G V+SWG GS GQLGHG++     P+ + FF+     + ++S G  HS  V++ G
Sbjct: 71  ----SGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDG 126

Query: 146 CLFTCGDGTFGQLG---HGDYRSHSSPVK---VSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            L+  G+  +GQLG     +    S PVK   +    +++V +++CG  H+  L    LG
Sbjct: 127 TLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTN--LG 184

Query: 200 NQVYGFGSGKRGQLGVSKDRIRS--------VSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +VY +G G  GQLG+    ++         VS P +  G +  ++V ++     SAA++
Sbjct: 185 -RVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVT 243

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLML 303
            +GH+Y WG+      G   TSD   P+ +     +   + + G  H +V+   G+    
Sbjct: 244 EQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAF 303

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           G   +G L   +  S TRP       V  L G  VIQ A G  H+  VT
Sbjct: 304 GRGEYGRLGLGDTKSRTRP-----HLVKALKGQTVIQAACGGSHTLFVT 347



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 154/360 (42%), Gaps = 40/360 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG G+ GQLG G L     PQ +         V  ++CGG H  A+T+      G +
Sbjct: 74  VYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTND-----GTL 128

Query: 94  FSWGRGSSGQLGHGEMVDAL---YPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFT 149
           + WG    GQLG  +  +A    +P      +G    ++  +S G  H+  +++ G ++ 
Sbjct: 129 YMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYV 188

Query: 150 CGDGTFGQLGHG-----DYRSH-----SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            G G  GQLG G     D   +     S P  V  F  + V Q+ACG  HS  + +    
Sbjct: 189 WGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQ--- 245

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             VY +G    G LGV +   +    P+      DI  + +S  G  +  ++  G  Y +
Sbjct: 246 GHVYIWGKEDYGMLGVGQTSDQQT--PKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAF 303

Query: 260 GRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           GRG         T     P  + +    +  QAA G +H L +T DG   + G   HG L
Sbjct: 304 GRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRL 363

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                ++  +PLSV      +L  + V Q++AG  HS  +T     +   +IS  P   P
Sbjct: 364 G----MTDMKPLSVPTRL--DLGPIPVRQVSAGGAHSMALTHSSRPIFSPMISPLPASKP 417



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 147/359 (40%), Gaps = 90/359 (25%)

Query: 93  VFSWGRGSSGQLGHG----------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
           V ++G    GQLG G          ++  + +PK +    G    I  +S G  H+  ++
Sbjct: 12  VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEE--IVAVSCGSRHTMALT 69

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLGN 200
            SG +++ G G+ GQLGHGD +S + P K++ F  +   V  ++CG  HS  +  D    
Sbjct: 70  ASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTND---G 126

Query: 201 QVYGFGSGKRGQLGVSKD-RIRSVSLP---QVTIGLHDIEIVGISANGDRSAALSAEGHL 256
            +Y +G    GQLG+ K+      S P    +  G+ D  +V +S  G  +AAL+  G +
Sbjct: 127 TLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRV 186

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y WGRG                                  D   L +G +      D   
Sbjct: 187 YVWGRG----------------------------------DSGQLGIGSAWLKDTDDNGL 212

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
           +  +RP       V   +G KV+Q+A GA HSA VT + H                    
Sbjct: 213 LGVSRP-----HLVEGFNGEKVVQVACGAFHSAAVTEQGH-------------------- 247

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
                 +  WG  ++G LG+G T DQ  PK V    EF +    L V CG   T  +++
Sbjct: 248 ------VYIWGKEDYGMLGVGQTSDQQTPKRV----EFFDDIPALRVSCGGWHTMVVAK 296



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 107/227 (47%), Gaps = 23/227 (10%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSL--------SSVSMLACGGAHVLALTS 84
           +V+ WG G  GQLG G   L D     LL +S            V  +ACG  H  A+T 
Sbjct: 185 RVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTE 244

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G V+ WG+   G LG G+  D   PK V FFD        +S G  H+  V+ S
Sbjct: 245 Q-----GHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFD--DIPALRVSCGGWHTMVVAKS 297

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G  +  G G +G+LG GD +S + P  V +   + V Q ACG  H+L +  D +    Y 
Sbjct: 298 GDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGI---AYV 354

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            G    G+LG++   ++ +S+P   + L  I +  +SA G  S AL+
Sbjct: 355 AGRPDHGRLGMTD--MKPLSVP-TRLDLGPIPVRQVSAGGAHSMALT 398


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 128/246 (52%), Gaps = 18/246 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +      S+ M+A G  H  A+T       G+++
Sbjct: 143 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTED-----GELY 197

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V+  +G +  +  ++ GW H+  VS SG L+T G   
Sbjct: 198 GWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIM--VACGWRHTISVSSSGGLYTYGWSK 255

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+  H +P KV +  +  +  I+ G RH++ L  D  GN +YG+G  K GQ+G
Sbjct: 256 YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSD--GN-LYGWGWNKFGQVG 312

Query: 215 VSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
           V  D I   S  QV         +V IS     + A++   ++++WGRG N       + 
Sbjct: 313 VG-DNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESM 371

Query: 268 DVNCPQ 273
           D N P+
Sbjct: 372 DRNLPK 377



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 169/384 (44%), Gaps = 50/384 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V SWG G DGQLG G   D  +P QL  L  L  +S + CG  H  + +        +V+
Sbjct: 39  VCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIIS-ITCGADHTTSYSESRM----EVY 93

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG G  G+LGHG   D   P+P+     H   I  I+ G +H   V+  G + + G   
Sbjct: 94  SWGWGDFGRLGHGNSSDLFTPQPIKAL--HSLKIRQIACGDSHCLAVTMDGEVQSWGRNQ 151

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G       P K+ +F   ++  +A G  H+  + +D    ++YG+G G+ G LG
Sbjct: 152 NGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTED---GELYGWGWGRYGNLG 208

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
           +     R V  P+    ++  +++ ++     + ++S+ G LYT+G       G     D
Sbjct: 209 LGDRNDRLV--PEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFED 266

Query: 269 VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              P  + +      S  + GW H + LT DG +   G +  G +   + +    P+ V 
Sbjct: 267 HLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQV- 325

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             K  +     ++QI+ G  H+  +T                          E + + +W
Sbjct: 326 --KFPHEQAHSLVQISCGWRHTLAIT--------------------------ERQNVFSW 357

Query: 387 GWGEHGQLGLGNTCDQIHPKVVNL 410
           G G +GQLG G + D+  PK++ +
Sbjct: 358 GRGTNGQLGHGESMDRNLPKIIEV 381



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 146/322 (45%), Gaps = 29/322 (9%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++V+SWG G  G+LG G   D  +PQ +       +  +ACG +H LA+T     + G+V
Sbjct: 90  MEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVT-----MDGEV 144

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            SWGR  +GQLG G   D+L P+ +  F G   +I  ++AG  H+  V++ G L+  G G
Sbjct: 145 QSWGRNQNGQLGLGTTEDSLVPQKIQAFQG--VSIKMVAAGAEHTAAVTEDGELYGWGWG 202

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G LG GD      P KVS      +  +ACG RH++ +        +Y +G  K GQL
Sbjct: 203 RYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSS---GGLYTYGWSKYGQL 259

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV---- 269
           G           P     L D  I  IS     + AL+++G+LY W  G+N    V    
Sbjct: 260 G--HGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGW--GWNKFGQVGVGD 315

Query: 270 NCPQSLPSSLSFS--------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N     P  + F         Q + GW H L +T    V   G   +G L   E +    
Sbjct: 316 NIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNL 375

Query: 322 PLSVALEKVSNLDGVKVIQIAA 343
           P  +   +V + DG    QI A
Sbjct: 376 PKII---EVLSADGSGGHQIEA 394



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 167/381 (43%), Gaps = 58/381 (15%)

Query: 66  LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
           +  V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  DG  
Sbjct: 17  IRQVILISAGASHSVALLS-----GNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDG-- 69

Query: 126 YTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
             I  I+ G +H+   S+S   +++ G G FG+LGHG+     +P  + +  +  + QIA
Sbjct: 70  LDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIA 129

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISA 242
           CG  H L +  D    +V  +G  + GQLG+  ++D +    +PQ       + I  ++A
Sbjct: 130 CGDSHCLAVTMD---GEVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFQGVSIKMVAA 182

Query: 243 NGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVL 294
             + +AA++ +G LY WG       G    +D   P+  SL +       A GW H + +
Sbjct: 183 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISV 242

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           +  G +   G S +G L   +      P      KV  L    +  I+ G  H+  +T  
Sbjct: 243 SSSGGLYTYGWSKYGQLGHGDFEDHLTP-----HKVEALRDSYISMISGGWRHTMALT-- 295

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                                    +  +  WGW + GQ+G+G+  D   P  V    E 
Sbjct: 296 ------------------------SDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQ 331

Query: 415 QNRDTQLEVFCGSGFTYAISR 435
            +  + +++ CG   T AI+ 
Sbjct: 332 AH--SLVQISCGWRHTLAITE 350


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 1592 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 1646

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 1647 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 1698

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 1699 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 1756

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 1757 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 1812

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 1813 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 1872

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L  +G+V   G +  G L          P       V+ L G  V Q
Sbjct: 1873 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPT-----LVTGLQGKNVRQ 1927

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 1928 ISAGRCHSAAWTA 1940



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 56/385 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 1579 VYLWGAGRHGQLAEAGR--NVMVPAAA--PSFSQAQQVICGQNCTFVIQA-----NGTVL 1629

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 1630 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1689

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 1690 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 1746

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 1747 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 1805 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 1862

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A N  + 
Sbjct: 1863 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 1893

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG    GQLGLG+T     P +V 
Sbjct: 1894 AWGSNSEGQLGLGHTNHVREPTLVT 1918



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   P    SF      Q+ CG   + V+  +     V   G
Sbjct: 1579 VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 1632

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 1633 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1692

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 1693 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 1749

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 1750 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVS---------------------- 1782

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
               A+   +  +G G++G+LGLGN+  +  P+ +++      +    +V CG+ F+ A++
Sbjct: 1783 ---ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALT 1835

Query: 435  R 435
            +
Sbjct: 1836 K 1836


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 1623 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 1677

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 1678 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 1729

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 1730 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 1787

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 1788 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 1843

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 1844 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 1903

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  V Q
Sbjct: 1904 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 1958

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 1959 ISAGRCHSAAWTA 1971



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 1610 VYLWGAGRHGQLAEAGR--NVMVPAAA--PSFSQAQQVICGQNCTFVIQA-----NGTVL 1660

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 1661 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1720

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 1721 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 1777

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 1778 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1835

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 1836 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 1893

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 1894 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 1924

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 1925 AWGSNSEGQLGLGHTNHVREPTLVTV 1950



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   P    SF      Q+ CG   + V+  +     V   G
Sbjct: 1610 VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 1663

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 1664 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1723

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 1724 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 1780

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 1781 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVS---------------------- 1813

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
               A+   +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A++
Sbjct: 1814 ---ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALT 1866

Query: 435  R 435
            +
Sbjct: 1867 K 1867


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 116/228 (50%), Gaps = 12/228 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V  WG   +GQLG G   D L+P  L      +V MLA G  H  A+T       GK++
Sbjct: 139 EVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE-----NGKLY 193

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P  V    G    +  ++ GW H+  V++SG ++T G   
Sbjct: 194 GWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKM--VACGWRHTICVAESGNMYTFGWSK 251

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+  H  P +V +  +K +  I  G RH+  L  D    ++YG+G  K GQ+G
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSD---GRLYGWGWNKFGQVG 308

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
                 +S   PQ+  GL D  +  +      + A++  G++Y+WGRG
Sbjct: 309 CGNTEDQSS--PQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRG 354



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 146/314 (46%), Gaps = 23/314 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G   D   PQ +       V  +ACG +H LA+T+      G+V  
Sbjct: 88  VYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTD-----GEVLG 142

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR  +GQLG G   D L P  +T F+G    +  ++AG  H+  V+++G L+  G G +
Sbjct: 143 WGRNQNGQLGLGHTEDVLTPHKLTAFEG--VAVKMLAAGAEHTTAVTENGKLYGWGWGRY 200

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LG GD      P +V++   + +  +ACG RH++ + +   GN +Y FG  K GQLG 
Sbjct: 201 GNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAES--GN-MYTFGWSKYGQLGH 257

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                    +P     L   +I  I+     + AL ++G LY WG       G  +T D 
Sbjct: 258 GD--FADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQ 315

Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           + PQ +        +    GW H L +T  G V   G    G L   + V  + P  +  
Sbjct: 316 SSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRI-- 373

Query: 328 EKVSNLDGVKVIQI 341
            ++ + DG    QI
Sbjct: 374 -EILSSDGFACEQI 386



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 147/350 (42%), Gaps = 52/350 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  L+ G +H +AL S     G  V SWGRG  GQLGHG+  +  +P  V+  D     I
Sbjct: 16  VLALSAGASHSVALLS-----GDLVCSWGRGEDGQLGHGDAEERHFPTIVSALD--DCEI 68

Query: 129 THISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           + ++ G +H+  +S+S   +++ G G FG+LGHG+      P  + +     V QIACG 
Sbjct: 69  SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGD 128

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  D    +V G+G  + GQLG+       V  P        + +  ++A  + +
Sbjct: 129 SHCLAITTD---GEVLGWGRNQNGQLGLG--HTEDVLTPHKLTAFEGVAVKMLAAGAEHT 183

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGE 299
            A++  G LY WG       G     D   P  + +         A GW H + +   G 
Sbjct: 184 TAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGN 243

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      +V  L   K+  I  G  H+           
Sbjct: 244 MYTFGWSKYGQLGHGDFADHLIP-----HQVQALKSKKIQAITGGWRHT----------- 287

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                       F ++    +  +  WGW + GQ+G GNT DQ  P++V 
Sbjct: 288 ------------FALD---SDGRLYGWGWNKFGQVGCGNTEDQSSPQLVK 322



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG    GQ+G G   D+ SPQL+       V+++ CG  H LA+T       G V+
Sbjct: 295 RLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDR-----GNVY 349

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           SWGRG+SGQLGHG+ VD   PK +       +    I +
Sbjct: 350 SWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIES 388


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 168/347 (48%), Gaps = 38/347 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-MLACGGA--HVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++  P+ L L    ++  + +  G+  H LA+T     + G+
Sbjct: 390 VKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAIT-----VDGE 444

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTC 150
           VFSWG G  G+LGHG      YPK V    G  ++  +   SAG+ HS  V++ G L+T 
Sbjct: 445 VFSWGDGEYGKLGHGNSATQKYPKIV---QGPLFSKIVVSASAGYRHSAAVTNDGELYTW 501

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+G FG+LGH D +S ++P  V       V Q+ACG  H++ + +D  G  ++ FG G  
Sbjct: 502 GEGDFGRLGHSDSQSRNTPTLVKDI--SGVGQVACGSSHTIAVAQD--GRTMWSFGGGDN 557

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNST 266
           G+LG        V  P+V   LH   I  + A    S AL++ G ++ WG     G  S+
Sbjct: 558 GKLG--HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 615

Query: 267 SDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRP 322
              +        LS ++    + G +H L L+ + EV   G +  G        +  TRP
Sbjct: 616 ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRP 675

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS----AVVTGK--FHWVRLFII 363
                +KV  L+GV + QI AG  HS    AV T +    W R F +
Sbjct: 676 -----KKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCV 717



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 164/394 (41%), Gaps = 65/394 (16%)

Query: 19   NAKPKIEEEEEEQQVVKVWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACG 75
            NA+P   E+ +E     V+ WG G  GQL   GT      L+P       LS    + CG
Sbjct: 3669 NARP---EDWQEGGKSDVYLWGNGRYGQLAGTGTNLTLPTLAP------CLSQTQQVVCG 3719

Query: 76   GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
                  + S      G V + G G  G+LG G   D   P  ++ F G+  T    S G 
Sbjct: 3720 QNCSFLIQS-----NGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGS 3774

Query: 136  N-HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
            + HS  ++++G +F+ GDG FG+LGHG+      P ++ +   ++V Q+ACG RHS V+ 
Sbjct: 3775 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVT 3834

Query: 195  KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
             D    +++ FGSG+ G+LG  +    +   P+    L    +  +S   + +  LS +G
Sbjct: 3835 AD---GKLFTFGSGESGRLG--QRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDG 3889

Query: 255  HLYTWG--------RGFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLG 304
             +  W          G  S++    PQ +    +    +   G    +VL  DG V   G
Sbjct: 3890 -MAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFG 3948

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
                  L D    + + P     + V +L+G+ +  IA G EH                 
Sbjct: 3949 QERLIGLPDSMLKNRSNP-----QVVPSLEGLFIEDIAVGCEH----------------- 3986

Query: 365  YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
                     +  ++    I  WG    GQLGLG+
Sbjct: 3987 ---------VLALSSTGDIYAWGCNSEGQLGLGH 4011



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 40/319 (12%)

Query: 56  LSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA 112
           L  ++ NL+S    SS +  AC G    A+T         V+ WG  SS QL  G +   
Sbjct: 309 LFEEICNLASYCLCSSSADTACPGTDGDAVT---------VYVWGSNSSHQLAEGTLEKI 359

Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
           L PK    F   +     I AG   +  VS  G +  CG G++G+LG GD  + S P K+
Sbjct: 360 LLPKLTQGFSDAQT----IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKL 415

Query: 173 SSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
               ++N+ ++        H+L +  D    +V+ +G G+ G+LG      +    P++ 
Sbjct: 416 VLEPHRNIKKVFSSKGSDGHTLAITVD---GEVFSWGDGEYGKLGHGNSATQKY--PKIV 470

Query: 230 IG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS 282
            G L    +V  SA    SAA++ +G LYTWG       G + +   N P  +       
Sbjct: 471 QGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG 530

Query: 283 QAALGWNHVLVLTGDGEVL-MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
           Q A G +H + +  DG  +   GG  +G L   +     RP     + +  L G  + ++
Sbjct: 531 QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRP-----KVIEALHGFIIRKV 585

Query: 342 AAGAEHSAVVTGK---FHW 357
            AG++ S  +T     F W
Sbjct: 586 CAGSQSSLALTSAGQVFAW 604



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 122/293 (41%), Gaps = 49/293 (16%)

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+G +GQL  G   + + P            Q+ CG   S ++  +     V   G G+ 
Sbjct: 3687 GNGRYGQLA-GTGTNLTLPTLAPCL--SQTQQVVCGQNCSFLIQSN---GAVMAVGEGQY 3740

Query: 211  GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSD 268
            G+LG  + D +   ++     G    ++V    +   S AL+  G +++WG G F     
Sbjct: 3741 GRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH 3800

Query: 269  VNCP-QSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
             N   Q  P  +         Q A G+ H  V+T DG++   G    G L      +  +
Sbjct: 3801 GNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQ 3860

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
            P     E+V+ L+G  V Q++ G  H+ V++                          +  
Sbjct: 3861 P-----ERVAALEGYHVGQVSCGLNHTLVLS-------------------------LDGM 3890

Query: 382  AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            A+  +G G++G+LG G++  + +P+ V   ++  N+  + +V CG+ F+  ++
Sbjct: 3891 AVWAFGDGDYGKLGAGSSTAKYYPQKV---EQLCNKGMK-KVCCGAQFSVVLA 3939



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 54/206 (26%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            K++++G+G  G+LG     +++ P+ +       V  ++CG  H L L    S+ G  V+
Sbjct: 3838 KLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVL----SLDGMAVW 3893

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFF--------------------DGHRYT------- 127
            ++G G  G+LG G      YP+ V                       DGH YT       
Sbjct: 3894 AFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLI 3953

Query: 128  -----------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
                                   I  I+ G  H   +S +G ++  G  + GQLG G   
Sbjct: 3954 GLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCN 4013

Query: 165  SHSSPVKVSSFVNKNVHQIACGMRHS 190
                P  +++   KN+ QI+ G  HS
Sbjct: 4014 LVKEPTLITALQGKNIKQISAGRCHS 4039



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 49/295 (16%)

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
           Y +   SA     G   D+  ++  G  +  QL  G       P     F   +   I  
Sbjct: 319 YCLCSSSADTACPGTDGDAVTVYVWGSNSSHQLAEGTLEKILLPKLTQGF--SDAQTIEA 376

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
           G   +  +  D     V   G G  G+LG+     +S+    V     +I+ V  S   D
Sbjct: 377 GQYCTFSVSTD---GSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSD 433

Query: 246 -RSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLSFSQ----AALGWNHVLVL 294
             + A++ +G +++WG G        +++    P+ +   L FS+    A+ G+ H   +
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPL-FSKIVVSASAGYRHSAAV 492

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           T DGE+   G    G L   +  S   P       V ++ GV   Q+A G+ H+      
Sbjct: 493 TNDGELYTWGEGDFGRLGHSDSQSRNTP-----TLVKDISGVG--QVACGSSHT------ 539

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                              I V  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 540 -------------------IAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIE 575


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 156/325 (48%), Gaps = 27/325 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
            KV++ G  T+G+LG G     +S P+ +   S   +  +A   GG H LALT+      G
Sbjct: 3517 KVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTT-----DG 3571

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            KVFSWG G  G+LGH    +   P+ +      R  +  I+ G +HS  ++ +G L+T G
Sbjct: 3572 KVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKR--VRDIACGSSHSAAITSNGDLYTWG 3629

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             G +G+LGHGD  +   P +V +  ++ V Q+ACG R +  L     G +VY +G G  G
Sbjct: 3630 LGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEG-KVYSWGDGDFG 3688

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            +LG  +      ++P     L D ++  I      S AL+  G ++TWG+      G  +
Sbjct: 3689 KLG--RGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT 3746

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             + V  PQ +           A+G  H L +T  G+V   G + HG   +     + +P 
Sbjct: 3747 DAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPA 3806

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHS 348
             V LE      G K+ ++A G+ HS
Sbjct: 3807 LVVLE------GYKISKVACGSSHS 3825



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 12/228 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G   +   P L+   S   V+ + CG ++ +ALTS      G+V+
Sbjct: 639 EVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS-----NGEVY 693

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG+G+ G+LGHG   D   P  + FF GHR       +G   +  V+DSG +++ GDG 
Sbjct: 694 SWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGD 753

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G      +P  +   + ++V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 754 YGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTK---SGAVYTWGKGDNYRLG 810

Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
             ++D  R    P+    L   ++  I+       A++ +G LY WGR
Sbjct: 811 HGTEDHARH---PKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGR 855



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 30/326 (9%)

Query: 56  LSPQLLNLSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           LSP L  L+      ++       G H + LTS      G+VFSWG G  G+LGHG+  +
Sbjct: 604 LSPTLQQLNGFGDREVIRIASHPDGKHYMGLTS-----DGEVFSWGNGDGGKLGHGDYQN 658

Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
              P  +T   G +  +  I  G ++S  ++ +G +++ G G FG+LGHG     ++P+ 
Sbjct: 659 HEEPALITGLSGKQ--VAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPML 716

Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           +  F    +  +ACG   +  L     G  VY +G G  G+LG   +       P+V   
Sbjct: 717 LKFFKGHRIVDVACGSGDAQTLAVTDSG-AVYSWGDGDYGKLGRGGN--DGCKTPKVIEK 773

Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSFSQ 283
           L   ++V +      S AL+  G +YTWG+G N      +      P+ +   SS     
Sbjct: 774 LMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKD 833

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A+G  H + +T DGE+   G +  G L +P   + T P  +       ++G  +I +A 
Sbjct: 834 IAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIG-----GMEGKNIIGVAC 888

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFF 369
           G   +   T    W+   + S  PF 
Sbjct: 889 GPTQTFAWTSGGQWI---VSSRVPFI 911



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 20/275 (7%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P++++      V  +A GGAH   +T+      G+++
Sbjct: 4568 EVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITA-----NGELY 4622

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D   PK V     +R       +G   +  ++D   +++ GDG 
Sbjct: 4623 TWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGD 4682

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ +   + V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4683 YGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTK---SGSVYTWGKGDYHRLG 4739

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L + +++ ++       A +  G +++WG       G  +T+
Sbjct: 4740 HGSDDHVRR---PRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTN 4796

Query: 268  DVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEV 300
             +  P+ + S L    ++ A G  H L  + +  V
Sbjct: 4797 AIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 164/414 (39%), Gaps = 63/414 (15%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            ++W WG    GQLG         P      +++    L  G   + A+T+      GKVF
Sbjct: 4462 QIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAE-----GKVF 4516

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            + G G+ G+LG G      +P  +            +++G  H   +S  G +++ G+G 
Sbjct: 4517 ATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGE 4576

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
             G+LGHG+      P  + S   K V  IA G  HS  +  +    ++Y +G G+ G+L 
Sbjct: 4577 DGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITAN---GELYTWGKGRYGRLG 4633

Query: 214  -GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTW--------GRG 262
             G S+D+ R    P++   L    +V ++  +GD ++  ++ + ++++W        GRG
Sbjct: 4634 HGDSEDQPR----PKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4689

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +    V             +   G    + LT  G V   G   +  L         RP
Sbjct: 4690 GSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRP 4749

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  KVS L   KVI +A G+ H    T                          +   
Sbjct: 4750 -----RKVSALQNKKVIDVACGSLHCVACT--------------------------DTGE 4778

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 434
            + +WG  + GQLG G T     P++V   LG +  NR     V CGS  + A S
Sbjct: 4779 VFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKI-NR-----VACGSAHSLAWS 4826



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 94/241 (39%), Gaps = 48/241 (19%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +   V+ +G   + QLG  K     + LP +   L  +  V I         ++ EG +Y
Sbjct: 3462 IQTNVFCWGLNDKDQLGGPKGS--KIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVY 3519

Query: 258  TWGRGFN-------STSDVNCPQSLPSSLSF--SQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       +T  V+ P+ + S   +   + A+  G  H L LT DG+V   G  
Sbjct: 3520 ACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEG 3579

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R +  +P       +  L   +V  IA G+ HSA +T              
Sbjct: 3580 DDGKLGHFSRWNCDKP-----RLIEALKSKRVRDIACGSSHSAAITS------------- 3621

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 426
                         N  + TWG GE+G+LG G+   Q+ PK V    +    +  ++V CG
Sbjct: 3622 -------------NGDLYTWGLGEYGRLGHGDNTTQLKPKQV----KALAHERVVQVACG 3664

Query: 427  S 427
            S
Sbjct: 3665 S 3665



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   +GQLG G  +    P+L+       ++ +ACG AH LA ++  +V  GK+ 
Sbjct: 4778 EVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAVSAGKLP 4837

Query: 95   S 95
            S
Sbjct: 4838 S 4838


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 186/413 (45%), Gaps = 97/413 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++S+V  +ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTT-----GELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           SWG G+   G LGHG  V    PK V+   +G    + ++S G  H+  ++  G LFT G
Sbjct: 152 SWGDGTHNVGLLGHGNDVGHWIPKRVSGALEG--LQVAYVSCGTWHTALITSMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FG LGHGD +S S P +V S        +ACG+ H+  +                  
Sbjct: 210 DGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAI------------------ 251

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----ST 266
                                  +E+  I      S  LSA G L+TWG G         
Sbjct: 252 -----------------------VEV--IVTRSSSSVKLSA-GKLFTWGDGDKHRLGHGD 285

Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +     +  ++L    F + A G +  + LT  G+VL +G + +G L +P   S  R  
Sbjct: 286 KETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPH--SDGRIP 343

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  +K+    G +VIQIA G+ H AV+TG+                            +
Sbjct: 344 CLVEDKIV---GEQVIQIACGSYHVAVLTGR--------------------------NEV 374

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P +V +    ++R  +  + CG+ FT AI ++
Sbjct: 375 FTWGKGANGRLGHGDIEDRKVPTLVEV---LKDRAVRY-IACGANFTAAICQY 423


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 169/352 (48%), Gaps = 43/352 (12%)

Query: 29  EEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
           +E++   +++WG+G  GQLG G  +DE  PQ+        +    C      A T+ +  
Sbjct: 9   QEKEGGYLYTWGSGQFGQLGIGTQNDESLPQIAK-----EIDNEICTFTAAGANTTAAIT 63

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDA---LYPKPVT-FFDGHRYTITHISAGWNHSGFVSDS 144
            GG ++++G+G S QLGHG+  D    + P+ V   FDG   ++ + S    H   V++ 
Sbjct: 64  QGGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDG--LSVVNCSICDGHMAAVTED 121

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G ++T G GTFG+LGH +      P KV         ++ACG  H+L L  D    +V+ 
Sbjct: 122 GSVWTWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDD---GRVFA 177

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---- 260
           +G+ K G +GVS    R    PQ    L   +I+ ISA  + SAALSAE  +YTWG    
Sbjct: 178 WGNNKTGCVGVSD---RGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNY 234

Query: 261 ---------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                    R  +  + +   +++P      Q A G  H+L L+  GEV   G    G  
Sbjct: 235 GQLGLGQGARYISQPTRIRTLRNVP----IVQIACGQYHMLALSAAGEVYAWGQGLQGQT 290

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           ++ ++V +  P  +   K S     +V  IAAG  HSAVV  K    RLF +
Sbjct: 291 ANEKKVDTNIPHVIDALKES-----RVKMIAAGGSHSAVVDDKG---RLFTV 334



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 17/227 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW+WG GT G+LG   +H+   P+ +  L  +  V  +ACG  H LALT       G+VF
Sbjct: 124 VWTWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVK-VACGHVHTLALTDD-----GRVF 176

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG   +G +G  +      P+ +    G +  I  ISAG   S  +S    ++T G   
Sbjct: 177 AWGNNKTGCVGVSDR-GTCAPQEIESLRGKK--IIDISAGMESSAALSAEHEVYTWGADN 233

Query: 155 FGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G   R  S P ++ +  N  + QIACG  H L L       +VY +G G +GQ 
Sbjct: 234 YGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLAL---SAAGEVYAWGQGLQGQ- 289

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             + ++    ++P V   L +  +  I+A G  SA +  +G L+T G
Sbjct: 290 -TANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVG 335



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 44/266 (16%)

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
            + G L+T G G FGQLG G     S P       N+     A G   +  + +   G  
Sbjct: 11  KEGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQ---GGV 67

Query: 202 VYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
           ++ FG G   QLG   + D    V   +V      + +V  S      AA++ +G ++TW
Sbjct: 68  LWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTW 127

Query: 260 GRGF-----NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
           GRG      +   +   P+ +P    + F + A G  H L LT DG V   G +  G + 
Sbjct: 128 GRGTFGRLGHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVG 187

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             +R +       A +++ +L G K+I I+AG E SA ++ +                  
Sbjct: 188 VSDRGT------CAPQEIESLRGKKIIDISAGMESSAALSAEHE---------------- 225

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGN 398
                     + TWG   +GQLGLG 
Sbjct: 226 ----------VYTWGADNYGQLGLGQ 241



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 10/120 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           +V++WGA   GQLG G+    +S Q   + +L +V +  +ACG  H+LAL++      G+
Sbjct: 225 EVYTWGADNYGQLGLGQGARYIS-QPTRIRTLRNVPIVQIACGQYHMLALSAA-----GE 278

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WG+G  GQ  + + VD   P  +      R  +  I+AG +HS  V D G LFT G+
Sbjct: 279 VYAWGQGLQGQTANEKKVDTNIPHVIDALKESR--VKMIAAGGSHSAVVDDKGRLFTVGE 336


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  129 bits (323), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 117/427 (27%), Positives = 191/427 (44%), Gaps = 96/427 (22%)

Query: 35   KVWSWGAGTDGQLGTG-RLHDELS-PQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGG 91
            ++++WG+   GQLG G  ++  LS P+ ++     S + M+ CGG H +A+ S   V   
Sbjct: 1142 ELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFV--- 1198

Query: 92   KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
              +SWG    GQLGHG + V+   PK +    G +  I  I+AG+ H+  +  SG LF+ 
Sbjct: 1199 --YSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQK--IQAIAAGFAHNIVLKKSGELFSF 1254

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNK-----------NVHQIACGMRHSLVLLKDCLG 199
            G G FGQLG G + S + P ++   +N             + QIACG  HS++  ++   
Sbjct: 1255 GYGDFGQLGTGSFHSKNIPTRIE--INAIMGGLQHHDGGKITQIACGFGHSVICSEN--- 1309

Query: 200  NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             +VY +G GK+GQLG       ++S P++   L  +    IS     + A +   ++Y+W
Sbjct: 1310 GEVYSWGLGKQGQLG--HKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLKNVYSW 1365

Query: 260  GRG----FNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLT-------------- 295
            G G       +SD +  +S+P  + F      S+   G NH + +T              
Sbjct: 1366 GSGEHMKLGHSSDKD--ESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDED 1423

Query: 296  -------GDGEVLMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
                       +   G + HG L    D +     +P+  A++ V++L+   +I I+ G+
Sbjct: 1424 EENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLN---LIDISCGS 1480

Query: 346  EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            + SA++T                           N AI  WG G  GQ+G G   D   P
Sbjct: 1481 DFSAMIT--------------------------SNNAIYVWGCGRFGQIGNGKNDDVWVP 1514

Query: 406  KVVNLGD 412
              ++L D
Sbjct: 1515 TRISLND 1521



 Score =  112 bits (281), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 57/293 (19%)

Query: 17   INNAKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQL 60
            +N ++PK+ EE   Q++  +                +S+G G  GQLGTG  H +  P  
Sbjct: 1216 VNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTR 1275

Query: 61   LNLSSL---------SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
            + ++++           ++ +ACG  H +  +       G+V+SWG G  GQLGH    +
Sbjct: 1276 IEINAIMGGLQHHDGGKITQIACGFGHSVICSE-----NGEVYSWGLGKQGQLGHKVFEN 1330

Query: 112  ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
               P+ +    G    +T IS G  H+   +D   +++ G G   +LGH   +  S P  
Sbjct: 1331 ISKPRLIETLRG----VTKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKV 1386

Query: 172  VSSFVNKNVHQIACGMRHSLVL-LKDCLGNQ-----------------VYGFGSGKRGQL 213
            V  F+ KNV ++ CG  H++ +   D L N                  +Y +GS + G+L
Sbjct: 1387 VDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKL 1446

Query: 214  GVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            G+  D ++S      +P    G++ + ++ IS   D SA +++   +Y WG G
Sbjct: 1447 GLGGD-LKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCG 1498



 Score =  101 bits (252), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 104/391 (26%), Positives = 161/391 (41%), Gaps = 58/391 (14%)

Query: 72   LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTIT 129
            ++CG  H+  +T       G++++WG   SGQLGHG  V+     PK V FF G +  I 
Sbjct: 1127 VSCGWDHIAVITD-----DGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRG-KSPIF 1180

Query: 130  HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMR 188
             +  G  H+  V  +  +++ G   FGQLGHG    + S P  +     + +  IA G  
Sbjct: 1181 MVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFA 1240

Query: 189  HSLVLLKDCLGNQVYGFGSGKRGQLGV----SKDRIRSVSLPQVTIGL--HD-IEIVGIS 241
            H++VL K     +++ FG G  GQLG     SK+    + +  +  GL  HD  +I  I+
Sbjct: 1241 HNIVLKKS---GELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIA 1297

Query: 242  ANGDRSAALSAEGHLYTWGRGFNST------SDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
                 S   S  G +Y+WG G           +++ P+ + +    ++ + G  H +  T
Sbjct: 1298 CGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKISCGHFHTVATT 1357

Query: 296  GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
                V   G   H  L      SS +  SV           KV+        S VV G+ 
Sbjct: 1358 DLKNVYSWGSGEHMKLGH----SSDKDESVP----------KVVDFFIQKNVSKVVCGQN 1403

Query: 356  HWVRLFIISYTPFFPPFFINVIAENR-----------AIMTWGWGEHGQLGLGNTCDQ-I 403
            H       + T  FP    N   ++             I  WG  EHG+LGLG       
Sbjct: 1404 H-------TMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPF 1456

Query: 404  HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
              K +    +  N    +++ CGS F+  I+
Sbjct: 1457 FDKPIPTAIKGVNSLNLIDISCGSDFSAMIT 1487



 Score = 41.6 bits (96), Expect = 0.87,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 78/205 (38%), Gaps = 52/205 (25%)

Query: 238  VGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCPQSLPSSLSFSQAA-------L 286
            + +S   D  A ++ +G LYTWG           +VN   SLP  + F +          
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 287  GWNHVLVLTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
            G  H + +  +  V   G    G L    + V+ +RP     + +  L G K+  IAAG 
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRP-----KVIEELTGQKIQAIAAGF 1239

Query: 346  EHSAVV------------------TGKFHW----VRLFIIS------------YTPFFPP 371
             H+ V+                  TG FH      R+ I +             T     
Sbjct: 1240 AHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACG 1299

Query: 372  FFINVI-AENRAIMTWGWGEHGQLG 395
            F  +VI +EN  + +WG G+ GQLG
Sbjct: 1300 FGHSVICSENGEVYSWGLGKQGQLG 1324



 Score = 40.4 bits (93), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 31/128 (24%)

Query: 283  QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK-VIQI 341
            + + GW+H+ V+T DGE+   G +  G L     V+ T  L    ++V    G   +  +
Sbjct: 1126 KVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLP---KRVDFFRGKSPIFMV 1182

Query: 342  AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN-TC 400
              G EH+  V                            N  + +WG  + GQLG G    
Sbjct: 1183 ECGGEHTIAVD--------------------------SNYFVYSWGSDKFGQLGHGTKAV 1216

Query: 401  DQIHPKVV 408
            +Q  PKV+
Sbjct: 1217 NQSRPKVI 1224


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 182/415 (43%), Gaps = 102/415 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D L PQL+   S +++  +ACG  H  A+T     + G ++
Sbjct: 335 EIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVT-----LSGDLY 389

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    ++ IS G  H+  VS +G LFT G
Sbjct: 390 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVSSAGQLFTFG 447

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P +V S       Q ACG+ H+  +++  +GN         ++
Sbjct: 448 DGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKL 507

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG                            +GD+ A L            
Sbjct: 508 FTWGDGDKGRLG----------------------------HGDKEAKLVP---------- 529

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                   C  +L    +F Q A G +  +  T  G V  +G   +G L +P+   S   
Sbjct: 530 -------TCVSALVEP-NFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQ---SDGK 578

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           L   +E    L    V +IA GA H AV+T K                            
Sbjct: 579 LPARVE--GKLSRSSVEEIACGAYHVAVLTSKTE-------------------------- 610

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           + TWG G +G+LG G+T D+  P +V        +D Q++ + CG+ FT AI  H
Sbjct: 611 VYTWGKGANGRLGHGDTDDKNLPSLVE-----ALKDKQVKSIACGTNFTAAICLH 660


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 18/245 (7%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG   +GQLG G   D L PQ +      S+ M+A G  H  A+T       G++F WG 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTED-----GELFGWGW 55

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
           G  G LG G+  D L P+ V+  DG +  +  ++ GW H+  VS  G L+T G   +GQL
Sbjct: 56  GRYGNLGLGDRNDRLVPQKVSSVDGDKMVM--VACGWRHTISVSSLGGLYTYGWSKYGQL 113

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           GHGD+     P ++ +    N+ QI+ G RH++ L  D    ++YG+G  K GQ+G   D
Sbjct: 114 GHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD---GKLYGWGWNKFGQVGAG-D 169

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCP 272
            I   S  Q+     D +++ IS     + A++ + ++++WGRG N       + D N P
Sbjct: 170 NIDHCSPIQIKF-PQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTP 228

Query: 273 QSLPS 277
             L +
Sbjct: 229 MILEA 233



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 10/180 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG G  G LG G  +D L PQ ++      + M+ACG  H ++++S    +GG ++
Sbjct: 49  ELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSS----LGG-LY 103

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLGHG+  D L P  +    G    I+ IS GW H+  ++  G L+  G   
Sbjct: 104 TYGWSKYGQLGHGDFEDRLVPHRLEALRGD--NISQISGGWRHTMALTTDGKLYGWGWNK 161

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQ+G GD   H SP+++    ++ V QI+CG RH+L +        V+ +G G  GQLG
Sbjct: 162 FGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDK---QNVFSWGRGTNGQLG 218



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 119/260 (45%), Gaps = 26/260 (10%)

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR  +GQLG G   D+L P+ +  F+G   +I  ++AG  H+  V++ G LF  G G +
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEG--ISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LG GD      P KVSS     +  +ACG RH++ +    LG  +Y +G  K GQLG 
Sbjct: 59  GNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQLGH 115

Query: 216 S--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
              +DR+    +P     L    I  IS     + AL+ +G LY WG  +N    V    
Sbjct: 116 GDFEDRL----VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWG--WNKFGQVGAGD 169

Query: 274 SL----------PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           ++          P      Q + GW H L +T    V   G   +G L   E V    P+
Sbjct: 170 NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPM 229

Query: 324 SVALEKVSNLDGVKVIQIAA 343
              LE +S +DG    QI +
Sbjct: 230 --ILEALS-VDGCSGQQIES 246



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G    GQLG G   D L P  L      ++S ++ G  H +ALT+      GK++ 
Sbjct: 102 LYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD-----GKLYG 156

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G+ +D   P  + F    +  +  IS GW H+  V+D   +F+ G GT 
Sbjct: 157 WGWNKFGQVGAGDNIDHCSPIQIKFPQDQK--VIQISCGWRHTLAVTDKQNVFSWGRGTN 214

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLGHG+    ++P+ + + 
Sbjct: 215 GQLGHGESVDRNTPMILEAL 234



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 44/261 (16%)

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ +F   ++  +A G  H+  + +D    +++G+G G+ G LG+
Sbjct: 7   GQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTED---GELFGWGWGRYGNLGL 63

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                R V  PQ    +   ++V ++     + ++S+ G LYT+G       G     D 
Sbjct: 64  GDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDR 121

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +    + SQ + GW H + LT DG++   G +  G +   + +    P+ +  
Sbjct: 122 LVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKF 181

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +       KVIQI+ G  H+  VT K                          + + +WG
Sbjct: 182 PQDQ-----KVIQISCGWRHTLAVTDK--------------------------QNVFSWG 210

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG G + D+  P ++
Sbjct: 211 RGTNGQLGHGESVDRNTPMIL 231



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 30/111 (27%)

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
           S+  +K+   +G+ +  +AAGAEH+A VT                          E+  +
Sbjct: 17  SLVPQKIQAFEGISIKMVAAGAEHTAAVT--------------------------EDGEL 50

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
             WGWG +G LGLG+  D++ P+ V+  D     D  + V CG   T ++S
Sbjct: 51  FGWGWGRYGNLGLGDRNDRLVPQKVSSVDG----DKMVMVACGWRHTISVS 97


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 166/356 (46%), Gaps = 45/356 (12%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLS-SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           G  + G+LG G   ++  P+ +N++  +  VS       H LAL+       G+V+SWG 
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSD-----TGEVYSWGD 452

Query: 99  GSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
           G  G+LGHG++     PK +   F G    I  +SAG+ HS  V+  G L+T G+G  G+
Sbjct: 453 GDYGKLGHGDVATHKEPKLIQGPFIGK--VIELVSAGYRHSAAVTSDGQLYTWGEGDHGR 510

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LGHGD      P  V S  +  V  +ACG  H+L   +D  GN V+ FGSG  G+LG   
Sbjct: 511 LGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRD--GNTVWSFGSGDNGKLG-HG 567

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----STSDVNCP 272
           + IR +  PQ   GL   +I  ++A    S AL+  G ++TWG+G N     S   +  P
Sbjct: 568 NTIR-LYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSEITLFSP 626

Query: 273 QSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             +   +       ++G +H L LT +  V   G +  G         ST P+S    KV
Sbjct: 627 AVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGH---STSPVSRP-SKV 682

Query: 331 SNLDGVKVIQIAAGAEHSAVVT---------------------GKFHWVRLFIISY 365
            NL+G ++ QI+AG  HS   T                       F W+R FI  Y
Sbjct: 683 INLEGKQINQISAGTSHSVAWTTLPPDRQTNVWHSPFCIDLHESTFKWLRQFIEKY 738



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 147/334 (44%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-----SSVSMLACGGAHVLALTSPSSVIG 90
            V S G G  G+LG G  H +  P L  +S+L     + VS       H LALT       
Sbjct: 3447 VLSCGEGNYGRLGHG--HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTE-----T 3499

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G+VFSWG G  G+LGHG       PK + + +D     +  ++ G  HS  +S  G ++ 
Sbjct: 3500 GEVFSWGDGDFGKLGHGNNERQRKPKLIESLYD---VVVIQVACGHKHSAVLSQDGEVYV 3556

Query: 150  CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG-NQVYGFGSG 208
             G    G+LG G + +   P K+      N+  IACG  H++     C+G N V+ FG G
Sbjct: 3557 FGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTI-----CIGENVVWAFGEG 3611

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNSTS 267
            + G+LG+   +   + +PQ  I L+   I         +  LS +G LY+ G       +
Sbjct: 3612 EGGKLGIGSKK--DIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDAT 3669

Query: 268  DVNCPQSLPSSLSF-------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            DV   + L     F       +  A G +HVLVLT  G V   G +  G+L     +   
Sbjct: 3670 DVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQ 3729

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            +P+ + +     L    + QIA    H A  T +
Sbjct: 3730 KPMIIQI-----LSDKNIKQIATSRTHCAAWTAE 3758



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 152/338 (44%), Gaps = 42/338 (12%)

Query: 37   WSWGAGTDGQLG---TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            + WG G +GQLG    G+  +  SP  + + +      + CG      LTS      G V
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSP--IKIQNFKIAQRIVCGQNCTFVLTS-----QGTV 3447

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN---HSGFVSDSGCLFTC 150
             S G G+ G+LGHG   D+L P          + IT +S       HS  ++++G +F+ 
Sbjct: 3448 LSCGEGNYGRLGHGHS-DSL-PNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSW 3505

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            GDG FG+LGHG+      P  + S  +  V Q+ACG +HS VL +D    +VY FGS + 
Sbjct: 3506 GDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQD---GEVYVFGSAEH 3562

Query: 211  GQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
            G+LG    ++K R   +    V  G  +I+ +   A G        E  ++ +G      
Sbjct: 3563 GKLGLGGHINKKRPTKI----VHKGFLNIKYI---ACGQNHTICIGENVVWAFGEGEGGK 3615

Query: 262  -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             G  S  D+  PQ + +    +  +A  G    + L+ DGE+   G  +   L D   V 
Sbjct: 3616 LGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDN---LQDATDVL 3672

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
             T  L    EK+    G  V  +A G +H  V+T + H
Sbjct: 3673 YTEKL--IPEKIFEFQGQIVTDVATGPDHVLVLTARGH 3708



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 15/217 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G  +    P L+   S   V  +ACG  H LA +      G  V+
Sbjct: 499 QLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRD----GNTVW 554

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDG 153
           S+G G +G+LGHG  +    P+ +   +G R Y I  ++AG + S  ++ +G +FT G G
Sbjct: 555 SFGSGDNGKLGHGNTIRLYKPQKI---EGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQG 611

Query: 154 TFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           +   LG G    +  SP  V   + + +  I+ G  H L L ++C    VY +GS  +GQ
Sbjct: 612 S--NLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNC---AVYAWGSNGKGQ 666

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
            G        VS P   I L   +I  ISA    S A
Sbjct: 667 CG-QGHSTSPVSRPSKVINLEGKQINQISAGTSHSVA 702



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 148/361 (40%), Gaps = 58/361 (16%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            +VF WG  SS Q   G       P+ V         +  + AG   +  +   GC+  C
Sbjct: 342 SEVFMWGSNSSNQHAEGATEVTDIPRLVRSLSD----VQQVEAGQYCTFIIDTKGCVSAC 397

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGS 207
           G  ++G+LG G+  +   P +++  +N  + Q++       HSL L       +VY +G 
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRIN--INCKIKQVSSSKGCDGHSLALSD---TGEVYSWGD 452

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGRGFNST 266
           G  G+LG     + +   P++  G    +++ + + G R SAA++++G LYTWG G +  
Sbjct: 453 GDYGKLG--HGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGR 510

Query: 267 ---SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGMLSDPER 316
               D N P+ +P      S +     A G  H L  + DG  V   G   +G L     
Sbjct: 511 LGHGDCN-PRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNT 569

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHW------------VRLF 361
           +   +P     +K+  L   K+ ++AAG   S  +T     F W            + LF
Sbjct: 570 IRLYKP-----QKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSEITLF 624

Query: 362 IISYTP-FFPPFFINV---------IAENRAIMTWGWGEHGQLGLGNTCDQIH--PKVVN 409
             +          I++         +  N A+  WG    GQ G G++   +    KV+N
Sbjct: 625 SPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHSTSPVSRPSKVIN 684

Query: 410 L 410
           L
Sbjct: 685 L 685



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 19/231 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+L+       V  +ACG  H   L+       G+V+
Sbjct: 3501 EVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQ-----DGEVY 3555

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGD 152
             +G    G+LG G  ++   P  +     H+    I +I+ G NH+  + +   ++  G+
Sbjct: 3556 VFGSAEHGKLGLGGHINKKRPTKIV----HKGFLNIKYIACGQNHTICIGE-NVVWAFGE 3610

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  G+LG G  +    P ++ +   KN+ +  CG   ++ L +D    ++Y  GS     
Sbjct: 3611 GEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSED---GELYSCGS---DN 3664

Query: 213  LGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            L  + D + +  L P+         +  ++   D    L+A GH++ WG  
Sbjct: 3665 LQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNN 3715



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 107/292 (36%), Gaps = 98/292 (33%)

Query: 151  GDGTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G+G  GQLG    G   +  SP+K+ +F  K   +I CG   + VL        V   G 
Sbjct: 3398 GNGRNGQLGDTAVGQCINIWSPIKIQNF--KIAQRIVCGQNCTFVLTSQ---GTVLSCGE 3452

Query: 208  GKRGQLGVSKDRIRSVSLPQVTI--GLHDIEIVGISAN---GDRSAALSAEGHLYTWGRG 262
            G  G+LG       S SLP +T+   L    I  +S +      S AL+  G +++W   
Sbjct: 3453 GNYGRLGHG----HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSW--- 3505

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                                             GDG+   LG  ++     P+ + S   
Sbjct: 3506 ---------------------------------GDGDFGKLGHGNNERQRKPKLIES--- 3529

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                      L  V VIQ+A G +HSAV                          ++++  
Sbjct: 3530 ----------LYDVVVIQVACGHKHSAV--------------------------LSQDGE 3553

Query: 383  IMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            +  +G  EHG+LGLG   ++  P K+V+ G  F N      + CG   T  I
Sbjct: 3554 VYVFGSAEHGKLGLGGHINKKRPTKIVHKG--FLNIKY---IACGQNHTICI 3600


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 190/433 (43%), Gaps = 79/433 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  GQLG    ++  +P  + + +   +  +  G +  +ALT       G+V+S
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTH-----NGEVYS 105

Query: 96  WGRGSSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           WG+   G LGH + +  +   P+ +    G +  I  IS G  H   V++ G ++T G+ 
Sbjct: 106 WGKNKGGILGHEDRLSFNMTQPERIEKLLGKK--IKQISCGQFHMAAVTEDGEVYTWGNK 163

Query: 154 TFGQLGHG------------------DYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLL 194
            FG+LGH                   DY   S  P K+ S  N    Q+ACG++ ++VL 
Sbjct: 164 EFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS 223

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
           +D    +VY FG  + G LG   D+  SV+ PQ+   L+D  IV ISA     AA++ +G
Sbjct: 224 ED---GKVYTFGYNQYGSLGYVSDQ-NSVTTPQLIKDLND--IVKISAGYSFCAAITKQG 277

Query: 255 HLYTWGRGFNST--SDVNCPQSLPSSL-------SFSQAALGWNHVLVLTGDGEVLMLGG 305
            LYTWG   N    +  +  Q+ PS +       S    + G N +  LT  G++   G 
Sbjct: 278 KLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGF 337

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
              G L    +     P  V  ++       K+I+IA G  H+A +T             
Sbjct: 338 GGDGQLGHGNKSDLYAPRHVEFKQ-------KIIKIACGGSHAAFIT------------- 377

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLG-NTCDQIHPKVV-NLGDEFQNRDTQLEV 423
                        E+  +  +G G  GQLG+G N   +   +   NL   F+ +   ++V
Sbjct: 378 -------------EDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQV-VDV 423

Query: 424 FCGSGFTYAISRH 436
            CG   T AI++ 
Sbjct: 424 TCGGEHTIAITQE 436



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 15/168 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           K+++WG   +GQLG  +   +  P ++    S +S+  ++CG   + ALT       G++
Sbjct: 278 KLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQ-----GQL 332

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG G  GQLGHG   D   P+ V F    +  I  I+ G +H+ F+++   L+  G G
Sbjct: 333 YTWGFGGDGQLGHGNKSDLYAPRHVEF----KQKIIKIACGGSHAAFITEDNQLYQFGRG 388

Query: 154 TFGQLGHG-----DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           + GQLG G     +    S+P  V  F  K V  + CG  H++ + ++
Sbjct: 389 SEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 126/330 (38%), Gaps = 58/330 (17%)

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G     S   K  + +   V   A G  +  +L  +     VY +G G  GQLG+  
Sbjct: 7   LGLGKNIFRSGEFKKKAILGAGVCLTAGGFIYQSILANEYPETIVYSWGYGGFGQLGLQN 66

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------------FNS 265
           +   +   P     L D +I  + A    S AL+  G +Y+WG+             FN 
Sbjct: 67  E--NNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNM 124

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           T      + L   +   Q + G  H+  +T DGEV   G    G L   E +   + + +
Sbjct: 125 TQPERIEKLLGKKI--KQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKI 182

Query: 326 AL--------------EKVSNLDGVKVIQIAAGAEHSAVVT--GK---FHWVRLFIISY- 365
                           +K+ +L  +K  Q+A G + + V++  GK   F + +   + Y 
Sbjct: 183 KRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYV 242

Query: 366 -------TPFFPP------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
                  TP                 F   I +   + TWG   +GQLG   +  Q  P 
Sbjct: 243 SDQNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPS 302

Query: 407 VVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +V     F ++++ ++V CG  F  A+++ 
Sbjct: 303 IVT---GFGSQNSIVDVSCGDNFIAALTQQ 329


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 141/306 (46%), Gaps = 20/306 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G   D   P+ +       +  +ACG +H LA+T       G+V S
Sbjct: 88  VYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGD-----GEVHS 142

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR  +GQLG G   D L P  V  F+G    +  ++AG  H+  V++SG L+  G G +
Sbjct: 143 WGRNQNGQLGLGHTEDVLVPNKVAAFEG--IAVKMLAAGAEHTAAVTESGKLYGWGWGRY 200

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LG GD      P +V++   + ++ +ACG RH++ +     GN +Y FG  K GQLG 
Sbjct: 201 GNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANS--GN-LYTFGWSKYGQLG- 256

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                    +P     L +  I  +S     + AL  +G LY WG       G  +T D 
Sbjct: 257 -HGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDH 315

Query: 270 NCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           N P+ +   ++   ++   GW H + +T  G V   G    G L   + V    P  + L
Sbjct: 316 NSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIEL 375

Query: 328 EKVSNL 333
                L
Sbjct: 376 LSADGL 381



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 12/228 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L P  +      +V MLA G  H  A+T       GK++
Sbjct: 139 EVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTES-----GKLY 193

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P  V    G +  +  ++ GW H+  V++SG L+T G   
Sbjct: 194 GWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL--VACGWRHTIAVANSGNLYTFGWSK 251

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+  H  P +V +  NK +  ++ G RH++ L +D    ++YG+G  K GQ+G
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDED---GELYGWGWNKFGQVG 308

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
                    + P++  G+ + ++  ++     + A++  G++Y+WGRG
Sbjct: 309 CGN--TDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRG 354



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 156/376 (41%), Gaps = 58/376 (15%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  ++ G +H +AL S     G  V SWGRG  GQLGHG+  +   P  ++  D     I
Sbjct: 16  VISVSAGASHTVALLS-----GDLVCSWGRGEDGQLGHGDAEERHLPLVISALD--DCEI 68

Query: 129 THISAGWNHSGFVSDSG-CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           + I+ G +H+   S+S   +++ G G FG+LGHG+      P  +       + QIACG 
Sbjct: 69  SSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGD 128

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  D    +V+ +G  + GQLG+       V +P        I +  ++A  + +
Sbjct: 129 SHCLAITGD---GEVHSWGRNQNGQLGLG--HTEDVLVPNKVAAFEGIAVKMLAAGAEHT 183

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
           AA++  G LY WG       G    +D   P  + +      +  A GW H + +   G 
Sbjct: 184 AAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGN 243

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P  V   K       K IQ  +G     V         
Sbjct: 244 LYTFGWSKYGQLGHGDFEDHLVPHQVQALK------NKTIQAVSGGWRHTV--------- 288

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRD 418
                            + E+  +  WGW + GQ+G GNT D   PK++  + +E   R 
Sbjct: 289 ----------------ALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTR- 331

Query: 419 TQLEVFCGSGFTYAIS 434
               V CG   T AI+
Sbjct: 332 ----VTCGWRHTVAIT 343



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG    GQ+G G   D  SP+L+       V+ + CG  H +A+T       G V+
Sbjct: 295 ELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDR-----GNVY 349

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFF 121
           SWGRG+SGQLGHG+ VD   PK +   
Sbjct: 350 SWGRGTSGQLGHGDAVDRCVPKRIELL 376


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S +L++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3997 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4051

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4052 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4103

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4104 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4161

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4162 PERVTALEGYQIGQVACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSS--PQK 4217

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4218 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4277

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  + Q
Sbjct: 4278 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4332

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4333 ISAGRCHSAAWTA 4345



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3984 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4034

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4151

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4152 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4209

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4210 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4267

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4268 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4298

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4299 AWGSNSEGQLGLGHTNHVREPTLVTV 4324



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 29/266 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAG 344
             +        +  L G+ + ++ AG
Sbjct: 604 KPK-------VIEALQGMFIRKVCAG 622



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS---TGQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            ++  G G  GQL     R+   P    SF      Q+ CG   + V+  +     V   G
Sbjct: 3984 VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 4037

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
             G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 4038 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 264  ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 4098 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4154

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 4155 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVS---------------------- 4187

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
               A+   +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A++
Sbjct: 4188 ---ADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALT 4240

Query: 435  R 435
            +
Sbjct: 4241 K 4241



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S +L++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + QI+AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 4004 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4058

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4059 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4110

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4111 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4168

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
            P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 4169 PERVTALEGYQIGQVACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSS--PQK 4224

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
               L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 4225 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4284

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                A+G  H L L   G+V   G +  G L          P  V +     L G  + Q
Sbjct: 4285 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4339

Query: 341  IAAGAEHSAVVTG 353
            I+AG  HSA  T 
Sbjct: 4340 ISAGRCHSAAWTA 4352



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3991 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4041

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4042 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4158

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 4159 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4216

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 4217 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4274

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 4275 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 4305

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 4306 AWGSNSEGQLGLGHTNHVREPTLVTV 4331



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 29/266 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAG 344
             +        +  L G+ + ++ AG
Sbjct: 604 KPK-------VIEALQGMFIRKVCAG 622



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS---TGQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3985 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4036

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4093

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4094 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4129

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4130 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4166

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 4167 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4196

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4197 GSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4248



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 143/305 (46%), Gaps = 22/305 (7%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q   +V+SWG G  G+LG G  +D   PQ +   +  ++  +ACG  H LA+T       
Sbjct: 83  QPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDT----- 137

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++FS+GR  +GQLG G   DA+ P+PV    G    +T I+ G  HS   + +G +F  
Sbjct: 138 GELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQE--VTSIACGGEHSLAATSAGDVFAW 195

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG G       P +V       V  +ACG RHS+   +      VY FG  K 
Sbjct: 196 GWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADET---GAVYTFGWSKY 252

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
           GQLG   D I  + +P+    L D  IV I+     ++A    G LY+WG       G  
Sbjct: 253 GQLG-HGDCIDQL-VPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIG 310

Query: 265 STSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           S +D N P   Q L +S      + GW H   +T  G+V   G   +G L   E   +  
Sbjct: 311 SNTDSNAPVPVQGLNTS-PVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNA 369

Query: 322 PLSVA 326
           P+ +A
Sbjct: 370 PVRLA 374



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 165/378 (43%), Gaps = 60/378 (15%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V+ ++CG +H LAL S      G   SWGRG  GQLGHG+  +    KP   F   + + 
Sbjct: 16  VTSVSCGSSHSLALLS-----NGIALSWGRGEDGQLGHGDAEE--RKKPRAIFHLMQASC 68

Query: 129 THISAGWNHSGFVSD-SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           + + +G  +S  +S     +++ G G FG+LGHGD      P  + +   +N+ ++ACG 
Sbjct: 69  SAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGD 128

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H+L +       +++ FG  + GQLG+  + D I    LPQ    L   E+  I+  G+
Sbjct: 129 THTLAVTDT---GELFSFGRNQNGQLGLGTTSDAI----LPQPVESLRGQEVTSIACGGE 181

Query: 246 RSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSS------LSFSQAALGWNHVLVLTGD 297
            S A ++ G ++ WG G      V  P+   LPS       +  +  A GW H +     
Sbjct: 182 HSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADET 241

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           G V   G S +G L   + +    P     + V +L   +++ IA G  H++        
Sbjct: 242 GAVYTFGWSKYGQLGHGDCIDQLVP-----KAVESLKDSRIVLIAGGWRHTSAAD----- 291

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                                ++  + +WGW + GQLG+G+  D   P  V    +  N 
Sbjct: 292 ---------------------DSGKLYSWGWNKFGQLGIGSNTDSNAPVPV----QGLNT 326

Query: 418 DTQLEVFCGSGFTYAISR 435
                + CG   T+A++ 
Sbjct: 327 SPVKLLSCGWRHTFAVTE 344



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 154/377 (40%), Gaps = 52/377 (13%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           SWG G DGQLG G   +   P+ +     +S S +  G  + +AL+ P +    +V+SWG
Sbjct: 37  SWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRN----EVYSWG 92

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG+  D   P+P+    G    I  ++ G  H+  V+D+G LF+ G    GQ
Sbjct: 93  WGDFGRLGHGDCNDVFIPQPIRALAGR--NIVKVACGDTHTLAVTDTGELFSFGRNQNGQ 150

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G       P  V S   + V  IACG  HSL          V+ +G G+ G LGV  
Sbjct: 151 LGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATS---AGDVFAWGWGRYGNLGVGP 207

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
              R   LP    GL  +++  ++     S A    G +YT+G       G     D   
Sbjct: 208 PEDR--HLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLV 265

Query: 272 PQSLPSSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           P+++  SL  S+  L   GW H       G++   G +  G L       S  P+     
Sbjct: 266 PKAV-ESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPV----- 319

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
            V  L+   V  ++ G  H+  VT                          E   + +WG 
Sbjct: 320 PVQGLNTSPVKLLSCGWRHTFAVT--------------------------EAGDVFSWGR 353

Query: 389 GEHGQLGLGNTCDQIHP 405
           G +GQLG     D   P
Sbjct: 354 GVNGQLGHNEPKDTNAP 370



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 12/253 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++S+G   +GQLG G   D + PQ +       V+ +ACGG H LA TS      G VF
Sbjct: 139 ELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATS-----AGDVF 193

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  G LG G   D   P  V   +G +  +T ++ GW HS    ++G ++T G   
Sbjct: 194 AWGWGRYGNLGVGPPEDRHLPSQVHGLEGVK--VTSVACGWRHSIAADETGAVYTFGWSK 251

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD      P  V S  +  +  IA G RH+          ++Y +G  K GQLG
Sbjct: 252 YGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDS---GKLYSWGWNKFGQLG 308

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
           +  +   +  +P    GL+   +  +S     + A++  G +++WGRG N     N P+ 
Sbjct: 309 IGSNTDSNAPVP--VQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKD 366

Query: 275 LPSSLSFSQAALG 287
             + +  ++ ++G
Sbjct: 367 TNAPVRLAELSMG 379



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 12/210 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG G  G LG G   D   P  ++      V+ +ACG  H +A         G V++
Sbjct: 192 VFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADET-----GAVYT 246

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G    GQLGHG+ +D L PK V      R  I  I+ GW H+    DSG L++ G   F
Sbjct: 247 FGWSKYGQLGHGDCIDQLVPKAVESLKDSR--IVLIAGGWRHTSAADDSGKLYSWGWNKF 304

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
           GQLG G     ++PV V       V  ++CG RH+  + +      V+ +G G  GQLG 
Sbjct: 305 GQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTE---AGDVFSWGRGVNGQLGH 361

Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
              KD    V L ++++G   +E +G+SA+
Sbjct: 362 NEPKDTNAPVRLAELSMGSIKLEDLGVSAS 391



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 115/281 (40%), Gaps = 53/281 (18%)

Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
           +RS  S ++V+S        ++CG  HSL LL + +      +G G+ GQLG      R 
Sbjct: 7   FRSAVSDLRVTS--------VSCGSSHSLALLSNGI---ALSWGRGEDGQLGHGDAEER- 54

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWG------RGFNSTSDVNCPQSL 275
              P+    L       + +  + S ALS     +Y+WG       G    +DV  PQ +
Sbjct: 55  -KKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPI 113

Query: 276 P--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
              +  +  + A G  H L +T  GE+   G + +G L        T   ++  + V +L
Sbjct: 114 RALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLG-----LGTTSDAILPQPVESL 168

Query: 334 DGVKVIQIAAGAEHSAVVTG-----KFHWVRLFIISYTP----FFPP-------FFINVI 377
            G +V  IA G EHS   T       + W R   +   P      P          +  +
Sbjct: 169 RGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSV 228

Query: 378 A----------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A          E  A+ T+GW ++GQLG G+  DQ+ PK V
Sbjct: 229 ACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAV 269


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 163/347 (46%), Gaps = 38/347 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++  P+ L L    ++  VS       H LA+T+      G+
Sbjct: 422 VKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAE-----GE 476

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGCLFTC 150
           VFSWG G  G+LGHG      YPK      G      +  +SAG+ HS  V++ G L+T 
Sbjct: 477 VFSWGDGDYGKLGHGNSATQKYPK---IIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTW 533

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+G FG+LGH D  S + P  V       V Q+ACG  H++ + +D  G  V+ FG G  
Sbjct: 534 GEGDFGRLGHSDSHSRNVPTLVKDI--SGVGQVACGSSHTIAVAQD--GRIVWSFGGGDN 589

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNST 266
           G+LG        V  P+V   LH   I  + A    S AL++ G ++ WG     G  S+
Sbjct: 590 GKLG--HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 647

Query: 267 SDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRP 322
              +    L   LS ++    + G +H L L+ + EV   G +  G        +  T+P
Sbjct: 648 ETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKP 707

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS----AVVTGK--FHWVRLFII 363
                +KV  L+GV + QI AG  HS    AV T +    W R F +
Sbjct: 708 -----KKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCV 749



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 54/329 (16%)

Query: 35   KVWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
            +V+ WG G  GQL   GT      L+P      SLS    + CG      + +      G
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAP------SLSQTQQVVCGQNCTFLVQA-----NG 3909

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN---HSGFVSDSGCLF 148
             V + G GS G+LG G   D   P  ++   G  Y +T +   +    HS  ++++G +F
Sbjct: 3910 TVLAVGEGSYGRLGQGNSDDLYTPTIISALQG--YVVTQLVTSYGSDGHSLALTETGEVF 3967

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + GDG +G+LGHG+      P ++     + V Q+ACG +HS V+  D    +++ FGSG
Sbjct: 3968 SWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTAD---GKLFTFGSG 4024

Query: 209  KRGQLGVSKDRIRSVS---LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
              G+LG      RS S   +P+    L D   +G    G   A L               
Sbjct: 4025 DSGRLGQ-----RSTSNKMIPERVTAL-DGHHIGQRLIGLPDAML--------------- 4063

Query: 266  TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
              + N PQ +P+   +     A+G  H+L L+  G+V   G +    L     +  + P+
Sbjct: 4064 -KNHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLG----LGHSNPV 4118

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
               +  V+ L G  + QI+AG  HS+  T
Sbjct: 4119 KEPI-LVTTLQGKNIRQISAGRCHSSAWT 4146



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 28/279 (10%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+ WG  SS QL  G +   L PK    F   +     I AG   +  VS  G +  CG 
Sbjct: 372 VYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQM----IEAGQYCTFSVSADGAVKACGK 427

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGK 209
           G++G+LG GD  + S P K+     + + +++       H+L +  +    +V+ +G G 
Sbjct: 428 GSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAE---GEVFSWGDGD 484

Query: 210 RGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
            G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       G
Sbjct: 485 YGKLGHGNSATQKY--PKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLG 542

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL-MLGGSHHGMLSDPERVSSTR 321
            + +   N P  +       Q A G +H + +  DG ++   GG  +G L   +     R
Sbjct: 543 HSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYR 602

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHW 357
           P     + +  L G  + ++ AG++ S  +T     F W
Sbjct: 603 P-----KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAW 636



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 51/226 (22%)

Query: 200  NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG--------ISANGDRSAALS 251
            ++VY +G+G+ GQL    D   S S+P +   L   + V         + ANG   A   
Sbjct: 3860 SEVYLWGNGRHGQLA---DAGTSASVPTLAPSLSQTQQVVCGQNCTFLVQANGTVLAV-- 3914

Query: 252  AEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN-----HVLVLTGDGEVLMLGGS 306
             EG     G+G  ++ D+  P  + +   +    L  +     H L LT  GEV   G  
Sbjct: 3915 GEGSYGRLGQG--NSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDG 3972

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             +G L         RP     +++  L G +V+Q+A G +HSAVVT              
Sbjct: 3973 DYGKLGHGNSERQRRP-----KQIEGLQGEEVVQLACGFKHSAVVTA------------- 4014

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                         +  + T+G G+ G+LG  +T +++ P+ V   D
Sbjct: 4015 -------------DGKLFTFGSGDSGRLGQRSTSNKMIPERVTALD 4047



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 104/278 (37%), Gaps = 47/278 (16%)

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           +D+  ++  G  +  QL  G       P     F   +   I  G   +  +  D     
Sbjct: 367 NDTVMVYVWGSNSSHQLAEGTLEKILQPKLAQGF--SDAQMIEAGQYCTFSVSAD---GA 421

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWG 260
           V   G G  G+LG+     +S+    V      +  V  S   D  + A++AEG +++WG
Sbjct: 422 VKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWG 481

Query: 261 RG------FNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            G        +++    P+ +   L        + G+ H   +T DGE+   G    G L
Sbjct: 482 DGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRL 541

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
              +  S   P       V ++ GV   Q+A G+ H+                       
Sbjct: 542 GHSDSHSRNVP-----TLVKDISGVG--QVACGSSHT----------------------- 571

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             I V  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 572 --IAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIE 607


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 162/329 (49%), Gaps = 28/329 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
           +LG        V  P+V   L  + I  + A    S +L++ G +Y WG     G  S+ 
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE 650

Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                  L   L+ ++    ++G +H L L+ D EV   G +  G      + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +KVS LDG+ + Q++AG  HS   T 
Sbjct: 708 KP-KKVSGLDGIAIQQVSAGTSHSLAWTA 735



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 169/382 (44%), Gaps = 62/382 (16%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 3998 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4052

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 4053 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4104

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 4105 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4162

Query: 169  PVKVSSFVNKNVHQ---------IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
            P +V++     + Q         +ACG+ H+L +  D  G+ V+ FG G  G+LG+    
Sbjct: 4163 PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNST 4220

Query: 220  IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQ 273
             +S   PQ    L  I I  ++     S AL+ +G +YT+G+            + N PQ
Sbjct: 4221 AKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQ 4278

Query: 274  SLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
             +P  + +     A+G  H L LT  G++   G +  G L          P  V +    
Sbjct: 4279 QVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTV---- 4334

Query: 332  NLDGVKVIQIAAGAEHSAVVTG 353
             L G  V QI+AG  HSA  T 
Sbjct: 4335 -LQGKNVRQISAGRCHSAAWTA 4355



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 169/393 (43%), Gaps = 61/393 (15%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 3985 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4035

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 4036 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4095

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 4096 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4152

Query: 214  GVSK-------DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWG 260
            G+         +R+ ++   Q+    +   I  ++   + + A+SA+G +        +G
Sbjct: 4153 GLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYG 4212

Query: 261  R-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            + G  +++  + PQ +     +   + A G    + LT DG+V   G      L +    
Sbjct: 4213 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRAR 4272

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
            +  RP     ++V  L GV +  +A GAEH+  +T                         
Sbjct: 4273 NHNRP-----QQVPVLAGVVIEDVAVGAEHTLALTSTGD--------------------- 4306

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                 I  WG    GQLGLG+T     P +V +
Sbjct: 4307 -----IYAWGSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 29/266 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   D  RV 
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAG 344
             +        +  L G+ + ++ AG
Sbjct: 604 KPK-------VIEALQGMFIRKVCAG 622



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 129/306 (42%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD      P  + +     + ++  G + SL L       QVY +G G    
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS---TGQVYAWGCG--AC 643

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
           LG       ++  P++   L    IV IS       ALS +  +Y WG          NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T  +  P+ +     ++  Q + G +H L  T              +  D + V+  RP 
Sbjct: 703 TGPITKPKKVSGLDGIAIQQVSAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749

Query: 324 SVALEK 329
            V LE+
Sbjct: 750 CVDLEE 755



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 92/356 (25%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 3979 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4030

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 4031 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4087

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 4088 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4123

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 4124 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4160

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q    +   +V  G  H                 + V A+
Sbjct: 4161 KLP-----ERVTALEGYQIGQARNKSIICSVACGLNH----------------TLAVSAD 4199

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 4200 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4251



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 186/413 (45%), Gaps = 100/413 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++ +V ++ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTT-----SGELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LG+G  V    PK ++   +GH+  + ++S G  H+  V+  G LFT G
Sbjct: 152 TWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQ--VAYVSCGTWHTALVTSRGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHG+  S S P +V S        +ACG+ H+  +++  +          +++
Sbjct: 210 DGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLF 269

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G + +LG                            +GD+   L             
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPKLKP----------- 290

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                  C  SL     F + A G +  + LT  G+VL +G + +G L +P    S   L
Sbjct: 291 ------TCVASL-IDYDFCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPR---SDGKL 340

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
              +E   ++ G  V+Q+A G+ H AV+T K                            +
Sbjct: 341 PCLIE---DIMGEHVVQVACGSYHVAVLTNKSE--------------------------V 371

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+   K+  L +  ++R  +  + CGS FT AI +H
Sbjct: 372 FTWGKGANGRLGHGDVEDR---KIPTLVESLRDRAVR-HIACGSNFTSAICQH 420


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
            V + G G+ G+LG G   D     L  L+ +S++        + +CG   H +ALT    
Sbjct: 2694 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 2745

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 2746 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKL 2801

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G+  +   P +V++     + Q+ACG+ H+L +  D  G+ V+ FG 
Sbjct: 2802 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGD 2859

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG+     +S   PQ    L  I I  ++     S AL+ +GH+YT+G+      
Sbjct: 2860 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 2917

Query: 264  --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  + N PQ +P  + +     A+G  H L L   G+V   G +  G L        
Sbjct: 2918 PEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 2977

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              P  V +     L G  + QI+AG  HSA  T 
Sbjct: 2978 REPTLVTV-----LQGKNIRQISAGRCHSAAWTA 3006



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  ++CG  H   +TS      GK+F
Sbjct: 2748 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----DGKLF 2802

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
            ++G G  G+LG G   +   P+ VT  +G  Y I  ++ G NH+  VS  G + +  GDG
Sbjct: 2803 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 2860

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + SSP KV       + ++ACG + S+ L KD     VY FG  +   +
Sbjct: 2861 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 2915

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            G+ + R R+ + PQ    L  + I  ++   + + AL++ G +Y WG
Sbjct: 2916 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 2962



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 2645 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 2695

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 2696 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2755

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 2756 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 2812

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
            G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 2813 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 2871 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 2928

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 2929 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 2959

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNL 410
             WG    GQLGLG+T     P +V +
Sbjct: 2960 AWGSNSEGQLGLGHTNHVREPTLVTV 2985



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)

Query: 89   IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            +GGK  V+ WG G  GQL   G   MV A  P   +F    +     +  G N +  +  
Sbjct: 2639 LGGKCDVYLWGAGRHGQLAEAGRNVMVPATAP---SFSQAQQ-----VICGQNCTFVIQA 2690

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
            +G +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     
Sbjct: 2691 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 2747

Query: 201  QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  + DR R    P+    L   E+V                     
Sbjct: 2748 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 2783

Query: 260  GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                                   Q + G+ H  V+T DG++   G   +G L      + 
Sbjct: 2784 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 2820

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P     E+V+ L+G ++ Q+A G  H+  V+                         A+
Sbjct: 2821 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 2850

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A+++
Sbjct: 2851 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 2902


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 168/373 (45%), Gaps = 53/373 (14%)

Query: 10  EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
           E G++ ++    P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 167 EAGRNVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 221

Query: 57  SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
              L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 222 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 273

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                 P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 274 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 331

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
           P +V++     + Q+ACG+ H+L +  D  G+ V+ FG G  G+LG+     +S   PQ 
Sbjct: 332 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 387

Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
              L  I I  ++     S AL+ +GH+YT+G+            + N PQ +P  + + 
Sbjct: 388 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 447

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
               A+G  H L L   G+V   G +  G L          P  V +     L G  + Q
Sbjct: 448 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 502

Query: 341 IAAGAEHSAVVTG 353
           I+AG  HSA  T 
Sbjct: 503 ISAGRCHSAAWTA 515



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 56/386 (14%)

Query: 36  VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 154 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 204

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
           + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 205 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 264

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 265 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 321

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
           G+     +   LP+    L   +I  ++   + + A+SA+G +        +G+ G  ++
Sbjct: 322 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379

Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           +  + PQ +     +   + A G    + LT DG V   G      L +    +  RP  
Sbjct: 380 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 437

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
              +++  L GV +  +A GAEH+                            +A    + 
Sbjct: 438 ---QQIPVLAGVVIEDVAVGAEHTLA--------------------------LASTGDVY 468

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNL 410
            WG    GQLGLG+T     P +V +
Sbjct: 469 AWGSNSEGQLGLGHTNHVREPTLVTV 494



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 55/301 (18%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           ++  G G  GQL     R+   P    SF      Q+ CG   + V+  +     V   G
Sbjct: 154 VYLWGAGRHGQLAEAG-RNVMVPATAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 207

Query: 207 SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
            G  G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G   
Sbjct: 208 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 267

Query: 264 ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
              +  SD    Q  P  +         Q + G+ H  V+T DG++   G   +G L   
Sbjct: 268 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 324

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
              +   P     E+V+ L+G ++ Q+A G  H+  V+                      
Sbjct: 325 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVS---------------------- 357

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
              A+   +  +G G++G+LGLGN+  +  P+ V++      +    +V CG+ F+ A++
Sbjct: 358 ---ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALT 410

Query: 435 R 435
           +
Sbjct: 411 K 411


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 186/413 (45%), Gaps = 97/413 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++S+V  +ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTT-----GELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK ++   +G    + ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTYNVGLLGHGNDVGHWIPKRISGALEG--LQVAYVSCGTWHTALITSMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FG LGHGD +S S P +V S        +ACG+ H+  +                  
Sbjct: 210 DGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAI------------------ 251

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----ST 266
                                  +E+  I      S  LSA G L+TWG G         
Sbjct: 252 -----------------------VEV--IVTRSSSSVKLSA-GKLFTWGDGDKHRLGHGD 285

Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +     +  ++L    F + A G +  + LT  G+VL +G + +G L +P   S  R  
Sbjct: 286 KETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPH--SDGRIP 343

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  +K+    G +V+QIA G+ H AV+T +                            +
Sbjct: 344 CLVEDKIV---GEQVLQIACGSYHVAVLTNRSE--------------------------V 374

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+T D+   KV  L +  ++R  +  + CG+ FT AI ++
Sbjct: 375 FTWGKGANGRLGHGDTEDR---KVPTLVEALKDRAVRY-IACGANFTAAICQY 423


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 118/232 (50%), Gaps = 21/232 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++S+G G  G LG   L D   PQ LNL        +ACG  H LALT     I G +F
Sbjct: 41  QLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQ--KFVQVACGATHSLALT-----ISGIIF 93

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG+   GQLGHG   D L PK V   D       +I  G  HS FVS +  L+T G+G 
Sbjct: 94  SWGKNLRGQLGHGNQNDCLKPKEVIQND---IIAEYIDCGDQHSAFVSKNKELYTWGNGQ 150

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           + +LGHG       P KV    +  V  ++CGM H+L++  +     VY +G G  G+LG
Sbjct: 151 YYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGF---VYAWGDGMYGKLG 207

Query: 215 VSKDRIRSVSLPQVTIGL------HDIEIVGISANGDRSAALSAEGHLYTWG 260
           VS+D  ++ +LP   +G+       +     ++A    S ALS  G ++TWG
Sbjct: 208 VSED-CKTQTLP-TRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWG 257



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 139/310 (44%), Gaps = 47/310 (15%)

Query: 52  LHDELSPQLLNLSSL----SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
           ++ E   Q+ ++  L      +  +ACG  H L +         +++S+G G +G LG+ 
Sbjct: 2   MNKENKNQIYDIQELELQDKEIIYIACGHHHTLIIDE-----NNQLYSFGMGKTGLLGNE 56

Query: 108 EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167
            + D   P+ +      +     ++ G  HS  ++ SG +F+ G    GQLGHG+     
Sbjct: 57  HLEDVKIPQQLNL----KQKFVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCL 112

Query: 168 SPVKVSSFVNKNV--HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSV 223
            P +V   +  ++    I CG +HS  + K+    ++Y +G+G+  +LG  V+ D +   
Sbjct: 113 KPKEV---IQNDIIAEYIDCGDQHSAFVSKN---KELYTWGNGQYYRLGHGVTTDEL--- 163

Query: 224 SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV--NCP-QSLPSSL- 279
            +P+  + L D  +  +S   + +  ++ EG +Y WG G      V  +C  Q+LP+ + 
Sbjct: 164 -IPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVG 222

Query: 280 ----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML------SDPERVSSTRPL 323
                      + Q A G  H L L+ +G++   G S  G L         +  +  + +
Sbjct: 223 MICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKI 282

Query: 324 SVALEKVSNL 333
           S+ L K  NL
Sbjct: 283 SIKLNKDKNL 292



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 127/314 (40%), Gaps = 58/314 (18%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN--KNVHQIAC 185
           I +I+ G +H+  + ++  L++ G G  G LG+     H   VK+   +N  +   Q+AC
Sbjct: 23  IIYIACGHHHTLIIDENNQLYSFGMGKTGLLGN----EHLEDVKIPQQLNLKQKFVQVAC 78

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  HSL L    +   ++ +G   RGQLG     D ++   + Q     +DI    I   
Sbjct: 79  GATHSLAL---TISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ-----NDIIAEYIDCG 130

Query: 244 GDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
              SA +S    LYTWG G         T+D   P+ +        +  + G NH L++T
Sbjct: 131 DQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVT 190

Query: 296 GDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           G+G V   G   +G L   E   + T P  V +            Q+AAG+ HS      
Sbjct: 191 GEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLA---- 246

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD----QIHPKVVNL 410
                                 ++ N  I TWG  + G LG+G   D       P+ +++
Sbjct: 247 ----------------------LSTNGQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISI 284

Query: 411 GDEFQNRDTQLEVF 424
                N+D  L+ F
Sbjct: 285 K---LNKDKNLQFF 295



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 63/275 (22%)

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
           +K +  IACG  H+L++ ++   NQ+Y FG GK G LG   + +  V +PQ  + L   +
Sbjct: 20  DKEIIYIACGHHHTLIIDEN---NQLYSFGMGKTGLLG--NEHLEDVKIPQ-QLNLKQ-K 72

Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQ------- 283
            V ++     S AL+  G +++WG+      G  + +D   P+ +  +   ++       
Sbjct: 73  FVQVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEYIDCGDQ 132

Query: 284 --AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
             A +  N  L   G+G+   LG   HG+ +D           +  +KV  L+   V  +
Sbjct: 133 HSAFVSKNKELYTWGNGQYYRLG---HGVTTD----------ELIPKKVVVLEDYYVTHV 179

Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
           + G  H+ +VTG+                            +  WG G +G+LG+   C 
Sbjct: 180 SCGMNHTLIVTGE--------------------------GFVYAWGDGMYGKLGVSEDCK 213

Query: 402 -QIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            Q  P +V  +  +F+      +V  GS  + A+S
Sbjct: 214 TQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALS 248



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 81/214 (37%), Gaps = 43/214 (20%)

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQ 283
           + L D EI+ I+     +  +     LY++G G           DV  PQ L     F Q
Sbjct: 16  LELQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKFVQ 75

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A G  H L LT  G +   G +  G L    +    +P  V        + +    I  
Sbjct: 76  VACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ------NDIIAEYIDC 129

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI 403
           G +HSA V                          ++N+ + TWG G++ +LG G T D++
Sbjct: 130 GDQHSAFV--------------------------SKNKELYTWGNGQYYRLGHGVTTDEL 163

Query: 404 HP-KVVNLGDEFQNRDT----QLEVFCGSGFTYA 432
            P KVV L D +    +       +  G GF YA
Sbjct: 164 IPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYA 197



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYT 127
           +  ++C   H +A++       G+ + WG+    QLG G   +  Y P+ +      + T
Sbjct: 430 IRYISCSYLHAIAISQK-----GQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETK-T 483

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV-KVSSFVNKNVHQIACG 186
           I   +     S  ++D G ++T G    G LGH +   +  P  K+ + + + ++ IACG
Sbjct: 484 IIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMIY-IACG 542

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
            +  + +       Q+Y +G+   GQLG+   R
Sbjct: 543 PQGMVSI--SAHKRQLYAWGNNIYGQLGIKIYR 573


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 785  KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 839

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 840  VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 897

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 898  GEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 954

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P     L  I +V I      S AL+  G ++TWG+      G  
Sbjct: 955  GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 1012

Query: 265  STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 1013 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 1072

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 1073 ---AL--VIGLDAVFVNRVACGSSHS 1093



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+   +  SV+ +ACG AH  A+T+      G V 
Sbjct: 1904 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 1958

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 1959 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 2018

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 2019 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS---GAVYTWGKGDFHRLG 2075

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 2076 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 2132

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 2133 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 2173



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK V   +G   ++  I+ G
Sbjct: 1892 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 1944

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 2004

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + +V +      S AL+ 
Sbjct: 2005 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 2059

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 2060 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 2119

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 2120 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 2174

Query: 365  YTPF 368
              P 
Sbjct: 2175 NPPL 2178



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 170/419 (40%), Gaps = 65/419 (15%)

Query: 29   EEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSS 87
            E+     V  WG     QLG  +      P     +S L  + +   GG+  L + S   
Sbjct: 727  EQDLPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHI--AGGSKSLFIVSQD- 783

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSG 145
               GKV++ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G
Sbjct: 784  ---GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDG 838

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
             +F+ G+G  G+LGHG+  +   P  V +   K +  +ACG  HS  +       ++Y +
Sbjct: 839  KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTW 895

Query: 206  GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG-- 260
            G G+ G+LG   +  +    P++   L    +V + A G R A   AL+ +G +++WG  
Sbjct: 896  GLGEYGRLGHGDNATQLK--PKLVTALAGRRVVQV-ACGSRDAQTLALTEDGAVFSWGDG 952

Query: 261  ------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                  RG +  SD        S +   Q   G    L LT  GEV   G   +  L   
Sbjct: 953  DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 1012

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                  +P     + +  L G +VI +A GA H   VT                      
Sbjct: 1013 GDQHVRKP-----QPIGGLRGRRVIHVAVGALHCLAVT---------------------- 1045

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 1046 ----DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 1095



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 162/409 (39%), Gaps = 55/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            ++ WG    GQLG        +P      SL     LA G   + A+T       GK+F+
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 1853

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
             G GS G+LG G       P  +            +++G  H   ++  G ++  G+G  
Sbjct: 1854 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 1913

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
            G+LGHG+  S+  P  V      +V  IACG  HS  +        V  +G G+ G+L  
Sbjct: 1914 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITAS---GHVLTWGKGRYGRLGH 1970

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
            G S+D++R   L +  +G   I+I   S +  ++  ++ + ++++WG       G   + 
Sbjct: 1971 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 2028

Query: 268  DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  + S   L   +   G    + LT  G V   G      L         RP   
Sbjct: 2029 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 2085

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +KV+ L G K+I IA G+ H    +                          ++  + T
Sbjct: 2086 --KKVAALQGKKIISIATGSLHCVACS--------------------------DSGEVYT 2117

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            WG  + GQLG G       P++V      Q +   ++V CGS  T A+S
Sbjct: 2118 WGDNDEGQLGDGTVTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 2162


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 153/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 3080 KVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3134

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 3135 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3192

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P +V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3193 GEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3249

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +      + P     L  I ++ I      S AL+  G ++TWG+      G  
Sbjct: 3250 GKLG--RGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3307

Query: 265  STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3308 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3367

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3368 ---AL--VIGLDAVFVNRVACGSSHS 3388



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+   +  SV+ +ACG AH  A+TS      G V 
Sbjct: 4253 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITS-----SGHVL 4307

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4308 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4367

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4368 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4424

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 4425 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVT 4481

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 4482 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4522



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK V   +G   ++  I+ G
Sbjct: 4241 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4293

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4353

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + ++ +      S AL+ 
Sbjct: 4354 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4408

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4409 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4468

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4469 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4523

Query: 365  YTPF 368
              P 
Sbjct: 4524 NPPL 4527



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 18/241 (7%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFS 95
           +SWGAG D +LG G  H    P    +S+L   V  + CG ++  A+T       G +++
Sbjct: 637 YSWGAGEDHRLGHGDTHARAVPT--KISALDRCVKAVFCGCSYSAAIT-----WSGNLYT 689

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+ G+LGHG   D   P  V     +      + +G  HS  ++  G ++  GDG +
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK-RGQLG 214
           G+LG+G+  S   P+ V +     V +I  G + S+ L  +     +Y +G     G   
Sbjct: 750 GKLGNGNCNSSLQPILVETL--PRVQRIFAGAQSSMALTTE---GHLYSWGKASCLGHQQ 804

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
           V +  ++  S+P++   L    +V ++       AL++ G ++ WGR  N +  + CP S
Sbjct: 805 VERS-VQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGR--NDSQQI-CPSS 860

Query: 275 L 275
           +
Sbjct: 861 V 861



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 170/419 (40%), Gaps = 65/419 (15%)

Query: 29   EEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSS 87
            E++    V  WG     QLG  +      P     +S L  + +   GG+  L + S   
Sbjct: 3022 EQELPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHI--SGGSKSLFIVSQD- 3078

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSG 145
               GKVF+ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G
Sbjct: 3079 ---GKVFACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDG 3133

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
             +F+ G+G  G+LGHG+  +   P  V +   K +  +ACG  HS  +       ++Y +
Sbjct: 3134 KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTW 3190

Query: 206  GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG-- 260
            G G+ G+LG   D    +   QVT  L    ++ + A G R A   AL+ +G +++WG  
Sbjct: 3191 GLGEYGRLG-HGDNATQLKPKQVT-ALAGRRVIQV-ACGSRDAQTLALTEDGAVFSWGDG 3247

Query: 261  ------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                  RG +  S         S +   Q   G    L LT  GEV   G   +  L   
Sbjct: 3248 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3307

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                  +P     + +  L G +VI +A GA H   VT                      
Sbjct: 3308 GDQHVRKP-----QPIGGLRGRRVIHVAVGALHCLAVT---------------------- 3340

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 3341 ----DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 3390



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   RI++ +  +    L  +++ G    G++S  A++ +G L+  
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG----GEQSLFAVTPDGKLFAT 4203

Query: 260  GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
            G G      V    S  +P+ L   Q           G  H L LT +GEV   G    G
Sbjct: 4204 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4263

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R+S  RP     + V +L+G+ V  IA G+ HSA +T   H             
Sbjct: 4264 KLGHGNRMSYDRP-----KLVEHLNGMSVADIACGSAHSAAITSSGH------------- 4305

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                         ++TWG G +G+LG G++ DQ+ PK+V     ++     +++ CGSG
Sbjct: 4306 -------------VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR----AIDIACGSG 4347



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 20/218 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +++WG GT G+LG G   D+  P + + L+    + + L  G AH L LTS      G V
Sbjct: 687 LYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSE-----GLV 741

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG G  G+LG+G    +L P  V         +  I AG   S  ++  G L++ G  
Sbjct: 742 YAWGDGDYGKLGNGNCNSSLQPILVETLP----RVQRIFAGAQSSMALTTEGHLYSWGKA 797

Query: 154 TFGQLGHGDYRSH----SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           +   LGH          S P  VSS  +K +  +A G+ H L  L  C   +V+G+G   
Sbjct: 798 SC--LGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLA-LTSC--GEVFGWGRND 852

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
             Q+  S      +    + +GL  +   GI+    +S
Sbjct: 853 SQQICPSSVSCEPLLRLPILVGLPTLPASGIACTASQS 890



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 135/332 (40%), Gaps = 58/332 (17%)

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            ++ WG    GQLG  E      P P       R     ++ G      V+  G LF  G 
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV--QLAGGEQSLFAVTPDGKLFATGY 4205

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+ G+LG G   S + P  + S  +  V ++A   G +H L L  +    +VY +G G+ 
Sbjct: 4206 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE---GEVYAWGEGED 4262

Query: 211  GQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
            G+LG    +S DR      P++   L+ + +  I+     SAA+++ GH+ TWG+G    
Sbjct: 4263 GKLGHGNRMSYDR------PKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR 4316

Query: 263  --FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
                 + D   P+ + + L +    +    G    L +T D  V   G   +G L     
Sbjct: 4317 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4376

Query: 317  VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
                 P      K+ +L G+ VI++  G++ S  +T                        
Sbjct: 4377 DGCKLPY-----KIESLAGLGVIKVECGSQFSVALT------------------------ 4407

Query: 377  IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              ++ A+ TWG G+  +LG G+      PK V
Sbjct: 4408 --KSGAVYTWGKGDFHRLGHGSVDHVRRPKKV 4437


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 166/382 (43%), Gaps = 59/382 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL--SPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++ WG  ++GQLG G    E   +P+LL NL   S+V  ++CG  H   L        G 
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCK-----DGT 55

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G    GQLG     +  +  P +      +TIT ++ G  H+  VSD G +F  GD
Sbjct: 56  VYTCGSNEFGQLGQ----EKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGD 111

Query: 153 GTFGQLGHGDY---RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            ++GQ+G G     +  + P  +      +V QIACG  HS+ L    +   ++ +G   
Sbjct: 112 NSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMAL---TISGHLFCWGDNS 168

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG+ K    S+S P   + L+ +  + ISA G  S ALS+ G L+ WG+      G 
Sbjct: 169 SGQLGIGKTH-SSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGV 227

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           + T+D   P  L S  S      + G  H  VLT DG V   G    G L          
Sbjct: 228 HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT 287

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P      KV  L G  V QIA G  H+                         + ++  + 
Sbjct: 288 P-----RKVFELMGSVVTQIACGRAHT-------------------------LALVPSSG 317

Query: 382 AIMTWGWGEHGQLGLG--NTCD 401
            + T+G G  GQLGLG  N C+
Sbjct: 318 RVYTFGRGGDGQLGLGVTNNCN 339



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 8/136 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG     D   P LL       V  ++CG  H   LTS      G VF+
Sbjct: 214 LFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTS-----DGGVFT 268

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G G+SGQLGH        P+ V  F+     +T I+ G  H+   V  SG ++T G G 
Sbjct: 269 FGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGG 326

Query: 155 FGQLGHGDYRSHSSPV 170
            GQLG G   + +SP+
Sbjct: 327 DGQLGLGVTNNCNSPM 342


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 162/334 (48%), Gaps = 27/334 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
           V++ G    GQ G G   +   ++  +  LS ++ +SM+A   G  H+LA+ S      G
Sbjct: 518 VFTCGLNKSGQCGNGTFEERVIIATPVRALSGIA-ISMVAAANGCEHMLAVAS-----DG 571

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            VFSWG    GQLG G  +   +   +      +Y IT  +  ++HS  VS +G L T G
Sbjct: 572 AVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFG 631

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
               GQLG    +   +P  V +  ++ V + ACG+ H++    D    +VY FG    G
Sbjct: 632 MNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSD---GEVYSFGKNDYG 688

Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLG+   R I++ +L + ++G  D +IV +S     +  +S +G L TWGR      G  
Sbjct: 689 QLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 748

Query: 265 STSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--SST 320
           S    N  Q   LP S     A+ G  H L+L  +G V++ G ++ G L    R   S+ 
Sbjct: 749 SKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSAD 808

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            PL V    ++N    +V++IAAG   S ++TG+
Sbjct: 809 LPLPVPSNSLAN---DEVVRIAAGFYSSYILTGR 839



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 11/211 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++ ++G    GQLG      + +PQ+++  S   V+  ACG  H +A TS      G+V+
Sbjct: 626 ELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATS-----DGEVY 680

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           S+G+   GQLG G   +   P  V T        I  +S G+ H+  +S+ G L T G  
Sbjct: 681 SFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRN 740

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLG G     +S   V   ++  +   +CG  HSL+L+ +    +V  FG   +GQL
Sbjct: 741 DYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSN---GRVMVFGRNNKGQL 797

Query: 214 GVSKDRIRS--VSLPQVTIGLHDIEIVGISA 242
           G     + S  + LP  +  L + E+V I+A
Sbjct: 798 GAGARTLSSADLPLPVPSNSLANDEVVRIAA 828



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 52/322 (16%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           ++FS G+ + G+L  G        + V FF      I  ++ G      V + G +FTCG
Sbjct: 465 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAK--GIRDVAGGNEVLAVVMNDGGVFTCG 522

Query: 152 DGTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
               GQ G+G +      ++PV+  S +  ++   A G  H L +  D     V+ +G  
Sbjct: 523 LNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASD---GAVFSWGYN 579

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR------ 261
            RGQLG+    I     P++   L +   I   + +   SA +S+ G L T+G       
Sbjct: 580 DRGQLGLGST-ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQL 638

Query: 262 GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G + T   + PQ +   SS   ++AA G  H +  T DGEV   G + +G L        
Sbjct: 639 GLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQL-------- 690

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPPFFINV 376
                  L    N+    +++ + G     +V    G +H V                  
Sbjct: 691 ------GLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTV-----------------T 727

Query: 377 IAENRAIMTWGWGEHGQLGLGN 398
           I+E   ++TWG  ++GQLG+G+
Sbjct: 728 ISEKGKLITWGRNDYGQLGIGS 749



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 24/171 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGG 91
           +V+S+G    GQLG G   +  +P L+  S   S   +  ++CG  H + ++       G
Sbjct: 678 EVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISE-----KG 732

Query: 92  KVFSWGRGSSGQLGHG----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           K+ +WGR   GQLG G    +      P P++        I + S G  HS  +  +G +
Sbjct: 733 KLITWGRNDYGQLGIGSKEHKNSAQFVPLPMS------SKIKNASCGCYHSLILMSNGRV 786

Query: 148 FTCGDGTFGQLGHGDYRSHSS-----PVKVSSFVNKNVHQIACGMRHSLVL 193
              G    GQLG G  R+ SS     PV  +S  N  V +IA G   S +L
Sbjct: 787 MVFGRNNKGQLGAG-ARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 836


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT-----LDGK 3093

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3151

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3208

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P     L  I +V I      S AL+  G ++TWG+      G  
Sbjct: 3209 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266

Query: 265  STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3267 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3326

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3327 ---AL--VIGLDAVFVNRVACGSSHS 3347



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+   +  SV+ +ACG AH  A+T+      G V 
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4210

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4211 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4327

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 4328 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 4384

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 4385 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4425



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK V   +G   ++  I+ G
Sbjct: 4144 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4196

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + +V +      S AL+ 
Sbjct: 4257 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4311

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4372 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4426

Query: 365  YTPF 368
              P 
Sbjct: 4427 NPPL 4430



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +SWG G D +LG G  H    P  +       V  + CG ++  A+T      GG + +
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLT 691

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+  +LGHG   D   P  V     H      + +G  HS  ++  G +F  GDG +
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+G+      P+ V S     V ++  G + S+ L  +    Q+Y +G        +
Sbjct: 752 GKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSE---GQLYTWGKATCLGHQL 806

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +  ++  S+P++   L    IV ++ +     ALS+ G ++ WGR  N +  + CP S+
Sbjct: 807 VERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASV 863

Query: 276 PS 277
            S
Sbjct: 864 SS 865



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 145/354 (40%), Gaps = 54/354 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKV++ G G++G+LG G   +   P  +     +      + +G  H+  ++  G +F+ 
Sbjct: 3038 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+G  G+LGHG+  +   P  V +   K +  +ACG  HS  +       ++Y +G G+ 
Sbjct: 3098 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGLGEY 3154

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG------- 260
            G+LG   +  +    P++   L    +V + A G R A   AL+ +G +++WG       
Sbjct: 3155 GRLGHGDNTTQLK--PKLVTALAGRRVVQV-ACGSRDAQTLALTEDGAVFSWGDGDFGKL 3211

Query: 261  -RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             RG +  SD        S +   Q   G    L LT  GEV   G   +  L        
Sbjct: 3212 GRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             +P     + +  L G +VI +A GA H   VT                          +
Sbjct: 3272 RKP-----QPIGGLRGRRVIHVAVGALHCLAVT--------------------------D 3300

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
               +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 3301 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 3349



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 7/157 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G      +P  +   S   V  + CG    LALT       G+V++
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR-----AGEVWT 3254

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+P+    G R  + H++ G  H   V+D+G ++  GD   
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRR--VIHVAVGALHCLAVTDAGQVYAWGDNDH 3312

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            GQ G G+   +  P  V       V+++ACG  HS+ 
Sbjct: 3313 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 163/409 (39%), Gaps = 55/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            ++ WG    GQLG        +P      SL     LA G   + A+T       GK+F+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4105

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
             G GS G+LG G       P  +            +++G  H   ++  G ++  G+G  
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
            G+LGHG+  S+  P  V      +V  IACG  HS  +        V  +G G+ G+L  
Sbjct: 4166 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4222

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
            G S+D++R   L +  +G   I+I   S +  ++  ++ + ++++WG       G   + 
Sbjct: 4223 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4280

Query: 268  DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  + S   L   +   G    + LT  G V   G      L         RP   
Sbjct: 4281 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4337

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +KV+ L G K+I IA         TG  H V                   +++  + T
Sbjct: 4338 --KKVAALQGKKIISIA---------TGSLHCV-----------------ACSDSGEVYT 4369

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            WG  + GQLG G       P++V      Q +   ++V CGS  T A+S
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 4414



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 93/238 (39%), Gaps = 51/238 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            V  +G   + QLG +   +++  +  Q    L  I I G    G +S   +S +G +Y  
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 3043

Query: 260  GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
            G G N       T +V  P  LP    +    +    G  H L LT DG+V   G    G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R +  +P       V  L   K+  +A G+ HSA ++ +               
Sbjct: 3104 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGE------------- 3145

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                         + TWG GE+G+LG G+   Q+ PK+V        R   ++V CGS
Sbjct: 3146 -------------LYTWGLGEYGRLGHGDNTTQLKPKLVT---ALAGRRV-VQVACGS 3186


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 167/386 (43%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+ + GQLG G + DE  L+P  +  +  ++V  +ACG  H L LT+      GK
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTA-----NGK 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G     QLGH    D    +P+   +   Y I  IS G  HS  +SD G + + GD
Sbjct: 61  VYACGSNDHSQLGH----DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH  D      P  V   V+K V QIACG  HSL  L  C   ++Y +GS   G
Sbjct: 117 NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173

Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLGV+  + +   + P     L  I +  I+  G+ S  +S  G ++ WGR      G N
Sbjct: 174 QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             ++   P  L +  +L     A G    + LT +G V   G   +G L      +   P
Sbjct: 234 DETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  V  L G  + Q+A G  H+                         + ++     
Sbjct: 294 -----RMVMELMGSTITQVACGNRHT-------------------------LALVPSRGR 323

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  +G G  GQLG  +T   + P+VV
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG     D       L L++L  + +  +ACGG H   ++       G
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            VF WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VY FG G  G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 142/330 (43%), Gaps = 48/330 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          +  ++ G  H+ F++ +G ++ 
Sbjct: 4   GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYA 63

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG     QLGH        P+ +    +  + QI+CG RHSL L       QV  +G   
Sbjct: 64  CGSNDHSQLGHD--LPTKRPLLIPELQDYVIIQISCGSRHSLALSD---WGQVLSWGDND 118

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG + D+   + LP+V   L    +V I+   + S AL++ G LY+WG       G 
Sbjct: 119 CGQLGHATDK-EIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           NS  D+   N P  L + L    AA+  G NH  +++  G V   G ++ G L   +  +
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P      ++  L  + V  +A G E S  +T +                        
Sbjct: 238 RAYP-----TQLKTLRTLGVRFVACGDEFSVFLTNE------------------------ 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
               + T G G +GQLG G + +++ P++V
Sbjct: 269 --GGVFTCGAGAYGQLGHGFSSNEMLPRMV 296


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 178/410 (43%), Gaps = 75/410 (18%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D   P+ L    +  V  +ACGG H + +T P     G++FSWG  S G+LGHG   D  
Sbjct: 285 DAFLPKALESKVVLDVHYIACGGRHAVLVTKP-----GEIFSWGEESGGRLGHGIKADVP 339

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
            PK +    G    I  ++ G NH+  V+ SG L+T GDG +  G LGHG   SH  P +
Sbjct: 340 NPKLIDTLAG--MNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKR 397

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           +   +   +V  ++CG  H+  +       Q++ FG G  G LG       S ++P+   
Sbjct: 398 IGGDMEGIHVSYVSCGPWHTAAVTS---VGQLFTFGDGTFGALGHGDHS--SATVPREVE 452

Query: 231 GLHDIEIVGISANGDRSAA---LSAE------------GHLYTWGRG--FNSTSDVNCPQ 273
            L  +  + +S     +AA   ++ E            G L+TWG G  +        P+
Sbjct: 453 TLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPR 512

Query: 274 SLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  +      +  Q A G N  L LT  G V  +G + +G L +P R +   P  V  
Sbjct: 513 LFPECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNP-RATGKVPAIVE- 570

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                + G  + +IA G+ H AV+T K                       AE   + TWG
Sbjct: 571 ---GKIAGKIIEEIACGSYHVAVLTSK-----------------------AE---VYTWG 601

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            G +GQLG G+  D+  P VV+       RD Q+  V CGS FT  I  H
Sbjct: 602 KGTNGQLGHGDNKDRNQPTVVDF-----LRDKQVRAVACGSNFTAIICLH 646



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 35/339 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D  +P+L++  +  ++ ++ACG  H  A+T       G ++
Sbjct: 318 EIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAVT-----FSGDLY 372

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +WG G+   G LGHG       PK +   D     ++++S G  H+  V+  G LFT GD
Sbjct: 373 TWGDGAYNCGLLGHGSEASHWIPKRIGG-DMEGIHVSYVSCGPWHTAAVTSVGQLFTFGD 431

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------------ 200
           GTFG LGHGD+ S + P +V +       +++CG+ H+   ++    +            
Sbjct: 432 GTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFG 491

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-- 258
           +++ +G+G   +LG      R    P+  + L D  I  ++   + + AL+A G +YT  
Sbjct: 492 KLFTWGNGDEYRLGHGDKEPR--LFPECVVALGDENICQVACGHNLTLALTAAGRVYTMG 549

Query: 259 ---WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
              +G+  N  +    P  +   ++     + A G  HV VLT   EV   G   +G L 
Sbjct: 550 STSYGQLGNPRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLG 609

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             +     +P  V       L   +V  +A G+  +A++
Sbjct: 610 HGDNKDRNQPTVVDF-----LRDKQVRAVACGSNFTAII 643



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 133/361 (36%), Gaps = 92/361 (25%)

Query: 91  GKVFSWGRGSSGQ----------LGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNH 137
           G VF WG G              +     VDA  PK +      D H     +I+ G  H
Sbjct: 255 GDVFFWGEGVGDGILGGGVHITGITSSPKVDAFLPKALESKVVLDVH-----YIACGGRH 309

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           +  V+  G +F+ G+ + G+LGHG      +P  + +    N+  +ACG  H+  +    
Sbjct: 310 AVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAVT--- 366

Query: 198 LGNQVYGFGSGKR--GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEG 254
               +Y +G G    G LG   +   S  +P+   G +  I +  +S     +AA+++ G
Sbjct: 367 FSGDLYTWGDGAYNCGLLGHGSE--ASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVG 424

Query: 255 HLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            L+T+                                    GDG    LG   H   + P
Sbjct: 425 QLFTF------------------------------------GDGTFGALGHGDHSSATVP 448

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
             V + R             G++ I+++ G  H+A              S +  F   F 
Sbjct: 449 REVETLR-------------GLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLF- 494

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYAI 433
                     TWG G+  +LG G+   ++ P+ VV LGDE        +V CG   T A+
Sbjct: 495 ----------TWGNGDEYRLGHGDKEPRLFPECVVALGDE-----NICQVACGHNLTLAL 539

Query: 434 S 434
           +
Sbjct: 540 T 540


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 160/337 (47%), Gaps = 34/337 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D L P+L++  S +++ ++ACG  H  A+T     + G ++
Sbjct: 332 EIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVT-----LSGDLY 386

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    ++ IS G  H+  V+ SG LFT G
Sbjct: 387 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 444

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P +V S         ACG+ H+  +++  +GN         ++
Sbjct: 445 DGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKL 504

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      + V  P     L D     ++     + AL+  GH+YT    
Sbjct: 505 FTWGDGDKGRLGHGDKEAKLV--PTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSP 562

Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N  +D   P  +   L+ S   + A G  HV VLT   EV   G   +G L   
Sbjct: 563 VYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 622

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +      P  V       L   +V  IA G   +A +
Sbjct: 623 DTDDRNSPTLVEA-----LKDKQVKSIACGTNFTATI 654



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 183/406 (45%), Gaps = 70/406 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H   +T       G++FSWG  S G+LGHG   D L
Sbjct: 299 DSLLPKALESAVVLDVQNIACGGRHAALVTKQ-----GEIFSWGEESGGRLGHGVDSDVL 353

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P +
Sbjct: 354 HPKLIDSLSN--TNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 411

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG------VSKDR-IRSV 223
           V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG      VSK R + S+
Sbjct: 412 VNGPLEGIHVSSISCGPWHTAVVTS---SGQLFTFGDGTFGVLGHGDTKSVSKPREVESL 468

Query: 224 SLPQVTIGL----HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST-----SDVNCPQS 274
              +  I      H   +V I   G+ S++  + G L+TWG G          +     +
Sbjct: 469 KGHRTVISACGVWHTAAVVEIMV-GNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 527

Query: 275 LPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
             ++L   +F + A G +  + LT  G V  +G   +G L +P+      P  V  +   
Sbjct: 528 CVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPTRVEGKLAK 586

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +     V +IA GA H AV+T +                            + TWG G +
Sbjct: 587 SF----VEEIACGAYHVAVLTSRTE--------------------------VYTWGKGAN 616

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           G+LG G+T D+  P +V        +D Q++ + CG+ FT  I  H
Sbjct: 617 GRLGHGDTDDRNSPTLVE-----ALKDKQVKSIACGTNFTATICLH 657


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 121/239 (50%), Gaps = 20/239 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G   +GQLG G  +D LSPQL+       VS +ACG  H LA T       G VFS
Sbjct: 137 LYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEA-----GTVFS 191

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G LG G+  D   P  V   DG   T+T +  GW HS  V+D G +FT G   +
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTRVVGLDG--VTVTSVVCGWRHSAVVTDEGRVFTFGWSKY 249

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLGHGD+  H+ P  V+   +  V  +A G RH++    D  GN +Y +G  K GQLG+
Sbjct: 250 GQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMA--ADSEGN-LYAWGWNKFGQLGL 306

Query: 216 SKDRIRSVSLPQVTIGLHDI---------EIVGISANGDR-SAALSAEGHLYTWGRGFN 264
                R+   P    GL              V + A G R + A++  G +Y+WGRG N
Sbjct: 307 GDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVN 365



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 38/325 (11%)

Query: 9   TEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS 68
           T+ G  A++  A+  +       Q+   +SWG G  G+LG G   D   P+ +   S   
Sbjct: 60  TDAGVDAVVCGAEYTVAVASSRGQI---YSWGWGDFGRLGHGECGDVFVPRPIAFFSGRP 116

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V+ +ACG  H L +T       G ++++GR  +GQLG G   D L P+ VT   G R  +
Sbjct: 117 VARVACGDTHTLVVTQGD----GALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGER--V 170

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
           + ++ G  HS   +++G +F+ G G +G LG GD +   +P +V       V  + CG R
Sbjct: 171 SSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWR 230

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDR 246
           HS V+  +    +V+ FG  K GQLG     D  R    P +  GL    +  ++     
Sbjct: 231 HSAVVTDE---GRVFTFGWSKYGQLGHGDHVDHTR----PCLVAGLQHCRVSTVAGGWRH 283

Query: 247 SAALSAEGHLYTWG------RGFNSTSDVNCPQSLP--------------SSLSFSQAAL 286
           + A  +EG+LY WG       G   + D   P  +               +    +  A 
Sbjct: 284 TMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLAC 343

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGML 311
           GW H + +T  GEV   G   +G L
Sbjct: 344 GWRHTVAVTEAGEVYSWGRGVNGQL 368



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 158/382 (41%), Gaps = 53/382 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G+     SP  +   + + V  + CG  + +A+ S      G+++S
Sbjct: 31  VASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSR----GQIYS 86

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD-SGCLFTCGDGT 154
           WG G  G+LGHGE  D   P+P+ FF G    +  ++ G  H+  V+   G L+T G   
Sbjct: 87  WGWGDFGRLGHGECGDVFVPRPIAFFSGR--PVARVACGDTHTLVVTQGDGALYTFGRNQ 144

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G      SP  V++   + V  +ACG  HSL   +      V+ +G G+ G LG
Sbjct: 145 NGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE---AGTVFSWGWGRYGNLG 201

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFNST 266
               + R    P   +GL  + +  +      SA ++ EG ++T+        G G +  
Sbjct: 202 DGDSQDRYT--PTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD 259

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLS 324
               C  +       S  A GW H +    +G +   G +  G   L D E  ++  P++
Sbjct: 260 HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVA 319

Query: 325 -----VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
                    +       +V  +A G  H+  VT                          E
Sbjct: 320 GFGLAGGGVEAGAATPRRVALLACGWRHTVAVT--------------------------E 353

Query: 380 NRAIMTWGWGEHGQLGLGNTCD 401
              + +WG G +GQLG G   D
Sbjct: 354 AGEVYSWGRGVNGQLGHGAEQD 375



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 144/354 (40%), Gaps = 67/354 (18%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD--------- 122
           ++CG +H +AL        G V SWGRG  GQLGHG+      P  +             
Sbjct: 15  VSCGSSHSIALLDC-----GVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVC 69

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           G  YT+             S  G +++ G G FG+LGHG+      P  ++ F  + V +
Sbjct: 70  GAEYTVA----------VASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVAR 119

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           +ACG  H+LV+ +      +Y FG  + GQLG+          PQ+   L    +  ++ 
Sbjct: 120 VACGDTHTLVVTQG--DGALYTFGRNQNGQLGLGH--TNDCLSPQLVTALQGERVSSVAC 175

Query: 243 NGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVL 294
             + S A +  G +++WG G         + D   P  +     ++ +    GW H  V+
Sbjct: 176 GSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVV 235

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           T +G V   G S +G L   + V  TRP  VA      L   +V  +A G  H+     +
Sbjct: 236 TDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVA-----GLQHCRVSTVAGGWRHTMAADSE 290

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +                          +  WGW + GQLGLG++ D+  P  V
Sbjct: 291 GN--------------------------LYAWGWNKFGQLGLGDSEDRAAPTPV 318


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 152/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 3114 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3168

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  I+ G +HS  +S  G L+T G 
Sbjct: 3169 VFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGELYTWGL 3226

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3227 GEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3283

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +      S P     L  I ++ I      S AL+  G ++TWG+      G  
Sbjct: 3284 GKLG--RGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3341

Query: 265  STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3342 GDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3401

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3402 ---AL--VIGLDAVIVNRVACGSSHS 3422



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 31/295 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+   +  SV+ +ACG AH  A+T+      G V 
Sbjct: 4321 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4375

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4376 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4435

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4436 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4492

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 +  V  P+    L   +I+ I+       A S  G ++TWG       G  + + 
Sbjct: 4493 --HGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTA 4550

Query: 269  VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 4551 IQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4590



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK V   +G   ++  I+ G
Sbjct: 4309 GGKHCLALTT-----DGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4361

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4421

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + ++ +      S AL+ 
Sbjct: 4422 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4476

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4477 SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWG 4536

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4537 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4591

Query: 365  YTPF 368
              P 
Sbjct: 4592 NPPL 4595



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 16/248 (6%)

Query: 37  WSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +SWG G   +LG G  H  EL  ++ +L  L  V  + CG ++  A+T     +GG +++
Sbjct: 668 YSWGVGDSRRLGHGDCHARELPTKIESLVRL--VKSVYCGCSYSAAIT-----LGGNLYT 720

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+ G+LGHG   D   P  V     H+     + +G  H+  ++  G +F  GDG +
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+G   S   P  +       V ++  G + SL L   C G Q+Y +G        +
Sbjct: 781 GKLGNGSCNSSLLPQLIDCL--PRVQRVFAGAQFSLAL--SCEG-QLYSWGKASCLGHQL 835

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +  ++  S+P++  GL    IV ++       ALS+ G ++ WGR  N      CP S+
Sbjct: 836 VERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI---CPASV 892

Query: 276 PSSLSFSQ 283
            S     Q
Sbjct: 893 CSEPLLRQ 900



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 148/356 (41%), Gaps = 58/356 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLF 148
            GKV++ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G +F
Sbjct: 3113 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDGKVF 3170

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + G+G  G+LGHG+  +   P  V +   K +  IACG  HS  +       ++Y +G G
Sbjct: 3171 SWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQ---GELYTWGLG 3227

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG----- 260
            + G+LG   +  +    P++   L    ++ + A G R A   AL+ +G +++WG     
Sbjct: 3228 EYGRLGHGDNATQLK--PKLVAALSGRRVIQV-ACGSRDAQTLALTEDGAVFSWGDGDFG 3284

Query: 261  ---RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               RG +  S         S +   Q   G    L LT  GEV   G   +  L      
Sbjct: 3285 KLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3344

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P     + ++ L G +VI +A GA H   VT                         
Sbjct: 3345 HVRKP-----QPIAGLRGHRVIHVAVGALHCLAVT------------------------- 3374

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
             +   +  WG  +HGQ G GNT     P  V+ L     NR     V CGS  + A
Sbjct: 3375 -DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVIVNR-----VACGSSHSMA 3424



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G      +P  +   S   V  + CG    LALT       G+V++
Sbjct: 3275 VFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTR-----AGEVWT 3329

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+P+    GHR  + H++ G  H   V+D+G ++  GD   
Sbjct: 3330 WGKGDYYRLGHGGDQHVRKPQPIAGLRGHR--VIHVAVGALHCLAVTDAGQVYAWGDNDH 3387

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQ G G+   +  P  V       V+++ACG  HS+
Sbjct: 3388 GQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSM 3423



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   RI++ +  +    L  +++ G    G++S  A++ +G L+  
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG----GEQSLFAVTPDGKLFAT 4271

Query: 260  GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
            G G      V    S  +P+ L   Q           G  H L LT DGEV   G    G
Sbjct: 4272 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4331

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R+S  RP     + V +L+G+ V  IA G+ HSA +T   H             
Sbjct: 4332 KLGHGNRMSYDRP-----KLVEHLNGMSVADIACGSAHSAAITASGH------------- 4373

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                         ++TWG G +G+LG G++ DQ+ PK+V     ++     +++ CGSG
Sbjct: 4374 -------------VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR----AIDIACGSG 4415



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 161/409 (39%), Gaps = 55/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            ++ WG    GQLG        +P      SL     LA G   + A+T       GK+F+
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4270

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
             G GS G+LG G       P  +            +++G  H   ++  G ++  G+G  
Sbjct: 4271 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGED 4330

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
            G+LGHG+  S+  P  V      +V  IACG  HS  +        V  +G G+ G+LG 
Sbjct: 4331 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4387

Query: 215  -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTS 267
              S+D++R   L +  +G   I+I   S +  ++  ++ + ++++WG G         + 
Sbjct: 4388 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4445

Query: 268  DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  + S   L   +   G    + LT  G V   G      L         RP   
Sbjct: 4446 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRP--- 4502

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +KV+ L G K+I IA G+ H    +                          +   + T
Sbjct: 4503 --KKVAALQGKKIISIATGSLHCVACS--------------------------DAGEVFT 4534

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            WG  + GQLG G       P++V      Q +   ++V CGS  T A+S
Sbjct: 4535 WGDNDEGQLGDGTVTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 4579



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +++WG GT G+LG G   D+  P + + L     V + L  G AH L LTS      G V
Sbjct: 718 LYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSE-----GLV 772

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG G  G+LG+G    +L P+ +         +  + AG   S  +S  G L++ G  
Sbjct: 773 FAWGDGDYGKLGNGSCNSSLLPQLIDCLP----RVQRVFAGAQFSLALSCEGQLYSWGKA 828

Query: 154 TF--GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +    QL   + +  S P  ++   +K +  +A G+ H L L       +++G+G     
Sbjct: 829 SCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSS---SGEIFGWGRNDNQ 885

Query: 212 QL 213
           Q+
Sbjct: 886 QI 887



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 90/236 (38%), Gaps = 47/236 (19%)

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            V  +G   + QLG  K     V +P  +  +  +  + I+        +S +G +Y  G 
Sbjct: 3063 VMVWGLNDKEQLGGLKGS--KVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3120

Query: 262  GFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML 311
            G N       T +V  P  LP    +    +    G  H L LT DG+V   G    G L
Sbjct: 3121 GTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKL 3180

Query: 312  SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                R +  +P       V  L   K+  IA G+ HSA ++ +                 
Sbjct: 3181 GHGNRSTLDKP-----RLVEALRAKKIRDIACGSSHSAAISSQGE--------------- 3220

Query: 372  FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                       + TWG GE+G+LG G+   Q+ PK+V        R   ++V CGS
Sbjct: 3221 -----------LYTWGLGEYGRLGHGDNATQLKPKLVA---ALSGRRV-IQVACGS 3261


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 2694 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 2748

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 2749 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 2806

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 2807 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 2863

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P     L  I +V I      S AL+  G ++TWG+      G  
Sbjct: 2864 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 2921

Query: 265  STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 2922 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 2981

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 2982 ---AL--VIGLDAVFVNRVACGSSHS 3002



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +SWG G D +LG G  H    P  +       V  + CG ++  A+T      GG + +
Sbjct: 291 AYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLT 345

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+  +LGHG   D   P  V     H      + +G  HS  ++  G +F  GDG +
Sbjct: 346 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 405

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+G+      P+ V S     V ++  G + S+ L  +    Q+Y +G        +
Sbjct: 406 GKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSE---GQLYTWGKATCLGHQL 460

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +  ++  S+P++   L    IV ++ +     ALS+ G ++ WGR  N +  + CP S+
Sbjct: 461 VERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASV 517

Query: 276 PS 277
            S
Sbjct: 518 SS 519



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 149/356 (41%), Gaps = 58/356 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLF 148
            GKV++ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G +F
Sbjct: 2693 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDGKVF 2750

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + G+G  G+LGHG+  +   P  V +   K +  +ACG  HS  +       ++Y +G G
Sbjct: 2751 SWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGLG 2807

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG----- 260
            + G+LG   +  +    P++   L    +V + A G R A   AL+ +G +++WG     
Sbjct: 2808 EYGRLGHGDNTTQLK--PKLVTALAGRRVVQV-ACGSRDAQTLALTEDGAVFSWGDGDFG 2864

Query: 261  ---RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               RG +  SD        S +   Q   G    L LT  GEV   G   +  L      
Sbjct: 2865 KLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 2924

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P     + +  L G +VI +A GA H   VT                         
Sbjct: 2925 HVRKP-----QPIGGLRGRRVIHVAVGALHCLAVT------------------------- 2954

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
             +   +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 2955 -DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 3004



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 7/157 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G      +P  +   S   V  + CG    LALT       G+V++
Sbjct: 2855 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR-----AGEVWT 2909

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+P+    G R  + H++ G  H   V+D+G ++  GD   
Sbjct: 2910 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRR--VIHVAVGALHCLAVTDAGQVYAWGDNDH 2967

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            GQ G G+   +  P  V       V+++ACG  HS+ 
Sbjct: 2968 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3004



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 93/238 (39%), Gaps = 51/238 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            V  +G   + QLG +   +++  +  Q    L  I I G    G +S   +S +G +Y  
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 2698

Query: 260  GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
            G G N       T +V  P  LP    +    +    G  H L LT DG+V   G    G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R +  +P       V  L   K+  +A G+ HSA ++ +               
Sbjct: 2759 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGE------------- 2800

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                         + TWG GE+G+LG G+   Q+ PK+V        R   ++V CGS
Sbjct: 2801 -------------LYTWGLGEYGRLGHGDNTTQLKPKLVT---ALAGRRV-VQVACGS 2841


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 11/228 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG   +GQLG G   D L P  L      SV MLA G  H  A+T      GGK++
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD-----GGKLY 184

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D + P  V      +  +  ++ GW H+  VS SG L+T G   
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCM--VACGWRHTIAVSQSGKLYTYGWSK 242

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGDY  H  P +V++    N+ Q++ G RH++ L +     ++YG+G  K GQ+G
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE---AGKLYGWGWNKFGQVG 299

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            S D     S   ++I      +V +S     + A++ + ++Y+WGRG
Sbjct: 300 -SGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRG 346



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 168/381 (44%), Gaps = 53/381 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V S+G G DGQLG G   D   P+++   +   +S++ACG  H  A ++    I    +S
Sbjct: 26  VCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTI----YS 81

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G    I  I+ G +H   V+  G +++ G    
Sbjct: 82  WGWGDFGRLGHGNSSDLFVPHPIKALQG--LEIRQIACGDSHCLAVTADGEVYSWGRNQN 139

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F   +V  +A G  H+  +     G ++YG+G G+ G LG+
Sbjct: 140 GQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD---GGKLYGWGWGRYGNLGL 196

Query: 216 SK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTS 267
               DR+    +P V     D ++  ++     + A+S  G LYT+G       G    +
Sbjct: 197 GDRGDRMLPAEVPAVG----DEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA 252

Query: 268 DVNCPQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D   P  + +   F  +Q + GW H + LT  G++   G +  G +   +    T P  +
Sbjct: 253 DHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLI 312

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
           ++         +V+Q++ G  H+  VT K +                          + +
Sbjct: 313 SIPGQHQ----RVVQVSCGWRHTVAVTDKNN--------------------------VYS 342

Query: 386 WGWGEHGQLGLGNTCDQIHPK 406
           WG G  GQLG G+  D+  PK
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPK 363



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 167/381 (43%), Gaps = 55/381 (14%)

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
           ++    V +++ G +H +AL S     G  V S+GRG  GQLGHG+  D   P+ +   +
Sbjct: 1   MAGERKVLLVSAGASHTVALLS-----GQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALN 55

Query: 123 GHRYTITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
                I+ ++ G +H + + +    +++ G G FG+LGHG+      P  + +     + 
Sbjct: 56  --DCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIR 113

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
           QIACG  H L +  D    +VY +G  + GQLG+  D   S+ +P   +    + +  ++
Sbjct: 114 QIACGDSHCLAVTAD---GEVYSWGRNQNGQLGLG-DTDDSL-VPHKLLAFEGVSVKMLA 168

Query: 242 ANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLV 293
           A  + +AA++  G LY WG       G     D   P  +P+         A GW H + 
Sbjct: 169 AGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIA 228

Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           ++  G++   G S +G L   +      P      +V+ L    + Q++ G  H+  +T 
Sbjct: 229 VSQSGKLYTYGWSKYGQLGHGDYADHLLP-----HQVAALAEFNITQVSGGWRHTVALT- 282

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                    E   +  WGW + GQ+G G+  D   P+++++  +
Sbjct: 283 -------------------------EAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQ 317

Query: 414 FQNRDTQLEVFCGSGFTYAIS 434
            Q     ++V CG   T A++
Sbjct: 318 HQR---VVQVSCGWRHTVAVT 335



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           Q  K++++G    GQLG G   D L P  +   +  +++ ++ G  H +ALT       G
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEA-----G 285

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           K++ WG    GQ+G G++ D   P+ ++   G    +  +S GW H+  V+D   +++ G
Sbjct: 286 KLYGWGWNKFGQVGSGDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSF 175
            GT GQLGHGD    S+P  + + 
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQAL 368


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 1885 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 1939

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 1940 VFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKK--IRDVACGSSHSAAISSQGELYTWGL 1997

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 1998 GEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTED---GSVFSWGDGDF 2054

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P     L  I ++ I      S AL+  G ++TWG+      G  
Sbjct: 2055 GKLG--RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 2112

Query: 265  STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 2113 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 2172

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 2173 ---AL--VIGLDAVFVNRVACGSSHS 2193



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+   +  +V+ +ACG AH  A+T+      G V 
Sbjct: 3084 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA-----SGHVL 3138

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L P+ V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 3139 TWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 3198

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +  G   +LG
Sbjct: 3199 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWSKGDFHRLG 3255

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 3256 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 3312

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 3313 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 3353



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 131/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK V   +G    +  I+ G
Sbjct: 3072 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MNVADIACG 3124

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 3125 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 3184

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + ++ +      S AL+ 
Sbjct: 3185 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 3239

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTW +G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 3240 SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 3299

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 3300 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 3354

Query: 365  YTPF 368
              P 
Sbjct: 3355 NPPL 3358



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 150/356 (42%), Gaps = 58/356 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLF 148
            GKV++ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G +F
Sbjct: 1884 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDGKVF 1941

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + G+G  G+LGHG+  +   P  V +  +K +  +ACG  HS  +       ++Y +G G
Sbjct: 1942 SWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQ---GELYTWGLG 1998

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG----- 260
            + G+LG   +  +    P++   L    ++ + A G R A   AL+ +G +++WG     
Sbjct: 1999 EYGRLGHGDNATQLK--PKLVAALAGRRVIQV-ACGSRDAQTLALTEDGSVFSWGDGDFG 2055

Query: 261  ---RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               RG +  SD        S +   Q   G    L LT  GEV   G   +  L      
Sbjct: 2056 KLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 2115

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P     + +  L G +VI +A GA H   VT                         
Sbjct: 2116 HVRKP-----QPIGGLRGRRVIHVAVGALHCLAVT------------------------- 2145

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
             +   +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 2146 -DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 2195



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 7/157 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G      +P  +   S   V  + CG    LALT       G+V++
Sbjct: 2046 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTR-----AGEVWT 2100

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+P+    G R  + H++ G  H   V+D+G ++  GD   
Sbjct: 2101 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRR--VIHVAVGALHCLAVTDAGQVYAWGDNDH 2158

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            GQ G G+   +  P  V       V+++ACG  HS+ 
Sbjct: 2159 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 161/409 (39%), Gaps = 55/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            ++ WG    GQLG        +P      SL     LA G   + A+T       GK+F+
Sbjct: 2979 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 3033

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
             G GS G+LG G       P  +            +++G  H   ++  G ++  G+G  
Sbjct: 3034 TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 3093

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
            G+LGHG+  S+  P  V      NV  IACG  HS  +        V  +G G+ G+L  
Sbjct: 3094 GKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 3150

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
            G S+D++R   L +  +G   I+I   S +  ++  ++ + ++++WG       G   + 
Sbjct: 3151 GDSEDQLRP-QLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 3208

Query: 268  DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  + S   L   +   G    + LT  G V          L         RP   
Sbjct: 3209 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRP--- 3265

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +KV+ L G K+I IA G+ H    +                          ++  + T
Sbjct: 3266 --KKVAALQGKKIISIATGSLHCVACS--------------------------DSGEVYT 3297

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            WG  + GQLG G       P++V      Q +   ++V CGS  T A+S
Sbjct: 3298 WGDNDEGQLGDGTVTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 3342



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 92/238 (38%), Gaps = 51/238 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTW 259
            V  +G   + QLG +   +++  +  Q    L  I I G    G +S  +  + G +Y  
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVGQNGKVYAC 1889

Query: 260  GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
            G G N       T +V  P  LP    +    +    G  H L LT DG+V   G    G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R +  +P       V  L   K+  +A G+ HSA ++ +               
Sbjct: 1950 KLGHGNRTTLDKP-----RLVETLRSKKIRDVACGSSHSAAISSQGE------------- 1991

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                         + TWG GE+G+LG G+   Q+ PK+V        R   ++V CGS
Sbjct: 1992 -------------LYTWGLGEYGRLGHGDNATQLKPKLVA---ALAGRRV-IQVACGS 2032


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 168/381 (44%), Gaps = 53/381 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V S+G G DGQLG G   D L P+++   +   +S++ACG  H  A ++    I    +S
Sbjct: 26  VCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTI----YS 81

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P P+    G    I  I+ G +H   V+  G +++ G    
Sbjct: 82  WGWGDFGRLGHGNSSDLFVPHPIKALQG--LEIRQIACGDSHCLAVTADGEVYSWGRNQN 139

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P K+ +F   +V  +A G  H+  +       ++YG+G G+ G LG+
Sbjct: 140 GQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDS---GKLYGWGWGRYGNLGL 196

Query: 216 SK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTS 267
               DR+    +P V     D ++  ++     + A+S  G LYT+G       G    +
Sbjct: 197 GDRGDRMLPAEVPAVG----DEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA 252

Query: 268 DVNCPQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D   P  + +   F  +Q + GW H + LT  G++   G +  G +   +    T P  +
Sbjct: 253 DHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLI 312

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
           ++         +V+Q++ G  H+  VT K +                          + +
Sbjct: 313 SIPGQHQ----RVVQVSCGWRHTVAVTDKNN--------------------------VYS 342

Query: 386 WGWGEHGQLGLGNTCDQIHPK 406
           WG G  GQLG G+  D+  PK
Sbjct: 343 WGRGTSGQLGHGDAVDRSAPK 363



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 119/228 (52%), Gaps = 11/228 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG   +GQLG G   D L P  L      SV MLA G  H  A+T       GK++
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDS-----GKLY 184

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D + P  V      +  +  ++ GW H+  VS SG L+T G   
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCM--VACGWRHTIAVSQSGKLYTYGWSK 242

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGDY  H  P +V++    N+ Q++ G RH++ L +     ++YG+G  K GQ+G
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE---AGKLYGWGWNKFGQVG 299

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            S D     S   ++I      +V +S     + A++ + ++Y+WGRG
Sbjct: 300 -SGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRG 346



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 55/375 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V S+GRG  GQLGHG+  D L P+ +   +     I
Sbjct: 7   VLLVSAGASHTVALLS-----GQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALN--DCEI 59

Query: 129 THISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           + ++ G +H + + +    +++ G G FG+LGHG+      P  + +     + QIACG 
Sbjct: 60  SLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGD 119

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  D    +VY +G  + GQLG+  D   S+ +P   +    + +  ++A  + +
Sbjct: 120 SHCLAVTAD---GEVYSWGRNQNGQLGLG-DTDDSL-VPHKLLAFEGVSVKMLAAGAEHT 174

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
           AA++  G LY WG       G     D   P  +P+         A GW H + ++  G+
Sbjct: 175 AAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G S +G L   +      P      +V+ L    + Q++ G  H+  +T       
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLP-----HQVAALAEFNITQVSGGWRHTVALT------- 282

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                              E   +  WGW + GQ+G G+  D   P+++++  + Q    
Sbjct: 283 -------------------EAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQR--- 320

Query: 420 QLEVFCGSGFTYAIS 434
            ++V CG   T A++
Sbjct: 321 VVQVSCGWRHTVAVT 335



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           Q  K++++G    GQLG G   D L P  +   +  +++ ++ G  H +ALT       G
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEA-----G 285

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           K++ WG    GQ+G G++ D   P+ ++   G    +  +S GW H+  V+D   +++ G
Sbjct: 286 KLYGWGWNKFGQVGSGDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSF 175
            GT GQLGHGD    S+P  + + 
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQAL 368


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 3148 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3202

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 3203 VFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKK--IRDVACGSSHSAAISSQGELYTWGL 3260

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3261 GEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3317

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P     L  I ++ I      S AL+  G ++TWG+      G  
Sbjct: 3318 GKLG--RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3375

Query: 265  STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3376 GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3435

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3436 ---AL--VIGLDAVFVNRVACGSSHS 3456



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+   +  +V+ +ACG AH  A+T+      G V 
Sbjct: 4343 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA-----SGHVL 4397

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L P+ V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4398 TWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD 4457

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4458 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4514

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 4515 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 4571

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 4572 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4612



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 132/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK V   +G    +  I+ G
Sbjct: 4331 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MNVADIACG 4383

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG   +  L 
Sbjct: 4384 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTL- 4442

Query: 195  KDCLGN--QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
              C+ +   V+ +G G  G+LG  +       LP     L  + ++ +      S AL+ 
Sbjct: 4443 --CINDDDNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4498

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4499 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4558

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4559 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4613

Query: 365  YTPF 368
              P 
Sbjct: 4614 NPPL 4617



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 14/242 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +SWG G D +LG G  H    P  + L     V  + CG ++  A+T       G +++
Sbjct: 641 AYSWGNGEDHRLGHGDTHARAVPTKITLLD-RCVKAVFCGCSYSAAIT-----CSGNLYT 694

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+  +LGHG   D   P  V     H      + +G  HS  ++  G ++  GD  +
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 754

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+G+     SPV V S     V ++  G + S+ L  D    Q+Y +G        +
Sbjct: 755 GKLGNGNLNGSMSPVLVESL--PKVQRVFAGAQFSMALTTD---GQLYSWGKASCLGHQL 809

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +   +  S+P++  GL    IV ++       ALS+ G ++ WGR  N +  + CP S+
Sbjct: 810 VERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGR--NDSQQI-CPSSV 866

Query: 276 PS 277
            S
Sbjct: 867 SS 868



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 151/356 (42%), Gaps = 58/356 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLF 148
            GKV++ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G +F
Sbjct: 3147 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDGKVF 3204

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + G+G  G+LGHG+  +   P  V +  +K +  +ACG  HS  +       ++Y +G G
Sbjct: 3205 SWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQ---GELYTWGLG 3261

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG----- 260
            + G+LG   +  +    P++   L    ++ + A G R A   AL+ +G +++WG     
Sbjct: 3262 EYGRLGHGDNSTQLK--PKLVAALAGRRVIQV-ACGSRDAQTLALTEDGAVFSWGDGDFG 3318

Query: 261  ---RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               RG +  SD        S +   Q   G    L LT  GEV   G   +  L      
Sbjct: 3319 KLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3378

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P     + ++ L G +VI +A GA H   VT                         
Sbjct: 3379 HVRKP-----QPIAGLRGRRVIHVAVGALHCLAVT------------------------- 3408

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
             +   +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 3409 -DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 3458



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 146/346 (42%), Gaps = 49/346 (14%)

Query: 4   PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRL-HDELSPQLLN 62
           P +  +    S  + N K ++++    + +V + S     DG+L   R+   E  PQLL 
Sbjct: 558 PALSWSSDPSSLPLLNCKFQVQQIVCSESIVLILS----EDGKLYNWRMFKPETEPQLLE 613

Query: 63  LSSLSSVSMLA--CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF 120
             +  ++  +A  C G H +A+      I    +SWG G   +LGHG+      P  +T 
Sbjct: 614 EIAHETIVSIASHCEGRHFMAID-----INRNAYSWGNGEDHRLGHGDTHARAVPTKITL 668

Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
            D     +  +  G ++S  ++ SG L+T G GT+ +LGHG+      P  V +     +
Sbjct: 669 LD---RCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEI 725

Query: 181 HQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGV-----SKDRIRSVSLPQVTIGLH 233
             +A G    HSL L  +     VY +G    G+LG      S   +   SLP+V     
Sbjct: 726 IDVALGSGDAHSLCLTSE---GHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ---- 778

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLSFSQ---- 283
                 + A    S AL+ +G LY+WG+           S   C  S+P  +S  Q    
Sbjct: 779 -----RVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWC--SVPRLISGLQHKRI 831

Query: 284 --AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              A+G  H L L+  GEV   G +    +  P  VSS   L V +
Sbjct: 832 VDVAVGVAHCLALSSCGEVFGWGRNDSQQIC-PSSVSSEPLLRVPI 876



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 7/157 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G      +P  +   S   V  + CG    LALT       G+V++
Sbjct: 3309 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTR-----AGEVWT 3363

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+P+    G R  + H++ G  H   V+D+G ++  GD   
Sbjct: 3364 WGKGDYYRLGHGGDQHVRKPQPIAGLRGRR--VIHVAVGALHCLAVTDAGQVYAWGDNDH 3421

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            GQ G G+   +  P  V       V+++ACG  HS+ 
Sbjct: 3422 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 162/409 (39%), Gaps = 55/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            ++ WG    GQLG        +P      SL     LA G   + A+T       GK+F+
Sbjct: 4238 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4292

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
             G GS G+LG G       P  +            +++G  H   ++  G ++  G+G  
Sbjct: 4293 TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4352

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
            G+LGHG+  S+  P  V      NV  IACG  HS  +        V  +G G+ G+L  
Sbjct: 4353 GKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4409

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
            G S+D++R   L +  +G   I+I   S +  ++  ++ + ++++WG       G   + 
Sbjct: 4410 GDSEDQLRP-QLVEALLGYRAIDIACGSGDA-QTLCINDDDNVWSWGDGDYGKLGRGGSD 4467

Query: 268  DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  + S   L   +   G    + LT  G V   G      L         RP   
Sbjct: 4468 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4524

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +KV+ L G K+I IA G+ H    +                          ++  + T
Sbjct: 4525 --KKVAALQGKKIISIATGSLHCVACS--------------------------DSGEVYT 4556

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            WG  + GQLG G       P++V      Q +   ++V CGS  T A+S
Sbjct: 4557 WGDNDEGQLGDGTVTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 4601



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 92/238 (38%), Gaps = 51/238 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTW 259
            V  +G   + QLG +   +++  +  Q    L  I I G    G +S  +  + G +Y  
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVGQNGKVYAC 3152

Query: 260  GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
            G G N       T +V  P  LP    +    +    G  H L LT DG+V   G    G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R +  +P       V  L   K+  +A G+ HSA ++ +               
Sbjct: 3213 KLGHGNRTTLDKP-----RLVETLRSKKIRDVACGSSHSAAISSQGE------------- 3254

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                         + TWG GE+G+LG G+   Q+ PK+V        R   ++V CGS
Sbjct: 3255 -------------LYTWGLGEYGRLGHGDNSTQLKPKLVA---ALAGRRV-IQVACGS 3295


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 2965 KVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3019

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  I+ G +HS  +S  G L+T G 
Sbjct: 3020 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGELYTWGL 3077

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++     V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3078 GEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3134

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +      + P     L  I +V I      S AL+  G ++TWG+      G  
Sbjct: 3135 GKLG--RGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3192

Query: 265  STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3193 GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3252

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3253 ---AL--VIGLDAVFVNRVACGSSHS 3273



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+LL   +  SV+ +ACG AH  A+T+      G V 
Sbjct: 4177 EVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITA-----SGHVL 4231

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4232 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4291

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4292 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4348

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 4349 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVT 4405

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 4406 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4446



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK +   +G   ++  I+ G
Sbjct: 4165 GGKHCLALTT-----DGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNG--MSVADIACG 4217

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4277

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + ++ +      S AL+ 
Sbjct: 4278 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4332

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4333 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4392

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4393 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4447

Query: 365  YTPF 368
              P 
Sbjct: 4448 NPPL 4451



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 14/251 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +SWG G + +LG G  H    P  +  S +  V  + CG ++  A+T     + G +++
Sbjct: 662 AYSWGTGDNRRLGHGDCHSRELPTKIE-SLVRRVKSVYCGCSYSAAIT-----LRGNLYT 715

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+ G+LGHG   D   P  V     H+     + +G  H+  +++ G ++  GDG +
Sbjct: 716 WGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY 775

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+    S   P+ +       V ++  G + SL L  +    Q+Y +G        +
Sbjct: 776 GKLGNASCNSSLQPLLIECL--PRVQRVFAGSQFSLALTGE---GQLYSWGKASCLGHQL 830

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +  ++  S+P++   L    IV ++       ALS+ G ++ WGR  N      CP S+
Sbjct: 831 VERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI---CPASV 887

Query: 276 PSSLSFSQAAL 286
            S     Q  L
Sbjct: 888 CSEPLLRQPIL 898



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 173/430 (40%), Gaps = 65/430 (15%)

Query: 18   NNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGG 76
            N A   +    E+     V  WG     QLG  +      P     +S L  + +   GG
Sbjct: 2896 NTASELLAASAEQDVPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHI--AGG 2953

Query: 77   AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AG 134
            +  L + S      GKVF+ G G++G+LG G   +   P  +     H+Y +  ++  +G
Sbjct: 2954 SKSLFVVSQD----GKVFACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSG 3007

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
              H+  ++  G +F+ G+G  G+LGHG+  +   P  V +   K +  IACG  HS  + 
Sbjct: 3008 GKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAIS 3067

Query: 195  KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALS 251
                  ++Y +G G+ G+LG   +  +    P++   L    ++ + A G R A   AL+
Sbjct: 3068 SQ---GELYTWGLGEYGRLGHGDNATQLK--PKLVTALCGSRVIQV-ACGSRDAQTLALT 3121

Query: 252  AEGHLYTWG--------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
             +G +++WG        RG +  S         S +   Q   G    L LT  GEV   
Sbjct: 3122 EDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTW 3181

Query: 304  GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
            G   +  L         +P     + ++ L G +VI +A GA H   VT           
Sbjct: 3182 GKGDYYRLGHGGDQHVRKP-----QPIAGLRGRRVIHVAVGALHCLAVT----------- 3225

Query: 364  SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLE 422
                           +   +  WG  +HGQ G GNT     P  V+ L   F NR     
Sbjct: 3226 ---------------DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR----- 3265

Query: 423  VFCGSGFTYA 432
            V CGS  + A
Sbjct: 3266 VACGSSHSMA 3275



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   RI++ +  +    L  +++ G    G++S  A++ +G L+  
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG----GEQSLFAVTPDGKLFAT 4127

Query: 260  GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
            G G      V    S  +P+ L   Q           G  H L LT DGEV   G    G
Sbjct: 4128 GYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4187

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R+S  RP     + + +L+G+ V  IA G+ HSA +T   H             
Sbjct: 4188 KLGHGNRLSYDRP-----KLLEHLNGMSVADIACGSAHSAAITASGH------------- 4229

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                         ++TWG G +G+LG G++ DQ+ PK+V     ++     +++ CGSG
Sbjct: 4230 -------------VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR----AIDIACGSG 4271



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 155/387 (40%), Gaps = 68/387 (17%)

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF-VSDSGCLFTCG 151
            ++ WG    GQLG  E      P P       R       AG   S F V+  G LF  G
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQL---AGGEQSLFAVTPDGKLFATG 4128

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGK 209
             G+ G+LG G   S S P  + S  +  V ++A   G +H L L  D    +VY +G G+
Sbjct: 4129 YGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD---GEVYAWGEGE 4185

Query: 210  RGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
             G+LG    +S DR      P++   L+ + +  I+     SAA++A GH+ TWG+G   
Sbjct: 4186 DGKLGHGNRLSYDR------PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4239

Query: 263  ---FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                  + D   P+ + + L +    +    G    L +T D  V   G   +G L    
Sbjct: 4240 RLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4299

Query: 316  RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT----------GKFHWVRLFIISY 365
                  P      K+ +L G+ VI++  G++ S  +T          G FH  RL   S 
Sbjct: 4300 SDGCKLPY-----KIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH--RLGHGSV 4352

Query: 366  TPFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKV 407
                 P  +  +   + I                   TWG  + GQLG G       P++
Sbjct: 4353 DHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRL 4412

Query: 408  VNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            V      Q +   ++V CGS  T A+S
Sbjct: 4413 VA---ALQGKHI-VKVTCGSAHTLALS 4435



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 17/118 (14%)

Query: 247 SAALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLSFSQA---ALGWN--HVLVLTG 296
           SAA++  G+LYTWGRG      +  SD  C  ++  +L   Q    ALG    H L LT 
Sbjct: 704 SAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTN 763

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           +G V   G   +G L +    SS +PL +           +V ++ AG++ S  +TG+
Sbjct: 764 EGLVYAWGDGDYGKLGNASCNSSLQPLLIECLP-------RVQRVFAGSQFSLALTGE 814


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 167/386 (43%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            V +WG    GQLG G  ++  + P  + L   + V+  A G AH LA+TS      G V
Sbjct: 63  AVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTS-----AGTV 117

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            +WGR + GQLG G  ++   P  V    G   T+T ++AG+NHS  ++ +G +F  GD 
Sbjct: 118 LAWGRNAVGQLGDGTTINRSTPVDVRLPPG--TTVTAVAAGFNHSLALTSAGTVFAWGDN 175

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLG G   + S+PV VS      +  +A G  HSL L        V+ +G    GQL
Sbjct: 176 STGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTS---AGTVFAWGDNSTGQL 232

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIV-GISANGDRSAALSAEGHLYTWGRGF--------N 264
           G   D  R+     V +GL    IV  I+  G  S A+++ G+   WG  F        N
Sbjct: 233 G---DGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSN 289

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
              D +    LP   + +  A G  H L LT  G VL  G ++ G L D        P S
Sbjct: 290 INRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGS 349

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V+L       GV +  +AAG               LF ++ T                ++
Sbjct: 350 VSLPP-----GVTITAVAAG--------------DLFGLALT------------SAGTVL 378

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNL 410
            WG    GQLG G T  +  P   +L
Sbjct: 379 AWGGNIVGQLGDGTTTVRRTPVAASL 404



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 141/306 (46%), Gaps = 28/306 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG    GQLG G   +  +P  + L   ++V+ +A G  H LALTS      G VF
Sbjct: 116 TVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTS-----AGTVF 170

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S+GQLG G   +   P  V+F  G    IT ++AG  HS  ++ +G +F  GD +
Sbjct: 171 AWGDNSTGQLGDGTRTNRSTPVAVSFPSG--TVITAVAAGGMHSLALTSAGTVFAWGDNS 228

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   + S+PV V   V   V  IA G  HSL +           +G+   GQLG
Sbjct: 229 TGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTS---AGNARAWGNNFVGQLG 285

Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
               +++D    V LP  T       +  ++     S AL++ G + +WG       G  
Sbjct: 286 DGSNINRDASVHVRLPPGT------TVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDG 339

Query: 265 STSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           +  D N P S  LP  ++ +  A G    L LT  G VL  GG+  G L D        P
Sbjct: 340 TARDRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399

Query: 323 LSVALE 328
           ++ +L 
Sbjct: 400 VAASLP 405



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 132/340 (38%), Gaps = 55/340 (16%)

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
           SP++V    V +WG    GQLG G   +    P PV    G    +T  + G  HS  V+
Sbjct: 55  SPTTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTE--VTAAAGGDAHSLAVT 112

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
            +G +   G    GQLG G   + S+PV V       V  +A G  HSL L        V
Sbjct: 113 SAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTS---AGTV 169

Query: 203 YGFGSGKRGQLGVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
           + +G    GQLG      RS    VS P  T+      I  ++A G  S AL++ G ++ 
Sbjct: 170 FAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTV------ITAVAAGGMHSLALTSAGTVFA 223

Query: 259 WGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           WG       G  + ++ + P    LP     +  A G +H L +T  G     G +  G 
Sbjct: 224 WGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQ 283

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L D   ++    + V L       G  V  +A G  HS  +T                  
Sbjct: 284 LGDGSNINRDASVHVRLPP-----GTTVTAVAGGLTHSLALT------------------ 320

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                       +++WG    GQLG G   D+  P  V+L
Sbjct: 321 --------SVGTVLSWGSNNWGQLGDGTARDRNTPGSVSL 352



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
            V  V SWG+   GQLG G   D  +P  ++L    +++ +A G    LALTS      G
Sbjct: 321 SVGTVLSWGSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALTS-----AG 375

Query: 92  KVFSWGRGSSGQLGHGEMV 110
            V +WG    GQLG G   
Sbjct: 376 TVLAWGGNIVGQLGDGTTT 394


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 169/388 (43%), Gaps = 57/388 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            + +WG    GQLG G + D   P  ++L + ++V+ +A G  H LALTS      G V 
Sbjct: 55  TILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTS-----AGTVL 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGR   GQLG+G    +  P  V+   G R     ++AG +HS  ++ +G +   GD T
Sbjct: 110 AWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVA--VAAGADHSLALTSAGTILAWGDNT 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG G     S+PV VS      V  IA G  H+LVL     G  +  +G   RGQLG
Sbjct: 168 FGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTS--TGPTLLTWGKNTRGQLG 225

Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
                 +D   +V+LP        + +  ++   D S  L+++     WG       G  
Sbjct: 226 DGTTTGRDTPVAVTLPP------GVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNG 279

Query: 265 STSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           +T+D   P   +LP+    +  A G  H   LT +G     G +  G L +     S+ P
Sbjct: 280 TTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEP 339

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           ++V+L   + L  +      AG +    VT                        I    A
Sbjct: 340 VAVSLPADTRLTAI------AGRDSDHNVT------------------------ITSAGA 369

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            + WG   +G+LG G+T D+  P  V+L
Sbjct: 370 ALAWGANANGELGDGSTTDRSTPVAVSL 397



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 71/158 (44%), Gaps = 10/158 (6%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG  + GQLG G   D L P  + L + +  + +A G  H  ALTS      G  F+WG
Sbjct: 267 AWGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSE-----GAAFAWG 321

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--HSGFVSDSGCLFTCGDGTF 155
               GQLG+G   D+  P  V+     R T     AG +  H+  ++ +G     G    
Sbjct: 322 HNGRGQLGNGSTTDSSEPVAVSLPADTRLTAI---AGRDSDHNVTITSAGAALAWGANAN 378

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G+LG G     S+PV VS      V  IA G   S+ L
Sbjct: 379 GELGDGSTTDRSTPVAVSLPAGTRVAAIAAGDDQSMAL 416


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 135/254 (53%), Gaps = 23/254 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG  + GQLG G   D  +P Q+  L++ S++ ++A GG H LALTS      G+V
Sbjct: 140 RVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTS-----DGRV 194

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG+ SSGQLG+   VD+  P  V    G    +T ++AG NHS  ++  G ++  G  
Sbjct: 195 FAWGKNSSGQLGNNSTVDSSIPVQV---QGLPANVTAVAAGGNHSLALTSDGRIYAWGLN 251

Query: 154 TFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G   + S+PV V+          ++ G  HSL L++D     VY +G    GQ
Sbjct: 252 SSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQD---GTVYAWGGNSYGQ 308

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
           LG       +  +P    GL +  +  +SA G  S AL+++G++Y WG       G  +T
Sbjct: 309 LG--NGTTTASEMPVQVTGLAN--VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTT 364

Query: 267 SDVNCPQSLPSSLS 280
           S+ N P  + S LS
Sbjct: 365 SNRNTPVRVFSVLS 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 137/297 (46%), Gaps = 21/297 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG  T+GQLG G      +P       L SV+ ++ G +H LALT       G+VF+
Sbjct: 91  VWAWGDNTNGQLGDGTTTGRQTPTPAQ--GLPSVAQVSAGESHSLALTD-----DGRVFA 143

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  SSGQLG G   D+  P  V        TI  ++AG NHS  ++  G +F  G  + 
Sbjct: 144 WGLNSSGQLGDGTTADSRTPVQVQGL-ATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSS 202

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+      S PV+V      NV  +A G  HSL L  D    ++Y +G    GQLG 
Sbjct: 203 GQLGNNSTVDSSIPVQVQGL-PANVTAVAAGGNHSLALTSD---GRIYAWGLNSSGQLG- 257

Query: 216 SKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
                 + S P +  GL    + V +SA  D S AL  +G +Y WG       G  +T+ 
Sbjct: 258 -DGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTA 316

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
              P  +    + +  + G +  L LT DG V   G +  G L D    +   P+ V
Sbjct: 317 SEMPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRV 373



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 150/346 (43%), Gaps = 58/346 (16%)

Query: 70  SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
           + ++ GG+H L LTS  +V     ++WG  ++GQLG G       P P         ++ 
Sbjct: 73  AAVSAGGSHSLVLTSDQTV-----WAWGDNTNGQLGDGTTTGRQTPTPAQGLP----SVA 123

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMR 188
            +SAG +HS  ++D G +F  G  + GQLG G      +PV+V     +  +  +A G  
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGN 183

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           HSL L  D    +V+ +G    GQLG   +     S+P    GL    +  ++A G+ S 
Sbjct: 184 HSLALTSD---GRVFAWGKNSSGQLG--NNSTVDSSIPVQVQGLP-ANVTAVAAGGNHSL 237

Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGE 299
           AL+++G +Y WG       G  +TS+ + P     LP+       + G +H L L  DG 
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT 297

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   GG+ +G L +    +S  P+     +V+ L    V  ++AG   S  +T   +   
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPV-----QVTGL--ANVTAVSAGGSDSLALTSDGY--- 347

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                                  +  WG    GQLG G T ++  P
Sbjct: 348 -----------------------VYAWGLNSSGQLGDGTTSNRNTP 370



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 93/235 (39%), Gaps = 48/235 (20%)

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           ++ G  HSLVL  D     V+ +G    GQLG      R    P    GL    +  +SA
Sbjct: 75  VSAGGSHSLVLTSD---QTVWAWGDNTNGQLGDGTTTGRQTPTPAQ--GLP--SVAQVSA 127

Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLV 293
               S AL+ +G ++ WG       G  +T+D   P   Q L +  +    A G NH L 
Sbjct: 128 GESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLA 187

Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           LT DG V   G +  G L +   V S+ P+     +V  L    V  +AAG  HS  +T 
Sbjct: 188 LTSDGRVFAWGKNSSGQLGNNSTVDSSIPV-----QVQGLPA-NVTAVAAGGNHSLALT- 240

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                   ++ R I  WG    GQLG G T +   P +V
Sbjct: 241 ------------------------SDGR-IYAWGLNSSGQLGDGTTSNSSTPVLV 270


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 165/404 (40%), Gaps = 97/404 (24%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P+ L   S   +  +A   GG H LALT     I G+
Sbjct: 2705 KVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALT-----IDGR 2759

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG  +    PK V      R  I  ++ G +HS  V+ SG L+T G 
Sbjct: 2760 VFSWGEGEDGKLGHGNKISYDRPKLVESLKCKR--IRDVACGSSHSAAVTSSGELYTWGS 2817

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD      P +V +  ++ V Q+ACG R   +L L +    + VY +G G  
Sbjct: 2818 GEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTER---HWVYSWGDGDF 2874

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
            G+LG  K      SLPQ    L+  +++ +      S ALS  G ++TWG+         
Sbjct: 2875 GKLG--KGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGK--------- 2923

Query: 271  CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
                                       G+   LG      +  P+              V
Sbjct: 2924 ---------------------------GDYFRLGHGSDSHVRWPQ-------------VV 2943

Query: 331  SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
              L    VIQ++ GA H   VT +                            +  WG  +
Sbjct: 2944 EELADKNVIQVSVGALHCIAVTDRGE--------------------------VYAWGDND 2977

Query: 391  HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            HGQ G GNT     P +V   +   N      V CGS  + A S
Sbjct: 2978 HGQQGNGNTTVNRKPAIVRGLEAITN------VACGSSHSVAWS 3015



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 133/288 (46%), Gaps = 34/288 (11%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISA 133
            GG H LALTS      G VFSWG G  G+LGHG       PK + +  D H   +  ++ 
Sbjct: 3714 GGKHCLALTS-----SGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKH---VVSVAC 3765

Query: 134  GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSL 191
            G  HS  ++ SG L+T G G +G+LGHGD      P KV      NV  +ACG     +L
Sbjct: 3766 GGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTL 3825

Query: 192  VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
             + +D L   V+ +G G  G+LG  +        PQ    L +  ++ +      S AL+
Sbjct: 3826 CVSRDGL---VWSWGDGDYGKLG--RGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALT 3880

Query: 252  AEGHLY--------TWGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEV 300
            A G +Y          G G  S   V  PQ++  +L      Q A+G  H +  T  GEV
Sbjct: 3881 AAGVVYTWGKGDYHRLGHG--SEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEV 3938

Query: 301  LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
               G +  G L D    +  RP     + V++L G K+ ++A G+ H+
Sbjct: 3939 FTWGDNDEGQLGDGSTNAIQRP-----KLVASLKGKKMNRVACGSAHT 3981



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 13/227 (5%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G DG+LG G       P+L+       V  +ACGGAH   +T+      G++++
Sbjct: 3727 VFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITA-----SGELYT 3781

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G  G+LGHG+  D L PK V    GH        +G   +  VS  G +++ GDG +
Sbjct: 3782 WGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDY 3841

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            G+LG G       P K+ S  N  V ++ CG + S+ L        VY +G G   +LG 
Sbjct: 3842 GKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTA---AGVVYTWGKGDYHRLGH 3898

Query: 216  -SKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
             S+D +R    PQ   G L    ++ ++       A +  G ++TWG
Sbjct: 3899 GSEDHVRR---PQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWG 3942



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 172/408 (42%), Gaps = 58/408 (14%)

Query: 39   WGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
            WG    GQLG        +  + + L++L  V ++  G   + ALTS      GKV++ G
Sbjct: 3624 WGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVG-GEQTLFALTS-----DGKVYATG 3677

Query: 98   RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             G+ G+LG G       P  +        T   +++G  H   ++ SG +F+ G+G  G+
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737

Query: 158  LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GV 215
            LGHG       P  + S  +K+V  +ACG  HS  +       ++Y +G G+ G+L  G 
Sbjct: 3738 LGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITA---SGELYTWGKGRYGRLGHGD 3794

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
            S+D+++   + +  +  H++  V   +   ++  +S +G +++WG       G   +   
Sbjct: 3795 SEDQLKPKKVEE--LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGC 3852

Query: 270  NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              PQ + S  +    +   G    + LT  G V   G   +  L         RP +V  
Sbjct: 3853 KFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQ- 3911

Query: 328  EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                 L G +VIQ+A G+ H    T                          ++  + TWG
Sbjct: 3912 ---GALQGKRVIQVAVGSLHCVACT--------------------------DSGEVFTWG 3942

Query: 388  WGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 434
              + GQLG G+T     PK+V +L  +  NR     V CGS  T + S
Sbjct: 3943 DNDEGQLGDGSTNAIQRPKLVASLKGKKMNR-----VACGSAHTVSWS 3985



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)

Query: 21   KPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQLLNLS 64
            +PK+ E   ++ VV V                ++WG G  G+LG G   D+L P+ +   
Sbjct: 3748 RPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEEL 3807

Query: 65   SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
            +  +V  +ACG      L        G V+SWG G  G+LG G      +P+ +      
Sbjct: 3808 AGHNVLDVACGSGDAQTLCVSRD---GLVWSWGDGDYGKLGRGGSDGCKFPQKIDSL--Q 3862

Query: 125  RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQI 183
               +  +  G   S  ++ +G ++T G G + +LGHG       P  V  +   K V Q+
Sbjct: 3863 NAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQV 3922

Query: 184  ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            A G  H +         +V+ +G    GQLG
Sbjct: 3923 AVGSLHCVACTD---SGEVFTWGDNDEGQLG 3950



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 51/246 (20%)

Query: 194  LKDCLGNQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALS 251
            +++ +  +V+ +G   + QLG +   +I+     +V   L  + I G    G +S   +S
Sbjct: 2646 MRENIECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMNIAG----GSKSLFIVS 2701

Query: 252  AEGHLYTWGRGFNS------TSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVL 301
             +G ++  G G N       + +V  P+ L    P  +       G  H L LT DG V 
Sbjct: 2702 HDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVF 2761

Query: 302  MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
              G    G L    ++S  RP     + V +L   ++  +A G+ HSA VT         
Sbjct: 2762 SWGEGEDGKLGHGNKISYDRP-----KLVESLKCKRIRDVACGSSHSAAVTS-------- 2808

Query: 362  IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                              +  + TWG GE+G+LG G+   Q+ PK V       + +  +
Sbjct: 2809 ------------------SGELYTWGSGEYGRLGHGDNVPQLKPKQVRA----LSHERVV 2846

Query: 422  EVFCGS 427
            +V CGS
Sbjct: 2847 QVACGS 2852



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            KVW+WG G   +LG G       PQ++   +  +V  ++ G  H +A+T       G+V+
Sbjct: 2917 KVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTD-----RGEVY 2971

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            +WG    GQ G+G       P  V   +     IT+++ G +HS   S +G
Sbjct: 2972 AWGDNDHGQQGNGNTTVNRKPAIVRGLEA----ITNVACGSSHSVAWSSTG 3018


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 151/327 (46%), Gaps = 28/327 (8%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + V+ WG    G+LG G + DE  L P+ ++    SSV   ACG +H L LT       G
Sbjct: 1   MAVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTK-----DG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTC 150
           K+FS G    GQLGH    D L  K   F      Y +TH+S G  HS  +++ G +F+ 
Sbjct: 56  KLFSCGNNDHGQLGHD--TDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW 113

Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           G  + GQLGH  D +++++P  + +   K V QIA G  HSL L       +++ +G+  
Sbjct: 114 GSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTN---SGELFSWGANG 170

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG+     + V+ P +   L  I I  I+  G+ S A+S  G ++ WG+      G 
Sbjct: 171 YGQLGLGTTGEKVVT-PTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N       PQ L +  +L     + G +    LT +G V   G    G L      +   
Sbjct: 230 NDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL 289

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
           P       V  L G K+ QIA G  H+
Sbjct: 290 P-----RMVFELMGSKITQIACGRRHT 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 8/161 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWGA   GQLG G   +++ +P L+   +   ++ +ACGG H  A++       G +
Sbjct: 162 ELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSK-----SGAI 216

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  ++V   +P+ +         + +IS G + S F++  G +FTCG G
Sbjct: 217 FGWGKNTFGQLGLNDLVSRCFPQQLKTL--RNLGVRYISCGDDFSAFLTQEGGVFTCGAG 274

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           TFGQLGHG   +   P  V   +   + QIACG RH+L  +
Sbjct: 275 TFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFV 315


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 160/333 (48%), Gaps = 32/333 (9%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +SWG  ++G+LG G   +   P+L++  + +++ ++ACG  H  A+T     + G +++W
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT-----LSGDLYTW 384

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G+G  G LGHG  V    PK V F  +G    ++ I+ G  H+  V+ +G LFT GDGTF
Sbjct: 385 GKGDFGVLGHGNEVSHWVPKRVNFLLEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 442

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
           G LGHGD +S   P +V S       + ACG+ H+  +++  +G+         +++ +G
Sbjct: 443 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
            G +G+LG      + V  P     L +     ++     + AL+  GH+YT     +G+
Sbjct: 503 DGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560

Query: 262 GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             NS +D   P  +   L  S   + A G  HV VLT   EV   G   +G L   +   
Sbjct: 561 LGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 620

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              P       V +L   +V  IA G   +A V
Sbjct: 621 RNSPT-----LVESLKDKQVKSIACGTNFTAAV 648



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 178/406 (43%), Gaps = 72/406 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G+ FSWG  S G+LGHG  VD+ 
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHG--VDSN 347

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
             +P      +   I  ++ G  HS  V+ SG L+T G G FG LGHG+  SH  P +V 
Sbjct: 348 IQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV- 406

Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           +F+ + +H   IACG  H+ V+       Q++ FG G  G LG      +SV +P+    
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLGHGDK--KSVFIPREVDS 461

Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST--SDVNCPQSLPS 277
           L  +  V  +     +AA+             + G L+TWG G           P+ +P+
Sbjct: 462 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPT 521

Query: 278 SLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            ++      F Q A G +  + LT  G V  +G   +G L +      T P  V      
Sbjct: 522 CVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT-PNRVE----G 576

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L    V +IA GA H AV+T +                            + TWG G +
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTE--------------------------VYTWGKGSN 610

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           G+LG G+  D+  P +V        +D Q++ + CG+ FT A+  H
Sbjct: 611 GRLGHGDVDDRNSPTLVE-----SLKDKQVKSIACGTNFTAAVCIH 651



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G    +L P  +      +   +ACG +  +ALT+      G V+
Sbjct: 497 KLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 551

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+    D   P  V   +G  H+  +  I+ G  H   ++    ++T G 
Sbjct: 552 TMGSPVYGQLGNSH-ADGKTPNRV---EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 607

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           G+ G+LGHGD    +SP  V S  +K V  IACG
Sbjct: 608 GSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 100/413 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++ +V ++ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTT-----AGELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LG+G  V    PK ++   +GH+  + ++S G  H+  V+  G LFT G
Sbjct: 152 TWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQ--VAYVSCGTWHTALVTSRGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHG+  S S P +V S        +ACG+ H+  +++  +          +++
Sbjct: 210 DGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLF 269

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G + +LG                            +GD+   L             
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPRLKP----------- 290

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                  C  SL     F + A G +  + LT  G++L +G + +G L +P R     P 
Sbjct: 291 ------TCVASL-IDYDFCRIACGHSLTVGLTTSGQILSMGNTVYGQLGNP-RSDGKLPC 342

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                 V ++ G  V+Q+A G+ H AV+T K                            +
Sbjct: 343 -----LVEDIMGEHVVQVACGSYHVAVLTNKSE--------------------------V 371

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+   K+  L +  ++R  +  + CGS FT AI +H
Sbjct: 372 FTWGKGANGRLGHGDIEDR---KIPTLVEALRDRGVR-HIACGSNFTSAICQH 420


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 160/333 (48%), Gaps = 32/333 (9%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +SWG  ++G+LG G   +   P+L++  + +++ ++ACG  H  A+T     + G +++W
Sbjct: 317 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT-----LSGDLYTW 371

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G+G  G LGHG  V    PK V F  +G    ++ I+ G  H+  V+ +G LFT GDGTF
Sbjct: 372 GKGDFGVLGHGNEVSHWVPKRVNFLLEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 429

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
           G LGHGD +S   P +V S       + ACG+ H+  +++  +G+         +++ +G
Sbjct: 430 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 489

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
            G +G+LG      + V  P     L +     ++     + AL+  GH+YT     +G+
Sbjct: 490 DGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 547

Query: 262 GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             NS +D   P  +   L  S   + A G  HV VLT   EV   G   +G L   +   
Sbjct: 548 LGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 607

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              P       V +L   +V  IA G   +A V
Sbjct: 608 RNSPT-----LVESLKDKQVKSIACGTNFTAAV 635



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 178/406 (43%), Gaps = 72/406 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G+ FSWG  S G+LGHG  VD+ 
Sbjct: 282 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHG--VDSN 334

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
             +P      +   I  ++ G  HS  V+ SG L+T G G FG LGHG+  SH  P +V 
Sbjct: 335 IQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV- 393

Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           +F+ + +H   IACG  H+ V+       Q++ FG G  G LG      +SV +P+    
Sbjct: 394 NFLLEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLGHGDK--KSVFIPREVDS 448

Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST--SDVNCPQSLPS 277
           L  +  V  +     +AA+             + G L+TWG G           P+ +P+
Sbjct: 449 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPT 508

Query: 278 SLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            ++      F Q A G +  + LT  G V  +G   +G L +      T P  V      
Sbjct: 509 CVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT-PNRVE----G 563

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L    V +IA GA H AV+T +                            + TWG G +
Sbjct: 564 KLHKSFVEEIACGAYHVAVLTSRTE--------------------------VYTWGKGSN 597

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           G+LG G+  D+  P +V        +D Q++ + CG+ FT A+  H
Sbjct: 598 GRLGHGDVDDRNSPTLVE-----SLKDKQVKSIACGTNFTAAVCIH 638



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G    +L P  +      +   +ACG +  +ALT+      G V+
Sbjct: 484 KLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 538

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+    D   P  V   +G  H+  +  I+ G  H   ++    ++T G 
Sbjct: 539 TMGSPVYGQLGNSH-ADGKTPNRV---EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 594

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           G+ G+LGHGD    +SP  V S  +K V  IACG
Sbjct: 595 GSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 628


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 160/333 (48%), Gaps = 32/333 (9%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +SWG  ++G+LG G   +   P+L++  + +++ ++ACG  H  A+T     + G +++W
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT-----LSGDLYTW 384

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G+G  G LGHG  V    PK V F  +G    ++ I+ G  H+  V+ +G LFT GDGTF
Sbjct: 385 GKGDFGVLGHGNEVSHWVPKRVNFLLEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 442

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
           G LGHGD +S   P +V S       + ACG+ H+  +++  +G+         +++ +G
Sbjct: 443 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
            G +G+LG      + V  P     L +     ++     + AL+  GH+YT     +G+
Sbjct: 503 DGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560

Query: 262 GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             NS +D   P  +   L  S   + A G  HV VLT   EV   G   +G L   +   
Sbjct: 561 LGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 620

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              P       V +L   +V  IA G   +A V
Sbjct: 621 RNSPTL-----VESLKDKQVKSIACGTNFTAAV 648



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 178/413 (43%), Gaps = 86/413 (20%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G+ FSWG  S G+LGHG  VD+ 
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHG--VDSN 347

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
             +P      +   I  ++ G  HS  V+ SG L+T G G FG LGHG+  SH  P +V 
Sbjct: 348 IQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV- 406

Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           +F+ + +H   IACG  H+ V+       Q++ FG G  G LG      +SV +P+    
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLGHGDK--KSVFIPREVDS 461

Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST--SDVNCPQSLPS 277
           L  +  V  +     +AA+             + G L+TWG G           P+ +P+
Sbjct: 462 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPT 521

Query: 278 SLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD-------PERVSSTRPLS 324
            ++      F Q A G +  + LT  G V  +G   +G L +       P RV       
Sbjct: 522 CVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVE------ 575

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
                   L    V +IA GA H AV+T +                            + 
Sbjct: 576 ------GKLHKSFVEEIACGAYHVAVLTSRTE--------------------------VY 603

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V        +D Q++ + CG+ FT A+  H
Sbjct: 604 TWGKGSNGRLGHGDVDDRNSPTLVE-----SLKDKQVKSIACGTNFTAAVCIH 651



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G    +L P  +      +   +ACG +  +ALT+      G V+
Sbjct: 497 KLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 551

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+    D   P  V   +G  H+  +  I+ G  H   ++    ++T G 
Sbjct: 552 TMGSPVYGQLGNSH-ADGKLPNRV---EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 607

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           G+ G+LGHGD    +SP  V S  +K V  IACG
Sbjct: 608 GSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 152/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 3098 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3152

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  I+ G +HS  +S  G L+T G 
Sbjct: 3153 VFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGELYTWGL 3210

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3211 GEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3267

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +      + P     L  I ++ I      S AL+  G ++TWG+      G  
Sbjct: 3268 GKLG--RGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3325

Query: 265  STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3326 GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3385

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3386 ---AL--VIGLDAVFVNRVACGSSHS 3406



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+LL   +  SV+ +ACG AH  A+T+      G V 
Sbjct: 4306 EVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITA-----SGHVL 4360

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4361 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4420

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4421 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4477

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 4478 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVT 4534

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 4535 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4575



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK +   +G   ++  I+ G
Sbjct: 4294 GGKHCLALTT-----DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNG--MSVADIACG 4346

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4406

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + ++ +      S AL+ 
Sbjct: 4407 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4461

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4462 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4521

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4522 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4576

Query: 365  YTPF 368
              P 
Sbjct: 4577 NPPL 4580



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 14/248 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +SWG G   +LG G  H    P  +  S +  V  + CG ++  A+T     + G +++
Sbjct: 638 AYSWGVGDSRRLGHGDCHARELPTKIE-SLVRRVQSVYCGCSYSAAIT-----LRGNLYT 691

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+ G+LGHG   D   P  V     H+     + +G  H+  ++  G ++  GDG +
Sbjct: 692 WGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY 751

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+G   S   P+ +       V ++  G + SL L   C G Q+Y +G        +
Sbjct: 752 GKLGNGSCNSSLQPLLIECL--PRVQRVFAGSQFSLAL--TCEG-QLYSWGKASCLGHQL 806

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +  ++  S+P++   L    IV ++       ALS+ G ++ WGR  N      CP S+
Sbjct: 807 VERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI---CPASV 863

Query: 276 PSSLSFSQ 283
            S     Q
Sbjct: 864 CSEPLLRQ 871



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 172/419 (41%), Gaps = 65/419 (15%)

Query: 29   EEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSS 87
            E++    V  WG     QLG  +      P     +S L  + +   GG+  L + S   
Sbjct: 3040 EQELPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHI--AGGSKSLFVVSQD- 3096

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSG 145
               GKV++ G G++G+LG G  V    P P      H+Y +  ++  +G  H+  ++  G
Sbjct: 3097 ---GKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDG 3151

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
             +F+ G+G  G+LGHG+  +   P  V +   K +  IACG  HS  +       ++Y +
Sbjct: 3152 KVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQ---GELYTW 3208

Query: 206  GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG-- 260
            G G+ G+LG   +  +    P++   LH   ++ + A G R A   AL+ +G +++WG  
Sbjct: 3209 GLGEYGRLGHGDNATQLK--PKLVTALHGRRVIQV-ACGSRDAQTLALTEDGAVFSWGDG 3265

Query: 261  ------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                  RG +  S         S +   Q   G    L LT  GEV   G   +  L   
Sbjct: 3266 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3325

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                  +P     + ++ L G +VI +A GA H   VT                      
Sbjct: 3326 GDQHVRKP-----QPIAGLRGRRVIHVAVGALHCLAVT---------------------- 3358

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 3359 ----DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSMA 3408



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   RI++ +  +    L  I++ G    G++S  A++ +G L+  
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAG----GEQSLFAVTPDGKLFAT 4256

Query: 260  GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
            G G      V    S  +P+ L   Q           G  H L LT DGEV   G    G
Sbjct: 4257 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4316

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R+S  RP     + + +L+G+ V  IA G+ HSA +T   H             
Sbjct: 4317 KLGHGNRMSYDRP-----KLLEHLNGMSVADIACGSAHSAAITASGH------------- 4358

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                         ++TWG G +G+LG G++ DQ+ PK+V     ++     +++ CGSG
Sbjct: 4359 -------------VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYR----AIDIACGSG 4400



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 154/386 (39%), Gaps = 66/386 (17%)

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            ++ WG    GQLG  E      P P       R     ++ G      V+  G LF  G 
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPI--QLAGGEQSLFAVTPDGKLFATGY 4258

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+ G+LG G   S + P  + S  +  V ++A   G +H L L  D    +VY +G G+ 
Sbjct: 4259 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD---GEVYAWGEGED 4315

Query: 211  GQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
            G+LG    +S DR      P++   L+ + +  I+     SAA++A GH+ TWG+G    
Sbjct: 4316 GKLGHGNRMSYDR------PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369

Query: 263  --FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
                 + D   P+ + + L +    +    G    L +T D  V   G   +G L     
Sbjct: 4370 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4429

Query: 317  VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT----------GKFHWVRLFIISYT 366
                 P      K+ +L G+ VI++  G++ S  +T          G FH  RL   S  
Sbjct: 4430 DGCKLPY-----KIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH--RLGHGSVD 4482

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG G       P++V
Sbjct: 4483 HVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4542

Query: 409  NLGDEFQNRDTQLEVFCGSGFTYAIS 434
                  Q +   ++V CGS  T A+S
Sbjct: 4543 A---ALQGKHI-VKVTCGSAHTLALS 4564


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 166/386 (43%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+ + GQLG G + DE  L+P  +  +  ++V  +ACG  H L LT+      GK
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G     QLGH    D    +P+   +   Y I  I  G  HS  +SD G + + GD
Sbjct: 61  VYACGSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH  D      P  V   V K V QIACG  HSL  L  C   ++Y +GS   G
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173

Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLGV S + +   + P     L  I +  I+  G+ S  +S  G ++ WGR      G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             ++ + P  L +  +L     A G    + LT +G V   G   +G L      +   P
Sbjct: 234 DETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  V  L G  + Q+A G  H+                         + ++     
Sbjct: 294 -----RMVMELMGSTITQVACGNRHT-------------------------LALVPSRGR 323

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  +G G  GQLG  +T   + P+VV
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG    +D       L L++L  + +  +ACGG H   ++       G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            VF WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VY FG G  G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 144/330 (43%), Gaps = 48/330 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          +  ++ G  H+ F++ +G ++ 
Sbjct: 4   GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG   + QLGH        P+ +    +  + QI CG RHSL L       QV  +G   
Sbjct: 64  CGSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSD---WGQVLSWGDND 118

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG + D+   V LP+V   L    +V I+   + S AL++ G LY+WG       G 
Sbjct: 119 CGQLGHATDK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           NS +D+   N P  L + L    AA+  G NH  +++  G V   G ++ G L   +  +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            + P      ++  L  + V  +A G E S  +T +                        
Sbjct: 238 RSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNE------------------------ 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
               + T G G +GQLG G + +++ P++V
Sbjct: 269 --GGVFTCGAGAYGQLGHGFSSNEMLPRMV 296


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 169/386 (43%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+ + GQLG G + DE  L+P+ +  +  ++V  ++CG  H L LT+      GK
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTA-----TGK 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G     QLGH    D    +P    +   Y I  IS G  HS  +SD G + + GD
Sbjct: 61  VYACGSNDYSQLGH----DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH   +     P  V   V+K V QIACG  HSL  L  C   ++Y +GS   G
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173

Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLGV S + +   + P     L  I +  I+  G+ S  +S  G ++ WGR      G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             ++   P  L +  +L    AA G    + LT +G V   G   +G L      +   P
Sbjct: 234 DETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  V  L G  + Q+A G  H+              +++ P               
Sbjct: 294 -----RMVMELMGSTITQVACGNRHT--------------LAFVP-----------SRGK 323

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  +G G  GQLG  +T   + P+VV
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 18/202 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG    +D       L L++L  + +  +ACGG H   ++       G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFT 149
            VF WGR + GQLG  +  +  YP  +      G R+     + G   S F+++ G +FT
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFA----ACGDEFSVFLTNEGGVFT 273

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG G +GQLGHG   +   P  V   +   + Q+ACG RH+L  +      +VY FG G 
Sbjct: 274 CGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPS--RGKVYAFGLGS 331

Query: 210 RGQLGVSKDRIRSVSLPQVTIG 231
            GQLG      +S+ LPQV IG
Sbjct: 332 SGQLGTRS--TKSLMLPQVVIG 351



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 142/330 (43%), Gaps = 48/330 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          +  +S G  H+ F++ +G ++ 
Sbjct: 4   GKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYA 63

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG   + QLGH        P  +    +  + QI+CG RHSL L       QV  +G   
Sbjct: 64  CGSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSD---WGQVLSWGDND 118

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG + ++   V LP+V   L    +V I+   + S AL++ G LY+WG       G 
Sbjct: 119 CGQLGHATEK-EIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           NS +D+   N P  L + L    AA+  G NH  +++  G V   G ++ G L   +  +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P      ++  L  + V   A G E S  +T +                        
Sbjct: 238 RAYP-----TQLKTLRTLGVRFAACGDEFSVFLTNE------------------------ 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
               + T G G +GQLG G + +++ P++V
Sbjct: 269 --GGVFTCGAGAYGQLGHGFSSNEMLPRMV 296


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 166/386 (43%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+ + GQLG G + DE  L+P  +  +  ++V  +ACG  H L LT+      GK
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G     QLGH    D    +P+   +   Y I  I  G  HS  +SD G + + GD
Sbjct: 61  VYACGSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH  D      P  V   V K V QIACG  HSL  L  C   ++Y +GS   G
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173

Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLGV S + +   + P     L  I +  I+  G+ S  +S  G ++ WGR      G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             ++ + P  L +  +L     A G    + LT +G V   G   +G L      +   P
Sbjct: 234 DETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  V  L G  + Q+A G  H+                         + ++     
Sbjct: 294 -----RMVMELMGSTITQVACGNRHT-------------------------LALVPSRGR 323

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  +G G  GQLG  +T   + P+VV
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG    +D       L L++L  + +  +ACGG H   ++       G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            VF WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VY FG G  G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 144/330 (43%), Gaps = 48/330 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          +  ++ G  H+ F++ +G ++ 
Sbjct: 4   GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG   + QLGH        P+ +    +  + QI CG RHSL L       QV  +G   
Sbjct: 64  CGSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSD---WGQVLSWGDND 118

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG + D+   V LP+V   L    +V I+   + S AL++ G LY+WG       G 
Sbjct: 119 CGQLGHATDK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           NS +D+   N P  L + L    AA+  G NH  +++  G V   G ++ G L   +  +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            + P      ++  L  + V  +A G E S  +T +                        
Sbjct: 238 RSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNE------------------------ 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
               + T G G +GQLG G + +++ P++V
Sbjct: 269 --GGVFTCGAGAYGQLGHGFSSNEMLPRMV 296


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 167/386 (43%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+ + GQLG G + DE  L+P+ +  +  ++V  +ACG  H L LT+      GK
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G     QLGH    D    +P    +   Y I  IS G  HS  +SD G + + GD
Sbjct: 61  VYACGSNDYSQLGH----DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH   +     P  V   V+K V QIACG  HSL  L  C   ++Y +GS   G
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173

Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLGV S + +   + P     L  I +  I+  G+ S  +S  G ++ WGR      G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             ++   P  L +  +L     A G    + LT +G V   G   +G L      +   P
Sbjct: 234 DETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  V  L G  + Q+A G  H+                         + ++     
Sbjct: 294 -----RMVMELMGSTITQVACGNRHT-------------------------LALVPSRGK 323

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  +G G  GQLG  +T   + P+VV
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG    +D       L L++L  + +  +ACGG H   ++       G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            VF WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VY FG G  G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGKVYAFGLGSSG 333

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 143/330 (43%), Gaps = 48/330 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          +  ++ G  H+ F++ +G ++ 
Sbjct: 4   GKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG   + QLGH        P  +    +  + QI+CG RHSL L       QV  +G   
Sbjct: 64  CGSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSD---WGQVLSWGDND 118

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG + ++   V LP+V   L    +V I+   + S AL++ G LY+WG       G 
Sbjct: 119 CGQLGHATEK-EIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           NS +D+   N P  L + L    AA+  G NH  +++  G V   G ++ G L   +  +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P      ++  L  + V  +A G E S  +T +                        
Sbjct: 238 RAYP-----TQLKTLRTLGVRFVACGDEFSVFLTNE------------------------ 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
               + T G G +GQLG G + +++ P++V
Sbjct: 269 --GGVFTCGAGAYGQLGHGFSSNEMLPRMV 296


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  125 bits (313), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 17/236 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG G+ G LG GR+ D  +P  +++S L   + +A G  H LAL         +V+ 
Sbjct: 320 VFIWGMGSQGCLGNGRVDDLETPTQIDISGLF-FNEIAAGAYHSLALAK-----NNQVYG 373

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G   + L PK +TFFD  +    ++  G  HS  ++ +  L+T G+G +
Sbjct: 374 WGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDY 433

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKRGQL 213
            +LGHG       P K+    +  V  +A G  HSL     C+ N+  VY +GS K   L
Sbjct: 434 YRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSL-----CITNEGFVYAWGSSKDSVL 488

Query: 214 GVSKDRIRSVSLPQ----VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
           G+   + +  +LPQ    ++    D     ++A    S +LS  GHLY WG   NS
Sbjct: 489 GMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNS 544



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 86/395 (21%), Positives = 152/395 (38%), Gaps = 51/395 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV--SMLACGGAHVLALTSPSSVIGGK 92
           +V+ WG    GQLG G   ++L P+ L       +    L CG  H   +T+       +
Sbjct: 370 QVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITT-----NKE 424

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +++WG G   +LGHG ++D + PK +         +  ++ G  HS  +++ G ++  G 
Sbjct: 425 LYTWGNGDYYRLGHGMLLDEMEPKKIEIL--QDVYVLDVALGTIHSLCITNEGFVYAWGS 482

Query: 153 GTFGQLGH--GDYRSHSSPVKV----SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
                LG     Y+  + P +V     SF + + +Q+A G  HSL L ++     +Y +G
Sbjct: 483 SKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSEN---GHLYVWG 539

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----GDRSAALSAEGHLYTWGR 261
           S K   LGV         +PQ      D+E   I              +  +  L T+ +
Sbjct: 540 SNKNSLLGVRLQGQEHTCVPQKVEQSEDLEKSCIEKALFFNLKKEEQQMMKDEKLVTFEQ 599

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-SDPER---- 316
                + +           +  A LG  +   +   G +   G +  GML  +P +    
Sbjct: 600 TTLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQKF 659

Query: 317 ---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
              +    P  +  E+  +   ++++                 + R  II Y        
Sbjct: 660 KQFIPQKDPPDILFEQ--SFTPIEIV-----------------YFRNTIIRYISCQYNHC 700

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           I V A+  A   WG  ++ QLGLG   D +   ++
Sbjct: 701 IAVTAKGNA-YCWGSNQYNQLGLGFQSDHVFTPIL 734



 Score = 48.5 bits (114), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 90/231 (38%), Gaps = 53/231 (22%)

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------TSDV 269
           + D I+ ++L Q        E V I      + AL+ EG ++ WG G           D+
Sbjct: 288 NSDFIQPIALKQ--------EFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDL 339

Query: 270 NCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
             P  +  S L F++ A G  H L L  + +V   G ++ G L    + +   P     +
Sbjct: 340 ETPTQIDISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLP-----K 394

Query: 329 KVSNLDGVKVI--QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
           +++  D  K+    +  G +HSA +T                           N+ + TW
Sbjct: 395 QLTFFDRKKIQCQYLYCGDQHSACIT--------------------------TNKELYTW 428

Query: 387 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL---EVFC--GSGFTYA 432
           G G++ +LG G   D++ PK + +  +    D  L      C    GF YA
Sbjct: 429 GNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYA 479



 Score = 45.8 bits (107), Expect = 0.043,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 89/233 (38%), Gaps = 40/233 (17%)

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR--SAALSAEGHLYTWGRG 262
           +G+   G+LG  K +  + S  Q     ++   +  ++   +  S     +   Y   + 
Sbjct: 225 WGNPANGRLGAPKSKFPNESDKQTIFNNNNPSQMDFTSRQMQQPSRTQQVQNSQYNLNQA 284

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             + SD   P +L     F +   G +H + LT +G V + G    G L +        P
Sbjct: 285 EPNNSDFIQPIALKQE--FVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETP 342

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             +      ++ G+   +IAAGA HS                            +A+N  
Sbjct: 343 TQI------DISGLFFNEIAAGAYHSLA--------------------------LAKNNQ 370

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 434
           +  WG    GQLG+GN  +Q+ PK +     F  +  Q + ++CG   +  I+
Sbjct: 371 VYGWGVNNRGQLGIGNKENQLLPKQLTF---FDRKKIQCQYLYCGDQHSACIT 420



 Score = 41.2 bits (95), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 16/155 (10%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRY 126
           +  ++C   H +A+T+      G  + WG     QLG G   D ++  P+   +G   + 
Sbjct: 690 IRYISCQYNHCIAVTAK-----GNAYCWGSNQYNQLGLGFQSDHVF-TPI-LLEGAIEQK 742

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIA 184
            I     G   S  ++D G +++ G   FG LGH   ++     P  ++     ++  +A
Sbjct: 743 VIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDI--PSMINLA 800

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
           C  +    + +     Q++ +G+ + GQLG+S  R
Sbjct: 801 CSNQTMFAIDQK---QQLWAWGNNQFGQLGISLQR 832


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 184/413 (44%), Gaps = 101/413 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   +   P+L+   S+ +V ++ACG  H  A+T+      G ++
Sbjct: 98  EVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTAT-----GDLY 152

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK V+   DG    ++ +S G  H+  ++ SG L+T G
Sbjct: 153 TWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDG--LPVSTVSCGTWHTALITSSGQLYTFG 210

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYGF 205
           DGTFG LGHG+  S S P +V S        ++CG+ H+  +++  +        +++ +
Sbjct: 211 DGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTW 270

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
           G G + +LG                            +GDRS+ L               
Sbjct: 271 GDGDKYRLG----------------------------HGDRSSKLK-------------- 288

Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                 P  +PS    +F +AA G    + LT  G +  +G S +G L +P   +  R  
Sbjct: 289 ------PTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPN--NDGRYP 340

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  E+   L G  V+++A G+ H AV+T                              +
Sbjct: 341 RLVEEQ---LGGGGVVEVACGSYHVAVLTNAGE--------------------------V 371

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+   KV  L +  ++R  +  V CGS FT AI +H
Sbjct: 372 YTWGKGANGRLGHGDIADR---KVPTLVEALRDRSVK-RVACGSSFTAAICQH 420



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 124/342 (36%), Gaps = 108/342 (31%)

Query: 91  GKVFSWG--------RGSSGQLGH--GEMVDALYPKPV---TFFDGHRYTITHISAGWNH 137
           G ++ WG        R  S +  +  G   D L PKP+      D     +++++ G  H
Sbjct: 35  GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLD-----VSYVACGVKH 89

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           +  V+    +FT G+   G+LGHG   +   P  V S    NV  IACG  H+       
Sbjct: 90  AALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHT------- 142

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
                                                     ++A GD          LY
Sbjct: 143 ----------------------------------------CAVTATGD----------LY 152

Query: 258 TWGRGFNSTSDV----NCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGS 306
           TWG G ++   +    N    +P  +S        S  + G  H  ++T  G++   G  
Sbjct: 153 TWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDG 212

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             G+L    R S + P     ++V +L G++ I ++ G  H+A V          IIS +
Sbjct: 213 TFGVLGHGNRASCSYP-----KEVESLKGLRTISVSCGVWHTAAVVE-------VIISQS 260

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                      A +  + TWG G+  +LG G+   ++ P  +
Sbjct: 261 N----------ASSGKLFTWGDGDKYRLGHGDRSSKLKPTCI 292


>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
 gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
          Length = 364

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 183/416 (43%), Gaps = 74/416 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVS----MLACGGAHVLALTSPSSVIG 90
           ++SWGA + GQLG G   DE +SP+ +NL     V+     +A G  H L L        
Sbjct: 3   LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDK-----N 57

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V+  G  S GQLG  +  D L    +    G R  I  IS GW+ S  VS+ G  F  
Sbjct: 58  GFVYCCGWNSKGQLGTSD--DTLKITQIEILKGFR--IVQISCGWDFSAAVSECGKQFVW 113

Query: 151 GDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           G+ ++ QLG     + +   S ++VS  +     Q++CG+RHS +L KD     +   G+
Sbjct: 114 GNNSYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKD---GGLLVAGT 170

Query: 208 GKRGQLGVSK--DRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGR--- 261
           G +GQLG+    D    +S+ +V     D+E IV I++    +  L  +G +Y+WG    
Sbjct: 171 GSKGQLGLGDNFDDNNYLSISKVP----DLEDIVSIASGQHHTVVLKEDGTVYSWGENKY 226

Query: 262 ---GFN-STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
              G + + S+   P  +    +      GW H   L+  GEV   G + +G L      
Sbjct: 227 GQLGIDPNISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG----- 281

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
            + R ++   EK+  L    V Q++ G+EH+  VT                         
Sbjct: 282 -AQREVTYKPEKIPGLK--DVTQLSVGSEHNLAVT------------------------- 313

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            ++  +  WGW EHG  G G+  D   P  +     F NR  +    C +G ++A+
Sbjct: 314 -KDGKLFVWGWNEHGSCGTGDKTDVCKPTQI-----FANRKVKAAFAC-TGSSFAV 362



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + GQLG  R   E++ +   +  L  V+ L+ G  H LA+T       GK+F
Sbjct: 268 EVFTWGRNSYGQLGAQR---EVTYKPEKIPGLKDVTQLSVGSEHNLAVTKD-----GKLF 319

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV 118
            WG    G  G G+  D   P  +
Sbjct: 320 VWGWNEHGSCGTGDKTDVCKPTQI 343


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 150/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G GT+G+LG G  H+   P  L +     V  +A   GG H LALT     + GK
Sbjct: 3036 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3090

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 3091 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3148

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V +   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3149 GEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3205

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P     L  I +V I      S AL+  G ++TWG+      G  
Sbjct: 3206 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3263

Query: 265  STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3264 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3323

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3324 ---AL--VIGLDAVFVNRVACGSSHS 3344



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+   +  SV+ +ACG AH  A+T+      G V 
Sbjct: 4152 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4206

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4207 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4266

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4267 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4323

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              S D +R    P+    L   +I+ I+       A S  G +YTWG       G  + +
Sbjct: 4324 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 4380

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             +  P+ +        AAL   H++ +T        G +H   LS  +     RPL
Sbjct: 4381 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4421



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  +    PK V   +G   ++  I+ G
Sbjct: 4140 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4192

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4252

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + +V +      S AL+ 
Sbjct: 4253 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4307

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4308 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4367

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP  VA      L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4368 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4422

Query: 365  YTPF 368
              P 
Sbjct: 4423 NPPL 4426



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +SWG G D +LG G  H    P  +       V  + CG ++  A+T      GG + +
Sbjct: 634 AYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLT 688

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+  +LGHG   D   P  V     H      + +G  HS  ++  G +F  GDG +
Sbjct: 689 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 748

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+G+      P+ V S     V ++  G + SL L  +    Q+Y +G        +
Sbjct: 749 GKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSLALSSE---GQLYSWGKATCLGHQL 803

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +  ++  S+P++   L    IV ++ +     ALS+ G ++ WGR  N +  + CP S+
Sbjct: 804 VERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASV 860

Query: 276 PS 277
            S
Sbjct: 861 SS 862



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 151/356 (42%), Gaps = 58/356 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLF 148
            GKV++ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G +F
Sbjct: 3035 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDGKVF 3092

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + G+G  G+LGHG+  +   P  V +   K +  +ACG  HS  +       ++Y +G G
Sbjct: 3093 SWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGLG 3149

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG----- 260
            + G+LG   D +  +  P++ + L    +V + A G R A   AL+ +G +++WG     
Sbjct: 3150 EYGRLG-HGDNVTQLK-PKLVVALAGRRVVQV-ACGSRDAQTLALTEDGAVFSWGDGDFG 3206

Query: 261  ---RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               RG +  SD        S +   Q   G    L LT  GEV   G   +  L      
Sbjct: 3207 KLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3266

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P     + +  L G +VI +A GA H   VT                         
Sbjct: 3267 HVRKP-----QPIGGLRGRRVIHVAVGALHCLAVT------------------------- 3296

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
             +   +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A
Sbjct: 3297 -DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 3346



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 7/157 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G      +P  +   S   V  + CG    LALT       G+V++
Sbjct: 3197 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR-----AGEVWT 3251

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+P+    G R  + H++ G  H   V+D+G ++  GD   
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRR--VIHVAVGALHCLAVTDAGQVYAWGDNDH 3309

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            GQ G G+   +  P  V       V+++ACG  HS+ 
Sbjct: 3310 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 163/409 (39%), Gaps = 55/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            ++ WG    GQLG        +P      SL     LA G   + A+T       GK+F+
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4101

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
             G GS G+LG G       P  +            +++G  H   ++  G ++  G+G  
Sbjct: 4102 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4161

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
            G+LGHG+  S+  P  V      +V  IACG  HS  +        V  +G G+ G+L  
Sbjct: 4162 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4218

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
            G S+D++R   L +  +G   I+I   S +  ++  ++ + ++++WG       G   + 
Sbjct: 4219 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4276

Query: 268  DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  + S   L   +   G    + LT  G V   G      L         RP   
Sbjct: 4277 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4333

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +KV+ L G K+I IA         TG  H V                   +++  + T
Sbjct: 4334 --KKVAALQGKKIISIA---------TGSLHCV-----------------ACSDSGEVYT 4365

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            WG  + GQLG G       P++V      Q +   ++V CGS  T A+S
Sbjct: 4366 WGDNDEGQLGDGTVTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 4410



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 86/219 (39%), Gaps = 47/219 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            V  +G   + QLG +   +++  +  Q    L  I I G    G +S   +S +G +Y  
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 3040

Query: 260  GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
            G G N       T +V  P  LP    +    +    G  H L LT DG+V   G    G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R +  +P       V  L   K+  +A G+ HSA ++ +               
Sbjct: 3101 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGE------------- 3142

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                         + TWG GE+G+LG G+   Q+ PK+V
Sbjct: 3143 -------------LYTWGLGEYGRLGHGDNVTQLKPKLV 3168



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 19/164 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG G  G+LG G  +  L P L+   SL  V  +  G    LAL+S      G+++S
Sbjct: 740 VFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRVFAGSQFSLALSSE-----GQLYS 792

Query: 96  WGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           WG+ +   LGH  +  ++     P+ V+     R  I  ++    H   +S SG +F  G
Sbjct: 793 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKR--IVDVAVSVAHCLALSSSGEVFGWG 848

Query: 152 DGTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLV 192
                Q+      S     +P+ V S        IAC    SLV
Sbjct: 849 RNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLV 891


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 31/327 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K+++ G GT+G+LG G  ++   P+ +   S   +  +A   GG H LALT       GK
Sbjct: 3065 KLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQ-----DGK 3119

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG  +    PK +      R  I  I+ G  HS  ++ +G L+T G 
Sbjct: 3120 VFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKR--IRDIACGSGHSAAIASNGELYTWGL 3177

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  + + P  V + +   V Q+ACG R   ++ L  D     VY +G G  
Sbjct: 3178 GEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTD---GYVYSWGDGDF 3234

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P +   L+++ ++ +      S AL+  G ++TWG+      G  
Sbjct: 3235 GKLG--RGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3292

Query: 265  STSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            +   V  P +L   L        A+G  H L +T  G+V   G + HG   +     + +
Sbjct: 3293 NDHHVRKP-TLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRK 3351

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHS 348
            P       V +L+  +V +++ G+ HS
Sbjct: 3352 P-----SLVHDLEDARVNRVSCGSSHS 3373



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 147/326 (45%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K++S G G  G+LG G     + P LL       +  +A   GG H +AL+S      G 
Sbjct: 4047 KIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE-----GH 4101

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  V   Y +P    D     I  I+ G +HS  ++ +G L+T G 
Sbjct: 4102 VYSWGEGDDGKLGHGNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGK 4159

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD      P  V +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4216

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
            G+LG  +       +P     L  + +V +      S AL+  G +YTWG+G      + 
Sbjct: 4217 GKLG--RGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274

Query: 266  TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D V  P+ + +         A G  H +  +  GEV   G +  G L D    +  RP
Sbjct: 4275 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRP 4334

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4335 -----RLVHALQGKKITRVACGSAHT 4355



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G       P+L+      ++  +ACG  +  AL++      G++++
Sbjct: 589 VYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALSA-----NGELYT 643

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG--FVSDSGCLFTCGDG 153
           WGRG+ G+LGHG   D + P  VT   GH  T+ H++ G   S    V+ SG +F+ GDG
Sbjct: 644 WGRGNYGRLGHGNFDDVMTPTLVTTLKGH--TVVHVACGSGDSQTLCVTASGIVFSWGDG 701

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G   +L
Sbjct: 702 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAH---GEVYTWGKGDAYRL 758

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G   +    V  P+V   L D ++  +S       AL+ +  +Y WGR
Sbjct: 759 GHGSE--EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGR 804



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 171/415 (41%), Gaps = 63/415 (15%)

Query: 32   QVVKVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
            Q   V+ WG     QLG  +    +L      LS L  + +   GG+  L + S      
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHI--AGGSKTLFIVSQE---- 3063

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GK+++ G G++G+LG G+  +   PK + F          + +G  H+  ++  G +F+ 
Sbjct: 3064 GKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+G  G+LGHG+  S   P  +    +K +  IACG  HS  +  +    ++Y +G G+ 
Sbjct: 3124 GEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASN---GELYTWGLGEY 3180

Query: 211  GQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
            G+LG    +++ R +   L Q  IG H +  V   +   ++ AL+ +G++Y+WG G    
Sbjct: 3181 GRLGHGDTITQTRPK---LVQALIG-HRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGK 3236

Query: 263  FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
                    C   L     ++L   Q   G    L LT  GEV   G   +  L       
Sbjct: 3237 LGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHH 3296

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              +P       V  L G K+I +A GA H   VT                          
Sbjct: 3297 VRKP-----TLVEGLRGKKIIHVAVGALHCLAVT-------------------------- 3325

Query: 379  ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYA 432
            +   +  WG  +HGQ G G T     P +V +L D   NR     V CGS  + A
Sbjct: 3326 DTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNR-----VSCGSSHSIA 3375



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 172/412 (41%), Gaps = 61/412 (14%)

Query: 36   VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            ++ WG    GQLG       +L     +LS+L  +  LA G   + A+T+      GK++
Sbjct: 3996 IYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQ-LAGGEQTLFAVTA-----DGKIY 4049

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            S G G++G+LG G     + P  +            +S+G  H   +S  G +++ G+G 
Sbjct: 4050 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGD 4109

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
             G+LGHG+  S+  P  +   +   +  IACG  HS  +        +Y +G G+ G+LG
Sbjct: 4110 DGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITS---AGWLYTWGKGRYGRLG 4166

Query: 215  --VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
               S D++R    P+V   L D +++ ++  +GD ++  ++ + ++++WG        RG
Sbjct: 4167 HGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4222

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +    V       + L   +   G    + LT  G V   G   +  L         RP
Sbjct: 4223 GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRP 4282

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  KV+ L G K+I IA G+ H    + K                            
Sbjct: 4283 -----RKVAALQGKKIISIATGSLHCVACSDKGE-------------------------- 4311

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            + TWG  + GQLG G T     P++V+     Q +     V CGS  T A S
Sbjct: 4312 VFTWGDNDEGQLGDGTTSALHRPRLVH---ALQGKKIT-RVACGSAHTLAWS 4359



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 12/216 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G   D ++P L+      +V  +ACG      L   +S   G VF
Sbjct: 640 ELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTAS---GIVF 696

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG G  G+LG G    +  PK V    D     +  +  G   S  ++  G ++T G G
Sbjct: 697 SWGDGDYGKLGRGGTDGSKTPKIVDKLLD---INVVKVFCGSQFSAALTAHGEVYTWGKG 753

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              +LGHG       P  + S  ++ V  ++ G  H L L +D     VYG+G    GQ+
Sbjct: 754 DAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQF---VYGWGRNDYGQI 810

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
             +   I  +S P +   L    ++G+++   +S A
Sbjct: 811 DPTLGPI--ISEPTLCPTLSSKTVIGLASGPTQSFA 844



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  L C    ++ L+     + G V++   GS  Q  + + V     KP+T    H    
Sbjct: 526 IKQLCCTERALMILS-----LNGNVYNMYHGSETQ--YPQRVHGFSDKPITMIASH---- 574

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
               A   H   ++  GC+++ G+G  G+LGHGD  S+  P  + + + KN+  IACG  
Sbjct: 575 ----ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGST 630

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
           +S  L  +    ++Y +G G  G+LG    D + + +L   T+  H +  V   +   ++
Sbjct: 631 YSAALSAN---GELYTWGRGNYGRLGHGNFDDVMTPTL-VTTLKGHTVVHVACGSGDSQT 686

Query: 248 AALSAEGHLYTWGRG 262
             ++A G +++WG G
Sbjct: 687 LCVTASGIVFSWGDG 701



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 111/270 (41%), Gaps = 52/270 (19%)

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSG 208
           +G    + HG    +  P +V  F +K +  IA     +H L L +D C    VY +G+G
Sbjct: 542 NGNVYNMYHGSETQY--PQRVHGFSDKPITMIASHADGKHYLALTQDGC----VYSWGNG 595

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
             G+LG   D I S   P++   L +  I+ I+     SAALSA G LYTWGRG      
Sbjct: 596 DGGRLG-HGDTI-SYDEPKLIEALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLG 653

Query: 263 FNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             +  DV  P  + +    ++       G +  L +T  G V   G   +G L       
Sbjct: 654 HGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDG 713

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           S  P     + V  L  + V+++  G++ SA +T                          
Sbjct: 714 SKTP-----KIVDKLLDINVVKVFCGSQFSAALTA------------------------- 743

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +  + TWG G+  +LG G+     +PKV+
Sbjct: 744 -HGEVYTWGKGDAYRLGHGSEEHVRYPKVI 772



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 109/280 (38%), Gaps = 58/280 (20%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S+P    +     + Q+ C  R  ++L    L   VY    G   Q             P
Sbjct: 513 STPFYCDAIAELGIKQLCCTERALMIL---SLNGNVYNMYHGSETQY------------P 557

Query: 227 QVTIGLHDIEIVGIS--ANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS 278
           Q   G  D  I  I+  A+G    AL+ +G +Y+WG G         T   + P+ + + 
Sbjct: 558 QRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEAL 617

Query: 279 L--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
           L  +    A G  +   L+ +GE+   G  ++G L          P       V+ L G 
Sbjct: 618 LEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTP-----TLVTTLKGH 672

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
            V+ +A G+  S  +                         +  +  + +WG G++G+LG 
Sbjct: 673 TVVHVACGSGDSQTL------------------------CVTASGIVFSWGDGDYGKLGR 708

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G T     PK+V   D+  + +  ++VFCGS F+ A++ H
Sbjct: 709 GGTDGSKTPKIV---DKLLDINV-VKVFCGSQFSAALTAH 744


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 159/337 (47%), Gaps = 34/337 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG  + G+LG G   D   P+L+   S +++ ++ACG  H  A+T     + G ++
Sbjct: 325 EVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVT-----LSGDLY 379

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    ++ IS G  H+  V+ SG LFT G
Sbjct: 380 TWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 437

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P ++ S       Q ACG+ H+  +++  +GN         ++
Sbjct: 438 DGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKL 497

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG      + V  P   + L +     ++     + ALS  GH+YT G  
Sbjct: 498 FTWGDGDKGRLGHGDKESKLV--PTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSC 555

Query: 263 F-----NSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                 N+ +D   P  +   LS S   + A G  HV VLT   EV   G   +G L   
Sbjct: 556 VYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHG 615

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +      P  V       L   +V  IA G   +A +
Sbjct: 616 DTNDRNTPTLVEA-----LKDKQVKSIACGTNFTAAI 647



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 182/407 (44%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H   +T       G+VFSWG  S G+LGHG  VD+ 
Sbjct: 292 DSLLPKALESAVVLDVQNIACGGEHAAMVTKQ-----GEVFSWGGESGGRLGHG--VDSD 344

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            P P          I  ++ G  H+  V+ SG L+T GDGT  +G LGHG+  SH  P +
Sbjct: 345 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKR 404

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR +SVSLP+   
Sbjct: 405 VNGPLEGIHVSSISCGPWHTAVVTS---SGQLFTFGDGTFGVLG-HGDR-KSVSLPREIE 459

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNSTSDVNCPQS--LP 276
            L  +  V  +     +AA+             + G L+TWG G          +S  +P
Sbjct: 460 SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVP 519

Query: 277 SSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           + +      +F Q A G +  + L+  G V  +G   +G L + +   +   L   +E  
Sbjct: 520 TRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQ---ADGKLPTPVE-- 574

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L    V +IA GA H AV+T +                            + TWG G 
Sbjct: 575 GKLSKSFVEEIACGAYHVAVLTSRTE--------------------------VFTWGKGA 608

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           +G LG G+T D+  P +V        +D Q++ + CG+ FT AI  H
Sbjct: 609 NGCLGHGDTNDRNTPTLVEAL-----KDKQVKSIACGTNFTAAICLH 650


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 170/387 (43%), Gaps = 54/387 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           ++++ WG  + GQLG G + +E  L+P  +     S+V+ +ACG  H L LT+      G
Sbjct: 1   MELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTA-----SG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           KV++ G     QLGH    +    +P+   +   Y IT I+ G  HS  +S+ G +F+ G
Sbjct: 56  KVYACGSNDYSQLGH----ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWG 111

Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           D   GQLGH  D      P  V + V+K V QIACG  HSL L   C G ++Y +GS   
Sbjct: 112 DNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLAL--TCCG-ELYSWGSNLY 168

Query: 211 GQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           GQLGVS  + ++  + P     L  I +  I+  G+ S  +S    ++ WGR      G 
Sbjct: 169 GQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N  ++   P  L +  +L     A G    + LT +G V   G   +G L      +   
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEML 288

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P       V  L G  + Q+A G  H+                         + ++    
Sbjct: 289 P-----RMVMELMGSTISQVACGNRHT-------------------------LALVPSRG 318

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            I  +G G  GQLG  NT     P++V
Sbjct: 319 RIYGFGLGSSGQLGTRNTKSLNLPQLV 345



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG    +D + S   + L++L    VS +ACGG H   ++  S+V G 
Sbjct: 159 ELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFG- 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
               WGR + GQLG  +  +  YP  +         +  ++ G   S F++  G +FTCG
Sbjct: 218 ----WGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTIEGGVFTCG 271

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      ++YGFG G  G
Sbjct: 272 AGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS--RGRIYGFGLGSSG 329

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S++LPQ+ IG
Sbjct: 330 QLGTRN--TKSLNLPQLVIG 347


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 27/334 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
           V++ G    GQ G G   +   ++  +  LS +  ++M+A   G  H+LA+ S      G
Sbjct: 523 VFTCGLNKSGQCGNGTFEERVIIATPVRALSGIV-INMVAAANGCEHMLAVAS-----DG 576

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            V+SWG    GQLG G  +   +   +      +Y IT  +  ++HS  VS +G L   G
Sbjct: 577 AVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFG 636

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
               GQLG    +   +P  V S  ++ + ++ACG+ H++ +     G +VY FG    G
Sbjct: 637 MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITS---GGEVYSFGKNDYG 693

Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLG+   R ++  +L + ++G  D +IV +S     +  +S +G L TWGR      G  
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753

Query: 265 STSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--SST 320
           S    N  Q +P  LS     A+ G  H L+L  +G V++ G ++ G L    R   S+ 
Sbjct: 754 SKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSAD 813

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            PL V    ++N    +V++IAAG   S ++TG+
Sbjct: 814 LPLPVPSNSLAN---DEVVRIAAGFYSSYILTGR 844



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 136/333 (40%), Gaps = 54/333 (16%)

Query: 82  LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
           L S +S    ++FS G+ + G+L  G        + V FF      I  I+ G      V
Sbjct: 460 LLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAK--AIRDIAGGNEVLAVV 517

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
              G +FTCG    GQ G+G +      ++PV+  S +  N+   A G  H L +  D  
Sbjct: 518 MKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASD-- 575

Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLY 257
              VY +G   RGQLG+    I     P++   L +   I   + +   SA +S+ G L 
Sbjct: 576 -GAVYSWGYNDRGQLGLGST-ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELL 633

Query: 258 TWGR------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
            +G       G + T   + PQ L  SLS    ++ A G  H + +T  GEV   G + +
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQ-LVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDY 692

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISY 365
           G L               L    N+    +++ + G     +V    G +H V       
Sbjct: 693 GQL--------------GLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTV------- 731

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
                      I+E   ++TWG  ++GQLG+G+
Sbjct: 732 ----------TISEKGKLITWGRNDYGQLGIGS 754



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 52/306 (16%)

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           D   LF+CG   +G+L  G   S S    V  F  K +  IA G     V++KD     V
Sbjct: 467 DDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKD---GAV 523

Query: 203 YGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +  G  K GQ G    ++R+  ++ P   +    I +V  +   +   A++++G +Y+WG
Sbjct: 524 FTCGLNKSGQCGNGTFEERV-IIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWG 582

Query: 261 R------GFNST-SDVNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
                  G  ST S  + P+   SL      + AA+ ++H  V++ +GE+LM G +  G 
Sbjct: 583 YNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQ 642

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L          P     + V +L    + ++A G  H+  +T                  
Sbjct: 643 LGLDHTQHQHTP-----QLVDSLSSQVITEVACGLYHTIAITSGGE-------------- 683

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQNRDTQLEVFCGSG 428
                       + ++G  ++GQLGLG+  +   P +V  +LG   ++ +  + V CG  
Sbjct: 684 ------------VYSFGKNDYGQLGLGHARNMKVPTLVKTSLG---ESDEKIVAVSCGYY 728

Query: 429 FTYAIS 434
            T  IS
Sbjct: 729 HTVTIS 734



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 22/170 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGG 91
           +V+S+G    GQLG G   +   P L+  S   S   +  ++CG  H + ++       G
Sbjct: 683 EVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISE-----KG 737

Query: 92  KVFSWGRGSSGQLGHGEMV---DALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           K+ +WGR   GQLG G       A Y P P++        I   S G  H+  +  +G +
Sbjct: 738 KLITWGRNDYGQLGIGSKDHKNSAQYVPLPLS------SKIKTASCGCYHTLILMSNGRV 791

Query: 148 FTCGDGTFGQLGHGDYRSHSS----PVKVSSFVNKNVHQIACGMRHSLVL 193
              G    GQLG G     S+    PV  +S  N  V +IA G   S +L
Sbjct: 792 MVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYIL 841



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 10/117 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+ +WG    GQLG G    + S Q + L   S +   +CG  H L L S      G+V 
Sbjct: 738 KLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMS-----NGRVM 792

Query: 95  SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGC 146
            +GR + GQLG G   +  A  P PV         +  I+AG+  S  +   S  GC
Sbjct: 793 VFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSGEGC 849


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 33/328 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K+++ G GT+G+LG G  ++   P+ +   S   +  +A   GG H LALT       GK
Sbjct: 2642 KLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQ-----DGK 2696

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG  +    PK +      R  I  I+ G  HS  ++ +G L+T G 
Sbjct: 2697 VFSWGEGEDGKLGHGNCISLDKPKLIEILKSKR--IRDIACGSGHSAAIASNGELYTWGL 2754

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKD-CLGNQVYGFGSGK 209
            G +G+LGHGD  + + P  V + V + V Q+ACG R   ++ L  D C    VY +G G 
Sbjct: 2755 GEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGC----VYSWGDGD 2810

Query: 210  RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
             G+LG  +        P     L+ + ++ +      S AL+  G ++TWG+      G 
Sbjct: 2811 FGKLG--RGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGH 2868

Query: 264  NSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
             +   V  P +L   L        A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2869 GNDHHVRKP-TLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNR 2927

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            +P       V +L+  +V +++ G+ HS
Sbjct: 2928 KP-----SLVHDLEDARVNRVSCGSSHS 2950



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G       P+L+      ++  +ACG  +  AL++      G++++
Sbjct: 168 VYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSA-----SGELYT 222

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG--FVSDSGCLFTCGDG 153
           WGRG+ G+LGHG   D L P  VT   GH  T+ H++ G   S    V+ SG +F+ GDG
Sbjct: 223 WGRGNYGRLGHGNFDDVLTPTLVTTLKGH--TVVHVACGSGDSQTLCVTASGIVFSWGDG 280

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G   +L
Sbjct: 281 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAH---GEVYTWGKGDAYRL 337

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G   +    V  P+V   L D +I  +S       AL+ +  +Y WGR
Sbjct: 338 GHGSE--EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGR 383



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 126/257 (49%), Gaps = 23/257 (8%)

Query: 69  VSMLA--CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHR 125
           ++M+A    G H LALT       G V+SWG G  G+LGHG+ V    PK + +  D + 
Sbjct: 147 ITMIASHADGKHYLALTQ-----DGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKN- 200

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             I  I+ G  +S  +S SG L+T G G +G+LGHG++    +P  V++     V  +AC
Sbjct: 201 --IVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVAC 258

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
           G   S  L     G  V+ +G G  G+LG  +        P++   L DI +V +   G 
Sbjct: 259 GSGDSQTLCVTASG-IVFSWGDGDYGKLG--RGGTDGSKTPKIVDKLLDINVVKVFCGGQ 315

Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGD 297
            SAAL+A G +YTWG+      G  S   V  P+ + S         ++G  H+L LT D
Sbjct: 316 FSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTED 375

Query: 298 GEVLMLGGSHHGMLSDP 314
             V   G + +G + DP
Sbjct: 376 QFVYGWGRNDYGQI-DP 391



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 172/419 (41%), Gaps = 71/419 (16%)

Query: 32   QVVKVWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVI 89
            Q   V+ WG     QLG G    ++   + +  LS L  + +   GG+  L + S     
Sbjct: 2587 QQSAVYVWGLNDKDQLG-GLKGSKIKLPIYSEVLSKLKPIHI--AGGSKTLFIVSQE--- 2640

Query: 90   GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
             GK+++ G G++G+LG G+  +   PK + F          + +G  H+  ++  G +F+
Sbjct: 2641 -GKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 2699

Query: 150  CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
             G+G  G+LGHG+  S   P  +    +K +  IACG  HS  +  +    ++Y +G G+
Sbjct: 2700 WGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASN---GELYTWGLGE 2756

Query: 210  RGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
             G+LG    +++ R +   L Q  +G   +++    A G R A   AL+ +G +Y+WG G
Sbjct: 2757 YGRLGHGDTITQTRPK---LVQALVGQRVVQV----ACGSRDAQTMALTTDGCVYSWGDG 2809

Query: 263  ----FNSTSDVNCPQSLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                        C   L     + L   Q   G    L LT  GEV   G   +  L   
Sbjct: 2810 DFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 2869

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                  +P       V  L G K+I +A GA H   VT                      
Sbjct: 2870 NDHHVRKP-----TLVEGLRGKKIIHVAVGALHCLAVT---------------------- 2902

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG  +HGQ G G T     P +V +L D   NR     V CGS  + A
Sbjct: 2903 ----DTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNR-----VSCGSSHSIA 2952



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 12/216 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G   D L+P L+      +V  +ACG      L   +S   G VF
Sbjct: 219 ELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTAS---GIVF 275

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG G  G+LG G    +  PK V    D     +  +  G   S  ++  G ++T G G
Sbjct: 276 SWGDGDYGKLGRGGTDGSKTPKIVDKLLD---INVVKVFCGGQFSAALTAHGEVYTWGKG 332

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              +LGHG       P  + S  +K +  ++ G  H L L +D     VYG+G    GQ+
Sbjct: 333 DAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQF---VYGWGRNDYGQI 389

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
             +   +  VS P +   L    ++G+++   +S A
Sbjct: 390 DPTLGPV--VSEPTLCPTLSSKTVIGLASGPTQSFA 423



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 7/165 (4%)

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
           G++  + HG   +  YP  V  F     T+    A   H   ++  GC+++ G+G  G+L
Sbjct: 122 GNAYNMYHGS--ETQYPLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRL 179

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK- 217
           GHGD  S+  P  + S ++KN+  IACG  +S  L       ++Y +G G  G+LG    
Sbjct: 180 GHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAAL---SASGELYTWGRGNYGRLGHGNF 236

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           D + + +L   T+  H +  V   +   ++  ++A G +++WG G
Sbjct: 237 DDVLTPTL-VTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 280



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 58/257 (22%)

Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSGKRGQLG----VSKDRIR 221
           P++V  F +K +  IA     +H L L +D C    VY +G+G  G+LG    VS D   
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHYLALTQDGC----VYSWGNGDGGRLGHGDTVSYDE-- 189

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
               P++   L D  IV I+     SAALSA G LYTWGRG        +  DV  P  +
Sbjct: 190 ----PKLIESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLV 245

Query: 276 PS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            +    ++       G +  L +T  G V   G   +G L       S  P     + V 
Sbjct: 246 TTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP-----KIVD 300

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L  + V+++  G + SA +T                           +  + TWG G+ 
Sbjct: 301 KLLDINVVKVFCGGQFSAALTA--------------------------HGEVYTWGKGDA 334

Query: 392 GQLGLGNTCDQIHPKVV 408
            +LG G+     +PKV+
Sbjct: 335 YRLGHGSEEHVRYPKVI 351



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 106/278 (38%), Gaps = 54/278 (19%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S+P          + Q+ C  R  ++L    L    Y    G   Q  +   R+   S  
Sbjct: 92  STPFYCDPIAGLGIKQLCCTERSLMIL---SLNGNAYNMYHGSETQYPL---RVHGFSDK 145

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS 280
            +T+       +   A+G    AL+ +G +Y+WG G         T   + P+ + S L 
Sbjct: 146 PITM-------IASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLD 198

Query: 281 FSQA--ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
            +    A G  +   L+  GE+   G  ++G L          P       V+ L G  V
Sbjct: 199 KNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTP-----TLVTTLKGHTV 253

Query: 339 IQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
           + +A G+  S  +                         +  +  + +WG G++G+LG G 
Sbjct: 254 VHVACGSGDSQTL------------------------CVTASGIVFSWGDGDYGKLGRGG 289

Query: 399 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           T     PK+V   D+  + +  ++VFCG  F+ A++ H
Sbjct: 290 TDGSKTPKIV---DKLLDINV-VKVFCGGQFSAALTAH 323


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 184/413 (44%), Gaps = 72/413 (17%)

Query: 48  GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
           G G   D L P+ L  + +  V  +ACGG H   +T       G+VFSWG  S G+LGHG
Sbjct: 285 GFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQ-----GEVFSWGEESGGRLGHG 339

Query: 108 EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRS 165
              D L+PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  S
Sbjct: 340 VDSDVLHPKLIDSLSN--INIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 397

Query: 166 HSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           H  P +V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR +SVS
Sbjct: 398 HWVPKRVNGPLEGIHVSSISCGPWHTAVVTS---SGQLFTFGDGTFGVLG-HGDR-KSVS 452

Query: 225 LPQVTIGLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST-----S 267
           +P+    L  +  V  +     +AA+             + G L+TWG G          
Sbjct: 453 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 512

Query: 268 DVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           +     +  ++L   +F Q A G +  + LT  G V  +G   +G L +P+      P  
Sbjct: 513 EAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNR 571

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V       L    V +IA GA H AV+T K                            + 
Sbjct: 572 VE----GRLSKSFVEEIACGAYHVAVLTSKTE--------------------------VY 601

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           TWG G +G+LG G+T D+  P +V        +D Q++ + CG+ FT AI  H
Sbjct: 602 TWGKGANGRLGHGDTDDRNFPSLVEA-----LKDKQVKSIACGTNFTAAICLH 649



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 160/337 (47%), Gaps = 34/337 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG  + G+LG G   D L P+L++  S  ++ ++ACG  H  A+T     + G ++
Sbjct: 324 EVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVT-----LSGDLY 378

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    ++ IS G  H+  V+ SG LFT G
Sbjct: 379 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 436

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 437 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 496

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      + V  P     L +     ++     + AL+  GH+YT    
Sbjct: 497 FTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSP 554

Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N  +D   P  +   LS S   + A G  HV VLT   EV   G   +G L   
Sbjct: 555 VYGQLGNPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 614

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +      P       V  L   +V  IA G   +A +
Sbjct: 615 DTDDRNFP-----SLVEALKDKQVKSIACGTNFTAAI 646


>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
 gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
          Length = 1878

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 149/310 (48%), Gaps = 30/310 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  T+  LG G  + E + P  +N  S   V  ++CG +H   L    S   G+V
Sbjct: 60  QLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISEASGRV 119

Query: 94  FSWGRGSSGQLGH-------------GEMVDALY-PKPVTFFDGHRYTITHISAGWNHSG 139
           ++ G G  G+LG+              ++ ++ Y P P          I+ IS G NHS 
Sbjct: 120 YTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTPVPCIVNFPFNAKISRISCGANHSL 179

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCL 198
            +SDSG +F  G G +G LG G+     SPVK+ +   +K V  IA G RHSL   +D  
Sbjct: 180 ALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNED-- 237

Query: 199 GNQVYGFGSGKRGQLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
             QV+ +GS   G+LG      +++V  P     L    I  ++A    S  + + G++Y
Sbjct: 238 -GQVFAWGSNSNGRLGTGGSYGMKTV--PTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294

Query: 258 TWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           TWG       G  + SD N P+ +   SSL F Q  LG  + + L+  GEV + G   H 
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQHE 354

Query: 310 MLSDPERVSS 319
           ++S P ++ +
Sbjct: 355 IISLPTKIDA 364



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 38/256 (14%)

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP-VKVSSFVNKN----- 179
           +++  I+ G +H+  +   G +F  GD  +GQLG    R  S    K  SF+N+      
Sbjct: 488 WSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKF 547

Query: 180 ---VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
              + ++ACG  HSL    D  GN  + +G G RGQLG     IR++  P   + L ++ 
Sbjct: 548 SEPIRRVACGSWHSLCC--DIKGN-CFSWGRGDRGQLGTGA--IRNLYEPAGIVTLKNVI 602

Query: 237 -----------IVGISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCPQSLP 276
                      IV     G++       G L+ WG G             S +  P+ L 
Sbjct: 603 EVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN 662

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
                 + ALG +H LVLT  GE++  G  ++G L      S + P+ +       + GV
Sbjct: 663 LGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFP----IKGV 718

Query: 337 KVIQIAAGAEHSAVVT 352
           +++ IA G+ HS  V+
Sbjct: 719 QIVDIAVGSYHSMAVS 734



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 21/226 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++WG G  G LGTG L+D  SP  +    +   V  +A G  H L          G+VF
Sbjct: 187 VFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNE-----DGQVF 241

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S+G+LG G     +   P       +Y IT ++AG +HSG +   G ++T G+G 
Sbjct: 242 AWGSNSNGRLGTGGSY-GMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIYTWGNGG 300

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            G+LGHG     + P ++    +    Q+  G  +S+ L +     +VY +G+ +     
Sbjct: 301 SGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQ---SGEVYIWGAKQH---- 353

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                   +SLP   I   D  I  I++    S A+    ++Y W 
Sbjct: 354 ------EIISLP-TKIDAFDSHICHINSGPYISFAMDVRHNIYLWN 392



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 36/261 (13%)

Query: 36  VWSWGAGTDGQLGT---------GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           +++WG    GQLG          G  ++    +   +     +  +ACG  H L      
Sbjct: 509 IFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEPIRRVACGSWHSLCCD--- 565

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD-------GHRYT---ITHISAGWN 136
             I G  FSWGRG  GQLG G + +   P  +           G  Y+   +  I+ G N
Sbjct: 566 --IKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTG-N 622

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVL 193
                 +SG L+  GDG  G+LG GD+   S   +P  ++  +   + ++A G  H+LVL
Sbjct: 623 KDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN--LGTPIIKVALGSSHTLVL 680

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                  ++  +G+G  G+LG +  +  S  + ++   +  ++IV I+     S A+S+ 
Sbjct: 681 ---TASGELITWGAGYYGRLGTNSTKSHSNPI-KIRFPIKGVQIVDIAVGSYHSMAVSSL 736

Query: 254 GHLYTWGRGFN--STSDVNCP 272
           G L+ WG+  N  S  DV  P
Sbjct: 737 GDLWVWGKAENVLSEKDVLTP 757



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 30/283 (10%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSP-----SSVIG 90
           +SWG G  GQLGTG + +   P  ++ L ++  V+      A ++A  +       ++  
Sbjct: 571 FSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTGNKDLDTINS 630

Query: 91  GKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G ++ WG G  G+LG G+ ++ +    P     G    I  ++ G +H+  ++ SG L T
Sbjct: 631 GDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT--PIIKVALGSSHTLVLTASGELIT 688

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGS 207
            G G +G+LG    +SHS+P+K+  F  K V    IA G  HS+ +    LG+    +  
Sbjct: 689 WGAGYYGRLGTNSTKSHSNPIKI-RFPIKGVQIVDIAVGSYHSMAV--SSLGDL---WVW 742

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           GK   +   KD +      ++        I  I A GD S A++  G L+ WG   + T 
Sbjct: 743 GKAENVLSEKDVLTPYIFAKLESPSGVPRIYSIHAFGDVSYAITQSGVLWIWGPENSETE 802

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           ++   Q L SS+               TG  E+++L G+  G+
Sbjct: 803 NI---QGLESSIKIKSH----------TGRAEMILLPGNAIGV 832



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 45/279 (16%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG---------HGEMVDALYPKPV 118
           SV  +ACG +H L L     V GG +F+WG    GQLG         +G+  ++   +P 
Sbjct: 489 SVRQIACGTSHTLLL-----VYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPT 543

Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
                    I  ++ G  HS      G  F+ G G  GQLG G  R+   P  + +   K
Sbjct: 544 EI--KFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTL--K 599

Query: 179 NVHQIACGMRHSLVLLKDCL--GNQ---------VYGFGSGKRGQLGVSKDRIRS-VSLP 226
           NV ++A G  +S  ++  C+  GN+         ++ +G G  G+LG+    ++S ++ P
Sbjct: 600 NVIEVAGGELYSACIVA-CITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAP 658

Query: 227 Q-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSL 279
           + + +G     I+ ++     +  L+A G L TWG G+      NST   + P  +   +
Sbjct: 659 RHLNLG---TPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFPI 715

Query: 280 SFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
              Q    A+G  H + ++  G+ L + G    +LS+ +
Sbjct: 716 KGVQIVDIAVGSYHSMAVSSLGD-LWVWGKAENVLSEKD 753



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 91/232 (39%), Gaps = 42/232 (18%)

Query: 123 GHRYTITHISAGWNHSGFVS---DSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNK 178
           GH +T    ++  NH   V+   + G L+  G  T   LG G +    + P+KV+ F   
Sbjct: 36  GHSFT--RAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL 93

Query: 179 NVHQIACGMRHSLVLLKDC--LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            V Q++CG  H+ VL+K       +VY  G G RG+LG ++                   
Sbjct: 94  EVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTR------------------- 134

Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
             G +  G+           YT          V C  + P +   S+ + G NH L L+ 
Sbjct: 135 --GYTEFGNEHDKNDLNESWYT---------PVPCIVNFPFNAKISRISCGANHSLALSD 183

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            G V   G   +G L   E      P+ +           KV+ IAAGA HS
Sbjct: 184 SGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDK----KVLHIAAGARHS 231


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 149/310 (48%), Gaps = 30/310 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  T+  LG G  + E + P  +N  S   V  ++CG +H   L    S   G+V
Sbjct: 60  QLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISEASGRV 119

Query: 94  FSWGRGSSGQLGH-------------GEMVDALY-PKPVTFFDGHRYTITHISAGWNHSG 139
           ++ G G  G+LG+              ++ ++ Y P P          I+ IS G NHS 
Sbjct: 120 YTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCGANHSL 179

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCL 198
            +SDSG +F  G G +G LG G+     SPVK+ +   +K V  IA G RHSL   +D  
Sbjct: 180 ALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNED-- 237

Query: 199 GNQVYGFGSGKRGQLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
             QV+ +GS   G+LG      +++V  P     L    I  ++A    S  + + G++Y
Sbjct: 238 -GQVFAWGSNSNGRLGTGGSYGMKTV--PTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294

Query: 258 TWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           TWG       G  + SD N P+ +   SSL F Q  LG  + + L+  GEV + G   H 
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQHE 354

Query: 310 MLSDPERVSS 319
           ++S P ++ +
Sbjct: 355 IISLPTKIDA 364



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 38/256 (14%)

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP-VKVSSFVNKN----- 179
           +++  I+ G +H+  +   G +F  GD  +GQLG    R  S    K  SF+N+      
Sbjct: 488 WSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKF 547

Query: 180 ---VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
              + ++ACG  HSL    D  GN  + +G G RGQLG     IR++  P   + L ++ 
Sbjct: 548 SEPIRRVACGSWHSLCC--DIKGN-CFSWGRGDRGQLGTGA--IRNLYEPAGIVTLKNVI 602

Query: 237 -----------IVGISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCPQSLP 276
                      IV     G++       G L+ WG G             S +  P+ L 
Sbjct: 603 EVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN 662

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
                 + ALG +H L LT  GE++  G  ++G L      S + P+ +       + GV
Sbjct: 663 LGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFP----IKGV 718

Query: 337 KVIQIAAGAEHSAVVT 352
           +++ IA G+ HS  V+
Sbjct: 719 QIVDIAVGSYHSMAVS 734



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 21/226 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++WG G  G LGTG L+D  SP  +    +   V  +A G  H L          G+VF
Sbjct: 187 VFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNE-----DGQVF 241

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S+G+LG G     +   P       +Y IT ++AG +HSG +   G ++T G+G 
Sbjct: 242 AWGSNSNGRLGTGGSY-GMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIYTWGNGG 300

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            G+LGHG     + P ++    +    Q+  G  +S+ L +     +VY +G+ +     
Sbjct: 301 SGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQ---SGEVYIWGAKQH---- 353

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                   +SLP   I   D  I  I++    S A+    ++Y W 
Sbjct: 354 ------EIISLP-TKIDAFDSHICHINSGPYISFAMDVRHNIYLWN 392



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 36/261 (13%)

Query: 36  VWSWGAGTDGQLGT---------GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           +++WG    GQLG          G  ++    +   +     +  +ACG  H L      
Sbjct: 509 IFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRRVACGSWHSLCCD--- 565

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD-------GHRYT---ITHISAGWN 136
             I G  FSWGRG  GQLG G + +   P  +           G  Y+   +  I+ G N
Sbjct: 566 --IKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTG-N 622

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVL 193
                 +SG L+  GDG  G+LG GD+   S   +P  ++  +   + ++A G  H+L L
Sbjct: 623 KDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN--LGTPIIKVALGSSHTLAL 680

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                  ++  +G+G  G+LG +  +  S  + ++   +  ++IV I+     S A+S+ 
Sbjct: 681 ---TASGELITWGAGYYGRLGTNSTKSHSNPI-KIRFPIKGVQIVDIAVGSYHSMAVSSL 736

Query: 254 GHLYTWGRGFN--STSDVNCP 272
           G L+ WG+  N  S  DV  P
Sbjct: 737 GDLWVWGKAENVLSEKDVLTP 757



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 22/296 (7%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSP-----SSVIG 90
           +SWG G  GQLGTG + +   P  ++ L ++  V+      A ++A  +       ++  
Sbjct: 571 FSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTGNKDLDTINS 630

Query: 91  GKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G ++ WG G  G+LG G+ ++ +    P     G    I  ++ G +H+  ++ SG L T
Sbjct: 631 GDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT--PIIKVALGSSHTLALTASGELIT 688

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGS 207
            G G +G+LG    +SHS+P+K+  F  K V    IA G  HS+ +    LG+    +  
Sbjct: 689 WGAGYYGRLGTNSTKSHSNPIKI-RFPIKGVQIVDIAVGSYHSMAV--SSLGDL---WVW 742

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           GK   +   KD +      ++        I  I A GD S A++  G L+ WG   + T 
Sbjct: 743 GKAENVLSEKDVLTPYIFAKLESPSGIPRIYSIHAFGDVSYAITQSGVLWIWGPENSETE 802

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH-GMLSDPERVSSTRP 322
           ++   Q L +S+   ++  G   ++VL G+   +    +HH  +L+  E VS   P
Sbjct: 803 NI---QGLETSIKI-KSHTGRAEMIVLPGNAIGVSGSTTHHVCLLASGEVVSWGDP 854



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 45/279 (16%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG---------HGEMVDALYPKPV 118
           SV  +ACG +H L L     V GG +F+WG    GQLG          G+  ++   +P 
Sbjct: 489 SVRQIACGTSHTLLL-----VYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPT 543

Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
                    I  ++ G  HS      G  F+ G G  GQLG G  R+   P  + +   K
Sbjct: 544 EI--KFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTL--K 599

Query: 179 NVHQIACGMRHSLVLLKDCL--GNQ---------VYGFGSGKRGQLGVSKDRIRS-VSLP 226
           NV ++A G  +S  ++  C+  GN+         ++ +G G  G+LG+    ++S ++ P
Sbjct: 600 NVIEVAGGELYSACIVA-CITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAP 658

Query: 227 Q-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSL 279
           + + +G     I+ ++     + AL+A G L TWG G+      NST   + P  +   +
Sbjct: 659 RHLNLG---TPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFPI 715

Query: 280 SFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
              Q    A+G  H + ++  G+ L + G    +LS+ +
Sbjct: 716 KGVQIVDIAVGSYHSMAVSSLGD-LWVWGKAENVLSEKD 753



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 91/232 (39%), Gaps = 42/232 (18%)

Query: 123 GHRYTITHISAGWNHSGFVS---DSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNK 178
           GH +T    ++  NH   V+   + G L+  G  T   LG G +    + P+KV+ F   
Sbjct: 36  GHSFT--RAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL 93

Query: 179 NVHQIACGMRHSLVLLKDC--LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            V Q++CG  H+ VL+K       +VY  G G RG+LG ++                   
Sbjct: 94  EVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTR------------------- 134

Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
             G +  G+           YT          + C  + P +   S+ + G NH L L+ 
Sbjct: 135 --GHTEFGNEHDKNDLNESWYT---------PIPCIVNFPFNAKISRISCGANHSLALSD 183

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            G V   G   +G L   E      P+ +           KV+ IAAGA HS
Sbjct: 184 SGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDK----KVLHIAAGARHS 231


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 194/438 (44%), Gaps = 85/438 (19%)

Query: 36  VWSWGAGT-DGQLGTGRLH----------DELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           V+ WG G  DG +G G +H          D L P+ L  + +  V  +ACGG H + +T 
Sbjct: 251 VFMWGEGIGDGIMGAG-VHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTK 309

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G+VFSWG     +LGHG  VD  +PK +    G    I  ++ G  HS  V+ S
Sbjct: 310 K-----GEVFSWGEECGSRLGHGVEVDVSHPKLIDALCG--MNIELVACGEYHSCAVTLS 362

Query: 145 GCLFTCGDGTF--GQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQ 201
           G L+T GDGT   G LGHG   SH  P KVS  +   +V  +ACG  H+ V+       Q
Sbjct: 363 GDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTS---AGQ 419

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----------- 250
           ++ FG G  G LG       S+S+P+    L     + ++     +AA+           
Sbjct: 420 LFTFGDGTFGALGHGDHS--SMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFE 477

Query: 251 ----SAEGHLYTWGRG------FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDG 298
               S+ G L+TWG G               PQS+ + +  SF Q A G N  + LT  G
Sbjct: 478 SSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSG 537

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            V  +G + +G L  P  V+  +  ++   K++N     V ++A G+ H AV+T K    
Sbjct: 538 RVYTMGSAVYGQLGSP--VADGKIPTLVEGKIAN---SFVEEVACGSYHVAVLTSKTE-- 590

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                                   + TWG G +GQLG G+   +  P +V+   + Q ++
Sbjct: 591 ------------------------VYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKN 626

Query: 419 TQLEVFCGSGFTYAISRH 436
               V CG  FT AIS H
Sbjct: 627 ----VVCGLNFTAAISLH 640



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG     +LG G   D   P+L++     ++ ++ACG  H  A+T     + G ++
Sbjct: 312 EVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVT-----LSGDLY 366

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  SG LGHG       PK V+   +G    +++++ G  H+  V+ +G LFT G
Sbjct: 367 TWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMH--VSYVACGPWHTAVVTSAGQLFTFG 424

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG------------ 199
           DGTFG LGHGD+ S S P +V +   +   ++ACG+ H+  +++  +             
Sbjct: 425 DGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSS 484

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +++ +G G +G+LG      R V  PQ    L +     ++   + S AL+  G +YT 
Sbjct: 485 GKLFTWGDGDKGRLGHGDKEPRLV--PQSVTALINESFCQVACGHNLSVALTTSGRVYTM 542

Query: 260 GRGF-----NSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G        +  +D   P  +   ++ S   + A G  HV VLT   EV   G   +G L
Sbjct: 543 GSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQL 602



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 8/186 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L PQ +      S   +ACG    +ALT+      G+V+
Sbjct: 486 KLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTT-----SGRVY 540

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G    GQLG   + D   P  V     + + +  ++ G  H   ++    ++T G GT
Sbjct: 541 TMGSAVYGQLG-SPVADGKIPTLVEGKIANSF-VEEVACGSYHVAVLTSKTEVYTWGKGT 598

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGKRGQL 213
            GQLGHGD    ++P  V    +K V  + CG+  +  + L   +    +   SG   Q 
Sbjct: 599 NGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSICSGCHNQF 658

Query: 214 GVSKDR 219
           G  + R
Sbjct: 659 GFRRKR 664



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 137/360 (38%), Gaps = 90/360 (25%)

Query: 91  GKVFSWGRG-SSGQLGHG---------EMVDALYPKPV---TFFDGHRYTITHISAGWNH 137
           G VF WG G   G +G G           +DAL PK +      D H      I+ G  H
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVH-----SIACGGKH 303

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           +  V+  G +F+ G+    +LGHG     S P  + +    N+  +ACG  HS  +    
Sbjct: 304 AVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVT--- 360

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHL 256
           L   +Y +G G      +      S  +P+   G +  + +  ++     +A +++ G L
Sbjct: 361 LSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQL 420

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           +T+                                    GDG    LG   H  +S P  
Sbjct: 421 FTF------------------------------------GDGTFGALGHGDHSSMSIPRE 444

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
           V + R             G + +++A G  H+A V      V L I S +     F  + 
Sbjct: 445 VEALR-------------GQRTMRVACGVWHTAAV------VELMIASSS-----FESSG 480

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 434
            + +  + TWG G+ G+LG G+   ++ P+ V   + + F       +V CG   + A++
Sbjct: 481 SSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESF------CQVACGHNLSVALT 534


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 170/351 (48%), Gaps = 32/351 (9%)

Query: 40  GAGTDGQLGTGRLHDELSPQ--LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           G G+ G+LG G  ++   P+  L +   +  +S       H LALT+      G+V+SWG
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTT-----GEVYSWG 507

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG       PK V      +  +  +SAG+ HS  V++ G L+T GDG FG+
Sbjct: 508 DGDYGKLGHGTHSTQKIPKLVKGPLVGK-VVKCVSAGYRHSAAVTEDGELYTWGDGEFGR 566

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LGH    S + P KV S   ++V  +ACG  H+L + +D  G  ++ FG G+ G+LG   
Sbjct: 567 LGHDYTSSKNFPTKVQSI--ESVGLVACGGSHTLAVSQD--GKTIWSFGGGENGKLG-HG 621

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSDVNCPQ 273
           D  R +  P+V   L+ + I  ++     S A+++ G LY WG     G  S        
Sbjct: 622 DTNRQLK-PKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYTALRP 680

Query: 274 SLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALEK 329
            L   L   +    A G +HV+ LT + EV   G +  G        S  TRP     ++
Sbjct: 681 RLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRP-----KR 735

Query: 330 VSNLDGVKVIQIAAGAEHS----AVVTGKFHWVRLFIISYTPFFPPFFINV 376
           V  LDGV V Q++AG  HS    A+ T ++  V L ++    +  PF +++
Sbjct: 736 VIGLDGVSVHQVSAGTSHSVAWTALPTDRYEMV-LVMLPVIAWPRPFCVDL 785



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 26/273 (9%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V+ WG   + QL  G       PK    F         + AG   +  +   G +  C
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFT----DCQQVEAGQFCTFLIYSDGTVGAC 452

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGS 207
           G G++G+LG GD  + S P K   F  K V +I+       HSL L       +VY +G 
Sbjct: 453 GKGSYGRLGLGDSNNCSVP-KKPLFDKKYVKKISSSKGSDGHSLALTTT---GEVYSWGD 508

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR----- 261
           G  G+LG      + +  P++  G    ++V   + G R SAA++ +G LYTWG      
Sbjct: 509 GDYGKLGHGTHSTQKI--PKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGR 566

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL-MLGGSHHGMLSDPERVSS 319
            G + TS  N P  + S  S    A G +H L ++ DG+ +   GG  +G L   +    
Sbjct: 567 LGHDYTSSKNFPTKVQSIESVGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQ 626

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +P     + +  L+G+ + ++A G++ S  VT
Sbjct: 627 LKP-----KVIEALNGLYIRKVACGSQSSLAVT 654



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 114/299 (38%), Gaps = 50/299 (16%)

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G ++  G     QL  G     ++P   + F +    Q+  G   + ++  D     V  
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTD--CQQVEAGQFCTFLIYSD---GTVGA 451

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
            G G  G+LG+      SV    +    +  +I     +   S AL+  G +Y+WG G  
Sbjct: 452 CGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511

Query: 263 ----FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                 + S    P+ +   L        + G+ H   +T DGE+   G    G L    
Sbjct: 512 GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDY 571

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
             S   P      KV +++ V ++  A G  H+  V+                       
Sbjct: 572 TSSKNFP-----TKVQSIESVGLV--ACGGSHTLAVS----------------------- 601

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
              + + I ++G GE+G+LG G+T  Q+ PKV+   +    R    +V CGS  + A++
Sbjct: 602 --QDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIR----KVACGSQSSLAVT 654


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 194/424 (45%), Gaps = 69/424 (16%)

Query: 35  KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VWS     DG + +  + +D L+P+ L  + +  V  +ACG  HV  +T       G+V
Sbjct: 232 EVWSDAVFPDGSMSSVPIKNDVLTPKPLESNVVLDVQQIACGVRHVALVTR-----QGEV 286

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG  S G+LGHG   D   P+ V F       +  ++ G  H+  V+ SG L+T GDG
Sbjct: 287 FTWGEESGGRLGHGFETDFSCPRLVEFL--AVTNVDFVACGEYHTCAVTTSGDLYTWGDG 344

Query: 154 T--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           T   G LG G   SH  P +VS  +    V  IACG  HS +   +    +++ FG G  
Sbjct: 345 TRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSN---GKLFTFGDGAF 401

Query: 211 GQLGVSKDRIRSVSLP---QVTIGLHDIEIV-------GISANGDRSAALSAEGHLYTWG 260
           G LG   DR  S+S P   Q+  GL  I++         I     +S A  +   L+TWG
Sbjct: 402 GVLG-HGDR-ESLSFPKEVQLLSGLKTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWG 459

Query: 261 RGFNS-----TSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G  +     + D     +  SSL   +F Q A G    + LT  G V  +GG+ HG L 
Sbjct: 460 DGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLG 519

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           +P   +S   +   ++   +L G  V +++ GA H AV+T +                  
Sbjct: 520 NP---ASDGKMPTLVQ--DSLVGEFVEEVSCGAHHVAVLTSRSE---------------- 558

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                     + TWG G +G+LG G+T D+  P +V   +  ++R  +  + CGS FT +
Sbjct: 559 ----------LYTWGKGANGRLGHGDTEDRRTPTLV---EALKDRHVK-NISCGSNFTTS 604

Query: 433 ISRH 436
           I  H
Sbjct: 605 ICIH 608



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 22/193 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   +ACG    +ALT+      G VF
Sbjct: 454 KLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTT-----SGHVF 508

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G  + GQLG+    G+M   +    V  F      +  +S G +H   ++    L+T 
Sbjct: 509 TMGGTAHGQLGNPASDGKMPTLVQDSLVGEF------VEEVSCGAHHVAVLTSRSELYTW 562

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---- 206
           G G  G+LGHGD     +P  V +  +++V  I+CG   +  +   C+   V G      
Sbjct: 563 GKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSI---CIHKWVSGADQSVC 619

Query: 207 SGKRGQLGVSKDR 219
           SG R   G ++ R
Sbjct: 620 SGCRQAFGFTRKR 632



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 137/356 (38%), Gaps = 90/356 (25%)

Query: 91  GKVFSWGRG-SSGQLGHGEMV------DALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           G V+ WG   S      G M       D L PKP+         +  I+ G  H   V+ 
Sbjct: 225 GDVYLWGEVWSDAVFPDGSMSSVPIKNDVLTPKPLE--SNVVLDVQQIACGVRHVALVTR 282

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
            G +FT G+ + G+LGHG     S P  V      NV  +ACG  H+  +        +Y
Sbjct: 283 QGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAV---TTSGDLY 339

Query: 204 GFGSGKR--GQLGVSKDRIRSVS--LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYT 258
            +G G R  G LG   D    VS  +P+   G L  +++  I+     SA  ++ G L+T
Sbjct: 340 TWGDGTRNAGLLGQGTD----VSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKLFT 395

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           +                                    GDG   +LG   HG     +R S
Sbjct: 396 F------------------------------------GDGAFGVLG---HG-----DRES 411

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            + P  V L     L G+K I++A G  H+A +        + ++S +            
Sbjct: 412 LSFPKEVQL-----LSGLKTIKVACGVWHTAAI--------VEVMSQS--------GANV 450

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +R + TWG G+  +LG G+    + P  V+   ++       ++ CG   T A++
Sbjct: 451 SSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFH----QIACGQTLTVALT 502


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 181/407 (44%), Gaps = 74/407 (18%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G+ FSWG  S G+LGHG   +  
Sbjct: 294 DSLLPKALESTIVLDVQYIACGGQHAVLVTK-----QGESFSWGEESEGRLGHGVDSNVQ 348

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
           +PK +         I  ++ G  HS  V+ SG L+T G G FG LGHG+  SH  P +V 
Sbjct: 349 HPKLIDALST--TNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRV- 405

Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           +F+ + +H   IACG  H+ V+       Q++ FG G  G LG   DR +SV +P+    
Sbjct: 406 NFLMEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-KSVFIPREVDS 460

Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST---SDVNCPQSLP 276
           L  +  V  +     +AA+             + G L+TWG G  S     D   P+ +P
Sbjct: 461 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE-PKLVP 519

Query: 277 SSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           + ++      F Q A G +  + LT  G V  +G   +G L +P       P  V     
Sbjct: 520 TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPTRVE---- 574

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L    V +IA GA H AV+T +                            + TWG G 
Sbjct: 575 GKLHKSFVEEIACGAYHVAVLTSRTE--------------------------VYTWGKGS 608

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V        +D Q++ + CGS FT A+  H
Sbjct: 609 NGRLGHGDADDRNSPTLVE-----SLKDKQVKSIACGSNFTAAVCLH 650



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 159/333 (47%), Gaps = 32/333 (9%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +SWG  ++G+LG G   +   P+L++  S +++ ++ACG  H  A+T     + G +++W
Sbjct: 329 FSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVT-----LSGDLYTW 383

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G+G  G LGHG  V    PK V F  +G    ++ I+ G  H+  V+ +G LFT GDGTF
Sbjct: 384 GKGDFGILGHGNEVSHWVPKRVNFLMEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 441

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
           G LGHGD +S   P +V S       + ACG+ H+  +++  +G+         +++ +G
Sbjct: 442 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 501

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
            G + +LG      + V  P     L +     ++     + AL+  GH+YT     +G+
Sbjct: 502 DGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 559

Query: 262 GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             N  +D   P  +   L  S   + A G  HV VLT   EV   G   +G L   +   
Sbjct: 560 LGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADD 619

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              P       V +L   +V  IA G+  +A V
Sbjct: 620 RNSPT-----LVESLKDKQVKSIACGSNFTAAV 647



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G    +L P  +      +   +ACG +  +ALT+      G V+
Sbjct: 496 KLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 550

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+    D   P   T  +G  H+  +  I+ G  H   ++    ++T G 
Sbjct: 551 TMGSPVYGQLGNPH-ADGKVP---TRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 606

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           G+ G+LGHGD    +SP  V S  +K V  IACG
Sbjct: 607 GSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 640


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 175/414 (42%), Gaps = 99/414 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           + +SWG    G+LG G   D   P+L+      +V ++ACG  H  A+TS      G ++
Sbjct: 328 EAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTS-----SGDLY 382

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  SSG LGH        PK V    +G R  ++H+S G  H+  ++ +G LFT G
Sbjct: 383 TWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLR--VSHVSCGPWHTALITSAGRLFTFG 440

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD     +P +V +F      ++ACG+ H+                     
Sbjct: 441 DGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAA------------------- 481

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDV 269
                                    +V + +  D   + +  G L+TWG G         
Sbjct: 482 -------------------------VVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD 516

Query: 270 NCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           N P+  P  +      SFS+ A  +   + LT  G V  +G + +G L  P   +   P+
Sbjct: 517 NKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCP-LANGMSPI 575

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            V    V +     V +I+ G+ H AV+T +                            +
Sbjct: 576 CVEDYLVDST----VEEISCGSHHVAVLTSRTE--------------------------V 605

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            TWG GE+GQLG G+  ++  P +V++      RD Q++ + CGS F+ AI  H
Sbjct: 606 YTWGKGENGQLGHGDCENKCTPTLVDIL-----RDKQVKRIVCGSNFSAAICVH 654



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 78/332 (23%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +DA  PK  +        + +IS G  H+  V+  G  F+ G+   G+LGHG     
Sbjct: 291 GTRIDANTPK--SLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV 348

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S P  + +F   NV  IACG  HS  +        +Y +G G +    +      S  +P
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTS---SGDLYTWGDGAKSSGLLGHRSEASHWIP 405

Query: 227 QVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
           +   GL + + +  +S     +A +++ G L+T+G G                       
Sbjct: 406 KKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDG----------------------- 442

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
                             G   HG           R   +   +V   +G+K +++A G 
Sbjct: 443 ----------------TFGALGHG----------DRSGCITPREVETFNGLKTLKVACGV 476

Query: 346 EHSAVVTGKFHWVRLFI-ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH 404
            H+A V      V L   +   P   P        +  + TWG G+ G+LG G+   ++ 
Sbjct: 477 WHTAAV------VELMSGLDSRPSDAP--------SGTLFTWGDGDKGKLGHGDNKPRLA 522

Query: 405 PKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 434
           P+ +   +   F       EV C    T A++
Sbjct: 523 PQCITALVDKSFS------EVACSYAMTVALT 548


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 181/417 (43%), Gaps = 55/417 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ +G  + G+LG G + +   P  +      +V+ +A G  H+  LT       G V +
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTR-----NGDVLT 95

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA--GWNHSGFVSDSGCLFTCGDG 153
            G   SGQLGHG       PK +      R  ITHIS+  G  +   +S  G L+TCG  
Sbjct: 96  VGFNGSGQLGHGNNKSISTPKKIESLKNIR--ITHISSANGCENLAIISQDGKLYTCGYN 153

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC--LGNQ---VYGFGSG 208
            +GQLGHG   + S+P  V +  +  V  ++C   HSL++ +D     NQ   VY  G  
Sbjct: 154 NYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRN 213

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
             GQLG  ++       P++   L+  +++  +     S  ++  G +++ G       G
Sbjct: 214 DNGQLG--QEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLG 271

Query: 263 FNSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
            N T   N P   +SL +     QAA G+ H LV    GE+   G +  G L   ++ + 
Sbjct: 272 HNDTKSRNQPVLIESLKNKF-IVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQA 330

Query: 317 VSSTRPLSVALEKVSNLD--GVKVIQIAAGAEHS-----------AVVTGKFHWVRLFII 363
           +   + +   L  VSN+   G    Q+ +G EH+           A++ G      L   
Sbjct: 331 LIQPKQIQEFL-TVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQ 389

Query: 364 SYTPFFPPFFINV------------IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                +    +N+            + E+  + T+G G HGQLG GNT DQ  PK V
Sbjct: 390 QPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQV 446



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 152/335 (45%), Gaps = 31/335 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK-- 92
           K+++ G    GQLG G   +  +P L+     + V+ ++C   H L +T        +  
Sbjct: 146 KLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQT 205

Query: 93  -VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            V+S GR  +GQLG       + PK +   +  +  +   + G +HS FV+  G +F+CG
Sbjct: 206 TVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQ--VIQTACGLHHSVFVTVHGEVFSCG 263

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
               GQLGH D +S + PV + S  NK + Q ACG  H+LV  +D    ++Y FG   +G
Sbjct: 264 FNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLV-RRDT--GEIYAFGRNDKG 320

Query: 212 QLGVSKD-----------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           QLG+  +              +VS  Q + G  +    G   N   S +L   G +    
Sbjct: 321 QLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIM--- 377

Query: 261 RGFNSTSDVNCPQS----LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           +G   ++++N  Q     L   ++ S+ A G  H + L   G++   G  +HG L     
Sbjct: 378 QGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNT 437

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
                P     ++V++L   KVI IA G  H+ V+
Sbjct: 438 EDQKLP-----KQVASLHDKKVIGIAGGFYHTIVL 467



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 44/319 (13%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           Q   V+S G   +GQLG      E++P+++   +   V   ACG  H + +T     + G
Sbjct: 203 QQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVT-----VHG 257

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +VFS G   +GQLGH +       +PV         I   + G+ H+    D+G ++  G
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSR--NQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFG 315

Query: 152 DGTFGQLG-HGDYRSHSSPVKVSSFVNK--------NVHQIACGMRHSLVLLKDCLGNQV 202
               GQLG   + ++   P ++  F+          N +Q+  G  H          NQ 
Sbjct: 316 RNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEH----------NQP 365

Query: 203 YGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                G+ G +  G+++    +   PQV      + I  I+     S AL   G L+T+G
Sbjct: 366 SSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFG 425

Query: 261 RGFN------STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL---MLGGSHHG 309
           RG +      +T D   P+ + S         A G+ H +VL    +V     L      
Sbjct: 426 RGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKVKGISQLSTDMKK 485

Query: 310 MLSDPERVSST-----RPL 323
           ++++P R   T     RPL
Sbjct: 486 IINEPSRADVTFIVESRPL 504


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
           niloticus]
          Length = 4833

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 20/263 (7%)

Query: 56  LSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           L+P L+++ S   +  LA    G H LAL+S      G+VFSWG G  G+LGHG+     
Sbjct: 473 LAPMLIHVLSSRKIVKLAAHPDGQHYLALSS-----NGEVFSWGCGDGGRLGHGDTTYLE 527

Query: 114 YPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
            PK +  F+G +    + H++ G  +S  ++  G L+T G G +G+LGHG     ++P+ 
Sbjct: 528 EPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMV 587

Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           V++F    V  +ACG   +  L     G QV+ +G G  G+LG  +        P++   
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLVEK 644

Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSFSQ 283
           L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L S        
Sbjct: 645 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD 704

Query: 284 AALGWNHVLVLTGDGEVLMLGGS 306
            A+G  H L LT DGEVL  G +
Sbjct: 705 VAVGSTHCLALTDDGEVLSWGSN 727



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 158/332 (47%), Gaps = 32/332 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPSSVIG 90
            K+++ G  T+G+LG G L     P    +++LS+  +    +  GG H +ALT     + 
Sbjct: 3009 KIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALT-----VD 3062

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L++ 
Sbjct: 3063 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 3120

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R +  L    L ++  V+ +G G
Sbjct: 3121 GLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTL---ALTDEGFVFSWGDG 3177

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3178 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3235

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3236 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3295

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +P       V  L+G K+ ++A G+ HS   T
Sbjct: 3296 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3322



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G++F
Sbjct: 4058 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 4112

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4113 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4172

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4173 YGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4229

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4230 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4273



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 4046 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 4098

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG LFT G G +G+LGHGD      P  V +     V  +ACG     +L 
Sbjct: 4099 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 4158

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4159 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTK 4213

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4214 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4273

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4274 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4312



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 20/252 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P+++       +   V  +ACG  +  A+T+      
Sbjct: 506 EVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITA-----D 560

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  VT F G +       +G   +  V+++G +++ 
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSW 620

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  V    + ++ ++ CG + S+ L KD    QVY +G G  
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 677

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
            +LG   D    V  P++   L   ++V ++       AL+ +G + +WG       F++
Sbjct: 678 QRLGHGTD--EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDT 735

Query: 266 T-SDVNCPQSLP 276
             S+   P++LP
Sbjct: 736 LFSNKKQPKALP 747



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 176/437 (40%), Gaps = 55/437 (12%)

Query: 7    EETEKGKSALINNAKPKIEEEEEEQQV-VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
            EE +  K+A  + A+ K    E    +  KV+ WG     QLG  +      P      S
Sbjct: 2928 EEEDDEKTAAGSLARKKPSGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 2987

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGH 124
              +V  +A G   + A+T     + GK+++ G  ++G+LG G     +  P+ +T    +
Sbjct: 2988 ALNVVQVAGGSKSLFAVT-----VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNY 3042

Query: 125  RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
                  + +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K +  IA
Sbjct: 3043 VIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3102

Query: 185  CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISAN 243
            CG  HS  +       ++Y +G G+ G+LG   +  +    L +V +G H +  V   + 
Sbjct: 3103 CGSSHSAAITS---SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLG-HRVIQVACGSR 3158

Query: 244  GDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
              ++ AL+ EG +++WG G         +   N PQ++   +     Q   G    L LT
Sbjct: 3159 DAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3218

Query: 296  GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
              G V   G   +  L     V   +P     + V  L G K++ +A GA H   VT   
Sbjct: 3219 KSGVVWTWGKGDYFRLGHGTDVHVRKP-----QMVEGLRGKKIVHVAVGALHCLAVT--- 3270

Query: 356  HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                                   +   +  WG  +HGQ G G T     P +V  G E Q
Sbjct: 3271 -----------------------DTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ 3306

Query: 416  NRDTQLEVFCGSGFTYA 432
                   V CGS  + A
Sbjct: 3307 K---ITRVACGSSHSVA 3320



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4165 VWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4219

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4220 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4277

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4278 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4313



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   +++  +  +    L  ++++G    G+++  A++A+G LY  
Sbjct: 3953 IYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4008

Query: 260  G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G       G   T  V+ P  L S   +   + A+  G  H L L+ +GEV   G +  G
Sbjct: 4009 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4068

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R    RP       + +L GV+V+ IAAG  HSA +T                 
Sbjct: 4069 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITA---------------- 4107

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                      +  + TWG G +G+LG G++ DQ+ PK+V   D  Q     ++V CGSG
Sbjct: 4108 ----------SGELFTWGKGRYGRLGHGDSEDQLKPKLV---DALQGHRV-IDVACGSG 4152



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 156/393 (39%), Gaps = 76/393 (19%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYP---------KPVTFFDGHRYTITHISAGWNHSGFV 141
            G ++ WG    GQLG  E      P         +PV    G +               V
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFA-----------V 3999

Query: 142  SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLG 199
            +  G L+  G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +   
Sbjct: 4000 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE--- 4056

Query: 200  NQVYGFGSGKRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
             +VY +G  + G+LG      RS    P+V   L  +E+V I+A G  SA ++A G L+T
Sbjct: 4057 GEVYSWGEAEDGKLGHGN---RSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFT 4113

Query: 259  WGRGF-----NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHH 308
            WG+G      +  S+      L  +L   +        G    L LT D  V   G   +
Sbjct: 4114 WGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDY 4173

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRL 360
            G L          P+     K+ +L G+ V+++  G++ S  +T        GK  + RL
Sbjct: 4174 GKLGRGGSDGCKIPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 4228

Query: 361  FIISYTPFFPPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQ 402
               S      P  +       VIA            E+  + TWG  + GQLG G T   
Sbjct: 4229 GHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI 4288

Query: 403  IHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 434
              P++V  L  +  NR     V CGS  T A S
Sbjct: 4289 QRPRLVAALQGKKINR-----VACGSAHTLAWS 4316



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 66/297 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G LG   Y + + P++  +  +  V QI C  +  L+L             SG      
Sbjct: 419 WGLLGWKLYANVNGPIQCKALSSLGVTQIVCSEKGFLIL-----------SSSG-----A 462

Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFNS 265
           V     +S +L P +   L   +IV ++A  +G    ALS+ G +++WG       G   
Sbjct: 463 VYSQNYKSTTLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD 522

Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           T+ +  P+ +  + +  QA       A G  +   +T DGE+   G  ++G L       
Sbjct: 523 TTYLEEPKMI-GTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSED 581

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            T P+ V   K     G+KV+ +A G+  +  +                         + 
Sbjct: 582 QTTPMVVTAFK-----GLKVVDVACGSGDAQTL------------------------AVT 612

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           EN  + +WG G++G+LG G +     PK+V   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLV---EKLQDLDI-VKVCCGSQFSVALTK 665



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 45/208 (21%)

Query: 237 IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGW 288
           +V ++     SAA++A+G LYTWGRG        S+ D   P  + +   L     A G 
Sbjct: 544 VVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGS 603

Query: 289 N--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
                L +T +G+V   G   +G L          P  V  EK+ +LD   ++++  G++
Sbjct: 604 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQDLD---IVKVCCGSQ 658

Query: 347 HSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
            S  +T                          ++  + TWG G++ +LG G      +PK
Sbjct: 659 FSVALT--------------------------KDGQVYTWGKGDNQRLGHGTDEHVRYPK 692

Query: 407 VVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           ++   D  Q +   ++V  GS    A++
Sbjct: 693 LL---DSLQGKKV-VDVAVGSTHCLALT 716



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4268 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKL 4326


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 153/325 (47%), Gaps = 27/325 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K+++ G GT+G+LG G  ++   P+L+   S   +  +A   GG H LALT       GK
Sbjct: 3004 KLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQ-----DGK 3058

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ +      R  I  I+ G  HS  ++ +G L+T G 
Sbjct: 3059 VFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKR--IRDIACGSGHSAAIASNGELYTWGL 3116

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LGHGD  +   P  V +   + V Q+ACG R +  +     G  VY +G G  G+
Sbjct: 3117 GEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGC-VYTWGDGDFGK 3175

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            LG  +        P +   L+ + +V +      S AL+  G ++TWG+      G  + 
Sbjct: 3176 LG--RGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3233

Query: 267  SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
              V  P +L   L        A+G  H L +T  G+V   G + HG   +   + + +P 
Sbjct: 3234 HHVRKP-TLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKP- 3291

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHS 348
                  V  LD  ++ +++ G+ HS
Sbjct: 3292 ----SLVHELDDTRMNRVSCGSSHS 3312



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 147/326 (45%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV+S G G  G+LG G     + P LL       +  +A   GG H LAL+S      G 
Sbjct: 3985 KVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GH 4039

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +   Y +P    D     I  I+ G +HS  ++ +G L+T G 
Sbjct: 4040 VYSWGEGDDGKLGHGNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGK 4097

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD      P  V +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4154

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
            G+LG  +       +P     L  + ++ +      S AL+  G +YTWG+G      + 
Sbjct: 4155 GKLG--RGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4212

Query: 266  TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D V  P+ + +         A G  H +  +  GEV   G +  G L D    +  RP
Sbjct: 4213 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRP 4272

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4273 -----RLVHALQGKKITRVACGSAHT 4293



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG G  G+LG G    HDE  P+L+      ++  +ACG  +  AL++      G++
Sbjct: 530 VYSWGNGDGGRLGHGDNISHDE--PKLIETLLEKNIIFIACGSTYSAALSA-----SGEL 582

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG+ G+LGHG   D   P  VT   GH        +G + +  V+ SG +F+ GDG
Sbjct: 583 YTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 642

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G   +L
Sbjct: 643 DYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTAR---GEVYTWGKGDAYRL 699

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G   +    V  P++   L D +I  +S  G    AL+ +  +Y WGR
Sbjct: 700 GHGNE--EHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGR 745



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 129/268 (48%), Gaps = 23/268 (8%)

Query: 58  PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
           PQ ++  S   V+M+A    G H LALT       G V+SWG G  G+LGHG+ +    P
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLALTQ-----DGCVYSWGNGDGGRLGHGDNISHDEP 552

Query: 116 KPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS 174
           K + T  + +   I  I+ G  +S  +S SG L+T G G +G+LGHG     + P  V++
Sbjct: 553 KLIETLLEKN---IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTT 609

Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
                V  +ACG   S  L     G  V+ +G G  G+LG  +        P++   L D
Sbjct: 610 LKGHMVVHVACGSGDSQTLCVTASG-IVFSWGDGDYGKLG--RGGSDGSKTPKIVDKLLD 666

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAAL 286
           I +V +   G  SAAL+A G +YTWG+      G  +   V  P+ + S         ++
Sbjct: 667 INVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSV 726

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
           G  H+L LT D  V   G + +G + DP
Sbjct: 727 GGTHILALTEDQFVYGWGRNDYGQI-DP 753



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 171/416 (41%), Gaps = 65/416 (15%)

Query: 32   QVVKVWSWGAGTDGQLGT---GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
            Q   V+ WG     QLG     ++   +  ++L  S L  + +   GG+  L + S    
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVL--SKLKPIHI--AGGSKTLFIVSQE-- 3002

Query: 89   IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
              GK+++ G G++G+LG G+  +   PK + F   +      + +G  H+  ++  G +F
Sbjct: 3003 --GKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVF 3060

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + G+G  G+LGHG+  +   P  + S  +K +  IACG  HS  +  +    ++Y +G G
Sbjct: 3061 SWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASN---GELYTWGLG 3117

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG--- 262
            + G+LG      +    P++   L    +V + A G R A   +L+A+G +YTWG G   
Sbjct: 3118 EYGRLGHGDTATQMK--PKLVQALSGQRVVQV-ACGSRDAQTMSLTADGCVYTWGDGDFG 3174

Query: 263  -FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                     C   L     + L   Q   G    L LT  GEV   G   +  L      
Sbjct: 3175 KLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3234

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P       V  L G K++ +A GA H   VT                         
Sbjct: 3235 HVRKP-----TLVEGLRGKKIVHVAVGALHCLAVT------------------------- 3264

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
             +   +  WG  +HGQ G G T     P +V+ L D   NR     V CGS  + A
Sbjct: 3265 -DTGQVYAWGDNDHGQQGNGTTIVNRKPSLVHELDDTRMNR-----VSCGSSHSIA 3314



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 172/412 (41%), Gaps = 61/412 (14%)

Query: 36   VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            ++ WG    GQLG       +L     +LS+L  +  LA G   + A+T+      GKV+
Sbjct: 3934 IYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQ-LAGGEQTLFAVTA-----DGKVY 3987

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            S G G++G+LG G     + P  +            +++G  H   +S  G +++ G+G 
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
             G+LGHG+  S+  P  V   +   +  IACG  HS  +        +Y +G G+ G+LG
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITS---AGWLYTWGKGRYGRLG 4104

Query: 215  --VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
               S D++R    P+V   L D +++ ++  +GD ++  ++ + ++++WG        RG
Sbjct: 4105 HGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4160

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +    V       + L   +   G    + LT  G V   G   +  L         RP
Sbjct: 4161 GSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRP 4220

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  KV+ L G K+I IA G+ H    + K                            
Sbjct: 4221 -----RKVAALQGKKIISIATGSLHCVACSDKGE-------------------------- 4249

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            + TWG  + GQLG G T     P++V+     Q +     V CGS  T A S
Sbjct: 4250 VFTWGDNDEGQLGDGTTSALQRPRLVH---ALQGKKIT-RVACGSAHTLAWS 4297



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 18/194 (9%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  L C    +L L+     + G V+    GS  Q  + + + +   KPVT    H    
Sbjct: 467 IKHLCCTERALLILS-----LSGNVYIMYYGSETQ--YPQRMHSFSDKPVTMIASH---- 515

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
              S G ++     D GC+++ G+G  G+LGHGD  SH  P  + + + KN+  IACG  
Sbjct: 516 ---SDGKHYLALTQD-GCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGST 571

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           +S  L       ++Y +G G  G+LG   +   +V     T+  H +  V   +   ++ 
Sbjct: 572 YSAAL---SASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTL 628

Query: 249 ALSAEGHLYTWGRG 262
            ++A G +++WG G
Sbjct: 629 CVTASGIVFSWGDG 642



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 106/258 (41%), Gaps = 60/258 (23%)

Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSGKRGQLG----VSKDRIR 221
           P ++ SF +K V  IA     +H L L +D C    VY +G+G  G+LG    +S D   
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLALTQDGC----VYSWGNGDGGRLGHGDNISHDE-- 551

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
               P++   L +  I+ I+     SAALSA G LYTWGRG        S  DV  P +L
Sbjct: 552 ----PKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVP-TL 606

Query: 276 PSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
            ++L            G +  L +T  G V   G   +G L       S  P     + V
Sbjct: 607 VTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTP-----KIV 661

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L  + V+++  G + SA +T +                            + TWG G+
Sbjct: 662 DKLLDINVVRVFCGGQFSAALTARGE--------------------------VYTWGKGD 695

Query: 391 HGQLGLGNTCDQIHPKVV 408
             +LG GN     +PK++
Sbjct: 696 AYRLGHGNEEHVRYPKLI 713



 Score = 41.2 bits (95), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 58/278 (20%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           SSP    +     +  + C  R  L+L    L   VY    G   Q      R+ S S  
Sbjct: 454 SSPFYCDAIAELGIKHLCCTERALLIL---SLSGNVYIMYYGSETQY---PQRMHSFSDK 507

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--------NSTSDVNCPQSLPSS 278
            VT+       +   ++G    AL+ +G +Y+WG G         N + D   P+ + + 
Sbjct: 508 PVTM-------IASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDE--PKLIETL 558

Query: 279 L--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
           L  +    A G  +   L+  GE+   G  ++G L        T P       V+ L G 
Sbjct: 559 LEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVP-----TLVTTLKGH 613

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
            V+ +A G+  S  +                         +  +  + +WG G++G+LG 
Sbjct: 614 MVVHVACGSGDSQTL------------------------CVTASGIVFSWGDGDYGKLGR 649

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           G +     PK+V   D+  + +  + VFCG  F+ A++
Sbjct: 650 GGSDGSKTPKIV---DKLLDINV-VRVFCGGQFSAALT 683



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G   +LG G       P+L+       +  L+ GG H+LALT    V G    
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYG---- 742

Query: 95  SWGRGSSGQL 104
            WGR   GQ+
Sbjct: 743 -WGRNDYGQI 751


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 162/340 (47%), Gaps = 40/340 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG G   D   P+L++  S  ++ ++ACG  H  A+T     + G ++
Sbjct: 328 EVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVT-----LSGDLY 382

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  SG LGHG+ V    PK VT    G    I+ IS G  H+  V+ +G LFT G
Sbjct: 383 TWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG--LHISSISCGPWHTALVTSAGKLFTFG 440

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD  S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 441 DGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKL 500

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT    
Sbjct: 501 FTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSP 558

Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML--- 311
            +G+  N  +D   P  +   LS S   + A G  HV VLT   EV   G   +G L   
Sbjct: 559 VYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHG 618

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           S  +R + T         V  L   +V  IA G   +A +
Sbjct: 619 STDDRNTPTL--------VEALKDKQVKSIACGTNFTAAI 650



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 150/379 (39%), Gaps = 71/379 (18%)

Query: 110 VDALYPKP---VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           +D+L PK    V   D     + +I+ G  H+  V+  G +F+ G+   G+LGHG     
Sbjct: 294 IDSLLPKALESVVVLD-----VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA 348

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
             P  + +  N N+  +ACG  H+  +    L   +Y +G G    G LG  KD    V 
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAV---TLSGDLYTWGDGTYNSGLLGHGKDVSHWVP 405

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS- 277
             +VT  L  + I  IS     +A +++ G L+T+G       G      ++ P+ + S 
Sbjct: 406 -KRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL 464

Query: 278 -SLSFSQAALGWNH----VLVLTG--------DGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             L   +AA G  H    V V+ G         G++   G    G L   ++ +   P  
Sbjct: 465 KGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTC 524

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP------------- 371
           VA     N       Q+A G   +  +T   H   +    Y     P             
Sbjct: 525 VAALVEPNF-----CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGK 579

Query: 372 -------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                        + + V+     + TWG G +G+LG G+T D+  P +V        +D
Sbjct: 580 LSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVE-----ALKD 634

Query: 419 TQLE-VFCGSGFTYAISRH 436
            Q++ + CG+ FT AI  H
Sbjct: 635 KQVKSIACGTNFTAAICLH 653


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 164/403 (40%), Gaps = 97/403 (24%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K+++ G GT+G+LG G   +   P+ +   S   +  +A   GG H LALT       GK
Sbjct: 2843 KLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQ-----DGK 2897

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG  +    P+ +      R  I  I+ G  HS  ++ SG L+T G 
Sbjct: 2898 VFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR--IRDIACGSGHSAAITSSGELYTWGL 2955

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  + S P  V S V + V QIACG R   ++ L  D L   VY +G G  
Sbjct: 2956 GEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGL---VYSWGDGDF 3012

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
            G+LG  +        P +   L+ + +V I      S AL+  G ++TWG+G        
Sbjct: 3013 GKLG--RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKG-------- 3062

Query: 271  CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
                                      D   L  G  HH  +  P  V   R         
Sbjct: 3063 --------------------------DYFRLGHGNDHH--VRKPTLVEGLR--------- 3085

Query: 331  SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
                G K+I +A GA H   VT                          +   +  WG  +
Sbjct: 3086 ----GKKIIHVAVGALHCLAVT--------------------------DIGQVYAWGDND 3115

Query: 391  HGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
            HGQ G G T     P +V+ L D   NR     V CGS  + A
Sbjct: 3116 HGQQGNGTTIVNKKPSLVHELDDARVNR-----VSCGSSHSIA 3153



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 148/326 (45%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G G  G+LG G     + P LL       V  +A   GG H LAL+S      G 
Sbjct: 3837 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 3891

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +    PK +    G    I  I+ G +HS  ++ +G L+T G 
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTE--IVDIACGGHHSAAITSAGWLYTWGK 3949

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD     +P  + +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 3950 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4006

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
            G+LG  +       +P     L  + ++ +      S AL+  G +YTWG+G      + 
Sbjct: 4007 GKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4064

Query: 266  TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D V  P+ + +         A G  H +  T  GEV   G +  G L D    +  RP
Sbjct: 4065 TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRP 4124

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4125 -----RLVHALQGKKITRVACGSAHT 4145



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 18/232 (7%)

Query: 36  VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG G  G+LG G +  +DE  P+L+      +++ +ACG  +  AL+S      G++
Sbjct: 523 VYSWGNGECGRLGHGNMTWYDE--PKLIEALVEKNITFIACGSTYSAALSS-----NGEL 575

Query: 94  FSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGF-VSDSGCLFTCG 151
           ++WGRG+ G+LGHG    D + P  VT  +GH         G +     V+ SG +F+ G
Sbjct: 576 YTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWG 635

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG  G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G+  
Sbjct: 636 DGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA---YGEVYTWGKGEDY 692

Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           +LG  ++D +R    P++   L   +I  +        AL+ +  +Y WGR 
Sbjct: 693 KLGHGNEDHVR---YPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRN 741



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 119/257 (46%), Gaps = 21/257 (8%)

Query: 69  VSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
           ++M+A    G H LALT  +SV     +SWG G  G+LGHG M    Y +P         
Sbjct: 502 ITMIASHSDGTHYLALTQDNSV-----YSWGNGECGRLGHGNM--TWYDEPKLIEALVEK 554

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIAC 185
            IT I+ G  +S  +S +G L+T G G +G+LGHG+  +    P  V++     V  +AC
Sbjct: 555 NITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVAC 614

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
           G       L       V+ +G G  G+LG  +        P++   L DI +  +     
Sbjct: 615 GGGRDPQTLCVTASGIVFSWGDGNHGKLG--RGGCDGSKTPKIVDKLLDINVAKVYCGQQ 672

Query: 246 RSAALSAEGHLYTWGRGFN------STSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGD 297
            SAAL+A G +YTWG+G +      +   V  P+   +  +       +G  HVL LT D
Sbjct: 673 FSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTED 732

Query: 298 GEVLMLGGSHHGMLSDP 314
             V   G + HG + DP
Sbjct: 733 QLVYGWGRNDHGQI-DP 748



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
            VWSWG G  G+LG G       P  + + SL+ + ++   CG    +ALT       G +
Sbjct: 3998 VWSWGDGDYGKLGRGGSDGCKIP--MKIESLAGLGVIKVECGSQFSVALTR-----SGAI 4050

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG+G   +LGHG       P+ V    G +  I  I+ G  H    +D G +FT GD 
Sbjct: 4051 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK--IISIATGSLHCVACTDKGEVFTWGDN 4108

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
              GQLG G   +   P  V +   K + ++ACG  H+L
Sbjct: 4109 DEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4146



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 150/386 (38%), Gaps = 62/386 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P         R     ++ G      V+  G ++  
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTADGKVYAT 3841

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S   P  + S  +  V ++A   G +H L L  +     VY +G G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 3898

Query: 209  KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
              G+LG    +S DR      P++   L   EIV I+  G  SAA+++ G LYTWG+   
Sbjct: 3899 DDGKLGHGNRLSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952

Query: 262  ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               G   + D   P+ + +   +    +    G    L +T D  V   G   +G L   
Sbjct: 3953 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4012

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYT 366
                   P+     K+ +L G+ VI++  G++ S  +T        GK  + RL   +  
Sbjct: 4013 GSDGCKIPM-----KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4067

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG G T     P++V
Sbjct: 4068 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4127

Query: 409  NLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +     Q +     V CGS  T A S
Sbjct: 4128 H---ALQGKKIT-RVACGSAHTLAWS 4149



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGG---AHVLALTSPSSVIG 90
           ++++WG G  G+LG G    D + P L+   +   V  +ACGG      L +T+      
Sbjct: 574 ELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTA-----S 628

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G VFSWG G+ G+LG G    +  PK V    D     +  +  G   S  ++  G ++T
Sbjct: 629 GIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLD---INVAKVYCGQQFSAALTAYGEVYT 685

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G G   +LGHG+      P  +     K +  +  G  H L L +D L   VYG+G   
Sbjct: 686 WGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQL---VYGWGRND 742

Query: 210 RGQL 213
            GQ+
Sbjct: 743 HGQI 746



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%)

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
           SP   +  S   +  L C    V+ L+     + G V+    GS  Q  +G        K
Sbjct: 451 SPVYYDTISELGIKQLCCTERAVIILS-----VNGNVYMMYYGSETQRVYG-----FSEK 500

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
           P+T    H       S G ++     D+  +++ G+G  G+LGHG+   +  P  + + V
Sbjct: 501 PITMIASH-------SDGTHYLALTQDNS-VYSWGNGECGRLGHGNMTWYDEPKLIEALV 552

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            KN+  IACG  +S  L  +    ++Y +G G  G+LG   +  + V +P +   L+   
Sbjct: 553 EKNITFIACGSTYSAALSSN---GELYTWGRGNYGKLG-HGNSDKDVMIPTLVTALNGHM 608

Query: 237 IVGISANGDR---SAALSAEGHLYTWGRG 262
           +V ++  G R   +  ++A G +++WG G
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDG 637



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 98/248 (39%), Gaps = 50/248 (20%)

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            VY +G   + QLG  K     + LP  +  L  ++ V I+        +S EG LY  G 
Sbjct: 2792 VYVWGLNDKDQLGGLKGS--KIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2849

Query: 262  GFN------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGML 311
            G N        S+V  P+ +P  S     + A+  G  H L LT DG+V   G    G L
Sbjct: 2850 GTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKL 2909

Query: 312  SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                 +S  +P       + +L   ++  IA G+ HSA +T                   
Sbjct: 2910 GHGNSISLDKP-----RLIESLKSKRIRDIACGSGHSAAITS------------------ 2946

Query: 372  FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQ-----NRDTQLEVF 424
                    +  + TWG GE+G+LG G+T  Q  PK+V   +G         +RD Q    
Sbjct: 2947 --------SGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMAL 2998

Query: 425  CGSGFTYA 432
               G  Y+
Sbjct: 2999 TADGLVYS 3006


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 175/414 (42%), Gaps = 99/414 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           + +SWG    G+LG G   D   P+L+      +V ++ACG  H  A+TS      G ++
Sbjct: 328 EAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTS-----SGDLY 382

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  SSG LGH        PK V    +G R  ++H+S G  H+  ++ +G LFT G
Sbjct: 383 TWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLR--VSHVSCGPWHTALITSAGRLFTFG 440

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD     +P +V +F      ++ACG+ H+                     
Sbjct: 441 DGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAA------------------- 481

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDV 269
                                    +V + +  D   + +  G L+TWG G         
Sbjct: 482 -------------------------VVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD 516

Query: 270 NCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           N P+  P  +      SFS+ A  +   + LT  G V  +G + +G L  P   +   P+
Sbjct: 517 NKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCP-LANGMSPI 575

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            V    V +     V +I+ G+ H AV+T +                            +
Sbjct: 576 CVEDYLVDST----VEEISCGSHHVAVLTSRTE--------------------------V 605

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            TWG GE+GQLG G+  ++  P +V++      RD Q++ + CGS F+ AI  H
Sbjct: 606 YTWGKGENGQLGHGDCENKCTPTLVDIL-----RDKQVKRIVCGSNFSAAICVH 654



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 125/331 (37%), Gaps = 76/331 (22%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +DA  PK  +        + +IS G  H+  V+  G  F+ G+   G+LGHG     
Sbjct: 291 GTRIDANTPK--SLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV 348

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S P  + +F   NV  IACG  HS  +        +Y +G G +    +      S  +P
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTS---SGDLYTWGDGAKSSGLLGHRSEASHWIP 405

Query: 227 QVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
           +   GL + + +  +S     +A +++ G L+T+G G                       
Sbjct: 406 KKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDG----------------------- 442

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
                             G   HG           R   +   +V   +G+K +++A G 
Sbjct: 443 ----------------TFGALGHG----------DRSGCITPREVETFNGLKTLKVACGV 476

Query: 346 EHSAVVTGKFHWVRLFI-ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH 404
            H+A V      V L   +   P   P        +  + TWG G+ G+LG G+   ++ 
Sbjct: 477 WHTAAV------VELMSGLDSRPSDAP--------SGTLFTWGDGDKGKLGHGDNKPRLA 522

Query: 405 PKVVN-LGDEFQNRDTQLEVFCGSGFTYAIS 434
           P+ +  L D+     +  EV C    T A++
Sbjct: 523 PQCITALVDK-----SFSEVACSYAMTVALT 548


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 162/340 (47%), Gaps = 40/340 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG G   D   P+L++  S  ++ ++ACG  H  A+T     + G ++
Sbjct: 328 EVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVT-----LSGDLY 382

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  SG LGHG+ V    PK VT    G    I+ IS G  H+  V+ +G LFT G
Sbjct: 383 TWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG--LHISSISCGPWHTALVTSAGKLFTFG 440

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD  S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 441 DGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKL 500

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT    
Sbjct: 501 FTWGDGDKGRLGHGDKEARLV--PTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSP 558

Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML--- 311
            +G+  N  +D   P  +   LS S   + A G  HV VLT   EV   G   +G L   
Sbjct: 559 VYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHG 618

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           S  +R + T         V  L   +V  IA G   +A +
Sbjct: 619 STDDRNTPTL--------VEALKDKQVKSIACGTNFTAAI 650



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 150/379 (39%), Gaps = 71/379 (18%)

Query: 110 VDALYPKP---VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           +D+L PK    V   D     + +I+ G  H+  V+  G +F+ G+   G+LGHG     
Sbjct: 294 IDSLLPKALESVVVLD-----VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA 348

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
             P  + +  N N+  +ACG  H+  +    L   +Y +G G    G LG  KD    V 
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAV---TLSGDLYTWGDGTYNSGLLGHGKDVSHWVP 405

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS- 277
             +VT  L  + I  IS     +A +++ G L+T+G       G      ++ P+ + S 
Sbjct: 406 -KRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL 464

Query: 278 -SLSFSQAALGWNH----VLVLTG--------DGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             L   +AA G  H    V V+ G         G++   G    G L   ++ +   P  
Sbjct: 465 KGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTC 524

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP------------- 371
           VA     N       Q+A G   +  +T   H   +    Y     P             
Sbjct: 525 VAALVEPNF-----CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGK 579

Query: 372 -------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                        + + V+     + TWG G +G+LG G+T D+  P +V        +D
Sbjct: 580 LSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVE-----ALKD 634

Query: 419 TQLE-VFCGSGFTYAISRH 436
            Q++ + CG+ FT AI  H
Sbjct: 635 KQVKSIACGTNFTAAICLH 653


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 182/407 (44%), Gaps = 74/407 (18%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G+ FSWG  S G+LGHG   +  
Sbjct: 299 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHGVDSNVQ 353

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
           +PK +   +     I  ++ G  HS  V+ SG L+T G G FG LGHG+  SH  P +V 
Sbjct: 354 HPKLIDALNT--TNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRV- 410

Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           +F+ + +H   IACG  H+ V+       Q++ FG G  G LG   DR +SV +P+    
Sbjct: 411 NFLMEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-KSVFIPREVDS 465

Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST---SDVNCPQSLP 276
           L  +  V  +     +AA+             + G L+TWG G  S     D   P+ +P
Sbjct: 466 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE-PKLVP 524

Query: 277 SSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           + ++      F Q A G +  + LT  G V  +G   +G L +P       P  V     
Sbjct: 525 TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPTRVD---- 579

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L    V +IA GA H AV+T +                            + TWG G 
Sbjct: 580 GKLHKSFVEEIACGAYHVAVLTSRTE--------------------------VYTWGKGS 613

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V        +D Q++ + CGS FT A+  H
Sbjct: 614 NGRLGHGDADDRNSPTLVE-----SLKDKQVKSIACGSNFTAAVCLH 655



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 32/333 (9%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +SWG  ++G+LG G   +   P+L++  + +++ ++ACG  H  A+T     + G +++W
Sbjct: 334 FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVT-----LSGDLYTW 388

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G+G  G LGHG  V    PK V F  +G    ++ I+ G  H+  V+ +G LFT GDGTF
Sbjct: 389 GKGDFGILGHGNEVSHWVPKRVNFLMEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 446

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
           G LGHGD +S   P +V S       + ACG+ H+  +++  +G+         +++ +G
Sbjct: 447 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 506

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
            G + +LG      + V  P     L +     ++     + AL+  GH+YT     +G+
Sbjct: 507 DGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 564

Query: 262 GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             N  +D   P  +   L  S   + A G  HV VLT   EV   G   +G L   +   
Sbjct: 565 LGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADD 624

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              P       V +L   +V  IA G+  +A V
Sbjct: 625 RNSPT-----LVESLKDKQVKSIACGSNFTAAV 652



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G    +L P  +      +   +ACG +  +ALT+      G V+
Sbjct: 501 KLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 555

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+    D   P   T  DG  H+  +  I+ G  H   ++    ++T G 
Sbjct: 556 TMGSPVYGQLGNPH-ADGKVP---TRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 611

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           G+ G+LGHGD    +SP  V S  +K V  IACG
Sbjct: 612 GSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 645


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            +V++ G GT+G+LG G  ++   P  L +     V  +A   GG H LALT     + GK
Sbjct: 3127 RVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3181

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ V      +  I  ++ G +HS  +S  G L+T G 
Sbjct: 3182 VFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3239

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD  +   P  V++   + V Q+ACG R   +L L +D     V+ +G G  
Sbjct: 3240 GEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3296

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +        P     L  I ++ I      S AL+  G ++TWG+      G  
Sbjct: 3297 GKLG--RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3354

Query: 265  STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                V  PQ +           A+G  H L +T  G+V   G + HG         + +P
Sbjct: 3355 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKP 3414

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
               AL  V  LD V V ++A G+ HS
Sbjct: 3415 ---AL--VIGLDDVFVNRVACGSSHS 3435



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       P+L+      SV+ +ACG AH  A+T+      G+V 
Sbjct: 4331 EVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITA-----SGQVL 4385

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4386 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4445

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4446 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS---GAVYTWGKGDFHRLG 4502

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+    L   +I+ I+       A S  G +YTWG
Sbjct: 4503 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4546



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 132/304 (43%), Gaps = 27/304 (8%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LALT+      G+V++WG G  G+LGHG  V    PK V     H  ++  I+ G
Sbjct: 4319 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRVSYDRPKLVEHL--HGMSVADIACG 4371

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4372 SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4431

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       LP     L  + ++ +      S AL+ 
Sbjct: 4432 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4486

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4487 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4546

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
             +  G L D    +  RP       VS L G  ++++  G+ H+  ++      RL  + 
Sbjct: 4547 DNDEGQLGDGTVTAIQRP-----RLVSALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4601

Query: 365  YTPF 368
              P 
Sbjct: 4602 NPPL 4605



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 111/245 (45%), Gaps = 17/245 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +SWGAG D +LG G  H    P  +       V  + CG  +   +T      GG + +
Sbjct: 652 AYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVIT-----CGGNLLT 706

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+  +LGHG   D   P  V     H      + +G  HS  ++  G +F  GDG +
Sbjct: 707 WGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDY 766

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+G+      P+ V S     V +I  G ++S+ L  +    QVY +G        +
Sbjct: 767 GKLGNGNCNGSLQPILVESL--PRVQRIFAGSQYSVALSSE---GQVYTWGKATCLGHQL 821

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
            +  ++  S+P++   L    IV ++       ALS+ G ++ WGR        +C Q  
Sbjct: 822 VERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRN-------DCQQVC 874

Query: 276 PSSLS 280
           PSS+S
Sbjct: 875 PSSVS 879



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 152/356 (42%), Gaps = 58/356 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLF 148
            G+VF+ G G++G+LG G   +   P  +     H+Y +  ++  +G  H+  ++  G +F
Sbjct: 3126 GRVFACGEGTNGRLGLGVTYNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDGKVF 3183

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + G+G  G+LGHG+  +   P +V +   K +  +ACG  HS  +       ++Y +G G
Sbjct: 3184 SWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGLG 3240

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW------ 259
            + G+LG   +  +    P++   L    +V + A G R A   AL+ +G +++W      
Sbjct: 3241 EYGRLGHGDNATQLK--PKLVAALAGRRVVQV-ACGSRDAQTLALTEDGAVFSWGDGDFG 3297

Query: 260  --GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
              GRG +  SD        S +   Q   G    L LT  GEV   G   +  L      
Sbjct: 3298 KLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3357

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               +P     + +  L G +VI +A GA H   VT                         
Sbjct: 3358 HVRKP-----QPIGGLRGRRVIHVAVGALHCLAVT------------------------- 3387

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
             ++  +  WG  +HGQ G GNT     P  V+ L D F NR     V CGS  + A
Sbjct: 3388 -DSGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDDVFVNR-----VACGSSHSIA 3437



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 9/159 (5%)

Query: 36   VWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VWSWG G  G+LG G     +L  ++ +L+ L  + +  CG    +ALT       G V+
Sbjct: 4438 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV-ECGSQFSVALTK-----SGAVY 4491

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G   +LGHG +     PK V    G +  I  I+ G  H    SDSG ++T GD  
Sbjct: 4492 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKK--IISIATGSLHCVACSDSGEVYTWGDND 4549

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
             GQLG G   +   P  VS+   K++ ++ CG  H+L L
Sbjct: 4550 EGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 165/409 (40%), Gaps = 55/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            ++ WG    GQLG        +P      SL     LA G   + A+T       GK+F+
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4280

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
             G GS G+LG G       P  +            +++G  H   ++  G ++  G+G  
Sbjct: 4281 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4340

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
            G+LGHG+  S+  P  V      +V  IACG  HS  +       QV  +G G+ G+L  
Sbjct: 4341 GKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITAS---GQVLTWGKGRYGRLGH 4397

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
            G S+D++R   L +  +G   I+I   S +  ++  ++ + ++++WG       G   + 
Sbjct: 4398 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4455

Query: 268  DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  + S   L   +   G    + LT  G V   G      L         RP   
Sbjct: 4456 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4512

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +KV+ L G K+I IA         TG  H V                   +++  + T
Sbjct: 4513 --KKVAALQGKKIISIA---------TGSLHCV-----------------ACSDSGEVYT 4544

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            WG  + GQLG G       P++V+     Q +   ++V CGS  T A+S
Sbjct: 4545 WGDNDEGQLGDGTVTAIQRPRLVS---ALQGKHI-VKVTCGSAHTLALS 4589


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 37/340 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P++++  S ++V ++ACG  H  A+T     + G ++
Sbjct: 310 EIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT-----LSGDLY 364

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    P+ V+   +G R  +++IS G  H+  V+ +G LFT G
Sbjct: 365 TWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIR--VSYISCGAWHTAVVTSAGQLFTFG 422

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC------------LG 199
           DG+FG LGHGD+ + + P +V +       ++ACG+ H+   ++                
Sbjct: 423 DGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSS 482

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
            ++Y +G G +G+LG   +  R V  P+    L +  I  ++   D + AL+  G +YT 
Sbjct: 483 RKLYTWGDGDKGRLGHGDNEPRLV--PECVAALMEERICQVACGNDLTVALTTAGRVYTM 540

Query: 259 ----WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
               +G+  ++T++   P  +   ++ S   + A G  HV VLT   EV   G   +G L
Sbjct: 541 GSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +      P  V +     L   +V  +A G++ + V+
Sbjct: 601 GHGDNNHRNTPTIVDV-----LKDKQVKNVACGSKFTVVI 635



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 179/408 (43%), Gaps = 71/408 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G++FSWG  S G+LGHG   D  
Sbjct: 277 DALLPKALESTVVLDVHGIACGGRHAVLVTRQ-----GEIFSWGEESGGRLGHGVEADVS 331

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +PK +    G    +  ++ G  H+  V+ SG L+T GDGT  +G LGHG   SH  P K
Sbjct: 332 HPKIIDTLSGTNVEL--VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----------VSKDRI 220
           VS  +    V  I+CG  H+ V+       Q++ FG G  G LG             + +
Sbjct: 390 VSGQMEGIRVSYISCGAWHTAVVTS---AGQLFTFGDGSFGALGHGDHITSNFPREVETL 446

Query: 221 RSVSLPQVTIGL----HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQS 274
           R +   +V  G+      +E +   ++   SA+ S+   LYTWG G         N P+ 
Sbjct: 447 RGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSR-KLYTWGDGDKGRLGHGDNEPRL 505

Query: 275 LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           +P  ++        Q A G +  + LT  G V  +G + +G L      +   P  V  E
Sbjct: 506 VPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEGE 564

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
             ++     V ++A G+ H AV+T K                            + TWG 
Sbjct: 565 IANSF----VEEVACGSYHVAVLTSK--------------------------NEVYTWGK 594

Query: 389 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G +GQLG G+   +  P +V++  + Q ++    V CGS FT  I  H
Sbjct: 595 GLNGQLGHGDNNHRNTPTIVDVLKDKQVKN----VACGSKFTVVICIH 638



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 134/338 (39%), Gaps = 80/338 (23%)

Query: 103 QLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
           Q      +DAL PK +      D H      I+ G  H+  V+  G +F+ G+ + G+LG
Sbjct: 269 QCSLNSKLDALLPKALESTVVLDVH-----GIACGGRHAVLVTRQGEIFSWGEESGGRLG 323

Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSK 217
           HG     S P  + +    NV  +ACG  H+  +    L   +Y +G G    G LG   
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT---LSGDLYTWGDGTHNYGLLGHGS 380

Query: 218 DRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
           +   S  +PQ   G +  I +  IS     +A +++ G L+T+G G              
Sbjct: 381 E--VSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDG-------------- 424

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
                S  ALG                    HG     + ++S  P      +V  L G+
Sbjct: 425 -----SFGALG--------------------HG-----DHITSNFP-----REVETLRGL 449

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +  ++A G  H+A      + +     S +P            +R + TWG G+ G+LG 
Sbjct: 450 RTTKVACGVWHTAAAVEAINELSDSGTSASP-----------SSRKLYTWGDGDKGRLGH 498

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           G+   ++ P+ V    E    +   +V CG+  T A++
Sbjct: 499 GDNEPRLVPECVAALME----ERICQVACGNDLTVALT 532


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 15  ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC 74
           A+IN     +E+  +++   K++ WG   D QLG      E  P+   +S    ++    
Sbjct: 2   AIINAPNNGLEDNAQQEYSNKLFVWGCSDDWQLGI-----ETGPKNYQISDPVQITPDYW 56

Query: 75  GGA--HVLALTSPSSVIG--GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTIT 129
            G    + A ++ S  I   G VFSWG G  G+LG+ + V    YPK +  F      +T
Sbjct: 57  QGKLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVT 116

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            I+ G +HS   ++ G L+T G G  GQLGHG  ++   P KV  F +  V +IACG  H
Sbjct: 117 KIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSH 176

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           ++ ++    GN VYG+G  + GQLG     +  V+LP+  +  +  E+V I      S A
Sbjct: 177 TMAIIS---GNLVYGWGFNQAGQLGFQD--LSRVNLPKKIMFFNQKEVVQIQCGKKHSIA 231

Query: 250 LSAEGHLYTWG 260
           L+ EG +Y+WG
Sbjct: 232 LTVEGQVYSWG 242



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 13/184 (7%)

Query: 36  VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           V+SWG+G  G+LG  + +  +  P+++   S+ +  V+ +A G  H  A T+      GK
Sbjct: 79  VFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQ-----GK 133

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +++WG+G +GQLGHG   +   PK V  F   R  +  I+ G +H+  +     ++  G 
Sbjct: 134 LYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIR--VLEIACGDSHTMAIISGNLVYGWGF 191

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG  D    + P K+  F  K V QI CG +HS+ L    +  QVY +GS + GQ
Sbjct: 192 NQAGQLGFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIAL---TVEGQVYSWGSNEYGQ 248

Query: 213 LGVS 216
           LG+ 
Sbjct: 249 LGIQ 252



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G +GQLG G   +E  P+ +       V  +ACG +H +A+ S     G  V+
Sbjct: 133 KLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIIS-----GNLVY 187

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG   +GQLG  ++     PK + FF+  +  +  I  G  HS  ++  G +++ G   
Sbjct: 188 GWGFNQAGQLGFQDLSRVNLPKKIMFFN--QKEVVQIQCGKKHSIALTVEGQVYSWGSNE 245

Query: 155 FGQLG 159
           +GQLG
Sbjct: 246 YGQLG 250



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 50/243 (20%)

Query: 167 SSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           S PV+++  +    + +I     +S+ +  D  GN V+ +GSG+ G+LG  KD ++    
Sbjct: 46  SDPVQITPDYWQGKLEKIYAQSNYSMSI--DTKGN-VFSWGSGEFGRLGYEKD-VKYQKY 101

Query: 226 PQV--TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS 277
           P++  T  + +I +  I+     SAA + +G LYTWG+G N      S  +   P+ +  
Sbjct: 102 PKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKE 161

Query: 278 --SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRPLSVALEKVSNL 333
              +   + A G +H + +     V   G +  G L   D  RV+  +       K+   
Sbjct: 162 FQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDLSRVNLPK-------KIMFF 214

Query: 334 DGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQ 393
           +  +V+QI  G +HS  +T +                            + +WG  E+GQ
Sbjct: 215 NQKEVVQIQCGKKHSIALTVEGQ--------------------------VYSWGSNEYGQ 248

Query: 394 LGL 396
           LG+
Sbjct: 249 LGI 251


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 160/337 (47%), Gaps = 34/337 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D + P+L++  S +++ ++ACG  H  A+T     + G ++
Sbjct: 330 EIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVT-----LSGDLY 384

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 385 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 442

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P +V S       Q ACG+ H+  +++  +GN         ++
Sbjct: 443 DGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKL 502

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      + V  P     L +     ++     + A +  GH+YT    
Sbjct: 503 FTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSP 560

Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N  +D   P  +   LS S   + A G  HV VLT   EV   G   +G L   
Sbjct: 561 VYGQLGNPLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 620

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +      P       V  L   +V  IA G   +A +
Sbjct: 621 DTDDRNSP-----SLVEALKDKQVKSIACGTSFTAAI 652



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 148/379 (39%), Gaps = 65/379 (17%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +D+L+PK +         + +I+ G  H+  V+  G +F+ G+ + G+LGHG     
Sbjct: 293 GVKMDSLFPKALE--SAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV 350

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVS 224
             P  + +  N N+  +ACG  H+  +    L   +Y +G G    G LG   +    V 
Sbjct: 351 MHPKLIDALSNTNIELVACGEYHTCAV---TLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 407

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS- 277
             +V   L  I +  IS     +A +++ G L+T+G       G      ++ P+ + S 
Sbjct: 408 -KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESL 466

Query: 278 -SLSFSQAALG-WNHVLVL-----------TGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             L   QAA G W+   V+              G++   G    G L   ++ +   P  
Sbjct: 467 KGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 526

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP------------- 371
           VA     N       Q+A G   +   T   H   +    Y     P             
Sbjct: 527 VAALVEPNF-----CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGK 581

Query: 372 -------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                        + + V+     + TWG G +G+LG G+T D+  P +V        +D
Sbjct: 582 LSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA-----LKD 636

Query: 419 TQLE-VFCGSGFTYAISRH 436
            Q++ + CG+ FT AI  H
Sbjct: 637 KQVKSIACGTSFTAAICLH 655


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3015 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3068

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3069 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKR--IRDIACGSSHSAALTSSGELYTW 3126

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3127 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3183

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3184 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3241

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3242 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3301

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3302 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3350



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+VFSWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVFSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSF 281
             L D+E+V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4117

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4234

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4235 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 124/284 (43%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ V    G    +  ++AG
Sbjct: 4051 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRG--IEVVDVAAG 4103

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V       V  +ACG     +L 
Sbjct: 4104 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLC 4163

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4164 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTK 4218

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4219 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4279 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4317



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    +  V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GLH  +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  +   +   V  + CG    +ALT       G V++
Sbjct: 4170 VWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTK-----SGAVYT 4224

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4225 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4282

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4283 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4013

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4014 GYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GEVYSWGEA 4070

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4071 EDGKLGHGS---RSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4127

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L   L   +        G    L LT D  V   G   +G L      
Sbjct: 4128 GHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4187

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4188 GCKVPM-----KIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4242

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4243 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4302

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4303 QGKKVNR-----VACGSAHTLAWS 4321



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 125/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +++WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  Q        A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ +  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLEV-VKVRCGSQFSVALTK 675



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 52/241 (21%)

Query: 200  NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y  
Sbjct: 2962 TKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 3019

Query: 260  GRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHH 308
            G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G    
Sbjct: 3020 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3079

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L    R++  +P       +  L   ++  IA G+ HSA +T                
Sbjct: 3080 GKLGHFSRMNCDKP-----RLIEALRAKRIRDIACGSSHSAALTSSGE------------ 3122

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCG 426
                          + TWG GE+G+LG G+   Q+ PK+V   LG         ++V CG
Sbjct: 3123 --------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVACG 3162

Query: 427  S 427
            S
Sbjct: 3163 S 3163



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 75/353 (21%), Positives = 124/353 (35%), Gaps = 113/353 (32%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V+ +AC     L L+       G+V++    S          D L P+ V          
Sbjct: 454 VTQIACAEKRFLILSR-----NGRVYTQAYNS----------DTLAPQLVQGLASRNIVK 498

Query: 129 THISAGWNHSGFVSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
               +  +H   ++ +G +F+  CGDG  G+LGHGD      P  +S+F           
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCGDG--GRLGHGDTVPLEEPKVISAF----------- 545

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
                               SGK+G                   G H   +V I+     
Sbjct: 546 --------------------SGKQG-------------------GKH---VVHIACGSTY 563

Query: 247 SAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTG 296
           SAA++AEG LYTWGRG        S+ D   P  +     L     A G      L +T 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
           +G+V   G   +G L          P     + +  L  ++V+++  G++ S  +T    
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTP-----KLIEKLQDLEVVKVRCGSQFSVALT---- 674

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                 ++  + +WG G++ +LG G      +P+++ 
Sbjct: 675 ----------------------KDGQVYSWGKGDNQRLGHGTEEHVRYPRLLE 705



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPSSAGKL 4331


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
           KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 48  KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 101

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 102 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 159

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
           G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 160 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 216

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
             G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 217 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 274

Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
             SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 275 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 334

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
           +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 335 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 383



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 1150

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 1151 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 1210

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 1211 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 1267

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 1268 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1311



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 1084 GGKHCLALSSE-----GEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 1136

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 1137 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 1196

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 1197 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 1251

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 1252 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1311

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 1312 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 1350



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 158/382 (41%), Gaps = 57/382 (14%)

Query: 62  NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
            LS+L+ V  +A G   + A+T     + GKV+S G  ++G+LG G M     P P    
Sbjct: 24  TLSALNVV-QVAGGSKSLFAVT-----VEGKVYSCGEATNGRLGLG-MSSGTVPIPRQIT 76

Query: 122 DGHRYTITHIS--AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
               Y +  ++  +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K 
Sbjct: 77  ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR 136

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIV 238
           +  IACG  HS  L       ++Y +G G+ G+LG   +  +    + +V +G H +  V
Sbjct: 137 IRDIACGSSHSAALTS---SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQV 192

Query: 239 GISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNH 290
              +   ++ AL+ EG +++WG G         +   N PQ++   +     Q   G   
Sbjct: 193 ACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQF 252

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            L LT  G V   G   +  L     V   +P     + V  L G K++ +A GA H   
Sbjct: 253 SLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLA 307

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
           VT                          ++  +  WG  +HGQ G G T     P +V  
Sbjct: 308 VT--------------------------DSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ- 340

Query: 411 GDEFQNRDTQLEVFCGSGFTYA 432
           G E Q       V CGS  + A
Sbjct: 341 GLEGQK---ITRVACGSSHSVA 359



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 1203 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 1257

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 1258 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 1315

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 1316 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1351



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 1046

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 1047 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 1103

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            K G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 1104 KDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 1160

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 1161 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 1220

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 1221 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 1275

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 1276 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 1335

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 1336 QGKKVNR-----VACGSAHTLAWS 1354



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 50/218 (22%)

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQSL 275
           + +P  +  L  + +V ++       A++ EG +Y+ G   N       S+  V  P+ +
Sbjct: 16  IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 75

Query: 276 P--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
              SS    + A+  G  H   LT DG+V   G    G L    R++  +P       + 
Sbjct: 76  TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIE 130

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L   ++  IA G+ HSA +T                              + TWG GE+
Sbjct: 131 ALKTKRIRDIACGSSHSAALTSSGE--------------------------LYTWGLGEY 164

Query: 392 GQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 427
           G+LG G+   Q+ PK+V   LG         ++V CGS
Sbjct: 165 GRLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 196



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 1306 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 1364


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 24/328 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D   PQ +        + + CG  + +A+         +V+S
Sbjct: 31  VLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDK----QVYS 86

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LG G++ D   P P+    G R  +  ++ G  H+   +  G LF  G    
Sbjct: 87  WGWGDFGRLGTGDVKDVFIPCPLPALAGRR--VASVACGDTHTLVATAEGQLFAFGRNQN 144

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQ G G  +    P  V++   K V  +ACG  HS+ +  +    +VY +G G+ G +G 
Sbjct: 145 GQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSE---GEVYCWGWGRYGNIGD 201

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST------SDV 269
            + + R   LP +  GL  +++  ++     S A+   G +YTWG G  +        D 
Sbjct: 202 GESQDR--HLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDH 259

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P+ + +    +  A GW H +     G +   G +  G           R     +++
Sbjct: 260 YVPKRVEAVQQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVR-----VQQ 314

Query: 330 VSNLDGVKVIQIAAGAEHSAVV--TGKF 355
           V  L G +V+Q+ +G +H+  V  TGKF
Sbjct: 315 VEALAGERVVQVKSGWKHTMAVTHTGKF 342



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 17/273 (6%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           LACG +H LAL S  S  G  V SWGRG  GQLGHG+  D   P+ V        T  H 
Sbjct: 12  LACGSSHSLALISTPS--GSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHC 69

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            A ++ +    D   +++ G G FG+LG GD +    P  + +   + V  +ACG  H+L
Sbjct: 70  GAEYSMAVAGGDKQ-VYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL 128

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
           V   +    Q++ FG  + GQ G+    I+    PQ+   L   E+V ++   + S  ++
Sbjct: 129 VATAE---GQLFAFGRNQNGQCGLGS--IQDCLEPQLVTALQGKEVVAVACGAEHSMCVT 183

Query: 252 AEGHLYTWGRGF--NSTSDVNCPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLML 303
           +EG +Y WG G   N     +  + LP+       +  +Q   GW H + +   G +   
Sbjct: 184 SEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTW 243

Query: 304 GGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDG 335
           G   +  L   +R     P  V A+++V+ + G
Sbjct: 244 GWGAYAQLMQGDRKDHYVPKRVEAVQQVATVAG 276



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++++G   +GQ G G + D L PQL+       V  +ACG  H + +TS      G+V+
Sbjct: 135 QLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSE-----GEVY 189

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G +G GE  D   P      +G +  +  ++ GW HS  V + G ++T G G 
Sbjct: 190 CWGWGRYGNIGDGESQDRHLPTLAKGLEGVK--VAQVNCGWRHSIAVDEGGAMYTWGWGA 247

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           + QL  GD + H  P +V +   + V  +A G RH++    D  G +++  G  K GQ G
Sbjct: 248 YAQLMQGDRKDHYVPKRVEAV--QQVATVAGGWRHTMA--ADSQG-RLFASGWNKFGQCG 302

Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST------ 266
           V  ++D +R     Q    L    +V + +    + A++  G  ++WGR  N        
Sbjct: 303 VGHNEDVVRV----QQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGM 358

Query: 267 SDVNCPQSLPS 277
            D N P  L +
Sbjct: 359 QDSNSPVELAA 369



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 24/301 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LGTG + D   P  L   +   V+ +ACG  H L  T+      G++F
Sbjct: 83  QVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAE-----GQLF 137

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++GR  +GQ G G + D L P+ VT   G    +  ++ G  HS  V+  G ++  G G 
Sbjct: 138 AFGRNQNGQCGLGSIQDCLEPQLVTALQGKE--VVAVACGAEHSMCVTSEGEVYCWGWGR 195

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G G+ +    P          V Q+ CG RHS+ + +   G  +Y +G G   QL 
Sbjct: 196 YGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDE---GGAMYTWGWGAYAQL- 251

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYT--WGR----GFNSTS 267
           +  DR +   +P+    +  +  V   A G R + A  ++G L+   W +    G     
Sbjct: 252 MQGDR-KDHYVPKRVEAVQQVATV---AGGWRHTMAADSQGRLFASGWNKFGQCGVGHNE 307

Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           DV   Q +   +     Q   GW H + +T  G+    G + +G L       S  P+ +
Sbjct: 308 DVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSPVEL 367

Query: 326 A 326
           A
Sbjct: 368 A 368



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 112/272 (41%), Gaps = 45/272 (16%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           + + G G  GQLGHGD      P  V S +++    + CG  +S+ +       QVY +G
Sbjct: 31  VLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGG--DKQVYSWG 88

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
            G  G+LG     ++ V +P     L    +  ++     +   +AEG L+ +GR     
Sbjct: 89  WGDFGRLGTGD--VKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQ 146

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  S  D   PQ L ++L   +    A G  H + +T +GEV   G   +G + D E  
Sbjct: 147 CGLGSIQDCLEPQ-LVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGE-- 203

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           S  R L    +    L+GVKV Q+  G  HS  V                          
Sbjct: 204 SQDRHLPTLAK---GLEGVKVAQVNCGWRHSIAVD------------------------- 235

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            E  A+ TWGWG + QL  G+  D   PK V 
Sbjct: 236 -EGGAMYTWGWGAYAQLMQGDRKDHYVPKRVE 266


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 182/407 (44%), Gaps = 74/407 (18%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G+ FSWG  S G+LGHG   +  
Sbjct: 333 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHGVDSNVQ 387

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
           +PK +   +     I  ++ G  HS  V+ SG L+T G G FG LGHG+  SH  P +V 
Sbjct: 388 HPKLIDALNT--TNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRV- 444

Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           +F+ + +H   IACG  H+ V+       Q++ FG G  G LG   DR +SV +P+    
Sbjct: 445 NFLMEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-KSVFIPREVDS 499

Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST---SDVNCPQSLP 276
           L  +  V  +     +AA+             + G L+TWG G  S     D   P+ +P
Sbjct: 500 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE-PKLVP 558

Query: 277 SSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           + ++      F Q A G +  + LT  G V  +G   +G L +P       P  V     
Sbjct: 559 TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPTRVD---- 613

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L    V +IA GA H AV+T +                            + TWG G 
Sbjct: 614 GKLHKSFVEEIACGAYHVAVLTSRTE--------------------------VYTWGKGS 647

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V        +D Q++ + CGS FT A+  H
Sbjct: 648 NGRLGHGDADDRNSPTLVE-----SLKDKQVKSIACGSNFTAAVCLH 689



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 32/333 (9%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +SWG  ++G+LG G   +   P+L++  + +++ ++ACG  H  A+T     + G +++W
Sbjct: 368 FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVT-----LSGDLYTW 422

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G+G  G LGHG  V    PK V F  +G    ++ I+ G  H+  V+ +G LFT GDGTF
Sbjct: 423 GKGDFGILGHGNEVSHWVPKRVNFLMEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 480

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
           G LGHGD +S   P +V S       + ACG+ H+  +++  +G+         +++ +G
Sbjct: 481 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 540

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
            G + +LG      + V  P     L +     ++     + AL+  GH+YT     +G+
Sbjct: 541 DGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 598

Query: 262 GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             N  +D   P  +   L  S   + A G  HV VLT   EV   G   +G L   +   
Sbjct: 599 LGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADD 658

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              P       V +L   +V  IA G+  +A V
Sbjct: 659 RNSPT-----LVESLKDKQVKSIACGSNFTAAV 686



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G    +L P  +      +   +ACG +  +ALT+      G V+
Sbjct: 535 KLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 589

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+    D   P   T  DG  H+  +  I+ G  H   ++    ++T G 
Sbjct: 590 TMGSPVYGQLGNPH-ADGKVP---TRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 645

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           G+ G+LGHGD    +SP  V S  +K V  IACG
Sbjct: 646 GSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 679


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4176 YGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4315



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG+  +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGLGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 177/438 (40%), Gaps = 59/438 (13%)

Query: 7    EETEKGKS-ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
            EE +KG + +LI    P +E     +   KV+ WG     QLG  +      P      S
Sbjct: 2934 EEDDKGSTGSLIRKKTPGLESTATIR--TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 2991

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
              +V  +A G   + A+T     + GKV+S G  ++G+LG G M     P P        
Sbjct: 2992 ALNVVQVAGGSKSLFAVT-----VEGKVYSCGEATNGRLGLG-MSSGTVPIPRQITALSS 3045

Query: 126  YTITHIS--AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
            Y +  ++  +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K +  I
Sbjct: 3046 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3105

Query: 184  ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
            ACG  HS  L       ++Y +G G+ G+LG   +  +    + +V +G H +  V    
Sbjct: 3106 ACGSSHSAALTS---SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGT 3161

Query: 243  NGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVL 294
               ++ AL+ EG +++WG G         +   N PQ++   +     Q   G    L L
Sbjct: 3162 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221

Query: 295  TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            T  G V   G   +  L     V   +P     + V  L G K++ +A GA H   VT  
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVT-- 3274

Query: 355  FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                                    ++  +  WG  +HGQ G G T     P +V  G E 
Sbjct: 3275 ------------------------DSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEG 3309

Query: 415  QNRDTQLEVFCGSGFTYA 432
            Q       V CGS  + A
Sbjct: 3310 QK---ITRVACGSSHSVA 3324



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4222

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 157/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4011

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4069 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
             S  P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4186 GSKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4241 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4300

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4301 QGKKVNR-----VACGSAHTLAWS 4319



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 657 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 687

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LGLG      +PK++ 
Sbjct: 688 QRLGLGTEEHVRYPKLLE 705



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 153/334 (45%), Gaps = 45/334 (13%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGA--HVLALTSPSSVIGG 91
           G G+ G+LG G   D     L  LS +S+      + +    G+  H LALT       G
Sbjct: 543 GEGSYGRLGMGNSDD-----LFTLSPISALQGYVVIQIATSRGSDGHSLALTD-----SG 592

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +VFSWG G  G+LGHG       P+ +    G    + +++ G+ HS  V+  G LFT G
Sbjct: 593 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEE--VVNMACGFKHSAVVTVDGKLFTFG 650

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G +G+LGHG+  +  +P +V++     + Q+ACG+ H+LVL  D  GN V+ FG G  G
Sbjct: 651 NGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSAD--GNTVWAFGDGDYG 708

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----------- 260
           +LG+     ++   PQ    L  I    I      S  L+ +G ++++G           
Sbjct: 709 KLGLGSCTAKTS--PQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGR 766

Query: 261 -RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
            RG      +   Q+L S        +G  HVL LT  GEV   G +  G L      + 
Sbjct: 767 LRGPQKPQQI---QALASHF-IDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQ 822

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
             P  +      +L G  + QI+AG  HSA  T 
Sbjct: 823 REPCVIP-----DLKGKNIRQISAGRNHSAAWTA 851



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 13/231 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G    +  P+ +       V  +ACG  H   +T     + GK+F
Sbjct: 593 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVT-----VDGKLF 647

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
           ++G G  G+LGHG   +   P+ VT  + H   I  ++ G NH+  +S D   ++  GDG
Sbjct: 648 TFGNGDYGRLGHGNSANKKTPERVTALEKH--AIGQVACGLNHTLVLSADGNTVWAFGDG 705

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G   + +SP  +         +I CG + S+VL  D    +V+ FG  +    
Sbjct: 706 DYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTND---GRVFSFGQER--LT 760

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           G  + R+R    PQ    L    I  +    +   AL++ G ++ WG   +
Sbjct: 761 GQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVD 811



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 162/388 (41%), Gaps = 70/388 (18%)

Query: 39  WGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WG G  GQL  +GR  +   P +    SL+S   + CG      +      + G + + G
Sbjct: 493 WGGGRHGQLAESGRGVN--VPTVTK--SLASAQQVVCGQNCTFVVQ-----VNGTILACG 543

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFG 156
            GS G+LG G   D     P++   G+       S G + HS  ++DSG +F+ GDG +G
Sbjct: 544 EGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYG 603

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           +LGHG+      P ++ +   + V  +ACG +HS V+  D    +++ FG+G  G+LG  
Sbjct: 604 KLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVD---GKLFTFGNGDYGRLGHG 660

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWGR------GFNSTSDV 269
               +    P+    L    I  ++   + +  LSA+G+ ++ +G       G  S +  
Sbjct: 661 NSANKKT--PERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAK 718

Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG-----GSHHGMLSDPERVSSTRP 322
             PQ++   + +   +   G    +VLT DG V   G     G   G L  P++    + 
Sbjct: 719 TSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQA 778

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           L+             +  +  GAEH                            V+A    
Sbjct: 779 LASHF----------IDDVCVGAEH----------------------------VLALTST 800

Query: 383 IMTWGWGEH--GQLGLGNTCDQIHPKVV 408
              WGWG +  GQLGLG++  Q  P V+
Sbjct: 801 GEVWGWGNNVDGQLGLGHSNAQREPCVI 828



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 11/218 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++++G G  G+LG G   ++ +P+ +      ++  +ACG  H L L    S  G  V+
Sbjct: 645 KLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVL----SADGNTVW 700

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G G  G+LG G       P+ +    G       I  G   S  +++ G +F+ G   
Sbjct: 701 AFGDGDYGKLGLGSCTAKTSPQAIDVLAG--IGCKKICCGTQFSVVLTNDGRVFSFGQER 758

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
                 G  R    P ++ +  +  +  +  G  H L L       +V+G+G+   GQLG
Sbjct: 759 LTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTST---GEVWGWGNNVDGQLG 815

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           +     +    P V   L    I  ISA  + SAA +A
Sbjct: 816 LGHSNAQRE--PCVIPDLKGKNIRQISAGRNHSAAWTA 851



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 97/352 (27%)

Query: 90  GGK--VFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           GGK   + WG G  GQL   G  V+      V        +   +  G N +  V  +G 
Sbjct: 485 GGKCDAYLWGGGRHGQLAESGRGVN------VPTVTKSLASAQQVVCGQNCTFVVQVNGT 538

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR---HSLVLLKDCLGNQVY 203
           +  CG+G++G+LG G+     +   +S+     V QIA       HSL L       +V+
Sbjct: 539 ILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTD---SGEVF 595

Query: 204 GFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            +G G  G+LG  + DR R    P+    L   E+V +                      
Sbjct: 596 SWGDGDYGKLGHGNSDRQRR---PRQIEALRGEEVVNM---------------------- 630

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                                 A G+ H  V+T DG++   G   +G L      +   P
Sbjct: 631 ----------------------ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTP 668

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                E+V+ L+   + Q+A G  H+ V++                         A+   
Sbjct: 669 -----ERVTALEKHAIGQVACGLNHTLVLS-------------------------ADGNT 698

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           +  +G G++G+LGLG+   +  P+ +++      +    ++ CG+ F+  ++
Sbjct: 699 VWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCK----KICCGTQFSVVLT 746


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 182/414 (43%), Gaps = 101/414 (24%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG    G+LG G       P+L+   S+ +V  +ACG  H  A+T+      G +
Sbjct: 280 AEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITAT-----GDL 334

Query: 94  FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+  +G LGHG  V    PK V+   +G    ++ +S G  H+  ++ SG L+T 
Sbjct: 335 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEG--LQVSAVSCGTWHTALITSSGKLYTF 392

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYG 204
           GDGTFG LGHG+  + S P +V S        ++CG+ H+  +++  +        +++ 
Sbjct: 393 GDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFT 452

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GDRS+ L              
Sbjct: 453 WGDGDKYRLG----------------------------HGDRSSKLK------------- 471

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                  P  +PS    +F +A  G    + LT  G +   G S +G L +P   +  R 
Sbjct: 472 -------PTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPN--NDGRY 522

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             +  EK   L G  V+++A GA H AV+T                          ++  
Sbjct: 523 PRLVEEK---LGGGGVVEVACGAYHVAVLT--------------------------QSGE 553

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P  V   +  ++R  +  + CGSGFT AI +H
Sbjct: 554 VYTWGKGANGRLGHGDIADRKTPTFV---EALRDRSVK-RIACGSGFTAAICQH 603



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 120/333 (36%), Gaps = 90/333 (27%)

Query: 91  GKVFSWGR----------GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
           G V+ WG             S         D L PKP+         +++++ G  H+  
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLE--SNVMLDVSYVACGVKHAAL 275

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V+    +FT G+   G+LGHG   S   P  V S    NV  IACG  H+  +     G+
Sbjct: 276 VTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAIT--ATGD 333

Query: 201 -QVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
              +G G+   G LG    VS    + VS P     L  +++  +S     +A +++ G 
Sbjct: 334 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSGP-----LEGLQVSAVSCGTWHTALITSSGK 388

Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           LYT+                                    GDG   +LG  +   +S P+
Sbjct: 389 LYTF------------------------------------GDGTFGVLGHGNRETISYPK 412

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
            V S             L G++ I ++ G  H+A V      V + +          F  
Sbjct: 413 EVES-------------LKGLRTISVSCGVWHTAAV------VEVIMAQSNTSSGKLF-- 451

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                    TWG G+  +LG G+   ++ P  V
Sbjct: 452 ---------TWGDGDKYRLGHGDRSSKLKPTCV 475



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  +V++WG G +G+LG G + D  +P  +      SV  +ACG     A+    SV G
Sbjct: 550 QSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSG 608


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3079 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3132

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3133 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3190

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3191 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3247

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3248 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3305

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3306 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3365

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3366 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3414



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 549 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 603

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 604 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 663

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 720

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 721 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 780

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 781 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 835

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 836 ACGPAQSFAWSSCSEW 851



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4181

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4182 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4241

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4298

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4299 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4115 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4167

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4227

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4228 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4282

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4283 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4342

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4343 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4381



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 584 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 638

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 639 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 698

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 699 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 755

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 756 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4234 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4288

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4346

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4347 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4077

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4078 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4134

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4135 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4191

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4192 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4251

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4252 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4306

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4307 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4366

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4367 QGKKVNR-----VACGSAHTLAWS 4385



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 497 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 545

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 546 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 601

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 602 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 660

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 661 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 691

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 692 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 743



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 3024 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3081

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
            + G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3082 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3141

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3142 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3183

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3184 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3224

Query: 425  CGS 427
            CGS
Sbjct: 3225 CGS 3227



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 552 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 606

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 607 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 666

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 667 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 724

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 725 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 755

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 756 QRLGHGTEEHVRYPKLLE 773



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4337 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4395


>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
          Length = 1386

 Score =  122 bits (306), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 95/293 (32%), Positives = 136/293 (46%), Gaps = 34/293 (11%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV 69
            +K +  L+   K KI  +  + Q  KV+ WG+G DG+ G G+   E  P   N S   + 
Sbjct: 911  KKEQMQLLPRIKLKIFGQVNKNQSYKVFVWGSGKDGRCGNGKESSEKLPNQANTS--HNF 968

Query: 70   SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
            + L+CG  H  A+TS      G + SWGRG  GQLGHG+  +   P P+      +  I 
Sbjct: 969  TQLSCGYHHSAAVTS-----DGMILSWGRGIFGQLGHGDTENYSLPTPIEAL--VKIQII 1021

Query: 130  HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGM 187
             +S GW HS  +S  G +F+ G G  GQLGHGD   +  P ++  F     NV  IACG 
Sbjct: 1022 QVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGH 1081

Query: 188  RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI---------------GL 232
             HS   + D   +Q+Y +G     +L + ++   +  LP +TI                L
Sbjct: 1082 SHS-GCITDGQSSQLYLWGCNPDCRLMIEEN--ENQLLPTLTILEQAKMKNYERGDQLKL 1138

Query: 233  HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-----QSLPSSLS 280
              +E   +S     +A ++  G LYT G   +    VN       QS PSSLS
Sbjct: 1139 EGLEPCYLSLGVTHTAIVTRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLS 1191



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 144/380 (37%), Gaps = 77/380 (20%)

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            KVF WG G  G+ G+G+      P          +  T +S G++HS  V+  G + + G
Sbjct: 936  KVFVWGSGKDGRCGNGKESSEKLPNQAN----TSHNFTQLSCGYHHSAAVTSDGMILSWG 991

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             G FGQLGHGD  ++S P  + + V   + Q++CG +HS+ L       +++ +G G+ G
Sbjct: 992  RGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQ---GRIFSWGYGEDG 1048

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEI-VGISANGDRSAALSAEG---HLYTWGRGFNS-- 265
            QLG          LP+         I VG+ A G   +    +G    LY WG   +   
Sbjct: 1049 QLG--HGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQLYLWGCNPDCRL 1106

Query: 266  TSDVNCPQSLPSSLSFSQA---------------------ALGWNHVLVLTGDGEVLMLG 304
              + N  Q LP+     QA                     +LG  H  ++T  GE+   G
Sbjct: 1107 MIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTAIVTRSGELYTGG 1166

Query: 305  GSHHGML-----------SDPERVSSTRPLSVALE-------------KVSNLDGVKVIQ 340
                G L           S P  +S+T  L                  K  +L   +V  
Sbjct: 1167 SMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKELKSQSLPIYRVDF 1226

Query: 341  IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
             +A  + + V  G                   F  V+ E   +  +G   HG+LG+GN  
Sbjct: 1227 FSAQNKATQVSCGD-----------------AFTIVLNERNEVYAFGKLSHGRLGVGNGQ 1269

Query: 401  DQIHPKVVNLGDEFQNRDTQ 420
            +    K   L    QN+  Q
Sbjct: 1270 NLNQQKTNQLKQSIQNQTYQ 1289



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 85/335 (25%), Positives = 134/335 (40%), Gaps = 92/335 (27%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
            +++SWG G DGQLG G  +D L P+ ++    +S  V M+ACG +H   +T   S    +
Sbjct: 1038 RIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQS---SQ 1094

Query: 93   VFSWGRGSSGQLGHGEMVDALYP--------KPVTFFDGHRYTIT-----HISAGWNHSG 139
            ++ WG     +L   E  + L P        K   +  G +  +      ++S G  H+ 
Sbjct: 1095 LYLWGCNPDCRLMIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTA 1154

Query: 140  FVSDSGCLFTCGDGTFGQLG------------------------------------HGDY 163
             V+ SG L+T G    GQLG                                      + 
Sbjct: 1155 IVTRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKEL 1214

Query: 164  RSHSSPV-KVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS----- 216
            +S S P+ +V  F  +N   Q++CG   ++VL +    N+VY FG    G+LGV      
Sbjct: 1215 KSQSLPIYRVDFFSAQNKATQVSCGDAFTIVLNER---NEVYAFGKLSHGRLGVGNGQNL 1271

Query: 217  --------KDRIRS------------VSLPQVTIGLHDIE-IVGISANGDRSAALSAEGH 255
                    K  I++            ++ PQ+   L   E +V ISA    +A ++  G 
Sbjct: 1272 NQQKTNQLKQSIQNQTYQSTEGSNDCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDSGK 1331

Query: 256  LYTWGRGF-------NSTSDVNCPQSLPSSLSFSQ 283
            LY WG  F       +S  D + P  +   L  S+
Sbjct: 1332 LYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSK 1366



 Score = 41.2 bits (95), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 128  ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-RSHSSPVKVSS-FVNKNVHQIAC 185
            +  ISAG  H+  V+DSG L+  G   + QLG GD  +    P KVS    +  V  ++C
Sbjct: 1313 VVQISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFVSC 1372

Query: 186  GMRHSLVLLK 195
            G  H+  L++
Sbjct: 1373 GYFHTGALVQ 1382


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 152/327 (46%), Gaps = 31/327 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC-----GGAHVLALTSPSSVIG 90
           V++ G GT G+LG G   DE S  L+ ++ L    ++       G  H LA+        
Sbjct: 340 VFACGEGTYGRLGQGTSDDEHS--LVPITELQGYCIIQLATSLGGDGHTLAVAD-----S 392

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+VFSWG G  G+LGHG       PK +         +   S G+ HS  ++  G +FT 
Sbjct: 393 GEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEH--VVQASCGFKHSAVLTKDGKVFTF 450

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG G      +P  + S  N+++ QIACG  H+L L  +  G ++Y +G G+ 
Sbjct: 451 GQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANN--GKKLYAWGDGEF 508

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNST 266
           G+LG+    +RS+  P +     ++ +  I+     S  L+  G+LYT+G     G   T
Sbjct: 509 GKLGLGSTSVRSI--PNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAET 566

Query: 267 S--DVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
              D   PQ + S +       A+G N++L L   G +   G +  G L     + +T P
Sbjct: 567 DLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLG----IGTTNP 622

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSA 349
             +  + V    G  + +++AG  H A
Sbjct: 623 HYLP-QLVCTFSGTNITRLSAGTTHCA 648



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 174/389 (44%), Gaps = 61/389 (15%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + V+ WG+   G+L   +    L P L+  S+   V  + CG      L +      G V
Sbjct: 288 ITVYVWGSNIHGELPGLQGKTCLQPNLV--STFKQVREIVCGQNCTFLLQT-----NGSV 340

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA---GWNHSGFVSDSGCLFTC 150
           F+ G G+ G+LG G   D     P+T   G  Y I  ++    G  H+  V+DSG +F+ 
Sbjct: 341 FACGEGTYGRLGQGTSDDEHSLVPITELQG--YCIIQLATSLGGDGHTLAVADSGEVFSW 398

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LGHG+      P ++ +   ++V Q +CG +HS VL KD    +V+ FG G+ 
Sbjct: 399 GDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKD---GKVFTFGQGQY 455

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG-HLYTWGR------GF 263
           G LG   +  +    PQ+ + L +  I  I+   D + AL+  G  LY WG       G 
Sbjct: 456 GILGDGGNSPQKT--PQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGL 513

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            STS  + P  + S  ++   + A G    +VL  +G +   G      +++ + + +T 
Sbjct: 514 GSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTI 573

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P     + VS+L    +I IA G  +                            ++A + 
Sbjct: 574 P-----QIVSSLMPHPIIDIAVGCNY----------------------------ILALDN 600

Query: 382 AIMTWGWG--EHGQLGLGNTCDQIHPKVV 408
           +   WGWG  E GQLG+G T     P++V
Sbjct: 601 SGNIWGWGTNEEGQLGIGTTNPHYLPQLV 629



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 128/317 (40%), Gaps = 52/317 (16%)

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
           T+    W  S  ++    ++  G    G+L     ++   P  VS+F  K V +I CG  
Sbjct: 276 TNFPKDWEISAPIT----VYVWGSNIHGELPGLQGKTCLQPNLVSTF--KQVREIVCGQN 329

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RS 247
            + +L  +     V+  G G  G+LG          +P   +  + I  +  S  GD  +
Sbjct: 330 CTFLLQTN---GSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHT 386

Query: 248 AALSAEGHLYTWGRGF-------NSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGE 299
            A++  G +++WG G        NS       Q +   +    QA+ G+ H  VLT DG+
Sbjct: 387 LAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGK 446

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   G   +G+L D        P     + + +L    + QIA G +H+  +        
Sbjct: 447 VFTFGQGQYGILGDGGNSPQKTP-----QLILSLKNEHISQIACGKDHTLALANN----- 496

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                                + +  WG GE G+LGLG+T  +  P   NL D ++N   
Sbjct: 497 --------------------GKKLYAWGDGEFGKLGLGSTSVRSIP---NLVDSYRNVCL 533

Query: 420 QLEVFCGSGFTYAISRH 436
           + ++ CGS F+  ++ +
Sbjct: 534 K-KIACGSKFSIVLATN 549



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 7/155 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G       P L++      +  +ACG    + L +      G ++
Sbjct: 499 KLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLAT-----NGYLY 553

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G      +   +++D   P+ V+    H   I  I+ G N+   + +SG ++  G   
Sbjct: 554 TFGHKDFLGIAETDLLDNTIPQIVSSLMPH--PIIDIAVGCNYILALDNSGNIWGWGTNE 611

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            GQLG G    H  P  V +F   N+ +++ G  H
Sbjct: 612 EGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTH 646


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2956 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3009

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3010 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3067

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3068 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3124

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3125 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3182

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3183 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3242

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3243 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3291



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 153/330 (46%), Gaps = 29/330 (8%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 426 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 480

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 597

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 598 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 657

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 658 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 712

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTP 367
           A G   S   +    W   +R+ F++   P
Sbjct: 713 ACGPAQSFAWSSCSEWSIGLRVPFVVDICP 742



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4058

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4059 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4118

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4119 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4175

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4176 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4219



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3992 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4044

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4045 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4104

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4105 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4159

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4160 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4219

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4220 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4258



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 461 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 515

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 575

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 576 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 632

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 633 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4111 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4165

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4166 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4223

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4224 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3954

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4011

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4012 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4068

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4069 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4128

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4129 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4183

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4184 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4243

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4244 QGKKVNR-----VACGSAHTLAWS 4262



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 374 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 422

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 423 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 478

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 479 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 537

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 538 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 568

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 569 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 620



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2901 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2958

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
            + G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 2959 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3019 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3060

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3061 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3101

Query: 425  CGS 427
            CGS
Sbjct: 3102 CGS 3104



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 429 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 483

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 484 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 601

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 602 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 632

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 633 QRLGHGTEEHVRYPKLLE 650



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4214 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4272


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3018 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3071

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3072 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3129

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3130 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3186

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3187 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3244

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3245 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3304

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3305 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3353



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 486 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 540

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 541 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 600

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 657

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 658 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 717

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 718 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 772

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 773 ACGPAQSFAWSSCSEW 788



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4120

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4121 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4180

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4181 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4237

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4238 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4281



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4054 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4106

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4107 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4166

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4167 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4221

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4222 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4281

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4282 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4320



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 521 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 575

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 576 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 635

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 636 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 692

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 693 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4173 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4227

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4228 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4285

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4286 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4321



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4016

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4017 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4073

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4074 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4130

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4131 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4190

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4191 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4245

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4246 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4305

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4306 QGKKVNR-----VACGSAHTLAWS 4324



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 434 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 482

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 483 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 538

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 539 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 597

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 598 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 628

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 629 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 680



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2963 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3020

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
            + G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3021 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3080

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3081 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3122

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3123 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3163

Query: 425  CGS 427
            CGS
Sbjct: 3164 CGS 3166



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 489 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 543

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 544 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 603

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 604 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 661

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 662 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 692

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 693 QRLGHGTEEHVRYPKLLE 710



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4276 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4334


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4315



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4222

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4011

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4069 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4186 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4241 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4300

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4301 QGKKVNR-----VACGSAHTLAWS 4319



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
            + G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3117

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3118 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 657 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 687

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 688 QRLGHGTEEHVRYPKLLE 705



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 1317 KVYACGEATNGRLGLG-LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 1370

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 1371 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 1428

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 1429 GLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGL---VFSWGDG 1485

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 1486 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 1543

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 1544 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 1603

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 1604 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 1652



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 128/285 (44%), Gaps = 29/285 (10%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 2355 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRG--IEVVDVAAG 2407

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 2408 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLC 2467

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 2468 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTK 2522

Query: 253  EGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLML 303
             G +YTWG+      G  S   V  P+ +   L   +A   A G  H +  T DGEV   
Sbjct: 2523 AGAVYTWGKGDYHRLGHGSDDHVRRPRQV-QGLQGKKAIAIATGSLHCVCCTEDGEVYTW 2581

Query: 304  GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            G +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 2582 GDNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 2621



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 2421

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 2422 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGD 2481

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 2482 YGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTK---AGAVYTWGKGDYHRLG 2538

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   + + I+         + +G +YTWG
Sbjct: 2539 HGSDDHVRR---PRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWG 2582



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 167/420 (39%), Gaps = 75/420 (17%)

Query: 23   KIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLAL 82
            +I  EEE+   +KV S+                       LS+L+ V + A G   + A+
Sbjct: 1274 RIRAEEEDLAAIKVPSFSE--------------------TLSALNVVQV-AGGSKSLFAV 1312

Query: 83   TSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFV 141
            T     + GKV++ G  ++G+LG G     +  P+ VT    +      + +G  H+  +
Sbjct: 1313 T-----VEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATAL 1367

Query: 142  SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
            +  G +F+ G+G  G+LGH    +   P  + +   K +  IACG  HS  L       +
Sbjct: 1368 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS---SGE 1424

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWG 260
            +Y +G G+ G+LG   D    +    V + L H +  V   +   ++ AL+ EG +++WG
Sbjct: 1425 LYTWGLGEYGRLG-HGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWG 1483

Query: 261  RG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
             G         +   N PQ++   +     Q   G    L LT  G V   G   +  L 
Sbjct: 1484 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 1543

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
                V   +P     + V  L G K++ +A GA H   VT                    
Sbjct: 1544 HGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVT-------------------- 1578

Query: 373  FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                  ++  +  WG  +HGQ G G T     P +V  G E Q       V CGS  + A
Sbjct: 1579 ------DSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQK---ITRVACGSSHSVA 1628



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 2474 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTK-----AGAVYT 2528

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +     I+ G  H    ++ G ++T GD   
Sbjct: 2529 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIA--IATGSLHCVCCTEDGEVYTWGDNDE 2586

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 2587 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 152/383 (39%), Gaps = 56/383 (14%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 2317

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 2318 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 2374

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
            + G+LG           P+V   L  IE+V ++A G  SA ++A G LYTWG+G      
Sbjct: 2375 EDGKLGHGSRS--PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 2432

Query: 264  NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            +S S+      L  +L   +        G    L LT D  V   G   +G L       
Sbjct: 2433 HSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2492

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFP 370
               P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S      
Sbjct: 2493 CKVPM-----KIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRR 2547

Query: 371  PFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV-NLG 411
            P  +  +   +AI                   TWG  + GQLG G T     P++V  L 
Sbjct: 2548 PRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 2607

Query: 412  DEFQNRDTQLEVFCGSGFTYAIS 434
             +  NR     V CGS  T A S
Sbjct: 2608 GKKVNR-----VACGSAHTLAWS 2625



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 42/211 (19%)

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
            G++   ++ + ++ +P  +  L  + +V ++       A++ EG +Y  G   N      
Sbjct: 1273 GRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 1332

Query: 265  -STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             S+  V  P+ +   SS    + A+  G  H   LT DG+V   G    G L    R++ 
Sbjct: 1333 LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 1392

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             +P       +  L   ++  IA G+ HSA +T                           
Sbjct: 1393 DKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE----------------------- 1424

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
               + TWG GE+G+LG G+T  Q+ PK+V +
Sbjct: 1425 ---LYTWGLGEYGRLGHGDTTTQLKPKMVKV 1452



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 2577 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 2635


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2650 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALT-----VD 2703

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2704 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2761

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2762 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2818

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2819 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2876

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2877 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 2936

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 2937 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 2985



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 169 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 223

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 224 LEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 283

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 340

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 341 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 400

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 401 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 455

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 456 ACGPAQSFAWSSCSEW 471



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3751

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3752 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3811

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3812 YGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3868

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3869 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3912



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3685 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRG--IEVVDVAAG 3737

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 3738 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3797

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 3798 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTK 3852

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3853 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3912

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 3913 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 3951



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P+ ++  S       V  +ACG  +  A+T+      
Sbjct: 204 EVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAE----- 258

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 259 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 318

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 319 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 375

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 376 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 177/437 (40%), Gaps = 57/437 (13%)

Query: 7    EETEKGKS-ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
            EE EKG S +LI      +E     +   KV+ WG     QLG  +      P      S
Sbjct: 2571 EEDEKGGSGSLIRKKAAGLESTATIR--TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 2628

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGH 124
              +V  +A G   + A+T     + GKV++ G  ++G+LG G     +  P+ +T    +
Sbjct: 2629 ALNVVQVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSY 2683

Query: 125  RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
                  + +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K +  IA
Sbjct: 2684 MVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 2743

Query: 185  CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISAN 243
            CG  HS  L       ++Y +G G+ G+LG   +  +    + +V +G H +  V   + 
Sbjct: 2744 CGSSHSAALTS---SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSR 2799

Query: 244  GDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
              ++ AL+ EG +++WG G         +   N PQ++   +     Q   G    L LT
Sbjct: 2800 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2859

Query: 296  GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
              G V   G   +  L     V   +P     + V  L G K++ +A GA H   VT   
Sbjct: 2860 KSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVT--- 2911

Query: 356  HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                                   ++  +  WG  +HGQ G G T     P +V  G E Q
Sbjct: 2912 -----------------------DSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ 2947

Query: 416  NRDTQLEVFCGSGFTYA 432
                   V CGS  + A
Sbjct: 2948 K---ITRVACGSSHSVA 2961



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3804 VWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3858

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 3859 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 3916

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 3917 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3952



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 159/388 (40%), Gaps = 66/388 (17%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3647

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S SSP  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3648 GYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3704

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3705 EDGKLGHGS---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3761

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGML----SD 313
             +S S+      L  +L   +        G    L LT D  V   G   +G L    SD
Sbjct: 3762 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3821

Query: 314  PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISY 365
              +V +         K+ +L G+ V+++  G++ S  +T        GK  + RL   S 
Sbjct: 3822 GCKVPT---------KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3872

Query: 366  TPFFPPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
                 P  +       VIA            E+  + TWG  + GQLG G T     P++
Sbjct: 3873 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRL 3932

Query: 408  V-NLGDEFQNRDTQLEVFCGSGFTYAIS 434
            V  L  +  NR     V CGS  T A S
Sbjct: 3933 VAALQGKKVNR-----VACGSAHTLAWS 3955



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L +           SG+     
Sbjct: 117 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSR-----------SGRVYTQA 165

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 166 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 221

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+++ S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 222 VPLEEPKAI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 280

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 281 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 311

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 312 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 363



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 3907 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSAGKL 3965


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 33/328 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K+++ G GT+G+LG G  ++   P+ +   S   +  +A   GG H LALT       GK
Sbjct: 3014 KLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQ-----DGK 3068

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG  +    PK +      R  I  I+ G  HS  ++ +G L+T G 
Sbjct: 3069 VFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKR--IRDIACGSGHSAAIASNGELYTWGL 3126

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKD-CLGNQVYGFGSGK 209
            G +G+LGHGD  + + P  V + V   V Q+ACG R   ++ L  D C    VY +G G 
Sbjct: 3127 GEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGC----VYSWGDGD 3182

Query: 210  RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
             G+LG  +        P V   L+ + +V +      S AL+  G ++TWG+      G 
Sbjct: 3183 FGKLG--RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGH 3240

Query: 264  NSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
             +   V  P +L   L        A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3241 GNDHHVRKP-TLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            +P       V  L+  +V +++ G+ HS
Sbjct: 3300 KP-----SLVHELEDARVNRVSCGSSHS 3322



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 147/326 (45%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV+S G G  G+LG G     + P LL       +  +A   GG H LAL+S      G 
Sbjct: 3996 KVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSE-----GH 4050

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +   Y +P    D     I  I+ G +HS  ++ +G L+T G 
Sbjct: 4051 VYSWGEGDDGKLGHGNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGK 4108

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD      P  V +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 4109 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4165

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
            G+LG  +       +P     L  + ++ +      S AL+  G +YTWG+G      + 
Sbjct: 4166 GKLG--RGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223

Query: 266  TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D V  P+ + +         A G  H +  +  GEV   G +  G L D    +  RP
Sbjct: 4224 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRP 4283

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4284 -----RLVHALQGKKITRVACGSAHT 4304



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G       P+L+      ++  +ACG  +  AL+     + G++++
Sbjct: 530 VYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALS-----VSGELYT 584

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG--FVSDSGCLFTCGDG 153
           WGRG+ G+LGHG   D + P  VT   GH  T+ H++ G   S    V+ SG +F+ GDG
Sbjct: 585 WGRGNYGRLGHGNFDDVMIPTLVTTLKGH--TVVHVACGSGDSQTLCVTASGIVFSWGDG 642

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G   +L
Sbjct: 643 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAH---GEVYTWGKGDTYRL 699

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G   +    V  P++   L D +I  +S        L+ +  +Y WGR
Sbjct: 700 GHGSE--EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGR 745



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 127/267 (47%), Gaps = 21/267 (7%)

Query: 58  PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
           PQ ++  S   V+M+A    G H LALT       G V+SWG G  G+LGHG+ V    P
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHHLALTQ-----DGCVYSWGNGDGGRLGHGDTVSYDEP 552

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
           K +         I  I+ G  +S  +S SG L+T G G +G+LGHG++     P  V++ 
Sbjct: 553 KLIEAL--LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTL 610

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
               V  +ACG   S  L     G  V+ +G G  G+LG  +        P++   L DI
Sbjct: 611 KGHTVVHVACGSGDSQTLCVTASG-IVFSWGDGDYGKLG--RGGTDGSKTPKIVDKLLDI 667

Query: 236 EIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALG 287
            +V +      SAAL+A G +YTWG+G        S   V  P+ + S         ++G
Sbjct: 668 NVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVG 727

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDP 314
             H+LVLT D  V   G + +G + DP
Sbjct: 728 ATHILVLTEDQFVYGWGRNDYGQI-DP 753



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 170/415 (40%), Gaps = 63/415 (15%)

Query: 32   QVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIG 90
            Q   V+ WG     QLG  +      P     LS L  + +   GG+  L + S      
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHI--AGGSKTLFIVSQE---- 3012

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GK+++ G G++G+LG G+  +   PKP+ F          + +G  H+  ++  G +F+ 
Sbjct: 3013 GKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3072

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+G  G+LGHG+  S   P  + +  +K +  IACG  HS  +  +    ++Y +G G+ 
Sbjct: 3073 GEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASN---GELYTWGLGEY 3129

Query: 211  GQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
            G+LG    V++ R +   L Q  +G H +  V   +   ++ AL+ +G +Y+WG G    
Sbjct: 3130 GRLGHGDTVTQARPK---LVQTLVG-HRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGK 3185

Query: 263  FNSTSDVNCPQSLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
                    C   L     + L   Q   G    L LT  GEV   G   +  L       
Sbjct: 3186 LGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHH 3245

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              +P       V  L G K++ +A GA H   VT                          
Sbjct: 3246 VRKP-----TLVEGLRGKKIVHVAVGALHCLAVT-------------------------- 3274

Query: 379  ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
            +   +  WG  +HGQ G G T     P +V+ L D   NR     V CGS  + A
Sbjct: 3275 DTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNR-----VSCGSSHSIA 3324



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 172/412 (41%), Gaps = 61/412 (14%)

Query: 36   VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            ++ WG    GQLG       +L     +LS+L  +  LA G   + A+T+      GKV+
Sbjct: 3945 IYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQ-LAGGEQTLFAVTA-----DGKVY 3998

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            S G G++G+LG G     + P  +            +S+G  H   +S  G +++ G+G 
Sbjct: 3999 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGD 4058

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
             G+LGHG+  S+  P  +   +   +  IACG  HS  +        +Y +G G+ G+LG
Sbjct: 4059 DGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITS---AGWLYTWGKGRYGRLG 4115

Query: 215  --VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
               S D++R    P+V   L D +++ ++  +GD ++  ++ + ++++WG        RG
Sbjct: 4116 HGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4171

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +    V       + L   +   G    + LT  G V   G   +  L         RP
Sbjct: 4172 GSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRP 4231

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  KV+ L G K+I IA G+ H    + K                            
Sbjct: 4232 -----RKVAALQGKKIISIATGSLHCVACSDKGE-------------------------- 4260

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            + TWG  + GQLG G T     P++V+     Q +     V CGS  T A S
Sbjct: 4261 VFTWGDNDEGQLGDGTTSALHRPRLVH---ALQGKKIT-RVACGSAHTLAWS 4308



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 12/216 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G   D + P L+      +V  +ACG      L   +S   G VF
Sbjct: 581 ELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTAS---GIVF 637

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG G  G+LG G    +  PK V    D     +  +  G   S  ++  G ++T G G
Sbjct: 638 SWGDGDYGKLGRGGTDGSKTPKIVDKLLD---INVVKVFCGSQFSAALTAHGEVYTWGKG 694

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              +LGHG       P  + S  +K +  ++ G  H LVL +D     VYG+G    GQ+
Sbjct: 695 DTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQF---VYGWGRNDYGQI 751

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
             +   +  +S P +   L    ++G+++   +S A
Sbjct: 752 DPTLGSV--ISEPTLCPTLSSKTVIGLASGPTQSFA 785



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 22/196 (11%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  L C    ++ L+     + G V++   GS  Q          YP+ V  F     T+
Sbjct: 467 IKQLCCTERALMILS-----LNGNVYNMYHGSETQ----------YPQRVHGFSDKLVTM 511

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
               +   H   ++  GC+++ G+G  G+LGHGD  S+  P  + + + KN+  IACG  
Sbjct: 512 IASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGST 571

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDR 246
           +S  L    +  ++Y +G G  G+LG        V +P +   L  H +  V   +   +
Sbjct: 572 YSAAL---SVSGELYTWGRGNYGRLG--HGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQ 626

Query: 247 SAALSAEGHLYTWGRG 262
           +  ++A G +++WG G
Sbjct: 627 TLCVTASGIVFSWGDG 642



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 121/307 (39%), Gaps = 65/307 (21%)

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSG 208
           +G    + HG    +  P +V  F +K V  IA     +H L L +D C    VY +G+G
Sbjct: 483 NGNVYNMYHGSETQY--PQRVHGFSDKLVTMIASHSDGKHHLALTQDGC----VYSWGNG 536

Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
             G+LG    VS D       P++   L +  IV I+     SAALS  G LYTWGRG  
Sbjct: 537 DGGRLGHGDTVSYDE------PKLIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNY 590

Query: 263 ----FNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                 +  DV  P  + +    ++       G +  L +T  G V   G   +G L   
Sbjct: 591 GRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG 650

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
               S  P     + V  L  + V+++  G++ SA +T                      
Sbjct: 651 GTDGSKTP-----KIVDKLLDINVVKVFCGSQFSAALTA--------------------- 684

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD-----TQLEVFCGSGF 429
                +  + TWG G+  +LG G+     +PK++    + + +D     T + V     F
Sbjct: 685 -----HGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQF 739

Query: 430 TYAISRH 436
            Y   R+
Sbjct: 740 VYGWGRN 746



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 58/280 (20%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S+P    +     + Q+ C  R  ++L    L   VY    G   Q             P
Sbjct: 454 STPFYCDAIAELGIKQLCCTERALMIL---SLNGNVYNMYHGSETQY------------P 498

Query: 227 QVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS 278
           Q   G  D  + ++   ++G    AL+ +G +Y+WG G         T   + P+ + + 
Sbjct: 499 QRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEAL 558

Query: 279 LSFSQA--ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
           L  +    A G  +   L+  GE+   G  ++G L          P       V+ L G 
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIP-----TLVTTLKGH 613

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
            V+ +A G+  S  +                         +  +  + +WG G++G+LG 
Sbjct: 614 TVVHVACGSGDSQTL------------------------CVTASGIVFSWGDGDYGKLGR 649

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G T     PK+V   D+  + +  ++VFCGS F+ A++ H
Sbjct: 650 GGTDGSKTPKIV---DKLLDINV-VKVFCGSQFSAALTAH 685


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCXEW 783



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4315



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4222

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4011

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4069 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4186 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4241 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4300

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4301 QGKKVNR-----VACGSAHTLAWS 4319



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
            + G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3117

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3118 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 657 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 687

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 688 QRLGHGTEEHVRYPKLLE 705



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 194/424 (45%), Gaps = 69/424 (16%)

Query: 35  KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++WS G   DG + +    +D L+P+ L  + +  V  ++CG  HV  +T       G+V
Sbjct: 232 EIWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTR-----QGEV 286

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG  S G+LGHG      +PK V         I +++ G  H+  +S SG LFT GDG
Sbjct: 287 FTWGEESGGRLGHGIEDHFTHPKLVESL--AVTNIDYVACGEYHTCAISTSGDLFTWGDG 344

Query: 154 T--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           +   G LGHG   SH  P +VS  +    V  IACG  HS +   +    +++ FG G  
Sbjct: 345 SNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSALATSN---GKLFTFGDGTF 401

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA----LSAEG------HLYTWG 260
           G LG   DR +SVS P+    L+ ++ + ++     +AA    +S  G       L+TWG
Sbjct: 402 GALG-HGDR-KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWG 459

Query: 261 RGFN-----STSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G          D     +  SSL   +F Q A G    + LT  G V  +GGS +G L 
Sbjct: 460 DGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG 519

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           +P   SS   +   ++    L G  V +I+ GA H+AV+T +                  
Sbjct: 520 NP---SSNGKIPCLVQ--DRLVGEFVEEISCGAYHTAVLTSRSE---------------- 558

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                     + TWG G +GQLG G+T D+  P +V    E   ++    + CG+ FT +
Sbjct: 559 ----------VFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKN----LSCGANFTSS 604

Query: 433 ISRH 436
           I  H
Sbjct: 605 ICIH 608



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 22/193 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   LACG    +ALT+      G VF
Sbjct: 454 KLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTT-----SGHVF 508

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G  + GQLG+    G++   +  + V  F      +  IS G  H+  ++    +FT 
Sbjct: 509 TMGGSAYGQLGNPSSNGKIPCLVQDRLVGEF------VEEISCGAYHTAVLTSRSEVFTW 562

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---- 206
           G G  GQLGHGD      P  V +   ++V  ++CG   +  +   C+   V G      
Sbjct: 563 GRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSI---CIHKWVSGADQSVC 619

Query: 207 SGKRGQLGVSKDR 219
           SG R   G ++ R
Sbjct: 620 SGCRQAFGFTRKR 632


>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Sarcophilus harrisii]
          Length = 612

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 184/436 (42%), Gaps = 67/436 (15%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVI 89
           + V  + SWGA + GQLG G   D L PQ LN       + +L  GG H   +T      
Sbjct: 186 RAVTLLLSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTDE---- 241

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G++F  G    GQLG G   D L   P T   G    +  +S GW+ +  ++++G + +
Sbjct: 242 -GELFVCGLNKDGQLGLGHTEDVLSFIPCTPLAG--CPVLQVSCGWDFTILLTENGQVLS 298

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG--- 206
           CG  +FGQLG           +V   +N+ V  IA GMRH+L   +  L  Q +G G   
Sbjct: 299 CGSNSFGQLGLPPGTKRQVIPQVIELLNEKVVCIAAGMRHALAATESGLVFQ-WGTGLAS 357

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
           +G+R     +     +   P    GL + ++  + A    SA+L+ EG LY WG      
Sbjct: 358 TGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNKHGQ 417

Query: 263 -FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP--- 314
             +  + +  PQ + +    ++       GW H++  T  G+V   G + +G L      
Sbjct: 418 LLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADYGQLGTKVDG 477

Query: 315 -ER--------VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
            ER        +S TR L+     +  L+GV   ++A G+EH+  V G            
Sbjct: 478 QERCTGDHELLLSCTRTLATMPSSLPCLEGV--TEMACGSEHNLAVVGS----------- 524

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 425
                           +  +WGW EHG  G G   +   PK V    E  +    L V C
Sbjct: 525 ----------------SCYSWGWNEHGMCGDGTEVNVWVPKPV----ESPSLALCLLVGC 564

Query: 426 GSGFTYAISR-HCLPS 440
           G+G + A+ +   LPS
Sbjct: 565 GAGHSLAVGQAPALPS 580


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 181/413 (43%), Gaps = 100/413 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++ +V ++ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTT-----AGELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG+ V    PK +    +G    + ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGKDVSHWIPKRIAGALEG--LAVAYVSCGTWHTALITTMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHG+  S S P +V S        +ACG+ H+  +++  +          +++
Sbjct: 210 DGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLF 269

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G + +LG                            +GD+   L             
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPRLKP----------- 290

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                  C  SL     F + A G +  + LT  G+VL +G + +G L +P        L
Sbjct: 291 ------TCVASLI-DYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCL 343

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                 V  + G  V+Q+A G+ H AV+T K                            +
Sbjct: 344 ------VEEIVGENVVQVACGSYHVAVLTIKSE--------------------------V 371

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+   K+  L +  ++R  +  + CG+ FT AI +H
Sbjct: 372 FTWGKGANGRLGHGDIEDR---KIPTLVEALRDRSVR-HIACGANFTAAICQH 420


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 162/337 (48%), Gaps = 35/337 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG  + G+LG G   D   P+L+   S +++ ++ACG  H  A+T     + G ++
Sbjct: 332 EVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVT-----LSGDLY 386

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    ++ IS G  H+  V+ SG LFT G
Sbjct: 387 TWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 444

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P ++ S       Q ACG+ H+  +++  +GN         ++
Sbjct: 445 DGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKL 504

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      + V    VT+   + +   ++     + ALS  GH+YT    
Sbjct: 505 FTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNCQ---VACGHSMTVALSRSGHVYTMGSC 561

Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N+ +D   P  +   LS S   + A G  HV VLT   EV   G   +G L   
Sbjct: 562 VYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHG 621

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +      P  V       L   +V  IA G   +A +
Sbjct: 622 DTNDRNTPTLVEA-----LKDKQVKSIACGTNFTAAI 653



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 180/406 (44%), Gaps = 71/406 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H   +T       G+VFSWG  S G+LGHG  VD+ 
Sbjct: 299 DSLLPKALESAVVLDVQNIACGGKHAALVTKQ-----GEVFSWGEESGGRLGHG--VDSD 351

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
            P P          I  ++ G  H+  V+ SG L+T GDGT+  G LGHG+  SH  P +
Sbjct: 352 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKR 411

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR +SVSLP+   
Sbjct: 412 VNGPLEGIHVSSISCGPWHTAVVTS---SGQLFTFGDGTFGALG-HGDR-KSVSLPREIE 466

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNSTSDVNCPQS--LP 276
            L  +  V  +     +AA+             + G L+TWG G          +S  +P
Sbjct: 467 SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVP 526

Query: 277 SSL-----SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
           + +        Q A G +  + L+  G V  +G   +G L + +      P+ V      
Sbjct: 527 TCVVTLVEPNCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQ-ADGKLPIRVE----G 581

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L    V +IA GA H AV+T +                            + TWG G +
Sbjct: 582 KLSKSFVEEIACGAYHVAVLTSRTE--------------------------VFTWGKGAN 615

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           G+LG G+T D+  P +V        +D Q++ + CG+ FT AI  H
Sbjct: 616 GRLGHGDTNDRNTPTLVEAL-----KDKQVKSIACGTNFTAAICLH 656


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 167/386 (43%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+ + GQLG G + DE  L+P  +  +  ++V  +ACG  H L LT+      GK
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----NGK 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G     QLGH    +    +P+   +   Y +  IS G  HS  +S+ G + + GD
Sbjct: 61  VYACGSNDHSQLGH----ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGD 116

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH  D      P  V   V+K V QIACG  HSL  L  C   ++Y +GS   G
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173

Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLGV+  + +   + P     L  I +  I+  G+ S  +S  G ++ WGR      G N
Sbjct: 174 QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             ++   P  L +  +L     A G    + LT +G V   G   +G L      +   P
Sbjct: 234 DEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  V  L G  + Q+A G  H+                         + ++     
Sbjct: 294 -----RMVMELMGSTITQVACGNRHT-------------------------LALVPSRGR 323

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  +G G  GQLG  +T   + P+VV
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG     D       L L++L  + +  +ACGG H   ++       G
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            VF WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDEANRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VY FG G  G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 153/355 (43%), Gaps = 52/355 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          +  ++ G  H+ F++ +G ++ 
Sbjct: 4   GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYA 63

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG     QLGH        P+ +    +  V QI+CG RHSL L +     QV  +G   
Sbjct: 64  CGSNDHSQLGHE--LPTKRPLLIPELQDYVVIQISCGSRHSLALSE---WGQVLSWGDND 118

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG + D+   V LP+V   L    +V I+   + S AL++ G LY+WG       G 
Sbjct: 119 CGQLGHATDK-EIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           NS  D+   N P  L + L    AA+  G NH  +++  G V   G ++ G L   +  +
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEAN 237

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P      ++  L  + V  +A G E S  +T +                        
Sbjct: 238 RAYP-----TQLKTLRTLGVRFVACGDEFSVFLTNE------------------------ 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
               + T G G +GQLG G + +++ P++V    E     T  +V CG+  T A+
Sbjct: 269 --GGVFTCGAGAYGQLGHGFSSNEMLPRMVM---ELMG-STITQVACGNRHTLAL 317


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 165/387 (42%), Gaps = 54/387 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           ++++ WG  + GQLG G + DE  L+P  +     S+V+ +ACG  H L LT+      G
Sbjct: 1   MELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTA-----SG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           KV++ G     QLGH    +    +P+   +   Y IT I+ G  HS  +++ G + + G
Sbjct: 56  KVYACGSNDYSQLGH----ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWG 111

Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           D   GQLGH  D      P  V   V+K V QIACG  HSL L   C G ++Y +GS   
Sbjct: 112 DNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL--TCCG-ELYSWGSNIY 168

Query: 211 GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           GQLGV S   +   + P     L  I    I+  G+ +  +S    ++ WGR      G 
Sbjct: 169 GQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N  ++   P  L +  +L     A G    + LT +G V   G   +G L      +   
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 288

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P       V  L G  + Q+A G  H+                         + ++    
Sbjct: 289 P-----RMVMELMGSTISQVACGNRHT-------------------------LALVPSRG 318

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            I  +G G  GQLG  NT     P+VV
Sbjct: 319 RIYGFGLGSSGQLGTRNTKSLNLPQVV 345



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP--QLLNLSSLSSV--SMLACGGAHVLALTSPSSVIG 90
           +++SWG+   GQLG  +   ELS     + L++L  +  + +ACGG H   ++  S+V G
Sbjct: 159 ELYSWGSNIYGQLGV-KSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFG 217

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
                WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTC
Sbjct: 218 -----WGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTC 270

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      ++YGFG G  
Sbjct: 271 GAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS--RGRIYGFGLGSS 328

Query: 211 GQLGVSKDRIRSVSLPQVTIG 231
           GQLG      +S++LPQV IG
Sbjct: 329 GQLGTRN--TKSLNLPQVVIG 347


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 172/413 (41%), Gaps = 101/413 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG G  G+LG     D  SP++++  S   V  +ACG  H  ALT       G V+
Sbjct: 324 EVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTD-----SGDVY 378

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+ S   L     + + +            +I+ I+ G  H+  VS  G LFT GDGT
Sbjct: 379 TWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGT 438

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FG LGHG+Y S SSP +V S     V  +ACG  H+  +                     
Sbjct: 439 FGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAI--------------------- 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVN 270
                                    I  + +R    ++ G L+TWG           +VN
Sbjct: 478 -------------------------IEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVN 512

Query: 271 CPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             + +P+ +S      F Q + G    L LT  G+V  +G + +G L +P      +  +
Sbjct: 513 --KLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPH----VKDRA 566

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V +E +   + VK+I  + G+ H AV+T                           + ++ 
Sbjct: 567 VVVEGMLKQEYVKMI--SCGSYHVAVLTS--------------------------SGSVY 598

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           TWG GE+G+LGLG+T ++  P  V        RD Q++ + CG  FT AI  H
Sbjct: 599 TWGKGENGELGLGDTENRYTPCFVEAL-----RDRQVDTITCGPSFTVAICLH 646


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 175/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   ++S+V  +ACG  H   +T+      G ++
Sbjct: 281 EVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA-----SGDLY 335

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            WG GS  +G LGHG  V    PK V+   +G    +  ++ G  HS     SG LFT G
Sbjct: 336 DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG--LQVLSVACGSWHSALTMSSGKLFTFG 393

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  S + P +V +       ++ACG+ HS  +++       + +  +++ 
Sbjct: 394 DGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFT 453

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GD+ A L              
Sbjct: 454 WGDGDKNRLG----------------------------HGDKEAKLVP------------ 473

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C Q+L    +F Q A G +  + L   G V  +G S++G L +P +    +P  
Sbjct: 474 -----TCVQALVDH-NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNP-KADGKQPCM 526

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V       L    V +I+ G+ H A +T +                            + 
Sbjct: 527 VQ----DKLGNELVEEISCGSNHVAALTSRSE--------------------------VY 556

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V   D  ++R  +  + CGS FT  I  H
Sbjct: 557 TWGMGANGRLGHGSVEDKKKPTLV---DALKDRHVK-SISCGSNFTTCICIH 604



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G    +L P  +      +   +ACG +  +AL +      G VF
Sbjct: 450 KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALAT-----SGHVF 504

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  ++GQLG+ +  D   P  V    G+   +  IS G NH   ++    ++T G G 
Sbjct: 505 TMGSSNNGQLGNPK-ADGKQPCMVQDKLGNEL-VEEISCGSNHVAALTSRSEVYTWGMGA 562

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
            G+LGHG       P  V +  +++V  I+CG   +  +   C+   V G      SG R
Sbjct: 563 NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI---CIHKWVSGADQSVCSGCR 619

Query: 211 GQLGVSKDR 219
              G ++ R
Sbjct: 620 QPFGFTRKR 628



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 131/364 (35%), Gaps = 106/364 (29%)

Query: 91  GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
           G V+ WG          GSS  L      D L PKP+      D     +  I+ G  H 
Sbjct: 221 GDVYVWGEVWTEVLPSEGSSNYLC--SKTDFLIPKPLESDVVLD-----VQQIACGSRHI 273

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
           G  +  G +FT G+   G+LGHG       P  V S    NV  IACG  H+ V+     
Sbjct: 274 GLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA--- 330

Query: 199 GNQVYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
              +Y +G G           GVS    + VS P     L  ++++ ++     SA   +
Sbjct: 331 SGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGP-----LEGLQVLSVACGSWHSALTMS 385

Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G L+T+G G                                         G   HG   
Sbjct: 386 SGKLFTFGDG---------------------------------------TFGSLGHG--- 403

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             +R S   P     ++V  L G + +++A G  HSA +      V +   + T      
Sbjct: 404 --DRESVAYP-----KEVEALSGFRAMKVACGVWHSAAI------VEISGQASTN----- 445

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFT 430
                A +R + TWG G+  +LG G+   ++ P  V   +   F       +V CG   T
Sbjct: 446 -----AMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH------QVACGHSMT 494

Query: 431 YAIS 434
            A++
Sbjct: 495 VALA 498


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTIDVATPSVHEPVLFQTARDPL 3348



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4116

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4102

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4162

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4218 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4316



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4223

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4012

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4070 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4186

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4187 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4242 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4301

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4302 QGKKVNR-----VACGSAHTLAWS 4320



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3067

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3068 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3125 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3184 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3222

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3223 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 3120

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3121 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
            magnipapillata]
          Length = 2284

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 152/325 (46%), Gaps = 29/325 (8%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKV 93
            V++ G G +GQLG G      SP+LL      ++  ++   GG H LAL+S      G+V
Sbjct: 1496 VFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSS-----DGEV 1550

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            FSWG G  G+LGHG    +  PK + FF G    IT+I AG +HS  +  +G L+T G G
Sbjct: 1551 FSWGEGEDGKLGHGNRQTSSQPKRIEFFCGK--IITNICAGGSHSAAIGLNGELYTWGKG 1608

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--QVYGFGSGKRG 211
             +G+LGHGD      P +V +     V  +ACG   +  L   C+ N   V+ +G G  G
Sbjct: 1609 RYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTL---CITNDDNVWSWGDGDYG 1665

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            +LG  +       +P +   L    IV +      S AL+  G LYTWG+      G  +
Sbjct: 1666 KLG--RGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGT 1723

Query: 266  TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
               V  P  + +  +   +  + G  H +V T +GEV   G +  G L D   ++   P 
Sbjct: 1724 EEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPT 1783

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHS 348
                     L   K+ +I+ G+ H+
Sbjct: 1784 LNTF-----LLNKKIDRISCGSAHT 1803



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 168/418 (40%), Gaps = 58/418 (13%)

Query: 27  EEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           E    + V V+ WG     QLG  +     SP L +  S      +A G      +T+  
Sbjct: 551 ENSTNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNK- 609

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
               GK++S G  S G+LG G++  +   P+ VT  +    T   + +G NH   ++  G
Sbjct: 610 ----GKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
             F+ GDG  GQLGHG+  S S P  + +FV K V  I+CG  HS  ++++     +Y +
Sbjct: 666 LAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVEN---KYLYTW 722

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW--- 259
           G G  G+LG   +   ++  P+         +V +S  G R A    ++ +  +++W   
Sbjct: 723 GLGDFGRLGHGDE--ETILQPKFVTHFLGYNVVQVSC-GSRDAQTVCITDDDKVWSWGDG 779

Query: 260 -----GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                GRG +    +         L   +   G    + LT  G V   G      L   
Sbjct: 780 DFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHG 839

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
             +   +P     + V  L G  VI IA GA H   VT                      
Sbjct: 840 TDIHVRQP-----KLVEGLRGKHVIDIAVGALHCLAVT---------------------- 872

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
               ++  + +WG  +HGQLG G T  +   KV NL     N   +  V CGS  + A
Sbjct: 873 ----QDGEVFSWGDNDHGQLGTGETDVK---KVPNLITGLHNHRIKY-VACGSSHSIA 922



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 10/226 (4%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P+ +       ++ +  GG+H  A+      + G+++
Sbjct: 1549 EVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIG-----LNGELY 1603

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V              +G   +  +++   +++ GDG 
Sbjct: 1604 TWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGD 1663

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+ +     K + ++ CG + S+ L K      +Y +G G   +LG
Sbjct: 1664 YGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTK---YGVLYTWGKGDYYRLG 1720

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
               +    V  P +   L +  +  IS         + EG +Y WG
Sbjct: 1721 HGTE--EHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWG 1764



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P ++   S   +  + CG    +ALT       G +++
Sbjct: 1656 VWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTK-----YGVLYT 1710

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P  VT        +T IS G  H    +D G ++  GD   
Sbjct: 1711 WGKGDYYRLGHGTEEHVRRPMMVTAL--FNKIVTSISCGSLHCVVCTDEGEVYCWGDNDE 1768

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +  +P   +  +NK + +I+CG  H++
Sbjct: 1769 GQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTI 1804



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 126/331 (38%), Gaps = 52/331 (15%)

Query: 142  SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLG 199
            +D   +F  G G  GQLG G   + +SP  + S  + N+ +I+   G RH L L  D   
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSD--- 1547

Query: 200  NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             +V+ +G G+ G+LG   +R  S    ++      I I  I A G  SAA+   G LYTW
Sbjct: 1548 GEVFSWGEGEDGKLG-HGNRQTSSQPKRIEFFCGKI-ITNICAGGSHSAAIGLNGELYTW 1605

Query: 260  GRGF-----NSTSDVNCPQSLPSSLSF-----SQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            G+G      +  SD         +L F          G    L +T D  V   G   +G
Sbjct: 1606 GKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYG 1665

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRL- 360
             L          P+      + +L G  ++++  G++ S  +T        GK  + RL 
Sbjct: 1666 KLGRGGSDGCKVPMI-----IEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLG 1720

Query: 361  --------FIISYTPFFPPFFIN---------VIAENRAIMTWGWGEHGQLGLGNTCDQI 403
                      +  T  F     +         V  +   +  WG  + GQLG G    + 
Sbjct: 1721 HGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQ 1780

Query: 404  HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
             P    L     N+     + CGS  T A S
Sbjct: 1781 TP---TLNTFLLNKKID-RISCGSAHTIAWS 1807



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 79/199 (39%), Gaps = 42/199 (21%)

Query: 234  DIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL----GWN 289
            D + V I+ +G   A + A G+      G   +  V  P+ L S    +   +    G  
Sbjct: 1483 DCDTVCITTDG---ALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGR 1539

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H L L+ DGEV   G    G L    R +S++P     +++    G  +  I AG  HSA
Sbjct: 1540 HCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQP-----KRIEFFCGKIITNICAGGSHSA 1594

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                       I  N  + TWG G +G+LG G++ DQ+ PK V 
Sbjct: 1595 A--------------------------IGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVE 1628

Query: 410  LGDEFQNRDTQLEVFCGSG 428
                F      L+V CGSG
Sbjct: 1629 ALQFF----FVLDVACGSG 1643



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 57/254 (22%)

Query: 199  GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHL 256
            G  V+  G G  GQLG+      +V+ P++   +  I I  IS +  G    ALS++G +
Sbjct: 1493 GALVFATGYGNNGQLGLGYSE--TVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEV 1550

Query: 257  YTW--------GRGFNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLM 302
            ++W        G G   TS      S P  + F      +    G +H   +  +GE+  
Sbjct: 1551 FSWGEGEDGKLGHGNRQTS------SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYT 1604

Query: 303  LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
             G   +G L   +     +P     ++V  L    V+ +A G+  +  +           
Sbjct: 1605 WGKGRYGRLGHGDSDDQLKP-----KQVEALQFFFVLDVACGSGDAQTL----------- 1648

Query: 363  ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
                          I  +  + +WG G++G+LG G +     P ++    E  +    ++
Sbjct: 1649 -------------CITNDDNVWSWGDGDYGKLGRGGSDGCKVPMII----EDLSGKGIVK 1691

Query: 423  VFCGSGFTYAISRH 436
            V CGS F+ A++++
Sbjct: 1692 VECGSQFSMALTKY 1705


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 193/439 (43%), Gaps = 79/439 (17%)

Query: 27  EEEEQQVVKVWSWGAGTDGQLGTGRLH-----DELSPQLLNLSSLSSVSMLACGGAHVLA 81
           +EE     ++W WG G     GT +L      D   P+ +    +  V  +ACG  H   
Sbjct: 78  QEEGDVFGELWMWGEGIGDGGGTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHAAL 137

Query: 82  LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
           +T       G+VFSWG  S G+LGHG   D  +P+ +        T+ +++ G  HS  V
Sbjct: 138 VTRQ-----GEVFSWGEESGGRLGHGVDADVAHPQLIDSLASS--TVQYVACGEYHSCAV 190

Query: 142 SDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCL 198
           + SG L+T GDGT  FG LGHG+  SH +P +V   +    V  +ACG  H++++     
Sbjct: 191 TQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTST-- 248

Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-------- 250
             Q++ FG G  G LG   DR +S S+P+    L  ++ +  +     +AA+        
Sbjct: 249 -GQLFSFGDGTFGVLG-HGDR-KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYS 305

Query: 251 ----SAEGHLYTWGRG-FNSTSDVNCPQSL-PSSLS------FSQAALGWNHVLVLTGDG 298
               S  G L+TWG G  N     +  Q L P+ ++      F Q A G +  + LT  G
Sbjct: 306 NAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTG 365

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            +  +G   +G L DP+           L  V  L    + +++ GA H A +T K    
Sbjct: 366 HLYTMGSVSYGQLGDPQATGR-------LPGVLRLGRTLIEEVSCGAYHVAALTSKGD-- 416

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                                   + TWG G +G+LG G+  D+  P +V        RD
Sbjct: 417 ------------------------VCTWGKGANGRLGHGDAEDRDVPSLVEA-----LRD 447

Query: 419 TQL-EVFCGSGFTYAISRH 436
            Q+ +V CGS FT AI  H
Sbjct: 448 KQVKKVSCGSSFTSAICLH 466


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 167/376 (44%), Gaps = 69/376 (18%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V SWGA T GQLG G      SP  + +S L+++  LA GG H LAL S      G V 
Sbjct: 224 AVVSWGANTYGQLGNGTTTTSASP--VGVSGLNNIKSLAAGGNHSLALKSD-----GTVT 276

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV-SDSGCLFTCGDG 153
           +WG  + GQ+G+G   + L P  V+   G    +T +SAG +HS  + S +G ++  G  
Sbjct: 277 AWGYNAYGQVGNGATANVLSPIAVSTLSG----VTAVSAGVSHSHAIGSSNGVIWGWGLN 332

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           T+G LG+    + S+P  +   +   +  +A G +H++ +  D     V+ +GS   GQ+
Sbjct: 333 TYGGLGNNTKVNRSTPGTI--LLTSGLQGVAGGAQHTIYVKGD---GTVWAWGSNTYGQI 387

Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           G      R+  V L  +T       I+ ++A  + S AL+A G ++ WGR      G  S
Sbjct: 388 GDGTPLRRLTPVQLSTLT------GIIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGS 441

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           T++ + P  +P+       A G  H L L  DG V   G +H G L D        P++V
Sbjct: 442 TTNRSLPTQVPNLTGIVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAV 501

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +       KV+ I+AG  HS                            I +N     
Sbjct: 502 HYLE-------KVVAISAGDNHSL--------------------------AIHQNGTAFA 528

Query: 386 WGWGEHGQLGLGNTCD 401
           WG  EHGQL     CD
Sbjct: 529 WGSDEHGQL-----CD 539



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 168/389 (43%), Gaps = 70/389 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN------LSSLSSVSMLACGGAHVLALTSPSSVI 89
           VWSWG   +  LG      +  P  +       LS L+ V  +A G  H LAL S     
Sbjct: 117 VWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKS----- 171

Query: 90  GGKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
            G V+SWG  SSGQLG+G +   +   + V   D        ISAG  HS  +  +G + 
Sbjct: 172 NGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA-----VAISAGAAHSLALRANGAVV 226

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + G  T+GQLG+G   + +SPV VS     N+  +A G  HSL L  D     V  +G  
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSGL--NNIKSLAAGGNHSLALKSD---GTVTAWGYN 281

Query: 209 KRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGR---- 261
             GQ+G   + + +  +++  ++       +  +SA    S A+ S+ G ++ WG     
Sbjct: 282 AYGQVGNGATANVLSPIAVSTLS------GVTAVSAGVSHSHAIGSSNGVIWGWGLNTYG 335

Query: 262 --GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             G N+  + + P ++  +      A G  H + + GDG V   G + +G + D   +  
Sbjct: 336 GLGNNTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRR 395

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+     ++S L G+  I +AAGA HS                            +A 
Sbjct: 396 LTPV-----QLSTLTGI--IAVAAGANHSLA--------------------------LAA 422

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           N  +  WG   HGQLG G+T ++  P  V
Sbjct: 423 NGTVFAWGRNNHGQLGDGSTTNRSLPTQV 451



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 153/380 (40%), Gaps = 64/380 (16%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           +Q   VW+ G    G+LG G   D LSP  + +S+L+ V  +A G  H LAL S      
Sbjct: 12  RQDGTVWASGYNYHGELGNGTATDSLSP--VQVSNLTGVISVAAGYYHSLALKSD----- 64

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++WG  + G LG         P  V    G    +  I+A +  S  +   G +++ 
Sbjct: 65  GTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTG----VIAIAADYYQSFALKSDGTVWSW 120

Query: 151 GDGTFGQLGHGDYRSHSSPVKV-SSFVN-----KNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G      LG+    +   P +V  SF        +V  IA G  H+L L  +     V+ 
Sbjct: 121 GYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSN---GTVWS 177

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           +G    GQLG      +S ++  V +     + V ISA    S AL A G + +WG    
Sbjct: 178 WGLNSSGQLGNGTLATQSAAVQAVNL----TDAVAISAGAAHSLALRANGAVVSWGANTY 233

Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              G  +T+    P  +    +    A G NH L L  DG V   G + +G + +    +
Sbjct: 234 GQLGNGTTTTSASPVGVSGLNNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATAN 293

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P++     VS L GV    ++AG  HS                          + I 
Sbjct: 294 VLSPIA-----VSTLSGVTA--VSAGVSHS--------------------------HAIG 320

Query: 379 ENRAIMTWGWGEHGQLGLGN 398
            +  ++ WGWG +   GLGN
Sbjct: 321 SSNGVI-WGWGLNTYGGLGN 339



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 111/278 (39%), Gaps = 65/278 (23%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG    GQLG G   +   P    + +L+ +  LA G  H LAL        G V++
Sbjct: 426 VFAWGRNNHGQLGDGSTTNRSLPT--QVPNLTGIVALAAGATHSLALR-----FDGTVYA 478

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFF---------DGHRYTITH---------------- 130
           WGR   GQLG     D L P  V +          D H   I                  
Sbjct: 479 WGRNHLGQLGDETCTDRLSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLC 538

Query: 131 ------------------------ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
                                   I+AG NH+  +  +G  + CGD  +GQLG G     
Sbjct: 539 DSGSGSGRFSPLISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDK 598

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S+PV +++    N  ++A G   S  L  +     V  +G    GQLG +    R+   P
Sbjct: 599 SAPVPITTLT--NAARLAAGGNTSAALTTN---GTVSTWGLNSSGQLGDNTTASRTTIAP 653

Query: 227 QVTIGLHDIEIV-GISANGDRSAALSA---EGHLYTWG 260
            +      +E+  G+++ G  +A L+A   +G++++WG
Sbjct: 654 VLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWG 691



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 136/335 (40%), Gaps = 66/335 (19%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++ G    G+LG+G   D+L P  V+   G    +  ++AG+ HS  +   G ++  
Sbjct: 15  GTVWASGYNYHGELGNGTATDSLSPVQVSNLTG----VISVAAGYYHSLALKSDGTVWAW 70

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G  T+G LG     + + PV+V +     V  IA     S  L  D     V+ +G    
Sbjct: 71  GLNTYGNLGDNTTTTRTKPVQVLNLT--GVIAIAADYYQSFALKSD---GTVWSWGYNGN 125

Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDI-----EIVGISANGDRSAALSAEGHLYTWGRGFN 264
             LG +    +   LP QV      I     ++V I+A    + AL + G +++W  G N
Sbjct: 126 SALGNASPATQ--KLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSW--GLN 181

Query: 265 STSDVN----CPQS-------LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           S+  +       QS       L  +++ S  A    H L L  +G V+  G + +G L +
Sbjct: 182 SSGQLGNGTLATQSAAVQAVNLTDAVAISAGAA---HSLALRANGAVVSWGANTYGQLGN 238

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
               +S  P+      VS L+ +K   +AAG  HS                         
Sbjct: 239 GTTTTSASPVG-----VSGLNNIK--SLAAGGNHSL------------------------ 267

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              +  +  +  WG+  +GQ+G G T + + P  V
Sbjct: 268 --ALKSDGTVTAWGYNAYGQVGNGATANVLSPIAV 300



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 120/289 (41%), Gaps = 56/289 (19%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           +  G +H+  V   G ++  G    G+LG+G      SPV+VS+     V  +A G  HS
Sbjct: 1   MEGGAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLT--GVISVAAGYYHS 58

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           L L  D     V+ +G    G LG +    R+  + QV   L+   ++ I+A+  +S AL
Sbjct: 59  LALKSD---GTVWAWGLNTYGNLGDNTTTTRTKPV-QV---LNLTGVIAIAADYYQSFAL 111

Query: 251 SAEGHLYTWGRGFNSTSDVNCP--QSLPSSLSFS------------QAALGWNHVLVLTG 296
            ++G +++WG   NS      P  Q LP+ +  S              A G +H L L  
Sbjct: 112 KSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKS 171

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
           +G V   G +  G L +    +     S A++ V+  D V    I+AGA HS        
Sbjct: 172 NGTVWSWGLNSSGQLGNGTLATQ----SAAVQAVNLTDAVA---ISAGAAHSL------- 217

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                               +  N A+++WG   +GQLG G T     P
Sbjct: 218 -------------------ALRANGAVVSWGANTYGQLGNGTTTTSASP 247



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 21/146 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            W+ G    GQLG G   D+ +P  + +++L++ + LA GG    ALT+      G V +
Sbjct: 579 AWACGDNLYGQLGDGTTTDKSAP--VPITTLTNAARLAAGGNTSAALTT-----NGTVST 631

Query: 96  WGRGSSGQLGH---------GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           WG  SSGQLG            ++  +YP  V  F G    +  + AG  H   V   G 
Sbjct: 632 WGLNSSGQLGDNTTASRTTIAPVLRTVYPT-VEVFSG----VASLGAGTAHLTAVKTDGY 686

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKV 172
           + + G    GQ+G G   +   P   
Sbjct: 687 VHSWGLNDSGQIGDGTLVNRPLPTAA 712


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 177/407 (43%), Gaps = 67/407 (16%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WGA   GQLG G       P  + L  L+ V+ LA GG H LA+     +  G V +WG
Sbjct: 368 AWGANVSGQLGDGTTTQRTLP--VGLPGLTGVAALAAGGYHSLAV-----LANGTVRAWG 420

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             + GQLG G       P  V    G    +  ++AG++HS  +   G +   G+   GQ
Sbjct: 421 HNTYGQLGDGSTAQRTAPVVVPALTG----VVSLTAGYDHSLALLSDGTVRAWGNNASGQ 476

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACG-MRHSLVLLKDCLGNQVYGFGSGKRGQLG-- 214
           LG G      +PV+VS   N  V  ++ G + H+L LL D     V  +G    GQLG  
Sbjct: 477 LGDGTTNQRGTPVQVSGLTN--VVALSGGKLYHALALLSD---GTVRAWGYNMNGQLGDG 531

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNST 266
            + +R   V++  +T       +V I+A GD S AL + G + +WG        R +++ 
Sbjct: 532 STSNRWTPVAVSGLT------NVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTY 585

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           S    P+++P   +    A G NHVL L  DG V   G +  G L D   V    P+ V 
Sbjct: 586 SP--TPKAVPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQV- 642

Query: 327 LEKVSNLDGVKVIQIAAGAEHS-------AVVTGKFHWVRLF----IISY--TPFFPPFF 373
              ++N     V+ IA G +HS        V    +++ R        +Y  TP   P  
Sbjct: 643 -PGLTN-----VVAIATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGL 696

Query: 374 INVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            NV+A             + A+  WG   HG+LG G+T     P  V
Sbjct: 697 TNVVAVTAGGNQSLALLSSGAVHAWGDNSHGELGNGSTLTPPAPVAV 743



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 156/380 (41%), Gaps = 59/380 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG  T GQLG G      SP  +    LS V  +A G  H LAL S      G V 
Sbjct: 115 TVRAWGNNTYGQLGDGTTPHRASPGAV--PGLSGVVAIAAGNNHALALLSD-----GTVR 167

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQLG G       P  V    G    +  I+AG NHS  V   G +   G+ T
Sbjct: 168 AWGYNAYGQLGDGTTTQRRTPVAVLGLTG----VVAIAAGENHSLAVLADGTVRAWGNNT 223

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G     +SPV VSS     V  IA G  HSL +L D    + +G+ +  R   G
Sbjct: 224 YGRLGDGTTTQRTSPVLVSSLT--GVTAIAAGANHSLAVLADGT-VRAWGYNASGRLGDG 280

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
            +  R   V++P +T       +  ISA G  S AL A+G    WG       G  + S+
Sbjct: 281 TTTQRATPVAVPGLT------GVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSN 334

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  + S    +  + G NH L L  DG     G +  G L D    ++ R L V L 
Sbjct: 335 RTSPVLVSSLTGVTALSAGGNHSLALLADGTARAWGANVSGQLGD--GTTTQRTLPVGLP 392

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
            ++      V  +AAG  HS  V                            N  +  WG 
Sbjct: 393 GLTG-----VAALAAGGYHSLAVL--------------------------ANGTVRAWGH 421

Query: 389 GEHGQLGLGNTCDQIHPKVV 408
             +GQLG G+T  +  P VV
Sbjct: 422 NTYGQLGDGSTAQRTAPVVV 441



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 158/384 (41%), Gaps = 64/384 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG  T G+LG G      SP L+  SSL+ V+ +A G  H LA+     +  G V 
Sbjct: 215 TVRAWGNNTYGRLGDGTTTQRTSPVLV--SSLTGVTAIAAGANHSLAV-----LADGTVR 267

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  +SG+LG G       P  V    G    +T ISAG  HS  +   G     G   
Sbjct: 268 AWGYNASGRLGDGTTTQRATPVAVPGLTG----VTEISAGGGHSLALLADGTARAWGSNV 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   + +SPV VSS     V  ++ G  HSL LL D        +G+   GQLG
Sbjct: 324 SGQLGDGTVSNRTSPVLVSSLTG--VTALSAGGNHSLALLAD---GTARAWGANVSGQLG 378

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
              +  R   V LP +T       +  ++A G  S A+ A G +  WG       G  ST
Sbjct: 379 DGTTTQRTLPVGLPGLT------GVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGST 432

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +    P  +P+         G++H L L  DG V   G +  G L D        P+ V+
Sbjct: 433 AQRTAPVVVPALTGVVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVS 492

Query: 327 -LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
            L  V  L G K+                +H + L                   +  +  
Sbjct: 493 GLTNVVALSGGKL----------------YHALALL-----------------SDGTVRA 519

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVN 409
           WG+  +GQLG G+T ++  P  V+
Sbjct: 520 WGYNMNGQLGDGSTSNRWTPVAVS 543



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 138/344 (40%), Gaps = 57/344 (16%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           LA G AH L L +P     G V +WG  +SGQLG G       P  V    G       +
Sbjct: 50  LASGKAHSL-LATPD----GTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAG----AVAV 100

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           SAG  +S  +   G +   G+ T+GQLG G     +SP  V       V  IA G  H+L
Sbjct: 101 SAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGL--SGVVAIAAGNNHAL 158

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            LL D     V  +G    GQLG      R    P   +GL    +V I+A  + S A+ 
Sbjct: 159 ALLSD---GTVRAWGYNAYGQLGDGTTTQRRT--PVAVLGL--TGVVAIAAGENHSLAVL 211

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           A+G +  WG       G  +T+    P  + S    +  A G NH L +  DG V   G 
Sbjct: 212 ADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGY 271

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
           +  G L D        P++     V  L GV   +I+AG  HS                 
Sbjct: 272 NASGRLGDGTTTQRATPVA-----VPGLTGVT--EISAGGGHS----------------- 307

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                   + ++A+  A   WG    GQLG G   ++  P +V+
Sbjct: 308 --------LALLADGTA-RAWGSNVSGQLGDGTVSNRTSPVLVS 342



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V++WG    GQLG G      +P  + +  L++V  +A G  H LAL +      G V+
Sbjct: 616 TVYAWGRNDFGQLGDGTTVQRNTP--VQVPGLTNVVAIATGWDHSLALRAD-----GTVY 668

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG   + QLG G   +    P PV         +  ++AG N S  +  SG +   GD 
Sbjct: 669 AWGYNYARQLGDGSTANYRQTPAPVPGLT----NVVAVTAGGNQSLALLSSGAVHAWGDN 724

Query: 154 TFGQLGHGDYRSHSSPVKVSSF 175
           + G+LG+G   +  +PV V+  
Sbjct: 725 SHGELGNGSTLTPPAPVAVTGL 746


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 175/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   ++S+V  +ACG  H   +T+      G ++
Sbjct: 295 EVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA-----SGDLY 349

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            WG GS  +G LGHG  V    PK V+   +G    +  ++ G  HS     SG LFT G
Sbjct: 350 DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG--LQVLSVACGSWHSALTMSSGKLFTFG 407

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  S + P +V +       ++ACG+ HS  +++       + +  +++ 
Sbjct: 408 DGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFT 467

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GD+ A L              
Sbjct: 468 WGDGDKNRLG----------------------------HGDKEAKLVP------------ 487

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C Q+L    +F Q A G +  + L   G V  +G S++G L +P +    +P  
Sbjct: 488 -----TCVQALVDH-NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNP-KADGKQPCM 540

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V       L    V +I+ G+ H A +T +                            + 
Sbjct: 541 VQ----DKLGNELVEEISCGSNHVAALTSRSE--------------------------VY 570

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V   D  ++R  +  + CGS FT  I  H
Sbjct: 571 TWGMGANGRLGHGSVEDKKKPTLV---DALKDRHVK-SISCGSNFTTCICIH 618



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G    +L P  +      +   +ACG +  +AL +      G VF
Sbjct: 464 KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALAT-----SGHVF 518

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  ++GQLG+ +  D   P  V    G+   +  IS G NH   ++    ++T G G 
Sbjct: 519 TMGSSNNGQLGNPK-ADGKQPCMVQDKLGNEL-VEEISCGSNHVAALTSRSEVYTWGMGA 576

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
            G+LGHG       P  V +  +++V  I+CG   +  +   C+   V G      SG R
Sbjct: 577 NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI---CIHKWVSGADQSVCSGCR 633

Query: 211 GQLGVSKDR 219
              G ++ R
Sbjct: 634 QPFGFTRKR 642



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 130/361 (36%), Gaps = 100/361 (27%)

Query: 91  GKVFSWGR---------GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
           G V+ WG          GSS  L      D L PKP+         +  I+ G  H G  
Sbjct: 235 GDVYVWGEVWTEVLPSEGSSNYLC--SKTDFLIPKPLE--SDVVLDVQQIACGSRHIGLT 290

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           +  G +FT G+   G+LGHG       P  V S    NV  IACG  H+ V+        
Sbjct: 291 TRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA---SGD 347

Query: 202 VYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           +Y +G G           GVS    + VS P     L  ++++ ++     SA   + G 
Sbjct: 348 LYDWGDGSYNAGLLGHGTGVSHWLPKRVSGP-----LEGLQVLSVACGSWHSALTMSSGK 402

Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           L+T+G G                                         G   HG     +
Sbjct: 403 LFTFGDG---------------------------------------TFGSLGHG-----D 418

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
           R S   P     ++V  L G + +++A G  HSA +      V +   + T         
Sbjct: 419 RESVAYP-----KEVEALSGFRAMKVACGVWHSAAI------VEISGQASTN-------- 459

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAI 433
             A +R + TWG G+  +LG G+   ++ P  V   +   F       +V CG   T A+
Sbjct: 460 --AMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH------QVACGHSMTVAL 511

Query: 434 S 434
           +
Sbjct: 512 A 512


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 156/328 (47%), Gaps = 42/328 (12%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G+S L     P   +    QQ++              V + G G+ G+LG G   D+L
Sbjct: 3198 ETGRSLLTPTVTPSFSQA---QQIICGQNCTFVIQANGTVQACGEGSYGRLGQGN-SDDL 3253

Query: 57   SPQLLNLSSLSS--VSML--ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
              QL  +S+L    V+ L  +CG   H +ALT       G+VFSWG G  G+LGHG    
Sbjct: 3254 H-QLTIISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGNSDR 3307

Query: 112  ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
               P+ +    G    I  ++ G+ HS  VS  G LFT G+G +G+LG G+  +   P +
Sbjct: 3308 QRRPRQIEALQGEE--IIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPER 3365

Query: 172  VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
            V++   + V Q+ CG+ H+L +  D  GN V+ FG G  G+LG+     +S   PQ    
Sbjct: 3366 VTALEGQMVGQVGCGLNHTLAVSAD--GNTVWSFGDGDYGKLGLGNSTAKST--PQRVDP 3421

Query: 232  LHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSF--SQ 283
            L  I +  +      S AL+ +G ++T+G+        + + + N PQ +P+  +F    
Sbjct: 3422 LCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVED 3481

Query: 284  AALGWNHVLVLTGDGEVLMLGGSHHGML 311
              +G  H L LT  GEV   G +  G L
Sbjct: 3482 VVVGAEHSLALTSTGEVWAWGSNGDGQL 3509



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 173/397 (43%), Gaps = 44/397 (11%)

Query: 35   KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            + + WG G  GQL  TGR    L+P +    S S    + CG      + +      G V
Sbjct: 3184 EAYMWGGGRHGQLAETGR--SLLTPTVT--PSFSQAQQIICGQNCTFVIQA-----NGTV 3234

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGD 152
             + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GD
Sbjct: 3235 QACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGD 3294

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LGHG+      P ++ +   + + Q+ACG +HS V+  D    +++ FG+G  G+
Sbjct: 3295 GDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSAD---GKLFTFGNGDYGR 3351

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWGRGF-------N 264
            LG+     + +  P+    L    +  +    + + A+SA+G+ ++++G G        N
Sbjct: 3352 LGLGNTSNKKI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGN 3409

Query: 265  STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST-- 320
            ST+  + PQ +     +   +   G    + LT DG V   G     ++  PE  S    
Sbjct: 3410 STAK-STPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFG--QERLIGQPESRSRNHN 3466

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH-WV-------RLFIISYTPFFPPF 372
            RP     ++V  L+   V  +  GAEHS  +T     W        +L I        P 
Sbjct: 3467 RP-----QQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPC 3521

Query: 373  FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             +  +        WG    GQLG+G+T  +  P +V 
Sbjct: 3522 LVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVT 3558



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 153/363 (42%), Gaps = 57/363 (15%)

Query: 88   VIGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++GG+   + WG G  GQL        L P     F   +  I     G N +  +  +G
Sbjct: 3178 MLGGRCEAYMWGGGRHGQLAETGR-SLLTPTVTPSFSQAQQII----CGQNCTFVIQANG 3232

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGNQV 202
             +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     +V
Sbjct: 3233 TVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTE---SGEV 3289

Query: 203  YGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            + +G G  G+LG  + DR R    P+    L   EI+ ++     SA +SA+G L+T+G 
Sbjct: 3290 FSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGN 3346

Query: 262  ------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGMLS 312
                  G  +TS+   P+ + +       Q   G NH L ++ DG  V   G   +G L 
Sbjct: 3347 GDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLG 3406

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK-----FHWVRLF------ 361
                 + + P     ++V  L G+ V ++  G + S  +T       F   RL       
Sbjct: 3407 LGNSTAKSTP-----QRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESR 3461

Query: 362  -----IISYTPFFPPFFINVI---AENRAIMT-----WGWGEH--GQLGLGNTCDQIHPK 406
                      P    FF+  +   AE+   +T     W WG +  GQLG+G+T  +  P 
Sbjct: 3462 SRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPC 3521

Query: 407  VVN 409
            +V 
Sbjct: 3522 LVT 3524



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 63/301 (20%)

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G G  GQL     RS  +P    SF      QI CG   + V+  +     V   G G  
Sbjct: 3189 GGGRHGQLAETG-RSLLTPTVTPSF--SQAQQIICGQNCTFVIQAN---GTVQACGEGSY 3242

Query: 211  GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----N 264
            G+LG  + D +  +++     G    ++V    +   S AL+  G +++WG G      +
Sbjct: 3243 GRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3302

Query: 265  STSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              SD    Q  P  +         Q A G+ H  V++ DG++   G   +G L      +
Sbjct: 3303 GNSDR---QRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSN 3359

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
               P     E+V+ L+G  V Q+  G  H+  V+                         A
Sbjct: 3360 KKIP-----ERVTALEGQMVGQVGCGLNHTLAVS-------------------------A 3389

Query: 379  ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN----LGDEFQNRDTQLEVFCGSGFTYAIS 434
            +   + ++G G++G+LGLGN+  +  P+ V+    +G +        +V CG+ F+ A++
Sbjct: 3390 DGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVK--------KVCCGTQFSVALT 3441

Query: 435  R 435
            +
Sbjct: 3442 K 3442



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 50/122 (40%), Gaps = 25/122 (20%)

Query: 69   VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
            V  +  G  H LALTS      G+V++WG    GQLG G+      P  VT   G     
Sbjct: 3479 VEDVVVGAEHSLALTS-----TGEVWAWGSNGDGQLGIGDTNARREPCLVTALQGK---- 3529

Query: 129  THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
             ++   W  +G                GQLG GD  +   P  V+    KNV QI+ G  
Sbjct: 3530 -NVRQVWGSNGD---------------GQLGIGDTNARREPCLVTDLQGKNVRQISAGRN 3573

Query: 189  HS 190
            HS
Sbjct: 3574 HS 3575



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 102/249 (40%), Gaps = 59/249 (23%)

Query: 201  QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVG------ISANGDRSAALSA 252
            + Y +G G+ GQL  +    RS+  P VT      +  I G      I ANG   A    
Sbjct: 3184 EAYMWGGGRHGQLAETG---RSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQAC--G 3238

Query: 253  EGHLYTWGRGFNSTSDVNCPQSLPSSLS-FSQAALGWN-----HVLVLTGDGEVLMLGGS 306
            EG   ++GR     SD     ++ S+L  F    L  +     H + LT  GEV   G  
Sbjct: 3239 EG---SYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3295

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             +G L         RP      ++  L G ++IQ+A G +HSAVV+              
Sbjct: 3296 DYGKLGHGNSDRQRRP-----RQIEALQGEEIIQMACGFKHSAVVSA------------- 3337

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFC 425
                         +  + T+G G++G+LGLGNT ++  P +V  L  +        +V C
Sbjct: 3338 -------------DGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVG-----QVGC 3379

Query: 426  GSGFTYAIS 434
            G   T A+S
Sbjct: 3380 GLNHTLAVS 3388



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 43/105 (40%), Gaps = 25/105 (23%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +VW+WG+  DGQLG G  +    P L+           A  G +V  +            
Sbjct: 3497 EVWAWGSNGDGQLGIGDTNARREPCLVT----------ALQGKNVRQV------------ 3534

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
             WG    GQLG G+      P  VT   G    +  ISAG NHSG
Sbjct: 3535 -WGSNGDGQLGIGDTNARREPCLVTDLQGK--NVRQISAGRNHSG 3576


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
           KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 605 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 658

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 659 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 716

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
           G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 717 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 773

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
             G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 774 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 831

Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
             SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 832 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 891

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
           +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 892 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 940



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 1706

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 1707 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 1766

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 1767 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 1823

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 1824 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1867



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 1640 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 1692

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 1693 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 1752

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 1753 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 1807

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 1808 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1867

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 1868 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 1906



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 177/437 (40%), Gaps = 57/437 (13%)

Query: 7   EETEKGKS-ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
           EE EKG S +LI      +E     +   KV+ WG     QLG  +      P      S
Sbjct: 526 EEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 583

Query: 66  LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGH 124
             +V  +A G   + A+T     + GKV++ G  ++G+LG G     +  P+ +T    +
Sbjct: 584 ALNVVQVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSY 638

Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
                 + +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K +  IA
Sbjct: 639 VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 698

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISAN 243
           CG  HS  L       ++Y +G G+ G+LG   +  +    + +V +G H +  V   + 
Sbjct: 699 CGSSHSAALTS---SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSR 754

Query: 244 GDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
             ++ AL+ EG +++WG G         +   N PQ++   +     Q   G    L LT
Sbjct: 755 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 814

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
             G V   G   +  L     V   +P     + V  L G K++ +A GA H   VT   
Sbjct: 815 KSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVT--- 866

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                                  ++  +  WG  +HGQ G G T     P +V  G E Q
Sbjct: 867 -----------------------DSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ 902

Query: 416 NRDTQLEVFCGSGFTYA 432
                  V CGS  + A
Sbjct: 903 K---ITRVACGSSHSVA 916



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 1759 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 1813

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 1814 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 1871

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 1872 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1907



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 1602

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 1603 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 1659

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 1660 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 1716

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 1717 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 1776

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 1777 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 1831

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 1832 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 1891

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 1892 QGKKVNR-----VACGSAHTLAWS 1910



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 1862 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 1920


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2708 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2761

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2762 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2819

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2820 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2876

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2877 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2934

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2935 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 2994

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 2995 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3043



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3809

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3810 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3869

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3870 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3926

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3927 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3970



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3743 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3795

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 3796 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3855

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 3856 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3910

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3911 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3970

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 3971 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4009



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 139/349 (39%), Gaps = 75/349 (21%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 435 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 489

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 490 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 549

Query: 170 VKVSSFVNKNVHQIACG--------------MRHSL----VLLKDCLGNQVYGFGSGKRG 211
           + V+      V  +ACG               R S+    VL   C+   V  F   +  
Sbjct: 550 MLVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVESF---RYN 606

Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
           QLGV  + R R    PQ  +        G+     R   L     ++  GR         
Sbjct: 607 QLGVGCRCRQRGWEPPQEDLKF----FYGVLT---RDVMLREGQIVFEAGR--------- 650

Query: 271 CPQSLPSSLSFSQAALGW----------------------NHVLVLTGDGEVLMLGGSHH 308
            P  +P+ +S  + ALG+                       H L LT D EV   G +  
Sbjct: 651 -PGCVPTPVSSQKQALGYIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 709

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
               D  RV+   P ++       LD   ++ I  G   S   +    W
Sbjct: 710 CQHFDTLRVTKPEPAALP-----GLDAKHIMGITCGPAQSCAWSSCSEW 753



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3862 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3916

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 3917 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 3974

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 3975 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4010



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3705

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3706 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3762

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3763 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3819

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 3820 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3879

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 3880 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3934

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 3935 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 3994

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 3995 QGKKVNR-----VACGSAHTLAWS 4013



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2653 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2710

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 2711 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2770

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 2771 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 2815

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 2816 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 2853

Query: 425  CGS 427
            CGS
Sbjct: 2854 CGS 2856



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 36/206 (17%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 383 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 431

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 432 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 487

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 488 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 546

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA 345
             P+ VA      L G+KVI +A G+
Sbjct: 547 AIPMLVA-----GLKGLKVIDVACGS 567



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 470 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 524

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
           G++++WGRG+ G+LGHG   D   P  V    G
Sbjct: 525 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG 557



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 59/316 (18%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V+ +AC     L L+       G+V++    S          D L P+ V          
Sbjct: 408 VTQIACAEKRFLILSR-----NGRVYTQAYNS----------DTLAPQLVQGLASRNIVK 452

Query: 129 THISAGWNHSGFVSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQ 182
               +  +H   ++ +G +++  CGDG  G+LGHGD      P  +S+F      K+V  
Sbjct: 453 IAAHSDGHHYLALAATGEVYSWGCGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVH 510

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
           IACG  +S  +  +    ++Y +G G  G+LG   S+D     ++P +  GL  ++++ +
Sbjct: 511 IACGSTYSAAITAE---GELYTWGRGNYGRLGHGSSEDE----AIPMLVAGLKGLKVIDV 563

Query: 241 SA-NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG-------WNH-- 290
           +  +GD       E         + S   + C   +  S  ++Q  +G       W    
Sbjct: 564 ACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVESFRYNQLGVGCRCRQRGWEPPQ 623

Query: 291 --------VL---VLTGDGEVLMLGGSHHGMLSDPERVSSTRPL--SVALEKVSNL-DGV 336
                   VL   V+  +G+++   G   G +  P  VSS +     +     S+L  G 
Sbjct: 624 EDLKFFYGVLTRDVMLREGQIVFEAG-RPGCVPTP--VSSQKQALGYIVCGGCSSLGPGK 680

Query: 337 KVIQIAAGAEHSAVVT 352
           KVI +AAG+ H   +T
Sbjct: 681 KVIDVAAGSTHCLALT 696



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 3965 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4023


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 180/438 (41%), Gaps = 60/438 (13%)

Query: 1   MVAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL 60
           MVA ++  T  G + ++    P          +    +WG   + QLG G   +  +P  
Sbjct: 31  MVAIVLGVTSVGAAPVLAQGVPSAAAGPPGTGL----AWGDNAESQLGDGTTTNRSTPVT 86

Query: 61  LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF 120
           ++L + ++++ +A G  H LA+TS      G V +WG  SSGQLG G       P  V  
Sbjct: 87  VDLPADTTITAVAAGQGHSLAVTS-----AGTVLAWGANSSGQLGDGTTTPRSTPVAVDL 141

Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKN 179
             G   T+T ++AG  HS  V+ +G +   G    GQL  G   ++SS P+ V       
Sbjct: 142 PAG--TTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTT 199

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
           V  +A G  HSL L        V  +G+   GQLG      RS  +  V +         
Sbjct: 200 VTAVAAGNAHSLALTS---AGTVLAWGANSSGQLGDGTTTPRSTPV-AVDLPAGTTISTI 255

Query: 240 ISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQS--LPSSLSFSQAALGWNHV 291
            +++   S A+++ G +  WG  F       + ++ + P +  LP+  + +  A G  H 
Sbjct: 256 AASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHS 315

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           L +T  G +L  GG+  G L D    SS+ P++V L       G  V  +A GA HS  +
Sbjct: 316 LAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPA-----GTTVTAVAGGAGHSLAL 370

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
           T                              ++ WG+   GQLG G T ++  P   +L 
Sbjct: 371 T--------------------------STGTMLAWGFNTSGQLGDGTTSNRSTPIATDL- 403

Query: 412 DEFQNRDTQLEVFCGSGF 429
                 DT +    G  F
Sbjct: 404 ----PADTTITAIAGGSF 417



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 143/331 (43%), Gaps = 35/331 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WGA + GQLG G      +P  ++L + ++V+ +A G  H LA+TS      G V 
Sbjct: 113 TVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTS-----TGTVL 167

Query: 95  SWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG   +GQL  G    ++  P  V    G   T+T ++AG  HS  ++ +G +   G  
Sbjct: 168 AWGLNVTGQLYDGTTTTNSSTPIVVDLPAG--TTVTAVAAGNAHSLALTSAGTVLAWGAN 225

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G     S+PV V            A    HSL +        +  +G+   GQ
Sbjct: 226 SSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTST---GTMLAWGANFTGQ 282

Query: 213 LG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
           LG     ++    +V LP  T       +  ++     S A+++ G +  WG       G
Sbjct: 283 LGDGTITNRSTPVAVDLPAGT------TVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLG 336

Query: 263 FNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
             ST+  + P +  LP+  + +  A G  H L LT  G +L  G +  G L D    + +
Sbjct: 337 DGSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRS 396

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            P++  L          +  IA G+ HS  V
Sbjct: 397 TPIATDLPA-----DTTITAIAGGSFHSLAV 422



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 7/160 (4%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WGA   GQLG G + +  +P  ++L + ++V+ +A G  H LA+TS      G + +WG
Sbjct: 274 AWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTS-----TGTMLAWG 328

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
              SGQLG G    +  P  V    G   T+T ++ G  HS  ++ +G +   G  T GQ
Sbjct: 329 GNGSGQLGDGSTTSSSTPVAVDLPAG--TTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQ 386

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           LG G   + S+P+      +  +  IA G  HSL ++   
Sbjct: 387 LGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAVVPSA 426


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3017 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3070

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3071 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3128

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3129 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3185

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3186 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3243

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3244 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3303

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3304 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3352



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 426 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 480

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 597

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 598 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 657

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 658 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 712

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 713 ACGPAQSFAWSSCSEW 728



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4118

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4119 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4052 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4104

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4105 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4164

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4219

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4220 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4318



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 461 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 515

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 575

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 576 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 632

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 633 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4225

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4319



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4014

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4128

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4129 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4189 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4244 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4303

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4304 QGKKVNR-----VACGSAHTLAWS 4322



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 374 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 422

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 423 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 478

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 479 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 537

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 538 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 568

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 569 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 620



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2962 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3019

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3020 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3079

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3080 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 3124

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3125 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3162

Query: 425  CGS 427
            CGS
Sbjct: 3163 CGS 3165



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4332


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 169/380 (44%), Gaps = 60/380 (15%)

Query: 10   EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
            E G++ ++  A P   +    QQV+              V + G G+ G+LG G   D  
Sbjct: 2637 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 2691

Query: 57   SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
               L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG 
Sbjct: 2692 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 2743

Query: 109  MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                  P+ +    G    +  +S G+ HS  V+  G LFT G+G +G+LG G+  +   
Sbjct: 2744 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 2801

Query: 169  PVKVSSFVNKNVHQ-------IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
            P +V++     + Q       +ACG+ H+L +  D  G+ V+ FG G  G+LG+     +
Sbjct: 2802 PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTD--GSMVWAFGDGDYGKLGLGNSTAK 2859

Query: 222  SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSL 275
            S   PQ    L  I I  ++     S AL+ +GH+YT+G+            + N PQ +
Sbjct: 2860 SS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 2917

Query: 276  P--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
            P  + +     A+G  H L L   G+V   G +  G L          P  V +     L
Sbjct: 2918 PVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----L 2972

Query: 334  DGVKVIQIAAGAEHSAVVTG 353
             G  + QI+AG  HSA  T 
Sbjct: 2973 QGKNIRQISAGRCHSAAWTA 2992



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 165/393 (41%), Gaps = 63/393 (16%)

Query: 36   VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+ WGAG  GQL   GR  + + P      S S    + CG      + +      G V 
Sbjct: 2624 VFLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 2674

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
            + G GS G+LG G   D      ++   G   T    S G + HS  +++SG +F+ GDG
Sbjct: 2675 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2734

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LGHG+      P ++ +   + V Q++CG +HS V+  D    +++ FG+G  G+L
Sbjct: 2735 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 2791

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEI-------VGISANGDRSAALSAEGHLY------TWG 260
            G+     +   LP+    L   +I         ++   + + A+S +G +        +G
Sbjct: 2792 GLGNTSNK--KLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYG 2849

Query: 261  R-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            + G  +++  + PQ +     +   + A G    + LT DG V   G      L +    
Sbjct: 2850 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 2909

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
            +  RP     ++V  L GV +  +A GAEH+                            +
Sbjct: 2910 NHNRP-----QQVPVLAGVVIEDVAVGAEHTL--------------------------AL 2938

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            A    +  WG    GQLGLG+T     P +V +
Sbjct: 2939 ASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 2971



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 34/148 (22%)

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H + LT  GEV   G   +G L         RP      ++  L G +V+Q++ G +HSA
Sbjct: 2718 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 2772

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            VVT                           +  + T+G G++G+LGLGNT ++  P+ V 
Sbjct: 2773 VVTS--------------------------DGKLFTFGNGDYGRLGLGNTSNKKLPERVT 2806

Query: 410  LGDEF---QNRDTQLEVFCGSGFTYAIS 434
              + +   Q  +    V CG   T A+S
Sbjct: 2807 ALEGYQIGQAWNKSYSVACGLNHTLAVS 2834


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4144

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4145 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4204

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4205 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4261

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4262 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4305



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4078 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4130

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4131 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4190

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4191 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4245

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4246 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4305

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4306 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4344



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4197 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4251

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4252 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4309

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4310 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4345



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4040

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4041 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4097

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4098 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4154

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4155 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4214

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4215 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4269

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4270 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4329

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4330 QGKKVNR-----VACGSAHTLAWS 4348



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4300 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4358


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3351



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 29/331 (8%)

Query: 54  DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+ +L+S + V + A   G H LAL++      G+VFSWG G  G+LGHG+ V 
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  R++   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           A G   S   +    W   +R+ F++   P 
Sbjct: 768 ACGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 798



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G +F
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLF 4118

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+       G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 4052 GGKHCLALS-----FEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4104

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G LFT G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 4105 GAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4164

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4219

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4220 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4318



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
           +V+SWG G  G+LG G       P+++  S+LS       V  +ACG  +  A+T+    
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + ++ ++ CG + S+ L KD    QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 685

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4225

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4014

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L       +VY +G  
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL---SFEGEVYSWGEA 4071

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L  IE+V I+A G  SA ++A G L+TWG+      
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4189 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4244 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4303

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4304 QGKKINR-----VACGSAHTLAWS 4322



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 68/298 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
           +G +G   Y + S P++     N  V Q+AC  +  L+L ++    +VY   + S   G 
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVMQVACAEKRFLILSRN---GRVYTQAYNSDTLG- 484

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
                        PQ+   L    IV I+A+ D     ALSA G +++WG       G  
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ + S+LS  QA       A G  +   +T +GE+   G  ++G L      
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KVI ++ G+  +  +                         +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTL------------------------AV 621

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 675



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 152/389 (39%), Gaps = 61/389 (15%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3015

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQ 201
             ++ CG+ T G+LG G   S + P+  ++++  N  V ++A   G RH++ L  D    +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD---GK 3071

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            V+ +G G  G+LG  S+    +   P++   L    I  I+     SAA+++ G LYTWG
Sbjct: 3072 VFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128

Query: 261  RGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHG 309
             G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    G
Sbjct: 3129 LGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3187

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLF 361
             L          P     + +  L+G  V QI  GA+ S  +T        GK  + RL 
Sbjct: 3188 KLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242

Query: 362  IISYTPFFPPFFIN------------------VIAENRAIMTWGWGEHGQLGLGNTCDQI 403
              +      P  +                    + +   +  WG  +HGQ G G T    
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302

Query: 404  HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
             P +V  G E Q       V CGS  + A
Sbjct: 3303 KPTLVQ-GLEGQK---ITRVACGSSHSVA 3327



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4332


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPAVHEPVLFQTARDPL 3351



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 153/331 (46%), Gaps = 29/331 (8%)

Query: 54  DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+ +L+S + V + A   G H LAL++      G+VFSWG G  G+LGHG+ V 
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           A G   S   +    W   +R+ F++   P 
Sbjct: 768 ACGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 798



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 124/285 (43%), Gaps = 28/285 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4052 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4104

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G LFT G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 4105 GAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4164

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4219

Query: 253  EGHLYTWG-------RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLML 303
             G +YTW         G  S   V  P+ +           A G  H +  T DGEV   
Sbjct: 4220 SGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTW 4279

Query: 304  GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            G +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4280 GDNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4319



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
           +V+SWG G  G+LG G       P+++  S+LS       V  +ACG  +  A+T+    
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + ++ ++ CG + S+ L KD    QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 685

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 9/226 (3%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G +F
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITA-----AGDLF 4118

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K         F    R   G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHG 4238

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4239 -SDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4280



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   +++  +  +    L  ++++G    G+++  A++A+G LY  
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4014

Query: 260  G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G       G   T  V+ P  L S   +   + A+  G  H L L+ +GEV   G +  G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R    RP       + +L G++V+ +AAG  HSA +T                 
Sbjct: 4075 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACITAAGD------------- 4116

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                         + TWG G +G+LG G++ DQ+ PK+V     ++     +++ CGSG
Sbjct: 4117 -------------LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYR----VIDIACGSG 4158



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 68/298 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
           +G +G   Y + S P++     N  V Q+AC  +  L+L ++    +VY   + S   G 
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQVACAEKRFLILSRN---GRVYTQAYNSDTLG- 484

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
                        PQ+   L    IV I+A+ D     ALSA G +++WG       G  
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ + S+LS  QA       A G  +   +T +GE+   G  ++G L      
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KVI ++ G+  +  +                         +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTL------------------------AV 621

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 675



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 155/385 (40%), Gaps = 59/385 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4014

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G L+TWG+      
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRL 4128

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWV------RLFIISYTPF 368
                P+     K+ +L G+ V+++  G++ S  +T     + W       RL   S    
Sbjct: 4189 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHV 4243

Query: 369  FPPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-N 409
              P  +       VIA            E+  + TWG  + GQLG G T     P++V  
Sbjct: 4244 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4303

Query: 410  LGDEFQNRDTQLEVFCGSGFTYAIS 434
            L  +  NR     V CGS  T A S
Sbjct: 4304 LQGKKINR-----VACGSAHTLAWS 4323



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 6/156 (3%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT   +V   +VF 
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFR 4230

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
                   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4231 ----DYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4284

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4285 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4320



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 152/389 (39%), Gaps = 61/389 (15%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3015

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQ 201
             ++ CG+ T G+LG G   S + P+  ++++  N  V ++A   G RH++ L  D    +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD---GK 3071

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            V+ +G G  G+LG  S+    +   P++   L    I  I+     SAA+++ G LYTWG
Sbjct: 3072 VFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128

Query: 261  RGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHG 309
             G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    G
Sbjct: 3129 LGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3187

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLF 361
             L          P     + +  L+G  V QI  GA+ S  +T        GK  + RL 
Sbjct: 3188 KLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242

Query: 362  IISYTPFFPPFFIN------------------VIAENRAIMTWGWGEHGQLGLGNTCDQI 403
              +      P  +                    + +   +  WG  +HGQ G G T    
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302

Query: 404  HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
             P +V  G E Q       V CGS  + A
Sbjct: 3303 KPTLVQ-GLEGQK---ITRVACGSSHSVA 3327



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4275 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4333


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR--IRDIAYGSSHSAPLTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 145/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H LVLT D EV   G +      D   V+   P +        LD   ++ I
Sbjct: 713 IDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFP-----GLDSKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4315



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A       L+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4222

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4011

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4069 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4186 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4241 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4300

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4301 QGKKVNR-----VACGSAHTLAWS 4319



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
            + G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIQALKTKRIRDIAYGSSHSAPLTS------------- 3117

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3118 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 657 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 687

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 688 QRLGHGTEEHVRYPKLLE 705



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3007 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3060

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3061 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3118

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3119 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3175

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3176 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3233

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3234 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3293

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3294 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3342



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 147/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV  T+P   AL     LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV--TKPEPAAL---PGLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4108

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4109 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4168

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4169 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4225

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4226 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4269



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4042 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4094

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4095 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4154

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4155 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4209

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4210 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4269

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4270 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4308



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4161 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4215

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4216 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4273

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4274 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4004

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4005 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4061

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4062 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4118

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4119 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4178

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4179 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4233

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4234 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4293

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4294 QGKKVNR-----VACGSAHTLAWS 4312



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2952 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3009

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3010 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3069

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3070 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3111

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3112 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3152

Query: 425  CGS 427
            CGS
Sbjct: 3153 CGS 3155



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4264 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4322


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 175/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   ++S+V  +ACG  H   +T+      G ++
Sbjct: 245 EVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA-----SGDLY 299

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            WG GS  +G LGHG  V    PK V+   +G    +  ++ G  HS     SG LFT G
Sbjct: 300 DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG--LQVLSVACGSWHSALTMSSGKLFTFG 357

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  S + P +V +       ++ACG+ HS  +++       + +  +++ 
Sbjct: 358 DGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFT 417

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GD+ A L              
Sbjct: 418 WGDGDKNRLG----------------------------HGDKEAKLVP------------ 437

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C Q+L    +F Q A G +  + L   G V  +G S++G L +P +    +P  
Sbjct: 438 -----TCVQALVDH-NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNP-KADGKQPCM 490

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V       L    V +I+ G+ H A +T +                            + 
Sbjct: 491 VQ----DKLGNELVEEISCGSNHVAALTSRSE--------------------------VY 520

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V   D  ++R  +  + CGS FT  I  H
Sbjct: 521 TWGMGANGRLGHGSVEDKKKPTLV---DALKDRHVK-SISCGSNFTTCICIH 568



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G    +L P  +      +   +ACG +  +AL +      G VF
Sbjct: 414 KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALAT-----SGHVF 468

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  ++GQLG+ +  D   P  V    G+   +  IS G NH   ++    ++T G G 
Sbjct: 469 TMGSSNNGQLGNPK-ADGKQPCMVQDKLGNEL-VEEISCGSNHVAALTSRSEVYTWGMGA 526

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
            G+LGHG       P  V +  +++V  I+CG   +  +   C+   V G      SG R
Sbjct: 527 NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI---CIHKWVSGADQSVCSGCR 583

Query: 211 GQLGVSKDR 219
              G ++ R
Sbjct: 584 QPFGFTRKR 592



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 114/313 (36%), Gaps = 87/313 (27%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            I+ G  H G  +  G +FT G+   G+LGHG       P  V S    NV  IACG  H
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 288

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           + V+        +Y +G G           GVS    + VS P     L  ++++ ++  
Sbjct: 289 TCVVTA---SGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGP-----LEGLQVLSVACG 340

Query: 244 GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
              SA   + G L+T+G G                                         
Sbjct: 341 SWHSALTMSSGKLFTFGDG---------------------------------------TF 361

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   HG     +R S   P     ++V  L G + +++A G  HSA +      V +   
Sbjct: 362 GSLGHG-----DRESVAYP-----KEVEALSGFRAMKVACGVWHSAAI------VEISGQ 405

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQL 421
           + T           A +R + TWG G+  +LG G+   ++ P  V   +   F       
Sbjct: 406 ASTN----------AMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH------ 449

Query: 422 EVFCGSGFTYAIS 434
           +V CG   T A++
Sbjct: 450 QVACGHSMTVALA 462


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2764 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2817

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2818 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2875

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2876 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2932

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2933 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2990

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2991 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3050

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3051 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3099



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+  L+S + V + A   G H LAL +      G+V+SWG G   +LGHG+ V 
Sbjct: 457 DTLVPQLVQGLASRNVVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGRRLGHGDTVP 511

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 512 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 571

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 628

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 629 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 688

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 689 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 743

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S+  +  + W
Sbjct: 744 ACGPAQSSAGSSXYEW 759



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3865

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3866 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3925

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3926 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3982

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3983 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4026



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3799 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3851

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 3852 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3911

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 3912 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3966

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3967 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4026

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4027 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4065



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G   +LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 492 EVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 546

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 547 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 606

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 607 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 663

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 664 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 711



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3918 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3972

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 3973 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4030

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4031 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4066



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLLAVTADGKLYAT 3761

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3762 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3818

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3819 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3875

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 3876 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3935

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 3936 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3990

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 3991 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4050

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4051 QGKKVNR-----VACGSAHTLAWS 4069



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 127/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L++ ++           G+     
Sbjct: 405 WGLIGWKYYANVIGPIQCKGLANLGVTQIACAEKRLLIVXRN-----------GRVXTQA 453

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +    +PQ+  GL    +V I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 454 YNSDTL----VPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDT 509

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 510 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 568

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 569 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 599

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 600 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 651



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2709 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2766

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 2767 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2826

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 2827 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 2868

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 2869 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 2909

Query: 425  CGS 427
            CGS
Sbjct: 2910 CGS 2912



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4021 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4079


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 178/419 (42%), Gaps = 110/419 (26%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   PQL+   + S+  ++ACG  H  A+T     + G ++
Sbjct: 332 EVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVT-----LSGDLY 386

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           SWG G+   G LGHG  +    PK V    +G R  +  I+ G  H+  V+ +G LFT G
Sbjct: 387 SWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLR--VASIACGPWHTALVTTTGLLFTFG 444

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGH D +S  SP +V S       + ACG+ H+  +++  +G+         ++
Sbjct: 445 DGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKL 504

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G++G+LG      R V  P     L D                            
Sbjct: 505 FTWGDGEKGRLGHGDKEQRLV--PTCVAALVD---------------------------- 534

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                            +F Q A G++  + LT  G V  +G S +G L DP+       
Sbjct: 535 ----------------HNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLGDPQ------- 571

Query: 323 LSVALEKVSNLDGVKVIQ-----IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
              A  K+  L   K+++     IA GA H AV+T                         
Sbjct: 572 ---ADGKLPGLVEGKLVEAYVEDIACGAHHVAVLT------------------------- 603

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
             N  + TWG G +G+LG G+  D+  P +V    E Q +     + CG+ FT AI  H
Sbjct: 604 -HNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKS----IACGATFTAAICLH 657


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 178/414 (42%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   P L+   ++++V+ +ACG  H  A++S      G +F
Sbjct: 323 EVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSS-----SGDLF 377

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK V+   +G    +  ++ G  HS   + +G LFT G
Sbjct: 378 TWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG--LQVVSVACGTWHSALATSNGKLFTIG 435

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG FG LGHGD  S + P +V         ++ACG+ HS  +                  
Sbjct: 436 DGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAI------------------ 477

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-------FN 264
                                  IE++G S +       ++   L+TWG G        N
Sbjct: 478 -----------------------IEVMGPSGSN------TSAKRLFTWGDGDQYRLGHVN 508

Query: 265 STS--DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +  +  C  ++ +  +F Q A G+   + LT  G V  +GG+ +G L +P       P
Sbjct: 509 KETYLEPTCVAAV-AEYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKV-P 566

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           + V       L G  V +I+ GA H AV+T +                            
Sbjct: 567 ILVR----GKLVGEFVEEISCGANHVAVLTSR--------------------------SE 596

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+T DQ  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 597 LYTWGRGANGRLGHGDTDDQKSPTMV---EALKDRHIK-NISCGSTFTSCICLH 646


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2301 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2354

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2355 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2412

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2413 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2469

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2470 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2527

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2528 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 2587

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 2588 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 2636



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3402

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3403 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3462

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3463 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3519

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3520 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3563



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3336 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3388

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 3389 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3448

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 3449 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3503

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3504 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3563

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 3564 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 3602



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3455 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3509

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 3510 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 3567

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 3568 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3298

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3299 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3355

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3356 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3412

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 3413 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3472

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 3473 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3527

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 3528 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 3587

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 3588 QGKKVNR-----VACGSAHTLAWS 3606



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2246 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2303

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 2304 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2363

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 2364 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 2408

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 2409 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 2446

Query: 425  CGS 427
            CGS
Sbjct: 2447 CGS 2449



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 3558 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 3616


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3273 KVYACGEATNGRLGLG-LSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 3326

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3327 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3384

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3385 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3441

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3442 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3499

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3500 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3559

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3560 KP-----TLVHGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3608



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54   DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
            D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 741  DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 795

Query: 112  ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
               PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 796  LEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 855

Query: 170  VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
            + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 856  MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 912

Query: 230  IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
              L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 913  EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 972

Query: 282  SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
               A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 973  IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 1027

Query: 342  AAGAEHSAVVTGKFHW 357
            A G   S   +    W
Sbjct: 1028 ACGPAQSFAWSSCSEW 1043



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V+ +A GGAH   +T+      G ++
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTA-----AGDLY 4372

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4373 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4432

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4433 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4489

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4490 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4533



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4306 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVADVAAG 4358

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4359 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4418

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4419 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4473

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4474 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4533

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4534 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4572



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 776 EVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAE----- 830

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 831 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 890

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 891 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 947

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 948 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4425 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4479

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4480 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4537

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4538 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4573



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4268

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4269 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4325

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+  ++A G  SA ++A G LYTWG+G     
Sbjct: 4326 EDGKLGHGN---RSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRL 4382

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4383 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4442

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4443 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4497

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4498 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4557

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4558 QGKKVNR-----VACGSAHTLAWS 4576



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V QIAC  +  L+L ++           G+     
Sbjct: 689 WGLIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRN-----------GRVYTQA 737

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 738 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 793

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 794 VPLEEPKVI-STFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 852

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 853 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 883

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 884 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 935



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 3218 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3275

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3276 ACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3335

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3336 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 3380

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3381 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3418

Query: 425  CGS 427
            CGS
Sbjct: 3419 CGS 3421



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4528 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4586


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 167/340 (49%), Gaps = 37/340 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P++++  S ++V ++ACG  H  A+T     + G ++
Sbjct: 310 EIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT-----LSGDLY 364

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    P+ V    +G R  +++IS G  H+  V+ +G LFT G
Sbjct: 365 TWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIR--VSYISCGAWHTAVVTSAGQLFTFG 422

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC------------LG 199
           DG+FG LGHGD+ + + P +V +       ++ACG+ H+   ++                
Sbjct: 423 DGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSS 482

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
            ++Y +G G +G+LG   +  R V  P+    L +  I  ++   D + AL+  G +YT 
Sbjct: 483 RKLYTWGDGDKGRLGHGDNEPRLV--PECVAALIEERICQVACGNDLTVALTTAGRVYTM 540

Query: 259 ----WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
               +G+  ++T++   P  +   ++ S   + A G  HV VLT   EV   G   +G L
Sbjct: 541 GSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +      P  V +     L   +V  +A G++ + V+
Sbjct: 601 GHGDNNHRNTPTIVDV-----LKDKQVKNVACGSKFTVVI 635



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 178/408 (43%), Gaps = 71/408 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H + +T       G++FSWG  S G+LGHG   D  
Sbjct: 277 DALLPKALESTVVLDVHGIACGGRHAVLVTRQ-----GEIFSWGEESGGRLGHGVEADVS 331

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +PK +    G    +  ++ G  H+  V+ SG L+T GDGT  +G LGHG   SH  P K
Sbjct: 332 HPKIIDTLSGTNVEL--VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----------VSKDRI 220
           V   +    V  I+CG  H+ V+       Q++ FG G  G LG             + +
Sbjct: 390 VGGQMEGIRVSYISCGAWHTAVVTS---AGQLFTFGDGSFGALGHGDHITSNFPREVETL 446

Query: 221 RSVSLPQVTIGL----HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQS 274
           R +   +V  G+      +E +   ++   SA+ S+   LYTWG G         N P+ 
Sbjct: 447 RGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSR-KLYTWGDGDKGRLGHGDNEPRL 505

Query: 275 LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           +P  ++        Q A G +  + LT  G V  +G + +G L      +   P  V  E
Sbjct: 506 VPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEGE 564

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
             ++     V ++A G+ H AV+T K                            + TWG 
Sbjct: 565 IANSF----VEEVACGSYHVAVLTSK--------------------------NEVYTWGK 594

Query: 389 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G +GQLG G+   +  P +V++  + Q ++    V CGS FT  I  H
Sbjct: 595 GLNGQLGHGDNNHRNTPTIVDVLKDKQVKN----VACGSKFTVVICIH 638



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 134/338 (39%), Gaps = 80/338 (23%)

Query: 103 QLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
           Q      +DAL PK +      D H      I+ G  H+  V+  G +F+ G+ + G+LG
Sbjct: 269 QCSLNSKLDALLPKALESTVVLDVH-----GIACGGRHAVLVTRQGEIFSWGEESGGRLG 323

Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSK 217
           HG     S P  + +    NV  +ACG  H+  +    L   +Y +G G    G LG   
Sbjct: 324 HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT---LSGDLYTWGDGTHNYGLLGHGS 380

Query: 218 DRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
           +   S  +PQ   G +  I +  IS     +A +++ G L+T+G G              
Sbjct: 381 E--VSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDG-------------- 424

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
                S  ALG                    HG     + ++S  P      +V  L G+
Sbjct: 425 -----SFGALG--------------------HG-----DHITSNFP-----REVETLRGL 449

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +  ++A G  H+A      + +     S +P            +R + TWG G+ G+LG 
Sbjct: 450 RTTKVACGVWHTAAAVEAINELSDSGTSASP-----------SSRKLYTWGDGDKGRLGH 498

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           G+   ++ P+ V    E    +   +V CG+  T A++
Sbjct: 499 GDNEPRLVPECVAALIE----ERICQVACGNDLTVALT 532


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV+S G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2923 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2976

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2977 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR--IRDIAYGSSHSAPLTSSGELYTW 3034

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3035 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3091

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3092 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3149

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3150 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3209

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3210 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3258



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 145/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 391 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 445

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 446 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 505

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 562

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 563 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 622

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H LVLT D EV   G +      D   V+   P +        LD   ++ I
Sbjct: 623 IDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFP-----GLDSKHIVGI 677

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 678 ACGPAQSFAWSSCSEW 693



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4025

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4026 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4085

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4086 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4142

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4143 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4186



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3959 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4011

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4012 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4071

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4072 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4126

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4127 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4186

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4187 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4225



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 426 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 480

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 481 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 540

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 541 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 597

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A       L+ +  +++WG
Sbjct: 598 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4078 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4132

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4133 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4190

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4191 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3921

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3922 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3978

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3979 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4035

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4036 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4095

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4096 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4150

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4151 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4210

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4211 QGKKVNR-----VACGSAHTLAWS 4229



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V Q+AC  +  L+L ++           G+     
Sbjct: 339 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 387

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 388 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 443

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 444 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 502

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 503 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 533

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 534 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 585



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2868 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2925

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
            + G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 2926 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2985

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 2986 DDGKLGHFSRMNCDKP-----RLIQALKTKRIRDIAYGSSHSAPLTS------------- 3027

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3028 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3068

Query: 425  CGS 427
            CGS
Sbjct: 3069 CGS 3071



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V    ++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 394 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 448

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P+V       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 449 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 508

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 509 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 566

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   VI++  G++ S  +T                          ++  + +WG G++
Sbjct: 567 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 597

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 598 QRLGHGTEEHVRYPKLLE 615



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4181 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4239


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 151/331 (45%), Gaps = 29/331 (8%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+  L+S + V + A   G H LAL +      G+VFSWG G  G+LGHG+ V 
Sbjct: 481 DTLGPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVFSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  R++   P ++       LD   ++ I
Sbjct: 713 VDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPTALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           A G   S   +    W   +R+ F++   P 
Sbjct: 768 ACGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 798



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
           +V+SWG G  G+LG G       P+++  S+LS       V  +ACG  +  A+T+    
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKG 685

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   ++V ++A      AL+ +  +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4038 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4092

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4093 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4150

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4151 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4186



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 68/298 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
           +G +G   Y +   P++     N  + QIAC  +  L+L ++    +VY   + S   G 
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRN---GRVYMQAYNSDTLG- 484

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
                        PQ+  GL    IV I+A+ D     AL+A G +++WG       G  
Sbjct: 485 -------------PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 531

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ + S+LS  QA       A G  +   +T +GE+   G  ++G L      
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KVI ++ G+  +  +                         +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLA------------------------V 621

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 152/389 (39%), Gaps = 61/389 (15%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQ 201
             ++ CG+ T G+LG G   S + P+  ++++  N  V ++A   G RH++ L  D    +
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD---GK 3068

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            V+ +G G  G+LG  S+    +   P++   L    I  I+     SAA+++ G LYTWG
Sbjct: 3069 VFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3125

Query: 261  RGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHG 309
             G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    G
Sbjct: 3126 LGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3184

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLF 361
             L          P     + +  L+G  V QI  GA+ S  +T        GK  + RL 
Sbjct: 3185 KLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 362  IISYTPFFPPFFIN------------------VIAENRAIMTWGWGEHGQLGLGNTCDQI 403
              +      P  +                    + +   +  WG  +HGQ G G T    
Sbjct: 3240 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 404  HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
             P +V  G E Q       V CGS  + A
Sbjct: 3300 KPTLVQ-GLEGQK---ITRVACGSSHSVA 3324



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 34/198 (17%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKP---------------------------VTFFDG 123
            G ++ WG    GQLG  E      P P                           V    G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 124  HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
            +R       +G   +  ++D   +++ GDG +G+LG G       P+K+ S     V ++
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4074

Query: 184  ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISA 242
             CG + S+ L K      VY +G G   +LG  S D +R    P+   GL   +++ I+ 
Sbjct: 4075 ECGSQFSVALTK---SGAVYTWGKGDYHRLGHGSDDHVRR---PRQVQGLQGKKVIAIAT 4128

Query: 243  NGDRSAALSAEGHLYTWG 260
                    + +G +YTWG
Sbjct: 4129 GSLHCVCCTEDGEVYTWG 4146



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4141 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4199


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157

Query: 425  CGS 427
            CGS
Sbjct: 3158 CGS 3160



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2990 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3043

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3044 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3101

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3102 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3158

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3159 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3216

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3217 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3276

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3277 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3325



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + + + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 458 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 512

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 513 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 572

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 629

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 630 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 689

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 690 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 744

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 745 ACGPAQSFAWSSCSEW 760



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4093

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4094 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4153

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4154 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4210

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4211 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4254



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4027 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4079

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 4080 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4139

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4140 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4194

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4195 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4254

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4255 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4293



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 493 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 547

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 548 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 607

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 608 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 664

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 665 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4146 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4200

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4201 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4258

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4259 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4294



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3989

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3990 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4046

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4047 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4103

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4104 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4163

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4164 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4218

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4219 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4278

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4279 QGKKVNR-----VACGSAHTLAWS 4297



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 406 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 454

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    I+ I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 455 YNSDTL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 510

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 511 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 569

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 570 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 600

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 601 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 652



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2932 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 2989

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 2990 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3044

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3045 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3101

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3102 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3160

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3161 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3199

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3200 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3230



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2935 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2992

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 2993 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3052

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3053 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3094

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3095 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3135

Query: 425  CGS 427
            CGS
Sbjct: 3136 CGS 3138



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4249 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4307


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3005 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3058

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3059 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3116

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3117 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3173

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3174 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3231

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3232 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3291

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3292 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3340



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 147/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV  T+P   AL     LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV--TKPEPAAL---PGLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4001 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4055

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4056 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4115

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4116 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4172

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4173 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4216



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3989 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4041

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4042 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4101

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4102 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4156

Query: 253  EGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+      G  S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4157 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4216

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4217 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4255



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4108 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4162

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4163 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4220

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4221 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4256



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 126/317 (39%), Gaps = 56/317 (17%)

Query: 131  ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
            +++G  H   +S  G +++ G+   G+LGHG+      P  + S     V  +A G  HS
Sbjct: 3986 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4045

Query: 191  LVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-R 246
              +        +Y +G G+ G+LG   S+D+++    P++   L    +V I+  +GD +
Sbjct: 4046 ACVTA---AGDLYTWGKGRYGRLGHSDSEDQLK----PKLVEALQGHRVVDIACGSGDAQ 4098

Query: 247  SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG 298
            +  L+ +  +++WG       G   +     P  + S   L   +   G    + LT  G
Sbjct: 4099 TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSG 4158

Query: 299  EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
             V   G   +  L         RP      +V  L G KVI IA G+ H    T      
Sbjct: 4159 AVYTWGKGDYHRLGHGSDDHVRRP-----RQVQGLQGKKVIAIATGSLHCVCCT------ 4207

Query: 359  RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNR 417
                                E+  + TWG  + GQLG G T     P++V  L  +  NR
Sbjct: 4208 --------------------EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4247

Query: 418  DTQLEVFCGSGFTYAIS 434
                 V CGS  T A S
Sbjct: 4248 -----VACGSAHTLAWS 4259



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2950 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3007

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3008 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3067

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3068 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 3112

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3113 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3150

Query: 425  CGS 427
            CGS
Sbjct: 3151 CGS 3153



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4211 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4269


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 181/413 (43%), Gaps = 100/413 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++ +V ++ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTT-----AGELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG+ V    PK +    +G    + ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGKDVSHWIPKRIAGALEG--LAVAYVSCGTWHTALITTMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHG+  S S P +V S        +ACG+ H+  +++  +          +++
Sbjct: 210 DGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLF 269

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G + +LG                            +GD+   L             
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPRLKP----------- 290

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                  C  SL     F + A G +  + LT  G+VL +G + +G L +P        L
Sbjct: 291 ------TCVASLI-DYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCL 343

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                 V  + G  V+Q+A G+ H AV+T K                            +
Sbjct: 344 ------VEEIVGENVVQVACGSYHVAVLTIK--------------------------SEV 371

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+   K+  L +  ++R  +  + CG+ FT AI +H
Sbjct: 372 FTWGKGANGRLGHGDIEDR---KIPTLVEALRDRSVR-HIACGANFTAAICQH 420


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 153/325 (47%), Gaps = 27/325 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV+  G  + G+LG        SP+ +   S   +  +A   GG H +AL+     + GK
Sbjct: 2646 KVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALS-----LDGK 2700

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V SWG G  G+LGHG+++    PK +      R  + +I+ G  HS  ++  G L+T G 
Sbjct: 2701 VLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKR--VFYIACGSAHSAAITSDGELYTWGQ 2758

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LGH D  S  +P  V  FV KN+ Q+ACG R +  L  D  GN VY +G G  G+
Sbjct: 2759 GQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGN-VYSWGDGDFGK 2817

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            LG  +        PQ    L    +V I      S AL+A G ++TWG+      G    
Sbjct: 2818 LG--RGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRG 2875

Query: 267  SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
              V  P +L + L   +    A+G  H + ++  G+V   G + HG   +    ++  P 
Sbjct: 2876 EHVRRP-TLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEP- 2933

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHS 348
                  V+N + +K+ ++  G+  S
Sbjct: 2934 ----RLVTNFNNIKINRVGCGSSQS 2954



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G DG+LG G       PQL+   S   +  +ACGG H  A++       G ++
Sbjct: 3653 EVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISR-----YGHLY 3707

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D LYPK V     +        +G   +  V+    +++ GDG 
Sbjct: 3708 TWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGD 3767

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LGH    S   P K+ S   K + QI CG + S+ L        +Y +G G   +LG
Sbjct: 3768 YGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVAL---SANGTLYTWGKGDYFRLG 3824

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S + +R    P+   GL   +IV  S       AL+ +G +Y WG
Sbjct: 3825 HGSSEHVRK---PKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWG 3868



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 176/431 (40%), Gaps = 59/431 (13%)

Query: 21   KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAH 78
            +P++E +        V+ WG    GQLG G    ++     N  L++L  + ++  GG+ 
Sbjct: 2580 QPEVESKIRVDSEYAVYVWGLNDKGQLG-GLNGSKVKRPTFNEALTALKPIEIV--GGSK 2636

Query: 79   VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
             L + S      GKVF  G  S G+LG         P+ +            + +G  H+
Sbjct: 2637 SLFIVSNE----GKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHA 2692

Query: 139  GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
              +S  G + + GDG  G+LGHGD  +  +P  + S + K V  IACG  HS  +  D  
Sbjct: 2693 MALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSD-- 2750

Query: 199  GNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
              ++Y +G G+ G+LG S +  + +  L +  +G  +I  V   +   ++ AL +EG++Y
Sbjct: 2751 -GELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVG-KNITQVACGSRDAQTLALDSEGNVY 2808

Query: 258  TWGRG-FNST----SDVNC-PQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            +WG G F       SD  C PQ +   +     Q   G    + LT  G+V   G   + 
Sbjct: 2809 SWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYY 2868

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L         RP  V   K+  +D      IA G  H   V+ +               
Sbjct: 2869 RLGLGRGEHVRRPTLVNQLKLVTID-----HIAVGTLHCIAVSTQ--------------- 2908

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSG 428
                         +  WG  +HGQ G G T     P++V N  +   NR     V CGS 
Sbjct: 2909 -----------GDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINR-----VGCGSS 2952

Query: 429  FTYAISRHCLP 439
             + A     LP
Sbjct: 2953 QSIAWKCPVLP 2963



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 161/415 (38%), Gaps = 91/415 (21%)

Query: 12   GKSALINNAKPKIEEEEEEQQVVKV----WSWGAGTDGQLGTGRLHDELSPQLLNLSSLS 67
            G+   INN K   E +E+  Q +      W+   G +GQ+     H+    QL  + S  
Sbjct: 3506 GEHIFINNLKFTKEHDEQLLQWLNSKPDDWNMTWGGNGQVVYVWGHNHRG-QLACMDSSQ 3564

Query: 68   SVSMLACGGAHVLALTSPSSVIGG-----------KVFSWGRGSSGQLGHGEMVDALYPK 116
                LAC    VL    P+ VIGG           KV++ G   SG+LG G   +   P 
Sbjct: 3565 VKKPLACDSLSVL---KPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPY-NPKNPY 3620

Query: 117  PVT--FFDGHRYTI-THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
             VT     G    I   +++G  H   +S +G ++  GDG  G+LG G+  +HS P  V 
Sbjct: 3621 VVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQ 3680

Query: 174  SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG------------------- 214
            S  +K +  IACG  HS  + +      +Y +G G+ G+LG                   
Sbjct: 3681 SLSDKCIIDIACGGFHSAAISR---YGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINY 3737

Query: 215  -----------------VSKDRI----------------RSVSLPQVTIGLHDIEIVGIS 241
                              S D +                 S  LP     L    I+ I 
Sbjct: 3738 HVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQID 3797

Query: 242  ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLV 293
                 S ALSA G LYTWG+      G  S+  V  P+ +         Q + G  HVL 
Sbjct: 3798 CGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLA 3857

Query: 294  LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            LT DGEV   G +  G L D       RP  +A      L G ++ Q++ G+ HS
Sbjct: 3858 LTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAA-----LKGKRIQQVSCGSAHS 3907



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 29/248 (11%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G+V+SWG    G LGHG+   +   P+P+  F   +  +  +S G +    V++ G L+ 
Sbjct: 511 GEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFS--KLIVVMVSCGKDFCAAVTEDGKLYM 568

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
                +G++ H     ++ P  V S    +V +++CG   +  L    L  + Y F    
Sbjct: 569 -----WGKILHSSNCCYT-PELVKSISEWHVSKVSCGSSINNTL---ALSREGYVFSFEY 619

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           R       D+  +V +P + +   D EIV I  + D +A +    +++TWGR      G 
Sbjct: 620 RNSDRGCDDKSLNV-IPSMIV--FDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGH 676

Query: 264 NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N++  VN P+ +   S    +  +L  +++L LT  G+V   G        D E  +  R
Sbjct: 677 NNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWGQ------LDNENTTQCR 730

Query: 322 PLSVALEK 329
           P+   + +
Sbjct: 731 PVKCLMNR 738



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 10/97 (10%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
              VF+WGRG++  LGH        PK V F  G +  +T +S   ++   ++D+G ++ 
Sbjct: 660 ANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQ--VTSLSLADDYILALTDTGQVY- 716

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
                +GQL + +  +   PVK    +N+ V +IAC 
Sbjct: 717 ----CWGQLDNEN-TTQCRPVKC--LMNRQVKKIACS 746


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 163/360 (45%), Gaps = 56/360 (15%)

Query: 35  KVWSWGAGTDGQLGTG---RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVI 89
           ++++WG  + GQLG G   R      PQ   LSSL  V +  LACGG H  AL+     +
Sbjct: 162 RIFAWGDNSFGQLGIGAPGRTLYRDHPQ--QLSSLPGVPIRRLACGGWHSFALS-----V 214

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G VF WG+ + GQLG G   D + P P+      +  + +I+ G N++  ++ SG LF 
Sbjct: 215 SGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQ--VKYIACGQNYTAILTASGGLFL 272

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G G+ GQLGHG + +  +P  V  F+   + Q+ACG +H+LVL  +    + +  G G 
Sbjct: 273 FGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL--EGRTGRFFSLGQGS 330

Query: 210 RGQLGVSKDRIRSVS--------LPQVTIGLHDIE----IVG-ISANGDRSAALSAEG-- 254
           +GQLG+  D  +S +         P  T G  + E    I+G I A GD+S  + + G  
Sbjct: 331 KGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRGND 390

Query: 255 --HLYTWGRGFNSTSDVNCPQSL------------PSS------LSFSQAALGWNHVLVL 294
             H   +     S   V   + L            PS       ++ S  A      LV 
Sbjct: 391 PDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVG 450

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            G G + + G    G L      +   P S     V +  G ++ Q+A G +H+ V+ G+
Sbjct: 451 AGSGGLFLFGQGSEGQLGHGSHSNEVNPRS-----VKDFLGNEITQVACGRQHTLVLEGR 505



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 142/336 (42%), Gaps = 32/336 (9%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDEL----SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           + V+SWG   DGQLG   L D++    SP+ +   +   +  ++CG  H   L     + 
Sbjct: 1   MSVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVL-----LR 55

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G V   G    GQLG       L   P T        IT +S G +H+  V+D G +  
Sbjct: 56  DGTVMMCGANDRGQLGQDRPGSELAHVPAT----ETLVITQVSCGNDHTLAVTDRGQVLG 111

Query: 150 CGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G    GQ G   GD      P  + S  +  V Q+ACG  HS+ L +D    +++ +G 
Sbjct: 112 WGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRD---GRIFAWGD 168

Query: 208 GKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
              GQLG+ +  R      PQ    L  + I  ++  G  S ALS  G ++ WG+     
Sbjct: 169 NSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQ 228

Query: 262 -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G  +T D   P  L +  +      A G N+  +LT  G + + G    G L      +
Sbjct: 229 LGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSN 288

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
              P S     V    G ++ Q+A G +H+ V+ G+
Sbjct: 289 EVNPRS-----VQGFLGSEITQVACGRQHTLVLEGR 319



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 56/297 (18%)

Query: 152 DGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           DG  G  G GD   S SSP +V +   K + +I+CG+RH+ VLL+D     V   G+  R
Sbjct: 11  DGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRD---GTVMMCGANDR 67

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           GQLG  +       +P        + I  +S   D + A++  G +  WGR      G +
Sbjct: 68  GQLGQDRPGSELAHVPAT----ETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLS 123

Query: 265 S--TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPER-V 317
           +  + D   P+ L   SS   +Q A G  H + LT DG +   G +  G L    P R +
Sbjct: 124 TGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTL 183

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               P     +++S+L GV + ++A G  HS            F +S +           
Sbjct: 184 YRDHP-----QQLSSLPGVPIRRLACGGWHS------------FALSVS----------- 215

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
               A+  WG    GQLGLG T D++ P  +      + +  +  + CG  +T  ++
Sbjct: 216 ---GAVFGWGKNNCGQLGLGTTEDRVSPTPLK---NLKTKQVKY-IACGQNYTAILT 265



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 142/362 (39%), Gaps = 69/362 (19%)

Query: 93  VFSWGRGSSGQLG---HGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
           VFSWG    GQLG    G+ V +L  P+ V    G +  I  IS G  H+  +   G + 
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQ--IREISCGLRHTCVLLRDGTVM 60

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            CG    GQLG    R  S    V +     + Q++CG  H+L +       QV G+G  
Sbjct: 61  MCGANDRGQLGQD--RPGSELAHVPATETLVITQVSCGNDHTLAVTDR---GQVLGWGRN 115

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
            RGQ G+S         P+    L   ++  ++     S AL+ +G ++ WG        
Sbjct: 116 DRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLG 175

Query: 269 VNCP------------QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SD 313
           +  P             SLP       A  GW H   L+  G V   G ++ G L   + 
Sbjct: 176 IGAPGRTLYRDHPQQLSSLPGVPIRRLACGGW-HSFALSVSGAVFGWGKNNCGQLGLGTT 234

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
            +RVS T PL        NL   +V  IA G  ++A++T                     
Sbjct: 235 EDRVSPT-PLK-------NLKTKQVKYIACGQNYTAILTA-------------------- 266

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTY 431
                 +  +  +G G  GQLG G+  ++++P+ V   LG E        +V CG   T 
Sbjct: 267 ------SGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEIT------QVACGRQHTL 314

Query: 432 AI 433
            +
Sbjct: 315 VL 316



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 15/126 (11%)

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           SG LF  G G+ GQLGHG + +  +P  V  F+   + Q+ACG +H+LVL     G   Y
Sbjct: 453 SGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGG--FY 510

Query: 204 GFGSGKRGQLGVSKDRIRSVS--------LPQVTIGLHDIE----IVG-ISANGDRSAAL 250
             G G +GQLG+     +S +         P  T G  + E    I+G I A GD+S  +
Sbjct: 511 SLGQGSKGQLGLDNGSSKSCASLVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCI 570

Query: 251 SAEGHL 256
            + G++
Sbjct: 571 VSRGNI 576



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ +G G++GQLG G   +E++P+ +     + ++ +ACG  H L L   +    G  +S
Sbjct: 456 LFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRT----GGFYS 511

Query: 96  WGRGSSGQLG 105
            G+GS GQLG
Sbjct: 512 LGQGSKGQLG 521


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 171/402 (42%), Gaps = 56/402 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G   D L+P  + +  L+SV+ +A G  H LA+        G V+
Sbjct: 327 TVWAWGLNFWGQLGDGTRSDRLTP--VQVPDLTSVTAIAAGDYHTLAVRQD-----GTVW 379

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G   D L P  V    G    +T I+AG +H+  +   G ++  GD  
Sbjct: 380 AWGDNVWGQLGDGTYTDRLTPVQVPGLTG----VTAIAAGESHTVAMRQDGTVWAWGDNV 435

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G Y    +PV+V      +V  IA G  H+L + +D     V  +G    GQLG
Sbjct: 436 WGQLGDGTYTDRLTPVQVPDL--TSVTAIAAGDYHTLAVRQD---GTVCAWGFNAYGQLG 490

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWG------RGFNSTS 267
                 RS S P +  GL  + +    A GD  + A+  +G ++ WG       G  +T 
Sbjct: 491 DGTSS-RSPS-PVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATI 548

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           D   P  +P     +  A G  H L    DG V   G + +G L D        P+    
Sbjct: 549 DRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPV---- 604

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFIN---- 375
            +V  L GV    +AAG  HS  +         G+  W +L   +      P  ++    
Sbjct: 605 -QVPGLTGVSA--MAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTG 661

Query: 376 ------------VIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                        + ++  +  WG+ + GQLG G T  ++ P
Sbjct: 662 VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAP 703



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 159/382 (41%), Gaps = 63/382 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G   + L+P  + +  L+ V+ +A G  H LA+        G V+
Sbjct: 177 TVWAWGDNAWGQLGDGTRTNRLTP--VQVPGLTGVTAIAAGDYHTLAVRQD-----GTVW 229

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQLG G   + L P  V    G    +T ISAG +H+  V   G ++  GD  
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPGLTG----VTAISAGESHTVAVRQDGTVWAWGDNV 285

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
           +GQLG G      +PV+V       V  IA G RH+  + +D     V+ +G    GQL 
Sbjct: 286 WGQLGDGTRTDRLTPVQVPGL--SGVTAIAEGRRHTFAVRQD---GTVWAWGLNFWGQLG 340

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            G   DR+  V +P +T       +  I+A    + A+  +G ++ WG       G  + 
Sbjct: 341 DGTRSDRLTPVQVPDLT------SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTY 394

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +D   P  +P     +  A G +H + +  DG V   G +  G L D        P+ V 
Sbjct: 395 TDRLTPVQVPGLTGVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVP 454

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
                  D   V  IAAG  H+  V                           ++  +  W
Sbjct: 455 -------DLTSVTAIAAGDYHTLAVR--------------------------QDGTVCAW 481

Query: 387 GWGEHGQLGLGNTCDQIHPKVV 408
           G+  +GQLG G +     P +V
Sbjct: 482 GFNAYGQLGDGTSSRSPSPVMV 503



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 167/403 (41%), Gaps = 61/403 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G   +  +P  + +  L+ V+ +A G  H  A++       G V+
Sbjct: 77  TVWAWGLNVWGQLGDGTHTERHTP--VQVPGLTGVTAIAAGRRHTFAVSQD-----GTVW 129

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G   D   P  +    G    +T I+AG  H+  V   G ++  GD  
Sbjct: 130 AWGDNDWGQLGDGTRADRHTPVQLPELTG----VTAIAAGRRHTFAVRQDGTVWAWGDNA 185

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
           +GQLG G   +  +PV+V       V  IA G  H+L + +D     V+ +G+   GQL 
Sbjct: 186 WGQLGDGTRTNRLTPVQVPGL--TGVTAIAAGDYHTLAVRQD---GTVWAWGNNALGQLG 240

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            G   +R+  V +P +T       +  ISA    + A+  +G ++ WG       G  + 
Sbjct: 241 DGTYTERLTPVQVPGLT------GVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTR 294

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +D   P  +P     +  A G  H   +  DG V   G +  G L D  R     P+ V 
Sbjct: 295 TDRLTPVQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVP 354

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFI---- 374
                  D   V  IAAG  H+  V         G   W +L   +YT    P  +    
Sbjct: 355 -------DLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPGLT 407

Query: 375 ----------NVIAENRAIMTWGWGEH--GQLGLGNTCDQIHP 405
                     + +A  +    W WG++  GQLG G   D++ P
Sbjct: 408 GVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTP 450



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 166/401 (41%), Gaps = 61/401 (15%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           W+WG    GQLG G   D L+P  + +  L+ V+ +A G  H  A+        G V++W
Sbjct: 29  WAWGNNAWGQLGDGTRTDRLTP--VQVPGLTGVTAVAAGRHHTFAVRQD-----GTVWAW 81

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLG G   +   P  V    G    +T I+AG  H+  VS  G ++  GD  +G
Sbjct: 82  GLNVWGQLGDGTHTERHTPVQVPGLTG----VTAIAAGRRHTFAVSQDGTVWAWGDNDWG 137

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--G 214
           QLG G      +PV++       V  IA G RH+  + +D     V+ +G    GQL  G
Sbjct: 138 QLGDGTRADRHTPVQLPEL--TGVTAIAAGRRHTFAVRQD---GTVWAWGDNAWGQLGDG 192

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
              +R+  V +P +T       +  I+A    + A+  +G ++ WG       G  + ++
Sbjct: 193 TRTNRLTPVQVPGLT------GVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTE 246

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +P     +  + G +H + +  DG V   G +  G L D  R     P+     
Sbjct: 247 RLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPV----- 301

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFINVIAEN 380
           +V  L GV    IA G  H+  V         G   W +L   + +    P  +  +   
Sbjct: 302 QVPGLSGVTA--IAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLTSV 359

Query: 381 RAI--------------MTWGWGEH--GQLGLGNTCDQIHP 405
            AI                W WG++  GQLG G   D++ P
Sbjct: 360 TAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTP 400



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 177/450 (39%), Gaps = 102/450 (22%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT----------- 83
            VW+WG    GQLG G   D L+P  + +  L+SV+ +A G  H LA+            
Sbjct: 427 TVWAWGDNVWGQLGDGTYTDRLTP--VQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFN 484

Query: 84  ------------SPSSVI-------------------------GGKVFSWGRGSSGQLGH 106
                       SPS V+                          G V++WG  +SGQLG 
Sbjct: 485 AYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGD 544

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +D   P  +    G    +T I+AG  H+      G +++ G  ++GQLG G     
Sbjct: 545 GATIDRRIPVQIPGLAG----VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHR 600

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
            SPV+V       V  +A G  HS+ LL+D     V  +G    GQLG   D   +  L 
Sbjct: 601 LSPVQVPGL--TGVSAMAAGDAHSVALLQD---GTVSAWGRNSWGQLG---DGTTAARLT 652

Query: 227 QVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL 279
            V +  H +  +  ++A    + AL  +G ++ WG       G  +T+    P  +    
Sbjct: 653 PVQV--HGLTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLT 710

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
             +  A G+ H + +  DG V   G +  G L D    + + P+     +V  L GV  +
Sbjct: 711 DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPV-----QVQELTGVSAL 765

Query: 340 QIAAGAEHSAVVTGK---FHW-----VRLFIISYTPFFPPFFINVIAENRAIMT------ 385
             AAG  H+  V      + W      +L   S T  + P ++  +    A+        
Sbjct: 766 --AAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEGLTGVSALTAGRFHTA 823

Query: 386 --------WGWGEH--GQLGLGNTCDQIHP 405
                   W WG +  GQ+G G T D+  P
Sbjct: 824 AVSPEGFGWAWGRNNFGQVGDGTTADRPRP 853



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 125/310 (40%), Gaps = 50/310 (16%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +T  +AG  H+  V   G  +  G+  +GQLG G      +PV+V       V  +A G 
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGL--TGVTAVAAGR 66

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H+  + +D     V+ +G    GQL  G   +R   V +P +T       +  I+A   
Sbjct: 67  HHTFAVRQD---GTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT------GVTAIAAGRR 117

Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
            + A+S +G ++ WG       G  + +D + P  LP     +  A G  H   +  DG 
Sbjct: 118 HTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAIAAGRRHTFAVRQDGT 177

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHWV 358
           V   G +  G L D  R +   P+     +V  L GV    IAAG  H+ AV      W 
Sbjct: 178 VWAWGDNAWGQLGDGTRTNRLTPV-----QVPGLTGVTA--IAAGDYHTLAVRQDGTVWA 230

Query: 359 -------RLFIISYTPFFPPFFI--------------NVIAENRAIMTWGWGEH--GQLG 395
                  +L   +YT    P  +              + +A  +    W WG++  GQLG
Sbjct: 231 WGNNALGQLGDGTYTERLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLG 290

Query: 396 LGNTCDQIHP 405
            G   D++ P
Sbjct: 291 DGTRTDRLTP 300



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 11/138 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G      +P  + +  L+ VS LA G AH +A+        G V+
Sbjct: 730 TVWAWGYNLWGQLGDGSSTARSTP--VQVQELTGVSALAAGYAHTVAVKQD-----GTVW 782

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S  QLG+G   D   P  V    G    ++ ++AG  H+  VS  G  +  G   
Sbjct: 783 AWGNNSGTQLGNGSSTDRYTPVWVEGLTG----VSALTAGRFHTAAVSPEGFGWAWGRNN 838

Query: 155 FGQLGHGDYRSHSSPVKV 172
           FGQ+G G       PV V
Sbjct: 839 FGQVGDGTTADRPRPVDV 856



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 13/115 (11%)

Query: 4   PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
           P+  +   G SAL       +  +++      VW+WG  +  QLG G   D  +P  + +
Sbjct: 753 PVQVQELTGVSALAAGYAHTVAVKQDG----TVWAWGNNSGTQLGNGSSTDRYTP--VWV 806

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
             L+ VS L  G  H  A+ SP     G  ++WGR + GQ+G G   D   P+PV
Sbjct: 807 EGLTGVSALTAGRFHTAAV-SPE----GFGWAWGRNNFGQVGDGTTAD--RPRPV 854


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 166/389 (42%), Gaps = 55/389 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+ + GQLG G + DE  L+P  +  +  ++V  +ACG  H L LT+      GK
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFF---DGHRYTITHISAGWNHSGFVSDSGCLFT 149
           V++ G     QLGH   +    P+   F    +   Y I  I  G  HS  +SD G + +
Sbjct: 61  VYACGSNDYSQLGHD--LPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLS 118

Query: 150 CGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            GD   GQLGH  D      P  V   V K V QIACG  HSL  L  C   ++Y +GS 
Sbjct: 119 WGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA-LTSC--GELYSWGSN 175

Query: 209 KRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             GQLGV S + +   + P     L  I +  I+  G+ S  +S  G ++ WGR      
Sbjct: 176 IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQL 235

Query: 262 GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G N  ++ + P  L +  +L     A G    + LT +G V   G   +G L      + 
Sbjct: 236 GLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 295

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       V  L G  + Q+A G  H+                         + ++  
Sbjct: 296 MLP-----RMVMELMGSTITQVACGNRHT-------------------------LALVPS 325

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              +  +G G  GQLG  +T   + P+VV
Sbjct: 326 RGRVYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG    +D       L L++L  + +  +ACGG H   ++       G
Sbjct: 168 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 222

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            VF WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTCG
Sbjct: 223 AVFGWGRNNCGQLGLNDETNRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 280

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VY FG G  G
Sbjct: 281 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 338

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S+ LPQV IG
Sbjct: 339 QLGTRS--TKSLMLPQVVIG 356



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 146/333 (43%), Gaps = 49/333 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          +  ++ G  H+ F++ +G ++ 
Sbjct: 4   GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63

Query: 150 CGDGTFGQLGHG--DYRSHSSP-VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           CG   + QLGH     R   SP + +    +  + QI CG RHSL L       QV  +G
Sbjct: 64  CGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSD---WGQVLSWG 120

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
               GQLG + D+   V LP+V   L    +V I+   + S AL++ G LY+WG      
Sbjct: 121 DNDCGQLGHATDK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 179

Query: 262 -GFNSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
            G NS +D+   N P  L + L    AA+  G NH  +++  G V   G ++ G L   +
Sbjct: 180 LGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLND 239

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
             + + P      ++  L  + V  +A G E S  +T +                     
Sbjct: 240 ETNRSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNE--------------------- 273

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                  + T G G +GQLG G + +++ P++V
Sbjct: 274 -----GGVFTCGAGAYGQLGHGFSSNEMLPRMV 301


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2952 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALT-----VD 3005

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3006 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3063

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3064 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3120

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3121 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3178

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3179 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3238

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3239 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3287



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 144/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 411 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 465

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G + +L HG    +   
Sbjct: 466 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEIL 525

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + +S    +     +CG+R +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 526 IMISGLDRQKFIYKSCGIRFAQTLAFYENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 582

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 583 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 642

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 643 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 697

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 698 ACGPAQSFAWSSCSEW 713



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTA-----AGDLY 4053

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4054 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4113

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4114 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4170

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4171 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4214



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3987 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRG--VEVVDVAAG 4039

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4040 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4099

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4100 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4154

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4155 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4214

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4215 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4253



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 177/437 (40%), Gaps = 57/437 (13%)

Query: 7    EETEKGKS-ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
            EE EKG S +LI      +E     +   KV+ WG     QLG  +      P      S
Sbjct: 2873 EEDEKGSSGSLIRKKAAGLESTATIR--TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 2930

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGH 124
              +V  +A G   + A+T     + GKV++ G  ++G+LG G     +  P+ +T    +
Sbjct: 2931 ALNVVQVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSY 2985

Query: 125  RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
                  + +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K +  IA
Sbjct: 2986 MVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3045

Query: 185  CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISAN 243
            CG  HS  L       ++Y +G G+ G+LG   +  +    + +V +G H +  V   + 
Sbjct: 3046 CGSSHSAALTS---SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGSR 3101

Query: 244  GDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
              ++ AL+ EG +++WG G         +   N PQ++   +     Q   G    L LT
Sbjct: 3102 DAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3161

Query: 296  GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
              G V   G   +  L     V   +P     + V  L G K++ +A GA H   VT   
Sbjct: 3162 KSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVT--- 3213

Query: 356  HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                                   ++  +  WG  +HGQ G G T     P +V  G E Q
Sbjct: 3214 -----------------------DSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ 3249

Query: 416  NRDTQLEVFCGSGFTYA 432
                   V CGS  + A
Sbjct: 3250 K---ITRVACGSSHSVA 3263



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 446 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 500

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+  +L HG          ++  D  ++        +  +    ++G +++ 
Sbjct: 501 GELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSW 560

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 561 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 617

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 618 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4106 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4160

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4161 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4218

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4219 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3949

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S SSP  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3950 GYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4006

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  +E+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4007 EDGKLGHGS---RSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4063

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4064 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4123

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4124 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4178

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4179 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4238

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4239 QGKKVNR-----VACGSAHTLAWS 4257



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 23/165 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VWSWG G  G+LG G      +P+L+       V  + CG    +ALT       G+V+
Sbjct: 556 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK-----DGQVY 610

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG+G + +LGHG      YPK +    G +  +  ++AG  H        CL    D  
Sbjct: 611 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK--VIDVAAGSTH--------CLALTEDSE 660

Query: 155 FGQLGHGDYRSH--------SSPVKVSSFVNKNVHQIACGMRHSL 191
               G  D   H          P  +     K++  IACG   S 
Sbjct: 661 VHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSF 705



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 66/297 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRGQL 213
           +G +G   Y +   P++     N  V QIAC  +  L+L ++ C+  Q Y          
Sbjct: 359 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN--------- 409

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNS 265
                       PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   
Sbjct: 410 -------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD 462

Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           T  +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++  L D  R +
Sbjct: 463 TVPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRL-DHGRSA 520

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
               ++  L  +S LD  K I  + G   +  +                    F+     
Sbjct: 521 ----MNEILIMISGLDRQKFIYKSCGIRFAQTLA-------------------FY----- 552

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 553 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 605



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 118/299 (39%), Gaps = 64/299 (21%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACG 186
           +T I+        +S +GC++T             Y S + +P  V    ++N+ +IA  
Sbjct: 384 VTQIACAEKRFLILSRNGCVYTQA-----------YNSDTLAPQLVQGLASRNIVKIAAH 432

Query: 187 M--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE----IVGI 240
               H L L       +VY +G G  G+LG   D +  +  P+V       +    +V I
Sbjct: 433 SDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEEPKVISAFSGKQAGKHVVHI 487

Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSD-----VNCPQSLPSSLS-----FSQAALGWNH 290
           +     SAA++AEG LYTWGRG     D     +N    + S L      +    + +  
Sbjct: 488 ACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQ 547

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            L    +G+V   G   +G L          P    +EK+ +LD   V+++  G++ S  
Sbjct: 548 TLAFYENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSIA 602

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           +T                          ++  + +WG G++ +LG G      +PK++ 
Sbjct: 603 LT--------------------------KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 635



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4209 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSAGKL 4267


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 145/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P       +  LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++     + V  +A GGAH   +T+      G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA-----AGDLY 4116

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         S +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4277



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAG 4102

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4162

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  + DGEV   G
Sbjct: 4218 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4277

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4316



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4223

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    S+ G ++T GD   
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCSEDGEVYTWGDNDE 4281

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 4012

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4013 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L   E+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4070 EDGKLGHGN---RSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4186

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4187 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4242 RPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4301

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4302 QGKKVNR-----VACGSAHTLAWS 4320



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3067

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3068 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3125 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3184 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3222

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3223 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 3120

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3121 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 148/324 (45%), Gaps = 29/324 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG+   G+LG G + DE  L P+ L+    ++V  +ACG  H + +T       G+V
Sbjct: 28  MYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITK-----DGEV 82

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           FS G   SGQLGH +    L   P        +     + G +HS  V++ G LF  G  
Sbjct: 83  FSCGNNDSGQLGHEKPTKRLQMIP----GLDAFIFKQAACGASHSVAVNNWGQLFCWGSN 138

Query: 154 TFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQLG G   + + +P  V +     V QIACG +H+L L  +    ++Y +GS   GQ
Sbjct: 139 ADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNN---GELYAWGSNSDGQ 195

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+ +D ++  + P++  GL  I I  I+  G  S  +S  G ++ WGR      G N  
Sbjct: 196 LGLGQD-VKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDI 254

Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           SD   P  L +  +      A G    + LT DG V   G   +G L      +   P  
Sbjct: 255 SDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILP-- 312

Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
               ++  L G  V QI+ G  H+
Sbjct: 313 ---RQIIELMGSVVTQISCGKRHT 333



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG+ +DGQLG G+ +  E  P+L+   +   ++ +ACGG H + ++       G V
Sbjct: 184 ELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSK-----SGAV 238

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR + GQLG  ++ D   P  +      +  + +++ G   S F++  G +FTCG G
Sbjct: 239 FGWGRNTFGQLGMNDISDKYVPCLLKTLRNAK--VKYVACGEEFSVFLTMDGGVFTCGAG 296

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG   +   P ++   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 297 MYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPS--RGKVYAWGLGGSGQL 354

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G      RSV+ PQ+ +G
Sbjct: 355 GSQT--ARSVATPQMVLG 370



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 109/229 (47%), Gaps = 17/229 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++ WG+  DGQLG G  L    +P+++     S V  +ACG  H LALT+      G++
Sbjct: 131 QLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN-----NGEL 185

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG  S GQLG G+ V  +  +P          I  I+ G  HS  VS SG +F  G  
Sbjct: 186 YAWGSNSDGQLGLGQDV-KIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRN 244

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           TFGQLG  D      P  + +  N  V  +ACG   S+ L  D     V+  G+G  GQL
Sbjct: 245 TFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD---GGVFTCGAGMYGQL 301

Query: 214 --GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTW 259
             G + + I    LP+  I L    +  IS     + AL  + G +Y W
Sbjct: 302 GHGANSNEI----LPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 179/404 (44%), Gaps = 66/404 (16%)

Query: 35   KVWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
            ++++WG  + GQLG G      + +P+ +     S + M++CGG H +A+         +
Sbjct: 1052 ELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQ-----SFQ 1106

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            ++SWG    GQLGHG +     PK +  F G +  +  I+ G+ H+  +  SG LFT G 
Sbjct: 1107 IYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLA-IATGYAHTMVLKKSGDLFTFGW 1165

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVH-----QIACGMRHSLVLLKDCLGN-QVYGFG 206
               GQLG G++++ + P+++ +     +H      IA G  HS++    CL N  +Y +G
Sbjct: 1166 NDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIM----CLDNGDIYSWG 1221

Query: 207  SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
            +  +GQLG     I     P+    L    I+ IS     + A+S    +Y WG+G +  
Sbjct: 1222 ANSKGQLG--HGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMC 1279

Query: 267  --SDVNCPQSLPSSLSF------SQAALGWNHVLVLTG------DGEVLMLGGSHHGMLS 312
              +  N  +  P  + F       +   G  H   +T        G V + GG  HG L 
Sbjct: 1280 LGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLG 1339

Query: 313  ---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
               D +     +P       + +L+ + ++  ++G+E SA++T                 
Sbjct: 1340 TGGDLKTPFFDKPHPAV---IPSLNSMNIVGFSSGSEFSAIITN---------------- 1380

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                      N A+ TWG+G  GQ+G G T D   P  ++L D+
Sbjct: 1381 ----------NGALYTWGYGNFGQIGNGKTEDMWLPTKISLNDQ 1414



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 120/293 (40%), Gaps = 67/293 (22%)

Query: 32   QVVKVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
            Q  +++SWG+   GQLG G L  + L  ++ + +    V  +A G AH + L        
Sbjct: 1103 QSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKK-----S 1157

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVT---FFDGHRYTITHISAGWNHSGFVSDSGCL 147
            G +F++G   SGQLG G   +   P  +        H   IT I+AG +HS    D+G +
Sbjct: 1158 GDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDI 1217

Query: 148  FTCGDGTFGQLGHGDY-------------------------------------------- 163
            ++ G  + GQLGHG+                                             
Sbjct: 1218 YSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEH 1277

Query: 164  --------RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---QVYGFGSGKRGQ 212
                    ++  SP  +  F+NK + ++ CG+ H+  +     G+    VY  G G+ G+
Sbjct: 1278 MCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGK 1337

Query: 213  LGVS---KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            LG     K        P V   L+ + IVG S+  + SA ++  G LYTWG G
Sbjct: 1338 LGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYG 1390


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 51/389 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQ-LLNLS---SLSSVSMLACGGAHVLALTSPSSVIG- 90
           V+SWG    GQLG G  ++   P  +L+LS   +  +V  +  G +H       S+VI  
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSH-------SAVIAE 53

Query: 91  -GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G V++WGRG  GQLGH ++V  +  +P           + ++ G NH+  V+D+G ++T
Sbjct: 54  DGDVYTWGRGWEGQLGH-DVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYT 112

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            G+   GQLG GD +S +SPV + S +N  +V  IACG  H++ +   C+   ++ +G  
Sbjct: 113 WGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAI---CIEGTIWSWGRN 169

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
           + GQLG      ++   P   +G+     +  +  G  +  L+    +Y WG       G
Sbjct: 170 QCGQLG--HGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLG 227

Query: 263 FNSTSDVNCPQSLPSSLSFSQAA---LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
            N +        +   L  S A     G++H + L  + ++   G +  G L       S
Sbjct: 228 LNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHS 287

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P     E V+ L  V+V QIA G +H          V        P  PP        
Sbjct: 288 PVP-----ELVTALRSVRVQQIACGYDHC---------VAFVADEVEPGMPPL------- 326

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + +WG GE GQLG      +  P++V
Sbjct: 327 -EHVYSWGRGEEGQLGHNELLSRCTPRIV 354



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 17/145 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           K+++WG+   GQLG  R     L P +++    S    + CG +H +AL         ++
Sbjct: 214 KIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNE-----QI 268

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDS-------- 144
           ++WGR   GQLG G    +  P+ VT     R  +  I+ G++H   FV+D         
Sbjct: 269 YTWGRNDCGQLGLGHYTHSPVPELVTALRSVR--VQQIACGYDHCVAFVADEVEPGMPPL 326

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSP 169
             +++ G G  GQLGH +  S  +P
Sbjct: 327 EHVYSWGRGEEGQLGHNELLSRCTP 351



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG---- 90
           ++++WG    GQLG G       P+L+       V  +ACG  H +A  +     G    
Sbjct: 267 QIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPL 326

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPV 118
             V+SWGRG  GQLGH E++    P+ V
Sbjct: 327 EHVYSWGRGEEGQLGHNELLSRCTPRIV 354


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + + + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4116

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4102

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4162

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4218 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4316



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4223

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4012

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4070 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4186

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4187 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4242 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4301

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4302 QGKKVNR-----VACGSAHTLAWS 4320



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    I+ I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3067

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3068 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3125 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3184 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3222

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3223 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3117

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3118 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3011 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3064

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3065 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3122

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3123 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3179

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3180 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3237

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3238 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3297

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3298 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3346



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 145/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P       +  LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++     + V  +A GGAH   +T+      G ++
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA-----AGDLY 4114

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4115 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4174

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4175 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4231

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         S +G +YTWG
Sbjct: 4232 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4275



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4048 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAG 4100

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 4101 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4160

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4161 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4215

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  + DGEV   G
Sbjct: 4216 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4275

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4276 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4314



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4167 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4221

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    S+ G ++T GD   
Sbjct: 4222 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCSEDGEVYTWGDNDE 4279

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4280 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 4010

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4011 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4067

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L   E+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4068 EDGKLGHGN---RSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4124

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4125 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4184

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4185 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4239

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4240 RPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4299

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4300 QGKKVNR-----VACGSAHTLAWS 4318



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2953 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3010

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3011 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3065

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3066 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3122

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3123 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3181

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3182 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3220

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3221 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3251



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2956 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3013

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3014 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3073

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3074 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 3118

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3119 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3156

Query: 425  CGS 427
            CGS
Sbjct: 3157 CGS 3159



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4270 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4328


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 145/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P       +  LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++     + V  +A GGAH   +T+      G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA-----AGDLY 4115

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         S +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4276



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAG 4101

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4161

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  + DGEV   G
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4276

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4315



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4222

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    S+ G ++T GD   
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCSEDGEVYTWGDNDE 4280

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 4011

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4012 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L   E+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4069 EDGKLGHGN---RSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4186 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4241 RPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4300

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4301 QGKKVNR-----VACGSAHTLAWS 4319



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3067

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3068 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3125 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3184 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3222

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3223 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGE---------- 3120

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                            + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3121 ----------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 155/337 (45%), Gaps = 38/337 (11%)

Query: 36  VWSWGAGTDGQ-----LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           V+ WG G+        LG G L D+L P    + SLS V +++ G  H  AL S      
Sbjct: 645 VYMWGRGSVKNPPLSTLGNGSLEDQLLPT--KVESLSEVVLVSIGYYHSAALKS-----N 697

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++ +WG G  GQLGHG++++   PK V     H   +T +  G  H+  ++ +G +FT 
Sbjct: 698 GELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHW--VTQVQCGEKHTICLTKNGKVFTW 755

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   +GQLG GD + + +P+ V+S    N+ QIACG  H  VL       +V  FG+G  
Sbjct: 756 GTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTN---AREVLVFGNG-- 810

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
             +G +      +S+P +   L  + I  +S     +AAL+  G +YTWG G       N
Sbjct: 811 AAMGSA----NIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQELGHGTN 866

Query: 271 CPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             +  P       S S  Q + G  H+  LT  G++   G    G L   +     +P  
Sbjct: 867 QSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQG-DQNKP-- 923

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
              +K+ +L     I ++ G  H+A +   F   R F
Sbjct: 924 ---KKIDSLLKTTFISVSCGENHNASL---FDTTRSF 954



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 54/206 (26%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI----- 89
           KV++WG    GQLG G      +P L+      ++  +ACG  H   LT+   V+     
Sbjct: 751 KVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNG 810

Query: 90  --------------------------------------GGKVFSWGRGSSGQLGHGEMVD 111
                                                  G V++WG G   +LGHG    
Sbjct: 811 AAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGTNQS 868

Query: 112 ALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSS 168
            L+PK     DG R  +I  IS G  H  F++DSG ++TCG   FGQLGH  GD    + 
Sbjct: 869 ELHPK---LVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQGD---QNK 922

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLL 194
           P K+ S +      ++CG  H+  L 
Sbjct: 923 PKKIDSLLKTTFISVSCGENHNASLF 948



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 60/305 (19%)

Query: 147 LFTCGDGTFGQLG---HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           + T G  +  +LG    G  +S ++P ++ +F    +  I+CG  +S  L ++     VY
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTEN---GDVY 646

Query: 204 --GFGSGKRGQL-----GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
             G GS K   L     G  +D++    LP     L   E+V +S     SAAL + G L
Sbjct: 647 MWGRGSVKNPPLSTLGNGSLEDQL----LPTKVESLS--EVVLVSIGYYHSAALKSNGEL 700

Query: 257 YTWGRGFNST---SDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSH 307
            TWG G +      DV   Q++P  +        +Q   G  H + LT +G+V   G S 
Sbjct: 701 LTWGCGEDGQLGHGDV-LNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSE 759

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF------ 361
           +G L   +   +  P+ V     ++L+   +IQIA G+ H AV+T     V +F      
Sbjct: 760 YGQLGLGDTQKNCTPMLV-----TSLEKYNIIQIACGSTHCAVLTNA-REVLVFGNGAAM 813

Query: 362 ----IISYTPFFPPF-FINV------------IAENRAIMTWGWGEHGQLGLGNTCDQIH 404
               IIS     P    +N+            + E   + TWG G+  +LG G    ++H
Sbjct: 814 GSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGTNQSELH 871

Query: 405 PKVVN 409
           PK+V+
Sbjct: 872 PKLVD 876



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 63/239 (26%)

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
           GF +  R Q   + +R+ + ++P         EI  IS     SAAL+  G +Y WGRG 
Sbjct: 602 GFKTEGREQSQATPERLPNFNIP---------EICSISCGSYYSAALTENGDVYMWGRG- 651

Query: 264 NSTSDVNCP-----------QSLPSSL-SFSQAAL---GWNHVLVLTGDGEVLMLGGSHH 308
              S  N P           Q LP+ + S S+  L   G+ H   L  +GE+L  G    
Sbjct: 652 ---SVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLVSIGYYHSAALKSNGELLTWGCGED 708

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   + ++ T P     + V  +    V Q+  G +H+  +T                
Sbjct: 709 GQLGHGDVLNQTIP-----KVVQTMTSHWVTQVQCGEKHTICLT---------------- 747

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                     +N  + TWG  E+GQLGLG+T     P +V   +++      +++ CGS
Sbjct: 748 ----------KNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKY----NIIQIACGS 792


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3020 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3073

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3074 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3131

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3132 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3188

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3189 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3246

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3247 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3306

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3307 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3355



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           V V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4057 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4109

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +    +V  +ACG     +L 
Sbjct: 4110 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLC 4169

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4170 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4224

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4225 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4284

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4285 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4323



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4123

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GH        +G   +  ++D   +++ GDG 
Sbjct: 4124 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4183

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4184 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4240

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4241 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4284



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4176 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4230

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4231 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4288

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4289 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4019

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4020 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4076

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4077 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4133

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L            G    L LT D  V   G   +G L      
Sbjct: 4134 GHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4193

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4194 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4248

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4249 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4308

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4309 QGKKVNR-----VACGSAHTLAWS 4327



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPVLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2962 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3019

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3020 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3074

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3075 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3131

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3132 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3190

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3191 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3229

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3230 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3260



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2965 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3022

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3023 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3082

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3083 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3124

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3125 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3165

Query: 425  CGS 427
            CGS
Sbjct: 3166 CGS 3168



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4279 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4337


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           V V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4102

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +    +V  +ACG     +L 
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLC 4162

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4218 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4316



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4116

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GH        +G   +  ++D   +++ GDG 
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4169 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4223

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4282 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4012

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4070 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L            G    L LT D  V   G   +G L      
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4186

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4187 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4242 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4301

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4302 QGKKVNR-----VACGSAHTLAWS 4320



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPVLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3067

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3068 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3125 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3184 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3222

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3223 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3253



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3117

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3118 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 187/409 (45%), Gaps = 69/409 (16%)

Query: 50  GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
           G   D L P+ L  + +  V  +ACGG H   +T       G+VFSWG  S G+LGHG  
Sbjct: 292 GAKMDSLFPKALESAVVLDVQNIACGGRHAALVTKQ-----GEVFSWGEESGGRLGHGVD 346

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHS 167
            D L+PK +         I  ++ G  HS  V+ SG L+T G+GT+  G LGHG+  SH 
Sbjct: 347 SDVLHPKLIEALSN--TNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHW 404

Query: 168 SPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
            P +V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR +SVSLP
Sbjct: 405 VPKRVNGPLEGIHVSYISCGPWHTAVVTS---AGQLFTFGDGTFGALG-HGDR-KSVSLP 459

Query: 227 QVTIGLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFN-STSDVNCPQ 273
           +    L  +  V  +     +AA+             +   L+TWG G       V+   
Sbjct: 460 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEA 519

Query: 274 SL-PSSLSFS-----QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            L P+ ++ +     Q A G +  + LT  G V  +G   +G L +P+   +   L + +
Sbjct: 520 KLVPTCVALAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQ---ADGKLPILV 576

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
           E    L    V +IA GA H AV+T +                            + TWG
Sbjct: 577 E--GKLSESFVEEIACGAYHVAVLTSRTE--------------------------VYTWG 608

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            G +G+LG G+T D+  P +V   +  +++D +  + CG+ FT AI  H
Sbjct: 609 KGANGRLGHGDTDDRNTPTLV---EALKDKDVK-SIACGTTFTAAICLH 653



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 165/338 (48%), Gaps = 37/338 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG  + G+LG G   D L P+L+   S +++ ++ACG  H  A+T     + G ++
Sbjct: 329 EVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVT-----LSGDLY 383

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    +++IS G  H+  V+ +G LFT G
Sbjct: 384 TWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFG 441

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P +V S       + ACG+ H+  +++  +GN          +
Sbjct: 442 DGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDL 501

Query: 203 YGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
           + +G G +G+LG V K+      L    + L +  +  ++     + AL+  G +YT   
Sbjct: 502 FTWGDGDKGRLGHVDKE----AKLVPTCVALAEHNVCQVACGHSLTVALTTSGRVYTMGS 557

Query: 259 --WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
             +G+  N  +D   P  +   LS S   + A G  HV VLT   EV   G   +G L  
Sbjct: 558 PVYGQLGNPQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGH 617

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            +  +  R     +E + + D   V  IA G   +A +
Sbjct: 618 GD--TDDRNTPTLVEALKDKD---VKSIACGTTFTAAI 650



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 11/171 (6%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V +++WG G  G+LG      +L P  + L+   +V  +ACG +  +ALT+      G+V
Sbjct: 499 VDLFTWGDGDKGRLGHVDKEAKLVPTCVALAE-HNVCQVACGHSLTVALTT-----SGRV 552

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++ G    GQLG+ +  D   P  V       + +  I+ G  H   ++    ++T G G
Sbjct: 553 YTMGSPVYGQLGNPQ-ADGKLPILVEGKLSESF-VEEIACGAYHVAVLTSRTEVYTWGKG 610

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
             G+LGHGD    ++P  V +  +K+V  IACG   +  +   CL   V G
Sbjct: 611 ANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAI---CLHKWVSG 658


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 132/424 (31%), Positives = 191/424 (45%), Gaps = 69/424 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW  G   DG +    +  D L+P+ L  + +  V  +ACG  HV  +T       G+V
Sbjct: 234 EVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALVTR-----QGEV 288

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG  S G+LGHG   D   P  V F   +   +  ++ G  H+  VS SG LFT GDG
Sbjct: 289 FTWGEESGGRLGHGIDNDFSRPHLVEFLAVN--NVDFVACGEYHTCAVSTSGDLFTWGDG 346

Query: 154 TF--GQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           T   G LGHG   SH  P +VS  +    V  +ACG  HS +   +    +++ FG G  
Sbjct: 347 THNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSN---GKLFTFGDGTF 403

Query: 211 GQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANGDRSAALSAEG------HLYTWG 260
           G LG   DR  SV  P   Q+  GL  I++  G+         +S  G       L+TWG
Sbjct: 404 GVLG-HGDR-ESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWG 461

Query: 261 RGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G          ++  LP+ +S      F Q A G    + LT  G V  +GG+ +G L 
Sbjct: 462 DGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG 521

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           +P  +S  R   +  +K   L G  V +I+ GA H AV+T +                  
Sbjct: 522 NP--LSDGRLPCLVQDK---LVGEFVEEISCGAYHVAVLTSRSE---------------- 560

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                     + TWG G +G+LG G+T D+  P  V   +  ++R+ +  + CGS FT +
Sbjct: 561 ----------VFTWGRGANGRLGHGDTEDRRSPTFV---EALKDRNVK-SISCGSNFTAS 606

Query: 433 ISRH 436
           I  H
Sbjct: 607 ICIH 610



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   LACG    +ALT+      G VF
Sbjct: 456 KLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTT-----SGHVF 510

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G  + GQLG+    G +   +  K V  F      +  IS G  H   ++    +FT 
Sbjct: 511 TMGGTAYGQLGNPLSDGRLPCLVQDKLVGEF------VEEISCGAYHVAVLTSRSEVFTW 564

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---- 206
           G G  G+LGHGD     SP  V +  ++NV  I+CG   +  +   C+   V G      
Sbjct: 565 GRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI---CIHKWVSGADQSVC 621

Query: 207 SGKRGQLGVSKDR 219
           SG R   G ++ R
Sbjct: 622 SGCRQAFGFTRKR 634


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2237 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2290

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2291 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2348

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2349 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2405

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2406 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2463

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2464 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 2523

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 2524 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 2572



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 13/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3286 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3340

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3341 TWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 3400

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3401 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3457

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I A G        E   YTWG
Sbjct: 3458 HGSDDHVRR---PRQVQGLQGKKVIAI-ATGSLHCVCCTEDGSYTWG 3500



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 123/284 (43%), Gaps = 28/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3274 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3326

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 3327 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLC 3386

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 3387 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3441

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DG     G
Sbjct: 3442 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWG 3500

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 3501 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 3539



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 8/156 (5%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3393 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3447

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G  +T GD   
Sbjct: 3448 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGS-YTWGDNDE 3504

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 3505 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 153/383 (39%), Gaps = 57/383 (14%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 3236

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3237 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3293

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3294 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3350

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 3351 GHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3410

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 3411 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3465

Query: 370  PPFFINVIAENRAI-----------------MTWGWGEHGQLGLGNTCDQIHPKVV-NLG 411
             P  +  +   + I                  TWG  + GQLG G T     P++V  L 
Sbjct: 3466 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGSYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 3525

Query: 412  DEFQNRDTQLEVFCGSGFTYAIS 434
             +  NR     V CGS  T A S
Sbjct: 3526 GKKVNR-----VACGSAHTLAWS 3543



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 2236

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 2237 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 2291

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 2292 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2348

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 2349 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2407

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 2408 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 2446

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 2447 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2477



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2182 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2239

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 2240 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2299

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 2300 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 2341

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 2342 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 2382

Query: 425  CGS 427
            CGS
Sbjct: 2383 CGS 2385


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 3016 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L++ 
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 3127

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVSWTTMDVATPSVHEPVLFQTARDPL 3351



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 153/331 (46%), Gaps = 29/331 (8%)

Query: 54  DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+ +L+S + V + A   G H LAL +      G+VFSWG G  G+LGHG+ V 
Sbjct: 481 DILGPQLVQSLASRNIVKIAAHSDGHHYLALAA-----TGEVFSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++IV +S     S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
                G  H L LT D EV   G +      D  R+  T+P   AL     LD   ++ I
Sbjct: 713 IDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRI--TKPDPTAL---PGLDSKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           A G   S   +    W   +R+ F++   P 
Sbjct: 768 ACGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 798



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 4052 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4104

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G L+T G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 4105 GAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4164

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTK 4219

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4220 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4318



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLY 4118

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
           +V+SWG G  G+LG G       P+++  S+LS       V  +ACG  +  A+T+    
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + ++ +++CG + S+ L KD    QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKD---GQVYSWGKG 685

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   +++ + A      AL+ +  +Y+WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTK-----SGAVYT 4225

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4014

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L  IE+V I+A G  SA ++A G LYTWG+      
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRL 4128

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L GV V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4189 GCKVPM-----KIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4244 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4303

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4304 QGKKINR-----VACGSAHTLAWS 4322



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 68/298 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
           +G +G   Y + S P++     +  V QIAC  +  L+L ++    +VY   + S   G 
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLASLGVTQIACAEKRFLILSRN---GRVYTQAYNSDILG- 484

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
                        PQ+   L    IV I+A+ D     AL+A G +++WG       G  
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 531

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ + S+LS  QA       A G  +   +T +GE+   G  ++G L      
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KVI ++ G+  +  +                         +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTL------------------------AV 621

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDI-VKVSCGSQFSVALTK 675



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 134/385 (34%), Gaps = 97/385 (25%)

Query: 87   SVIGGKVFSWGRGSSGQLG-----------HGEMVDAL---------------------- 113
            + I  KVF WG     QLG             E + AL                      
Sbjct: 2959 ATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018

Query: 114  --------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
                                 P+ +T    +      + +G  H+  ++  G +F+ G+G
Sbjct: 3019 ACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGH    +   P  + +   K +  IACG  HS  +       ++Y +G G+ G+L
Sbjct: 3079 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYSWGLGEYGRL 3135

Query: 214  GVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            G   +  +    + +V +G H +  V   +   ++ AL+ EG +++WG       G   +
Sbjct: 3136 GHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               N PQ++   +     Q   G    L LT  G V   G   +  L     V   +P  
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP-- 3252

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               + V  L G K+I +A GA H   VT                          +   + 
Sbjct: 3253 ---QVVEGLRGKKIIHVAVGALHCLAVT--------------------------DTGQVY 3283

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG  +HGQ G G T     P +V 
Sbjct: 3284 AWGDNDHGQQGNGTTTVNRKPTLVQ 3308



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   S+    + A+  G  H + LT DG+V   G  
Sbjct: 3019 ACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3079 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITS------------- 3120

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + +WG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3121 -------------SGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3161

Query: 425  CGS 427
            CGS
Sbjct: 3162 CGS 3164



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 54/258 (20%)

Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRS 222
           P  V S  ++N+ +IA      H L L       +V+ +G G  G+LG    V  +  + 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLAL---AATGEVFSWGCGDGGRLGHGDTVPLEEPKM 541

Query: 223 VS-LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           +S L     G H   +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 542 ISALSGKQAGKH---VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     + G      L +T +G+V   G   +G L          P    +EK+ 
Sbjct: 599 TGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   +++++ G++ S  +T                          ++  + +WG G++
Sbjct: 657 DLD---IVKVSCGSQFSVALT--------------------------KDGQVYSWGKGDN 687

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 688 QRLGHGTEEHVRYPKLLE 705



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4332


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 185/407 (45%), Gaps = 71/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H   +T       G++FSWG  + G+LGHG   D L
Sbjct: 297 DSLFPKSLESAVVLDVQNIACGGRHAALVTKQ-----GEIFSWGEEAGGRLGHGVDSDVL 351

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
           +PK +         I  ++ G  H+  V+ SG L+T G+GT+  G LGHG+  SH  P +
Sbjct: 352 HPKLIEALSN--TNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKR 409

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR +SVSLP+   
Sbjct: 410 VNGPLEGIHVSYISCGPWHTAVVTS---AGQLFTFGDGTFGALG-HGDR-KSVSLPREVE 464

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNSTSDVNCPQS--LP 276
            L  +  V  +     +AA+             + G L+TWG G          ++  +P
Sbjct: 465 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 524

Query: 277 SSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           + ++       F Q A G +  + LT  G V  +G   +G L  P+      P+ V  + 
Sbjct: 525 TRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQ-ADGKLPICVEWK- 582

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
              L    V +IA GA H AV+T +                            + TWG G
Sbjct: 583 ---LSESFVEEIACGAYHVAVLTSRTE--------------------------VYTWGKG 613

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G+T D+  P +V   +  +++D +  + CG+ FT AI  H
Sbjct: 614 ANGRLGHGDTDDRNTPTLV---EALKDKDVK-SIACGTNFTAAICLH 656



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 163/339 (48%), Gaps = 37/339 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG    G+LG G   D L P+L+   S +++ ++ACG  H  A+T     + G ++
Sbjct: 330 EIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVT-----LSGDLY 384

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    +++IS G  H+  V+ +G LFT G
Sbjct: 385 TWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFG 442

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 443 DGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 502

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSAEGHLYTWG 260
           + +G G +G+LG      +   L    + L +++     ++     + AL+ +GH+YT G
Sbjct: 503 FTWGDGDKGRLGHGD---KEAKLVPTRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMG 559

Query: 261 RGFN-----STSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                      +D   P  +   LS S   + A G  HV VLT   EV   G   +G L 
Sbjct: 560 SPVYGQLGIPQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 619

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             +  +  R     +E + + D   V  IA G   +A +
Sbjct: 620 HGD--TDDRNTPTLVEALKDKD---VKSIACGTNFTAAI 653


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3014 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3067

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3068 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3125

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3126 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3182

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3183 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3240

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3241 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3300

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +P       V  L+G K+ ++A G+ HS   T
Sbjct: 3301 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3327



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 144/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + + + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DALAPQLVQGLASRNIIKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG       P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           V V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P       +  LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ V    G    +  ++AG
Sbjct: 4051 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRG--IEVVDVAAG 4103

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 4104 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4163

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4164 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4218

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4219 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4279 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4317



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4117

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4178 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4234

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4235 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D + P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4170 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4224

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4225 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4282

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4283 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 4013

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4014 GYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4070

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4071 EDGKLGHGN---RSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4127

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4128 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4187

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4188 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4242

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4243 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4302

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4303 QGKKVNR-----VACGSAHTLAWS 4321



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     +  V QIAC  +  L+L +           SG+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSR-----------SGRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    I+ I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDAL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 VIPVLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 136/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2956 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3013

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3014 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3068

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAA+++ G LYTW
Sbjct: 3069 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3125

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3126 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3184

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 3185 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 3223

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3224 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3254



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2959 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3016

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3017 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3076

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3077 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITS------------- 3118

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3119 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3159

Query: 425  CGS 427
            CGS
Sbjct: 3160 CGS 3162



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSTGKL 4331


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 2764 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 2817

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GK+FSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2818 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 2875

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2876 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2932

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2933 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2990

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2991 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3050

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3051 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3099



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 3801 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 3853

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G L+T G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 3854 GAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 3913

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 3914 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3968

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3969 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4028

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4029 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4067



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLY 3867

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 3868 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 3927

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3928 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3984

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3985 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4028



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3920 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3974

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 3975 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4032

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4033 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4068



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPI--QLIGGEQTLFAVTADGKLYAT 3763

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3764 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3820

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L  IE+V I+A G  SA ++A G LYTWG+      
Sbjct: 3821 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRL 3877

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 3878 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3937

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 3938 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3992

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 3993 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4052

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4053 QGKKINR-----VACGSAHTLAWS 4071



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 144/409 (35%), Gaps = 101/409 (24%)

Query: 86   SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
            ++ I  KVF WG     QLG             E + AL                     
Sbjct: 2706 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2765

Query: 114  ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
                                  P+ +T    +      + +G  H+  ++  G +F+ G+
Sbjct: 2766 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 2825

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  G+LGH    +   P  + +   K +  IACG  HS  +       ++Y +G G+ G+
Sbjct: 2826 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 2882

Query: 213  LGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            LG   +  +    + +V +G H +  V   +   ++ AL+ EG +++WG       G   
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 2941

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +   N PQ++   +     Q   G    L LT  G V   G   +  L     V   +P 
Sbjct: 2942 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3000

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                + V  L G K++ +A GA H   VT                          +   +
Sbjct: 3001 ----QVVEGLRGKKIVHVAVGALHCLAVT--------------------------DTGQV 3030

Query: 384  MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
              WG  +HGQ G G T     P +V  G E Q       V CGS  + A
Sbjct: 3031 YAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQK---ITRVACGSSHSVA 3075



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VWSWG G  G+LG G      +P+L+       V  + CG    +ALT       G+V+
Sbjct: 410 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK-----DGQVY 464

Query: 95  SWGRGSSGQLGHGEMVDALYPK 116
           SWG+G + +LGHG      YPK
Sbjct: 465 SWGKGDNQRLGHGTEEHVRYPK 486



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 23/131 (17%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD------------------ 196
           +G +G   Y +   P++     N  + QIAC  +  L+L ++                  
Sbjct: 343 WGLIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA 402

Query: 197 ---CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
               +  QV+ +G G  G+LG  +        P++   L D+++V +      S AL+ +
Sbjct: 403 VFSLIFGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 460

Query: 254 GHLYTWGRGFN 264
           G +Y+WG+G N
Sbjct: 461 GQVYSWGKGDN 471



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G +++ GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYS 465

Query: 205 FGSGKRGQLG 214
           +G G   +LG
Sbjct: 466 WGKGDNQRLG 475



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 59  QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
           + L LS    V M A     ++ + +  S+I G+V+SWG G  G+LG G       PK +
Sbjct: 377 RFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLI 436

Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
                    +  +  G   S  ++  G +++ G G   +LGHG
Sbjct: 437 EKL--QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 477



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4023 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4081


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 174/413 (42%), Gaps = 99/413 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   PQL+   + +SV  +ACG  H  A+T     + G+++
Sbjct: 297 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVT-----MTGEIY 351

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK ++   +G    I  +S G  H+  ++ +G LFT G
Sbjct: 352 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG--LQIASVSCGPWHTALITSTGQLFTFG 409

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD  +   P +V S        +ACG+ H+  +++  +        SGK  
Sbjct: 410 DGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGK-- 467

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----- 266
                                                       L+TWG G  S      
Sbjct: 468 --------------------------------------------LFTWGDGDKSRLGHGD 483

Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +     +  S+L   +F + A G +  + LT  G+V  +G + +G L +P       P 
Sbjct: 484 KESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPN-ADGKLPC 542

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            V  + + +     V +IA GA H AV+T +                            +
Sbjct: 543 LVEDKLIKDC----VEEIACGAYHVAVLTSR--------------------------NEV 572

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P +V   D  + R  +  + CGS FT AI  H
Sbjct: 573 FTWGKGANGRLGHGDIEDRKAPSLV---DTLKERHVK-NIACGSNFTAAICLH 621



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 46/280 (16%)

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
           P  + S V  +VH IACG+RH+ ++ +     +V+ +G    G+LG  + KD    V+ P
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQ---GEVFTWGEASGGRLGHGMGKD----VTGP 320

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST------SDVN--CPQSLP-- 276
           Q+   L    +  ++     + A++  G +YTWG G ++       +DV+   P+ +   
Sbjct: 321 QLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGP 380

Query: 277 -SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
              L  +  + G  H  ++T  G++   G    G+L   ++ +   P      +V +L G
Sbjct: 381 LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYP-----REVESLSG 435

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
           ++ I +A G  H+A +      V + +   T        + I+  + + TWG G+  +LG
Sbjct: 436 LRTIAVACGVWHAAAI------VEVIVTQST--------SSISSGK-LFTWGDGDKSRLG 480

Query: 396 LGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAIS 434
            G+   ++ P  V+ L D   +R     V CG   T  ++
Sbjct: 481 HGDKESRLKPTCVSALIDHTFHR-----VACGHSLTVGLT 515


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 182/414 (43%), Gaps = 101/414 (24%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG    G+LG G   +   P+L+   S  +V ++ACG  H  A+T+      G +
Sbjct: 282 AEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTAT-----GDL 336

Query: 94  FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+  +G LGHG  V    PK V+   DG    ++ +S G  H+  ++ SG L+T 
Sbjct: 337 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDG--LPVSAVSCGTWHTALITSSGQLYTF 394

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYG 204
           GDGTFG LGHG+  S S P +V S        ++CG+ H+  +++  +        +++ 
Sbjct: 395 GDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFT 454

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GDRS+ L              
Sbjct: 455 WGDGDKYRLG----------------------------HGDRSSKLK------------- 473

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                  P  +PS    +F +AA G    + LT  G +  +G   +G L +P   +  R 
Sbjct: 474 -------PTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPN--NDGRY 524

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             +  E+   L G  V+++A G+ H AV+T                              
Sbjct: 525 PRLVEEQ---LGGGGVVEVACGSYHVAVLTNAGE-------------------------- 555

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+   KV  L +  ++R  +  V CGS FT AI +H
Sbjct: 556 VYTWGKGTNGRLGHGDIADR---KVPTLVEALKDRSVK-RVACGSSFTAAICQH 605



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 123/339 (36%), Gaps = 102/339 (30%)

Query: 91  GKVFSWG--------RGSSGQLGH--GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
           G ++ WG        R  S +  +  G   D L PKP+         +++++ G  H+  
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLE--SNVMLDVSYVACGVKHAAL 277

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V+    +FT G+   G+LGHG   +   P  V S    NV  IACG  H+          
Sbjct: 278 VTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHT---------- 327

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                                                  ++A GD          LYTWG
Sbjct: 328 -------------------------------------CAVTATGD----------LYTWG 340

Query: 261 RGFNSTSDV----NCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            G ++   +    N    +P  +S        S  + G  H  ++T  G++   G    G
Sbjct: 341 DGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFG 400

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
           +L    R S + P     ++V +L G++ I ++ G  H+A V          IIS +   
Sbjct: 401 VLGHGNRASCSYP-----KEVESLKGLRTISVSCGVWHTAAVVE-------VIISQSN-- 446

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                   A +  + TWG G+  +LG G+   ++ P  V
Sbjct: 447 --------ASSGKLFTWGDGDKYRLGHGDRSSKLKPTCV 477


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 2992 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3045

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GK+FSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3046 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3103

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3104 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3160

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3161 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3218

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3219 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3278

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3279 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3327



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 29/331 (8%)

Query: 54  DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+ +L+S + V + A   G H LAL++      G+VFSWG G  G+LGHG+ V 
Sbjct: 457 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 511

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 512 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 571

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 628

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L        
Sbjct: 629 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 688

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  R++   P ++       LD   ++ I
Sbjct: 689 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP-----GLDTKHIVGI 743

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           A G   S   +    W   +R+ F++   P 
Sbjct: 744 ACGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 774



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 4028 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4080

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G LFT G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 4081 GAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4140

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4141 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4195

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4196 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4255

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4256 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4294



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G +F
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLF 4094

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4095 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4154

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4155 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4211

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4212 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4255



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
           +V+SWG G  G+LG G       P+L+  S+LS       V  +ACG  +  A+T+    
Sbjct: 492 EVFSWGCGDGGRLGHGDTVPLEEPKLI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 546

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 547 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 604

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + ++ ++ CG + S+ L KD    QVY +G G
Sbjct: 605 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 661

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 662 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 711



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4147 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4201

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4202 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4259

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4260 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4295



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3990

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3991 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4047

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L  IE+V I+A G  SA ++A G L+TWG+      
Sbjct: 4048 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4104

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 4105 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4164

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4165 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4219

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4220 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4279

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4280 QGKKINR-----VACGSAHTLAWS 4298



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 68/298 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
           +G +G   Y + S P++     +  V QIAC  +  L+L ++    +VY   + S   G 
Sbjct: 405 WGLIGWKYYANVSGPIQCEGLASLGVVQIACAEKRFLILSRN---GRVYTQAYNSDTLG- 460

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
                        PQ+   L    IV I+A+ D     ALSA G +++WG       G  
Sbjct: 461 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 507

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ L S+LS  QA       A G  +   +T +GE+   G  ++G L      
Sbjct: 508 DTVPLEEPK-LISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 566

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KVI ++ G+  +  +                         +
Sbjct: 567 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTL------------------------AV 597

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 598 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 651



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 144/409 (35%), Gaps = 101/409 (24%)

Query: 86   SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
            ++ I  KVF WG     QLG             E + AL                     
Sbjct: 2934 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2993

Query: 114  ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
                                  P+ +T    +      + +G  H+  ++  G +F+ G+
Sbjct: 2994 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3053

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  G+LGH    +   P  + +   K +  IACG  HS  +       ++Y +G G+ G+
Sbjct: 3054 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 3110

Query: 213  LGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            LG   +  +    + +V +G H +  V   +   ++ AL+ EG +++WG       G   
Sbjct: 3111 LGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3169

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +   N PQ++   +     Q   G    L LT  G V   G   +  L     V   +P 
Sbjct: 3170 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3228

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                + V  L G K++ +A GA H   VT                          +   +
Sbjct: 3229 ----QVVEGLRGKKIVHVAVGALHCLAVT--------------------------DTGQV 3258

Query: 384  MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
              WG  +HGQ G G T     P +V  G E Q       V CGS  + A
Sbjct: 3259 YAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQK---ITRVACGSSHSVA 3303



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4250 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4308


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GK+FSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3070 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3351



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 29/331 (8%)

Query: 54  DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+ +L+S + V + A   G H LAL++      G+VFSWG G  G+LGHG+ V 
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  R++   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           A G   S   +    W   +R+ F++   P 
Sbjct: 768 ACGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 798



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 127/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 4052 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4104

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G LFT G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 4105 GAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4164

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L D+ +V +      S AL+ 
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTK 4219

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4220 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4318



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G +F
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLF 4118

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S  +  V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
           +V+SWG G  G+LG G       P+L+  S+LS       V  +ACG  +  A+T+    
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKLI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + ++ ++ CG + S+ L KD    QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 685

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4171 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTK-----SGAVYT 4225

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4284 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 68/298 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
           +G +G   Y + S P++     N  V QIAC  +  L+L ++    +VY   + S   G 
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRN---GRVYTQAYNSDTLG- 484

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
                        PQ+   L    IV I+A+ D     ALSA G +++WG       G  
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ L S+LS  QA       A G  +   +T +GE+   G  ++G L      
Sbjct: 532 DTVPLEEPK-LISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KVI ++ G+  +  +                         +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTL------------------------AV 621

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 622 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 675



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4014

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L  IE+V I+A G  SA ++A G L+TWG+      
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L  + V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4189 GCKVPM-----KIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4244 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4303

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4304 QGKKINR-----VACGSAHTLAWS 4322



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 144/409 (35%), Gaps = 101/409 (24%)

Query: 86   SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
            ++ I  KVF WG     QLG             E + AL                     
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017

Query: 114  ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
                                  P+ +T    +      + +G  H+  ++  G +F+ G+
Sbjct: 3018 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3077

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G  G+LGH    +   P  + +   K +  IACG  HS  +       ++Y +G G+ G+
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 3134

Query: 213  LGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            LG   +  +    + +V +G H +  V   +   ++ AL+ EG +++WG       G   
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +   N PQ++   +     Q   G    L LT  G V   G   +  L     V   +P 
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3252

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                + V  L G K++ +A GA H   VT                          +   +
Sbjct: 3253 ----QVVEGLRGKKIVHVAVGALHCLAVT--------------------------DTGQV 3282

Query: 384  MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
              WG  +HGQ G G T     P +V  G E Q       V CGS  + A
Sbjct: 3283 YAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQK---ITRVACGSSHSVA 3327



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4332


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 188/424 (44%), Gaps = 69/424 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VWS G   DG + +  +  D L P+ L  + +  V  +ACG  H+  +T       G+V
Sbjct: 237 EVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQ-----GEV 291

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+W   + G+LGHG  VD   PK V F       I  ++ G  H+  VS SG LFT GDG
Sbjct: 292 FTWEEEAGGRLGHGIQVDVCRPKLVEFL--ALTNIDFVACGEYHTCAVSTSGDLFTWGDG 349

Query: 154 --TFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
               G LGHG   SH  P +VS  V    V  +ACG  HS +   +    +++ FG G  
Sbjct: 350 IHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 406

Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEI-------VGISANGDRSAALSAEGHLYTWG 260
           G LG   DR  SVS P+   +  GL  +++       V I    +++   ++   L+TWG
Sbjct: 407 GVLG-HGDR-ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWG 464

Query: 261 RGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G  +       ++  LP+ +S      F+Q A G    + LT  G V  +GG+ HG L 
Sbjct: 465 DGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLG 524

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
                SS     +       L G  V +I+ G  H AV+T +                  
Sbjct: 525 -----SSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSR------------------ 561

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                     + TWG G +G+LG G+  D+  P +V   +  + R  +  + CGS FT +
Sbjct: 562 --------SEVFTWGKGSNGRLGHGDKDDRKTPTLV---EALRERHVK-SISCGSNFTSS 609

Query: 433 ISRH 436
           I  H
Sbjct: 610 ICIH 613


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 178/413 (43%), Gaps = 101/413 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG  + G+LG G   D + P+L+   +  +V  +ACG  H  A+T+      G++++
Sbjct: 175 VFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTT-----GELYT 229

Query: 96  WGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           WG G+   G LGHG       PK ++   DG    + ++S G  H+  ++  G LFT GD
Sbjct: 230 WGDGTHNVGLLGHGTDAGHWIPKRISGALDG--LPVAYVSCGTWHTALITSMGQLFTFGD 287

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G+FG LGHG+  S S P +V S        +ACG+ H+  +                   
Sbjct: 288 GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAI------------------- 328

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------F 263
                                 +E++   ++   SA     G L+TWG G          
Sbjct: 329 ----------------------VEVIVTHSSSSVSA-----GKLFTWGDGDKHRLGHGDK 361

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            S     C  SL     F + A G +  + LT  G+VL +G S +G L +P   S  R  
Sbjct: 362 ESRLKPTCVASLI-DYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN--SDGRLP 418

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  ++++   G  V+Q+A G+ H AV+TG+                            +
Sbjct: 419 CLVEDRIA---GEHVLQVACGSYHVAVLTGR--------------------------SEV 449

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 450 FTWGKGANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 498



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  +          +ACG +  + LT+      GKV 
Sbjct: 344 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 398

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S G    GQLG+    D   P  V       + +  ++ G  H   ++    +FT G G 
Sbjct: 399 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 456

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G+LGHGD      P +V +  ++ V  IACG   +  +   CL   V G
Sbjct: 457 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 503


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 14/196 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V SWG   +GQLG G   D L PQ +       V M+A G  H  A+T       G ++
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTED-----GDLY 192

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V+  +G +  +  ++ GW H+  VSDSG L+T G   
Sbjct: 193 GWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVL--VACGWRHTITVSDSGNLYTYGWSK 250

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGHGD+  H  P KV +  +  + QI+ G RH++ L  +    ++YG+G  K GQ+G
Sbjct: 251 YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE---GKLYGWGWNKFGQVG 307

Query: 215 VSKDRIRS----VSLP 226
           V  +   S    VS P
Sbjct: 308 VGNNDDHSSPGQVSFP 323



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 133/272 (48%), Gaps = 21/272 (7%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
           +++I  A       E+E QV   +SWG G  G+LG G   D  +PQ +       +  +A
Sbjct: 68  TSVICGADHTTAYSEDELQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124

Query: 74  CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
           CG +H LA+T     + G+V SWGR  +GQLG G   D+L P+ +  F+     +  I+A
Sbjct: 125 CGDSHCLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFE--SVCVKMIAA 177

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  H+  V++ G L+  G G +G LG GD      P KVSS   + +  +ACG RH++ +
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV 237

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                GN +Y +G  K GQLG          +P     L D  I  IS     + AL++E
Sbjct: 238 SDS--GN-LYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 254 GHLYTWGRGFNSTSDV----NCPQSLPSSLSF 281
           G LY W  G+N    V    N   S P  +SF
Sbjct: 293 GKLYGW--GWNKFGQVGVGNNDDHSSPGQVSF 322



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 157/354 (44%), Gaps = 56/354 (15%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           +V +++ G +H +AL     + G  + SWGRG  GQLGHG+  D L P  ++ FD     
Sbjct: 14  TVVLVSAGASHSVAL-----LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAP--A 66

Query: 128 ITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           IT +  G +H + +  D   +++ G G FG+LGHG+     +P  V +     + QIACG
Sbjct: 67  ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             H L +    +  +V  +G  + GQLG+  ++D +    LPQ       + +  I+A  
Sbjct: 127 DSHCLAV---TMAGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFESVCVKMIAAGA 179

Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
           + +AA++ +G LY WG       G    +D   P+ + S         A GW H + ++ 
Sbjct: 180 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            G +   G S +G L   +      P      KV  L    + QI+ G  H+  +T    
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVP-----HKVEALKDSTISQISGGWRHTMALT---- 290

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                                +E + +  WGW + GQ+G+GN  D   P  V+ 
Sbjct: 291 ---------------------SEGK-LYGWGWNKFGQVGVGNNDDHSSPGQVSF 322



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 151/331 (45%), Gaps = 25/331 (7%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           SWG G DGQLG G   D L P +L+     +++ + CG  H  A +        +V+SWG
Sbjct: 36  SWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDEL----QVYSWG 91

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG   D   P+PV    G +  I  I+ G +H   V+ +G + + G    GQ
Sbjct: 92  WGDFGRLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 149

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-- 215
           LG G       P K+ +F +  V  IA G  H+  + +D     +YG+G G+ G LG+  
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
             DR+    LP+    +   ++V ++     +  +S  G+LYT+G       G     D 
Sbjct: 207 RNDRL----LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  + +    + SQ + GW H + LT +G++   G +  G +        + P  V+ 
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322

Query: 328 EKVSNLDGVKVIQIAAGA--EHSAVVTGKFH 356
               NL G   ++  +G   E   ++ G+ H
Sbjct: 323 PGSENLPGCMRMEAHSGPLREEKCLLLGEGH 353


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 163/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT+      
Sbjct: 1847 KVYACGEATNGRLGLG-VSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTA-----D 1900

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH    +   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 1901 GKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRR--IRDIACGSSHSAALTSSGELYTW 1958

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   V   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 1959 GLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL---VFSWGDG 2015

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2016 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2073

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2074 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 2133

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       V T   H   LF  +  P 
Sbjct: 2134 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 2182



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 2883 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 2935

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 2936 GAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 2995

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L +D   + V+ +G G  G+LG  +       +P     L  +  V +      S AL+ 
Sbjct: 2996 LTED---DTVWSWGDGDYGKLG--RGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTK 3050

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3051 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3110

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 3111 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 3149



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGGLY 2949

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  +++   +++ GDG 
Sbjct: 2950 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGD 3009

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+KV +       ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3010 YGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3066

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3067 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3110



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 9/157 (5%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VWSWG G  G+LG G       P  ++ L+ L +V +  CG    +ALT       G V+
Sbjct: 3002 VWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKV-ECGSQFSVALTK-----SGAVY 3055

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD  
Sbjct: 3056 TWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDND 3113

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
             GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 3114 EGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3150



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 154/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G V+ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPA--QLIGGEQTLFAVTADGKLYAT 2845

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 2846 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 2902

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 2903 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRL 2959

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 2960 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSD 3019

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     KV  L G+  +++  G++ S  +T        GK  + RL   S     
Sbjct: 3020 GCKVPM-----KVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3074

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 3075 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 3134

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 3135 QGKKVNR-----VACGSAHTLAWS 3153



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 135/341 (39%), Gaps = 59/341 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF-VSDS 144
            ++ I  KVF WG     QLG  +      P   +F +          AG + S F V+  
Sbjct: 1789 AATIRTKVFVWGLNDKDQLGGLKGSKIKVP---SFSETLSALNAVQVAGGSKSLFAVTVE 1845

Query: 145  GCLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            G ++ CG+ T G+LG G   S + PV      +SS+V K V  +  G RH+  L  D   
Sbjct: 1846 GKVYACGEATNGRLGLG-VSSGTVPVPRQVTALSSYVVKKV-AVHSGGRHATALTAD--- 1900

Query: 200  NQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
             +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYT
Sbjct: 1901 GKVFSWGEGDDGKLGHFSR---XNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYT 1957

Query: 259  WGRGFNST--SDVNCPQSLPSSLSF------SQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            WG G         N  Q  P  +         Q A G      L LT +G V   G    
Sbjct: 1958 WGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDF 2017

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L          P     + +  L+G  V QI  GA+ S  +T                
Sbjct: 2018 GKLGRGGSEGCNVP-----QNIERLNGQGVCQIECGAQFSLALT---------------- 2056

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      ++  + TWG G++ +LG G+      P+VV 
Sbjct: 2057 ----------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 2087



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 48/226 (21%)

Query: 198  LGNQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGH 255
            +  +V+ +G   + QLG +   +I+  S  +    L+ +++ G    G +S  A++ EG 
Sbjct: 1792 IRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAG----GSKSLFAVTVEGK 1847

Query: 256  LYTWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLG 304
            +Y  G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G
Sbjct: 1848 VYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWG 1907

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
                G L    R +  +P       +  L   ++  IA G+ HSA +T            
Sbjct: 1908 EGDDGKLGHFSRXNCDKP-----RLIEALKSRRIRDIACGSSHSAALTSSGE-------- 1954

Query: 365  YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                              + TWG GE+G+LG G+   Q+ PK+V +
Sbjct: 1955 ------------------LYTWGLGEYGRLGHGDNTTQLKPKMVKV 1982



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 3105 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 3163


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 191/425 (44%), Gaps = 71/425 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW+ G   DG      +  D L+P+ L  + +  V  + CG  HV  +T       G+V
Sbjct: 227 EVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTR-----QGEV 281

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG    G+LGHG  VD   PK V F       I  ++ G  H+  VS SG LF+ GDG
Sbjct: 282 FTWGEEVGGRLGHGIQVDISRPKLVEFL--ALTNIDFVACGEYHTCVVSTSGDLFSWGDG 339

Query: 154 --TFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
               G LGHG   SH  P +VS  +    V  +ACG  HS +   +    +++ FG G  
Sbjct: 340 IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 396

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----------GDRSAALSAEGHLYTW 259
           G LG       SVS P+    L+ ++ V ++ +           G  + ++S+   L+TW
Sbjct: 397 GVLGHGNRE--SVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSR-KLFTW 453

Query: 260 GRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G G  +       ++  LP+ +S      F + A G    + LT  G V  +GG+ HG L
Sbjct: 454 GDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQL 513

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
            +   +S  +   +  ++   L G  V +IA GA H AV+T +                 
Sbjct: 514 GNS--ISDGKLPCLVQDR---LVGEFVEEIACGAHHVAVLTSRSE--------------- 553

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                      + TWG G +G+LG G+T D+  P +V   +  ++R  +  + CGS FT 
Sbjct: 554 -----------VFTWGKGANGRLGHGDTEDKRTPTLV---EALRDRHVK-SLSCGSNFTS 598

Query: 432 AISRH 436
           +I  H
Sbjct: 599 SICIH 603



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 22/193 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   +ACG    +ALT+      G VF
Sbjct: 449 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT-----SGHVF 503

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G  + GQLG+    G++   +  + V  F      +  I+ G +H   ++    +FT 
Sbjct: 504 TMGGTAHGQLGNSISDGKLPCLVQDRLVGEF------VEEIACGAHHVAVLTSRSEVFTW 557

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FG 206
           G G  G+LGHGD     +P  V +  +++V  ++CG   +  +   C+   V G      
Sbjct: 558 GKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI---CIHKWVSGADQSIC 614

Query: 207 SGKRGQLGVSKDR 219
           SG R   G ++ R
Sbjct: 615 SGCRQAFGFTRKR 627



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 135/356 (37%), Gaps = 90/356 (25%)

Query: 91  GKVFSWGRG-SSGQLGHGEM------VDALYPKPV---TFFDGHRYTITHISAGWNHSGF 140
           G V+ WG   + G L  G         D L P+P+      D H+     I  G  H   
Sbjct: 220 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQ-----IVCGVRHVAL 274

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V+  G +FT G+   G+LGHG     S P  V      N+  +ACG  H+ V+       
Sbjct: 275 VTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVV---STSG 331

Query: 201 QVYGFGSG--KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
            ++ +G G    G LG   D I      +V+  L  ++++ ++     SA  +A G L+T
Sbjct: 332 DLFSWGDGIHNVGLLGHGSD-ISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFT 390

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           +                                    GDG   +LG  +   +S P+ V 
Sbjct: 391 F------------------------------------GDGAFGVLGHGNRESVSYPKEVQ 414

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           S             L+G+K +++A    H+A +      V +   + T            
Sbjct: 415 S-------------LNGLKTVKVACSIWHTAAI------VEVMGQTATSM---------- 445

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +R + TWG G+  +LG GN    + P  V+   ++       ++ CG  FT A++
Sbjct: 446 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH----KIACGHTFTVALT 497


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 177/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   ++S+V  +ACG  H  A+T+      G ++
Sbjct: 275 EVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFHTCAVTA-----SGDLY 329

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  + G LG+G       PK V+   +G    +  +S G  HS   + SG +FT G
Sbjct: 330 TWGDGYYNVGLLGNGAGASHWLPKRVSGPLEG--VQVLSVSCGSWHSALTTSSGKVFTFG 387

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHG   +   P +V +       ++ACG+ HS  +++       + +  ++Y 
Sbjct: 388 DGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYT 447

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G+G + QLG                            +GD+ + L              
Sbjct: 448 WGAGDKNQLG----------------------------HGDKDSRLVP------------ 467

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C QSL    SF Q A G +  + L+  G V  +G S +G L +P +    +P+ 
Sbjct: 468 -----TCVQSL-IDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNP-KSDGKQPIP 520

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V       L G  V +I+ G+ H AV+T +                            + 
Sbjct: 521 VQ----DRLSGELVEEISCGSCHVAVLTSRSE--------------------------VY 550

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G   D+  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 551 TWGMGANGRLGHGGVEDKKKPTLV---EALKDRHVK-SIACGSNFTTCICIH 598



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 86/190 (45%), Gaps = 16/190 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WGAG   QLG G     L P  +      S   +ACG +  +AL++      G VF
Sbjct: 444 KLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALST-----SGHVF 498

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + G  S+GQLG+ +  D   P PV     G    +  IS G  H   ++    ++T G G
Sbjct: 499 TMGSSSNGQLGNPKS-DGKQPIPVQDRLSGE--LVEEISCGSCHVAVLTSRSEVYTWGMG 555

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGK 209
             G+LGHG       P  V +  +++V  IACG   +  +   C+   V G      SG 
Sbjct: 556 ANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI---CIHKWVSGADQSVCSGC 612

Query: 210 RGQLGVSKDR 219
           R   G ++ R
Sbjct: 613 RQPFGFTRKR 622


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 176/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   SL+ V +++CG  H  A+T+      G +F
Sbjct: 276 EVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTT-----SGDLF 330

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG GS   G LG G  V    PK V+   +G    +  ++ G  HS   + SG L+T G
Sbjct: 331 NWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG--LQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  + + P +V +       ++ACG+ HS  +++       + +  ++Y 
Sbjct: 389 DGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYT 448

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GD+   L  +           
Sbjct: 449 WGDGDKNRLG----------------------------HGDKEPRLVPK----------- 469

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C Q+L    +F Q A G N  + L   G V  +G S +G L +P +    +P  
Sbjct: 470 ------CVQAL-LEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNP-KSDGKQPCL 521

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V     S L    V +I+ GA H  V+T +                            + 
Sbjct: 522 VQDRLASEL----VEEISCGASHVTVLTSR--------------------------SEVY 551

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 552 TWGMGANGRLGHGDLKDRKKPCLV---EALKDRHVK-SISCGSNFTTCICIH 599



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 131/353 (37%), Gaps = 84/353 (23%)

Query: 91  GKVFSWGR---GSSGQLGHGE----MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           G V+ WG      +   GH       VD L PKP+         +  I+ G  H    + 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLE--SDVVLDVNQIACGTRHVALTTR 273

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL-VLLKDCLGNQV 202
            G +FT G+   G+LGHG     S P  V S     V  I+CG  H+  V     L N  
Sbjct: 274 QGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFN-- 331

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           +G GS   G LG   +   S  LP+   G L  ++++ ++     SA  ++ G LYT+  
Sbjct: 332 WGDGSYNVGLLGCGTE--VSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTF-- 387

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
                                             GDG   +LG      L+ P+ V +  
Sbjct: 388 ----------------------------------GDGTFGVLGHGDRETLAYPKEVEA-- 411

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
                      L G K I++A G  HSA +    +     ++S                +
Sbjct: 412 -----------LSGFKTIKVACGIWHSAAIVEVTNQTGANVMS----------------K 444

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            + TWG G+  +LG G+   ++ PK V    E+       ++ CG   T A++
Sbjct: 445 KLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH----QLACGHNMTVALA 493


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 178/413 (43%), Gaps = 101/413 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG  + G+LG G   D + P+L+   +  +V  +ACG  H  A+T+      G++++
Sbjct: 98  VFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTT-----GELYT 152

Query: 96  WGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           WG G+   G LGHG       PK ++   DG    + ++S G  H+  ++  G LFT GD
Sbjct: 153 WGDGTHNVGLLGHGTDAGHWIPKRISGALDG--LPVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G+FG LGHG+  S S P +V S        +ACG+ H+  +                   
Sbjct: 211 GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAI------------------- 251

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------F 263
                                 +E++   ++   SA     G L+TWG G          
Sbjct: 252 ----------------------VEVIVTHSSSSVSA-----GKLFTWGDGDKHRLGHGDK 284

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            S     C  SL     F + A G +  + LT  G+VL +G S +G L +P   S  R  
Sbjct: 285 ESRLKPTCVASLI-DYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN--SDGRLP 341

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  ++++   G  V+Q+A G+ H AV+TG+                            +
Sbjct: 342 CLVEDRIA---GEHVLQVACGSYHVAVLTGR--------------------------SEV 372

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 421



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  +          +ACG +  + LT+      GKV 
Sbjct: 267 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 321

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S G    GQLG+    D   P  V       + +  ++ G  H   ++    +FT G G 
Sbjct: 322 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 379

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G+LGHGD      P +V +  ++ V  IACG   +  +   CL   V G
Sbjct: 380 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 426


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 183/427 (42%), Gaps = 52/427 (12%)

Query: 24  IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
           I   E +Q+  +V+ WG       G    +  L+PQ +++    S++ +ACGG H+L L+
Sbjct: 201 IASMELDQKCARVFLWGRPP----GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLS 256

Query: 84  SPSSVIGGKVFSWGRGS-SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
           S   V   +  +      +  L   ++V  L  +       HR  I HI+ G  HS  ++
Sbjct: 257 SAGDVYSSEDHAISTTEPTNMLQTPQLVKELTLEKAL----HRRPIIHIACGAKHSVALT 312

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
            +G +++ G G  G+LGHG+ R  + P K+ + +   +  ++CG  H+ V+      N V
Sbjct: 313 SAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQ---NLV 369

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
           + FG G+ G+LG+   +         T G     I+ +    + + ALS EG +++WG+ 
Sbjct: 370 FTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQ 429

Query: 262 -------GFNSTSDVN-CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                  GF    +++ C             A G+ H L LT   EVL  G   +G L  
Sbjct: 430 SEGQCGLGFCDQDELSPCLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGR 489

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
              V    P S+  + +   +G    +I  GA HS +  G                    
Sbjct: 490 G-IVYQPSPESID-QSLFACEGGHPQRIYCGAFHSIITAG-------------------- 527

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
                 ++ +  WG   +G  GLG+T ++  P+     D F N DT + + CG  +T A+
Sbjct: 528 ------SKILYAWGLNSYGACGLGHTLNRDIPE---RNDFFANIDTDVVLCCGHKYTIAL 578

Query: 434 SRHCLPS 440
               +PS
Sbjct: 579 EVDKVPS 585


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 175/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   ++S+V  +ACG  H  A+T+      G ++
Sbjct: 274 EVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTA-----SGDLY 328

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG GS  +G LGHG       PK V+   +G    +  ++ G  HS     SG +FT G
Sbjct: 329 NWGDGSYNAGLLGHGIGASHWLPKRVSGPLEG--LQVLSVACGSWHSALAMSSGKVFTFG 386

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHG+  + + P +V S       ++ACG+ HS  +++       + +  +++ 
Sbjct: 387 DGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFT 446

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG      R V  P V   L D                              
Sbjct: 447 WGDGDKNRLGHGDKEARLV--PTVVQALVDN----------------------------- 475

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                          +F Q A G++  + L   G V  +G S++G L +P +    +P  
Sbjct: 476 ---------------NFHQVACGYSMTIALATSGHVFTMGSSNYGQLGNP-KADGKQPCQ 519

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V  +  S L    V +I+ G+ H AV+T +                            + 
Sbjct: 520 VQDKLSSEL----VEEISCGSYHVAVLTSRSE--------------------------VY 549

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G   D+  P +V   D  ++R  +  + CGS FT  I  H
Sbjct: 550 TWGMGANGRLGHGGIEDKKKPTIV---DALKDRHVK-SIACGSNFTTCICIH 597



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 16/190 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P ++     ++   +ACG +  +AL +      G VF
Sbjct: 443 KLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALAT-----SGHVF 497

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + G  + GQLG+ +   A   +P    D      +  IS G  H   ++    ++T G G
Sbjct: 498 TMGSSNYGQLGNPK---ADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMG 554

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGK 209
             G+LGHG       P  V +  +++V  IACG   +  +   C+   V G      SG 
Sbjct: 555 ANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCI---CIHKWVSGADQSVCSGC 611

Query: 210 RGQLGVSKDR 219
           R   G ++ R
Sbjct: 612 RQPFGFTRKR 621



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 130/364 (35%), Gaps = 106/364 (29%)

Query: 91  GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
           G V+ WG          GSS  +      D L PKP+      D     +  IS G  H 
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVC--SKTDVLIPKPLESDVVLD-----VQQISCGSRHI 266

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
              +  G +FT G+   G+LGHG     S P  V S    NV  IACG  H+  +     
Sbjct: 267 ALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVT---A 323

Query: 199 GNQVYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
              +Y +G G          +G S    + VS P     L  ++++ ++     SA   +
Sbjct: 324 SGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGP-----LEGLQVLSVACGSWHSALAMS 378

Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G ++T+                                    GDG    LG  +   ++
Sbjct: 379 SGKVFTF------------------------------------GDGTFGALGHGNRENVA 402

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
            P+ V S             L G + +++A G  HSA +        + ++S        
Sbjct: 403 YPKEVES-------------LSGFRTMKVACGVWHSAAIVETTSQTGVNMVS-------- 441

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFT 430
                   R + TWG G+  +LG G+   ++ P VV   + + F       +V CG   T
Sbjct: 442 --------RKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFH------QVACGYSMT 487

Query: 431 YAIS 434
            A++
Sbjct: 488 IALA 491


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 191/425 (44%), Gaps = 71/425 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW+ G   DG      +  D L+P+ L  + +  V  + CG  HV  +T       G+V
Sbjct: 218 EVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTR-----QGEV 272

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG    G+LGHG  VD   PK V F       I  ++ G  H+  VS SG LF+ GDG
Sbjct: 273 FTWGEEVGGRLGHGIQVDISRPKLVEFL--ALTNIDFVACGEYHTCVVSTSGDLFSWGDG 330

Query: 154 --TFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
               G LGHG   SH  P +VS  +    V  +ACG  HS +   +    +++ FG G  
Sbjct: 331 IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 387

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----------GDRSAALSAEGHLYTW 259
           G LG       SVS P+    L+ ++ V ++ +           G  + ++S+   L+TW
Sbjct: 388 GVLGHGNRE--SVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSR-KLFTW 444

Query: 260 GRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G G  +       ++  LP+ +S      F + A G    + LT  G V  +GG+ HG L
Sbjct: 445 GDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQL 504

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
            +   +S  +   +  ++   L G  V +IA GA H AV+T +                 
Sbjct: 505 GN--SISDGKLPCLVQDR---LVGEFVEEIACGAHHVAVLTSRSE--------------- 544

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                      + TWG G +G+LG G+T D+  P +V   +  ++R  +  + CGS FT 
Sbjct: 545 -----------VFTWGKGANGRLGHGDTEDKRTPTLV---EALRDRHVK-SLSCGSNFTS 589

Query: 432 AISRH 436
           +I  H
Sbjct: 590 SICIH 594



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 22/193 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   +ACG    +ALT+      G VF
Sbjct: 440 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT-----SGHVF 494

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G  + GQLG+    G++   +  + V  F      +  I+ G +H   ++    +FT 
Sbjct: 495 TMGGTAHGQLGNSISDGKLPCLVQDRLVGEF------VEEIACGAHHVAVLTSRSEVFTW 548

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FG 206
           G G  G+LGHGD     +P  V +  +++V  ++CG   +  +   C+   V G      
Sbjct: 549 GKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI---CIHKWVSGADQSIC 605

Query: 207 SGKRGQLGVSKDR 219
           SG R   G ++ R
Sbjct: 606 SGCRQAFGFTRKR 618



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 135/356 (37%), Gaps = 90/356 (25%)

Query: 91  GKVFSWGRG-SSGQLGHGEM------VDALYPKPV---TFFDGHRYTITHISAGWNHSGF 140
           G V+ WG   + G L  G         D L P+P+      D H+     I  G  H   
Sbjct: 211 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQ-----IVCGVRHVAL 265

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V+  G +FT G+   G+LGHG     S P  V      N+  +ACG  H+ V+       
Sbjct: 266 VTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVV---STSG 322

Query: 201 QVYGFGSG--KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
            ++ +G G    G LG   D I      +V+  L  ++++ ++     SA  +A G L+T
Sbjct: 323 DLFSWGDGIHNVGLLGHGSD-ISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFT 381

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           +                                    GDG   +LG  +   +S P+ V 
Sbjct: 382 F------------------------------------GDGAFGVLGHGNRESVSYPKEVQ 405

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           S             L+G+K +++A    H+A +      V +   + T            
Sbjct: 406 S-------------LNGLKTVKVACSIWHTAAI------VEVMGQTATSM---------- 436

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +R + TWG G+  +LG GN    + P  V+   ++       ++ CG  FT A++
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH----KIACGHTFTVALT 488


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 187/411 (45%), Gaps = 69/411 (16%)

Query: 48  GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
           G G   D L P+ L  + +  V  +ACGG H   +T       G++FSWG  S G+LGHG
Sbjct: 313 GLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQ-----GEIFSWGEESGGRLGHG 367

Query: 108 EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRS 165
              D L+PK +         I  ++ G  H+  V+ SG L+T G+G   +G LGHG+  S
Sbjct: 368 VDSDVLHPKLIDALSN--TNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVS 425

Query: 166 HSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           H  P +V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR +SVS
Sbjct: 426 HWVPKRVNGPLEGIHVSYISCGPWHTAVVTS---AGQLFTFGDGTFGALG-HGDR-KSVS 480

Query: 225 LPQVTIGLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNSTSDVNCP 272
           LP+    L  +  +  S     +AA+             + G L+TWG G          
Sbjct: 481 LPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 540

Query: 273 QS--LPSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           ++  +P+ ++     F Q A G +  + LT  G V  +G   +G L +P+      P  V
Sbjct: 541 EAKLVPTCVALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQ-ADGKLPTRV 599

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
             + + +     V +IA GA H AV+T +                            + T
Sbjct: 600 EGKLLKSF----VEEIACGAYHVAVLTLR--------------------------NEVYT 629

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           WG G +G+LG G+T D+ +P +V   D  +++  +  + CG+ FT AI  H
Sbjct: 630 WGKGANGRLGHGDTDDRNNPTLV---DALKDKHVK-SIACGTNFTAAICLH 676



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 160/337 (47%), Gaps = 35/337 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D L P+L++  S +++ ++ACG  H  A+T     + G ++
Sbjct: 352 EIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVT-----LSGDLY 406

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    +++IS G  H+  V+ +G LFT G
Sbjct: 407 TWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFG 464

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD +S S P +V S       + +CG+ H+  +++  +GN         ++
Sbjct: 465 DGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKL 524

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      +   L    + L +     ++     + AL+  GH+Y     
Sbjct: 525 FTWGDGDKGRLGHGD---KEAKLVPTCVALVEHNFCQVACGHSLTVALTTSGHVYAMGSP 581

Query: 259 -WGRGFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N  +D   P  +   L  SF  + A G  HV VLT   EV   G   +G L   
Sbjct: 582 VYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHG 641

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +      P       V  L    V  IA G   +A +
Sbjct: 642 DTDDRNNPT-----LVDALKDKHVKSIACGTNFTAAI 673


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 180/407 (44%), Gaps = 87/407 (21%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  T G+LG G   D   P+L+   + ++V ++ACG  H  A+T     + G+++
Sbjct: 296 EVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVT-----MDGELY 350

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  ++G LG+G  V    PK ++   +G    + +++ G  H+  +S +G LFT G
Sbjct: 351 TWGDGVHNAGLLGNGTDVSHWMPKRISGILEG--LQVAYVACGPWHTALISSTGQLFTFG 408

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD +S S P +V S        +ACG+ H+  +++  +        SGK  
Sbjct: 409 DGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGK-- 466

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
                            T G  D   +G   +GD+   L                     
Sbjct: 467 ---------------LFTWGDGDKNRLG---HGDKEPRLK-------------------- 488

Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  +P+    +F + A G +  + LT  G+V  +G S +G L +P      +P  V    
Sbjct: 489 PTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPH-ADGKQPCLVE--- 544

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
              L G    ++A GA H  V+T K                            + TWG G
Sbjct: 545 -DKLLGESAEEVACGAYHVMVLTSK--------------------------NEVYTWGKG 577

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G+  D+  P +V   +  +++  ++ + CGS ++ AI  H
Sbjct: 578 ANGRLGHGDVEDRKSPTLV---ESLKDKHVKI-IACGSNYSAAICLH 620


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 183/414 (44%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   +  ++  +ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    P+ ++   +G    + ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGALEG--LQVAYVSCGTWHTALITSMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FG LGHG+ +S S P +V S        +ACG+ H+  +                  
Sbjct: 210 DGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
                                  +E++       +S+A  + G L+TWG G         
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +  +  C  SL     F + A G +  + LT  G+V  +G S +G L +P   S  RP
Sbjct: 284 KEARLNPTCVASLI-DYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPN--SDGRP 340

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             V  +K++N     V+Q+A G+ H +V+T +                            
Sbjct: 341 CLVG-DKITN---EHVLQVACGSYHVSVLTSRSE-------------------------- 370

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  DQ   KV  L +  ++R  +  + CG+ FT AI  H
Sbjct: 371 VFTWGKGANGRLGHGDIEDQ---KVPTLVEALKDRSVR-HIACGANFTAAICLH 420


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 152/327 (46%), Gaps = 28/327 (8%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + ++ WG+   G+LG G + +E  ++P+ ++ S  ++V   ACGG+H L LT       G
Sbjct: 1   MALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTK-----DG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTC 150
           K+++ G    GQLGH    + L  K   F      Y +T +S G +HS  +++ G LF+ 
Sbjct: 56  KLYTCGNNDHGQLGHD--TNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSW 113

Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           G    GQLGH  D  S+ +P  + S   K V QI+CG  H L L       +++ +G+ +
Sbjct: 114 GSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN---SGELFAWGANE 170

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG+     + V    +   L  I I  I+  G+ S A+S  G ++ WG+      G 
Sbjct: 171 YGQLGLGTTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N       P  L +  SL     + G +  + LT +G V   G    G L      +   
Sbjct: 230 NDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEIL 289

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
           P       V  L G K+ QIA G +H+
Sbjct: 290 P-----RMVFELMGSKITQIACGRKHT 311



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 10/162 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WGA   GQLG G    ++ P    + SL+   ++ +ACGG H  A++       G 
Sbjct: 162 ELFAWGANEYGQLGLGTTGKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSK-----SGA 215

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WG+ + GQLG  ++    YP  +         + +IS G + S F++  G +FTCG 
Sbjct: 216 IFGWGKNTFGQLGLNDLDSRCYPTQLKTL--RSLGVRYISCGDDFSVFLTQEGGVFTCGL 273

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           GTFGQLGHG + +   P  V   +   + QIACG +H+L  +
Sbjct: 274 GTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFV 315



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 132/326 (40%), Gaps = 45/326 (13%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++ WG    G+LG G + +     P          +   + G +H+  ++  G L+TCG+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH  +   +  P  +S+  N  V Q++CG+ HSL L       Q++ +GS   G
Sbjct: 63  NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTN---WGQLFSWGSNATG 119

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG   D + S   P++   +    +V IS       AL+  G L+ WG       G  +
Sbjct: 120 QLGHDLDMV-SYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           T       +L  SL+    +  A G NH   ++  G +   G +  G L   +  S   P
Sbjct: 179 TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYP 238

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                 ++  L  + V  I+ G + S  +T                          +   
Sbjct: 239 -----TQLKTLRSLGVRYISCGDDFSVFLT--------------------------QEGG 267

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           + T G G  GQLG G   ++I P++V
Sbjct: 268 VFTCGLGTFGQLGHGTHGNEILPRMV 293


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 173/383 (45%), Gaps = 54/383 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+W+WG   DGQLG G    + +P  + +++L++++ + CGG H +AL S      G+V+
Sbjct: 175 KLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDS-----LGRVW 229

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    G+LG G   +     PV     +   I  ISAG  +S  +S  G + T G  +
Sbjct: 230 AWGYNGDGELGGG-TTENNSNVPVPVPVPNLTDIIAISAGGEYSIALSSDGSVLTWGANS 288

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG+G+   +S P K+SS     +  I+ G  HSL + +D     VY +G    GQ+G
Sbjct: 289 DGQLGNGNTDQNSVPTKISSL--PLMKGISAGEAHSLAVTEDGF---VYAWGLNDEGQIG 343

Query: 215 VSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
             +    +  L  V + GL DI+ V   A    S AL  +G ++ WG       G  + +
Sbjct: 344 NGEKSADNPVLNPVQVQGLTDIDAV--CAGATFSLALGIDGRVWAWGLNDEGQLGDGTNT 401

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           +   P  + +    S  A G +H L +  +G+V   G +  G L D    SS+ PL V  
Sbjct: 402 NSTTPVEVTNLAKISAVACGSDHSLAIR-NGKVKSWGLNDEGQLGDGSTRSSSAPLDVT- 459

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
             +S+     ++ +AAG  HS  +T K +                          I  WG
Sbjct: 460 -GLSD-----IVYVAAGESHSLAITSKGN--------------------------IYVWG 487

Query: 388 WGEHGQLGLGNTCDQIHPKVVNL 410
               GQLG G       PK ++L
Sbjct: 488 LNGDGQLGDGTNRSSRTPKTIDL 510



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 132/312 (42%), Gaps = 50/312 (16%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            IS GW+HS  +   G L+  G    GQLG G   S ++PV V       +  + CG  H
Sbjct: 159 QISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDH 218

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQL-GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           S+ L  D LG +V+ +G    G+L G + +   +V +P     L D  I+ ISA G+ S 
Sbjct: 219 SMAL--DSLG-RVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTD--IIAISAGGEYSI 273

Query: 249 ALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLM 302
           ALS++G + TWG        N  +D N   +  SSL   +  + G  H L +T DG V  
Sbjct: 274 ALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYA 333

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
            G +  G + + E+ S+  P+            +  +Q+    +  AV  G    + L I
Sbjct: 334 WGLNDEGQIGNGEK-SADNPV------------LNPVQVQGLTDIDAVCAGATFSLALGI 380

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQL 421
                            +  +  WG  + GQLG G   +   P +V NL           
Sbjct: 381 -----------------DGRVWAWGLNDEGQLGDGTNTNSTTPVEVTNLAKIS------- 416

Query: 422 EVFCGSGFTYAI 433
            V CGS  + AI
Sbjct: 417 AVACGSDHSLAI 428


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 170/414 (41%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG G  G+LG     D  SP++++  +   V  +ACG  H  ALT       G+V+
Sbjct: 324 EVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTD-----SGEVY 378

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG     +  L  G       P+ +    DG   +I+ ++ G  H+  VS  G LFT G
Sbjct: 379 TWGNDVCCADLLIEGRTRSQWIPQKLGGSLDG--ISISSVACGEWHTAIVSSCGRLFTYG 436

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD RS+SSP +V S     V   ACG  H+  +++                
Sbjct: 437 DGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVE---------------- 480

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------F 263
              V  DR R                             SA G L+TWG G         
Sbjct: 481 ---VMFDRFRYN---------------------------SASGKLFTWGDGDEGRLGHVD 510

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           N +  V    +      F Q + G    + LT  G+V  +G + +G L +P      R  
Sbjct: 511 NGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPH----ARDK 566

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
           +V +E     + VKVI            TG +H                 + V+    ++
Sbjct: 567 AVMVEGQLKQEFVKVIS-----------TGSYH-----------------VAVLTSGGSV 598

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            TWG GE+GQLGLG+T D+  P  V        RD Q+  + CG  FT AIS H
Sbjct: 599 YTWGRGENGQLGLGDTEDRYTPCFVEAL-----RDRQVNTITCGPSFTAAISLH 647


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 176/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   SL+ V +++CG  H  A+T+      G +F
Sbjct: 276 EVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTT-----SGDLF 330

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG GS   G LG G  V    PK V+   +G    +  ++ G  HS   + SG L+T G
Sbjct: 331 NWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG--LQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  + + P +V +       ++ACG+ HS  +++       + +  ++Y 
Sbjct: 389 DGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYT 448

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GD+   L  +           
Sbjct: 449 WGDGDKNRLG----------------------------HGDKEPRLVPK----------- 469

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C Q+L    +F Q A G N  + L   G V  +G S +G L +P +    +P  
Sbjct: 470 ------CVQALLE-YNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNP-KSDGKQPCL 521

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V     S L    V +I+ GA H  V+T +                            + 
Sbjct: 522 VQDRLASEL----VEEISCGASHVTVLTSR--------------------------SEVY 551

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 552 TWGMGANGRLGHGDLKDRKKPCLV---EALKDRHVK-SISCGSNFTTCICIH 599



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 123/327 (37%), Gaps = 77/327 (23%)

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
           VD L PKP+         +  I+ G  H    +  G +FT G+   G+LGHG     S P
Sbjct: 242 VDVLIPKPLE--SDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRP 299

Query: 170 VKVSSFVNKNVHQIACGMRHSL-VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
             V S     V  I+CG  H+  V     L N  +G GS   G LG   +   S  LP+ 
Sbjct: 300 KLVESLSLTVVDLISCGEFHTCAVTTSGDLFN--WGDGSYNVGLLGCGTE--VSYWLPKK 355

Query: 229 TIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG 287
             G L  ++++ ++     SA  ++ G LYT+                            
Sbjct: 356 VSGPLEGLQVLSVACGSWHSALTTSSGKLYTF---------------------------- 387

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
                   GDG   +LG      L+ P+ V +             L G K I++A G  H
Sbjct: 388 --------GDGTFGVLGHGDRETLAYPKEVEA-------------LSGFKTIKVACGIWH 426

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           SA +    +     ++S                + + TWG G+  +LG G+   ++ PK 
Sbjct: 427 SAAIVEVTNQTGANVMS----------------KKLYTWGDGDKNRLGHGDKEPRLVPKC 470

Query: 408 VNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           V    E+       ++ CG   T A++
Sbjct: 471 VQALLEYNFH----QLACGHNMTVALA 493


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1525

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 32/295 (10%)

Query: 35  KVWSWGAGT---DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
            VWSWG  +    G    G    E  PQ +N  ++S+V+ +ACGG+H LAL        G
Sbjct: 564 SVWSWGRNSVGQLGLGTGGTYSTENRPQKIN--AISNVAAIACGGSHSLALARD-----G 616

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
             +SWG    GQLG G+ V    P+ V         +  ++AG  HS  ++  G L++ G
Sbjct: 617 SFWSWGYNYYGQLGLGDNVSKTTPRKVNAL----SNVVAMAAGDRHSLALTLDGSLWSWG 672

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           D T+GQLG GD    ++P KV++    NV  IA G RHSL L +D     V+ +G+  RG
Sbjct: 673 DNTYGQLGLGDNDHRNTPRKVNAI--SNVVAIAAGYRHSLALTRD---GSVWSWGNNTRG 727

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------- 264
           QLG+  +  R+   P  TI      I  I+   + S A+S EG ++ WG   +       
Sbjct: 728 QLGLGDNDDRNTPQPVTTIS----NIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGT 783

Query: 265 --STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             S +D N PQ +    +    + G +H + LT DG +   G +  G ++  E +
Sbjct: 784 HGSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGALWAWGNNEAGQIAAEEAI 838



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 147/342 (42%), Gaps = 57/342 (16%)

Query: 63   LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG---HGEMVDALYPKPVT 119
            + +L   + +A G  H LAL        G V+SWG  S GQLG    G       P+ + 
Sbjct: 1029 VDALPPAAKIAAGDNHALALAPD-----GSVWSWGYNSDGQLGLGSSGTYSTKNRPQKIN 1083

Query: 120  FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
                    +  I+ G +HS  V+  G L++ G   +GQLG GD  S ++P KV++    N
Sbjct: 1084 AI----SNVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAI--SN 1137

Query: 180  VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
            V  IA G  +SL L +D     V+ +G    GQLG+  +  R+   PQ    L +  +  
Sbjct: 1138 VAAIAAGEYYSLALTRD---GSVWSWGDNSDGQLGLGDNEDRNT--PQKVEVLSN--VAA 1190

Query: 240  ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
            I+A  D S AL+ +G +++WGR      G +   D N PQ + +  +    A G +H   
Sbjct: 1191 IAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFA 1250

Query: 294  LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            ++ +G     G ++ G L            S +L   +    VKVI    G     +  G
Sbjct: 1251 ISEEGLAWAWGYNYDGQLG--------IGTSGSLANENTPQKVKVISNVVG-----LSGG 1297

Query: 354  KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
             +H + L                  E+ A+  WG  + GQ+G
Sbjct: 1298 NYHSLAL-----------------TEDGALWAWGDNDDGQIG 1322



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 160/377 (42%), Gaps = 73/377 (19%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VWSWG    GQLG G   ++      N+ +L   + +A GG H LAL S      G V+
Sbjct: 512 SVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGGHALALASD-----GSVW 566

Query: 95  SWGRGS---SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           SWGR S    G    G       P+ +         +  I+ G +HS  ++  G  ++ G
Sbjct: 567 SWGRNSVGQLGLGTGGTYSTENRPQKINAI----SNVAAIACGGSHSLALARDGSFWSWG 622

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              +GQLG GD  S ++P KV++    NV  +A G RHSL L  D     ++ +G    G
Sbjct: 623 YNYYGQLGLGDNVSKTTPRKVNAL--SNVVAMAAGDRHSLALTLD---GSLWSWGDNTYG 677

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG+  +  R+       I      +V I+A    S AL+ +G +++WG       G   
Sbjct: 678 QLGLGDNDHRNTPRKVNAIS----NVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGD 733

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL--------MLGGSHHGMLSDPERV 317
             D N PQ + +  +    A+G N+ + ++ +G V          LG   HG L+D    
Sbjct: 734 NDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLAD---- 789

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               P  V +  +SN     V+ ++AG+ HS  +T                         
Sbjct: 790 -ENTPQKVIV--ISN-----VVGLSAGSSHSIALT------------------------- 816

Query: 378 AENRAIMTWGWGEHGQL 394
            E+ A+  WG  E GQ+
Sbjct: 817 -EDGALWAWGNNEAGQI 832



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 158/389 (40%), Gaps = 65/389 (16%)

Query: 19  NAKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC 74
           NA+P +    +    +K    VW WG     QLG G   + L+P+   +  +S++  +A 
Sbjct: 67  NAEPMVASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPV--VSNIVSVAA 124

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           G    LAL S      G +++WG    GQLG G+  + L P            +  I+ G
Sbjct: 125 GRLFSLALASD-----GSLWAWGGNYYGQLGMGDNDNRLTPSKTPGL----SDVAAIAGG 175

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
             H+   + SG ++  G    GQLG  GD+    +PV+V+     NV  +A G   SL L
Sbjct: 176 DYHALAATQSGEVWAMGRNDHGQLGFTGDHAD--APVQVAGL--SNVKSVAAGEFFSLAL 231

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
             D     V+ +G+ +  QLG       +V+ P     L +I    I+A    + AL+ +
Sbjct: 232 KND---GTVWAWGNNESAQLGTGI-AGEAVATPAPIAVLSNI--TAIAAGRRHAMALAED 285

Query: 254 GHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           G ++ WG       GF        P  + S    +  A GW H L LT DG +   G + 
Sbjct: 286 GSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNG 345

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
            G L      +S + L   +  +SN      +  A G  HS                   
Sbjct: 346 DGRLG--TDATSDQSLPAQVSSISN-----AVSFAGGQRHSL------------------ 380

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGL 396
                    IA + ++ +WG   +GQLG+
Sbjct: 381 --------AIAADGSVWSWGGNAYGQLGV 401



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 146/340 (42%), Gaps = 62/340 (18%)

Query: 71   MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--VDALYPKPVTFFDGHRYTI 128
            M+A GG   LAL +      G ++SWG   +GQLG G    V+   P  V          
Sbjct: 985  MVAAGGNFSLALKTD-----GSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDAL----PPA 1035

Query: 129  THISAGWNHSGFVSDSGCLFTCGDGTFGQLG---HGDYRSHSSPVKVSSFVNKNVHQIAC 185
              I+AG NH+  ++  G +++ G  + GQLG    G Y + + P K+++    NV  IAC
Sbjct: 1036 AKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAI--SNVAAIAC 1093

Query: 186  GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            G  HSL + +D     ++ +G    GQLG+  +  ++   PQ    + +  +  I+A   
Sbjct: 1094 GGSHSLAVARD---GSLWSWGYNYYGQLGLGDNYSKTT--PQKVNAISN--VAAIAAGEY 1146

Query: 246  RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
             S AL+ +G +++WG       G     D N PQ +    + +  A G +H L LT DG 
Sbjct: 1147 YSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGS 1206

Query: 300  VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
            V   G +  G L   +      P     + V+ +  +K   IAAG  HS           
Sbjct: 1207 VWSWGRNSRGQLGLDDNDDRNTP-----QPVTTISNIKA--IAAGNSHS----------- 1248

Query: 360  LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
             F IS              E      WG+   GQLG+G +
Sbjct: 1249 -FAIS--------------EEGLAWAWGYNYDGQLGIGTS 1273



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 185/458 (40%), Gaps = 83/458 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG   DG+LGT    D+  P    +SS+S+    A G  H LA+ +      G V+S
Sbjct: 338 LWAWGNNGDGRLGTDATSDQSLPA--QVSSISNAVSFAGGQRHSLAIAAD-----GSVWS 390

Query: 96  WGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAG------W------------- 135
           WG  + GQLG   +  A    PV T + G  + + + + G      W             
Sbjct: 391 WGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIWDDDDDGDGFLDES 450

Query: 136 NHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           ++   VS+ G     GDGT  F     GD+         S   N N   +A G   SL L
Sbjct: 451 DNCPCVSNPGQEDEDGDGTGDFCDGCPGDFFKIQP--GFSGCGNPN-PMVAAGGGFSLAL 507

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
             D     V+ +G+   GQLG+       V  P     L       I+A G  + AL+++
Sbjct: 508 KTD---GSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP--LAASIAAGGGHALALASD 562

Query: 254 GHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
           G +++WGR            + S  N PQ + +  + +  A G +H L L  DG     G
Sbjct: 563 GSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLALARDGSFWSWG 622

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFH 356
            +++G L   + VS T P  V    +SN     V+ +AAG  HS  +T        G   
Sbjct: 623 YNYYGQLGLGDNVSKTTPRKV--NALSN-----VVAMAAGDRHSLALTLDGSLWSWGDNT 675

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMT--------------WGWGEH--GQLGLGNTC 400
           + +L +        P  +N I+   AI                W WG +  GQLGLG+  
Sbjct: 676 YGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDND 735

Query: 401 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 438
           D+  P+ V      +       +  G+ ++ AIS   L
Sbjct: 736 DRNTPQPVTTISNIK------AIAVGNNYSIAISEEGL 767



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 135/345 (39%), Gaps = 59/345 (17%)

Query: 71  MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
           M+A    H LAL        G V+ WGR    QLG G+ ++ L P+           I  
Sbjct: 71  MVASRLDHSLALKGD-----GTVWVWGRNDYNQLGLGDDINRLAPEQAPVV----SNIVS 121

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           ++AG   S  ++  G L+  G   +GQLG GD  +  +P K       +V  IA G  H+
Sbjct: 122 VAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGL--SDVAAIAGGDYHA 179

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           L   +     +V+  G    GQLG + D   +   P    GL +++ V  +A    S AL
Sbjct: 180 LAATQ---SGEVWAMGRNDHGQLGFTGDHADA---PVQVAGLSNVKSV--AAGEFFSLAL 231

Query: 251 SAEGHLYTWGRGFNST-------SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
             +G ++ WG   ++          V  P  +    + +  A G  H + L  DG V   
Sbjct: 232 KNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAW 291

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G +  G L   +  +   P      +VS+L           A+ +A+ +G FH + L   
Sbjct: 292 GANGSGQLGFGDFETPKAP-----GRVSSL-----------ADVTAIASGWFHSLAL--- 332

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                           +  +  WG    G+LG   T DQ  P  V
Sbjct: 333 --------------TSDGVLWAWGNNGDGRLGTDATSDQSLPAQV 363



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 152/354 (42%), Gaps = 69/354 (19%)

Query: 71  MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTI 128
           M+A GG   LAL +      G V+SWG   SGQLG G  E  D   P  V          
Sbjct: 496 MVAAGGGFSLALKTD-----GSVWSWGNNGSGQLGLGLGENDDVFTPTNVDAL----PLA 546

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD---YRSHSSPVKVSSFVNKNVHQIAC 185
             I+AG  H+  ++  G +++ G  + GQLG G    Y + + P K+++    NV  IAC
Sbjct: 547 ASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAI--SNVAAIAC 604

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
           G  HSL L +D      + +G    GQLG+  +  ++   P+    L ++  V ++A   
Sbjct: 605 GGSHSLALARD---GSFWSWGYNYYGQLGLGDNVSKTT--PRKVNALSNV--VAMAAGDR 657

Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
            S AL+ +G L++WG       G       N P+ + +  +    A G+ H L LT DG 
Sbjct: 658 HSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGS 717

Query: 300 VLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           V   G +  G L   D +  ++ +P++     +SN     +  IA G  +S         
Sbjct: 718 VWSWGNNTRGQLGLGDNDDRNTPQPVTT----ISN-----IKAIAVGNNYSIA------- 761

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL---GNTCDQIHPKVV 408
                              I+E   +  WG+   GQLG+   G+  D+  P+ V
Sbjct: 762 -------------------ISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKV 796



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 130/317 (41%), Gaps = 55/317 (17%)

Query: 131  ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMR 188
            ++AG N S  +   G L++ GD   GQLG G  +S +  +P KV +       +IA G  
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDAL--PPAAKIAAGDN 1043

Query: 189  HSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H+L L  D     V+ +G    GQLG+ S     + + PQ    + +  +  I+  G  S
Sbjct: 1044 HALALAPD---GSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN--VAAIACGGSHS 1098

Query: 248  AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
             A++ +G L++WG       G         PQ + +  + +  A G  + L LT DG V 
Sbjct: 1099 LAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGEYYSLALTRDGSVW 1158

Query: 302  MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
              G +  G L   +      P  V  E +SN     V  IAAG +HS  +T         
Sbjct: 1159 SWGDNSDGQLGLGDNEDRNTPQKV--EVLSN-----VAAIAAGEDHSLALT--------- 1202

Query: 362  IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                              + ++ +WG    GQLGL +  D+  P+ V      +      
Sbjct: 1203 -----------------RDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIK------ 1239

Query: 422  EVFCGSGFTYAISRHCL 438
             +  G+  ++AIS   L
Sbjct: 1240 AIAAGNSHSFAISEEGL 1256



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 17/110 (15%)

Query: 15  ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTG---RLHDELSPQLLNLSSLSSVSM 71
           A+ NN    I EE        VW+WG    GQLG G    L DE +PQ + +  +S+V  
Sbjct: 753 AVGNNYSIAISEEG------LVWAWGYNCSGQLGIGTHGSLADENTPQKVIV--ISNVVG 804

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
           L+ G +H +ALT       G +++WG   +GQ+   E ++ +   PV  F
Sbjct: 805 LSAGSSHSIALTED-----GALWAWGNNEAGQIAAEEAIEYI-DNPVQVF 848


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 170/400 (42%), Gaps = 54/400 (13%)

Query: 20  AKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGA 77
            +P IE ++   +   ++ WG    G+LG G + DE  L P  ++    S +  +ACG  
Sbjct: 33  CEPVIEVQKSLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGEN 92

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           + + +T       GK++S G    GQLGH +    L  + +   D   +     + G  H
Sbjct: 93  YTVVITH-----DGKIYSCGNNDYGQLGHEQGRKRL--QLILGLDA--FVFKKAACGAYH 143

Query: 138 SGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           +  V++ G LF+ G  + GQLG +       SP  V +     + QIACGM+H+L L  +
Sbjct: 144 TIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNN 203

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
               ++Y +GS   GQLG+  D IR    P++   L  + I  I+  G  S A+S  G +
Sbjct: 204 ---GELYSWGSNSEGQLGLGVD-IRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 259

Query: 257 YTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           + WG+      G N T + N P  L +  +     AA G    + LT DG V   G   +
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMY 319

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L      +   P      +V  L G  V QI+ G  H+                    
Sbjct: 320 GQLGHGSNNNEILP-----RQVMELMGSTVTQISCGKRHT-------------------- 354

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                + ++     +  WG G  GQLG  +T     P+VV
Sbjct: 355 -----LALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVV 389



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG+ ++GQLG G  +  E+ P+L+N  +   ++ +ACGG H +A++       G +
Sbjct: 205 ELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISK-----SGAI 259

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  +  +   P  +      +  + + + G   S F++  G +FTCG G
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAK--VCYAACGEEFSVFLTVDGGVFTCGAG 317

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG   +   P +V   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 318 MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPS--QGRVYAWGLGGAGQL 375

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G   +  RS + PQV  G
Sbjct: 376 G--NNSTRSTTTPQVVRG 391


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 178/413 (43%), Gaps = 101/413 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG  + G+LG G   D + P+L+   +  +V  +ACG  H  A+T+      G++++
Sbjct: 98  VFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTT-----GELYT 152

Query: 96  WGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           WG G+   G LGHG       PK ++   DG    + ++S G  H+  ++  G LFT GD
Sbjct: 153 WGDGTHNVGLLGHGTDAGHWIPKRISGALDG--LPVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G+FG LGHG+  S S P +V S        +ACG+ H+  +                   
Sbjct: 211 GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAI------------------- 251

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------F 263
                                 +E++   ++   SA     G L+TWG G          
Sbjct: 252 ----------------------VEVIVTHSSSSVSA-----GKLFTWGDGDKHRLGHGDK 284

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            S     C  SL     F + A G +  + LT  G+VL +G S +G L +P   S  R  
Sbjct: 285 ESRLKPTCVASLI-DYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN--SDGRLP 341

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  ++++   G  V+Q+A G+ H AV+TG+                            +
Sbjct: 342 CLVEDRIA---GEHVLQVACGSYHVAVLTGRSE--------------------------V 372

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 421



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  +          +ACG +  + LT+      GKV 
Sbjct: 267 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 321

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S G    GQLG+    D   P  V       + +  ++ G  H   ++    +FT G G 
Sbjct: 322 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 379

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G+LGHGD      P +V +  ++ V  IACG   +  +   CL   V G
Sbjct: 380 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 426


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 158/344 (45%), Gaps = 38/344 (11%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           G G+ G+LG G    +     LNL   ++  +S      +H LALT       G V+SWG
Sbjct: 393 GKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTK-----NGVVYSWG 447

Query: 98  RGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
            G  G+LGHG +     PK +   F      IT ISAG  HS  ++  G L+T G+G  G
Sbjct: 448 DGEFGKLGHGNVATQKLPKVIRGVFKNQ--IITFISAGSRHSAAITKDGDLYTWGEGEHG 505

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           +LGHGD      P  V S       Q+A G  H++VL KD +   V+ FG+G  G+LG  
Sbjct: 506 RLGHGDSSIQRVPTLVRSI--DAASQVAAGCSHTVVLSKDEMT--VWTFGAGDNGKLGHG 561

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSDVNCP 272
             ++     P++   L  I I  I+A    S AL+  G +Y WG     G  +   V+  
Sbjct: 562 NTKMEYY--PKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHLL 619

Query: 273 QSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             +  SL        +LG  H L L+ D EV   G ++ G        +   P+S+   K
Sbjct: 620 PKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHCFT---PVSLP-TK 675

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWV-----RLFIISYTPF 368
           V  LDG+K+ QI+ G  HS      F W      + +++S  P+
Sbjct: 676 VLALDGIKIEQISTGTSHS------FAWTTPPLKKKYLVSNKPY 713



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 131/278 (47%), Gaps = 26/278 (9%)

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           SS +  + ++WG  SS QL  G     L PK    F         + AG   +  + D G
Sbjct: 332 SSSLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFKNA----IQLEAGQYCTFALFDDG 387

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQV 202
            L  CG G+ G+LG GD  S     K++ F N+N+ QI+       H+L L K+ +   V
Sbjct: 388 SLHACGKGSHGKLGLGDSSSKQCLHKLNLF-NQNIDQISSSKGSDSHTLALTKNGV---V 443

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGHLYTWGR 261
           Y +G G+ G+LG     + +  LP+V  G+   +I+  ISA    SAA++ +G LYTWG 
Sbjct: 444 YSWGDGEFGKLG--HGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGE 501

Query: 262 GFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG-EVLMLGGSHHGMLSDP 314
           G +       +S    P  + S  + SQ A G +H +VL+ D   V   G   +G L   
Sbjct: 502 GEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHG 561

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
                  P     + V  L G+++ +IAAG + S  +T
Sbjct: 562 NTKMEYYP-----KIVDALKGIRIKKIAAGTQCSIALT 594



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 13/214 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +++WG G  G+LG G    +  P L+   S+ + S +A G +H + L+         V++
Sbjct: 496 LYTWGEGEHGRLGHGDSSIQRVPTLVR--SIDAASQVAAGCSHTVVLSKDEMT----VWT 549

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G +G+LGHG      YPK V    G R  I  I+AG   S  ++ +G ++  G G  
Sbjct: 550 FGAGDNGKLGHGNTKMEYYPKIVDALKGIR--IKKIAAGTQCSIALTWTGFIYVWGCGPC 607

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
             +G  D   H  P  V S  + ++  I+ G  H L L  D   ++VY +G+   GQ G+
Sbjct: 608 LGVGAAD-AVHLLPKIVESLRDVHIVDISLGDCHCLALSAD---HEVYSWGNNNMGQCGL 663

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
                  VSLP   + L  I+I  IS     S A
Sbjct: 664 GH-CFTPVSLPTKVLALDGIKIEQISTGTSHSFA 696


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 3069

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3127

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3243 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3302

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       + T   H   LF  +  P 
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDMATPSVHEPVLFQTARDPL 3351



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 145/316 (45%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P       +  LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 24/269 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
            +V+SWG   DG+LG G       P+++   SL  + ++  A GGAH   +T+      G 
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIELVDVAAGGAHSACVTA-----AGD 4117

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            +++WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GD
Sbjct: 4118 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4177

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +
Sbjct: 4178 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHR 4234

Query: 213  LGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            LG  S D +R    P+   GL   +++ I+         + +G +YTWG       G  +
Sbjct: 4235 LGHGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4291

Query: 266  TSDVNCPQSLPS--SLSFSQAALGWNHVL 292
            T+ +  P+ +P+      ++ A G  H L
Sbjct: 4292 TNAIQRPRLVPALQGKKVNRVACGSAHTL 4320



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 124/284 (43%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 4053 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IELVDVAAG 4105

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 4106 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4165

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4166 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4220

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4221 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4280

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP       V  L G KV ++A G+ H+
Sbjct: 4281 DNDEGQLGDGTTNAIQRP-----RLVPALQGKKVNRVACGSAHT 4319



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4015

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4016 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4072

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 4073 EDGKLGHGN---RSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4129

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4130 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4189

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4190 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4244

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4245 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPAL 4304

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4305 QGKKVNR-----VACGSAHTLAWS 4323



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AVPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 124/295 (42%), Gaps = 58/295 (19%)

Query: 133  AGWNHSGF-VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK-----VSSFVNKNVHQIACG 186
            AG + S F V+  G ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQVTALSSYVVKKV-AVHSG 3059

Query: 187  MRHSLVLLKDCLGNQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
             RH+  L  D    +V+ +G G  G+LG  S+    +   P++   L    I  I+    
Sbjct: 3060 GRHATALTVD---GKVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSS 3113

Query: 246  RSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVL 294
             SAAL++ G LYTWG G        ++T+ +  P+ +   L     Q A G      L L
Sbjct: 3114 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLAL 3172

Query: 295  TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            T +G V   G    G L          P     + +  L+G  V QI  GA+ S  +T  
Sbjct: 3173 TDEGLVFSWGDGDFGKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT-- 3225

Query: 355  FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                    ++  + TWG G++ +LG G+      P+VV 
Sbjct: 3226 ------------------------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 3256



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 52/240 (21%)

Query: 203  YGFGSG--KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +G G G    G L      +  + +P  +  L  + +V ++       A++ EG +Y  G
Sbjct: 2962 FGVGQGAVSTGSLCCDGVGLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3021

Query: 261  RGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
               N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G    G
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 3081

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R++  +P       +  L   ++  IA G+ HSA +T                 
Sbjct: 3082 KLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS---------------- 3120

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 427
                      +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V CGS
Sbjct: 3121 ----------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3164



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4275 EVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4333


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 178/414 (42%), Gaps = 101/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   PQL+   + +S+  +ACG  H  A+T     + G+++
Sbjct: 292 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT-----MTGEIY 346

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK ++   +G    I  +S G  H+  ++ +G LFT G
Sbjct: 347 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG--LQIASVSCGPWHTALITSTGQLFTFG 404

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD  +   P +V S        +ACG+ H+  +++  + +      SGK  
Sbjct: 405 DGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGK-- 462

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SD 268
                                                       L+TWG G  S     D
Sbjct: 463 --------------------------------------------LFTWGDGDKSRLGHGD 478

Query: 269 VNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
              P+  P+ +S      F + A G +  + LT  G+V  +G + +G L +P   ++   
Sbjct: 479 KE-PRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNP---NADGK 534

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           L   +E     D V+  +IA GA H AV+T +                            
Sbjct: 535 LPCLVEDKLTKDCVE--EIACGAYHVAVLTSR--------------------------NE 566

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P +V   D  + R  +  + CGS FT AI  H
Sbjct: 567 VFTWGKGANGRLGHGDVEDRKAPTLV---DALKERHVK-NIACGSNFTAAICLH 616



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 146/361 (40%), Gaps = 96/361 (26%)

Query: 91  GKVFSWGR---------GSSGQLGH-GEMVDALYPKPV---TFFDGHRYTITHISAGWNH 137
           G V+ WG          G+   +G+ G   D L PKP+      D H     HI+ G  H
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH-----HIACGVKH 283

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           +  VS  G +FT G+ + G+LGHG  +  + P  + S    ++  +ACG  H+  +    
Sbjct: 284 AALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT--- 340

Query: 198 LGNQVYGFGSG--KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEG 254
           +  ++Y +G G    G LG   D   S  +P+   G L  ++I  +S     +A +++ G
Sbjct: 341 MTGEIYTWGDGTHNAGLLGHGTD--VSHWIPKRISGPLEGLQIASVSCGPWHTALITSTG 398

Query: 255 HLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            L+T+                                    GDG   +LG   HG   D 
Sbjct: 399 QLFTF------------------------------------GDGTFGVLG---HG---DK 416

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
           E V   R       +V +L G++ I +A G  H+A +          I++++        
Sbjct: 417 ETVFYPR-------EVESLSGLRTIAVACGVWHAAAIVE-------VIVTHS-------- 454

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAI 433
           +    +  + TWG G+  +LG G+   ++ P  V+ L D   +R     V CG   T  +
Sbjct: 455 SSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHR-----VACGHSLTVGL 509

Query: 434 S 434
           +
Sbjct: 510 T 510


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 152/327 (46%), Gaps = 28/327 (8%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + ++ WG+   G+LG G + +E  ++P+ ++ S  ++V   ACGG+H L LT       G
Sbjct: 1   MALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTK-----DG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTC 150
           K+++ G    GQLGH    + L  K   F      Y +T +S G +HS  +++ G LF+ 
Sbjct: 56  KLYTCGNNDHGQLGHD--TNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSW 113

Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           G    GQLGH  D  S+ +P  + S   K V QI+CG  H L L       +++ +G+ +
Sbjct: 114 GSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN---SGELFAWGANE 170

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG+     + V    +   L  I I  I+  G+ S A+S  G ++ WG+      G 
Sbjct: 171 YGQLGLGTTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N       P  L +  SL     + G +  + LT +G V   G    G L      +   
Sbjct: 230 NDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEIL 289

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
           P       V  L G K+ QIA G +H+
Sbjct: 290 P-----RMVFELMGSKITQIACGRKHT 311



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 10/162 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WGA   GQLG G    ++ P    + SL+   ++ +ACGG H  A++       G 
Sbjct: 162 ELFAWGANEYGQLGLGTTGKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSK-----SGA 215

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WG+ + GQLG  ++    YP  +         + +IS G + S F++  G +FTCG 
Sbjct: 216 IFGWGKNTFGQLGLNDLDSRCYPTQLKTL--RSLGVRYISCGDDFSVFLTQEGGVFTCGL 273

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           GTFGQLGHG + +   P  V   +   + QIACG +H+L  +
Sbjct: 274 GTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFV 315



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 132/326 (40%), Gaps = 45/326 (13%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++ WG    G+LG G + +     P          +   + G +H+  ++  G L+TCG+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLGH  +   +  P  +S+  N  V Q++CG+ HSL L       Q++ +GS   G
Sbjct: 63  NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTN---WGQLFSWGSNATG 119

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG   D + S   P++   +    +V IS       AL+  G L+ WG       G  +
Sbjct: 120 QLGHDLDMV-SYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           T       +L  SL+    +  A G NH   ++  G +   G +  G L   +  S   P
Sbjct: 179 TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYP 238

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                 ++  L  + V  I+ G + S  +T                          +   
Sbjct: 239 -----TQLKTLRSLGVRYISCGDDFSVFLT--------------------------QEGG 267

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           + T G G  GQLG G   ++I P++V
Sbjct: 268 VFTCGLGTFGQLGHGTHGNEILPRMV 293


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 178/413 (43%), Gaps = 101/413 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG  + G+LG G   D + P+L+   +  +V  +ACG  H  A+T+      G++++
Sbjct: 98  VFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTT-----GELYT 152

Query: 96  WGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           WG G+   G LGHG       PK ++   DG    + ++S G  H+  ++  G LFT GD
Sbjct: 153 WGDGTHNVGLLGHGTDAGHWIPKRISGALDG--LPVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G+FG LGHG+  S S P +V S        +ACG+ H+  +                   
Sbjct: 211 GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAI------------------- 251

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------F 263
                                 +E++   ++   SA     G L+TWG G          
Sbjct: 252 ----------------------VEVIVTHSSSSVSA-----GKLFTWGDGDKHRLGHGDK 284

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            S     C  SL     F + A G +  + LT  G+VL +G S +G L +P   S  R  
Sbjct: 285 ESRLKPTCVASLI-DYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPN--SDGRLP 341

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  ++++   G  V+Q+A G+ H AV+TG+                            +
Sbjct: 342 CLVEDRIA---GEHVLQVACGSYHVAVLTGR--------------------------SEV 372

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 421



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  +          +ACG +  + LT+      GKV 
Sbjct: 267 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 321

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S G    GQLG+    D   P  V       + +  ++ G  H   ++    +FT G G 
Sbjct: 322 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 379

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G+LGHGD      P +V +  ++ V  IACG   +  +   CL   V G
Sbjct: 380 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 426


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 175/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   SL+ V +++CG  H  A+T+      G +F
Sbjct: 276 EVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTT-----SGDLF 330

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG GS   G LG G  V    PK V+   +G    +  ++ G  HS   + SG L+T G
Sbjct: 331 NWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG--LQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  + + P +V +       ++ACG+ HS  +++       + +  ++Y 
Sbjct: 389 DGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYT 448

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GD+   L  +           
Sbjct: 449 WGDGDKNRLG----------------------------HGDKEPRLVPK----------- 469

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C Q+L     F Q A G N  + L   G V  +G S +G L +P +    +P  
Sbjct: 470 ------CVQALLE-YDFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNP-KSDGKQPCL 521

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V     S L    V +I+ GA H  V+T +                            + 
Sbjct: 522 VQDRLASEL----VEEISCGASHVTVLTSR--------------------------SEVY 551

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 552 TWGMGANGRLGHGDLKDRKKPCLV---EALKDRHVK-SISCGSNFTTCICIH 599



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 123/327 (37%), Gaps = 77/327 (23%)

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
           VD L PKP+         +  I+ G  H    +  G +FT G+   G+LGHG     S P
Sbjct: 242 VDVLIPKPLE--SDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRP 299

Query: 170 VKVSSFVNKNVHQIACGMRHSL-VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
             V S     V  I+CG  H+  V     L N  +G GS   G LG   +   S  LP+ 
Sbjct: 300 KLVESLSLTVVDLISCGEFHTCAVTTSGDLFN--WGDGSYNVGLLGCGTE--VSYWLPKK 355

Query: 229 TIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG 287
             G L  ++++ ++     SA  ++ G LYT+                            
Sbjct: 356 VSGPLEGLQVLSVACGSWHSALTTSSGKLYTF---------------------------- 387

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
                   GDG   +LG      L+ P+ V +             L G K I++A G  H
Sbjct: 388 --------GDGTFGVLGHGDRETLAYPKEVEA-------------LSGFKTIKVACGIWH 426

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           SA +    +     ++S                + + TWG G+  +LG G+   ++ PK 
Sbjct: 427 SAAIVEVTNQTGANVMS----------------KKLYTWGDGDKNRLGHGDKEPRLVPKC 470

Query: 408 VNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           V    E+       ++ CG   T A++
Sbjct: 471 VQALLEYDFH----QLACGHNMTVALA 493


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 180/419 (42%), Gaps = 45/419 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P+L+   S   V  +ACG AH   +TS      G V 
Sbjct: 4484 EVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQ-----GHVL 4538

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4539 TWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4598

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L +      VY +G G   +LG
Sbjct: 4599 YGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4655

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              + D +R    P+    L   +I+ I+       A S  G ++TWG       G  + S
Sbjct: 4656 HGNTDHVRR---PKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVS 4712

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             +  P+         Q+  G + V V+ G    L L       LS+  R   + PL   L
Sbjct: 4713 AIQRPR-------LVQSLQGKHIVKVICGSAHTLALSTYQ---LSEAVRPPPSPPLEYDL 4762

Query: 328  EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
             +    + V V  I          TG    ++  ++   P  P   +N I   R+ M  G
Sbjct: 4763 VRDIAPEDVLVYSIKE--------TGFRKVIQTTMVRDKPHGPVIELNRIQVKRSRMRSG 4814

Query: 388  WGEHGQLGLGNTCDQIHPKVVNLGDE---FQNRDTQLEVF------CGSGFTYAISRHC 437
             G  G  G+ +   Q+  K+  L  E     +R  +++        CG GF+ +I+  C
Sbjct: 4815 NGLAGVDGMKSVFGQMVQKLPLLTQEALSMPHRVWKVKFVGESVDDCGGGFSESIAEMC 4873



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 27/288 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+VFSWG G  G+LGHG       PK +    G    +  I+ G
Sbjct: 4472 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSG--IGVIDIACG 4524

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++  G + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4584

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       +P     L  + +  +      S AL+ 
Sbjct: 4585 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR 4639

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        +T  V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4640 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWG 4699

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +  G L D    +  RP       V +L G  ++++  G+ H+  ++
Sbjct: 4700 DNDEGQLGDGTVSAIQRP-----RLVQSLQGKHIVKVICGSAHTLALS 4742



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 168/413 (40%), Gaps = 61/413 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            KV  WG     QLG  +      P   + LS L  + +   GG+  L + S      GK+
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--AGGSKSLFIVSQD----GKL 3295

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++ G G++G+LG G   +   PK V     +      + +G  H+  ++  G +F+ G+G
Sbjct: 3296 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3355

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHG+  +   P  + +   K +  IACG  HS  +       ++Y +G G+ G+L
Sbjct: 3356 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3412

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGR------GFN 264
            G   D    +  P++   L D  +V + A G R A    L+ EG +++WG       G  
Sbjct: 3413 G-HGDNCTQLK-PKLVTALADHRVVQV-ACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3469

Query: 265  STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +   + P  +   + +   Q   G    L LT  GEV   G   +  L         +P
Sbjct: 3470 GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3529

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                   +  L G KVI +A GA H   VT                          ++  
Sbjct: 3530 -----TPIQGLRGKKVIHVAVGALHCLAVT--------------------------DSGQ 3558

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A S
Sbjct: 3559 VYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNR-----VACGSSHSVAWS 3606



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 142/314 (45%), Gaps = 36/314 (11%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D  +P+ +  L S++ V + A C G HVLALT+      G VFSWG G  G+LGHG+   
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTAT-----GDVFSWGNGEGGRLGHGDTSS 669

Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
              P  +      +  +T +  G ++S  ++ +G L+T G GT+G+LGHG+      P  
Sbjct: 670 KDIPTRIVALAERQ--VTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTI 727

Query: 172 VSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV----SL 225
           V     + V  +A  CG  HSL +    +   VY +G G  G+LG       SV     L
Sbjct: 728 VQVLKQQRVIHVALGCGDAHSLCVTDTGI---VYAWGDGDFGKLGNGTCNGSSVPVAIEL 784

Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS---------TSDVNCPQSLP 276
           PQ + G      V + +    S AL  +G +Y+WG+G            T+     Q+L 
Sbjct: 785 PQCSDG-----AVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALE 839

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
              +    A+G  H L LT  GE+   G +    L  P     TR   V L  ++    +
Sbjct: 840 GK-NIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPP---CVTRDPIVLLPILTTPPTL 895

Query: 337 KVIQIAAGAEHSAV 350
           ++  +AAG   S V
Sbjct: 896 RIAGMAAGGAQSIV 909



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 11/227 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G    +  P  +   +   V+ + CG ++  A+T+      G++++
Sbjct: 651 VFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITA-----AGELYT 705

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+ G+LGHG   D   P  V      R     +  G  HS  V+D+G ++  GDG F
Sbjct: 706 WGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDF 765

Query: 156 GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           G+LG+G     S PV +     +    ++  G   S+ L +D     VY +G G  G+LG
Sbjct: 766 GKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRD---GTVYSWGKGHGGRLG 822

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
                    + P+    L    IV ++       AL+A G LY WGR
Sbjct: 823 HGHS--EHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGR 867



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 172/418 (41%), Gaps = 65/418 (15%)

Query: 36   VWSWGAGTDGQLGT---GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
            ++ WG    GQLG     R+      + L+L  L  + +   GG   L   +P     GK
Sbjct: 4379 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSL--LRPIQI--AGGEQTLYAVTPD----GK 4430

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            +++ G G+ G+LG G       P  V            +++G  H   +S  G +F+ G+
Sbjct: 4431 LYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGE 4490

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
            G  G+LGHG+  S+  P  + +     V  IACG  HS      C+ +Q  V  +G G+ 
Sbjct: 4491 GEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSA-----CITSQGHVLTWGKGRY 4545

Query: 211  GQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
            G+L  G S+D+++   L +  +G   I+I   S +  ++  ++ + ++++WG       G
Sbjct: 4546 GRLGHGDSEDQLQP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLG 4603

Query: 263  FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
               +     P  + S   L  ++   G    + LT  G V   G   +  L         
Sbjct: 4604 RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVR 4663

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            RP     +KV+ L G K+I IA G+ H    +                          + 
Sbjct: 4664 RP-----KKVAALQGKKIISIATGSLHCVACS--------------------------DG 4692

Query: 381  RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 438
              + TWG  + GQLG G       P++V      Q +   ++V CGS  T A+S + L
Sbjct: 4693 GEVFTWGDNDEGQLGDGTVSAIQRPRLVQ---SLQGKHI-VKVICGSAHTLALSTYQL 4746



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 17/218 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV--SMLACGGAHVLALTSPSSVIGGK 92
           ++++WG GT G+LG G   D+  P ++ +     V    L CG AH L +T       G 
Sbjct: 702 ELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTD-----TGI 756

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WG G  G+LG+G    +  P  +         +  + +G + S  +   G +++ G 
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAV-KVFSGSHFSVALGRDGTVYSWGK 815

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHG     +SP  + +   KN+  +A G+ H L L       ++YG+G     Q
Sbjct: 816 GHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTA---SGELYGWGRNDFQQ 872

Query: 213 L---GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
           L    V++D I  V LP +T     + I G++A G +S
Sbjct: 873 LCPPCVTRDPI--VLLPILTTP-PTLRIAGMAAGGAQS 907



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 35/245 (14%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +AC    +  LT+   V+           S Q  +    D   PKP+   +      
Sbjct: 584 VRQVACSETSIYILTTTGQVL-----------SLQHSNCHTPDTTAPKPIEGLESVNIVQ 632

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
                   H   ++ +G +F+ G+G  G+LGHGD  S   P ++ +   + V  + CG  
Sbjct: 633 LAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSS 692

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISAN-GD 245
           +S  +       ++Y +G G  G+L  G S+D+     LP +   L    ++ ++   GD
Sbjct: 693 YSAAITA---AGELYTWGRGTYGRLGHGNSEDK----HLPTIVQVLKQQRVIHVALGCGD 745

Query: 246 -RSAALSAEGHLYTWGRG-FNSTSDVNCP-QSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
             S  ++  G +Y WG G F    +  C   S+P ++   Q +           DG V +
Sbjct: 746 AHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCS-----------DGAVKV 794

Query: 303 LGGSH 307
             GSH
Sbjct: 795 FSGSH 799



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 43/162 (26%)

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
           LP+ +   Q A     + +LT  G+VL L    H     P+        + A + +  L+
Sbjct: 578 LPAGVQVRQVACSETSIYILTTTGQVLSL---QHSNCHTPD--------TTAPKPIEGLE 626

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
            V ++Q+AA  E   V+                         +     + +WG GE G+L
Sbjct: 627 SVNIVQLAAHCEGRHVL------------------------ALTATGDVFSWGNGEGGRL 662

Query: 395 GLGNTCDQIHP-KVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 434
           G G+T  +  P ++V L +       Q+  VFCGS ++ AI+
Sbjct: 663 GHGDTSSKDIPTRIVALAER------QVTGVFCGSSYSAAIT 698



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 47/236 (19%)

Query: 167 SSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           ++P  +    + N+ Q+A  C  RH L L        V+ +G+G+ G+LG       S  
Sbjct: 617 TAPKPIEGLESVNIVQLAAHCEGRHVLALTAT---GDVFSWGNGEGGRLG--HGDTSSKD 671

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCP---QSL 275
           +P   + L + ++ G+      SAA++A G LYTWGRG        ++ D + P   Q L
Sbjct: 672 IPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVL 731

Query: 276 PSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
                   A   G  H L +T  G V   G    G L +     S+ P+++ L + S  D
Sbjct: 732 KQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCS--D 789

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
           G   +++ +G+ H +V  G+                         +  + +WG G 
Sbjct: 790 GA--VKVFSGS-HFSVALGR-------------------------DGTVYSWGKGH 817


>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Hydra magnipapillata]
          Length = 731

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 16/197 (8%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V+SWG+   GQ+G   + H  +SPQL+   S   +  +  GG H LALT     I G +F
Sbjct: 87  VFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQICAGGHHSLALT-----ISGTIF 141

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+ S GQLG G+  D L+P  +   +G    + +IS G  HS  ++ +G ++T G G+
Sbjct: 142 AWGKNSFGQLGLGDQQDRLFPTKIQSMNGKH--VRYISCGEEHSVLLTSAGRVYTFGCGS 199

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV-LLKDCLGNQVYGFGSGKRGQL 213
            GQLGH ++     P  V   +   V QIACG +H+L  ++K   GN++Y FG   +GQL
Sbjct: 200 SGQLGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHTLAHVMK---GNKLYSFGLNVKGQL 256

Query: 214 GV-SKDRIRSVSLPQVT 229
           G+ S ++ R   +P +T
Sbjct: 257 GIGSYEKAR---IPMLT 270



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 108/255 (42%), Gaps = 34/255 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLH--------DELSPQLLNLSSLSSVSMLACGGAHVLALT-- 83
           + ++SWG     QLG   L         D   P  + +++   +  + CG  H L L+  
Sbjct: 1   MSMYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGG 60

Query: 84  -----------------SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
                              + V  G VFSWG    GQ+G        Y  P    D    
Sbjct: 61  LVYASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHK-YVSPQLVRDLSNC 119

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
            I  I AG +HS  ++ SG +F  G  +FGQLG GD +    P K+ S   K+V  I+CG
Sbjct: 120 PIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCG 179

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
             HS++L       +VY FG G  GQLG   +      +P++ + L    +  I+     
Sbjct: 180 EEHSVLLTS---AGRVYTFGCGSSGQLG--HNEFEDQFIPKMVVDLMGTPVTQIACGRKH 234

Query: 247 SAALSAEGH-LYTWG 260
           + A   +G+ LY++G
Sbjct: 235 TLAHVMKGNKLYSFG 249



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 106/272 (38%), Gaps = 55/272 (20%)

Query: 93  VFSWGRGSSGQLG--------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           ++SWG  +  QLG          E +D  +P P+       + I  I  GWNH+ F+S  
Sbjct: 3   MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILV--NTSFCIEKIICGWNHTLFLS-G 59

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G ++  G    G+LG                 N+N                +     V+ 
Sbjct: 60  GLVYASGLNYDGELG---------------ISNENT---------------EVPDGHVFS 89

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           +GS + GQ+G++    + VS PQ+   L +  I+ I A G  S AL+  G ++ WG+   
Sbjct: 90  WGSNEFGQVGINSKFHKYVS-PQLVRDLSNCPIIQICAGGHHSLALTISGTIFAWGKNSF 148

Query: 262 ---GFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
              G     D   P  + S         + G  H ++LT  G V   G    G L   E 
Sbjct: 149 GQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSGQLGHNEF 208

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
                P     + V +L G  V QIA G +H+
Sbjct: 209 EDQFIP-----KMVVDLMGTPVTQIACGRKHT 235



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 57/161 (35%), Gaps = 54/161 (33%)

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTG------------------------DGEVLMLGGSH 307
           P  + +S    +   GWNH L L+G                        DG V   G + 
Sbjct: 35  PILVNTSFCIEKIICGWNHTLFLSGGLVYASGLNYDGELGISNENTEVPDGHVFSWGSNE 94

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
            G +     ++S     V+ + V +L    +IQI AG  HS  +T          IS T 
Sbjct: 95  FGQVG----INSKFHKYVSPQLVRDLSNCPIIQICAGGHHSLALT----------ISGT- 139

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                          I  WG    GQLGLG+  D++ P  +
Sbjct: 140 ---------------IFAWGKNSFGQLGLGDQQDRLFPTKI 165


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 2716 KVYACGEATNGRLGLG-MSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 2769

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 2770 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2827

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2828 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2884

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2885 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2942

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              SDV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 2943 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3002

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
            +P       V  L+G K+ ++A G+ HS       + T   H   LF  +  P 
Sbjct: 3003 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDMATPSVHEPVLFQTARDPL 3051



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L +      
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D   +  T+P    L     LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGNNDQCQHFD--TLHQTKPEPSLL---PGLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G      V+D+G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++   L   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 121/281 (43%), Gaps = 29/281 (10%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ V    G    +  I+AG
Sbjct: 3726 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTE--VVDIAAG 3778

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 3838

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS---AA 249
            L  D   + V+ +G G  G+LG        V + +V + L     VG  +    S     
Sbjct: 3839 LTDD---DTVWSWGDGDYGKLGRGGSDGCKVPM-KVPLSLR----VGRPSTPPPSWPRLD 3890

Query: 250  LSAEGHLYTWGRGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
            +  +G  +  G G  S   V  P+ +           A G  H +  T +GEV   G + 
Sbjct: 3891 VGGKGDYHRLGHG--SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDND 3948

Query: 308  HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 3949 EGQLGDGTTNAIQRPRLVA-----ALQGRKVNRVACGSAHT 3984



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 157/381 (41%), Gaps = 55/381 (14%)

Query: 62   NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTF 120
             LS+L+ V  +A G   + A+T     + GKV++ G  ++G+LG G     +  P+ VT 
Sbjct: 2692 TLSALNVV-QVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGMSSGTVPIPRQVTA 2745

Query: 121  FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
               +      + +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K +
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRI 2805

Query: 181  HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVG 239
              IACG  HS  L       ++Y +G G+ G+LG   +  +    + +V +G H +  V 
Sbjct: 2806 RDIACGSSHSAALTS---SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVA 2861

Query: 240  ISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHV 291
              +   ++ AL+ EG +++WG G         +   N PQ++   +     Q   G    
Sbjct: 2862 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 2921

Query: 292  LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            L LT  G V   G   +  L     V   +P     + V  L G K++ +A GA H   V
Sbjct: 2922 LALTKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAV 2976

Query: 352  TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
            T                          +   +  WG  +HGQ G G T     P +V  G
Sbjct: 2977 T--------------------------DAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-G 3009

Query: 412  DEFQNRDTQLEVFCGSGFTYA 432
             E Q       V CGS  + A
Sbjct: 3010 LEGQK---ITRVACGSSHSVA 3027



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 24/229 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++     + V  +A GGAH   +TS      G ++
Sbjct: 3738 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTS-----AGDLY 3792

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3793 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 3852

Query: 155  FGQLGHGDYRSHSSPVKV--SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            +G+LG G       P+KV  S  V +         R  +              G G   +
Sbjct: 3853 YGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDV-------------GGKGDYHR 3899

Query: 213  LGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            LG  S D +R    P+   GL   +++ I+         + EG +YTWG
Sbjct: 3900 LGHGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWG 3945



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 145/396 (36%), Gaps = 90/396 (22%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3688

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3689 GYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GEVYSWGEA 3745

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L   E+V I+A G  SA +++ G LYTWG+G     
Sbjct: 3746 EDGKLGHGN---RSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRL 3802

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGML----SD 313
             +S S+      L  +L   +        G    L LT D  V   G   +G L    SD
Sbjct: 3803 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3862

Query: 314  PERVSSTRPLSVAL-----------------------------------EKVSNLDGVKV 338
              +V    PLS+ +                                    +V  L G KV
Sbjct: 3863 GCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 3922

Query: 339  IQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
            I IA G+ H    T                          E   + TWG  + GQLG G 
Sbjct: 3923 IAIATGSLHCVCCT--------------------------EEGEVYTWGDNDEGQLGDGT 3956

Query: 399  TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            T     P++V      Q R     V CGS  T A S
Sbjct: 3957 TNAIQRPRLVA---ALQGRKVN-RVACGSAHTLAWS 3988



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKCYANVIGPIQSKGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQPL------------------------AVTD 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 77/201 (38%), Gaps = 49/201 (24%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGKV 93
            +++WG G  G+LG     D+L P+L+       V  +ACG   A  L LT   +V     
Sbjct: 3791 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTV----- 3845

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFF----------------------DGHRY----- 126
            +SWG G  G+LG G       P  V                         D HR      
Sbjct: 3846 WSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSD 3905

Query: 127  ---------------TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
                            +  I+ G  H    ++ G ++T GD   GQLG G   +   P  
Sbjct: 3906 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRL 3965

Query: 172  VSSFVNKNVHQIACGMRHSLV 192
            V++   + V+++ACG  H+L 
Sbjct: 3966 VAALQGRKVNRVACGSAHTLA 3986



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 50/218 (22%)

Query: 223  VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQSL 275
            + +P  +  L  + +V ++       A++ EG +Y  G   N       S+  V  P+ +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743

Query: 276  P--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
               SS    + A+  G  H   LT DG+V   G    G L    R++  +P       + 
Sbjct: 2744 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIE 2798

Query: 332  NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
             L   ++  IA G+ HSA +T                              + TWG GE+
Sbjct: 2799 ALKTKRIRDIACGSSHSAALTSSGE--------------------------LYTWGLGEY 2832

Query: 392  GQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 427
            G+LG G+   Q+ PK+V   LG         ++V CGS
Sbjct: 2833 GRLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 2864



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 3940 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAHTLAWSTSKPASAGKL 3998


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 178/407 (43%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACGG H   +T       G++F+WG  S G+LGHG   D L
Sbjct: 295 DSLLPKALESAVVLDVQNIACGGRHAALVTKQ-----GEIFTWGEESGGRLGHGVDSDVL 349

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            PK V         I  +S G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P K
Sbjct: 350 QPKLVDALGN--TNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKK 407

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           ++  +   +V  IACG  H+ V+       Q++ FG G  G LG   DR  SV++P+   
Sbjct: 408 INGPLEGIHVSSIACGPWHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-GSVTMPREVE 462

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTW--------GRGFNSTSDVN 270
            L  +  V  +     +AA+             + G L+TW        G G   T  V 
Sbjct: 463 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVP 522

Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
              +     +F + + G +  + LT  G V  +G   +G L +P       P+ V     
Sbjct: 523 TCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPVRVE---- 577

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L    V +IA GA H AV+T +                            + TWG G 
Sbjct: 578 GKLSKSFVEEIACGAYHVAVLTSRTE--------------------------VYTWGKGA 611

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           +G+LG G+T D+  P +V        +D Q++ + CG+ FT AI  H
Sbjct: 612 NGRLGHGDTDDRNSPTLVE-----ALKDKQVKSIACGTNFTAAICLH 653



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 159/337 (47%), Gaps = 34/337 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG  + G+LG G   D L P+L++    +++ +++CG  H  A+T     + G ++
Sbjct: 328 EIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVT-----LSGDLY 382

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK +    +G    ++ I+ G  H+  V+ +G LFT G
Sbjct: 383 TWGDGTYNFGLLGHGNEVSHWIPKKINGPLEG--IHVSSIACGPWHTAVVTSAGQLFTFG 440

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD  S + P +V S       + ACG+ H+  +++  +G+         ++
Sbjct: 441 DGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 500

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      + V  P     L D     +S     + AL+  GH+YT    
Sbjct: 501 FTWGDGDKGRLGHGDKETKLV--PTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSP 558

Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N  +D   P  +   LS S   + A G  HV VLT   EV   G   +G L   
Sbjct: 559 VYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 618

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +      P  V       L   +V  IA G   +A +
Sbjct: 619 DTDDRNSPTLVEA-----LKDKQVKSIACGTNFTAAI 650


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 179/407 (43%), Gaps = 87/407 (21%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  T G+LG G   D   P+L+   + ++V ++ACG  H  A+T     + G+++
Sbjct: 257 EVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVT-----MDGELY 311

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  ++G LG+G  V    PK ++   +G    + +++ G  H+  +S +G LFT G
Sbjct: 312 TWGDGVHNAGLLGNGTDVSHWMPKRISGILEG--LQVAYVACGPWHTALISSTGQLFTFG 369

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD  S S P +V S        +ACG+ H+  +++  +        SGK  
Sbjct: 370 DGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGK-- 427

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
                            T G  D   +G   +GD+   L                     
Sbjct: 428 ---------------LFTWGDGDKNRLG---HGDKEPRLK-------------------- 449

Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P  +P+    +F + A G +  + LT  G+V  +G S +G L +P      +P  V    
Sbjct: 450 PTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPH-ADGKQPCLVE--- 505

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
              L G    ++A GA H  V+T K                            + TWG G
Sbjct: 506 -DKLLGESAEEVACGAYHVMVLTSK--------------------------NEVYTWGKG 538

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G+  D+  P +V   +  +++  ++ + CGS ++ AI  H
Sbjct: 539 ANGRLGHGDVEDRKSPTLV---ESLKDKHVKI-IACGSNYSAAICLH 581



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V++WG G +G+LG G + D  SP L+       V ++ACG  +  A+    S+ G
Sbjct: 531 EVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSG 586


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 158/331 (47%), Gaps = 30/331 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +S+LS+  V  +A   GG H +ALT     + 
Sbjct: 1821 KVYACGEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALT-----VD 1874

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L++ 
Sbjct: 1875 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 1932

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGK 209
            G G +G+LGHGD  +   P  V   +   V Q+ACG R +  L L D     V+ +G G 
Sbjct: 1933 GLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTD--EGMVFSWGDGD 1990

Query: 210  RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNS 265
             G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G       
Sbjct: 1991 FGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048

Query: 266  TSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
             +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + +
Sbjct: 2049 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRK 2108

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            P       V  L+G K+ ++A G+ HS   T
Sbjct: 2109 P-----TLVQGLEGQKITRVACGSSHSVAWT 2134



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +++SWG   DG+LG G       P+++       V  +A GGAH   +T+      G+++
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELY 2924

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 2925 TWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 2984

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 2985 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3041

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3042 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3085



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+++SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 2858 GGKHCLALSSE-----GELYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 2910

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG L+T G G +G+LGHGD      P  V +     V  +ACG     +L 
Sbjct: 2911 GAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLC 2970

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 2971 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3025

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3026 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3085

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 3086 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 3124



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 177/438 (40%), Gaps = 57/438 (13%)

Query: 7    EETEKGKSALINNAKPKIEEEEEEQQV-VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
            EE E  K+A  + ++ ++   E    +  KV+ WG     QLG  +      P      S
Sbjct: 1740 EEEEDEKTATGSMSRKRLSGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 1799

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
              +V  +A G   + A+T+      GKV++ G  ++G+LG G +     P P        
Sbjct: 1800 ALNVVQVAGGSKSLFAVTAE-----GKVYACGEATNGRLGLG-LSSGTIPIPRQISALSN 1853

Query: 126  YTITHIS--AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
            Y +  ++  +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +   K +  I
Sbjct: 1854 YVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 1913

Query: 184  ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
            ACG  HS  +       ++Y +G G+ G+LG   +  +    L +V +G H +  V   +
Sbjct: 1914 ACGSSHSAAITS---SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLG-HRVVQVACGS 1969

Query: 243  NGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVL 294
               ++ AL+ EG +++WG G         +   N PQ++   +     Q   G    L L
Sbjct: 1970 RDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029

Query: 295  TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            T  G V   G   +  L     V   +P     + V  L G K++ +A GA H   VT  
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGTDVHVRKP-----QMVEGLRGKKIVHVAVGALHCLAVT-- 2082

Query: 355  FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                                    E   +  WG  +HGQ G G T     P +V  G E 
Sbjct: 2083 ------------------------ETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEG 2117

Query: 415  QNRDTQLEVFCGSGFTYA 432
            Q       V CGS  + A
Sbjct: 2118 QK---ITRVACGSSHSVA 2132



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 2977 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3031

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 3032 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 3089

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 3090 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 3125



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 153/383 (39%), Gaps = 56/383 (14%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV--QLIGGEQTLFAVTADGKLYAT 2820

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    ++Y +G  
Sbjct: 2821 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GELYSWGEA 2877

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
            + G+LG           P+V   L  +E+V I+A G  SA ++A G LYTWG+G      
Sbjct: 2878 EDGKLGHGNRS--PCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG 2935

Query: 264  NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            +  S+      L  +L   +        G    L LT D  V   G   +G L       
Sbjct: 2936 HGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 2995

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFP 370
               P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S      
Sbjct: 2996 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 3050

Query: 371  PFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLG 411
            P  +       VIA            E+  + TWG  + GQLG G T     P++V  L 
Sbjct: 3051 PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 3110

Query: 412  DEFQNRDTQLEVFCGSGFTYAIS 434
             +  NR     V CGS  T A S
Sbjct: 3111 GKKINR-----VACGSAHTLAWS 3128



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 3080 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKL 3138


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 180/411 (43%), Gaps = 70/411 (17%)

Query: 49  TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
           +G   D L P+ L  +    V  ++CGG H   +T       G+V+SWG  S G+LGHG 
Sbjct: 293 SGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVTK-----QGEVYSWGEESGGRLGHG- 346

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSH 166
            VD   P+P          I  ++ G  H+  V+ SG L+T G+GT  FG LGHG+  SH
Sbjct: 347 -VDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSH 405

Query: 167 SSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
             P +++  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR +S+S+
Sbjct: 406 WMPKRLNGPLEGIHVSSISCGPWHTAVVTS---AGQLFTFGDGSFGVLG-HGDR-QSLSV 460

Query: 226 PQVTIGLHDIEIVGISAN------------GDRSAALSAEGHLYTWGRGFNST-----SD 268
           P+    L  +  V  +              G+ S +  + G ++TWG G          D
Sbjct: 461 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKD 520

Query: 269 VNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                +  +SL   +F Q A G    + LT  G V  +G S +G L +P+      P  V
Sbjct: 521 TRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ-ADGMVPARV 579

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
             +   N     V +I+ GA H AV+T +                            + T
Sbjct: 580 EGKLHKNF----VEEISCGAYHVAVLTSRTE--------------------------VYT 609

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           WG G +G+LG G+T D+  P +V    + Q R     V CG  FT AI  H
Sbjct: 610 WGKGANGRLGHGDTDDRNSPTLVEALKDKQVR----SVVCGINFTAAICIH 656



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG  + G+LG G   D   P+L+   +  ++ ++ACG  H  A+T     + G ++
Sbjct: 331 EVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVT-----LSGDLY 385

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK +    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 386 TWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 443

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 444 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKI 503

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT G  
Sbjct: 504 FTWGDGDKGRLGHGDKDTRLV--PTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSS 561

Query: 263 F-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                 N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 562 VYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 618



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      +   +ACG    +ALT+      G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTT-----SGHVY 556

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 557 TMGSSVYGQLGNPQ-ADGMVPARV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  G+LGHGD    +SP  V +  +K V  + CG+  +  +
Sbjct: 613 GANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAI 653


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 158/327 (48%), Gaps = 30/327 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPSSVIG 90
            K+++ G  T+G+LG G     + PQ   L+SLS   +    +  GG H +ALT     + 
Sbjct: 2967 KLFACGEATNGRLGLGISAGNV-PQPRQLTSLSQYVIKKVAVHSGGRHAMALT-----VD 3020

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  +  I+ G +HS  +  +G L+T 
Sbjct: 3021 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKR--VRDIACGGSHSAAIISNGDLYTW 3078

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGK 209
            G G +G+LGHGD  +   P  V +   + V Q+A G R +  L L D     VY +G G 
Sbjct: 3079 GLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTD--SGTVYSWGDGD 3136

Query: 210  RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
             G+LG  +      S+P     L+ + +  I      S AL+  G ++TWG+      G 
Sbjct: 3137 FGKLG--RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGH 3194

Query: 264  NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
             + + V  PQ + +      +  A+G  H L +  +G+V   G + HG   +     + +
Sbjct: 3195 GTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRK 3254

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHS 348
            P   AL  V  L+G K+ ++A G+ HS
Sbjct: 3255 P---AL--VQGLEGCKISRVACGSSHS 3276



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P+ +       V  +A GGAH   +TS      G+++
Sbjct: 4043 EVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITS-----TGELY 4097

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            SWG+G  G+LGHG+  D   PK V    G+R T     +G   +  ++D   +++ GDG 
Sbjct: 4098 SWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGD 4157

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ +     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4158 YGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4214

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              ++D IR    P+    L   +IV I+       A +  G +YTWG
Sbjct: 4215 HGTEDHIRR---PRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWG 4258



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 37/346 (10%)

Query: 47  LGTGRLH---DELSPQLLN-LSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGR 98
           L TGR++   +   PQ ++ +S+L+ + ++       G+H LALTS      G V+SWG 
Sbjct: 450 LRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSE-----GDVYSWGN 504

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
           G  G+LGHG+ V      P+   + H  ++ +++ G +HS  ++ SG LFT G G+FG+L
Sbjct: 505 GDFGKLGHGDTVTC--DSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRL 562

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           G G      +P  VS  +   V  +ACG   +  +     G+ VY +G G+ G+LG  + 
Sbjct: 563 GLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGS-VYSWGDGEYGKLG--RG 619

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP 272
                  P++   L  +++  +      SAA+   G ++TWG       G  +   V  P
Sbjct: 620 GSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFP 679

Query: 273 QSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           + + +      +  +LG +H L  T +GE+L  G +  G L +        P   A    
Sbjct: 680 RQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAA---- 735

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
            +L G  +I I   +  +      F W R    +  P   PF ++V
Sbjct: 736 -SLLGKCIIGITCSSAQT------FAWSRPSRGTMIPMRIPFVVDV 774



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 10/226 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G      SP L+N     SV  +ACG  H  A+T+      G++F+
Sbjct: 499 VYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITA-----SGELFT 553

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRGS G+LG G   D L P  V+   G         +G   +  ++D+G +++ GDG +
Sbjct: 554 WGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEY 613

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G      +P  V      +V ++ CG ++S  +   C    V+ +G+G+  +LG 
Sbjct: 614 GKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV---CKNGAVFTWGNGEGYKLGH 670

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
             +    V  P+    L    +  +S       A + EG L +WGR
Sbjct: 671 GTE--EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGR 714



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 139/363 (38%), Gaps = 95/363 (26%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL++      G+V+SWG G  G+LGHG       P+ +    G    +  I+AG
Sbjct: 4031 GGKHCLALSAE-----GEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKE--VVDIAAG 4083

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLV 192
              HS  ++ +G L++ G G +G+LGHGD    + P  V +     V  +AC  G   +L 
Sbjct: 4084 GAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLC 4143

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       +P     L  + ++ +      S AL+ 
Sbjct: 4144 ITDD---DSVWSWGDGDYGKLG--RGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTK 4198

Query: 253  EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
             G +YTWG+G                                    +   LG      + 
Sbjct: 4199 SGAVYTWGKG------------------------------------DYHRLGHGTEDHIR 4222

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             P R ++             L G K++ IA G+ H    T                    
Sbjct: 4223 RPRRCTT-------------LQGKKIVSIACGSLHCVACT-------------------- 4249

Query: 373  FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTY 431
                  +   + TWG  + GQLG G T     P++V  L  +  NR     V CGS  + 
Sbjct: 4250 ------DAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR-----VACGSAHSL 4298

Query: 432  AIS 434
            A S
Sbjct: 4299 AWS 4301



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 170/417 (40%), Gaps = 59/417 (14%)

Query: 7    EETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL-LNLSS 65
            EE E  +++ +   K K     ++ Q  +V+ WG     QLG  +     +P +   LS+
Sbjct: 2888 EEAEGQRASQVMAKKVKCGSGVKDIQT-QVFVWGLNDKDQLGGPKGSKIKTPGINETLST 2946

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
            L  V ++  GG+  L   +      GK+F+ G  ++G+LG G +     P+P       +
Sbjct: 2947 LKCVQIV--GGSKSLFCVTQD----GKLFACGEATNGRLGLG-ISAGNVPQPRQLTSLSQ 2999

Query: 126  YTITHIS--AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
            Y I  ++  +G  H+  ++  G +F+ G+G  G+LGH    +   P  + +  +K V  I
Sbjct: 3000 YVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDI 3059

Query: 184  ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
            ACG  HS  ++ +     +Y +G G+ G+LG   +  +    P++   L    ++ + A 
Sbjct: 3060 ACGGSHSAAIISN---GDLYTWGLGEYGRLGHGDNTTQL--RPKLVKALEGQRVIQV-AL 3113

Query: 244  GDRSA---ALSAEGHLYTWG--------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVL 292
            G R A   AL+  G +Y+WG        RG +    V  P    + +   Q   G    L
Sbjct: 3114 GSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSL 3173

Query: 293  VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             LT  G+V   G   +  L         +P     + V  L G KV  +A GA H   V 
Sbjct: 3174 ALTKSGQVWTWGKGDYFRLGHGTDAHVRKP-----QLVETLKGKKVTHVAVGALHCLSVL 3228

Query: 353  GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                      +N  +  WG  +HGQ G   T     P +V 
Sbjct: 3229 --------------------------DNGQVYAWGDNDHGQQGNSTTTVNRKPALVQ 3259



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++      V  + CG    +ALT       G V++
Sbjct: 4150 VWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTK-----SGAVYT 4204

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+  T   G +  I  I+ G  H    +D+G ++T GD   
Sbjct: 4205 WGKGDYHRLGHGTEDHIRRPRRCTTLQGKK--IVSIACGSLHCVACTDAGEVYTWGDNDE 4262

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  HSL
Sbjct: 4263 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4298



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 12/182 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
           ++++WG G+ G+LG G   D L+P L++     +V  +ACG   A  +AL        G 
Sbjct: 550 ELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD-----TGS 604

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWG G  G+LG G       PK V    G    +T +  G  +S  V  +G +FT G+
Sbjct: 605 VYSWGDGEYGKLGRGGSEGCKAPKLVDKLQG--LDVTRVYCGPQYSAAVCKNGAVFTWGN 662

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G   +LGHG       P +V +   K+V  ++ G  H L   ++    ++  +G   +GQ
Sbjct: 663 GEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEE---GELLSWGRNDKGQ 719

Query: 213 LG 214
           LG
Sbjct: 720 LG 721



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G       P  +   +   V  + CG    LALT       G+V++
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTK-----SGQVWT 3183

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +TH++ G  H   V D+G ++  GD   
Sbjct: 3184 WGKGDYFRLGHGTDAHVRKPQLVETLKGKK--VTHVAVGALHCLSVLDNGQVYAWGDNDH 3241

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQ G+     +  P  V       + ++ACG  HS+
Sbjct: 3242 GQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSI 3277



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 70/320 (21%)

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           +H   ++  G +++ G+G FG+LGHGD  +  SP+ ++    K+V  +ACG  HS  +  
Sbjct: 488 SHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITA 547

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAE 253
                +++ +G G  G+LG+       +  P +  GL  + +V ++  +GD ++ AL+  
Sbjct: 548 ---SGELFTWGRGSFGRLGLGS--TEDILTPALVSGLLGVTVVDVACGSGDAQTIALADT 602

Query: 254 GHLYTWG------------RGFNSTSDVNCPQSLPSSLSFS----QAALGWNHVLVLTGD 297
           G +Y+WG             G  +   V+  Q L  +  +      AA+  N  +   G+
Sbjct: 603 GSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGN 662

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           GE   LG   HG     E V   R       +V  L G  V  ++ G+ H    T     
Sbjct: 663 GEGYKLG---HGT---EEHVRFPR-------QVETLAGKHVTSLSLGSHHCLATT----- 704

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQ 415
                                E   +++WG  + GQLG G+T  +  P      LG    
Sbjct: 705 ---------------------EEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCI- 742

Query: 416 NRDTQLEVFCGSGFTYAISR 435
                + + C S  T+A SR
Sbjct: 743 -----IGITCSSAQTFAWSR 757



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 61/294 (20%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +G L   D   H++P  +    +  ++ Q+AC     L+LL+     +VY   +    Q 
Sbjct: 410 WGWLSTSDATCHNTPTTIPLPNDLDDIIQVACSSNSLLILLRT---GRVYKMTNSAEPQ- 465

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRG----FNSTS 267
                     S+ +++  L DIEI+ ++A+  G    AL++EG +Y+WG G         
Sbjct: 466 ----------SMHEIST-LADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGD 514

Query: 268 DVNCPQSLPSS----LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP- 322
            V C   +  +     S    A G +H   +T  GE+   G    G L     + ST   
Sbjct: 515 TVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLG----LGSTEDI 570

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           L+ AL  VS L GV V+ +A G+  +  +                         +A+  +
Sbjct: 571 LTPAL--VSGLLGVTVVDVACGSGDAQTI------------------------ALADTGS 604

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + +WG GE+G+LG G +     PK+V   D+ Q  D    V+CG  ++ A+ ++
Sbjct: 605 VYSWGDGEYGKLGRGGSEGCKAPKLV---DKLQGLDVT-RVYCGPQYSAAVCKN 654



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 47/238 (19%)

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVG-----ISANGDRSAALSAEG 254
            Q++G+G   RGQLG V   +++     +    +  ++++G      S  GD    + A G
Sbjct: 3937 QIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGD--GKVCATG 3994

Query: 255  HLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGM 310
            +      G   T  V  P  + S   +   + A+  G  H L L+ +GEV   G    G 
Sbjct: 3995 YGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGK 4054

Query: 311  LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
            L    R    RP       + +L G +V+ IAAG  HSA +T                  
Sbjct: 4055 LGHGNRSPCDRP-----RAIESLRGKEVVDIAAGGAHSACITSTGE-------------- 4095

Query: 371  PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                        + +WG G +G+LG G++ DQ  PK+V+    ++  D    V CGSG
Sbjct: 4096 ------------LYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTD----VACGSG 4137



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 111/288 (38%), Gaps = 67/288 (23%)

Query: 175  FVNKNVHQIACGMRHSLVLLKDC--------LGNQVYGFGSGKRGQLGVSK-DRIRSVSL 225
              + N  + A G R S V+ K          +  QV+ +G   + QLG  K  +I++  +
Sbjct: 2881 LASDNEEEEAEGQRASQVMAKKVKCGSGVKDIQTQVFVWGLNDKDQLGGPKGSKIKTPGI 2940

Query: 226  PQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWGRGFNS-----TSDVNCPQSLPSSL 279
             +    L  ++IVG    G +S   ++ +G L+  G   N       S  N PQ  P  L
Sbjct: 2941 NETLSTLKCVQIVG----GSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQ--PRQL 2994

Query: 280  -SFSQAAL-------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
             S SQ  +       G  H + LT DG+V   G    G L    R++  +P       + 
Sbjct: 2995 TSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIE 3049

Query: 332  NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
             L   +V  IA G  HSA                           I  N  + TWG GE+
Sbjct: 3050 ALRSKRVRDIACGGSHSAA--------------------------IISNGDLYTWGLGEY 3083

Query: 392  GQLGLGNTCDQIHPKVVN-------LGDEFQNRDTQLEVFCGSGFTYA 432
            G+LG G+   Q+ PK+V        +     +RD Q      SG  Y+
Sbjct: 3084 GRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYS 3131



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++   V  GK+
Sbjct: 4253 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPVNAGKL 4311


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/411 (25%), Positives = 171/411 (41%), Gaps = 53/411 (12%)

Query: 11  KGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS 70
           K  +A ++N      E+E E++V   WS G  + G+LG G      S + +       + 
Sbjct: 542 KPPNAFVSNDTTIFHEDEGEREV---WSCGQNSYGELGHGDTASRKSFERIQALQQKEII 598

Query: 71  MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
            +  G  H + LT+      GKVF+ G   +GQ G G      +   +   D    +  H
Sbjct: 599 QIGAGNEHTVVLTA-----DGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGS-SQAH 652

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
              G  H+  VS  G + TCG    GQLGHG+  S S P  + S  NK V  ++C   H+
Sbjct: 653 AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 712

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           ++  +D     +Y FG    GQLG +    R +  PQ    L D +IV ++     +  +
Sbjct: 713 VLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTMVV 770

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
           +A G  + +G+      G ++  +   P  +   L   +      G+ H + L     + 
Sbjct: 771 TASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLF 830

Query: 302 MLGGSHHGMLS-DPERVSSTRPLSVALEKVSN------LDGVKVIQIAAGAEHSAVVTGK 354
             G + +G L       SST  L +  ++ SN      L+G  +++IA G  H+  V   
Sbjct: 831 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV--- 887

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                                  ++N  +  +G   HGQLG G+T ++++P
Sbjct: 888 -----------------------SDNGVMYVFGRNNHGQLGTGDTTERVYP 915



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 32/204 (15%)

Query: 17  INNAKPKIEEEEEEQQVV----------------KVWSWGAGTDGQLGTGRLHDELSP-Q 59
           I+   P+  E   +QQ+V                K +++G    GQLG   + ++L+P Q
Sbjct: 741 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQ 800

Query: 60  LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG----------EM 109
           +           + CG  H +AL S     G  +F++GR   GQLG G          ++
Sbjct: 801 VRGGLERQECLEIRCGYYHTIALCS-----GAHLFAFGRNDYGQLGLGRSNASSTSNLQL 855

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
               +       +     I  I+ G  H+  VSD+G ++  G    GQLG GD      P
Sbjct: 856 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP 915

Query: 170 VKVSSFVNKNVHQIACGMRHSLVL 193
             +  FV K V  +A G  H++VL
Sbjct: 916 FPIDDFVGKRVALVAAGFYHTVVL 939



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 137/333 (41%), Gaps = 66/333 (19%)

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
           KP   F  +  TI H   G            +++CG  ++G+LGHGD  S  S  ++ + 
Sbjct: 542 KPPNAFVSNDTTIFHEDEGERE---------VWSCGQNSYGELGHGDTASRKSFERIQAL 592

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVS-LPQVTIGLH 233
             K + QI  G  H++VL  D    +V+  G    GQ G     R+  +S +P++  G  
Sbjct: 593 QQKEIIQIGAGNEHTVVLTAD---GKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSS 649

Query: 234 DIEIVGISANG-DRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPS--SLSFSQ 283
                  + NG + +  +S +G + T G  +       N+TS+ + P+ + S  +     
Sbjct: 650 QAH----AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSE-SVPKIIRSLENKIVRL 704

Query: 284 AALGWNHVLVLTGDGEVLML---GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
            +  + H ++   DG +  L   G + +G L   + +    P     + V  L   +++ 
Sbjct: 705 VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIP-----QFVEALSDQQIVS 759

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
           +A G  H+ VVT                         A  +A   +G  ++GQLG+    
Sbjct: 760 VACGQYHTMVVT-------------------------ASGKA-FAFGKNDYGQLGIDTME 793

Query: 401 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           +Q+ P  V  G E   R   LE+ CG   T A+
Sbjct: 794 NQLAPVQVRGGLE---RQECLEIRCGYYHTIAL 823


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 168/401 (41%), Gaps = 54/401 (13%)

Query: 20  AKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGA 77
           ++P I  E    +   ++ WG+   G+LG G + DE  L P+ L+    + +  +ACG  
Sbjct: 12  SEPVIAVEYPLHKKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           + + +T       G+++S G    GQLGH +    L   P        +     + G  H
Sbjct: 72  YTVVITQI-----GEIYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYH 122

Query: 138 SGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           +  +++ G LF+ G  T GQLG +      SSP  V +     V QIACGM+H+  L  +
Sbjct: 123 TLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNN 182

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
               ++Y +GS   GQLG+  D I+    P+       I I  I+  G  S A+S  G +
Sbjct: 183 ---GELYSWGSNSEGQLGLGTD-IKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 257 YTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           + WG+      G N T D N P  L +  +     AA G    + LT DG V   G   +
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMY 298

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L      +   P      +V  L G  V QI+ G  H+                    
Sbjct: 299 GQLGHGSNSNEILP-----RQVMELMGSTVTQISCGKRHT-------------------- 333

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                + ++     +  WG G  GQLG  +T     P+VV+
Sbjct: 334 -----LALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVH 369



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG+ ++GQLG G  +  E+ P+ ++      ++ +ACGG H +A++       G V
Sbjct: 184 ELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISK-----SGAV 238

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  +  D   P  +      +  I + + G   S F++  G +FTCG G
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAK--ICYAACGEEFSVFLTVDGGVFTCGAG 296

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG   +   P +V   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 297 MYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 354

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G      RSV+ PQV  G
Sbjct: 355 G--NHSTRSVTTPQVVHG 370


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 194/450 (43%), Gaps = 83/450 (18%)

Query: 23  KIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAH 78
           ++EE ++  QV +    ++ WG     + GT  +   L P+ ++L++   +  +ACGG H
Sbjct: 432 ELEEGDDATQVEEPSSCMYVWGRPPSLEGGTPLV---LRPKHVSLANGQPIVQVACGGEH 488

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP----------VTFFDGH---- 124
           +L LTS      G V+S+G     ++    +       P           +F   H    
Sbjct: 489 LLYLTS-----TGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLVEE 543

Query: 125 --------RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
                   R TI  ++ G  HS  ++D+G L+T G G  G+LGHGD R  + P KV S +
Sbjct: 544 LALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLL 603

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            ++V   +CG  H+ VL        V+ FG G+ G+LG+  ++ R    P   +G     
Sbjct: 604 RESVVSASCGGAHTAVLTAK---GSVFTFGRGRNGRLGLGDNKWRDT--PHPIVGFPQGT 658

Query: 237 IVGISANG-DRSAALSAEGHLYTWGR---GFNSTSDVNCPQSLPSSL---------SFSQ 283
            + +   G + +AAL  +G ++TWG+   G      V+  Q +P  +         S   
Sbjct: 659 SISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVD 718

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A G+ H +VLT  GE+   G   +G L   + V    P  V L   +     ++ ++  
Sbjct: 719 VACGYTHTVVLTASGELYSWGLGEYGQLGTGD-VYQPLPARVQLPADALCAPDQLARVYC 777

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI 403
           GA HS   T                          E R +  WG   +G  GLG+T ++ 
Sbjct: 778 GAFHSIATT--------------------------EQRVMFAWGLNSYGACGLGHTANKD 811

Query: 404 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            P+ +   D F ++ T+L V CG  +T A+
Sbjct: 812 KPERI---DCFSSQ-TELVVACGHKYTIAL 837


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 164/384 (42%), Gaps = 54/384 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG    G+LG G + DE  L P  ++    S +  +ACG  + + +T       GK+
Sbjct: 33  MFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITH-----DGKI 87

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +S G    GQLGH      L  + +   D   +    ++ G  H+  V++ G LF+ G  
Sbjct: 88  YSCGNNDYGQLGHERGRKRL--QLILGLDA--FVFKKVACGAYHTIAVNEWGQLFSWGSN 143

Query: 154 TFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG +       SP  V +     + Q+ACGM+H+L L  +    ++Y +GS   GQ
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNN---GELYSWGSNSEGQ 200

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+  D IRS   P++   L  + I  I+  G  S A+S  G ++ WG+      G N T
Sbjct: 201 LGLGVD-IRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDT 259

Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            + N P  L +  +     AA G    + LT DG V   G   +G L      +   P  
Sbjct: 260 QNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILP-- 317

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +V  L G  V QI+ G  H+                         + ++     + 
Sbjct: 318 ---RQVMELMGSTVTQISCGKRHT-------------------------LALVPSQGRVY 349

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVV 408
            WG G  GQLG  +T     P+VV
Sbjct: 350 AWGLGGAGQLGNNSTRSIPTPQVV 373



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG+ ++GQLG G  +  E+ P+L+N  +   ++ +ACGG H +A++       G +
Sbjct: 189 ELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK-----SGAI 243

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  +  +   P  +      +  I + + G   S F++  G +FTCG G
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAK--ICYAACGEEFSVFLTVDGGVFTCGAG 301

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG   +   P +V   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 302 MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPS--QGRVYAWGLGGAGQL 359

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G   +  RS+  PQV  G
Sbjct: 360 G--NNSTRSIPTPQVVHG 375



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 124/248 (50%), Gaps = 21/248 (8%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG+ ++GQLG   +   E SP+++     S +  +ACG  H LALT+      G++
Sbjct: 136 QLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTN-----NGEL 190

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +SWG  S GQLG G ++   + PK +    G    I  I+ G  HS  +S SG +F  G 
Sbjct: 191 YSWGSNSEGQLGLGVDIRSEVKPKLINTLAG--VPIAFIACGGYHSIAISKSGAIFGWGK 248

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            TFGQLG  D ++ + P ++ +  N  +   ACG   S+ L  D     V+  G+G  GQ
Sbjct: 249 NTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVD---GGVFTCGAGMYGQ 305

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG------RGFNS 265
           LG   +   +  LP+  + L    +  IS     + AL  ++G +Y WG       G NS
Sbjct: 306 LGHGSN--NNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNS 363

Query: 266 TSDVNCPQ 273
           T  +  PQ
Sbjct: 364 TRSIPTPQ 371



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 48/273 (17%)

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
            G +F  G+   G+LG G         P +V       + QIACG  +++V+  D    +
Sbjct: 30  KGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHD---GK 86

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           +Y  G+   GQLG  + R R     Q+ +GL       ++     + A++  G L++WG 
Sbjct: 87  IYSCGNNDYGQLGHERGRKRL----QLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGS 142

Query: 262 ------GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                 G NS + + C   +  +L  S   Q A G  H L LT +GE+   G +  G L 
Sbjct: 143 NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
               + S     V  + ++ L GV +  IA G  HS                        
Sbjct: 203 LGVDIRS----EVKPKLINTLAGVPIAFIACGGYHSIA---------------------- 236

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
               I+++ AI  WG    GQLGL +T ++  P
Sbjct: 237 ----ISKSGAIFGWGKNTFGQLGLNDTQNRNLP 265


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 12/227 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VWSWGAG  G+LG G    +  P ++       V  + CG ++  A+T     I G++F
Sbjct: 588 EVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAIT-----IAGELF 642

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGRG+ G+LGHG   D L P  V     ++     + +G  HS  V+D+G LF  GDG 
Sbjct: 643 TWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGD 702

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FG+LG+G       PV++ + V  NV +I  G + S+ L   C G  +Y +G G  G+LG
Sbjct: 703 FGKLGNGSCNGSPIPVQIDTLV--NVSRIYSGSQFSVAL--SCDGT-LYTWGKGHGGRLG 757

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
                  +V  P++   L   +I  ++       AL++ G LY WGR
Sbjct: 758 HGNSEHSNV--PKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGR 802



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P+L+   S   V  +ACG AH   +TS      G V 
Sbjct: 4044 EVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQ-----GHVL 4098

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4099 TWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4158

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L +      VY +G G   +LG
Sbjct: 4159 YGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4215

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              + D +R    P+    L   +I+ I+       A S  G ++TWG
Sbjct: 4216 HGNTDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVFTWG 4259



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 126/288 (43%), Gaps = 27/288 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+VFSWG G  G+LGHG       PK +    G    +  I+ G
Sbjct: 4032 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSG--IGVIDIACG 4084

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++  G + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4085 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4144

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       +P     L  + ++ +      S AL+ 
Sbjct: 4145 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTR 4199

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        +T  V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4200 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWG 4259

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +  G L D    +  RP       V +L G  ++++  G+ H+  ++
Sbjct: 4260 DNDEGQLGDGTVTAIQRP-----RLVQSLQGKHIVKVICGSAHTLALS 4302



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 168/417 (40%), Gaps = 55/417 (13%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            KV  WG     QLG  +      P   + LS L  + +   GG+  L + S      GK+
Sbjct: 2893 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--AGGSKSLFIVSQD----GKL 2946

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++ G G++G+LG G   +   P+ V   + +      + +G  H+  ++  G +F+ G+G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHG+  +   P  + S   K V  IACG  HS  +       ++Y +G G+ G+L
Sbjct: 3007 EDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3063

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFNS 265
            G   +  +       T+  H +  V   +   ++  L+ EG +++W        GRG + 
Sbjct: 3064 GHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3123

Query: 266  TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
               V       +S+   Q   G    L LT  GEV   G   +  L         +P   
Sbjct: 3124 GCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP--- 3180

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
                +  L G KVI +A GA H   VT                          ++  +  
Sbjct: 3181 --TPIQGLRGKKVIHVAVGALHCLAVT--------------------------DSGQVYA 3212

Query: 386  WGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 441
            WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A S    PS+
Sbjct: 3213 WGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNR-----VACGSSHSVAWSLPQNPSE 3264



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 11/160 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
            VWSWG G  G+LG G       P  + + SL+ + ++   CG    +ALT       G V
Sbjct: 4151 VWSWGDGDYGKLGRGGSDGCKIP--MKIESLAGLGVIKVECGSQFSVALTR-----SGSV 4203

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG+G   +LGHG       PK V    G +  I  I+ G  H    SDSG +FT GD 
Sbjct: 4204 YTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK--IISIATGSLHCVACSDSGEVFTWGDN 4261

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
              GQLG G   +   P  V S   K++ ++ CG  H+L L
Sbjct: 4262 DEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 172/418 (41%), Gaps = 65/418 (15%)

Query: 36   VWSWGAGTDGQLGT---GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
            ++ WG    GQLG     R+      + L+L  L  + +   GG   L   +P     GK
Sbjct: 3939 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSL--LRPIQI--AGGEQTLYAVTPD----GK 3990

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            +++ G G+ G+LG G       P  V            +++G  H   +S  G +F+ G+
Sbjct: 3991 LYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGE 4050

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
            G  G+LGHG+  S+  P  + +     V  IACG  HS      C+ +Q  V  +G G+ 
Sbjct: 4051 GEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSA-----CITSQGHVLTWGKGRY 4105

Query: 211  GQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
            G+L  G S+D+++   L +  +G   I+I   S +  ++  ++ + ++++WG       G
Sbjct: 4106 GRLGHGDSEDQLQP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLG 4163

Query: 263  FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
               +     P  + S   L   +   G    + LT  G V   G   +  L         
Sbjct: 4164 RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVR 4223

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            RP     +KV+ L G K+I IA G+ H    +                          ++
Sbjct: 4224 RP-----KKVAALQGKKIISIATGSLHCVACS--------------------------DS 4252

Query: 381  RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 438
              + TWG  + GQLG G       P++V      Q +   ++V CGS  T A+S + L
Sbjct: 4253 GEVFTWGDNDEGQLGDGTVTAIQRPRLVQ---SLQGKHI-VKVICGSAHTLALSTYQL 4306



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 145/353 (41%), Gaps = 45/353 (12%)

Query: 19  NAKPKIEEEEEEQQVVKVWS------WGAGTDGQLGTGRLHDEL---SPQLLNLSSLSSV 69
           N   K+ + + ++     WS      +G  ++   GT +L   +   S   + L S   V
Sbjct: 466 NYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQV 525

Query: 70  SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
             +AC   ++  LT+     GG+VFS    SS         + + PK     +G      
Sbjct: 526 RQVACTENNIYILTT-----GGQVFSLHSNSS---------ENIAPKAFEGLEGVHVVQI 571

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
                  H   +S +  +++ G G  G+LGHGD  S   P  +     K V  I CG  +
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASY 631

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGIS-ANGD- 245
           S  +    +  +++ +G G  G+L  G S D++    +P     L   ++V ++  +GD 
Sbjct: 632 SAAI---TIAGELFTWGRGTYGRLGHGNSDDKL----VPTQVQALKSYKVVDVALGSGDA 684

Query: 246 RSAALSAEGHLYTWGRG-FNSTSDVNC-----PQSLPSSLSFSQAALGWNHVLVLTGDGE 299
            S  ++  G L+ WG G F    + +C     P  + + ++ S+   G    + L+ DG 
Sbjct: 685 HSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGT 744

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           +   G  H G L       S  P     + V  L+G K+  +A G+ H   +T
Sbjct: 745 LYTWGKGHGGRLGHGNSEHSNVP-----KLVRALEGKKIADVAVGSAHCLALT 792



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 58/265 (21%)

Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--- 214
           H +   + +P         +V QIA  C  +H +VL      N+V+ +G+G  G+LG   
Sbjct: 548 HSNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSS---ANEVWSWGAGDGGRLGHGD 604

Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTS 267
            VSK+       P + +GLH+ ++ GI      SAA++  G L+TWGRG        ++ 
Sbjct: 605 TVSKEH------PTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSD 658

Query: 268 DVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           D   P  + +  S+     ALG    H + +T +G +   G    G L +     S  P+
Sbjct: 659 DKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS--PI 716

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            V ++ + N     V +I +G++ S  ++                           +  +
Sbjct: 717 PVQIDTLVN-----VSRIYSGSQFSVALSC--------------------------DGTL 745

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVV 408
            TWG G  G+LG GN+     PK+V
Sbjct: 746 YTWGKGHGGRLGHGNSEHSNVPKLV 770



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 42/160 (26%)

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
           LPS+L   Q A   N++ +LT  G+V  L               S    ++A +    L+
Sbjct: 519 LPSTLQVRQVACTENNIYILTTGGQVFSL--------------HSNSSENIAPKAFEGLE 564

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
           GV V+QIAA  E   V+                        V++    + +WG G+ G+L
Sbjct: 565 GVHVVQIAAHCEGKHVM------------------------VLSSANEVWSWGAGDGGRL 600

Query: 395 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           G G+T  + HP ++    E Q       ++CG+ ++ AI+
Sbjct: 601 GHGDTVSKEHPTMIVGLHEKQ----VCGIYCGASYSAAIT 636


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 25/297 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G   D  +P ++    L +V  +A G +H+LAL +      G V++
Sbjct: 111 VWTWGWNEYGQLGDGTTMDHNTPGMV--GGLGNVRAVAVGISHMLALGND-----GTVWA 163

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+ + GQLG G  VD++ P  V+        I  ISAG+NH+  + D+G ++T G    
Sbjct: 164 WGKNNCGQLGDGTNVDSMTPVRVSGLP----RIVAISAGYNHNLAIDDAGNVWTWGLNDC 219

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S  +P KV      NV  +A G   SL L  D     ++ +GS  +G+LGV
Sbjct: 220 GQLGDGTNISSPNPKKVKGLA--NVTAVAGGSSFSLALKDD---GTIWAWGSNVQGELGV 274

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW-----GRGFNSTSDVN 270
                +   LP    GL +  ++ I+A G+ SAA++ +G L+ W     G+  +   D +
Sbjct: 275 GT--TKDCPLPVKVQGLTN--VIRIAAGGETSAAITNDGSLWVWGHNEQGKYISGGEDAS 330

Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            P+      +     +G  +++ L  DG + ++G +  G L          P  VA+
Sbjct: 331 SPRRASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARVAI 387



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 155/370 (41%), Gaps = 70/370 (18%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++WG    G LG+  + D   PK V       Y +T + + +     + D G ++T 
Sbjct: 60  GTVWTWGHSWHGGLGYESVQDQYVPKRVPI-----YNVTSVDSCFASVAALKDDGTVWTW 114

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   +GQLG G    H++P  V      NV  +A G+ H L L  D     V+ +G    
Sbjct: 115 GWNEYGQLGDGTTMDHNTPGMVGGL--GNVRAVAVGISHMLALGND---GTVWAWGKNNC 169

Query: 211 GQLG-----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW------ 259
           GQLG      S   +R   LP+         IV ISA  + + A+   G+++TW      
Sbjct: 170 GQLGDGTNVDSMTPVRVSGLPR---------IVAISAGYNHNLAIDDAGNVWTWGLNDCG 220

Query: 260 --GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G G N +S    P+ +    + +  A G +  L L  DG +   G +  G L     V
Sbjct: 221 QLGDGTNISSP--NPKKVKGLANVTAVAGGSSFSLALKDDGTIWAWGSNVQGELG----V 274

Query: 318 SSTR--PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH-WV---------------- 358
            +T+  PL V ++ ++N     VI+IAAG E SA +T     WV                
Sbjct: 275 GTTKDCPLPVKVQGLTN-----VIRIAAGGETSAAITNDGSLWVWGHNEQGKYISGGEDA 329

Query: 359 ----RLFIISYTPFFPPFFINVIAENRAIMTWGWGEH--GQLGLGNTCDQIHPKVVNLGD 412
               R   +S         IN+IA       W  G++  GQLG GNT D+  P  V +G 
Sbjct: 330 SSPRRASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARVAIGS 389

Query: 413 E--FQNRDTQ 420
              F   +TQ
Sbjct: 390 NVGFAQNNTQ 399


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 12/182 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WG   DGQLG GR+    S P+++ NLS +  V + A G AH +AL+     + G 
Sbjct: 172 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 225

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWGR   GQLG G   +   P  +   D  +  +  ++ G +H+  ++ SG +FT GD
Sbjct: 226 VYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQK--VEFLACGGSHTALLTKSGLVFTFGD 283

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH   ++   P  V+  V   V QIACG +H+L  + D    +V+ FGSGK GQ
Sbjct: 284 GKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDM--GKVFSFGSGKEGQ 341

Query: 213 LG 214
           LG
Sbjct: 342 LG 343



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 42/241 (17%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           KN+ QI CG  HSL L K   G +++ +G    GQLGV +    S S P++   L  + +
Sbjct: 152 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 207

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
           V ISA    S ALS  G++Y+WGR      G   T + + P  + +         A G +
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGS 267

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H  +LT  G V   G   +G L      +  RP  VA      L G +V QIA G +H+ 
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVA-----GLVGNRVTQIACGRQHT- 321

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                   +  +++   + ++G G+ GQLG G TC+Q+ P+ + 
Sbjct: 322 ------------------------LAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMK 357

Query: 410 L 410
           L
Sbjct: 358 L 358



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++G G  GQLG     +EL P L+     + V+ +ACG  H LA  S      GKVFS
Sbjct: 278 VFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDM----GKVFS 333

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTF 120
           +G G  GQLG+G   + L P+P+  
Sbjct: 334 FGSGKEGQLGNGGTCNQLMPRPMKL 358


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 179/414 (43%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   + S++  +ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTT-----GELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    P+ ++   +G    I ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FG LGHG+ +S S P +V S        +ACG+ H+  +                  
Sbjct: 210 DGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
                                  +E++       +S+A  + G L+TWG G         
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +     C  SL     F + A G +  + LT  G+V  +G S +G L +P   S  RP
Sbjct: 284 KEARLKPTCVASLI-DYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPN--SDGRP 340

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             V  +  S      V+QIA G+ H AV+T +                            
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSE-------------------------- 370

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 371 VFTWGKGANGRLGHGDVEDRKVPTTV---EALRDRAVR-HIACGANFTAAICLH 420


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 33/337 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG G  G+LG G   D   P+ ++         LACG  H  A+T       G ++
Sbjct: 307 EIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQ-----SGDLY 361

Query: 95  SWGRGSSG--QLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           SWG G+     LGHG       PK VT  D     ++ ++ G  H+  V+ SG LFT GD
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTG-DLQGLYVSDVACGPWHTAVVASSGQLFTFGD 420

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK----------DCLGNQV 202
           GTFG LGHGD RS S P +V S +   V ++ACG+ H+  +++          D    QV
Sbjct: 421 GTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQV 480

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G++GQLG   +  +   LP+  I L +  I  ++     + + ++ GH+YT    
Sbjct: 481 FTWGDGEKGQLGHGDNDTK--LLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGST 538

Query: 259 -WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N T+  N P+ +   +   S  + A G  HV VLT   E+   G   +G L   
Sbjct: 539 AYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 598

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +   P  V       L   +V  I  G+  +AV+
Sbjct: 599 NVENKREPAVVGF-----LREKQVKAITCGSNFTAVI 630



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 187/433 (43%), Gaps = 80/433 (18%)

Query: 36  VWSWGAG-TDGQL-GTGR-----LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
           V+ WG   +DG L GTG        D L P+ L  + +     +ACG  H + +T     
Sbjct: 249 VFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTK---- 304

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++FSWG G  G+LGHG   DA  PK ++   G  +    ++ G  H+  ++ SG L+
Sbjct: 305 -QGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFK--SLACGDFHTCAITQSGDLY 361

Query: 149 TCGDGT--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           + GDGT     LGHG+  S   P +V+       V  +ACG  H+ V+       Q++ F
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVAS---SGQLFTF 418

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVT---IGL----------HDIEIVGISANGDRSAALSA 252
           G G  G LG   DR RS S+P+     IGL          H   +V ++     +   S+
Sbjct: 419 GDGTFGALG-HGDR-RSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSS 476

Query: 253 EGHLYTWG--------RGFNSTSDV-NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
            G ++TWG         G N T  +  C  SL ++ +  Q A G +  +  T  G V  +
Sbjct: 477 RGQVFTWGDGEKGQLGHGDNDTKLLPECVISL-TNENICQVACGHSLTVSRTSRGHVYTM 535

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G + +G L +P       P  V  + V       V +IA G+ H AV+T K         
Sbjct: 536 GSTAYGQLGNPT-AKGNFPERVEGDIVE----ASVEEIACGSYHVAVLTSKSE------- 583

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 423
                              I TWG G +GQLG GN  ++  P VV    E Q +     +
Sbjct: 584 -------------------IYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVK----AI 620

Query: 424 FCGSGFTYAISRH 436
            CGS FT  I  H
Sbjct: 621 TCGSNFTAVICVH 633


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 33/337 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG G  G+LG G   D   P+ ++         LACG  H  A+T       G ++
Sbjct: 320 EIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQ-----SGDLY 374

Query: 95  SWGRGSSG--QLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           SWG G+     LGHG       PK VT  D     ++ ++ G  H+  V+ SG LFT GD
Sbjct: 375 SWGDGTHNVDLLGHGNESSCWIPKRVTG-DLQGLYVSDVACGPWHTAVVASSGQLFTFGD 433

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK----------DCLGNQV 202
           GTFG LGHGD RS S P +V S +   V ++ACG+ H+  +++          D    QV
Sbjct: 434 GTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQV 493

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G++GQLG   +  +   LP+  I L +  I  ++     + + ++ GH+YT    
Sbjct: 494 FTWGDGEKGQLGHGDNDTK--LLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGST 551

Query: 259 -WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N T+  N P+ +   +   S  + A G  HV VLT   E+   G   +G L   
Sbjct: 552 AYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 611

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +   P  V       L   +V  I  G+  +AV+
Sbjct: 612 NVENKREPAVVGF-----LREKQVKAITCGSNFTAVI 643



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 130/433 (30%), Positives = 187/433 (43%), Gaps = 80/433 (18%)

Query: 36  VWSWGAG-TDGQL-GTGR-----LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
           V+ WG   +DG L GTG        D L P+ L  + +     +ACG  H + +T     
Sbjct: 262 VFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTK---- 317

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++FSWG G  G+LGHG   DA  PK ++   G  +    ++ G  H+  ++ SG L+
Sbjct: 318 -QGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFK--SLACGDFHTCAITQSGDLY 374

Query: 149 TCGDGT--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           + GDGT     LGHG+  S   P +V+       V  +ACG  H+ V+       Q++ F
Sbjct: 375 SWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVAS---SGQLFTF 431

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVT---IGL----------HDIEIVGISANGDRSAALSA 252
           G G  G LG   DR RS S+P+     IGL          H   +V ++     +   S+
Sbjct: 432 GDGTFGALG-HGDR-RSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSS 489

Query: 253 EGHLYTWG--------RGFNSTSDV-NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
            G ++TWG         G N T  +  C  SL ++ +  Q A G +  +  T  G V  +
Sbjct: 490 RGQVFTWGDGEKGQLGHGDNDTKLLPECVISL-TNENICQVACGHSLTVSRTSRGHVYTM 548

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G + +G L +P       P  V  + V       V +IA G+ H AV+T K         
Sbjct: 549 GSTAYGQLGNPT-AKGNFPERVEGDIVE----ASVEEIACGSYHVAVLTSKSE------- 596

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 423
                              I TWG G +GQLG GN  ++  P VV    E Q +     +
Sbjct: 597 -------------------IYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVK----AI 633

Query: 424 FCGSGFTYAISRH 436
            CGS FT  I  H
Sbjct: 634 TCGSNFTAVICVH 646


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 148/310 (47%), Gaps = 31/310 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG  T GQLG G   D  +   + +S L  V  +ACG  H +AL +      G V++
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTA--VPVSGLDGVIAIACGVNHSMALRND-----GTVWT 398

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G  V      P++  DG    I  I+ G +HS  + D G ++  GD  +
Sbjct: 399 WGFNAFGQLGDGTKVSKNTAVPISGLDG----IIAITCGTSHSMALKDDGTVWAWGDNQY 454

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G + S+++P +VS+     +  I CG   S  L  D     V+ +G+ + G+LG 
Sbjct: 455 GQLGNGTFISNTTPSQVSNL--SGIKSIFCGYSTSFALKPD---GTVWAWGNNEYGELG- 508

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSD-VNCPQ 273
            K     V  P  T+ + DI+ + I ++     AL  +G ++ WG   +    D     +
Sbjct: 509 -KGFTTRVIYPTETLNIGDIKAISIGSS--HCLALKNDGTVWAWGDNRYGQLGDGTTTIK 565

Query: 274 SLPSSLS----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           SLP  +S     +  + G +H L L  DG V   G ++ G L D  +     P+     +
Sbjct: 566 SLPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPV-----Q 620

Query: 330 VSNLDGVKVI 339
           VS L G+ VI
Sbjct: 621 VSELSGITVI 630



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 156/378 (41%), Gaps = 63/378 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G  + +  P    +  LS +  ++CG  + +AL +      G V+ 
Sbjct: 296 VWAWGDNESGQLGDGTTNSKYIPS--QVQGLSGIVSISCGFYYSMALKND-----GTVWV 348

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  +SGQLG G   D     PV+  DG    +  I+ G NHS  + + G ++T G   F
Sbjct: 349 WGDNTSGQLGDGTTTDRNTAVPVSGLDG----VIAIACGVNHSMALRNDGTVWTWGFNAF 404

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S ++ V +S      +  I CG  HS+ L  D     V+ +G  + GQLG 
Sbjct: 405 GQLGDGTKVSKNTAVPISGL--DGIIAITCGTSHSMALKDD---GTVWAWGDNQYGQLG- 458

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNSTS 267
                 S + P     L  I+   I      S AL  +G ++ WG        +GF  T+
Sbjct: 459 -NGTFISNTTPSQVSNLSGIK--SIFCGYSTSFALKPDGTVWAWGNNEYGELGKGF--TT 513

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            V  P    +       ++G +H L L  DG V   G + +G L D      + P+    
Sbjct: 514 RVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPV---- 569

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +VS + G+  I  +AG  HS                            +  +  +  WG
Sbjct: 570 -QVSGISGITAI--SAGGSHSLA--------------------------LKSDGTVWAWG 600

Query: 388 WGEHGQLGLGNTCDQIHP 405
               GQLG G   D+  P
Sbjct: 601 QNNVGQLGDGTKEDRNTP 618



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 166/386 (43%), Gaps = 64/386 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+ G    GQLG     D  SP  + +  L+ VS ++ G  + +AL S      G V++
Sbjct: 196 VWACGENDYGQLGNNNTIDINSP--IPVEGLNKVSSISAGKYYSMALKSD-----GTVWT 248

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G     L P  V    G    I  IS+G +HS  + D G ++  GD   
Sbjct: 249 WGENDYGQLGDGTTATRLSPVQVQNLSG----IIAISSGNSHSLALKDDGTVWAWGDNES 304

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S   P +V       +  I+CG  +S+ L  D     V+ +G    GQLG 
Sbjct: 305 GQLGDGTTNSKYIPSQVQGL--SGIVSISCGFYYSMALKND---GTVWVWGDNTSGQLGD 359

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
                R+ ++P    GL  +  + I+   + S AL  +G ++TWG  FN+   +     +
Sbjct: 360 GTTTDRNTAVP--VSGLDGV--IAIACGVNHSMALRNDGTVWTWG--FNAFGQLGDGTKV 413

Query: 276 PSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             + +   + L        G +H + L  DG V   G + +G L +   +S+T P     
Sbjct: 414 SKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP----- 468

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +VSNL G+K I                         Y+  F       +  +  +  WG
Sbjct: 469 SQVSNLSGIKSI----------------------FCGYSTSFA------LKPDGTVWAWG 500

Query: 388 WGEHGQLGLGNTCDQIHP-KVVNLGD 412
             E+G+LG G T   I+P + +N+GD
Sbjct: 501 NNEYGELGKGFTTRVIYPTETLNIGD 526



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 169/397 (42%), Gaps = 64/397 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G      +P    +S+LS +  + CG +   AL        G V++
Sbjct: 446 VWAWGDNQYGQLGNGTFISNTTPS--QVSNLSGIKSIFCGYSTSFALKPD-----GTVWA 498

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    G+LG G     +YP   T   G    I  IS G +H   + + G ++  GD  +
Sbjct: 499 WGNNEYGELGKGFTTRVIYPTE-TLNIGD---IKAISIGSSHCLALKNDGTVWAWGDNRY 554

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
           GQLG G     S PV+VS      +  I+ G  HSL L  D     V+ +G    GQLG 
Sbjct: 555 GQLGDGTTTIKSLPVQVSGI--SGITAISAGGSHSLALKSD---GTVWAWGQNNVGQLGD 609

Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP- 272
              +DR   V + +++       I  IS    RS AL  +G ++ WG     +   N P 
Sbjct: 610 GTKEDRNTPVQVSELS------GITVISNCIYRSFALKNDGTVWVWG-----SDSYNLPL 658

Query: 273 --QSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              ++P  +S     +    G  H L L  DG V   G ++ G   D    ++  P+   
Sbjct: 659 EKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPV--- 715

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFIISYTPFFPPFF---------- 373
             +VS L GVK I  A G   S  +      + W R+ ++S +P     +          
Sbjct: 716 --QVSGLSGVKAI--AVGGNRSIALKSDGTVWQWGRI-LVSVSPSTVETWTTARQVDGLS 770

Query: 374 -INVIAENRA------IMTWGWGEHGQLGLGNTCDQI 403
            I  I+ N A      + TWG  ++GQLG G T  ++
Sbjct: 771 EIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARV 807



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 131/329 (39%), Gaps = 69/329 (20%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G    +  P  + +S +S ++ ++ GG+H LAL S      G V++
Sbjct: 546 VWAWGDNRYGQLGDGTTTIKSLP--VQVSGISGITAISAGGSHSLALKSD-----GTVWA 598

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDG-------------------------------- 123
           WG+ + GQLG G   D   P  V+   G                                
Sbjct: 599 WGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPL 658

Query: 124 HRYT----------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
            + T          I  I  G  H+  + + G ++  G   FGQ G G   + + PV+VS
Sbjct: 659 EKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVS 718

Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
                 V  IA G   S+ L  D     V+ +G   R  + VS   + + +  +   GL 
Sbjct: 719 GL--SGVKAIAVGGNRSIALKSD---GTVWQWG---RILVSVSPSTVETWTTARQVDGLS 770

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLS-FSQAALG 287
             EIV IS N     AL  +G ++TWG        + T+      +  S L   +  A  
Sbjct: 771 --EIVSISNN----VALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGVASS 824

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
               +VL  DG +   G ++ G L + ER
Sbjct: 825 DTTSMVLMNDGTIRAWGKNNFGQLGNGER 853



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 127/314 (40%), Gaps = 58/314 (18%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           I  +S G +H+  +   G ++ CG+  +GQLG+ +    +SP+ V    NK V  I+ G 
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGL-NK-VSSISAGK 234

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            +S+ L  D     V+ +G    GQL  G +  R+  V +  ++       I+ IS+   
Sbjct: 235 YYSMALKSD---GTVWTWGENDYGQLGDGTTATRLSPVQVQNLS------GIIAISSGNS 285

Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
            S AL  +G ++ WG       G  +T+    P  +         + G+ + + L  DG 
Sbjct: 286 HSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALKNDGT 345

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V + G +  G L D    ++ R  +V    VS LDG  VI IA G  HS           
Sbjct: 346 VWVWGDNTSGQLGDG--TTTDRNTAVP---VSGLDG--VIAIACGVNHSM---------- 388

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                            +  +  + TWG+   GQLG G    +      N        D 
Sbjct: 389 ----------------ALRNDGTVWTWGFNAFGQLGDGTKVSK------NTAVPISGLDG 426

Query: 420 QLEVFCGSGFTYAI 433
            + + CG+  + A+
Sbjct: 427 IIAITCGTSHSMAL 440


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 32/332 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            K+++ G  T+G+LG G L     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 2783 KIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 2836

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L++ 
Sbjct: 2837 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKR--IRDIACGSSHSAAITSSGELYSW 2894

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 2895 GLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2951

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 2952 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3009

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3010 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3069

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +P       V  L+G K+ ++A G+ HS   T
Sbjct: 3070 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3096



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 129/259 (49%), Gaps = 24/259 (9%)

Query: 56  LSPQLLNLSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           L+P L++  SLSS  M+       G H LAL+S      G+VFSWG G  G+LGHG+   
Sbjct: 445 LAPMLIH--SLSSRKMVKLAAHPDGQHYLALSS-----NGEVFSWGCGDGGRLGHGDTTY 497

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              P  +  F+G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     ++P
Sbjct: 498 LEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTP 557

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V++     V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 558 MLVTALKGLKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLV 614

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSF 281
             L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L +      
Sbjct: 615 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 674

Query: 282 SQAALGWNHVLVLTGDGEV 300
              A+G  H L LT DGEV
Sbjct: 675 VDVAVGSTHCLALTDDGEV 693



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 141/317 (44%), Gaps = 48/317 (15%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G++F
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 3918

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3919 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 3978

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G      +P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3979 YGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4035

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL--YTWGRGFNSTSDVNC 271
              S D +R    P+   GL   +++ I+         + +G +  + WG           
Sbjct: 4036 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWG----------- 4081

Query: 272  PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
               LP           W+      G GEV   G +  G L D    +  RP  VA     
Sbjct: 4082 ---LPR----------WS-----LGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVA----- 4118

Query: 332  NLDGVKVIQIAAGAEHS 348
             L G K+ ++A G+ H+
Sbjct: 4119 ALQGKKINRVACGSAHT 4135



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 20/252 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P ++       +   V  +ACG  +  A+T     + 
Sbjct: 478 EVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT-----VD 532

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G +++ 
Sbjct: 533 GELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSW 592

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  V    + ++ ++ CG + S+ L KD    QVY +G G  
Sbjct: 593 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 649

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
            +LG   D    V  P++   L   ++V ++       AL+ +G +++WG       F++
Sbjct: 650 QRLGHGTD--EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDT 707

Query: 266 T-SDVNCPQSLP 276
             S+   P++LP
Sbjct: 708 LFSNKKQPKALP 719



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 141/368 (38%), Gaps = 88/368 (23%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 3852 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 3904

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG LFT G G +G+LGHGD      P  V +     V  +ACG     +L 
Sbjct: 3905 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 3964

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +        P     L  + ++ +      S AL+ 
Sbjct: 3965 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTK 4019

Query: 253  EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
             G +YTWG+G                                  D   L  G   H    
Sbjct: 4020 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4041

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK-----FHWVRLFIISYTP 367
                    RP      +V  L G KVI IA G+ H    T       F W          
Sbjct: 4042 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQW---------- 4080

Query: 368  FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCG 426
              P + + +      + TWG  + GQLG G T     P++V  L  +  NR     V CG
Sbjct: 4081 GLPRWSLGL----GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR-----VACG 4131

Query: 427  SGFTYAIS 434
            S  T + S
Sbjct: 4132 SAHTLSWS 4139



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   +++  +  +    L  ++++G    G+++  A++A+G LY  
Sbjct: 3759 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3814

Query: 260  G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G       G   T  V+ P  L S   +   + A+  G  H L L+ +GEV   G +  G
Sbjct: 3815 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3874

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R    RP       + +L GV+V+ IAAG  HSA +T                 
Sbjct: 3875 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITA---------------- 3913

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                      +  + TWG G +G+LG G++ DQ+ PK+V   D  Q     ++V CGSG
Sbjct: 3914 ----------SGELFTWGKGRYGRLGHGDSEDQLKPKLV---DALQGHRV-IDVACGSG 3958



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 24/173 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G      +P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3971 VWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTK-----SGAVYT 4025

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-------- 147
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G +        
Sbjct: 4026 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGRIKVFQWGLP 4083

Query: 148  ---------FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
                     +T GD   GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4084 RWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 52/332 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3814

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3815 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GEVYSWGEA 3871

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  +E+V I+A G  SA ++A G L+TWG+G     
Sbjct: 3872 EDGKLGHGN---RSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 3928

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +  S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 3929 GHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD 3988

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
                P+     K+ +L G+ VI++  G++ S  +T                         
Sbjct: 3989 GCKTPM-----KIDSLTGLGVIKVECGSQFSVALT------------------------- 4018

Query: 378  AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             ++ A+ TWG G++ +LG G+      P+ V 
Sbjct: 4019 -KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ 4049



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 66/297 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G LG   Y + + P+   S  +  V QI C  +  L+L             SG      
Sbjct: 391 WGLLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLIL-----------SSSG-----A 434

Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFNS 265
           V     +S +L P +   L   ++V ++A  +G    ALS+ G +++WG       G   
Sbjct: 435 VYTQNYKSTTLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD 494

Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           T+ +  P ++ ++ +  QA       A G  +   +T DGE+   G  ++G L       
Sbjct: 495 TTYLEEP-TMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSED 553

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            T P+      V+ L G+KV+ +A G+  +  +                         + 
Sbjct: 554 QTTPM-----LVTALKGLKVVDVACGSGDAQTL------------------------AVT 584

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           EN  + +WG G++G+LG G +     PK+V   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 585 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLV---EKLQDLDI-VKVCCGSQFSVALTK 637



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2728 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 2785

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  +  P+ +   S+    + A+  G  H + LT DG+V   G  
Sbjct: 2786 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 2845

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 2846 DDGKLGHFSRMNCDKP-----RLIEALKAKRIRDIACGSSHSAAITS------------- 2887

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + +WG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 2888 -------------SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRV------IQVA 2928

Query: 425  CGS 427
            CGS
Sbjct: 2929 CGS 2931



 Score = 38.9 bits (89), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 57/290 (19%)

Query: 162 DYRSHS-SPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           +Y+S + +P+ + S  ++ + ++A     +H L L  +    +V+ +G G  G+LG    
Sbjct: 439 NYKSTTLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSN---GEVFSWGCGDGGRLG--HG 493

Query: 219 RIRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD 268
               +  P +    +  +    +V I+     SAA++ +G LYTWGRG        S+ D
Sbjct: 494 DTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSED 553

Query: 269 VNCPQSLPS--SLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
              P  + +   L     A G      L +T +G+V   G   +G L          P  
Sbjct: 554 QTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 613

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V  EK+ +LD   ++++  G++ S  +T                          ++  + 
Sbjct: 614 V--EKLQDLD---IVKVCCGSQFSVALT--------------------------KDGQVY 642

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           TWG G++ +LG G   D+ H +   L D  Q +   ++V  GS    A++
Sbjct: 643 TWGKGDNQRLGHGT--DE-HVRFPKLLDTLQGKKV-VDVAVGSTHCLALT 688


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 154/337 (45%), Gaps = 32/337 (9%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 523 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVP 577

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 578 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 637

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 638 MLVAGLKGLKVIDVACGSGDAQTLAVTDNG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 694

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 695 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 754

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV  T+P   AL     LD   ++ I
Sbjct: 755 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV--TKPEPAAL---PGLDTKHIVGI 809

Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           A G   S   +    W     +       PF +++ A
Sbjct: 810 ACGPAQSFAWSSCSEWSIGLRV-------PFVVDICA 839



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 558 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 612

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+D+G +++ 
Sbjct: 613 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSW 672

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 673 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 729

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 730 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 777



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 471 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 519

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 520 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 575

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 576 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 634

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + +
Sbjct: 635 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTD 665

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 666 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 717


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 166/400 (41%), Gaps = 54/400 (13%)

Query: 21  KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAH 78
           +P I  E    +   ++ WG+   G+LG G + DE  L P+ L+    + +  +ACG  +
Sbjct: 13  EPVIAVEYPLHKKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENY 72

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
            + +T       G+++S G    GQLGH +    L   P        +     + G  H+
Sbjct: 73  TVVITQI-----GEIYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYHT 123

Query: 139 GFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
             +++ G LF+ G  T GQLG +      SSP  V +     V QIACGM+H+  L  + 
Sbjct: 124 LAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNN- 182

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
              ++Y +GS   GQLG+  D    +  P+       I I  I+  G  S A+S  G ++
Sbjct: 183 --GELYSWGSNSEGQLGLGTDTKYEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVF 239

Query: 258 TWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            WG+      G N T D N P  L +  +     AA G    + LT DG V   G   +G
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L      +   P      +V  L G  V QI+ G  H+                     
Sbjct: 300 QLGHGSNSNEILP-----RQVMELMGSTVTQISCGKRHT--------------------- 333

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
               + ++     +  WG G  GQLG  +T     P+VV+
Sbjct: 334 ----LALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVH 369



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG+ ++GQLG G     E+ P+ ++      ++ +ACGG H +A++       G V
Sbjct: 184 ELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISK-----SGAV 238

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  +  D   P  +      +  I + + G   S F++  G +FTCG G
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAK--ICYAACGEEFSVFLTVDGGVFTCGAG 296

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG   +   P +V   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 297 MYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 354

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G      RSV+ PQV  G
Sbjct: 355 G--NHSTRSVTTPQVVHG 370


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 168/387 (43%), Gaps = 54/387 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           ++++ WG  + GQLG G + DE  L+P  +     S+V+ +ACG  H L LT+      G
Sbjct: 1   MELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTA-----SG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           KV++ G     QLGH    +    +P+   +     IT I+ G  HS  +++ G + + G
Sbjct: 56  KVYACGSNDYAQLGH----ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWG 111

Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           D   GQLGH  D      P  V + V+K V QIACG  HSL L   C G ++Y +GS   
Sbjct: 112 DNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLAL--TCCG-ELYAWGSNIY 168

Query: 211 GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           GQLGV +   +   + P +   L  I +  I+  G+ S  +S    ++ WGR      G 
Sbjct: 169 GQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N  ++   P  L +  +L     A G    + LT +G V   G   +G L      +   
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML 288

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P       V  L G  + Q+A G  H+  +                        V A  R
Sbjct: 289 P-----RMVMELMGSTISQVACGNRHTLAM------------------------VPARGR 319

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            I  +G G  GQLG  NT     P++V
Sbjct: 320 -IYGFGLGSSGQLGTRNTKSLNLPQMV 345



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 16/201 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL----SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           ++++WG+   GQLG  +   EL    +P LL       V  +ACGG H   ++  S+V G
Sbjct: 159 ELYAWGSNIYGQLGV-KTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFG 217

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
                WGR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTC
Sbjct: 218 -----WGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTC 270

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +GQLGHG   +   P  V   +   + Q+ACG RH+L ++      ++YGFG G  
Sbjct: 271 GAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVP--ARGRIYGFGLGSS 328

Query: 211 GQLGVSKDRIRSVSLPQVTIG 231
           GQLG      +S++LPQ+ IG
Sbjct: 329 GQLGTRN--TKSLNLPQMVIG 347



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 154/347 (44%), Gaps = 42/347 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           KV++ G+    QLG    H+  S + L +  L    ++ +ACG  H +ALT       G+
Sbjct: 56  KVYACGSNDYAQLG----HELSSKRPLQIPELVDCVITQIACGSRHSMALTE-----WGQ 106

Query: 93  VFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V SWG    GQLGH    D +  PK V        T+  I+ G NHS  ++  G L+  G
Sbjct: 107 VLSWGDNECGQLGHASDQDVVQLPKTVRALVSK--TVVQIACGNNHSLALTCCGELYAWG 164

Query: 152 DGTFGQLG---HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
              +GQLG     +    ++P+ +++ +   V  IACG  HS ++ K    + V+G+G  
Sbjct: 165 SNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISK---SSAVFGWGRN 221

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS 267
             GQLG++ +  R+   P     L  + +  ++   + S  L+ EG ++T G G +    
Sbjct: 222 NCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG 279

Query: 268 DVNC-PQSLPSSL------SFSQAALGWNHVLVLT---------GDGEVLMLGGSHHGML 311
              C  + LP  +      + SQ A G  H L +          G G    LG  +   L
Sbjct: 280 HGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSL 339

Query: 312 SDPERVSS--TRPLSVALEKVSNLDGVKVI-QIAAGAEHSAVVTGKF 355
           + P+ V      P   AL + S+     VI QI +G + S V T  +
Sbjct: 340 NLPQMVIGPWVSPSGSALLQSSDAQIAVVIRQIFSGGDQSIVTTSLY 386



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 61/292 (20%)

Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           L+  G+ + GQLG G        +P K+    +  V+QIACG RH+L L       +VY 
Sbjct: 3   LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTA---SGKVYA 59

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
            GS    QLG      R + +P++     D  I  I+     S AL+  G + +WG    
Sbjct: 60  CGSNDYAQLGHELSSKRPLQIPELV----DCVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 262 ---GFNSTSDV-NCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGML--SD 313
              G  S  DV   P+++ + +S +  Q A G NH L LT  GE+   G + +G L    
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKT 175

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
           P  +        A   ++ L G+ V  IA G  HS            F+IS         
Sbjct: 176 PSELGQCN----APMLLTTLLGIPVRAIACGGNHS------------FLIS--------- 210

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-----------KVVNLGDEF 414
                ++ A+  WG    GQLGL +  ++ +P           + V  GDEF
Sbjct: 211 -----KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 257


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 168/393 (42%), Gaps = 70/393 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGKV 93
           V  WG+ T GQLG G L +E       + S  +V +  +ACG  H L +        G+V
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKK-----DGRV 65

Query: 94  FSWGRGSSGQLGHGE------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
            S G    GQLGH +      ++D+L         G R  +   S+G  HS  ++D+G +
Sbjct: 66  LSCGNNDYGQLGHEKPCKRPALIDSL---------GER-NVLQASSGTKHSTVLTDAGQV 115

Query: 148 FTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           FT G     QLG G  D  S S P  V    +  V Q+ACG  H++ L       Q+Y +
Sbjct: 116 FTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTAT---GQIYTW 172

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----- 260
           GS   GQLG++    ++   PQ    +  + IV ++A  D +  L+  G L+ WG     
Sbjct: 173 GSNNHGQLGLANKTPQNE--PQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFG 230

Query: 261 -RGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
             G     D   P +L  +L        A G +H L LT DG V   G   +G L     
Sbjct: 231 QLGVGDDQDRGAP-TLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTS 289

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
            +   P      KV  L G  V QIA G +HS              I+Y P         
Sbjct: 290 NNELLP-----RKVFELMGSSVTQIACGRKHS--------------IAYVP--------- 321

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
              +  +  +G G +GQLG G+T +++ P +V 
Sbjct: 322 --SSGRVYVFGLGGNGQLGTGSTVNRMSPAMVK 352



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 15/233 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG+  D QLG G++    +  P+++   +   V  +ACG AH + LT+      G+
Sbjct: 114 QVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTA-----TGQ 168

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +++WG  + GQLG         P+ V+   G    I  ++AG +H+  ++ SG LF  G 
Sbjct: 169 IYTWGSNNHGQLGLANKTPQNEPQWVSCISG--LPIVRVAAGADHNLVLTISGALFAWGC 226

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            +FGQLG GD +   +P  V +  N+ +  +ACG  HSL L +D     V+ FG+G  GQ
Sbjct: 227 NSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRD---GGVFTFGAGMYGQ 283

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
           LG   +   +  LP+    L    +  I+     S A + + G +Y +G G N
Sbjct: 284 LG--HNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGN 334



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 90/180 (50%), Gaps = 9/180 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG+   GQLG      +  PQ ++  S   +  +A G  H L LT     I G +F
Sbjct: 168 QIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLT-----ISGALF 222

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S GQLG G+  D   P  V         I  ++ G +HS  ++  G +FT G G 
Sbjct: 223 AWGCNSFGQLGVGDDQDRGAPTLVKTLRNQ--GICALACGDDHSLALTRDGGVFTFGAGM 280

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLGH    +   P KV   +  +V QIACG +HS+  +      +VY FG G  GQLG
Sbjct: 281 YGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPS--SGRVYVFGLGGNGQLG 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 21/300 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V S G    GQLG  +      P L++     +V   + G  H   LT       G+VF
Sbjct: 64  RVLSCGNNDYGQLGHEKPCKR--PALIDSLGERNVLQASSGTKHSTVLTD-----AGQVF 116

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG     QLG G++  A    P        + +  ++ G  H+  ++ +G ++T G   
Sbjct: 117 TWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNN 176

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG  +    + P  VS      + ++A G  H+LVL    +   ++ +G    GQLG
Sbjct: 177 HGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVL---TISGALFAWGCNSFGQLG 233

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
           V  D+ R    P +   L +  I  ++   D S AL+ +G ++T+G G       N++++
Sbjct: 234 VGDDQDRGA--PTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNN 291

Query: 269 VNCPQSLPSSL--SFSQAALGWNH-VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
              P+ +   +  S +Q A G  H +  +   G V + G   +G L     V+   P  V
Sbjct: 292 ELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMV 351



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 35/218 (16%)

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
           L + V  +GS   GQLG+      +V+LP+      ++E+V I+     +  +  +G + 
Sbjct: 7   LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVL 66

Query: 258 TWGRGFNSTSDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           + G           P   P+ +      +  QA+ G  H  VLT  G+V   G +    L
Sbjct: 67  SCGNNDYGQLGHEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQL 126

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
              +  S++  +      V  L   KV+Q+A G+ H+  +T                   
Sbjct: 127 GRGQVDSASTSIP---RMVRGLADHKVVQVACGSAHTVGLTA------------------ 165

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                      I TWG   HGQLGL N   Q  P+ V+
Sbjct: 166 --------TGQIYTWGSNNHGQLGLANKTPQNEPQWVS 195


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 22/303 (7%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            K+++ G GT+G+LG G  ++  +P+     S   V  +A   GG H LALT+      GK
Sbjct: 3110 KLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTA-----DGK 3164

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +    P+ +    G R  +  I+ G  HS  V+  G L+T G 
Sbjct: 3165 VYSWGEGEDGKLGHGNRITLEAPRLIESLAGER--VISIACGSAHSACVTARGHLYTWGL 3222

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LGHGD      P  V +  N  V Q+ACG R +  L     G +V+ +G G  G+
Sbjct: 3223 GEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACG-KVFSWGDGDFGK 3281

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            LG  +      ++P     L+ + +  +      S AL+ +G ++TWG+      G    
Sbjct: 3282 LG--RGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCD 3339

Query: 267  SDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            + V  P +L  +L   +    A+G  H L +T + +V   G + HG   +     + RP 
Sbjct: 3340 AHVRRP-TLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVNRRPA 3398

Query: 324  SVA 326
             VA
Sbjct: 3399 LVA 3401



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P+L+   S   V  +ACGGAH   LT+      G+++
Sbjct: 4058 EVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTA-----RGRIY 4112

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V      R       +G   +  ++D   +++ GDG 
Sbjct: 4113 TWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGD 4172

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+++       V ++ CG + S+ L   C    VY +G G   +LG
Sbjct: 4173 YGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVAL---CQCGSVYTWGKGDYHRLG 4229

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S + +R    P    G+    IV I+       A +  G +YTWG
Sbjct: 4230 HGSYEHVRR---PMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWG 4273



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 127/284 (44%), Gaps = 25/284 (8%)

Query: 58   PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
            P LL       ++ +AC  GG H LAL++      G+V+SWG G  G+LGHG  V    P
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSA-----DGEVYSWGEGEDGKLGHGNRVSYDRP 4081

Query: 116  KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
            K +T   G    +  I+ G  HS  ++  G ++T G G +G+LGHGD      P  V + 
Sbjct: 4082 KLITALSG--LEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEAL 4139

Query: 176  VNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
             +  V  +ACG     +L +  D   + V+ +G G  G+LG  +       LP     L 
Sbjct: 4140 SSFRVIDVACGSGDAQTLCITDD---DNVWSWGDGDYGKLG--RGGSEGCKLPMRIDCLK 4194

Query: 234  DIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAA 285
             + ++ +      S AL   G +YTWG+G        S   V  P  +           A
Sbjct: 4195 GLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIA 4254

Query: 286  LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVALE 328
             G  H +  T  GEV   G +  G L D   +++ RP L +AL+
Sbjct: 4255 TGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQ 4298



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 164/386 (42%), Gaps = 55/386 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            KV+ WG     QLG  +      P     LS+L  V +   GG+  L + S      GK+
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHI--AGGSKTLFIVSHD----GKL 3111

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            F+ G G++G+LG G   +   P+   +          + +G  H+  ++  G +++ G+G
Sbjct: 3112 FACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEG 3171

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHG+  +  +P  + S   + V  IACG  HS  +        +Y +G G+ G+L
Sbjct: 3172 EDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTAR---GHLYTWGLGEYGRL 3228

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW--------GRG 262
            G   D I+ V  P++   L +  ++ + A G R A   AL+A G +++W        GRG
Sbjct: 3229 GHGDDNIQLV--PKMVEALANYRVIQV-ACGSRDAQTLALTACGKVFSWGDGDFGKLGRG 3285

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +    +       +SL  +Q   G    L LT DGEV   G   +  L         RP
Sbjct: 3286 GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRP 3345

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                   V  L G +VI +A GA H   VT                         +EN+ 
Sbjct: 3346 -----TLVEALRGRRVIHVAVGALHCLAVT-------------------------SENQ- 3374

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +  WG  +HGQ G G TC    P +V
Sbjct: 3375 VWAWGDNDHGQQGNGTTCVNRRPALV 3400



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 120/276 (43%), Gaps = 51/276 (18%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WSWG G DG+LG G      +PQ L+  +   V  +A G A    +TS      G +++W
Sbjct: 547 WSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITS-----RGALYTW 601

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG-DGTF 155
           GRG+ G+LGHG + + L P+PV+F   +   I  ++ GW         G    C  +G  
Sbjct: 602 GRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGE-------GSTLCCTWEGAV 654

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
              G G+     +P  +S+     V ++  G  H    L D  G QVY +G G   +LG 
Sbjct: 655 QVFGEGEA---GTPRALSALAMFRVTRVYTG-EHWHAALTD--GGQVYTWGKGDGYRLG- 707

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------------- 260
               + S  +P++   L  I+IV +S       ALS+EG L+ WG               
Sbjct: 708 -HGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNPVPQPV 766

Query: 261 RGFNSTSDVN---------------CPQSLPSSLSF 281
           + FN +   N                P+ LPSSL F
Sbjct: 767 KAFNPSFKANGVSSGPTQIFAWSEENPRDLPSSLPF 802



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 144/361 (39%), Gaps = 58/361 (16%)

Query: 90   GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G  V+ WG    GQLG  E      P P             +  G      V+  G ++ 
Sbjct: 3950 GCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAA--LNPVQLVGGEQTLFAVTPDGKVYA 4007

Query: 150  CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGS 207
             G G  G+LG G   S S P  ++S  +  + ++AC  G +H L L  D    +VY +G 
Sbjct: 4008 TGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSAD---GEVYSWGE 4064

Query: 208  GKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
            G+ G+LG    VS DR      P++   L  +E+V I+  G  SA L+A G +YTWG+  
Sbjct: 4065 GEDGKLGHGNRVSYDR------PKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGR 4118

Query: 262  ----GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                G   + D   P+ + +  SF    +    G    L +T D  V   G   +G L  
Sbjct: 4119 YGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4178

Query: 314  PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISY 365
                    P+     ++  L G++VI++  G++ S  +         GK  + RL   SY
Sbjct: 4179 GGSEGCKLPM-----RIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSY 4233

Query: 366  TPFFPPFFIN------------------VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
                 P  +                      +   + TWG  + GQLG G T     P++
Sbjct: 4234 EHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRL 4293

Query: 408  V 408
            +
Sbjct: 4294 L 4294



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 51/242 (21%)

Query: 199  GNQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHL 256
            G  VYG+G   RGQLG V   ++R+ +       L+ +++VG    G+++  A++ +G +
Sbjct: 3950 GCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVG----GEQTLFAVTPDGKV 4005

Query: 257  YTWGRGFNSTSDVNCPQSL--PSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGS 306
            Y  G G      +    S+  P+ L+  Q           G  H L L+ DGEV   G  
Sbjct: 4006 YATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEG 4065

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    RVS  RP     + ++ L G++V+ IA G  HSA +T +            
Sbjct: 4066 EDGKLGHGNRVSYDRP-----KLITALSGLEVVCIACGGAHSACLTARGR---------- 4110

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 426
                            I TWG G +G+LG G++ DQ+ PK+V     F+     ++V CG
Sbjct: 4111 ----------------IYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFR----VIDVACG 4150

Query: 427  SG 428
            SG
Sbjct: 4151 SG 4152



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 137/333 (41%), Gaps = 41/333 (12%)

Query: 127 TITHISAGWNHSGFVSDSGC--LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
           TIT +S       ++  S C   ++ G G  G+LGHGD  +  +P  +    +  V ++A
Sbjct: 524 TITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVA 583

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIE-IVGISA 242
            G+  S V+        +Y +G G +G+LG     I +   PQ V+   H+IE I+ ++ 
Sbjct: 584 AGLACSAVITSR---GALYTWGRGAQGRLG--HGTIENCLTPQPVSFNAHNIERIIDVAL 638

Query: 243 NGDRSAALSA--EGHLYTWGRGFNSTSDVNCPQSLPSSLSF--SQAALGWNHVLVLTGDG 298
                + L    EG +  +G G   T     P++L +   F  ++   G +    LT  G
Sbjct: 639 GWGEGSTLCCTWEGAVQVFGEGEAGT-----PRALSALAMFRVTRVYTGEHWHAALTDGG 693

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---F 355
           +V   G      L      S+  P     + V  L G+K++ ++ GA H   ++ +   F
Sbjct: 694 QVYTWGKGDGYRLGHGNMESTKIP-----KLVEALQGIKIVDLSLGASHGIALSSEGVLF 748

Query: 356 HW---VRLFIISYTP-----FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
            W    R  I +  P     F P F  N ++       + W E     L ++     P V
Sbjct: 749 VWGTHERTQISNPVPQPVKAFNPSFKANGVSSG-PTQIFAWSEENPRDLPSSL----PFV 803

Query: 408 VNLGDE-FQNRDTQLEVFC-GSGFTYAISRHCL 438
           ++L D  F+  +  L +    SG T      CL
Sbjct: 804 IDLSDNTFKALERLLRIVVEQSGLTNIKDNECL 836



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 48/180 (26%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLL-----NLSSLSSVSM-------LAC---GGAHV- 79
           +++WG G  G+LG G + + L+PQ +     N+  +  V++       L C   G   V 
Sbjct: 598 LYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVF 657

Query: 80  -------------LALTSPSSVI-----------GGKVFSWGRGSSGQLGHGEMVDALYP 115
                        LA+   + V            GG+V++WG+G   +LGHG M     P
Sbjct: 658 GEGEAGTPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIP 717

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
           K V    G +  I  +S G +H   +S  G LF  G     Q+      S+  P  V +F
Sbjct: 718 KLVEALQGIK--IVDLSLGASHGIALSSEGVLFVWGTHERTQI------SNPVPQPVKAF 769



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 32   QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
            Q   V++WG G   +LG G       P  +       +  +A G  H +A T       G
Sbjct: 4213 QCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTD-----TG 4267

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPK 116
            +V++WG    GQLG G  + A  P+
Sbjct: 4268 EVYTWGDNDEGQLGDGTTLAAQRPR 4292


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 33/309 (10%)

Query: 54  DELSPQLLNLSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
           D   PQ   ++ LS ++M+       G H LALT        +V+SWG G  G+LGHG+ 
Sbjct: 500 DTQCPQ--EMTGLSGINMIKIAAHPEGKHYLALTKDY-----EVYSWGNGDGGRLGHGDT 552

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
                P  +    G    I  +  G  +S  +S +G L+T G G +G+LGHG      +P
Sbjct: 553 STKEEPTLIQALKGK--DIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTP 610

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQ 227
             +S+  ++++ ++ACG  ++  L   C+ +Q  VY +G G  G+LG  +       LP+
Sbjct: 611 TMISALSDEHIIKVACGSFYAHTL---CITSQGKVYSWGDGDYGKLG--RGGSDGSKLPR 665

Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSL 279
           +   L +++IV +      S ALS +GH+YTWG+G        +  +V  P+ +      
Sbjct: 666 LIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDR 725

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
                +LG +HVL LT  GEV   G + +  + D   +   +P       +  L G KV+
Sbjct: 726 KVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQP-----RLIEALKGQKVV 780

Query: 340 QIAAGAEHS 348
            +  G   S
Sbjct: 781 GVCCGPAQS 789



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL++ + V     +SWG G  G+LGHG  +    PK +    G  Y I  I+ G
Sbjct: 3965 GGKHCLALSADNDV-----YSWGEGDDGKLGHGNRLACETPKLIEALQG--YEIIDIACG 4017

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G L+T G G +G+LGHGD      P  +   V   V  +ACG     +L 
Sbjct: 4018 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLC 4077

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       +P+    L  + ++ +      S AL+ 
Sbjct: 4078 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR 4132

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        +   V  P+ + +         A G  H +  + +GEV   G
Sbjct: 4133 SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 4192

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP       VS L G K+  +A G+ H+
Sbjct: 4193 DNDEGQLGDDTTNAIQRP-----RLVSALQGKKITNVACGSAHT 4231



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 12/226 (5%)

Query: 36   VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+SWG G DG+LG G RL  E +P+L+       +  +ACGGAH  A+TS      G+++
Sbjct: 3978 VYSWGEGDDGKLGHGNRLACE-TPKLIEALQGYEIIDIACGGAHSAAITS-----TGQLY 4031

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK +    G++       +G   +  ++D   +++ GDG 
Sbjct: 4032 TWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 4091

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L +      VY +G G   +LG
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4148

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                    V  P+    L   +I+ I+       A S EG ++TWG
Sbjct: 4149 HGTG--EHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 4192



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 10/230 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G    +  P L+       +  + CGG +  A+++      G ++
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISA-----NGALY 589

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGRG+ G+LGHG   D L P  ++             + + H+  ++  G +++ GDG 
Sbjct: 590 TWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGD 649

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P  +    N  + Q+ CG + S+ L +D     VY +G G+  +LG
Sbjct: 650 YGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED---GHVYTWGKGEGWKLG 706

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
              +   +V  P++   L D ++VG+S       AL+ +G +Y WG+  N
Sbjct: 707 HPTE--ENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNEN 754



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 174/410 (42%), Gaps = 59/410 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V+ WG     QLG  +    +L  Q   LS L  + +   GG+  L + S      GK+
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHI--AGGSKSLFIVSHE----GKL 2948

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++ G G++G+LG G   +  YP+P+ F   +      + +G  H+  ++  G +F+ G+G
Sbjct: 2949 YACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG 3008

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHG+  +   P  + +  +K +  IACG  HS  +       ++Y +G G+ G+L
Sbjct: 3009 EDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3065

Query: 214  GVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            G   D I  +  P++   L  H I  V   +   ++ AL+ EG +++WG       G   
Sbjct: 3066 G-HGDNITQLK-PKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG 3123

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +   N P ++   ++L   Q   G    L LT  GEV   G   +  L         +P 
Sbjct: 3124 SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPT 3183

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                  + +L   KVI +A GA H   VT                          +   +
Sbjct: 3184 V-----IESLKDKKVIHVAVGALHCLAVT--------------------------DTGQV 3212

Query: 384  MTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
              WG  +HGQ G G T     P +V+ L D   NR     V CGS  + A
Sbjct: 3213 YAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR-----VACGSSHSIA 3257



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 23/256 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
            ++++WG G  G+LG G   D+L P+L+       V  +ACG   A  L +T   +     
Sbjct: 4029 QLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN----- 4083

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LG G       PK +    G    +  +  G   S  ++ SG ++T G 
Sbjct: 4084 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAG--LGVIKVECGSQFSVALTRSGSVYTWGK 4141

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G + +LGHG       P KV++   K +  IA G  H +    +    +V+ +G    GQ
Sbjct: 4142 GDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE---GEVFTWGDNDEGQ 4198

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
            LG   D   ++  P++   L   +I  ++             H   W     S++    P
Sbjct: 4199 LG--DDTTNAIQRPRLVSALQGKKITNVAC---------GSAHTLAWSTNNASSACARLP 4247

Query: 273  QSLPSSLSFSQAALGW 288
               P      Q    W
Sbjct: 4248 PVAPLEYDLLQDIPTW 4263



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 154/388 (39%), Gaps = 66/388 (17%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G ++  
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV--QLVGGEQTLFAVTADGKVYAT 3927

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S   P  + S  +  + +IA   G +H L L  D   N VY +G G
Sbjct: 3928 GYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSAD---NDVYSWGEG 3984

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
              G+LG   +R+ +   P++   L   EI+ I+  G  SAA+++ G LYTWG+G      
Sbjct: 3985 DDGKLG-HGNRL-ACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLG 4042

Query: 263  FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----SDP 314
               + D   P+ +   + +    +    G    L +T D  V   G   +G L    SD 
Sbjct: 4043 HGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4102

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYT 366
             +V          +K+ +L G+ VI++  G++ S  +T        GK  + RL   +  
Sbjct: 4103 CKVP---------KKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGE 4153

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG   T     P++V
Sbjct: 4154 HVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLV 4213

Query: 409  NL--GDEFQNRDTQLEVFCGSGFTYAIS 434
            +   G +  N      V CGS  T A S
Sbjct: 4214 SALQGKKITN------VACGSAHTLAWS 4235



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 31/227 (13%)

Query: 150 CGDGT---FGQLGHGDYRSHSS----PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGN 200
           C D T     Q G   +  +SS    P +++     N+ +IA     +H L L KD    
Sbjct: 478 CSDRTILILTQTGKVFFMYYSSDTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKD---Y 534

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +VY +G+G  G+LG      +    P +   L   +I+ +   G  SAA+SA G LYTWG
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEE--PTLIQALKGKDIIDVECGGTYSAAISANGALYTWG 592

Query: 261 RG------FNSTSDVNCPQSLPSSLS---FSQAALG--WNHVLVLTGDGEVLMLGGSHHG 309
           RG        +  D   P ++ S+LS     + A G  + H L +T  G+V   G   +G
Sbjct: 593 RGNYGRLGHGTAEDCLTP-TMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYG 651

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            L       S  P    +EK+ N   VK++Q+  GA+ S  ++   H
Sbjct: 652 KLGRGGSDGSKLPR--LIEKLQN---VKIVQVYCGAQFSVALSEDGH 693



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 82/221 (37%), Gaps = 48/221 (21%)

Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
           PQ    L ++ I  I  +      L+  G ++        +SD  CPQ +      +   
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----MYYSSDTQCPQEMTGLSGINMIK 517

Query: 286 LGW----NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
           +       H L LT D EV   G    G L   +  +   P       +  L G  +I +
Sbjct: 518 IAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEP-----TLIQALKGKDIIDV 572

Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
             G  +SA ++                           N A+ TWG G +G+LG G   D
Sbjct: 573 ECGGTYSAAISA--------------------------NGALYTWGRGNYGRLGHGTAED 606

Query: 402 QIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 441
            + P +++ L DE       ++V CGS + + +   C+ SQ
Sbjct: 607 CLTPTMISALSDEH-----IIKVACGSFYAHTL---CITSQ 639


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 149/326 (45%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G G  G+LG G     + P LL       V  +A   GG H LAL+S      G 
Sbjct: 4345 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4399

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +  +Y +P    +     I  I+ G +HS  ++ +G L+T G 
Sbjct: 4400 VYSWGEGDDGKLGHGNRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4457

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD     +P  V +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 4458 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4514

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
            G+LG  +       +P     L  + ++ +      S AL+  G +YTWG+G      + 
Sbjct: 4515 GKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4572

Query: 266  TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D V  P+ + +         A G  H +  T  GEV   G +  G L D    +  RP
Sbjct: 4573 TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRP 4632

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4633 -----RLVHALQGKKITRVACGSAHT 4653



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG G  G+LG G    +DE  P+L+      +++ +ACG  +   L+S      G++
Sbjct: 526 VYSWGNGDGGRLGHGDRVWYDE--PKLVEALVDKNITFIACGSTYSAVLSS-----NGEL 578

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG+ G+LGHG   + L P  VT  +GH        +G + +  V+ SG +F+ GDG
Sbjct: 579 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G+  +L
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEGYRL 695

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G   +    +  P+V   L   ++  +        AL+ +  +Y WGR
Sbjct: 696 GHGNE--EHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGR 741



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 169/419 (40%), Gaps = 63/419 (15%)

Query: 28   EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
            E   Q   V+ WG     QLG  +      P     LS L  + +   GG+  L + S  
Sbjct: 3253 EPPPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHI--AGGSKTLFVVSQE 3310

Query: 87   SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
                GK+++ G G++G+LG G+  +   PK + F   +      + +G  H+  ++  G 
Sbjct: 3311 ----GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGK 3366

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            +F+ G+G  G+LGHG+  S   P  + S  +K +  IACG  HS  +       ++Y +G
Sbjct: 3367 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS---SGELYTWG 3423

Query: 207  SGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
             G+ G+LG      +    L Q  +G   I++    A G R A   AL+A+G +Y+WG G
Sbjct: 3424 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQV----ACGSRDAQTMALTADGSVYSWGDG 3479

Query: 263  ----FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                        C   L     + L   Q   G    L LT  GEV   G   +  L   
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3539

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                  +P       V  L G KV+ +A GA H   VT                      
Sbjct: 3540 NDHHVRKP-----TLVEGLRGKKVVHVAVGALHCLAVT---------------------- 3572

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG  +HGQ G G+T     P +V+ L D   NR     V CGS  + A
Sbjct: 3573 ----DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNR-----VSCGSSHSIA 3622



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
            VWSWG G  G+LG G       P  + + SL+ + ++   CG    +ALT       G +
Sbjct: 4506 VWSWGDGDYGKLGRGGSDGCKIP--MKIESLAGLGVIKVECGSQFSVALTR-----SGAI 4558

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG+G   +LGHG       P+ V    G +  I  I+ G  H    +D G +FT GD 
Sbjct: 4559 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK--IISIATGSLHCVACTDKGEVFTWGDN 4616

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
              GQLG G   +   P  V +   K + ++ACG  H+L
Sbjct: 4617 DEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4654



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 149/386 (38%), Gaps = 62/386 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P         R     ++ G      V+  G ++  
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLLAVTADGKVYAT 4349

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S   P  + S  +  V ++A   G +H L L  +     VY +G G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 4406

Query: 209  KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
              G+LG    +  DR      P++   L   EIV I+  G  SAA+++ G LYTWG+   
Sbjct: 4407 DDGKLGHGNRLMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4460

Query: 262  ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               G   + D   P+ + +   +    +    G    L +T D  V   G   +G L   
Sbjct: 4461 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4520

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYT 366
                   P+     K+ +L G+ VI++  G++ S  +T        GK  + RL   +  
Sbjct: 4521 GSDGCKIPM-----KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4575

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG G T     P++V
Sbjct: 4576 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4635

Query: 409  NLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +     Q +     V CGS  T A S
Sbjct: 4636 H---ALQGKKIT-RVACGSAHTLAWS 4657



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 22/196 (11%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  L C    ++ L+     I G V+    GS  Q  + + V     KPVT    H    
Sbjct: 463 IKQLCCTERALMILS-----ISGNVYMMYYGSETQ--YPQRVYGFSEKPVTMIASH---- 511

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
              S G ++     DS  +++ G+G  G+LGHGD   +  P  V + V+KN+  IACG  
Sbjct: 512 ---SDGTHYLALTQDSS-VYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGST 567

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-R 246
           +S VL  +    ++Y +G G  G+LG       +V +P +   L+   +V ++  +GD +
Sbjct: 568 YSAVLSSN---GELYTWGRGNYGRLGHGNS--DNVLIPTLVTALNGHMVVHVACGSGDSQ 622

Query: 247 SAALSAEGHLYTWGRG 262
           +  ++A G +++WG G
Sbjct: 623 TLCVTASGIVFSWGDG 638


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 155/329 (47%), Gaps = 34/329 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG    GQL   +   E+     N    S   V  ++CG  H L L        G +
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLE-----DGTL 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            S G+   GQLG      ++  + ++  +    TI  IS G NHS  VSD G +++ GDG
Sbjct: 56  LSCGQNPYGQLGRKSNNSSI--EQISSLEAQ--TIVDISCGTNHSVAVSDEGSIYSWGDG 111

Query: 154 TFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G+  S + +P K++   N  + QI+CG  HSL L +D    +V+ +G  K GQ
Sbjct: 112 SEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSED---GRVFSWGQNKCGQ 168

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS- 265
           LG+    I   + PQ+   L  I +V ++A G +S ALS  G ++ WG+      GF S 
Sbjct: 169 LGLGSQIINQAT-PQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSD 227

Query: 266 ----TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
               T   +   SL  +L  +  + G  H  VL+ DG V   G   HG L       ++ 
Sbjct: 228 PMKGTFKPHAVNSL-RNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSV 286

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
           P     +K+ +  G +V Q+A G  H+ +
Sbjct: 287 P-----QKIEDYAG-QVSQVACGRYHTLL 309



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 9/175 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G ++ ++ +PQL+       +  +  GG+   AL+     + G V
Sbjct: 157 RVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALS-----MSGTV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG+ ++GQLG          KP          + +IS G  H+  +S  G ++T GD 
Sbjct: 212 FAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDD 271

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           T GQLG       S P K+  +  + V Q+ACG  H+L+ +  C  N++  FG G
Sbjct: 272 THGQLGQNSGNQTSVPQKIEDYAGQ-VSQVACGRYHTLLYVFSC--NRIVSFGKG 323



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 33/116 (28%)

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
           + + G  H L L  DG +L  G + +G L      SS       +E++S+L+   ++ I+
Sbjct: 38  KVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSS-------IEQISSLEAQTIVDIS 90

Query: 343 AGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
            G  HS  V+                          +  +I +WG G  GQLG GN
Sbjct: 91  CGTNHSVAVS--------------------------DEGSIYSWGDGSEGQLGTGN 120


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 177/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   ++S+V  +ACG  H  A+T+      G ++
Sbjct: 263 EVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTCAITA-----SGDLY 317

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  ++G LGHG       PK V+   +G    +  +S G  HS   + SG +FT G
Sbjct: 318 TWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEG--VQVLSVSCGSWHSALTTSSGKVFTFG 375

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHG+  + + P +V +       ++ACG+ HS  +++       + +  +++ 
Sbjct: 376 DGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFT 435

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G+G +  LG                            +GD+ A L              
Sbjct: 436 WGAGDKNPLG----------------------------HGDKDARLVP------------ 455

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C QSL    +F Q A G +  + L+  G V  +G S +G L +P +     P  
Sbjct: 456 -----TCVQSL-IDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNP-KSDGKHPTP 508

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V       L G  V +I+ G+ H AV+T +                            + 
Sbjct: 509 VQ----DRLAGELVEEISCGSCHVAVLTSRSE--------------------------VY 538

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G   D+  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 539 TWGMGANGRLGHGGVEDKKKPTLV---EALKDRHVK-SIACGSNFTTCICIH 586



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 16/190 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WGAG    LG G     L P  +      +   +ACG +  +AL++      G VF
Sbjct: 432 KLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALST-----SGHVF 486

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + G  S+GQLG+ +  D  +P PV     G    +  IS G  H   ++    ++T G G
Sbjct: 487 TMGSSSNGQLGNPKS-DGKHPTPVQDRLAGE--LVEEISCGSCHVAVLTSRSEVYTWGMG 543

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGK 209
             G+LGHG       P  V +  +++V  IACG   +  +   C+   V G      SG 
Sbjct: 544 ANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI---CIHKWVSGADQSVCSGC 600

Query: 210 RGQLGVSKDR 219
           R   G ++ R
Sbjct: 601 RQPFGFTRKR 610



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 124/368 (33%), Gaps = 114/368 (30%)

Query: 91  GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
           G V+ WG          GS+  L      D L PKP+      D     +  I+ G+ H 
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLC--SKADILIPKPLESDVVLD-----VQQIACGYRHI 255

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
              +  G +F  G+   G+LGHG     S P  V +    NV  +ACG  H+        
Sbjct: 256 ALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHT-------- 307

Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
                                                    I+A+GD          LYT
Sbjct: 308 ---------------------------------------CAITASGD----------LYT 318

Query: 259 WGRGFNSTS----DVNCPQSLPSSLS--------FSQAALGWNHVLVLTGDGEVLMLGGS 306
           WG G+ +             LP  +S         S +   W+  L  T  G+V   G  
Sbjct: 319 WGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALT-TSSGKVFTFGDG 377

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             G L    R +   P     ++V  L G + I++A G  HSA +    +   + +IS  
Sbjct: 378 TFGALGHGNRHTVAYP-----KEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVIS-- 430

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 426
                         R + TWG G+   LG G+   ++ P  V    ++       +V CG
Sbjct: 431 --------------RKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFH----QVACG 472

Query: 427 SGFTYAIS 434
              T A+S
Sbjct: 473 HSMTIALS 480


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 170/411 (41%), Gaps = 53/411 (12%)

Query: 11  KGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS 70
           K  +A ++N      E+E E++V   WS G  + G+LG G      S + +       + 
Sbjct: 353 KPPNAFVSNDTTIFHEDEGEREV---WSCGQNSYGELGHGDTASRKSFERIQALQQKEII 409

Query: 71  MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
            +  G  H + LT+      GKVF+ G   +GQ G G      +   +   D    +  H
Sbjct: 410 QIGAGNEHTVVLTA-----DGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGS-SQAH 463

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
              G  H+  VS  G + TCG    GQLGHG+  S S P  + S  NK V  ++C   H+
Sbjct: 464 AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 523

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           ++  +D     +Y FG    GQLG +    R +  PQ    L D +IV ++     +  +
Sbjct: 524 VLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTMVV 581

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
           +  G  + +G+      G ++  +   P  +   L   +      G+ H + L     + 
Sbjct: 582 TVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLF 641

Query: 302 MLGGSHHGMLS-DPERVSSTRPLSVALEKVSN------LDGVKVIQIAAGAEHSAVVTGK 354
             G + +G L       SST  L +  ++ SN      L+G  +++IA G  H+  V   
Sbjct: 642 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV--- 698

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                                  ++N  +  +G   HGQLG G+T ++++P
Sbjct: 699 -----------------------SDNGVMYVFGRNNHGQLGTGDTTERVYP 726



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 32/204 (15%)

Query: 17  INNAKPKIEEEEEEQQVV----------------KVWSWGAGTDGQLGTGRLHDELSP-Q 59
           I+   P+  E   +QQ+V                K +++G    GQLG   + ++L+P Q
Sbjct: 552 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQ 611

Query: 60  LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG----------EM 109
           +           + CG  H +AL S     G  +F++GR   GQLG G          ++
Sbjct: 612 VRGGLERQECLEIRCGYYHTIALCS-----GAHLFAFGRNDYGQLGLGRSNASSTSNLQL 666

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
               +       +     I  I+ G  H+  VSD+G ++  G    GQLG GD      P
Sbjct: 667 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP 726

Query: 170 VKVSSFVNKNVHQIACGMRHSLVL 193
             +  FV K +  +A G  H++VL
Sbjct: 727 FPIDDFVGKRIALVAAGFYHTVVL 750



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 137/333 (41%), Gaps = 66/333 (19%)

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
           KP   F  +  TI H   G            +++CG  ++G+LGHGD  S  S  ++ + 
Sbjct: 353 KPPNAFVSNDTTIFHEDEGERE---------VWSCGQNSYGELGHGDTASRKSFERIQAL 403

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVS-LPQVTIGLH 233
             K + QI  G  H++VL  D    +V+  G    GQ G     R+  +S +P++  G  
Sbjct: 404 QQKEIIQIGAGNEHTVVLTAD---GKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSS 460

Query: 234 DIEIVGISANG-DRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPS--SLSFSQ 283
                  + NG + +  +S +G + T G  +       N+TS+ + P+ + S  +     
Sbjct: 461 QAH----AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSE-SVPKIIRSLENKIVRL 515

Query: 284 AALGWNHVLVLTGDGEVLML---GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
            +  + H ++   DG +  L   G + +G L   + +    P     + V  L   +++ 
Sbjct: 516 VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIP-----QFVEALSDQQIVS 570

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
           +A G  H+ VVT          +S   F                 +G  ++GQLG+    
Sbjct: 571 VACGQYHTMVVT----------VSGKAF----------------AFGKNDYGQLGIDTME 604

Query: 401 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           +Q+ P  V  G E   R   LE+ CG   T A+
Sbjct: 605 NQLAPVQVRGGLE---RQECLEIRCGYYHTIAL 634


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 12/194 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WG   DGQLG GR+    S P+++ NLS +  V + A G AH +AL+     + G 
Sbjct: 167 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 220

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWGR   GQLG G   +   P  +   D  +  +  ++ G  H+  ++ SG +FT GD
Sbjct: 221 VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQK--VEFLACGGCHTALLTKSGLVFTFGD 278

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH   ++   P  V+  V   V QIACG +H+L  + D    +V+ FGSGK GQ
Sbjct: 279 GKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT--GKVFSFGSGKEGQ 336

Query: 213 LGVSKDRIRSVSLP 226
           LG    R + +  P
Sbjct: 337 LGNGGTRNQLIPRP 350



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 42/237 (17%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           KN+ QI CG  HSL L K   G +++ +G    GQLGV +    S S P++   L  + +
Sbjct: 147 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 202

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
           V ISA    S ALS  G++Y+WGR      G   T +   P  + +         A G  
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 262

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H  +LT  G V   G   +G L      +  RP       V+ L G +V QIA G +H+ 
Sbjct: 263 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRP-----RLVTGLVGNRVTQIACGRQHT- 316

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
                                   +  +++   + ++G G+ GQLG G T +Q+ P+
Sbjct: 317 ------------------------LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 349



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 67/266 (25%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +H +  G  H LVL  D           GK  +   S +  R   +      L +  I+
Sbjct: 108 KIHSMDQGEEHMLVLSSD-----------GKPFEYKYSIEHARFQCI------LQEKNII 150

Query: 239 GISANGDRSAALSAEGHLYTW----------GRGFNSTSDVNCPQSLPSSLSFSQAALGW 288
            I+     S ALS  G L+ W          GR F STS     ++L S +   Q + G 
Sbjct: 151 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL-SGVPLVQISAGE 209

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            H + L+  G V   G +  G L      +   P       +  LD  KV  +A G  H+
Sbjct: 210 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSC-----IEALDDQKVEFLACGGCHT 264

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A++T                          ++  + T+G G++GQLG  +T +++ P++V
Sbjct: 265 ALLT--------------------------KSGLVFTFGDGKYGQLGHNSTQNELRPRLV 298

Query: 409 N--LGDEFQNRDTQLEVFCGSGFTYA 432
              +G    NR TQ+   CG   T A
Sbjct: 299 TGLVG----NRVTQIA--CGRQHTLA 318


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 12/194 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WG   DGQLG GR+    S P+++ NLS +  V + A G AH +AL+     + G 
Sbjct: 172 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 225

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWGR   GQLG G   +   P  +   D  +  +  ++ G  H+  ++ SG +FT GD
Sbjct: 226 VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQK--VEFLACGGCHTALLTKSGLVFTFGD 283

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH   ++   P  V+  V   V QIACG +H+L  + D    +V+ FGSGK GQ
Sbjct: 284 GKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT--GKVFSFGSGKEGQ 341

Query: 213 LGVSKDRIRSVSLP 226
           LG    R + +  P
Sbjct: 342 LGNGGTRNQLIPRP 355



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 42/237 (17%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           KN+ QI CG  HSL L K   G +++ +G    GQLGV +    S S P++   L  + +
Sbjct: 152 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 207

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
           V ISA    S ALS  G++Y+WGR      G   T +   P  + +         A G  
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 267

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H  +LT  G V   G   +G L      +  RP       V+ L G +V QIA G +H+ 
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRP-----RLVTGLVGNRVTQIACGRQHT- 321

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
                                   +  +++   + ++G G+ GQLG G T +Q+ P+
Sbjct: 322 ------------------------LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 354



 Score = 44.7 bits (104), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 67/266 (25%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +H +  G  H LVL  D           GK  +   S +  R   +      L +  I+
Sbjct: 113 KIHSMDQGEEHMLVLSSD-----------GKPFEYKYSIEHARFQCI------LQEKNII 155

Query: 239 GISANGDRSAALSAEGHLYTW----------GRGFNSTSDVNCPQSLPSSLSFSQAALGW 288
            I+     S ALS  G L+ W          GR F STS     ++L S +   Q + G 
Sbjct: 156 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL-SGVPLVQISAGE 214

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            H + L+  G V   G +  G L      +   P       +  LD  KV  +A G  H+
Sbjct: 215 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSC-----IEALDDQKVEFLACGGCHT 269

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A++T                          ++  + T+G G++GQLG  +T +++ P++V
Sbjct: 270 ALLT--------------------------KSGLVFTFGDGKYGQLGHNSTQNELRPRLV 303

Query: 409 N--LGDEFQNRDTQLEVFCGSGFTYA 432
              +G    NR TQ+   CG   T A
Sbjct: 304 TGLVG----NRVTQIA--CGRQHTLA 323


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 149/326 (45%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G G  G+LG G     + P LL       V  +A   GG H LAL+S      G 
Sbjct: 4312 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4366

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +  +Y +P    +     I  I+ G +HS  ++ +G L+T G 
Sbjct: 4367 VYSWGEGDDGKLGHGNRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4424

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD     +P  V +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 4425 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4481

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
            G+LG  +       +P     L  + ++ +      S AL+  G +YTWG+G      + 
Sbjct: 4482 GKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4539

Query: 266  TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D V  P+ + +         A G  H +  T  GEV   G +  G L D    +  RP
Sbjct: 4540 TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRP 4599

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4600 -----RLVHALQGKKITRVACGSAHT 4620



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG G  G+LG G    +DE  P+L+      +++ +ACG  +   L+S      G++
Sbjct: 518 VYSWGNGDGGRLGHGDRVWYDE--PKLVEALVDKNITFIACGSTYSAVLSS-----NGEL 570

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG+ G+LGHG   + L P  VT  +GH        +G + +  V+ SG +F+ GDG
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 630

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G+  +L
Sbjct: 631 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEGYRL 687

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G   +    +  P+V   L   ++  +        AL+ +  +Y WGR
Sbjct: 688 GHGNE--EHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGR 733



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 169/419 (40%), Gaps = 63/419 (15%)

Query: 28   EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
            E   Q   V+ WG     QLG  +      P     LS L  + +   GG+  L + S  
Sbjct: 3248 EPPPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHI--AGGSKTLFVVSQE 3305

Query: 87   SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
                GK+++ G G++G+LG G+  +   PK + F   +      + +G  H+  ++  G 
Sbjct: 3306 ----GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGK 3361

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            +F+ G+G  G+LGHG+  S   P  + S  +K +  IACG  HS  +       ++Y +G
Sbjct: 3362 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS---SGELYTWG 3418

Query: 207  SGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
             G+ G+LG      +    L Q  +G   I++    A G R A   AL+A+G +Y+WG G
Sbjct: 3419 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQV----ACGSRDAQTMALTADGSVYSWGDG 3474

Query: 263  ----FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                        C   L     + L   Q   G    L LT  GEV   G   +  L   
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3534

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                  +P       V  L G KV+ +A GA H   VT                      
Sbjct: 3535 NDHHVRKP-----TLVEGLRGKKVVHVAVGALHCLAVT---------------------- 3567

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG  +HGQ G G+T     P +V+ L D   NR     V CGS  + A
Sbjct: 3568 ----DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNR-----VSCGSSHSIA 3617



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
            VWSWG G  G+LG G       P  + + SL+ + ++   CG    +ALT       G +
Sbjct: 4473 VWSWGDGDYGKLGRGGSDGCKIP--MKIESLAGLGVIKVECGSQFSVALTR-----SGAI 4525

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG+G   +LGHG       P+ V    G +  I  I+ G  H    +D G +FT GD 
Sbjct: 4526 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK--IISIATGSLHCVACTDKGEVFTWGDN 4583

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
              GQLG G   +   P  V +   K + ++ACG  H+L
Sbjct: 4584 DEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4621



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 149/386 (38%), Gaps = 62/386 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P         R     ++ G      V+  G ++  
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLLAVTADGKVYAT 4316

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S   P  + S  +  V ++A   G +H L L  +     VY +G G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 4373

Query: 209  KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
              G+LG    +  DR      P++   L   EIV I+  G  SAA+++ G LYTWG+   
Sbjct: 4374 DDGKLGHGNRLMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4427

Query: 262  ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               G   + D   P+ + +   +    +    G    L +T D  V   G   +G L   
Sbjct: 4428 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4487

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYT 366
                   P+     K+ +L G+ VI++  G++ S  +T        GK  + RL   +  
Sbjct: 4488 GSDGCKIPM-----KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4542

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG G T     P++V
Sbjct: 4543 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4602

Query: 409  NLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +     Q +     V CGS  T A S
Sbjct: 4603 H---ALQGKKIT-RVACGSAHTLAWS 4624



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 22/196 (11%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  L C    ++ L+     I G V+    GS  Q  + + V     KPVT    H    
Sbjct: 455 IKQLCCTERALMILS-----ISGNVYMMYYGSETQ--YPQRVYGFSEKPVTMIASH---- 503

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
              S G ++     DS  +++ G+G  G+LGHGD   +  P  V + V+KN+  IACG  
Sbjct: 504 ---SDGTHYLALTQDSS-VYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGST 559

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDR 246
           +S VL  +    ++Y +G G  G+LG       +V +P +   L  H +  V   +   +
Sbjct: 560 YSAVLSSN---GELYTWGRGNYGRLGHGNS--DNVLIPTLVTALNGHMVVYVACGSGDSQ 614

Query: 247 SAALSAEGHLYTWGRG 262
           +  ++A G +++WG G
Sbjct: 615 TLCVTASGIVFSWGDG 630


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 184/407 (45%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H  AL S      G+++SWG  S G+LGHG   D  
Sbjct: 300 DCLVPKPLEFAVRLDVQNISCGGKHA-ALVSKQ----GEIYSWGEESGGRLGHGVDCDVA 354

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P K
Sbjct: 355 HPKLIDALT--HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKK 412

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           +   +   +V  I+CG  H++++       Q++ FG G  G LG   DR  S+S+P+   
Sbjct: 413 LHGPLEGIHVSSISCGPFHTVIVTS---AGQLFTFGDGSFGVLG-HGDR-ESLSVPKEVE 467

Query: 231 GL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS--L 275
            L             H   +V + A G+ S++  + G ++TWG G          +S  +
Sbjct: 468 SLKGLRTVRAACGVWHTAAVVEVMA-GNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV 526

Query: 276 PSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P+ ++      F Q A G    + LT  G V  +G + +G L +P+      P  V  + 
Sbjct: 527 PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGMLPARVEGKL 585

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
             N     V +I+ GA H AV+T +                            + TWG G
Sbjct: 586 HKNF----VEEISCGAYHVAVLTSRTE--------------------------VYTWGKG 615

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG GNT D+  P +V    + Q R+    V CG+ FT AI  H
Sbjct: 616 ANGRLGHGNTDDKNTPTLVEALKDKQVRN----VVCGTNFTAAICIH 658



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 333 EIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVT-----LSGDLY 387

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  +    PK +    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 388 TWGDGTFKFGLLGHGNDISHWVPKKLHGPLEG--IHVSSISCGPFHTVIVTSAGQLFTFG 445

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD  S S P +V S       + ACG+ H+  +++   GN         ++
Sbjct: 446 DGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKI 505

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT G  
Sbjct: 506 FTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSA 563

Query: 263 F-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                 N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 564 VYGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 620



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 11/154 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      +   +ACG    +ALT+      G V+
Sbjct: 504 KIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 558

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 559 TMGSAVYGQLGNPQ-ADGMLPARV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 614

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           G  G+LGHG+    ++P  V +  +K V  + CG
Sbjct: 615 GANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCG 648


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 182/431 (42%), Gaps = 79/431 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG G  GQLG    +++ SPQ +   S  ++  +    +  +AL+       GKV++
Sbjct: 45  VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQD-----GKVYT 99

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+   G LGH ++      +P          I  IS G  H   +S  G L+T G+   
Sbjct: 100 WGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDH 159

Query: 156 GQLGHG-----------------DYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           G+LGH                  DY   S  P KV S       Q++CG + ++VL ++ 
Sbjct: 160 GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTEN- 218

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
              +VY FG+  +GQLG   +   +   P+    L +  I+ I      SAA+S+ G +Y
Sbjct: 219 --GEVYSFGNSMKGQLGYQSEETGNFQ-PKKIPDLQN--IINIDCGQQFSAAVSSSGKVY 273

Query: 258 TWGRGFNST--SDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           TWG   +    ++ +  Q+ P+ ++          + G N +  L+ +G++   G  + G
Sbjct: 274 TWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDG 333

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L    R     P  +  ++       K+I++  G  H+A +T                 
Sbjct: 334 QLGHSNRNDLYAPKQIEFKE-------KIIKVDCGGTHTAFLT----------------- 369

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCD-----QIHPKVVNLGDEFQNRDTQLEVF 424
                    +N  +  +G G  GQLG+G   +     +  PK+V    EF  +   ++V 
Sbjct: 370 ---------QNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIV----EFFKKMKVVDVT 416

Query: 425 CGSGFTYAISR 435
           CG  +T AI+ 
Sbjct: 417 CGGEYTLAITE 427



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 152/345 (44%), Gaps = 41/345 (11%)

Query: 35  KVWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           KV++WG    G LG   +   + + P+L+       +  ++CG  H+ A++       G+
Sbjct: 96  KVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQD-----GE 150

Query: 93  VFSWGRGSSGQLGH--------------GEMVD----ALYPKPVTFFDGHRYTITHISAG 134
           +++WG    G+LGH               +  D    ++ P  V   +G +     +S G
Sbjct: 151 LYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIK--CKQVSCG 208

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVL 193
              +  ++++G +++ G+   GQLG+    + +  P K+     +N+  I CG + S  +
Sbjct: 209 GQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL--QNIINIDCGQQFSAAV 266

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                  +VY +G+   GQLG ++   +  + P    G    +I+ IS   +  AALS E
Sbjct: 267 ---SSSGKVYTWGNNDHGQLGNNQSIYQ--ARPNQVTGFGGNKIINISCGDNFIAALSNE 321

Query: 254 GHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           G L+TWG G +      + +D+  P+ +       +   G  H   LT + ++ + G  +
Sbjct: 322 GKLFTWGYGNDGQLGHSNRNDLYAPKQIEFKEKIIKVDCGGTHTAFLTQNNQLYLFGRGN 381

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            G L   E + S   +    + V     +KV+ +  G E++  +T
Sbjct: 382 EGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAIT 426


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 155/376 (41%), Gaps = 59/376 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG+   GQLG G  +D   P  + +  L  V  +A   +  LAL        G VF+
Sbjct: 280 VWTWGSNASGQLGDGTWNDRAVP--MQVPGLERVKAVASMDSDSLALLDT-----GAVFA 332

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   SGQLG G+  D   P PV   +     +  +  G  H+  +   G L+  G G  
Sbjct: 333 WGANGSGQLGDGDTTDRATPGPVPGLN----AVASVVGGAQHALVLRKDGTLWAWGGGLS 388

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLGHG    H  P  V       V  +A G  HSL  L D     V+ +G    GQLG 
Sbjct: 389 GQLGHGGSERHVVPAPVMRLA--GVTSMATGSFHSLAALGD---GSVWAWGRNTYGQLGD 443

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                R  ++     GL  +  V  +A+   S A+  +G ++ WGR      G  +T D 
Sbjct: 444 GSTAERHAAVR--VEGLGGVRSVASAAH--HSLAVGMDGTVWAWGRNAAGQLGDGTTLDR 499

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P ++P   S +  A G +HVL L  DG V   G +  G L D   V    P+     +
Sbjct: 500 ARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPV-----R 554

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           VS L    V+ +AAG+                          +F   +  +  + TWG G
Sbjct: 555 VSGLG--AVVAVAAGS--------------------------YFSMALQSDGTVWTWGEG 586

Query: 390 EHGQLGLGNTCDQIHP 405
             GQLG G    ++ P
Sbjct: 587 FEGQLGDGGGVQRLSP 602



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 169/409 (41%), Gaps = 54/409 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WGA   GQLG G     ++P L+    L  V  LA GG   +AL +      G V+S
Sbjct: 830  VWAWGANARGQLGDGTTTPRVTPGLVE--GLRGVVALAAGGDASVALRAD-----GSVWS 882

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  +SGQLG G + D   P  V     H      ++ G  H+  V + G L+  G    
Sbjct: 883  WGGNASGQLGDGTLTDRALPAHVE----HLSNAVAVAVGETHALAVGEDGALWAWGANGS 938

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G      +PV+V     + V  +A G   S+ +  D      + +G+   GQLG 
Sbjct: 939  GQLGDGGTAPSLTPVRVKGL--ERVASVAAGRAFSVAVRDD---GTAWAWGTNPSGQLGD 993

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
              +  RSV  P     L  I    +SA      ALSA+G ++TWG       G  S+S  
Sbjct: 994  GTNHARSV--PNQVTSLKGIRA--MSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPT 1049

Query: 270  NC-PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
               P+ +P        A G    + +  DG     G + +G L D +      P++V +E
Sbjct: 1050 GMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIE 1109

Query: 329  KVSNLDGVKVIQIAAGAEHSAV--------VTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
                   V+ ++  A  +H+ V          G   + +L   + T    P  +  +A  
Sbjct: 1110 GPKIRPPVRTVR--AWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASV 1167

Query: 381  RAIMT--------------WGWGEH--GQLGLGNTCDQIHP-KVVNLGD 412
             A+ +              W WG +  GQLG G +  +  P +V  LGD
Sbjct: 1168 VAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLGD 1216



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 156/385 (40%), Gaps = 69/385 (17%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G   D L+P  + +S L +V  +A G    +AL S      G V+
Sbjct: 529 SVWAWGYNALGQLGDGTTVDRLTP--VRVSGLGAVVAVAAGSYFSMALQSD-----GTVW 581

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  GQLG G  V  L P  V         IT ++AG  H+  V   G ++  GD  
Sbjct: 582 TWGEGFEGQLGDGGGVQRLSPVRVEGL----ANITRVAAGSAHALAVRGDGTVWAWGDNG 637

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
            GQLG G +     PV+V     + +  ++ G  HS+ L  D     V  +G    GQL 
Sbjct: 638 EGQLGDGSWADRFRPVQVPGL--QGITAVSGGRSHSMALQGD---GTVRAWGYNGYGQLG 692

Query: 214 -GVSKDRIRSVSLPQVT--IGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G    R+R   +P +T    LH   +           AL A+G L  WG       G  
Sbjct: 693 DGTLTSRVRPALIPGLTGIQALHPSHL--------HVLALHADGTLRGWGYNRFGQLGLG 744

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           +      P  +       + ++G  H L++  DG V+  G +  G L D      T P+S
Sbjct: 745 AAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVS 804

Query: 325 VALEKVSNLDGVKVIQ-IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
           V         GV  ++ +A+G +HS                            +A +  +
Sbjct: 805 VP--------GVPCVRSVASGIQHSL--------------------------ALACDGTV 830

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVV 408
             WG    GQLG G T  ++ P +V
Sbjct: 831 WAWGANARGQLGDGTTTPRVTPGLV 855



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 168/428 (39%), Gaps = 63/428 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG G +GQLG G     LSP  + +  L++++ +A G AH LA+        G V++
Sbjct: 580 VWTWGEGFEGQLGDGGGVQRLSP--VRVEGLANITRVAAGSAHALAVRGD-----GTVWA 632

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G   D   P  V    G    IT +S G +HS  +   G +   G   +
Sbjct: 633 WGDNGEGQLGDGSWADRFRPVQVPGLQG----ITAVSGGRSHSMALQGDGTVRAWGYNGY 688

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S   P  +       +  +     H L L  D     + G+G  + GQLG+
Sbjct: 689 GQLGDGTLTSRVRPALIPGLTG--IQALHPSHLHVLALHAD---GTLRGWGYNRFGQLGL 743

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                 +V +    IG  D   VG +     +  + A+G +  WG       G  +++  
Sbjct: 744 GAAGWSAVPVQVRGIGRVDRLSVGRA----HTLMVRADGTVMAWGENGSGQLGDGTSTHR 799

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P S+P        A G  H L L  DG V   G +  G L D     +T P  V    
Sbjct: 800 TGPVSVPGVPCVRSVASGIQHSLALACDGTVWAWGANARGQLGD----GTTTP-RVTPGL 854

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGK---FHWV-----RLFIISYTPFFPPFFIN------ 375
           V  L GV  + +AAG + S  +      + W      +L   + T    P  +       
Sbjct: 855 VEGLRGV--VALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDRALPAHVEHLSNAV 912

Query: 376 ----------VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 425
                      + E+ A+  WG    GQLG G T   + P  V      +  +    V  
Sbjct: 913 AVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRV------KGLERVASVAA 966

Query: 426 GSGFTYAI 433
           G  F+ A+
Sbjct: 967 GRAFSVAV 974



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 175/422 (41%), Gaps = 54/422 (12%)

Query: 38   SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
            +WG    GQLG G L   + P L+    L+ +  L     HVLAL +  ++ G     WG
Sbjct: 682  AWGYNGYGQLGDGTLTSRVRPALI--PGLTGIQALHPSHLHVLALHADGTLRG-----WG 734

Query: 98   RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
                GQLG G    +  P  V         +  +S G  H+  V   G +   G+   GQ
Sbjct: 735  YNRFGQLGLGAAGWSAVPVQVRGIG----RVDRLSVGRAHTLMVRADGTVMAWGENGSGQ 790

Query: 158  LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
            LG G     + PV V       V  +A G++HSL L  D     V+ +G+  RGQLG   
Sbjct: 791  LGDGTSTHRTGPVSVPGV--PCVRSVASGIQHSLALACD---GTVWAWGANARGQLG--- 842

Query: 218  DRIRSVSLPQVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                  + P+VT GL +    +V ++A GD S AL A+G +++WG       G  + +D 
Sbjct: 843  ---DGTTTPRVTPGLVEGLRGVVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDR 899

Query: 270  NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALE 328
              P  +    +    A+G  H L +  DG +   G +  G L D     S  P+ V  LE
Sbjct: 900  ALPAHVEHLSNAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLE 959

Query: 329  KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI----- 383
            +V+++   +   +A   + +A   G     +L   +      P  +  +   RA+     
Sbjct: 960  RVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKGIRAMSAGAH 1019

Query: 384  ---------MTWGWGE--HGQLGLGNTCDQ-IHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                       W WG+   GQLG G++    + P+ V    E +  +    V  G  FT 
Sbjct: 1020 HVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQV---PELRGVEA---VAAGEQFTV 1073

Query: 432  AI 433
            A+
Sbjct: 1074 AV 1075



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 182/442 (41%), Gaps = 79/442 (17%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLL---NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
            VW+WG  T GQLG G      SP  +    +  L  V  +A G    +A+     ++ G 
Sbjct: 1030 VWTWGDNTLGQLGDG----SSSPTGMWPRQVPELRGVEAVAAGEQFTVAV-----LLDGT 1080

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH-RYTITHISAGWNHSGFVSDSGCLFTCG 151
              +WG    GQLG G+    L P  V       R  +  + A   H+      G + T G
Sbjct: 1081 ARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWG 1140

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            D TFGQLG G     + P+ V    +  V  ++ G  HSL LL D     V+ +G+   G
Sbjct: 1141 DNTFGQLGDGTTTRRAVPLTVYGLAS--VVAVSSGAWHSLALLSD---GTVWAWGANGFG 1195

Query: 212  QLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSD 268
            QLG   S  R R V +     GL D+  V I + G  + A+ ++G ++TWG   F    D
Sbjct: 1196 QLGDGTSTPRTRPVQV----AGLGDV--VAIGSGGYHALAVCSDGSVWTWGYNAFGQLGD 1249

Query: 269  VNC-PQSLPSSLSFSQ---AALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                 +SLP+ +   +   A  G +H  L L  DG +   G +  G L D     +TR  
Sbjct: 1250 GTAESRSLPTRVEGLEGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGD--GTGTTR-- 1305

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHW--------------VRLFIISYT 366
                 +V+      V+ + AGA H+  + G    + W               R+ ++   
Sbjct: 1306 ---YSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLV--- 1359

Query: 367  PFFPPFFINV------------IAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDE 413
            P   P   +V            +A    + TWG   HGQLGLG+  ++  P +V  L D 
Sbjct: 1360 PRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRVRELSDV 1419

Query: 414  FQNRDTQLEVFCGSGFTYAISR 435
                     V  G+ F+ A+ R
Sbjct: 1420 -------TVVSGGADFSLAMKR 1434



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 147/381 (38%), Gaps = 61/381 (16%)

Query: 38   SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
            +WG  T GQLG G       P  L +  L+SV  ++ G  H LAL S      G V++WG
Sbjct: 1138 TWGDNTFGQLGDGTTTRRAVP--LTVYGLASVVAVSSGAWHSLALLSD-----GTVWAWG 1190

Query: 98   RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
                GQLG G       P  V         +  I +G  H+  V   G ++T G   FGQ
Sbjct: 1191 ANGFGQLGDGTSTPRTRPVQVAGLG----DVVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246

Query: 158  LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
            LG G   S S P +V     + V  +A G  +SL L  D     +  +G+   GQLG   
Sbjct: 1247 LGDGTAESRSLPTRVEGL--EGVVAVAGGDHYSLALHSD---GTLSAWGNNASGQLGDGT 1301

Query: 218  DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDV 269
               R   +    +        G +     + AL  +G ++TWG         G + T   
Sbjct: 1302 GTTRYSRVAVKGVDGVVDVRAGAT----HTVALRGDGTVWTWGDNAFGQLGDGASGTRMR 1357

Query: 270  NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
              P+ +P+  S S    G  H   +   G V   G + HG L   +  + T PL     +
Sbjct: 1358 LVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPL-----R 1412

Query: 330  VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
            V  L  V V+  + GA+                          F   +  +  +++WG  
Sbjct: 1413 VRELSDVTVV--SGGAD--------------------------FSLAMKRDGTVLSWGSS 1444

Query: 390  EHGQLGLGNTCDQIHPKVVNL 410
             +G LGLG T  +  P  V L
Sbjct: 1445 LYGSLGLGATGHRSSPGQVAL 1465



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 164/427 (38%), Gaps = 95/427 (22%)

Query: 56  LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
           L+P  + L++L ++  +  G AH LAL +      G V++WG  SSGQLG G   D   P
Sbjct: 100 LAP--VRLAALENIVSVVSGDAHSLALGAD-----GSVWTWGGNSSGQLGDGTTTDRATP 152

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG------------------------ 151
             V   D    ++  ++AG  HS  + + G ++  G                        
Sbjct: 153 MRVAGLD----SVVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGL 208

Query: 152 ------------------DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
                             DGT         GQLG G      SPVKVS      + ++  
Sbjct: 209 NGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSEL--SGITEVRA 266

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
           G  H+L L KD     V+ +GS   GQLG      R+V  P    GL  ++ V  S + D
Sbjct: 267 GTYHALALGKD---GGVWTWGSNASGQLGDGTWNDRAV--PMQVPGLERVKAV-ASMDSD 320

Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
            S AL   G ++ WG       G   T+D   P  +P   + +    G  H LVL  DG 
Sbjct: 321 -SLALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKDGT 379

Query: 300 VLMLGGSHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           +   GG   G L     ER     P+ + L  V+++       +AA  + S    G+  +
Sbjct: 380 LWAWGGGLSGQLGHGGSERHVVPAPV-MRLAGVTSMATGSFHSLAALGDGSVWAWGRNTY 438

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMT--------------WGWGEH--GQLGLGNTCD 401
            +L   S         +  +   R++ +              W WG +  GQLG G T D
Sbjct: 439 GQLGDGSTAERHAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLD 498

Query: 402 QIHPKVV 408
           +  P  V
Sbjct: 499 RARPVAV 505



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 141/345 (40%), Gaps = 60/345 (17%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITH 130
           +A G  H L L SP    GG V++WG   SGQLG  E  +  L P  +   +     I  
Sbjct: 63  IAAGTQHSLYL-SP----GGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALE----NIVS 113

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           + +G  HS  +   G ++T G  + GQLG G     ++P++V+     +V  +A G  HS
Sbjct: 114 VVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGL--DSVVAVAAGDFHS 171

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           L L +D     V+ +G+   GQLG  +   +    P+   GL+   +V ++A  D + A+
Sbjct: 172 LALRED---GTVWAWGTNFHGQLG--RGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAV 224

Query: 251 SAEGHLYTWG-RGFNSTSDVNCPQSL-PSSLS----FSQAALGWNHVLVLTGDGEVLMLG 304
             +G +  WG  G     D    Q L P  +S     ++   G  H L L  DG V   G
Sbjct: 225 LEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWG 284

Query: 305 GSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
            +  G L D        P+ V  LE+V  +  +    +A                     
Sbjct: 285 SNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDSLA--------------------- 323

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                        + +  A+  WG    GQLG G+T D+  P  V
Sbjct: 324 -------------LLDTGAVFAWGANGSGQLGDGDTTDRATPGPV 355



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 95/234 (40%), Gaps = 45/234 (19%)

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
           +IA G +HSL L     G  V+ +G    GQLG ++  ++ ++ P     L +I  V + 
Sbjct: 62  RIAAGTQHSLYL---SPGGDVWAWGGNGSGQLGGAETSLQGLA-PVRLAALENI--VSVV 115

Query: 242 ANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
           +    S AL A+G ++TWG       G  +T+D   P  +    S    A G  H L L 
Sbjct: 116 SGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDSVVAVAAGDFHSLALR 175

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
            DG V   G + HG L          P     E+V  L+GV  + +AAG +         
Sbjct: 176 EDGTVWAWGTNFHGQLGRGHTQPGLTP-----EQVPGLNGV--VALAAGFD--------- 219

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                            F   + E+  +  WG    GQLG G +  ++ P  V+
Sbjct: 220 -----------------FTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVS 256


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 154/336 (45%), Gaps = 39/336 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN----LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           ++ WG G+ GQLG G+      P          +  +V ++ACG  H L L        G
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRD-----DG 56

Query: 92  KVFSWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
            V S G  S GQLG     G+   +  P+ +   +  +  + H+S G  HS  V + G +
Sbjct: 57  GVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQK--VVHVSCGKEHSLAVCNKGRV 114

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           ++ G GTFGQLG G+      P  +++     V Q+ACG  HS+ L  D    +++ +G 
Sbjct: 115 YSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTND---GRIFSWGQ 171

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
              GQLG+ KD I S + PQ    L  I +  ++A G  S ALS  G +Y WGR  N+  
Sbjct: 172 NIHGQLGLGKD-ISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGR--NNAH 228

Query: 268 DVNCPQSLPSSLSF---SQAAL----------GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +   Q+ P    F   S AAL          G  H  VLT +G V   G    G L   
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLG-- 286

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            R SS+ P     +KV  +DG  V  +A G+ H+ V
Sbjct: 287 -RNSSSSP-KFGPQKVEWIDG-PVSLLACGSYHTLV 319



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 124/252 (49%), Gaps = 27/252 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWGAGT GQLGTG L D L P+ +N  S   V  +ACG  H +ALT+      G++F
Sbjct: 113 RVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTN-----DGRIF 167

Query: 95  SWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG+   GQLG G+ + +   P+ V+  DG    +  ++AG  HS  +S SG ++  G  
Sbjct: 168 SWGQNIHGQLGLGKDISSQASPQQVSALDG--IPLAQVAAGGAHSFALSLSGVVYGWGRN 225

Query: 154 TFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
              QLG    +       P  +++  + +V  ++CG  H+ VL ++     VY FG    
Sbjct: 226 NAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQN---GSVYTFGDDSA 282

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIE----IVGISANGDRS--AALSAEGHLYTWGRGFN 264
           GQLG +     S S P+   G   +E     V + A G       +S  G L ++GRG  
Sbjct: 283 GQLGRN-----SSSSPK--FGPQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRGPL 335

Query: 265 STSDVNCPQSLP 276
             +     QS P
Sbjct: 336 QRNRSGTTQSKP 347



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 33/160 (20%)

Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALEKVSNLD 334
           P+  +    A G  H L+L  DG V   G +  G L    R+ S     S   E +  L+
Sbjct: 34  PADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLG--RRLPSGQEKRSYGPELIQALE 91

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
             KV+ ++ G EHS  V  K                            + +WG G  GQL
Sbjct: 92  TQKVVHVSCGKEHSLAVCNKGR--------------------------VYSWGAGTFGQL 125

Query: 395 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           G G   D++ PK +N   +++     ++V CG   + A++
Sbjct: 126 GTGELGDRLIPKTINALSKYK----VIQVACGHDHSIALT 161


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 32/332 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            K+++ G  T+G+LG G L     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 2998 KIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3051

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L++ 
Sbjct: 3052 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 3109

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3110 GLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3166

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 3167 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3224

Query: 265  STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + 
Sbjct: 3225 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3284

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +P       V  L+G K+ ++A G+ HS   T
Sbjct: 3285 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3311



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 20/257 (7%)

Query: 56  LSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           L+P L+ +LSS   V + A   G H LAL+S      G+VFSWG G  G+LGHG+     
Sbjct: 468 LAPMLIHSLSSRKIVKLAAHPDGQHYLALSS-----NGEVFSWGCGDGGRLGHGDATYLE 522

Query: 114 YPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
            P  +  F+G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     ++P+ 
Sbjct: 523 EPTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPML 582

Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           V++     V  +ACG   +  L     G QV+ +G G  G+LG  +        P++   
Sbjct: 583 VTALKGLKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLVEK 639

Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSFSQ 283
           L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L +        
Sbjct: 640 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD 699

Query: 284 AALGWNHVLVLTGDGEV 300
            A+G  H L LT DGEV
Sbjct: 700 VAVGSTHCLALTDDGEV 716



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G++F
Sbjct: 4047 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 4101

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4102 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4161

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4162 YGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4218

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4219 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4262



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 4035 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 4087

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG LFT G G +G+LGHGD      P  V +     V  +ACG     +L 
Sbjct: 4088 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 4147

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +  +      S AL+ 
Sbjct: 4148 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTK 4202

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4203 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4262

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4263 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4301



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 19/251 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P ++       +   V  +ACG  +   +T     I 
Sbjct: 501 EVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT-----ID 555

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G +++ 
Sbjct: 556 GELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSW 615

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  V    + ++ ++ CG + S+ L KD    QVY +G G  
Sbjct: 616 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 672

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
            +LG   D    V  P++   L   ++V ++       AL+ +G +++WG       F++
Sbjct: 673 QRLGHGTD--EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDT 730

Query: 266 TSDVNCPQSLP 276
            S+   P++LP
Sbjct: 731 LSNKKQPKALP 741



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V+ + CG    +ALT       G V++
Sbjct: 4154 VWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTK-----SGAVYT 4208

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4209 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4266

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4267 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4302



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   +++  +  +    L  ++++G    G+++  A++A+G LY  
Sbjct: 3942 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3997

Query: 260  G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G       G   T  V+ P  L S   +   + A+  G  H L L+ +GEV   G +  G
Sbjct: 3998 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4057

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R    RP       + +L GV+V+ IAAG  HSA +T                 
Sbjct: 4058 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITA---------------- 4096

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                      +  + TWG G +G+LG G++ DQ+ PK+V   D  Q     ++V CGSG
Sbjct: 4097 ----------SGELFTWGKGRYGRLGHGDSEDQLKPKLV---DALQGHRV-IDVACGSG 4141



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 154/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3997

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3998 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GEVYSWGEA 4054

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  +E+V I+A G  SA ++A G L+TWG+G     
Sbjct: 4055 EDGKLGHGN---RSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 4111

Query: 264  -NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +  S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4112 GHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD 4171

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V ++  G++ S  +T        GK  + RL   S     
Sbjct: 4172 GCKIPM-----KIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4226

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4227 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4286

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4287 QGKKINR-----VACGSAHTLAWS 4305



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 66/297 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G LG   + + S P+   S  +  V QI C  +  L+L             SG      
Sbjct: 414 WGLLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLIL-----------SSSG-----A 457

Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFNS 265
           V     +S +L P +   L   +IV ++A  +G    ALS+ G +++WG       G   
Sbjct: 458 VYTQNYKSTTLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD 517

Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            + +  P ++ ++ +  QA       A G  +  V+T DGE+   G  ++G L       
Sbjct: 518 ATYLEEP-TMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSED 576

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            T P+      V+ L G+KV+ +A G+  +  +                         + 
Sbjct: 577 QTTPM-----LVTALKGLKVVDVACGSGDAQTL------------------------AVT 607

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           EN  + +WG G++G+LG G +     PK+V   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 608 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLV---EKLQDLDI-VKVCCGSQFSVALTK 660



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2943 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 3000

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  +  P+ +   S+    + A+  G  H + LT DG+V   G  
Sbjct: 3001 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3060

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3061 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITS------------- 3102

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + +WG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3103 -------------SGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRV------IQVA 3143

Query: 425  CGS 427
            CGS
Sbjct: 3144 CGS 3146



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4257 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKL 4315


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 177/420 (42%), Gaps = 114/420 (27%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG G  G+LG     D  SP++++  S   V  +ACG  H  ALT       G+V+
Sbjct: 324 EVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVACGEYHTCALTD-----SGEVY 378

Query: 95  SWGRGSSGQLGHGEMVDA-------LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           +WG   S      ++VD        L  K     +G   +I+ I+ G  H+  VS  G L
Sbjct: 379 AWGNDVSC----SDLVDEGRIRSQWLTHKLSLPVEG--ISISSIACGEWHTAIVSSCGRL 432

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           FT GDGTFG LGHG Y S SSP +V S     V  +ACG  H+                 
Sbjct: 433 FTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHTAA--------------- 477

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----F 263
                                        I+ ISA  +R    ++ G L+TWG       
Sbjct: 478 -----------------------------IIEISA--ERFKYNTSTGKLFTWGDADEGRL 506

Query: 264 NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               +VN  + +P+ +S      F Q + G    L LT  G+V  +G + +G L +P   
Sbjct: 507 GHADNVN--KLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPH-- 562

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
              +  +V +E +   + VK+I  + G+ H AV+T                         
Sbjct: 563 --VKDRAVVVEGMLKQEYVKMI--SCGSYHVAVLTS------------------------ 594

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
             + ++ TWG GE+G+LGLG+T ++  P  V        RD Q++ + CG  FT AI  H
Sbjct: 595 --SGSVYTWGKGENGELGLGDTENRYTPCFVEAL-----RDRQVDTITCGPSFTVAICLH 647


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 112/233 (48%), Gaps = 31/233 (13%)

Query: 18  NNAKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQLL 61
           N  +P+I       Q VKV                +SWG  T GQLG G L    + +  
Sbjct: 468 NKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPT 527

Query: 62  NLSSLSSVSML--ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
            L+SL  V ++  ACGG H  ALT     I G VF WG+   GQLG G   +  YP   T
Sbjct: 528 ELTSLRGVPLVRVACGGFHSFALT-----ISGSVFGWGKNDVGQLGLGNKENKSYP---T 579

Query: 120 FFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
                R   + HI+ G +H+  ++  G +F  G G+ GQLGHG   +  +P KV   +  
Sbjct: 580 LLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGS 639

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           ++ Q+ CG  H+LVL  +    ++Y FG G  GQLG  +D  RS S PQ   G
Sbjct: 640 DITQVTCGKHHTLVL--EGSKGRLYAFGQGIHGQLG--QDEARSCSNPQRVPG 688



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 139/332 (41%), Gaps = 52/332 (15%)

Query: 93  VFSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            F WG    GQLG    G        K VT   G R  +  IS G +H+G V D G L+ 
Sbjct: 3   TFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQR--VQSISCGKHHTGIVLDDGTLYM 60

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG  + GQLG    R+   PV+VS+     +  +ACG  H+L +       QV G+G   
Sbjct: 61  CGANSKGQLGQD--RNQYKPVQVSALETVVIKHVACGDDHTLAVSDR---GQVLGWGRND 115

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-------- 261
           RGQ G++   I +   P++   L   + V +      S AL+ +G L++WG         
Sbjct: 116 RGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGI 175

Query: 262 GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G   T+  + P  L S   +   + A G  H   LT  G V   G +  G L    + + 
Sbjct: 176 GTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENK 235

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + N+    V  IA G +H+A++T                           
Sbjct: 236 AYP-----TLLRNMRSQMVKHIACGQDHTAMLTA-------------------------- 264

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 410
           +  +  +G G  GQLG G+  ++++P KV++L
Sbjct: 265 DGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDL 296



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 153/334 (45%), Gaps = 37/334 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGKV 93
           ++  GA + GQLG  R  ++  P  + +S+L +V +  +ACG  H LA++       G+V
Sbjct: 58  LYMCGANSKGQLGQDR--NQYKP--VQVSALETVVIKHVACGDDHTLAVSDR-----GQV 108

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
             WGR   GQ G         P+P        Y    +  G  HS  ++  G LF+ GD 
Sbjct: 109 LGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDN 168

Query: 154 TFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           T+GQLG G   ++ +  P +++S     + ++ACG  HS  L    +   V+G+G    G
Sbjct: 169 TYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFAL---TISGSVFGWGKNDVG 225

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------N 264
           QLG+     +  + P +   +    +  I+   D +A L+A+G ++ +G+G        +
Sbjct: 226 QLGLGNKENK--AYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS 283

Query: 265 STSDVNCPQSLPSSL--SFSQAALGWNHVLVLTG-DGEVLMLGGSHHGMLSDPERVSSTR 321
           + ++VN P+ +   +    +Q   G +H LVL G  G +   G   HG L   E  S + 
Sbjct: 284 NYNEVN-PRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSN 342

Query: 322 PLSV--------ALEKVSNLDGVKVIQIAAGAEH 347
           P  V        + EK S+  G  V  I AG  H
Sbjct: 343 PQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHH 376



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 32/334 (9%)

Query: 34  VKVWSWGAGTDGQLGT----GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           +  + WG+  +GQLG     G+   E++ ++  LS    V  ++CG  H   +       
Sbjct: 1   MATFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSG-QRVQSISCGKHHTGIVLD----- 54

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G ++  G  S GQLG     D    KPV         I H++ G +H+  VSD G +  
Sbjct: 55  DGTLYMCGANSKGQLGQ----DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLG 110

Query: 150 CGDGTFGQ--LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G    GQ  L  GD  +   P  +    +    ++ CG  HS+ L +D    +++ +G 
Sbjct: 111 WGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRD---GRLFSWGD 167

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
              GQLG+          P     L  + +V ++  G  S AL+  G ++ WG+      
Sbjct: 168 NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQL 227

Query: 262 GFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G  +  +   P  L +  S      A G +H  +LT DG V + G    G L      + 
Sbjct: 228 GLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNE 287

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
             P      KV +L G  + Q+  G  H+ V+ G
Sbjct: 288 VNP-----RKVIDLMGSDITQVTCGKHHTLVLEG 316



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 34  VKVWSWGAGTDGQ--LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           V+V  WG    GQ  L TG + ++  P++L   +      + CG  H +ALT       G
Sbjct: 446 VQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTR-----DG 500

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           ++FSWG  + GQLG G +V     +P          +  ++ G  HS  ++ SG +F  G
Sbjct: 501 RLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWG 560

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
               GQLG G+  + S P  + +  ++ V  IACG  H+ +L  D     V+ FG G  G
Sbjct: 561 KNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTAD---GGVFLFGQGSEG 617

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWGRGF------N 264
           QLG   +    V+ P+  I L   +I  ++     +  L  ++G LY +G+G       +
Sbjct: 618 QLGHGSN-YNEVN-PRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD 675

Query: 265 STSDVNCPQSLP 276
                + PQ +P
Sbjct: 676 EARSCSNPQRVP 687



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 19/251 (7%)

Query: 35  KVWSWGAGTDGQ--LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V  WG    GQ  L TG + ++  P++L   +      + CG  H +ALT       G+
Sbjct: 107 QVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTR-----DGR 161

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +FSWG  + GQLG G +V     +P          +  ++ G  HS  ++ SG +F  G 
Sbjct: 162 LFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGK 221

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  + + P  + +  ++ V  IACG  H+ +L  D     V+ FG G  GQ
Sbjct: 222 NDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTAD---GGVFLFGQGSEGQ 278

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWGRGF------NS 265
           LG   +    V+ P+  I L   +I  ++     +  L  ++G LY +G+G       + 
Sbjct: 279 LGHGSN-YNEVN-PRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDE 336

Query: 266 TSDVNCPQSLP 276
               + PQ +P
Sbjct: 337 ARSCSNPQRVP 347



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 178/440 (40%), Gaps = 93/440 (21%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG G   ++  P LL       V  +ACG  H   LT+      G VF 
Sbjct: 216 VFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTA-----DGGVFL 270

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS-GCLFTCGDGT 154
           +G+GS GQLGHG   + + P+ V    G    IT ++ G +H+  +  S G L+  G G 
Sbjct: 271 FGQGSEGQLGHGSNYNEVNPRKVIDLMGS--DITQVTCGKHHTLVLEGSKGRLYAFGQGI 328

Query: 155 FGQLGHGDYRSHSSPVKV-------------SSFVNKNVHQIACGMRHSL---------- 191
            GQLG  + RS S+P +V             SS   + V  I  G  H            
Sbjct: 329 HGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDI 388

Query: 192 ---VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
              +L +D +  +++        QL                  L  + I  ++   D + 
Sbjct: 389 QIKLLFRD-ISTRIFF-------QLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTL 440

Query: 249 ALSAEGHLYTWGRGFN-----STSDV-NCPQSLP----SSLSFSQAALGWNHVLVLTGDG 298
           A+S    +  WGR        +T D+ N P+       +S  F +   G  H + LT DG
Sbjct: 441 AVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDG 500

Query: 299 EVLMLGGSHHGMLSDPERVS--STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            +   G + +G L     V+  + RP      ++++L GV ++++A G  HS  +T    
Sbjct: 501 RLFSWGDNTYGQLGIGTLVTNYTDRP-----TELTSLRGVPLVRVACGGFHSFALT---- 551

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                 IS + F                 WG  + GQLGLGN  ++ +P ++      +N
Sbjct: 552 ------ISGSVF----------------GWGKNDVGQLGLGNKENKSYPTLL------RN 583

Query: 417 RDTQL--EVFCGSGFTYAIS 434
             +Q+   + CG   T  ++
Sbjct: 584 MRSQMVKHIACGQDHTAMLT 603



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 31/299 (10%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  +ACG  H LA++    V+G     WGR   GQ G         P+P        Y  
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLG-----WGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACG 186
             +  G  HS  ++  G LF+ GD T+GQLG G   ++ +  P +++S     + ++ACG
Sbjct: 484 VKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 543

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
             HS  L    +   V+G+G    GQLG+     +  S P +   +    +  I+   D 
Sbjct: 544 GFHSFAL---TISGSVFGWGKNDVGQLGLGNKENK--SYPTLLRNMRSQMVKHIACGQDH 598

Query: 247 SAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTG- 296
           +A L+A+G ++ +G+G        ++ ++VN P+ +   +    +Q   G +H LVL G 
Sbjct: 599 TAMLTADGGVFLFGQGSEGQLGHGSNYNEVN-PRKVIDLMGSDITQVTCGKHHTLVLEGS 657

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSV--------ALEKVSNLDGVKVIQIAAGAEH 347
            G +   G   HG L   E  S + P  V        +  K S+  G  V  I AG  H
Sbjct: 658 KGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTAKNSSSKGRVVRCIYAGGHH 716



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 161/412 (39%), Gaps = 80/412 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ +G G++GQLG G  ++E++P+ +     S ++ + CG  H L L        G++++
Sbjct: 268 VFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSK----GRLYA 323

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G+G  GQLG  E      P+ V         + H S   N S       C++  G   F
Sbjct: 324 FGQGIHGQLGQDEARSCSNPQRVP-----GPWVPHSSTEKNSSSKGRVVRCIYAGGHHCF 378

Query: 156 GQLGHGD--------YRSHSSPV------------------KVSSFVNKNVHQIACGMRH 189
               +          +R  S+ +                           +  +ACG  H
Sbjct: 379 STATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDH 438

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +L +       QV G+G   RGQ G++   I +   P++   L   + V +      S A
Sbjct: 439 TLAVSDRV---QVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMA 495

Query: 250 LSAEGHLYTWGR--------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
           L+ +G L++WG         G   T+  + P  L S   +   + A G  H   LT  G 
Sbjct: 496 LTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGS 555

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   G +  G L    + + + P       + N+    V  IA G +H+A++T       
Sbjct: 556 VFGWGKNDVGQLGLGNKENKSYP-----TLLRNMRSQMVKHIACGQDHTAMLTA------ 604

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 410
                               +  +  +G G  GQLG G+  ++++P KV++L
Sbjct: 605 --------------------DGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDL 636


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 165/382 (43%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E+   P+         V  + CG  H + L        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G +H+  ++D G +F+ G G+ G
Sbjct: 59  GCNDLGQLGHEKPRKK--PEHVVALDAQ--IIVAVSGGESHTLALNDKGQIFSWGLGSDG 114

Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  ++      P  +    +  + Q+ACG RHS  L K   G QV+ +G  + GQLG+
Sbjct: 115 QLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSK---GGQVFSWGQNQFGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                 S+S PQ+   L  I    +SA G  S A++  G ++ WGR      G N T+D 
Sbjct: 172 GMHG-SSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S      + G +H   LT +G V   G   +G L          P     
Sbjct: 231 WFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QI+ G +H+              +++TP            +  + ++G
Sbjct: 286 RKVFELMGNIVTQISCGRQHT--------------LAFTP-----------SSGKMYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG  +TC++  P  V 
Sbjct: 321 LGGNGQLGTRSTCNRKSPAPVK 342



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     +S PQ++        + L+ GGAH  A+T     + G V
Sbjct: 157 QVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D  +P  +      R  + ++S G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDTNDRWFPALLKSLRSQR--VIYVSCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QI+CG +H+L         ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPS--SGKMYSFGLGGNGQL 327

Query: 214 GVSKDRIRSVSLP 226
           G      R    P
Sbjct: 328 GTRSTCNRKSPAP 340



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 19/235 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG G+DGQLG     + +  P+ +   S   ++ +ACG  H  AL+      GG+V
Sbjct: 104 QIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSK-----GGQV 158

Query: 94  FSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           FSWG+   GQLG   HG  +    P+ +    G  +    +SAG  HS  ++ SG +F  
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIST--PQIIQSLQGIPF--AQLSAGGAHSFAITLSGAVFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ V  ++CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWGRGFN 264
           GQLG   +       P+    L    +  IS     + A + + G +Y++G G N
Sbjct: 272 GQLG--HNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 164/371 (44%), Gaps = 51/371 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGKV 93
           V++ G    GQLG    H++   +  ++ +L +  ++A  G  +H LAL        G++
Sbjct: 55  VYTCGCNDLGQLG----HEKPRKKPEHVVALDAQIIVAVSGGESHTLALNDK-----GQI 105

Query: 94  FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FSWG GS GQLG     + +  P+ +      +  I  ++ G+ HS  +S  G +F+ G 
Sbjct: 106 FSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQ--IAQVACGYRHSHALSKGGQVFSWGQ 163

Query: 153 GTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             FGQLG G +  S S+P  + S       Q++ G  HS  +    L   V+G+G  K G
Sbjct: 164 NQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAI---TLSGAVFGWGRNKFG 220

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG++    R    P +   L    ++ +S   D +AAL+ EG ++T+G       G NS
Sbjct: 221 QLGLNDTNDR--WFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRP 322
           T+    P+ +   +    +Q + G  H L  T   G++   G   +G L      +   P
Sbjct: 279 TNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSP 338

Query: 323 LSVALEKVSNLDGVK--------VIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
             V    V++   ++        + +I AG + S            F   Y+P   PF  
Sbjct: 339 APVKGPFVASAAPIESESEQCFCIHRIYAGGDQS------------FAHYYSPNVSPF-- 384

Query: 375 NVIAENRAIMT 385
           ++ + NR I T
Sbjct: 385 SIWSTNRGICT 395


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 151/332 (45%), Gaps = 37/332 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG G  G+LG         P ++      +V+M+ACGG+H +AL S      G+VFS
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSK-----GQVFS 218

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD- 152
           WG G  G LGHG + D   P      DG      + H++   NHS  +S+ G L+T G  
Sbjct: 219 WGAGPQGCLGHGNLRDRYSP---LMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKA 275

Query: 153 GTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G F  LG+ D      + P  V +     + Q+ACG  H+LV+ ++    +VY FG  K 
Sbjct: 276 GPF--LGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEE---GRVYSFGINKF 330

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
           G+LG   D  ++++ P +   L  + I  +S     SAA+  +G L+ WG G        
Sbjct: 331 GELGQGHD--KAITKPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQG 386

Query: 271 CPQSL--PSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS--T 320
            P+SL  P+ ++          + G+ H   +T +G     G +       P  V    +
Sbjct: 387 EPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELS 446

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            P  + L       G++  QI  GA  + +VT
Sbjct: 447 SPRGIVLPS-----GIRPTQINCGANFTVLVT 473



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 54/343 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GK 92
           +V+SWGAG  G LG G L D  SP +++   L  V+++     HV    + S+VI   G 
Sbjct: 215 QVFSWGAGPQGCLGHGNLRDRYSPLMID-GPLRDVNVV-----HVACYENHSAVISEDGN 268

Query: 93  VFSWGRG---------SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           +++WG+          S  +     +VDALY        G R  I  ++ G +H+  + +
Sbjct: 269 LYTWGKAGPFLGYMDDSVTKQTKPRLVDALY--------GTR--IVQVACGRSHTLVIDE 318

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
            G +++ G   FG+LG G  ++ + P  V + V  ++ +++CG  HS  + +D +   ++
Sbjct: 319 EGRVYSFGINKFGELGQGHDKAITKPTMVPNLV--SICKVSCGRHHSAAIDEDGV---LF 373

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G RGQLG  +   +S+  P    G +D  +  +S     +AA++A G  Y WG   
Sbjct: 374 MWGWGARGQLG--QGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGD-- 429

Query: 264 NSTSDVNCPQS------------LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           N++S    P S            LPS +  +Q   G N  +++T  G++   G +  G L
Sbjct: 430 NASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQL 489

Query: 312 SDPE-RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            + E + + ++P+      V +L   +V  +A G +H   + G
Sbjct: 490 GNGEAKKTFSQPMP-----VESLSEKRVKMVACGEDHIGCLVG 527



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 131/305 (42%), Gaps = 51/305 (16%)

Query: 140 FVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
            + D+ C L+  G G  G+LGH D +    P  V S + +NV  IACG  H++ L     
Sbjct: 156 LLKDNSCDLYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSK-- 213

Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
             QV+ +G+G +G LG    R R   L  +   L D+ +V ++   + SA +S +G+LYT
Sbjct: 214 -GQVFSWGAGPQGCLGHGNLRDRYSPL-MIDGPLRDVNVVHVACYENHSAVISEDGNLYT 271

Query: 259 WGRG---FNSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           WG+         D    Q+ P  +         Q A G +H LV+  +G V   G +  G
Sbjct: 272 WGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFG 331

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L      + T+P       V NL  V + +++ G  HSA                    
Sbjct: 332 ELGQGHDKAITKP-----TMVPNL--VSICKVSCGRHHSA-------------------- 364

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 429
                  I E+  +  WGWG  GQLG G       P  VN    F ++  + +V CG G 
Sbjct: 365 ------AIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVN---GFNDQPLE-DVSCGYGH 414

Query: 430 TYAIS 434
           T AI+
Sbjct: 415 TAAIT 419



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 21/255 (8%)

Query: 55  ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY 114
           +  P+L++    + +  +ACG +H L +        G+V+S+G    G+LG G   D   
Sbjct: 289 QTKPRLVDALYGTRIVQVACGRSHTLVIDEE-----GRVYSFGINKFGELGQGH--DKAI 341

Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS 174
            KP      +  +I  +S G +HS  + + G LF  G G  GQLG G+ +S  SP  V+ 
Sbjct: 342 TKPTMV--PNLVSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNG 399

Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
           F ++ +  ++CG  H+  +  + +    Y +G     Q GV       +S P+  +    
Sbjct: 400 FNDQPLEDVSCGYGHTAAITANGVA---YCWGDNASSQCGVPSSVYGELSSPRGIVLPSG 456

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQSLP----SSLSFSQAA 285
           I    I+   + +  +++ G L+TWG        N  +     Q +P    S       A
Sbjct: 457 IRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSEKRVKMVA 516

Query: 286 LGWNHVLVLTGDGEV 300
            G +H+  L G G V
Sbjct: 517 CGEDHIGCLVGHGWV 531


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 99/413 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG  + G+LG G   + + P+L+   + ++V  +ACG  H  A+T     + G+++
Sbjct: 299 ELFTWGEESGGRLGHGVGKNVIQPRLVEAMASTTVDFVACGEFHTCAVT-----MAGELY 353

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK +    +G +  +  ++ G  H+  ++ +G LFT G
Sbjct: 354 TWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAL--VTCGPWHTALITSTGQLFTFG 411

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--------GNQVY 203
           DGTFG LGHGD  + S P +V S        +ACG+ H+  +++  +         ++++
Sbjct: 412 DGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLF 471

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G + +LG                            +GD+ A L             
Sbjct: 472 TWGDGDKNRLG----------------------------HGDKDARL------------- 490

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
               +  C   L  S +F + A G +  + LT  GEV  +G S +G L +P+  S  +  
Sbjct: 491 ----EPTCVSLLIDS-NFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQ--SDGKVP 543

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  +K   L G  V +IA GA H AV+T K                            +
Sbjct: 544 CLVKDK---LAGESVEEIACGAYHVAVLTSK--------------------------NEV 574

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS ++ AI  H
Sbjct: 575 YTWGKGANGRLGHGDVEDRKTPTLV---EALKDRHVKY-IACGSNYSAAICLH 623



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 78/306 (25%)

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
            D L P+P+         +  I+ G  H+  V+  G LFT G+ + G+LGHG  ++   P
Sbjct: 265 TDILLPRPLE--SNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQP 322

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS--L 225
             V +  +  V  +ACG  H+  +    +  ++Y +G G    G LG   D    VS  +
Sbjct: 323 RLVEAMASTTVDFVACGEFHTCAV---TMAGELYTWGDGTHNAGLLGHGTD----VSHWI 375

Query: 226 PQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
           P+   G L  +++  ++     +A +++ G L+T+                         
Sbjct: 376 PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTF------------------------- 410

Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
                      GDG   +LG   HG   D E VS  R       +V +L G++ I +A G
Sbjct: 411 -----------GDGTFGVLG---HG---DRENVSYPR-------EVESLSGLRTIAVACG 446

Query: 345 AEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH 404
             H+A V      V + +   +             +  + TWG G+  +LG G+   ++ 
Sbjct: 447 VWHTAAV------VEVIVTQSS---------ASVSSDKLFTWGDGDKNRLGHGDKDARLE 491

Query: 405 PKVVNL 410
           P  V+L
Sbjct: 492 PTCVSL 497


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pongo abelii]
          Length = 4581

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3860

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 3861 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3920

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 3921 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3977

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 3978 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4021



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3794 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3846

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 3847 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3906

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 3907 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3961

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 3962 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4021

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4022 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4060



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 32/297 (10%)

Query: 89   IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
            + GKVFSWG G  G+LGH   +    P+ +      R  I  I+ G +HS  ++ SG L+
Sbjct: 2817 VDGKVFSWGEGDDGKLGHFSRM----PRLIEALKTKR--IRDIACGSSHSAALTSSGELY 2870

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFG 206
            T G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+  G
Sbjct: 2871 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSLG 2927

Query: 207  SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
             G   ++G   + ++  ++PQ    L+   +  I      S AL+  G ++TWG+G    
Sbjct: 2928 DGDLWKIGPGPE-VKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2986

Query: 263  FNSTSDVNC--PQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                SDV+   PQ    L      + +  G  H L +T  G+V   G + HG   +    
Sbjct: 2987 LGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3046

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
             + +P       V  L+G K+ ++A G+ HS       V T   H   LF+ +  P 
Sbjct: 3047 VNRKP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFMTARDPL 3098



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 3913 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3967

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 3968 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4025

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4026 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4061



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3756

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3757 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3813

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3814 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3870

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 3871 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3930

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 3931 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3985

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 3986 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4045

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4046 QGKKVNR-----VACGSAHTLAWS 4064



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 168/441 (38%), Gaps = 65/441 (14%)

Query: 7    EETEKGKS-ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
            EE EKG S +L       +E     +   KV+SWG     QLG  +      P      S
Sbjct: 2684 EEDEKGNSGSLAKRMAAGLESAATIR--TKVFSWGLNDKDQLGGLKNKKIKVPSFSETLS 2741

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP---VTFFD 122
              +V  +A G   + A+T     + GKV++ G  +        +     P P   +T   
Sbjct: 2742 ALNVVQVAGGSKSLFAVT-----VEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALS 2796

Query: 123  GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
             +      + +G + +GF    G +F+ G+G  G+LGH        P  + +   K +  
Sbjct: 2797 SYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGH----FSRMPRLIEALKTKRIRD 2852

Query: 183  IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGIS 241
            IACG  HS  L       ++Y +G G+ G+LG   +  +    + +V +G H +  V   
Sbjct: 2853 IACGSSHSAALTS---SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACG 2908

Query: 242  ANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLP--SSLSFSQAALGWNHVL 292
            +   ++ AL+ EG +++ G G              N PQ++   +     Q   G    L
Sbjct: 2909 SRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSL 2968

Query: 293  VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA-AGAEHSAVV 351
             LT  G V   G   +  L     V   +P     + V  L G K++  + +GA H   V
Sbjct: 2969 ALTKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVACSCSGALHCLAV 3023

Query: 352  TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
            T                          ++  +  WG  +HGQ G G T     P +V  G
Sbjct: 3024 T--------------------------DSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-G 3056

Query: 412  DEFQNRDTQLEVFCGSGFTYA 432
             E Q       V CGS  + A
Sbjct: 3057 LEGQK---ITRVACGSSHSVA 3074



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4016 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4074


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 182/413 (44%), Gaps = 99/413 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG  + G+LG G   + + P+L+   + ++V  +ACG  H  A+T     + G+++
Sbjct: 299 ELFTWGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVT-----MAGELY 353

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK +    +G +  +  ++ G  H+  ++ +G LFT G
Sbjct: 354 TWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAL--VTCGPWHTALITSTGQLFTFG 411

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD  + S P +V S        +ACG+ H+  +                  
Sbjct: 412 DGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAI------------------ 453

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----- 266
                                  IE++       +S+A  + G L+TWG G  +      
Sbjct: 454 -----------------------IEVIVT-----QSSASVSSGKLFTWGDGDKNRLGHGD 485

Query: 267 SDVNC-PQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            D    P  +PS +  +F + A G +  + LT  G V  +G + +G L +P+   S   L
Sbjct: 486 KDARLEPTCVPSLIEDNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQ---SDGKL 542

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
              +E      G  V +IA GA H AV+T K                            +
Sbjct: 543 PCLVE--DKFAGESVEEIACGAYHVAVLTSK--------------------------NEV 574

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS ++ AI  H
Sbjct: 575 FTWGKGANGRLGHGDVEDRKSPTLV---EALKDRHVKY-IACGSNYSSAICLH 623


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 189/424 (44%), Gaps = 69/424 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW+ G   DG +    +  D L+P+ L  + +  V  + CG  HV  +T       G+V
Sbjct: 218 EVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTR-----QGEV 272

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG    G+LGHG  VD   PK V F       I  ++ G  H+  VS SG LF+ GDG
Sbjct: 273 FTWGEEVGGRLGHGIQVDISRPKLVEFL--ALTNIDFVACGEYHTCVVSTSGDLFSWGDG 330

Query: 154 --TFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
               G LGHG   SH  P +VS  +    V  +ACG  HS +   +    +++ FG G  
Sbjct: 331 IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 387

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----------SAEGHLYTWG 260
           G LG       SVS P+    L+ ++ V ++ +   +AA+           +   L+TWG
Sbjct: 388 GVLGHGNRE--SVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWG 445

Query: 261 RGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G  +       ++  LP+ +S      F + A G    + LT  G V  +GG+ HG L 
Sbjct: 446 DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           +   +S  +   +  ++   L G  V +IA G  H AV+T +                  
Sbjct: 506 N--SISDGKLPCLVQDR---LVGEFVEEIACGDHHVAVLTSRSE---------------- 544

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                     + TWG G +G+LG G+T D+  P  V   +  ++R  +  + CGS FT +
Sbjct: 545 ----------VFTWGKGANGRLGHGDTEDKRTPTCV---EALRDRHVK-SLSCGSNFTSS 590

Query: 433 ISRH 436
           I  H
Sbjct: 591 ICIH 594



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 22/193 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   +ACG    +ALT+      G VF
Sbjct: 440 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTT-----SGHVF 494

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G  + GQLG+    G++   +  + V  F      +  I+ G +H   ++    +FT 
Sbjct: 495 TMGGTAHGQLGNSISDGKLPCLVQDRLVGEF------VEEIACGDHHVAVLTSRSEVFTW 548

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FG 206
           G G  G+LGHGD     +P  V +  +++V  ++CG   +  +   C+   V G      
Sbjct: 549 GKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCGSNFTSSI---CIHKWVSGADQSIC 605

Query: 207 SGKRGQLGVSKDR 219
           SG R   G ++ R
Sbjct: 606 SGCRQAFGFTRKR 618



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 136/356 (38%), Gaps = 90/356 (25%)

Query: 91  GKVFSWGRG-SSGQLGHGEM------VDALYPKPV---TFFDGHRYTITHISAGWNHSGF 140
           G V+ WG   + G L  G +       D L P+P+      D H+     I  G  H   
Sbjct: 211 GDVYVWGEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQ-----IVCGVRHVAL 265

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V+  G +FT G+   G+LGHG     S P  V      N+  +ACG  H+ V+       
Sbjct: 266 VTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVV---STSG 322

Query: 201 QVYGFGSG--KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
            ++ +G G    G LG   D I      +V+  L  ++++ ++     SA  +A G L+T
Sbjct: 323 DLFSWGDGIHNVGLLGHGSD-ISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFT 381

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           +                                    GDG   +LG  +   +S P+ V 
Sbjct: 382 F------------------------------------GDGAFGVLGHGNRESVSYPKEVQ 405

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           S             L+G+K +++A    H+A +        + ++  T            
Sbjct: 406 S-------------LNGLKTVKVACSIWHTAAI--------VEVMGQT--------GTSM 436

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +R + TWG G+  +LG GN    + P  V+   ++       ++ CG  FT A++
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH----KIACGHTFTVALT 488


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 181/413 (43%), Gaps = 99/413 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG  + G+LG G   D + P+L+   + +SV  +ACG  H  A+T     + G++F
Sbjct: 300 EIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVT-----MAGELF 354

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK ++   +G    +  ++ G  H+  V+ +  LFT G
Sbjct: 355 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG--LQVASVTCGPWHTALVTTTRQLFTFG 412

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD  + + P +V S        +ACG+ H+  +                  
Sbjct: 413 DGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAV------------------ 454

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------ 265
                                  +E++       +S+A  + G L+TWG G  +      
Sbjct: 455 -----------------------VEVIVT-----QSSASVSSGKLFTWGDGDKNRLGHGD 486

Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                 P  +P+    +F + A G +  + LT  G+V  +G + +G L +P+   S   L
Sbjct: 487 KEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQ---SDGKL 543

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
              +E    L G  V +IA GA H AV+T +                            +
Sbjct: 544 PCFVE--DKLLGECVEEIACGAYHVAVLTSR--------------------------NEV 575

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS +T AI  H
Sbjct: 576 YTWGKGANGRLGHGDIEDRKTPTLV---ETLKDRHVKY-IACGSNYTAAICLH 624



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 88/333 (26%)

Query: 110 VDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
            D L PKP+      D H     HI+ G  H+  V+  G +FT G+ + G+LGHG  R  
Sbjct: 266 ADLLLPKPLESNVVLDVH-----HIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDV 320

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
             P  V S    +V  +ACG  H+  +    +  +++ +G G    G LG   D    VS
Sbjct: 321 IQPRLVESLAFTSVDFVACGEFHTCAVT---MAGELFTWGDGTHNAGLLGHGTD----VS 373

Query: 225 --LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSF 281
             +P+   G L  +++  ++     +A ++    L+T+                      
Sbjct: 374 HWIPKRISGPLEGLQVASVTCGPWHTALVTTTRQLFTF---------------------- 411

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
                         GDG   +LG   HG   D + V+  R       +V +L G++ I +
Sbjct: 412 --------------GDGTFGVLG---HG---DKDNVAYPR-------EVESLSGLRTIAV 444

Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
           A G  H+A V      V + +   +             +  + TWG G+  +LG G+   
Sbjct: 445 ACGVWHTAAV------VEVIVTQSS---------ASVSSGKLFTWGDGDKNRLGHGDKEP 489

Query: 402 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           ++ P  V    E+  +    +V CG   T  ++
Sbjct: 490 RLKPTCVPALIEYNFQ----KVACGHSLTVGLT 518


>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Oryzias latipes]
          Length = 397

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 175/423 (41%), Gaps = 82/423 (19%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFS 95
           +WGA + GQLG G   D+L P+L  +S L +  + ++  GG H   +T      GG+VF 
Sbjct: 12  TWGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITE-----GGEVFV 66

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            G+   GQLG G   D    +    F+     +T ++ GW+ S  +++ G L  CG   F
Sbjct: 67  CGQNHKGQLGIGHCADIATFQICPIFN---QRVTDVACGWDFSLLLTEGGRLLACGSNAF 123

Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G+  +H + P+ V    ++ +  +A G+RHSL +        VY +G+G    + 
Sbjct: 124 GQLGVGETVTHIADPLLVEVRFHEPIVSVAAGLRHSLAVNDS---GCVYQWGNGLFSHVD 180

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS---TSDVNC 271
             + R     L Q        + V + A       L+ EG L+ WG   +    TS+   
Sbjct: 181 DKEMRTGDKCLSQK-------KSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGTSESFL 233

Query: 272 PQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST----- 320
           P   P   S       S    GW+H++  T  G V   G   +G L  P   S T     
Sbjct: 234 PSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDSQTPEELL 293

Query: 321 ----------RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
                     R +    E V  L G    QI+ G+EH+  V G                 
Sbjct: 294 AGFITGTSQSRAVCCPAE-VHVLRGAT--QISCGSEHNLAVVGD---------------- 334

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
                       +++WGW EHG  G G   + +HP +++      N    L V CG+G +
Sbjct: 335 -----------RLLSWGWNEHGMCGNGFQTNVLHPGLIS------NLRAVL-VGCGAGHS 376

Query: 431 YAI 433
            A+
Sbjct: 377 MAV 379


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 12/194 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WG   DGQLG GR+    S P+++ NLS +  V + A G AH +AL+     + G 
Sbjct: 142 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 195

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWGR   GQLG G   +   P  +   D  +  +  ++ G  H+  ++ SG +FT GD
Sbjct: 196 VYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQK--VEFLACGGCHTALLTKSGLVFTFGD 253

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH   ++   P  V+  V   V QIACG +H+L  + D    +V+ FGSGK GQ
Sbjct: 254 GKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT--GKVFSFGSGKEGQ 311

Query: 213 LGVSKDRIRSVSLP 226
           LG    R + +  P
Sbjct: 312 LGNGGTRNQLIPRP 325



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 104/237 (43%), Gaps = 42/237 (17%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           KN+ QI CG  HSL L K   G +++ +G    GQLGV +    S S P++   L  + +
Sbjct: 122 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 177

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
           V ISA    S ALS  G++Y+WGR      G   T + + P  + +         A G  
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGC 237

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H  +LT  G V   G   +G L      +  RP       V+ L G +V QIA G +H+ 
Sbjct: 238 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRP-----RLVTGLVGNRVTQIACGRQHT- 291

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
                                   +  +++   + ++G G+ GQLG G T +Q+ P+
Sbjct: 292 ------------------------LAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 324



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 103/266 (38%), Gaps = 67/266 (25%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +H +  G  H LVL  D           GK  +   S +  R   +      L +  I+
Sbjct: 83  KIHSMDQGEEHMLVLSSD-----------GKPFEYKYSIEHARFQCI------LQEKNII 125

Query: 239 GISANGDRSAALSAEGHLYTW----------GRGFNSTSDVNCPQSLPSSLSFSQAALGW 288
            I+     S ALS  G L+ W          GR F STS     ++L S +   Q + G 
Sbjct: 126 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL-SGVPLVQISAGE 184

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            H + L+  G V   G +  G L      +   P       +  LD  KV  +A G  H+
Sbjct: 185 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSC-----IETLDDQKVEFLACGGCHT 239

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A++T                          ++  + T+G G++GQLG  +T +++ P++V
Sbjct: 240 ALLT--------------------------KSGLVFTFGDGKYGQLGHNSTQNELRPRLV 273

Query: 409 N--LGDEFQNRDTQLEVFCGSGFTYA 432
              +G    NR TQ+   CG   T A
Sbjct: 274 TGLVG----NRVTQIA--CGRQHTLA 293


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 165/403 (40%), Gaps = 60/403 (14%)

Query: 21  KPKIEEEEEEQQVVK-VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHV 79
            P + +    +     V +WG   DG+LG G   D  +P  ++L + ++++ +A G  H 
Sbjct: 58  SPTVAQNGPSRDASDTVLAWGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHS 117

Query: 80  LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
           LA+TS      G   +WG    GQLG G   D+  P  V    G   T+T I+AG +HS 
Sbjct: 118 LAVTS-----AGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAG--TTVTAIAAGDDHSL 170

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            V+ +G     GD   G+LG G      +PV V       V  IA G+ HSL L      
Sbjct: 171 AVTSAGTALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTS---A 227

Query: 200 NQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
             V  +G    GQLG           +V LP  T       +  I+A    S A++  G 
Sbjct: 228 GTVLTWGLNSDGQLGDGTTTDSSTPIAVDLPAGT------TVTAIAAGSLHSLAVTTAGT 281

Query: 256 LYTWGR------GFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           +  WG       G  +T++ + P +  LP+S + +    G +H L +T  G  L  G + 
Sbjct: 282 ILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDND 341

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
            G L D    +S+ P++V L   +      V    AG+ HS  VT               
Sbjct: 342 DGQLGDGTTTNSSTPIAVNLPADT-----TVTATTAGSLHSLAVT--------------- 381

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                          I+ WG    G+LG G T +   P  VNL
Sbjct: 382 -----------TAGTILAWGNNSDGRLGDGTTTNSSTPIAVNL 413


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 160/379 (42%), Gaps = 54/379 (14%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           SWG G DGQLG G   D  SP  L+      +  + CG  H +A +        +V+SWG
Sbjct: 34  SWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRL----EVYSWG 89

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  G+LGHG   D   P P+     H   I  I+ G +H   V+  G + + G    GQ
Sbjct: 90  WGDFGRLGHGNSSDLFTPLPIKAL--HGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQ 147

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G+      P K+ +F    +  +A G  H+  + +D     +YG+  GK  + G+S 
Sbjct: 148 LGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGW-DGKIWKFGIS- 202

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY--------TWGRGFNSTSDV 269
           DR   + L +    + D++  G       S  L +  +L+        TW  G +     
Sbjct: 203 DRNDRLFLKEYLCCVRDVD--GAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCFLT 260

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           N  +S  ++  FSQ + GW H + LT DG++   G +  G +     +    P+ V    
Sbjct: 261 NWKRS--ATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 317

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               D  KV+Q++ G  H+  VT                          E   +  WG G
Sbjct: 318 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 347

Query: 390 EHGQLGLGNTCDQIHPKVV 408
            +GQLG+G + D+  P ++
Sbjct: 348 TNGQLGIGESLDRNSPNII 366



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 13/192 (6%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL S     G  V SWGRG  GQLGHG+  D   P  ++  D H+  I
Sbjct: 13  VLIISAGASHSVALLS-----GEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQ--I 65

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +H+   S S   +++ G G FG+LGHG+     +P+ + +     + QIACG 
Sbjct: 66  VSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGD 125

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  D    +V  +G  + GQLG+       V  PQ       I I  ++A  + +
Sbjct: 126 SHCLAVTMD---GEVQSWGRNQNGQLGLGNTEDSLV--PQKIQAFEGIRIKMVAAGAEHT 180

Query: 248 AALSAEGHLYTW 259
           AA++ +G LY W
Sbjct: 181 AAVTEDGDLYGW 192



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 62/283 (21%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  ++V+SWG G  G+LG G   D  +P  +       +  +ACG +H LA+T     + 
Sbjct: 80  QSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVT-----MD 134

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V SWGR  +GQLG G   D+L P+ +  F+G R  I  ++AG  H+  V++ G L+  
Sbjct: 135 GEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 192

Query: 151 GDGTFGQLGHGD----------------------------------------------YR 164
            DG   + G  D                                              +R
Sbjct: 193 -DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWR 251

Query: 165 SHSSPVKVSSFVNKNV---HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
              SP  ++++         QI+ G RH++ L  D    ++YG+G  K GQ+GV  + + 
Sbjct: 252 LGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSD---GKLYGWGWNKFGQVGVGNN-LD 307

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
             S  QV     D ++V +S     + A++   +++ WGRG N
Sbjct: 308 QCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 349



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 140/339 (41%), Gaps = 49/339 (14%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           ISAG +HS  +     + + G G  GQLGHGD    SSP ++S+     +  + CG  H+
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHT 75

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           +   +  L  +VY +G G  G+LG          LP     LH + I  I+       A+
Sbjct: 76  VAYSQSRL--EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGVMIKQIACGDSHCLAV 131

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
           + +G + +WGR      G  +T D   PQ + +   +     A G  H   +T DG++  
Sbjct: 132 TMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYG 191

Query: 303 LGGS--HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV-- 358
             G     G+    +R+     L   L  V ++DG  V+Q        +++   + W+  
Sbjct: 192 WDGKIWKFGISDRNDRLF----LKEYLCCVRDVDGA-VMQPHISFLLWSII---YLWMEQ 243

Query: 359 ----RLFIISYTPFF--------PPFFINVIAENRAIMT---------WGWGEHGQLGLG 397
               R + +  +P F          FF  +    R  M          WGW + GQ+G+G
Sbjct: 244 IWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVG 303

Query: 398 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           N  DQ  P  V   D+       ++V CG   T A++  
Sbjct: 304 NNLDQCSPVQVRFPDD----QKVVQVSCGWRHTLAVTER 338



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ WG    GQ+G G   D+ SP  +       V  ++CG  H LA+T  ++     VF
Sbjct: 288 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNN-----VF 342

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV 118
           +WGRG++GQLG GE +D   P  +
Sbjct: 343 AWGRGTNGQLGIGESLDRNSPNII 366


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 148/326 (45%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G G  G+LG G     + P LL       V  +A   GG H LAL+S      G 
Sbjct: 4006 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4060

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +    PK +    G    I  I+ G +HS  ++ +G L+T G 
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTE--IVDIACGGHHSAAITSAGWLYTWGK 4118

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD     +P  + +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 4119 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4175

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
            G+LG  +       +P     L  + +V +      S AL+  G +YTWG+G      + 
Sbjct: 4176 GKLG--RGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4233

Query: 266  TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D V  P+ + +         A G  H +  T  GEV   G +  G L D    +  RP
Sbjct: 4234 TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRP 4293

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4294 -----RLVHALQGKKITRVACGSAHT 4314



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 16/230 (6%)

Query: 36  VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG G  G+LG G    +DE  P+L+      +++ +ACG  +  AL+S      G++
Sbjct: 526 VYSWGNGDGGRLGHGDRAWYDE--PKLIEALVEKNITFIACGSTYSAALSS-----NGEL 578

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG+ G+LGHG   + + P  VT  +GH        +G + +  V+ SG +F+ GDG
Sbjct: 579 YTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G+  +L
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEAYRL 695

Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G  ++D +R    P++   L   ++  +        AL+ +  +Y WGR 
Sbjct: 696 GHGNEDHVR---YPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRN 742



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 171/419 (40%), Gaps = 63/419 (15%)

Query: 28   EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
            E + Q   V+ WG     QLG  +      P     LS L  V +   GG+  L + S  
Sbjct: 2928 EPQPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHI--AGGSKTLFVVSQE 2985

Query: 87   SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
                GK+++ G G++G+LG G+  +   PKP+ F   +      + +G  H+  ++  G 
Sbjct: 2986 ----GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGK 3041

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            +F+ G+G  G+LGHG+  S   P  + S  +K +  IACG  HS  +       ++Y +G
Sbjct: 3042 VFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS---SGELYTWG 3098

Query: 207  SGKRGQLGVSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
             G+ G+LG      +S   L Q  +G   I+I    A G R A   AL+A+G +Y+WG G
Sbjct: 3099 LGEYGRLGHGDTATQSKPKLVQSLVGQRIIQI----ACGSRDAQTMALTADGLVYSWGDG 3154

Query: 263  ----FNSTSDVNCPQSLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                        C   L     + L   Q   G    L LT  GEV   G   +  L   
Sbjct: 3155 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3214

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                  +P       V  L G KVI +A GA H   VT                      
Sbjct: 3215 NDHHVRKP-----TLVEGLRGKKVIHVAVGALHCLAVT---------------------- 3247

Query: 375  NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG  +HGQ G G T     P +V+ L D   NR     V CGS  + A
Sbjct: 3248 ----DIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNR-----VSCGSSHSIA 3297



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 19/247 (7%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
           G H LALT  +SV     +SWG G  G+LGHG+   A Y +P          IT I+ G 
Sbjct: 514 GTHYLALTQDNSV-----YSWGNGDGGRLGHGDR--AWYDEPKLIEALVEKNITFIACGS 566

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            +S  +S +G L+T G G +G+LGHG+  +   P  V++     V  +ACG   S  L  
Sbjct: 567 TYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCV 626

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
              G  V+ +G G  G+LG  +        P++   L DI +  +   G  SAAL+A G 
Sbjct: 627 TASG-IVFSWGDGNYGKLG--RGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGE 683

Query: 256 LYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           +YTWG+      G  +   V  P+   +  +    +  +G  HVL LT D  +   G + 
Sbjct: 684 VYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRND 743

Query: 308 HGMLSDP 314
           +G + DP
Sbjct: 744 YGQI-DP 749



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 72/156 (46%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  +   +   V  + CG    +ALT       G +++
Sbjct: 4167 VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTR-----SGAIYT 4221

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  I  I+ G  H    +D G +FT GD   
Sbjct: 4222 WGKGDYHRLGHGTDDHVRRPRKVAALQGKK--IISIATGSLHCVACTDKGEVFTWGDNDE 4279

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V +   K + ++ACG  H+L
Sbjct: 4280 GQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTL 4315



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 150/386 (38%), Gaps = 62/386 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P         R     ++ G      V+  G ++  
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTADGKVYAT 4010

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S   P  + S  +  V ++A   G +H L L  +     VY +G G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 4067

Query: 209  KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
              G+LG    +S DR      P++   L   EIV I+  G  SAA+++ G LYTWG+   
Sbjct: 4068 DDGKLGHGNRLSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121

Query: 262  ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               G   + D   P+ + +   +    +    G    L +T D  V   G   +G L   
Sbjct: 4122 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4181

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYT 366
                   P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   +  
Sbjct: 4182 GSDGCKIPM-----KIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4236

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG G T     P++V
Sbjct: 4237 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4296

Query: 409  NLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +     Q +     V CGS  T A S
Sbjct: 4297 H---ALQGKKIT-RVACGSAHTLAWS 4318



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 30/239 (12%)

Query: 26  EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSP 85
           ++   Q   +V +WG+    +LG G      SP   +  +   +  L C    ++ L+  
Sbjct: 428 QKNHNQTFQEVIAWGSV---KLGNGS-----SPFYYDTIAELGIKQLCCTERALMILS-- 477

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
              + G V+    GS  Q  + + V     KP+     H       S G ++     D+ 
Sbjct: 478 ---VNGNVYMMYYGSETQ--YPQRVYGFSEKPIIMIASH-------SDGTHYLALTQDNS 525

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            +++ G+G  G+LGHGD   +  P  + + V KN+  IACG  +S  L  +    ++Y +
Sbjct: 526 -VYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN---GELYTW 581

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G G  G+LG       +V +P +   L  H +  V   +   ++  ++A G +++WG G
Sbjct: 582 GRGNYGRLGHGNS--DNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 638



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G   +LG G       P+++++     V  L  G  HVLALT    + G    
Sbjct: 683 EVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYG---- 738

Query: 95  SWGRGSSGQL 104
            WGR   GQ+
Sbjct: 739 -WGRNDYGQI 747



 Score = 38.1 bits (87), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 114/290 (39%), Gaps = 63/290 (21%)

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           +LG+G     SSP    +     + Q+ C  R  ++L    +   VY    G   Q    
Sbjct: 445 KLGNG-----SSPFYYDTIAELGIKQLCCTERALMIL---SVNGNVYMMYYGSETQY--- 493

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRS--AALSAEGHLYTWGRG------FNSTSD 268
                    PQ   G  +  I+ I+++ D +   AL+ +  +Y+WG G          + 
Sbjct: 494 ---------PQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAW 544

Query: 269 VNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            + P+ + + +  + +  A G  +   L+ +GE+   G  ++G L      +   P    
Sbjct: 545 YDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIP---- 600

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
              V+ L+G  V+ +A G+  S  +                         +  +  + +W
Sbjct: 601 -TLVTALNGHMVVYVACGSGDSQTL------------------------CVTASGIVFSW 635

Query: 387 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G G +G+LG G       PK+V   D+  + +   +V+CG  F+ A++ +
Sbjct: 636 GDGNYGKLGRGGCDGSKTPKIV---DKLLDINVA-KVYCGGQFSAALTAY 681


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 148/337 (43%), Gaps = 27/337 (8%)

Query: 42  GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG---GAHVLALTSPSSVIGGKVFSWGR 98
           G  G+LG G   ++  P+L+       +  L        H LA+ S      G+++SWG 
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIAS-----DGRIYSWGD 495

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
           G  G+LGHG  V    PK +         +  I+ G+ HS  ++  G L+T GDG +G+L
Sbjct: 496 GDYGKLGHGNHVTQKSPK-LILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRL 554

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           GHGD  S S P  V       V  ++CG   ++V+ +D     V+ FG+G  G+LG   D
Sbjct: 555 GHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQD--ATTVWSFGAGDNGKLG-HGD 609

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQ 273
             R V  P+V   L  + I  +      S AL++ G ++ WG G       + +    P+
Sbjct: 610 TSR-VYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLVPK 668

Query: 274 SLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            L     L     A+G NH L LT D +V   G +  G       + +     +   KV+
Sbjct: 669 RLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCG----LGNNNSPVLLPRKVT 724

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
             D   + QI+ G  HS   T      R  + SY PF
Sbjct: 725 GFDNHVIYQISVGTSHSIAWTA-LPTDRCIVTSYKPF 760



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 152/331 (45%), Gaps = 32/331 (9%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGA---HVLALTSPSSVIG 90
            V + G G+ G+LG G   D+L P+L  +++L    V+ LA       H LALT       
Sbjct: 3458 VLACGEGSYGRLGQGN-SDDL-PRLRPITALQGFVVTELATSTGLEGHSLALTE-----T 3510

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G+VFSWG G  G+LGHG       P+ +    G    + H++ G  HS  V+  G LFT 
Sbjct: 3511 GEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGE--DVLHVACGHKHSAIVTVDGKLFTF 3568

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G    G+LG G+  +   P +V++     V  IACG  H++V+  D     V+ FG G+ 
Sbjct: 3569 GASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTD--RESVWTFGEGEY 3626

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDV 269
            GQLG+   R  +   PQ       + I  I      + AL+ EG +Y+ G    N   +V
Sbjct: 3627 GQLGLG--RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEV 3684

Query: 270  NC------PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            +       PQ +   S       A G+ H L LT +G+V   G    G L   + +    
Sbjct: 3685 DTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQRE 3744

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            P       +S+L G  + QI+AG  HSA  T
Sbjct: 3745 PC-----LISSLQGKGIRQISAGHNHSAAWT 3770



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 167/387 (43%), Gaps = 57/387 (14%)

Query: 35   KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            + ++WG G  GQL  +GRL   L P L   SS S    + CG      +        G V
Sbjct: 3408 EAYTWGGGRHGQLAESGRL--VLQPTLT--SSFSKAKQIHCGHNSTFVIEH-----DGTV 3458

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGD 152
             + G GS G+LG G   D    +P+T   G   T    S G   HS  ++++G +F+ GD
Sbjct: 3459 LACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGD 3518

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LGHG+      P ++ +   ++V  +ACG +HS ++  D    +++ FG+   G+
Sbjct: 3519 GDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVD---GKLFTFGASDLGR 3575

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWGR------GFNS 265
            LG+     +   LP     L  I +  I+   + +  ++ +   ++T+G       G   
Sbjct: 3576 LGLGNTSNK--KLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGR 3633

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH-HGMLSDPERVSSTRP 322
            T+    PQ +   S L+  +   G    L LT +G+V   G +  +G+     + +   P
Sbjct: 3634 TTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYP 3693

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                 ++V  L    +  IAAG EH+  +T                          +   
Sbjct: 3694 -----QQVMALSEQFIEDIAAGYEHALALT--------------------------KEGD 3722

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            + +WG    GQLGLG T  Q  P +++
Sbjct: 3723 VWSWGNDTDGQLGLGQTLPQREPCLIS 3749



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 143/306 (46%), Gaps = 39/306 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGK 92
           +++SWG G  G+LG G    + SP+L+ L  +    V  +A G  H  A+TS      G 
Sbjct: 489 RIYSWGDGDYGKLGHGNHVTQKSPKLI-LGPMQGKVVRQIAVGYRHSAAITSE-----GL 542

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCG 151
           +++WG G  G+LGHG+      P  V    G    +  +S G + +  +S D+  +++ G
Sbjct: 543 LYTWGDGDYGRLGHGDNHSRSIPTLVKDITG----VGSVSCGSSFTVVISQDATTVWSFG 598

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G  G+LGHGD      P  +S+     + ++ C  + SL L    +G QV+ +GSG   
Sbjct: 599 AGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTS--IG-QVFVWGSGPCL 655

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNSTSD 268
             G +     +  +P+      D++I+ I+   +   AL+ +  +Y+WG    G     +
Sbjct: 656 GYGQAD---ATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGN 712

Query: 269 VNCPQSLPSSLSFSQAALGW-NHVLVLTGDGEVLMLGGSHH----GMLSDPERVSSTRPL 323
            N P  LP  ++      G+ NHV+        + +G SH      + +D   V+S +P 
Sbjct: 713 NNSPVLLPRKVT------GFDNHVIY------QISVGTSHSIAWTALPTDRCIVTSYKPF 760

Query: 324 SVALEK 329
            + L++
Sbjct: 761 CIDLKE 766



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 11/163 (6%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVI 89
           Q    VWS+GAG +G+LG G       P+++ NL  L  +  + C     LALTS     
Sbjct: 589 QDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGL-LIRKVCCASQSSLALTSI---- 643

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G+VF WG G    LG+G+  DA +  P    +     I  I+ G NH   ++    +++
Sbjct: 644 -GQVFVWGSGPC--LGYGQ-ADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYS 699

Query: 150 CGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSL 191
            G+   GQ G G+  S    P KV+ F N  ++QI+ G  HS+
Sbjct: 700 WGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSI 742



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 122/301 (40%), Gaps = 55/301 (18%)

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            +T G G  GQL     R    P   SSF      QI CG   + V+  D     V   G 
Sbjct: 3410 YTWGGGRHGQLAESG-RLVLQPTLTSSF--SKAKQIHCGHNSTFVIEHD---GTVLACGE 3463

Query: 208  GKRGQLGV--SKD--RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
            G  G+LG   S D  R+R ++  Q   G    E+   +     S AL+  G +++WG G 
Sbjct: 3464 GSYGRLGQGNSDDLPRLRPITALQ---GFVVTELATSTGLEGHSLALTETGEVFSWGDGD 3520

Query: 263  FNSTSDVNCP-QSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
            +      N   Q  P  +           A G  H  ++T DG++   G S  G L    
Sbjct: 3521 YGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGN 3580

Query: 316  RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
              +   P      +V+ L  + V  IA GA H+ VVT                       
Sbjct: 3581 TSNKKLP-----AQVTALQPIMVELIACGANHTVVVT----------------------- 3612

Query: 376  VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
               +  ++ T+G GE+GQLGLG T  ++ P+ V   D F   + + ++ CG+ FT A+++
Sbjct: 3613 --TDRESVWTFGEGEYGQLGLGRTTAKMTPQYV---DAFSKLNIK-KICCGARFTLALTK 3666

Query: 436  H 436
             
Sbjct: 3667 E 3667


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 149/298 (50%), Gaps = 30/298 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG  + G+LG G   D   P+L++  +++SVS +ACG  H  A++     I G ++
Sbjct: 283 EIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVS-----ISGDLY 337

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK VT   +GH+  +  I+ G  H+  ++ +G LFT G
Sbjct: 338 TWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQ--VVSIACGAWHTALITSNGKLFTFG 395

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK----------DCLGNQ 201
           DGT G LGHGD  S + P ++         ++ACG+ H+  +++               +
Sbjct: 396 DGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKK 455

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
           ++ +G G + +LG +     +   P     L D   + ++     + AL+A GH++T   
Sbjct: 456 LFTWGDGDQYRLGHANK--ETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVFTMGS 513

Query: 259 --WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
             +G+  N TSD   P  +   L   +  + + G +HV VLT   E+   G   +G L
Sbjct: 514 KAYGQLGNPTSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGANGRL 571



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 186/429 (43%), Gaps = 76/429 (17%)

Query: 35  KVWSWGAGTDGQLGTGRLH--DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +VW+ G  +DG LG+      D L P+ L    +  V+ +  G +H+  +T       G+
Sbjct: 230 EVWAEGNSSDG-LGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTR-----QGE 283

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F+WG  S G+LGHG   D  Y KP         +++ ++ G  H+  VS SG L+T GD
Sbjct: 284 IFTWGEDSGGRLGHG--FDKDYGKPRLVDSLAITSVSFVACGEYHTCAVSISGDLYTWGD 341

Query: 153 GTF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           GT   G LGHG   SHS P +V+       V  IACG  H+ ++  +    +++ FG G 
Sbjct: 342 GTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSN---GKLFTFGDGT 398

Query: 210 RGQLGVSKDRIRSVSLPQ------------VTIGL-HDIEIVGISANGDRSAALSAEGHL 256
            G LG   DR  SV+ P+            V  G+ H   I+ ++     S+  S+   L
Sbjct: 399 LGVLG-HGDR-ESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKL 456

Query: 257 YTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           +TWG G           +     C  +L +  +F Q A G +  + LT  G V  +G   
Sbjct: 457 FTWGDGDQYRLGHANKETYLQPTCVAAL-ADYNFLQVACGHSLTVALTASGHVFTMGSKA 515

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
           +G L +P     T    V +     L G  V +I+ G  H AV+T +             
Sbjct: 516 YGQLGNP-----TSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSE----------- 559

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                          + TWG G +G+LG G+  DQ  P +V    E   ++    + CG+
Sbjct: 560 ---------------LYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKN----IACGA 600

Query: 428 GFTYAISRH 436
            FT  I  H
Sbjct: 601 NFTTCICIH 609


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 471 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 525

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 642

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 643 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 702

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 703 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 757

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 758 ACGPAQSFAWSSCSEW 773



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 506 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 560

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 620

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 677

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 678 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 419 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 467

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 468 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 523

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 524 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 582

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 583 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 613

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 614 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 665


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 165/382 (43%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E+   P+         V  + CG  H   L        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLE-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G +H+  ++D G +F+ G G+ G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--IIVALSCGESHTLALNDKGQVFSWGLGSDG 114

Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  ++      P  + S  +  V Q+ACG  HSL L K   G  ++ +G  + GQLG+
Sbjct: 115 QLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSK---GGHIFSWGQNRYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                +S+S+PQ    L  I    I+A G  S AL+  G ++ WGR      G N T+D 
Sbjct: 172 GMTG-QSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +  S      + G +H   LT +G V   G   +G L          P     
Sbjct: 231 CFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H+              +++TP            +  + ++G
Sbjct: 286 RKVFELMGNVVTQIACGRQHT--------------LAFTP-----------SSGKMDSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG  +TC++  P  V 
Sbjct: 321 LGGNGQLGTRSTCNRKSPAPVK 342



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 94/194 (48%), Gaps = 14/194 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSV--SMLACGGAHVLALTSPSSVIGGK 92
           ++SWG    GQLG G     +S PQ  +L SL  +  + +A GGAH  ALT     + G 
Sbjct: 158 IFSWGQNRYGQLGLGMTGQSISVPQ--HLQSLQGIPFAQIAAGGAHSFALT-----LSGA 210

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF WGR   GQLG  +  D  +P  +      R  + +IS G +H+  ++  G +FT G 
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRCFPALLKALRSQR--VIYISCGEDHTAALTKEGGVFTFGA 268

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH       +P KV   +   V QIACG +H+L         ++  FG G  GQ
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPS--SGKMDSFGLGGNGQ 326

Query: 213 LGVSKDRIRSVSLP 226
           LG      R    P
Sbjct: 327 LGTRSTCNRKSPAP 340



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 27/284 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +       +  L+CG +H LAL        G+VFS
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQIIVALSCGESHTLALNDK-----GQVFS 107

Query: 96  WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG GS GQLG     + +  P+ +         +  ++ G+ HS  +S  G +F+ G   
Sbjct: 108 WGLGSDGQLGLNNFEECIRVPRNIKSLSD--VQVAQVACGYWHSLALSKGGHIFSWGQNR 165

Query: 155 FGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G   +S S P  + S       QIA G  HS  L    L   V+G+G  K GQL
Sbjct: 166 YGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFAL---TLSGAVFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++    R    P +   L    ++ IS   D +AAL+ EG ++T+G       G NST+
Sbjct: 223 GLNDTNDR--CFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHVLVLT---GDGEVLMLGGS 306
               P+ +   +    +Q A G  H L  T   G  +   LGG+
Sbjct: 281 HEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGN 324



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V+SWG G+DGQLG     + +  P+  N+ SLS V +  +ACG  H LAL+      GG
Sbjct: 104 QVFSWGLGSDGQLGLNNFEECIRVPR--NIKSLSDVQVAQVACGYWHSLALSK-----GG 156

Query: 92  KVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            +FSWG+   GQLG G    ++  P+ +    G  +    I+AG  HS  ++ SG +F  
Sbjct: 157 HIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPF--AQIAAGGAHSFALTLSGAVFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + +  ++ V  I+CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 27/283 (9%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
           G H LALT        +V+SWG G  G+LGHG+      P  +    G    I  +  G 
Sbjct: 524 GKHYLALTKDY-----EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGK--DIIDVECGG 576

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            +S  +S +G L+T G G +G+LGHG      +P  +S+  ++++ ++ACG  ++  L  
Sbjct: 577 TYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL-- 634

Query: 196 DCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
            C+ +Q  VY +G G  G+LG  +       LP++   L +++IV +      S ALS +
Sbjct: 635 -CITSQGKVYSWGDGDYGKLG--RGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691

Query: 254 GHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           GH+YTWG+G        +  +V  P+ +           +LG +HVL LT  GEV   G 
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGK 751

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           + +  + D   +   +P       +  L G KV+ +  G   S
Sbjct: 752 NENKQICDSSELFVQQP-----RLIEALKGQKVVGVCCGPAQS 789



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 10/230 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G  G+LG G    +  P L+       +  + CGG +  A+++      G ++
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISA-----NGALY 589

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGRG+ G+LGHG   D L P  ++             + + H+  ++  G +++ GDG 
Sbjct: 590 TWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGD 649

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P  +    N  + Q+ CG + S+ L +D     VY +G G+  +LG
Sbjct: 650 YGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED---GHVYTWGKGEGWKLG 706

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
              +   +V  P++   L D ++VG+S       AL+ +G +Y WG+  N
Sbjct: 707 HPTE--ENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNEN 754



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)

Query: 150 CGDGT---FGQLGHGDYRSHSS----PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGN 200
           C D T     Q G   +  +SS    P ++++  +K V +IA     +H L L KD    
Sbjct: 478 CSDRTILILTQTGKVFFMYYSSDTQCPQEMTALDDKEVIKIAAHPEGKHYLALTKD---Y 534

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +VY +G+G  G+LG      +    P +   L   +I+ +   G  SAA+SA G LYTWG
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEE--PTLIQALKGKDIIDVECGGTYSAAISANGALYTWG 592

Query: 261 RG------FNSTSDVNCPQSLPSSLS---FSQAALG--WNHVLVLTGDGEVLMLGGSHHG 309
           RG        +  D   P ++ S+LS     + A G  + H L +T  G+V   G   +G
Sbjct: 593 RGNYGRLGHGTAEDCLTP-TMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYG 651

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            L       S  P  +  EK+ N   VK++Q+  GA+ S  ++   H
Sbjct: 652 KLGRGGSDGSKLPRLI--EKLQN---VKIVQVYCGAQFSVALSEDGH 693



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 84/222 (37%), Gaps = 50/222 (22%)

Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS-----SLS 280
           PQ    L ++ I  I  +      L+  G ++        +SD  CPQ + +      + 
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----MYYSSDTQCPQEMTALDDKEVIK 517

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
            +    G  H L LT D EV   G    G L   +  +   P       +  L G  +I 
Sbjct: 518 IAAHPEG-KHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEP-----TLIQALKGKDIID 571

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
           +  G  +SA ++                           N A+ TWG G +G+LG G   
Sbjct: 572 VECGGTYSAAISA--------------------------NGALYTWGRGNYGRLGHGTAE 605

Query: 401 DQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 441
           D + P +++ L DE       ++V CGS + + +   C+ SQ
Sbjct: 606 DCLTPTMISALSDEH-----IIKVACGSFYAHTL---CITSQ 639


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 166/393 (42%), Gaps = 59/393 (15%)

Query: 30  EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           ++    +++WGA   G LG G   +EL P+++       +  +ACG  H LA++     +
Sbjct: 369 KEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVS-----V 423

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G++FSWG G  G+LG   ++D   P  +  F+     IT +S    HS  V++SG L+ 
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFEN--VNITFVSCNELHSASVTESGELY- 480

Query: 150 CGDGTFGQLG-HGDY----RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
               TFG+ G H  Y    R  + P KV       +  ++CG+  ++ L  +    ++Y 
Sbjct: 481 ----TFGRSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSE---GELYS 533

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           FG    GQLG        +  P +   L+ + I  +S       A++  G ++ WG    
Sbjct: 534 FGKNDCGQLGAG--HFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEF 591

Query: 262 ---GFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
              G +     + P   PS+           G +H +VL+  G V + G    G L    
Sbjct: 592 GQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVA- 650

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
            V+ T P       +S  +  K+ ++  G EH+A VT                       
Sbjct: 651 -VNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVT----------------------- 686

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              E+  + TWG G  G+LG G+  D+  P +V
Sbjct: 687 ---ESGCLYTWGNGSRGRLGHGDHQDRYVPTLV 716



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 79/161 (49%), Gaps = 15/161 (9%)

Query: 36  VWSWGAGTDGQLGTGRL--HD---ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           VW WG+   GQLGT +L  HD   E      N      +  + CGG+H + L+       
Sbjct: 583 VWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWN----EEIQDIKCGGSHTVVLSCT----- 633

Query: 91  GKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G V+ +G G SGQLG      + Y   P      +   I  +  G  H+  V++SGCL+T
Sbjct: 634 GVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYT 693

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
            G+G+ G+LGHGD++    P  V S   K V  IACG  H+
Sbjct: 694 WGNGSRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHT 734



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 24/249 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++S+G    GQLG G  +D   P L+   +   +S ++CG  HV A+T     + G V+
Sbjct: 530 ELYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVT-----VNGDVW 584

Query: 95  SWGRGSSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WG    GQLG  ++   D  +  P TF++     I  I  G +H+  +S +G ++  G+
Sbjct: 585 LWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEE---IQDIKCGGSHTVVLSCTGVVYVFGN 641

Query: 153 GTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSG 208
           G  GQLG    ++    ++P  +S   N  + ++ CG+ H+  + +  CL    Y +G+G
Sbjct: 642 GQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCL----YTWGNG 697

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
            RG+LG    + R V  P +   L   ++  I+     +AA      +  W     + S 
Sbjct: 698 SRGRLGHGDHQDRYV--PTLVESLAYKQVQSIACGAYHTAACV----IRAWVHDQETKSC 751

Query: 269 VNCPQSLPS 277
           + C Q   +
Sbjct: 752 MACKQRFTT 760


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 442 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 496

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 497 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 556

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 557 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 613

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 614 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 673

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 674 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 728

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 729 ACGPAQSFAWSSCSEW 744



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 477 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 531

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 532 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 591

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 592 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 648

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 649 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 696



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 390 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 438

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 439 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 494

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 495 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 553

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 554 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 584

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 585 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 636


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 157/331 (47%), Gaps = 30/331 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
            K+++ G  T+G+LG G     +  P+ ++  S   V  +A   GG H +ALT     + G
Sbjct: 2974 KIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALT-----VDG 3028

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            KVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L++ G
Sbjct: 3029 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSWG 3086

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGK 209
             G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G 
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDGD 3143

Query: 210  RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNS 265
             G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G       
Sbjct: 3144 FGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3201

Query: 266  TSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
             +DV+   PQ +           A+G  H L +T  G+V   G + HG   +     + +
Sbjct: 3202 GTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3261

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            P       V  L+G K+ ++A G+ HS   T
Sbjct: 3262 P-----TLVQGLEGQKITRVACGSSHSVAWT 3287



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 20/257 (7%)

Query: 56  LSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           L+P L++ LSS   V + A   G H LAL++      G+V+SWG G  G+LGHG+     
Sbjct: 433 LAPMLIHGLSSRKIVKLAAHPDGQHFLALST-----SGEVYSWGCGDGGRLGHGDATYLE 487

Query: 114 YPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
            P  +T F G +    +  I+ G  +S  V+  G L+T G G +G+LGHG     ++P+ 
Sbjct: 488 EPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPML 547

Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
           V++   + V  +ACG   +  L     G QV+ +G G  G+LG  +        P++   
Sbjct: 548 VTALKGQKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLVEK 604

Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSFSQ 283
           L D++IV +      S AL+ +G +YTWG+G N      +   V  P+ L S        
Sbjct: 605 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD 664

Query: 284 AALGWNHVLVLTGDGEV 300
            A+G  H L LT +GEV
Sbjct: 665 IAVGSTHCLALTDEGEV 681



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G++F
Sbjct: 4002 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 4056

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4057 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4116

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4117 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4173

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4174 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4217



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 3990 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 4042

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ SG LFT G G +G+LGHGD      P  V +     V  +ACG     +L 
Sbjct: 4043 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 4102

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4103 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4157

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4158 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4217

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4218 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4256



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P L+       +   V  +ACG  +  A+T+      
Sbjct: 466 EVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTA-----D 520

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G +++ 
Sbjct: 521 GELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSW 580

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  V    + ++ ++ CG + S+ L KD    QVY +G G  
Sbjct: 581 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 637

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   D    V  P++   L   ++V I+       AL+ EG +++WG
Sbjct: 638 QRLGHGTD--EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4109 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4163

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4164 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4221

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4222 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4257



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG +   +++  +  +    L  ++++G    G+++  A++A+G LY  
Sbjct: 3897 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3952

Query: 260  G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G       G   T  V+ P  L S   +   + A+  G  H L L+ +GEV   G +  G
Sbjct: 3953 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4012

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R    RP       + +L GV+V+ IAAG  HSA +T                 
Sbjct: 4013 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITA---------------- 4051

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                      +  + TWG G +G+LG G++ DQ+ PK+V   D  Q     ++V CGSG
Sbjct: 4052 ----------SGELFTWGKGRYGRLGHGDSEDQLKPKLV---DALQGHRV-IDVACGSG 4096



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3952

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3953 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4009

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  +E+V I+A G  SA ++A G L+TWG+G     
Sbjct: 4010 EDGKLGHGN---RSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 4066

Query: 264  -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +  S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 4067 GHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD 4126

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4127 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4181

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4182 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4241

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4242 QGKKINR-----VACGSAHTLAWS 4260



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G LG   Y +   P+   +  +  V QI C  +  L+L +           SG      
Sbjct: 379 WGLLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSR-----------SG-----A 422

Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNST---SD 268
           V     +S +L P +  GL   +IV ++A  +G    ALS  G +Y+WG G        D
Sbjct: 423 VYTQNYKSTTLAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD 482

Query: 269 VNCPQSLPSSLSFS---------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
               +      +FS         Q A G  +   +T DGE+   G  ++G L        
Sbjct: 483 ATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDV 542

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
           T P+      V+ L G KV+ +A G+  +  +                         + E
Sbjct: 543 TTPM-----LVTALKGQKVVDVACGSGDAQTL------------------------AVTE 573

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK+V   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLV---EKLQDLDI-VKVCCGSQFSVALTK 625



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2919 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 2976

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  +  P+ +   S+    + A+  G  H + LT DG+V   G  
Sbjct: 2977 ACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3036

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3037 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITS------------- 3078

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + +WG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3079 -------------SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRV------IQVA 3119

Query: 425  CGS 427
            CGS
Sbjct: 3120 CGS 3122



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 49/247 (19%)

Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYT 258
           +VY +G G  G+LG      +   +L     G     ++V I+     SAA++A+G LYT
Sbjct: 466 EVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYT 525

Query: 259 WGRG------FNSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSH 307
           WGRG        S+ DV  P  L ++L   +        G    L +T +G+V   G   
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPM-LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGD 584

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
           +G L          P  V  EK+ +LD   ++++  G++ S  +T               
Sbjct: 585 YGKLGRGGSDGCKTPKLV--EKLQDLD---IVKVCCGSQFSVALT--------------- 624

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                      ++  + TWG G++ +LG G      +PK++   D  Q +   +++  GS
Sbjct: 625 -----------KDGQVYTWGKGDNQRLGHGTDEHVRYPKLL---DSLQGKKV-VDIAVGS 669

Query: 428 GFTYAIS 434
               A++
Sbjct: 670 THCLALT 676



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 4212 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKM 4270


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 158/338 (46%), Gaps = 31/338 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           K+++WG G  G+LG G      +P+   + +L+++ M  + CGG   +AL   S   G  
Sbjct: 149 KLFTWGEGQYGRLGHGDEESISTPK--QVVALANIPMKYVFCGGRSTIAL---SHTAGSG 203

Query: 93  VFSWGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +++WG    GQLG G+  D     P+ V      R  +  + AG + +  +  SG LFT 
Sbjct: 204 LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKR--LVALDAGASRAAVIDSSGALFTW 261

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G  G+LGHGD  +   P  VSS     V  +A G  HSL L K     +++ +G G+ 
Sbjct: 262 GRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTK---AGELFSWGRGEN 318

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNSTS 267
           GQLG    + + ++  Q+   +   +I+GISA G  S A   +G +Y WG    G   T 
Sbjct: 319 GQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTG 378

Query: 268 D-----VNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
           D     +N PQ   +P  + F   + G+ H + LT D  +   G    G L      +  
Sbjct: 379 DSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQC 438

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            P++       N+   + +  +AG E S +V GK + V
Sbjct: 439 APIAC------NIPNYQPVVFSAG-EISTIVIGKKNTV 469



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 51/313 (16%)

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
           GS+      +    LYP+           I  ++AG  H   +S SG LFT G+G +G+L
Sbjct: 111 GSNNNNDDDKYFTKLYPEE---------RIILVNAGAAHIAMISQSGKLFTWGEGQYGRL 161

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           GHGD  S S+P +V +  N  +  + CG R S + L    G+ +Y +G+ + GQLG    
Sbjct: 162 GHGDEESISTPKQVVALANIPMKYVFCGGR-STIALSHTAGSGLYTWGNNEFGQLGRGDC 220

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCP 272
                 LP+         +V + A   R+A + + G L+TWGRG +       T +   P
Sbjct: 221 GDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQP 280

Query: 273 QSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
            +L SSL        ALG  H L LT  GE+   G   +G L       S +   +A ++
Sbjct: 281 -TLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGH----GSYQSQQLAPKQ 335

Query: 330 VS-NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +   +D  K+I I+AG  HS                              ++ ++  WG 
Sbjct: 336 LQFFVDMPKIIGISAGGYHSVAQ--------------------------LDDGSVYAWGM 369

Query: 389 GEHGQLGLGNTCD 401
            ++G LG G++ D
Sbjct: 370 SDYGILGTGDSDD 382


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 166/414 (40%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG G  G+LG     D  SP++++  +   V  +ACG  H  ALT       G+V+
Sbjct: 324 EVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTVACGEYHTCALTD-----SGEVY 378

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG     +  L  G       P+ +    DG   +I+ ++ G  H+  VS  G LFT G
Sbjct: 379 TWGNDVCCADLLNEGRTRSQWIPQRLGGPLDG--ISISSVACGEWHTAIVSSCGRLFTYG 436

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD RS+SSP +V S     V   ACG  H+  +++                
Sbjct: 437 DGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVE---------------- 480

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------F 263
              V  DR R                             SA G L+TWG G         
Sbjct: 481 ---VMFDRFRYN---------------------------SASGKLFTWGDGDEGRLGHVD 510

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           N    V    +      F Q + G    + LT  G+V  +G + +G L +P      R  
Sbjct: 511 NGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPH----ARDK 566

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            V +E     + VKVI            TG +H                 + V+    ++
Sbjct: 567 VVIVEGQLKQEFVKVIS-----------TGSYH-----------------VAVLTSAGSV 598

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            TWG GE GQLGLG+T D+  P  V        RD Q+  + CG  FT AI  H
Sbjct: 599 YTWGRGEIGQLGLGDTEDRYTPCFVEA-----LRDRQVNTITCGPSFTAAICLH 647


>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 380

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 190/432 (43%), Gaps = 88/432 (20%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           GA + GQLG G + D  +P+L + + L   +V ++A GG H   +T       G+VF  G
Sbjct: 1   GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGD-----GEVFVCG 55

Query: 98  RGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +   GQLG G + D  AL   P        +T+T+++ GW+ + F++DSG + +CG   F
Sbjct: 56  QNHRGQLGLGHLADISALQRCPSLT-----HTVTNVTCGWDFTLFLTDSGRVLSCGSNAF 110

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   + ++ V+V   +   V  +A G+RH+L +       +VY +G   RG L  
Sbjct: 111 GQLGIGQKPNFTAEVQVVESLKAAVVSVAAGLRHALAVTDS---GRVYQWG---RGLLSQ 164

Query: 216 SKDRIRSVSLP--------QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           +K  +   S+P            GL       ++A       L+ +G L+ WG   +   
Sbjct: 165 AKRTLGPSSVPPHLGSTVPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQL 224

Query: 268 DVNCPQSLPSSLSFSQAALG----------WNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               P  L S++   ++ LG          W H++  T  G V   G  ++G L  P   
Sbjct: 225 VSRDP-FLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPAPT 283

Query: 318 SSTRPLSVALEKVSNLDG-----VKVIQ----IAAGAEHS-AVVTGKFHWVRLFIISYTP 367
           S + P S +    +NL+      VK +Q    IA G+EH+ A++ G+             
Sbjct: 284 SRS-PESRSTTDGANLEAGLPAEVKALQGATQIACGSEHNLAILAGR------------- 329

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                          +++WGW EHG  G G+  D   P++V            L + CG+
Sbjct: 330 ---------------LLSWGWNEHGMCGDGSHTDVRQPQLVPA-------LRPLLIGCGA 367

Query: 428 GFTYAISRHCLP 439
           G + A+   C P
Sbjct: 368 GHSMAV---CAP 376


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 471 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 525

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 642

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 643 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 702

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 703 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 757

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 758 ACGPAQSFAWSSCSEW 773



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 506 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 560

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 620

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 677

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 678 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 419 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 467

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 468 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 523

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 524 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 582

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 583 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 613

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 614 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 665


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           K++SWG+ +DGQLG G  + +E+ P+L++  +   ++ + CGG H +A++       G V
Sbjct: 234 KLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISK-----SGAV 288

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  +  +   P+ +      +  + + + G   S F++  G +FTCG G
Sbjct: 289 FGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAK--VCYAACGEEFSVFLTVDGGVFTCGAG 346

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG+  +   P +V   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 347 MYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPS--RGRVYAWGLGGAGQL 404

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G   +  RSV+ PQV  G
Sbjct: 405 G--NNITRSVATPQVVHG 420



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 171/418 (40%), Gaps = 56/418 (13%)

Query: 2   VAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQ 59
           + P+       K  L    +P I  E        ++ WG+   G+LG G + DE  L P+
Sbjct: 46  IIPIKNANRNKKRRLA--CEPIIAVEYSTVTDKNMFCWGSTIHGELGLGGIEDENILVPR 103

Query: 60  LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
            L+    + +  +ACG  + + +T       G+V+S G    GQLGH +    L   P  
Sbjct: 104 ELDFQKATEIEQIACGENYTVLITR-----DGQVYSCGNNDYGQLGHEKGRKRLQLIP-- 156

Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNK 178
                 +    ++ G +H+  V++ G LF+ G    GQLG +        P  V +    
Sbjct: 157 --GLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTS 214

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            V Q+ACG+ H L L  +    ++Y +GS   GQLG+  D +++   P++   L  + I 
Sbjct: 215 VVVQVACGINHVLALTNN---GKLYSWGSNSDGQLGLGTD-VKNEIKPKLISSLAGVPIA 270

Query: 239 GISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNH 290
            I+  G  S A+S  G ++ WG+      G N T + N P+ L +  +     AA G   
Sbjct: 271 FITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEF 330

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            + LT DG V   G   +G L      +   P      +V  L G  V QI+ G  H+  
Sbjct: 331 SVFLTVDGGVFTCGAGMYGQLGHGNTSNEILP-----RQVMELMGSTVTQISCGKRHT-- 383

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                  + ++     +  WG G  GQLG   T     P+VV
Sbjct: 384 -----------------------LGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVV 418


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 154/364 (42%), Gaps = 28/364 (7%)

Query: 4   PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
           P + E+   K  L   A P+ +         +V+SWG G  G+LG G  +     Q +  
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKV-- 237

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
             L  V      G H +ALTS      G+V+SWG G  G+LGHG+      P  V    G
Sbjct: 238 --LVIVYPYHPEGKHYMALTSE-----GEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSG 290

Query: 124 HRYT--ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
            +    + HI  G  +S  ++  G LFT G G +G+LGHG      +P  V S   + V 
Sbjct: 291 KQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVI 350

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
            I CG   +  L     G  V+ +G G  G+LG  +        P++   L   +IV + 
Sbjct: 351 DICCGSGDAQTLAVTDDGT-VWSWGDGDYGKLG--RGGSDGCKTPKIIDRLQGQDIVRVC 407

Query: 242 ANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLV 293
                S AL+  GH++TWG+G        +   +  P+ L           A+G  H LV
Sbjct: 408 CGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLV 467

Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           +T +GEV   G +  G L D    + + P       +  LDG  +  IA G   S   T 
Sbjct: 468 MTEEGEVYGWGRNDQGQLGDSSFSTKSDP------TLMPLDGKSISGIACGPAQSFCWTS 521

Query: 354 KFHW 357
             HW
Sbjct: 522 TGHW 525


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 767 ACGPAQSFAWSSCSEW 782



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA-----E 569

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 477 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 622

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 123/230 (53%), Gaps = 17/230 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++S+GAG+DGQLGTG      SPQL+NL       +L+ G  H  ALT+      G ++
Sbjct: 108 RLYSFGAGSDGQLGTGDAQCATSPQLINLPE-QKYKLLSAGTDHSAALTTD-----GTLY 161

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG GS GQLG G       PK + F      +++ +S G+ H+  V+D G L+T G+  
Sbjct: 162 MWGSGSEGQLGLGNTDSVETPKELKF----HSSVSWVSCGYYHTAIVTDDGKLYTFGEKE 217

Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           FG+LG         ++P  V S   K +  +ACG  H+ V+    +GN +Y FG G  GQ
Sbjct: 218 FGKLGLTEDQLEDTTTPKHVESITEK-IKLVACGGAHTAVISD--VGN-LYTFGDGMHGQ 273

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           LG     ++ +SLPQ    L + +   +S   + +A ++ +G +YT+G G
Sbjct: 274 LGNGPSLLQ-LSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDG 322



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 154/303 (50%), Gaps = 25/303 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++++G+   GQLG G +     P  +       V+++ACG +H +  T       G+++
Sbjct: 56  RLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTK-----AGRLY 110

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G GS GQLG G+   A  P+ +   +  +Y +  +SAG +HS  ++  G L+  G G+
Sbjct: 111 SFGAGSDGQLGTGDAQCATSPQLINLPE-QKYKL--LSAGTDHSAALTTDGTLYMWGSGS 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G+  S  +P ++    + +V  ++CG  H+ ++  D    ++Y FG  + G+LG
Sbjct: 168 EGQLGLGNTDSVETPKELK--FHSSVSWVSCGYYHTAIVTDD---GKLYTFGEKEFGKLG 222

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STS 267
           +++D++   + P+    + + +I  ++  G  +A +S  G+LYT+G G +       S  
Sbjct: 223 LTEDQLEDTTTPKHVESITE-KIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLL 281

Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRPL 323
            ++ PQ +   S       + G NH  V+T  G +   G   HG L  S+ +  +  +P 
Sbjct: 282 QLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEEDFCNIFKPC 341

Query: 324 SVA 326
            V+
Sbjct: 342 KVS 344



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 144/315 (45%), Gaps = 51/315 (16%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           HIS G  HS  +++SG L+T G   +GQLG G  +  + P  V S   + V+ +ACG  H
Sbjct: 40  HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSH 99

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           ++V  K     ++Y FG+G  GQLG      +  + PQ+ I L + +   +SA  D SAA
Sbjct: 100 TIVCTK---AGRLYSFGAGSDGQLGTGD--AQCATSPQL-INLPEQKYKLLSAGTDHSAA 153

Query: 250 LSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G LY WG G        +T  V  P+ L    S S  + G+ H  ++T DG++   
Sbjct: 154 LTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTF 213

Query: 304 GGSHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
           G    G L  ++ +   +T P  V  E ++     K+  +A G  H+AV           
Sbjct: 214 GEKEFGKLGLTEDQLEDTTTPKHV--ESITE----KIKLVACGGAHTAV----------- 256

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQ 420
                          I++   + T+G G HGQLG G +  Q+  P+ V    E + +   
Sbjct: 257 ---------------ISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCK--- 298

Query: 421 LEVFCGSGFTYAISR 435
             V CG   T  I+ 
Sbjct: 299 -YVSCGDNHTAVITE 312



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 13/152 (8%)

Query: 35  KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           K++++G    G+LG    +L D  +P+ +  S    + ++ACGGAH   ++       G 
Sbjct: 209 KLYTFGEKEFGKLGLTEDQLEDTTTPKHVE-SITEKIKLVACGGAHTAVISDV-----GN 262

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           ++++G G  GQLG+G  ++    P+ V     H+    ++S G NH+  +++ G ++T G
Sbjct: 263 LYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHK--CKYVSCGDNHTAVITEKGAMYTFG 320

Query: 152 DGTFGQLG--HGDYRSHSSPVKVSSFVNKNVH 181
           DG  G+LG    D+ +   P KVS F + +V 
Sbjct: 321 DGRHGKLGISEEDFCNIFKPCKVSRFTSFDVQ 352


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 149/315 (47%), Gaps = 46/315 (14%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           + ++S G  HS  V+ +G L+T G   +GQLGHG+ +S++ P  V     + V+ +ACG 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H++   +      +Y FG G  GQLG          +P++  GL   +   ++   D S
Sbjct: 97  NHTIAATES---GHLYSFGCGGDGQLG--HGDAEDSHVPKIIEGLDVQKYKHLACGSDFS 151

Query: 248 AALSAEGHLYTW---GRGFNST-SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           AA++  G LYTW   G G N    D   P  L         + G+ H+ V+T DG + M 
Sbjct: 152 AAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMC 211

Query: 304 GGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
           G    G L  D E++ +T      L+K+ +++  +V+  A GAE +AVVT          
Sbjct: 212 GEKEGGKLGLDHEQLDNTSQ----LQKIKSIED-QVVVAACGAEFTAVVT---------- 256

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQL 421
                           +N ++ T+G G  GQLGLG++  +   P+ + L ++ + R    
Sbjct: 257 ----------------KNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKAR---- 296

Query: 422 EVFCGSGFTYAISRH 436
            V CG  FT  I++H
Sbjct: 297 TVSCGESFTAVITKH 311



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 27/326 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++++G    GQLG G       P ++       V M+ACG  H +A T       G ++
Sbjct: 55  KLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATES-----GHLY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G G  GQLGHG+  D+  PK +   D  +Y   H++ G + S  ++++G L+T G   
Sbjct: 110 SFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKY--KHLACGSDFSAAITENGELYTWGSCG 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ G G+     + +     ++  V  ++CG  H  V+ +D     +Y  G  + G+LG
Sbjct: 168 EGQNGLGE----DTEIPTRLHLHGKVRMVSCGYYHMAVVTED---GSLYMCGEKEGGKLG 220

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTS 267
           +  +++ + S  Q    + D ++V  +   + +A ++  G +YT+G+G        +S  
Sbjct: 221 LDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMM 279

Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           +   P+ +P    +     + G +   V+T  G +   G   HG L   +   S    + 
Sbjct: 280 ETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSN---TF 336

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVV 351
             EKV   +   V  +  G  H  V 
Sbjct: 337 KPEKVKRFNNFTVKMVTCGGCHMLVA 362


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG+ + GQLG G   +++  P L+   +   ++ +ACGG H  A++       G +
Sbjct: 162 ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK-----SGAI 216

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  ++    YP  +         + +IS G + S F+++ G +FTCG G
Sbjct: 217 FGWGKNTFGQLGLNDLNSRCYPTQLRTL--RSLGVRYISCGDDFSVFLTNEGGVFTCGAG 274

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           TFGQLGHG   +   P KV   +   + QIACG RH+L  +      ++YGFG G  GQL
Sbjct: 275 TFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPS--RGKIYGFGLGGVGQL 332

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G+    + + S PQ+  G
Sbjct: 333 GIG--MVGNHSTPQIVRG 348



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 166/387 (42%), Gaps = 53/387 (13%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + ++ WG    G+LG G + +E  + P+ ++ S    V  + CG +H L LT       G
Sbjct: 1   MAIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE-----G 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           K+++ G    GQLGH   +D L  K P        Y IT IS G  HS  +++ G +F+ 
Sbjct: 56  KMYACGNNDHGQLGHD--LDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSW 113

Query: 151 GDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           G    GQLGH  +     +P  + +   K+V QIA G  H L L  +    ++Y +GS  
Sbjct: 114 GSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNN---GELYAWGSNS 170

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG+       V +P +   L  + I  I+  G+ S A+S  G ++ WG+      G 
Sbjct: 171 YGQLGIGTTS-EKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N  +    P  L +  SL     + G +  + LT +G V   G    G L      +   
Sbjct: 230 NDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV 289

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P      KV  L G K+ QIA G  H+              +++ P              
Sbjct: 290 P-----RKVFELMGSKITQIACGRRHT--------------LAFVP-----------SRG 319

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            I  +G G  GQLG+G   +   P++V
Sbjct: 320 KIYGFGLGGVGQLGIGMVGNHSTPQIV 346



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 117/295 (39%), Gaps = 66/295 (22%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           ++  G+   G+LG G         P K+       V ++ CG  H+L L K+    ++Y 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE---GKMYA 59

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
            G+   GQLG   D + +   PQ    L +  I  IS     S AL+  G +++WG   N
Sbjct: 60  CGNNDHGQLGHDLDTLPN-KRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS--N 116

Query: 265 STSDV-----NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGML-- 311
           +   +     N  Q  P  +         Q A G  H L LT +GE+   G + +G L  
Sbjct: 117 AVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGI 176

Query: 312 -SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
            +  E+V    P+   ++   +L GV +  IA G  HS  V+                  
Sbjct: 177 GTTSEKV----PMPTLIQ---SLAGVPIAFIACGGNHSFAVS------------------ 211

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-----------KVVNLGDEF 414
                   ++ AI  WG    GQLGL +   + +P           + ++ GD+F
Sbjct: 212 --------KSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDF 258


>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
           2-like [Saccoglossus kowalevskii]
          Length = 1049

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 178/403 (44%), Gaps = 75/403 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++SWGA + GQLG G   D+  P+ +       +  +  GG H L LT       G ++S
Sbjct: 27  MFSWGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTD-----CGAIYS 81

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            G  S GQLG G   +    K +     H   +  ++ GW+    +++ G L+  G   F
Sbjct: 82  CGWNSKGQLGLGHTDNLSVFKRI----DHLPPVIKVTCGWDFCLAITEVGDLYAWGCNVF 137

Query: 156 GQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG  +  S ++ P K+  F ++NV  IA G+RHSL +  D    +++ +GS ++GQLG
Sbjct: 138 GQLGIPEIDSFTAIPTKIQIF-SRNVTSIAAGLRHSLAVTND---GKLWSWGSARKGQLG 193

Query: 215 VSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWG------------- 260
             + +     L +V   +H +E I  +S+    S AL+A G++Y WG             
Sbjct: 194 NDQSKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTACGNMYLWGSNKHNQLTNSVQG 253

Query: 261 ---RGFNSTSDV-NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML- 311
               G +S  D+   P  L   L   +  L    GW H+L +T D  V   G + +  L 
Sbjct: 254 VVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLG 313

Query: 312 -----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
                ++  +   T+P  + + K        + QIA G+EH+                  
Sbjct: 314 ISLTGNNCAKKDVTKPKELVILK-------DIKQIACGSEHNL----------------- 349

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                     ++++  ++ WGW EHG  G G   + + P+V++
Sbjct: 350 ---------ALSDDNKVLAWGWNEHGSCGNGKEENVLTPQVID 383



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 36/220 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL-----NLSSLSSVSMLACGGAHVLALTSPSSVI 89
           K+WSWG+   GQLG  +   +   QLL      +  L ++S ++ G  H  ALT+     
Sbjct: 180 KLWSWGSARKGQLGNDQ--SKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTA----- 232

Query: 90  GGKVFSWGRGSSGQLGH---------GEMVDALYPKP----VTFFDGHRYTITHISAGWN 136
            G ++ WG     QL +         G   + + P P    +  F G +    H  +GW 
Sbjct: 233 CGNMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVH--SGWT 290

Query: 137 HSGFVSDSGCLFTCGDGTFGQLG---HGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLV 192
           H   ++    +F  G   + QLG    G+  +     K    V  K++ QIACG  H+L 
Sbjct: 291 HILAITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKDIKQIACGSEHNLA 350

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
           L  D   N+V  +G  + G  G  K+   +V  PQV   L
Sbjct: 351 LSDD---NKVLAWGWNEHGSCGNGKE--ENVLTPQVIDDL 385



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 38/252 (15%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V  +++WG    GQLG   +    + P  + + S  +V+ +A G  H LA+T+      
Sbjct: 125 EVGDLYAWGCNVFGQLGIPEIDSFTAIPTKIQIFS-RNVTSIAAGLRHSLAVTN-----D 178

Query: 91  GKVFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           GK++SWG    GQLG+     G  +    PK V   +     I+ +S+G  HS  ++  G
Sbjct: 179 GKLWSWGSARKGQLGNDQSKTGYQLLQRVPKQVHKLEN----ISSVSSGSYHSTALTACG 234

Query: 146 CLFTCGDGTFGQLGH---------GDYRSHSSPV----KVSSFVNKNVHQIACGMRHSLV 192
            ++  G     QL +         G  +    PV     +  F  + +  +  G  H L 
Sbjct: 235 NMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILA 294

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVS----KDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           +  D   + V+G+G     QLG+S        + V+ P+  + L DI+   I+   + + 
Sbjct: 295 ITHD---SNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKDIK--QIACGSEHNL 349

Query: 249 ALSAEGHLYTWG 260
           ALS +  +  WG
Sbjct: 350 ALSDDNKVLAWG 361



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 13/163 (7%)

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
           CL   ++ +G+   GQLG+     +S   P+  + + D +IV ++  G  +  L+  G +
Sbjct: 22  CLQRGMFSWGANSYGQLGLGHQDDKSK--PEKILKIPDGKIVDVTGGGGHTLLLTDCGAI 79

Query: 257 YTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           Y+ G       G   T +++  + +       +   GW+  L +T  G++   G +  G 
Sbjct: 80  YSCGWNSKGQLGLGHTDNLSVFKRIDHLPPVIKVTCGWDFCLAITEVGDLYAWGCNVFGQ 139

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           L  PE + S   +   ++  S      V  IAAG  HS  VT 
Sbjct: 140 LGIPE-IDSFTAIPTKIQIFSR----NVTSIAAGLRHSLAVTN 177



 Score = 42.0 bits (97), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 17/147 (11%)

Query: 58  PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLG------HGEM 109
           P  LNL       +LA   G  H+LA+T  S+V     F WGR    QLG      +   
Sbjct: 269 PTKLNLELFGGRQILAVHSGWTHILAITHDSNV-----FGWGRNDYSQLGISLTGNNCAK 323

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
            D   PK +         I  I+ G  H+  +SD   +   G    G  G+G   +  +P
Sbjct: 324 KDVTKPKELVILKD----IKQIACGSEHNLALSDDNKVLAWGWNEHGSCGNGKEENVLTP 379

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKD 196
             +     + +  I     H   L KD
Sbjct: 380 QVIDDLAKEKIRLIDKFTTHRYYLRKD 406


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG+ + GQLG G   +++  P L+   +   ++ +ACGG H  A++       G +
Sbjct: 167 ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK-----SGAI 221

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ + GQLG  ++    YP  +         + +IS G + S F+++ G +FTCG G
Sbjct: 222 FGWGKNTFGQLGLNDLNSRCYPTQLRTL--RSLGVRYISCGDDFSVFLTNEGGVFTCGAG 279

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           TFGQLGHG   +   P KV   +   + QIACG RH+L  +      ++YGFG G  GQL
Sbjct: 280 TFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPS--RGKIYGFGLGGVGQL 337

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G+    + + S PQ+  G
Sbjct: 338 GIG--MVGNHSTPQIVRG 353



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 166/392 (42%), Gaps = 58/392 (14%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + ++ WG    G+LG G + +E  + P+ ++ S    V  + CG +H L LT       G
Sbjct: 1   MAIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE-----G 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR------YTITHISAGWNHSGFVSDSG 145
           K+++ G    GQLGH   +D L  K        R      Y IT IS G  HS  +++ G
Sbjct: 56  KMYACGNNDHGQLGHD--LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWG 113

Query: 146 CLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            +F+ G    GQLGH  +     +P  + +   K+V QIA G  H L L  +    ++Y 
Sbjct: 114 QVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNN---GELYA 170

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           +GS   GQLG+       V +P +   L  + I  I+  G+ S A+S  G ++ WG+   
Sbjct: 171 WGSNSYGQLGIGTTS-EKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTF 229

Query: 262 ---GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
              G N  +    P  L +  SL     + G +  + LT +G V   G    G L     
Sbjct: 230 GQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 289

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
            +   P      KV  L G K+ QIA G  H+              +++ P         
Sbjct: 290 SNEIVP-----RKVFELMGSKITQIACGRRHT--------------LAFVP--------- 321

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                 I  +G G  GQLG+G   +   P++V
Sbjct: 322 --SRGKIYGFGLGGVGQLGIGMVGNHSTPQIV 351



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 118/300 (39%), Gaps = 71/300 (23%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           ++  G+   G+LG G         P K+       V ++ CG  H+L L K+    ++Y 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE---GKMYA 59

Query: 205 FGSGKRGQLGVSKD-----RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            G+   GQLG   D     R R     ++T  L +  I  IS     S AL+  G +++W
Sbjct: 60  CGNNDHGQLGHDLDTLPNKRPRMSRFKRLT-SLENYIITCISCGTAHSLALTNWGQVFSW 118

Query: 260 GRGFNSTSDV-----NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           G   N+   +     N  Q  P  +         Q A G  H L LT +GE+   G + +
Sbjct: 119 GS--NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSY 176

Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
           G L   +  E+V    P+   ++   +L GV +  IA G  HS  V+             
Sbjct: 177 GQLGIGTTSEKV----PMPTLIQ---SLAGVPIAFIACGGNHSFAVS------------- 216

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-----------KVVNLGDEF 414
                        ++ AI  WG    GQLGL +   + +P           + ++ GD+F
Sbjct: 217 -------------KSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDF 263


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 162/382 (42%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + QIACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             + ++S S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 91/183 (49%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQLG G  L  + +PQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 23/300 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG     + +   P          I  I+ G+ HS  +S    +F+ G    
Sbjct: 108 WGLDTDGQLGLPGTEEYI-KVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G + +S S+P  + S +     Q+A G  HS VL    L   ++G+G  K GQLG
Sbjct: 167 GQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           ++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS 
Sbjct: 224 LNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 269 VNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
              P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +V
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SL+ + +  +ACG  H LAL+      G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIKVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E+     P+ +    G  +    ++AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 376 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 430

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+S  G LGHG  V    PK V    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 431 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 488

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 489 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 548

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      R V  P     L +     I+     + AL+  GH+YT    
Sbjct: 549 FTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSP 606

Query: 259 -WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +G+  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 607 VYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 663



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 149/378 (39%), Gaps = 63/378 (16%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +D L PKP+ F    +  + +IS G  H+  V+  G +++ G+ + G+LGHG     
Sbjct: 339 GVNMDCLIPKPLEF--AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 396

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
             P  + +  N N+  +ACG  H+  +    L   +Y +G+G    G LG   +    V 
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAVT---LSGDLYTWGNGTSNSGLLGHGNEVSHWVP 453

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS- 277
             +V   L  I +  IS     +A +++ G L+T+G       G      ++ P+ + S 
Sbjct: 454 -KRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL 512

Query: 278 -SLSFSQAALGWNH----VLVLTG--------DGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             L   +AA G  H    V V+ G         G++   G    G L   ++ +   P  
Sbjct: 513 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTC 572

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP------------- 371
           VA     N       QIA G   +  +T   H   +    Y     P             
Sbjct: 573 VAALVEPNF-----CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGK 627

Query: 372 -------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                        + + V+     + TWG G +G+LG G+T D+  P +V    + Q R 
Sbjct: 628 LHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVR- 686

Query: 419 TQLEVFCGSGFTYAISRH 436
               V CG  FT AI  H
Sbjct: 687 ---TVVCGINFTAAICIH 701



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      +   +ACG    +ALT+      G V+
Sbjct: 547 KIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTT-----SGHVY 601

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 602 TMGSPVYGQLGNPQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 657

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  G+LGHGD    SSP  V +  +K V  + CG+  +  +
Sbjct: 658 GANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 698


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 162/382 (42%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + QIACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             + ++S S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 91/183 (49%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQLG G  L  + +PQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 23/300 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG     + +   P          I  I+ G+ HS  +S    +F+ G    
Sbjct: 108 WGLDTDGQLGLPGTEEYI-KVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G + +S S+P  + S +     Q+A G  HS VL    L   ++G+G  K GQLG
Sbjct: 167 GQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           ++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS 
Sbjct: 224 LNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 269 VNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
              P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +V
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SL+ + +  +ACG  H LAL+      G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIKVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E+     P+ +    G  +    ++AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 155/381 (40%), Gaps = 50/381 (13%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG  + G+LG G   D  SP  +N+ + ++++ +A G  H LA+TS      G   +WG
Sbjct: 64  AWGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTS-----AGTALAWG 118

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             + GQLG G  + +    PV        T+T +S G  H+  V+ +G     GD  +GQ
Sbjct: 119 DNAFGQLGDGTTIPSSS-TPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQ 177

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G      +PV V+      +  +A G  HSL +           +G    GQLG   
Sbjct: 178 LGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTS---AGTALAWGDNSSGQLG--D 232

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDV 269
                 S+P          I  ++A G  S AL++ G +  WG         G  ++S  
Sbjct: 233 GTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSST 292

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
                +P+  + +  A G  H L +T  G+VL  G +  G L D     S+ P++V +  
Sbjct: 293 PVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPA 352

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
                G  +  +A G+ HS  VT                               + WG  
Sbjct: 353 -----GTTITAVATGSGHSLAVT--------------------------STDTALAWGDN 381

Query: 390 EHGQLGLGNTCDQIHPKVVNL 410
             GQLG G+T   I P  V+L
Sbjct: 382 TFGQLGDGSTTSSIIPVAVDL 402



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 139/320 (43%), Gaps = 26/320 (8%)

Query: 38  SWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +WG    GQLG G  +    +P  +++ + ++V+ L+ GG H LA+TS      G   +W
Sbjct: 116 AWGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTS-----AGTALAW 170

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLG G    +  P  V    G   TIT ++AG  HS  V+ +G     GD + G
Sbjct: 171 GDNFWGQLGDGSTTRSRTPVAVNVPAG--TTITAVAAGQGHSLAVTSAGTALAWGDNSSG 228

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           QLG G     S PV         +  +A G  HSL L     G  V  +G+   GQLG  
Sbjct: 229 QLGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTS---GGDVLAWGANGSGQLG-- 283

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
                S S P          +  ++A G  S A+++ G +  WG       G  ST+  +
Sbjct: 284 DGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSS 343

Query: 271 CPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
            P +  +P+  + +  A G  H L +T     L  G +  G L D    SS  P++V L 
Sbjct: 344 TPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLP 403

Query: 329 KVSNLDGVKVIQIAAGAEHS 348
                 G  V  IA G+ HS
Sbjct: 404 A-----GTTVTAIAGGSFHS 418



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 79/163 (48%), Gaps = 7/163 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WGA   GQLG G      +P  +++ + ++V+ +A GG H LA+TS      G V 
Sbjct: 270 DVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTS-----AGDVL 324

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  ++GQLG G    +  P  V    G   TIT ++ G  HS  V+ +      GD T
Sbjct: 325 AWGDNTAGQLGDGSTTHSSTPVAVNVPAG--TTITAVATGSGHSLAVTSTDTALAWGDNT 382

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           FGQLG G   S   PV V       V  IA G  HSL ++   
Sbjct: 383 FGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAIVPST 425


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 155/340 (45%), Gaps = 56/340 (16%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V+ +ACG  H + +T       G++F++G    GQLG G   +    KP T        I
Sbjct: 37  VTDIACGDEHTVVVTE-----NGRLFTFGNNEWGQLGIGS--NKTRNKPTTVKALKPEKI 89

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
           TH++AG  H+  V+DS  L++ G G+ G LGHGD    + P  + S  +K+V+ IACG  
Sbjct: 90  THVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGY 149

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRS 247
           HS  + K+    ++Y +GS   GQLG+  D   ++S P  + +G     ++ ++     +
Sbjct: 150 HSAAITKN---GELYIWGSNSEGQLGLKND---TISYPTMLDLGK---SVISVACGYYHT 200

Query: 248 AALSAEGHLYTWGR--------GFNSTSDVNCPQSLPS-SLSFSQAALGWNHVLVLTGDG 298
           A ++A+G LYT+G         G      V  P+ +   S    + A G NH + LT  G
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASG 260

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
           +V   G   +G L    ++  +    +    V  L   K+  IA G  H+AVV+ K    
Sbjct: 261 QVYTFGSGQNGQLGLGSKIMDSNIPKL----VEALSKRKIKHIACGESHTAVVSDKGE-- 314

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
                                   + T+G G HG+LG G+
Sbjct: 315 ------------------------LFTFGDGRHGKLGQGD 330



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 154/333 (46%), Gaps = 32/333 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++++G    GQLG G       P  +       ++ +A G  H LA+T  +     K++
Sbjct: 55  RLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSN-----KLY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G+GS G LGHG+  D   P  +   +     I  I+ G  HS  ++ +G L+  G  +
Sbjct: 110 SFGQGSEGALGHGDETDLNMPTSIESLEDKDVNI--IACGGYHSAAITKNGELYIWGSNS 167

Query: 155 FGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG   D  S+ + + +     K+V  +ACG  H+ V+  D    ++Y FG  + G+L
Sbjct: 168 EGQLGLKNDTISYPTMLDLG----KSVISVACGYYHTAVVTAD---GKLYTFGETEGGKL 220

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------ST 266
           G+       V+ P+V  G+   ++V ++  G+ + AL+A G +YT+G G N         
Sbjct: 221 GLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKI 279

Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST--RP 322
            D N P+ +   S       A G +H  V++  GE+   G   HG L   +   S   +P
Sbjct: 280 MDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKP 339

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
           +     KV  L    V+ IA G  H+ V   K 
Sbjct: 340 V-----KVQRLKEFIVLHIACGGCHTIVACNKI 367


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 330 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 384

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+S  G LGHG  V    PK V    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 385 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 442

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 443 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 502

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      R V  P     L +     I+     + AL+  GH+YT    
Sbjct: 503 FTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSP 560

Query: 259 -WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +G+  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 561 VYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 617



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 149/378 (39%), Gaps = 63/378 (16%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +D L PKP+ F    +  + +IS G  H+  V+  G +++ G+ + G+LGHG     
Sbjct: 293 GVNMDCLIPKPLEF--AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
             P  + +  N N+  +ACG  H+  +    L   +Y +G+G    G LG   +    V 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVT---LSGDLYTWGNGTSNSGLLGHGNEVSHWVP 407

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS- 277
             +V   L  I +  IS     +A +++ G L+T+G       G      ++ P+ + S 
Sbjct: 408 -KRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL 466

Query: 278 -SLSFSQAALGWNH----VLVLTG--------DGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             L   +AA G  H    V V+ G         G++   G    G L   ++ +   P  
Sbjct: 467 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTC 526

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP------------- 371
           VA     N       QIA G   +  +T   H   +    Y     P             
Sbjct: 527 VAALVEPNF-----CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGK 581

Query: 372 -------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                        + + V+     + TWG G +G+LG G+T D+  P +V    + Q R 
Sbjct: 582 LHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVR- 640

Query: 419 TQLEVFCGSGFTYAISRH 436
               V CG  FT AI  H
Sbjct: 641 ---TVVCGINFTAAICIH 655



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      +   +ACG    +ALT+      G V+
Sbjct: 501 KIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTT-----SGHVY 555

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 556 TMGSPVYGQLGNPQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 611

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  G+LGHGD    SSP  V +  +K V  + CG+  +  +
Sbjct: 612 GANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 146/326 (44%), Gaps = 29/326 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G G  G+LG G     + P LL       V  +A   GG H LAL+S      G 
Sbjct: 3949 KVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4003

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +    PK +    G    I  ++ G +HS  ++ +G L+T G 
Sbjct: 4004 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTE--IVDVACGGHHSAAITSAGWLYTWGK 4061

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD     +P  V +  +  V  +ACG     +L +  D   + V+ +G G  
Sbjct: 4062 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4118

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
            G+LG  +       +P     L  + ++ +      S AL+  G +YTWG+      G  
Sbjct: 4119 GKLG--RGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHG 4176

Query: 265  STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            +   V  P+ + +         A G  H +  +  GEV   G +  G L D    +  RP
Sbjct: 4177 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRP 4236

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHS 348
                   V  L G K+ ++A G+ H+
Sbjct: 4237 -----RLVHALQGKKITRVACGSAHT 4257



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 10/226 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G       P+L+      +++ +ACG  +  AL+S      G++++
Sbjct: 527 VYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSS-----NGELYT 581

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+ G+LGHG   D + P  V+  +GH        +G + +  V+ SG +F+ GDG +
Sbjct: 582 WGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDY 641

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G      +P  V   ++ NV ++ CG + S  L       +VY +G G+  +LG 
Sbjct: 642 GKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEAYRLGH 698

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
             +    V  P+    L   ++  +        AL+ +  +Y WGR
Sbjct: 699 GNE--EHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGR 742



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 173/418 (41%), Gaps = 63/418 (15%)

Query: 29   EEQQVVKVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
            E  Q   V+ WG     QLG  +    +L     +LS L  V +   GG+  L + S   
Sbjct: 2904 ETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHI--AGGSKTLFVVSQE- 2960

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               GK+++ G G++G+LG G+  +A  PKP+ F   +      + +G  H+  ++  G +
Sbjct: 2961 ---GKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRV 3017

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            F+ G+G  G+LGHG+  S   P  + S  +K +  +ACG  HS  +       ++Y +G 
Sbjct: 3018 FSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITS---SGELYTWGL 3074

Query: 208  GKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG- 262
            G+ G+LG      +    L Q  +G   I++    A G R A   AL+A+G +Y+WG G 
Sbjct: 3075 GEYGRLGHGDTNTQLKPKLVQSLVGQRVIQV----ACGSRDAQTMALTADGSVYSWGDGD 3130

Query: 263  ---FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                       C   L     + L   Q   G    L LT  GEV   G   +  L    
Sbjct: 3131 FGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3190

Query: 316  RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
                 +P       V  L G KVI +A GA H   VT                       
Sbjct: 3191 DHHVRKP-----TLVEGLRGKKVIHVAVGALHCLAVT----------------------- 3222

Query: 376  VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
               +   +  WG  +HGQ G G+T     P +V+ L D   NR     V CGS  + A
Sbjct: 3223 ---DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNR-----VSCGSSHSIA 3272



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
            VWSWG G  G+LG G       P  + + SL+ + ++   CG    +ALT       G +
Sbjct: 4110 VWSWGDGDYGKLGRGGSDGCKVP--MKIESLAGLGVIKVECGSQFSVALTR-----SGSI 4162

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG+G   +LGHG       P+ V    G +  I  I+ G  H    SD G +FT GD 
Sbjct: 4163 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK--IISIATGSLHCVACSDKGEVFTWGDN 4220

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
              GQLG G   +   P  V +   K + ++ACG  H+L
Sbjct: 4221 DEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTL 4258



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 151/386 (39%), Gaps = 62/386 (16%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P         R     ++ G      V+  G ++  
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTADGKVYAT 3953

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S   P  + S  +  V ++A   G +H L L  +     VY +G G
Sbjct: 3954 GYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 4010

Query: 209  KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
              G+LG    +S DR      P++   L   EIV ++  G  SAA+++ G LYTWG+   
Sbjct: 4011 DDGKLGHGNRLSYDR------PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRY 4064

Query: 262  ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               G   + D   P+ + +   +    +    G    L +T D  V   G   +G L   
Sbjct: 4065 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4124

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYT 366
                   P+     K+ +L G+ VI++  G++ S  +T        GK  + RL   +  
Sbjct: 4125 GSDGCKVPM-----KIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDD 4179

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG G TC    P++V
Sbjct: 4180 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLV 4239

Query: 409  NLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +     Q +     V CGS  T A S
Sbjct: 4240 H---ALQGKKIT-RVACGSAHTLAWS 4261



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 29/238 (12%)

Query: 27  EEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           + + Q + +V +WG+   G  GTG      SP   +  +   +  L C    ++ L++  
Sbjct: 429 KNQSQTLQEVLAWGSVKFG--GTGS-----SPFYCDAIAELGIKQLCCTERALMILST-- 479

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
               G V+    GS  Q          YP+ V  F      +        H   +++   
Sbjct: 480 ---SGNVYMMYYGSETQ----------YPQRVYGFSDKFVAMIASHPDGKHYLALTEDSS 526

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +++ G+G  G+LGHGD   +  P  + S V+KN+  IACG  +S  L  +    ++Y +G
Sbjct: 527 VYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN---GELYTWG 583

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            G  G+LG        V +P +   L  H I  V   +   ++  ++A G +++WG G
Sbjct: 584 RGNYGRLGHGNS--DDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDG 639



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G   +LG G       P+ +       V  L  G  HVLALT    V G    
Sbjct: 684 EVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYG---- 739

Query: 95  SWGRGSSGQL 104
            WGR   GQ+
Sbjct: 740 -WGRNDYGQI 748



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 60/284 (21%), Positives = 109/284 (38%), Gaps = 66/284 (23%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           SSP    +     + Q+ C  R  ++L     GN VY    G   Q             P
Sbjct: 451 SSPFYCDAIAELGIKQLCCTERALMILSTS--GN-VYMMYYGSETQY------------P 495

Query: 227 QVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS 278
           Q   G  D  + ++    +G    AL+ +  +Y+WG G          +    P+ + S 
Sbjct: 496 QRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESL 555

Query: 279 L--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSN 332
           +  + +  A G  +   L+ +GE+   G  ++G L    SD   V +          VS 
Sbjct: 556 VDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTL---------VSA 606

Query: 333 LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHG 392
           L+G  ++ +A G+  S  +                         +  +  + +WG G++G
Sbjct: 607 LNGHMIVYVACGSGDSQTL------------------------CVTASGIVFSWGDGDYG 642

Query: 393 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +LG G       PK+V   D+  + +   +V+CG  F+ A++ +
Sbjct: 643 KLGRGGCNGSKTPKIV---DKLLDINVA-KVYCGGQFSAALTAY 682


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 143/303 (47%), Gaps = 25/303 (8%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + + + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 677 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVP 731

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 732 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 791

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 792 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 848

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 849 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 908

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 909 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALP-----GLDTKHIVGI 963

Query: 342 AAG 344
           A G
Sbjct: 964 ACG 966



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 712 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 766

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 767 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 826

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 827 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 883

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 884 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 931



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++    +VY           
Sbjct: 625 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN---GRVY--------TQA 673

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    I+ I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 674 YNSDTL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 729

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 730 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 788

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 789 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 819

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 820 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 871


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 154/329 (46%), Gaps = 35/329 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    GQLG G   D  +P  + +S L+S V  +A GG H  ALTS      G V+
Sbjct: 432 VWCWGLNNSGQLGDGSDTDSSTP--VAVSGLASGVETIAAGGWHTCALTSS-----GGVW 484

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WGR +SGQLG G  +  + P  V+   G    +T I+AG  H+  ++ SG ++  G   
Sbjct: 485 CWGRNNSGQLGDGSTIYHITPVAVS---GLPSGVTAIAAGDYHTCALTGSGGVWCWGYNL 541

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G     S+PV VS      V  IA G  H+  L        V+ +G+   GQLG
Sbjct: 542 SGQLGDGTTTDRSTPVAVSGLT-SGVTVIAAGRFHTCALTSS---GGVWCWGANFDGQLG 597

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
                 R+   P    GL    +  I+A G  + AL++ G ++ WG  +       +T++
Sbjct: 598 DGTTTNRTT--PVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTN 654

Query: 269 VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            + P +   LPS ++    A GW H   LT  GEV   G +++G L D    + + P   
Sbjct: 655 RSTPGAVSGLPSGVT--AIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTP--- 709

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
               VS L    V  IAAG  H+  +TG 
Sbjct: 710 --GAVSGLP-SGVTAIAAGVYHTCALTGS 735



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 159/383 (41%), Gaps = 56/383 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VW WG    GQLG G      S         S ++ +A GG H  AL S      G V+
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSS-----GGVW 280

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WGR  SGQLG G   D+  P  V+   G    +T I+AG  H+  ++ SG ++  G   
Sbjct: 281 CWGRNDSGQLGDGSDTDSSTPVAVS---GLPSGVTAIAAGDYHTCALTGSGEVWCWGGNG 337

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG G   + S+P  VS      V  IA G  H+  L+       V+ +G    GQLG
Sbjct: 338 FGQLGDGTTTARSTPAAVSGL-PSGVETIAAGDYHTCALMSS---GGVWCWGRNNSGQLG 393

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 RS   P    GL    +  I+A G  + AL + G ++ WG       G  S +D
Sbjct: 394 DGTTTARST--PAAVSGLPS-GVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTD 450

Query: 269 VNCPQSLPSSLSFSQ--AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            + P ++    S  +  AA GW H   LT  G V   G ++ G L D   +    P++V 
Sbjct: 451 SSTPVAVSGLASGVETIAAGGW-HTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAV- 508

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
               S L    V  IAAG  H+  +TG                             +  W
Sbjct: 509 ----SGLP-SGVTAIAAGDYHTCALTGS--------------------------GGVWCW 537

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN 409
           G+   GQLG G T D+  P  V+
Sbjct: 538 GYNLSGQLGDGTTTDRSTPVAVS 560



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 167/406 (41%), Gaps = 59/406 (14%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WG    GQLG G      +P  +  S L S V+ +A G  H  ALT       G V  WG
Sbjct: 77  WGGNDFGQLGDGTPTTRSTPGAV--SGLPSGVTAIAAGNYHTCALTGS-----GGVRCWG 129

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
              SGQLG+G       P  V+   G    +T I+AG +H+  +  SG +   GD  +GQ
Sbjct: 130 ANYSGQLGNGLTFGRSTPGAVS---GLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQ 186

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G   +  +PV VS      V  IA G  H+  L       +V+ +G    GQLG   
Sbjct: 187 LGDGTTTNRRTPVAVSGL-PSGVTAIAAGGLHTCALTGS---GEVWCWGYNYYGQLG-DG 241

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
               S S P    GL    +  I+A G  + AL + G ++ WGR      G  S +D + 
Sbjct: 242 TTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSST 300

Query: 272 P---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           P     LPS +  +  A G  H   LTG GEV   GG+  G L D    + + P      
Sbjct: 301 PVAVSGLPSGV--TAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTP-----A 353

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVR---------LFIISYTPFFP---PFF 373
            VS L    V  IAAG  H+  +    G + W R               TP      P  
Sbjct: 354 AVSGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG 412

Query: 374 INVIAENR----AIMT----WGWG--EHGQLGLGNTCDQIHPKVVN 409
           +  IA       A+M+    W WG    GQLG G+  D   P  V+
Sbjct: 413 VTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVS 458



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 137/300 (45%), Gaps = 29/300 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    GQLG G     ++P  + +S L S V+ +A G  H  ALT       G V+
Sbjct: 483 VWCWGRNNSGQLGDGSTIYHITP--VAVSGLPSGVTAIAAGDYHTCALTGS-----GGVW 535

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG   SGQLG G   D   P  V+   G    +T I+AG  H+  ++ SG ++  G   
Sbjct: 536 CWGYNLSGQLGDGTTTDRSTPVAVS---GLTSGVTVIAAGRFHTCALTSSGGVWCWGANF 592

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   + ++PV VS      V  IA G  H+  L       +V+ +G    GQLG
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGL-PSGVTAIAAGGWHTCALTSS---GEVWCWGDNYYGQLG 648

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
                 RS   P    GL    +  I+A  + + AL++ G ++ WG  +       +T++
Sbjct: 649 DGTTTNRST--PGAVSGLPS-GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTN 705

Query: 269 VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            + P +   LPS ++   A +   H   LTG G V+  G +  G L D   +  T P+ V
Sbjct: 706 RSTPGAVSGLPSGVTAIAAGV--YHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 763



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 172/408 (42%), Gaps = 56/408 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW WG    GQLG G      +P  +  S L S V  +A G  H  AL S      G V
Sbjct: 329 EVWCWGGNGFGQLGDGTTTARSTPAAV--SGLPSGVETIAAGDYHTCALMSS-----GGV 381

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WGR +SGQLG G       P  V+   G    +T I+AG  H+  +  SG ++  G  
Sbjct: 382 WCWGRNNSGQLGDGTTTARSTPAAVS---GLPSGVTAIAAGGLHTCALMSSGGVWCWGLN 438

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G     S+PV VS      V  IA G  H+  L        V+ +G    GQL
Sbjct: 439 NSGQLGDGSDTDSSTPVAVSGLA-SGVETIAAGGWHTCALTSS---GGVWCWGRNNSGQL 494

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G     I  ++ P    GL    +  I+A    + AL+  G ++ WG       G  +T+
Sbjct: 495 G-DGSTIYHIT-PVAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTT 551

Query: 268 DVNCPQSLPSSLS-FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           D + P ++    S  +  A G  H   LT  G V   G +  G L D    + T P++  
Sbjct: 552 DRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVA-- 609

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFIN--- 375
              VS L    V  IAAG  H+  +T        G  ++ +L   + T    P  ++   
Sbjct: 610 ---VSGLP-SGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLP 665

Query: 376 ----VIA---ENRAIMT-----WGWGE--HGQLGLGNTCDQIHPKVVN 409
                IA   E+   +T     W WG+  +GQLG G T ++  P  V+
Sbjct: 666 SGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVS 713



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 97/195 (49%), Gaps = 15/195 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WGA  DGQLG G   +  +P  + +S L S V+ +A GG H  ALTS      G+V+
Sbjct: 585 VWCWGANFDGQLGDGTTTNRTTP--VAVSGLPSGVTAIAAGGWHTCALTSS-----GEVW 637

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG    GQLG G   +   P  V+   G    +T I+AGW H+  ++ SG ++  GD  
Sbjct: 638 CWGDNYYGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGWEHTCALTSSGEVWCWGDNY 694

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G   + S+P  VS      V  IA G+ H+  L        V  +G+   GQLG
Sbjct: 695 YGQLGDGTTTNRSTPGAVSGL-PSGVTAIAAGVYHTCALTGS---GGVMCWGNNGDGQLG 750

Query: 215 VSKDRIRSVSLPQVT 229
             +   R+  +  VT
Sbjct: 751 DGRPLYRTTPVDVVT 765



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 116/291 (39%), Gaps = 49/291 (16%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +T I+AG  H+  ++ SG +   G   FGQLG G   + S+P  VS      V  IA G 
Sbjct: 55  VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGL-PSGVTAIAAGN 113

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H+  L        V  +G+   GQLG      RS   P    GL    +  I+A GD +
Sbjct: 114 YHTCALTGS---GGVRCWGANYSGQLGNGLTFGRST--PGAVSGLPS-GVTAIAAGGDHT 167

Query: 248 AALSAEGHLYTWGRGF------NSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDG 298
            AL + G +  WG  +       +T++   P     LPS +  +  A G  H   LTG G
Sbjct: 168 CALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGV--TAIAAGGLHTCALTGSG 225

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
           EV   G +++G L D     S R    A+  + +     +  IAAG  H+          
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYS-RSTPAAVGGLPS----GMTAIAAGGLHTC--------- 271

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                             +  +  +  WG  + GQLG G+  D   P  V+
Sbjct: 272 -----------------ALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVS 305



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 11/148 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW WG    GQLG G   +  +P  +  S L S V+ +A G  H  ALTS      G+V
Sbjct: 635 EVWCWGDNYYGQLGDGTTTNRSTPGAV--SGLPSGVTAIAAGWEHTCALTSS-----GEV 687

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WG    GQLG G   +   P  V+   G    +T I+AG  H+  ++ SG +   G+ 
Sbjct: 688 WCWGDNYYGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGVYHTCALTGSGGVMCWGNN 744

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
             GQLG G     ++PV V +  +  V+
Sbjct: 745 GDGQLGDGRPLYRTTPVDVVTSASWGVY 772


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 375 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 429

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+S  G LGHG  V    PK V    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 430 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 487

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 488 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 547

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      R V  P     L +     I+     + AL+  GH+YT    
Sbjct: 548 FTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSP 605

Query: 259 -WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +G+  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 606 VYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 662



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 177/406 (43%), Gaps = 70/406 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H   +T       G+++SWG  S G+LGHG  VD  
Sbjct: 342 DCLIPKPLEFAVKLDVQNISCGGRHATLVTK-----QGEIYSWGEESGGRLGHG--VDCD 394

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            P+P          I  ++ G  H+  V+ SG L+T G+GT   G LGHG+  SH  P +
Sbjct: 395 VPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKR 454

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  +   +V  I+CG  H+ ++       Q++ FG G  G LG   DR +S+S+P+   
Sbjct: 455 VNGPLEGIHVSAISCGPWHTAIVTS---AGQLFTFGDGSFGVLG-HGDR-QSLSVPREVE 509

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST-----SDVNCPQ 273
            L  +  V  +     +AA+             + G ++TWG G          D     
Sbjct: 510 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP 569

Query: 274 SLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           +  ++L   +F Q A G    + LT  G V  +G   +G L +P+      P+ V  +  
Sbjct: 570 TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ-ADGMLPVRVEGKLH 628

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
            N     V +I+ GA H AV+T +                            + TWG G 
Sbjct: 629 KNF----VEEISCGAYHVAVLTSRTE--------------------------VYTWGKGA 658

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+T D+  P +V    + Q R     V CG  FT AI  H
Sbjct: 659 NGRLGHGDTDDRSSPTLVESLKDKQVR----TVVCGINFTAAICIH 700


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 330 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 384

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+S  G LGHG  V    PK V    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 385 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 442

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 443 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 502

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G +G+LG      R V  P     L +     I+     + AL+  GH+YT    
Sbjct: 503 FTWGDGDKGRLGHGDKDTRLV--PTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSP 560

Query: 259 -WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +G+  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 561 VYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 617



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 149/378 (39%), Gaps = 63/378 (16%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +D L PKP+ F    +  + +IS G  H+  V+  G +++ G+ + G+LGHG     
Sbjct: 293 GVNMDCLIPKPLEF--AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
             P  + +  N N+  +ACG  H+  +    L   +Y +G+G    G LG   +    V 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVT---LSGDLYTWGNGTSNSGLLGHGNEVSHWVP 407

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS- 277
             +V   L  I +  IS     +A +++ G L+T+G       G      ++ P+ + S 
Sbjct: 408 -KRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL 466

Query: 278 -SLSFSQAALGWNH----VLVLTG--------DGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             L   +AA G  H    V V+ G         G++   G    G L   ++ +   P  
Sbjct: 467 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTC 526

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP------------- 371
           VA     N       QIA G   +  +T   H   +    Y     P             
Sbjct: 527 VAALVEPNF-----CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGK 581

Query: 372 -------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                        + + V+     + TWG G +G+LG G+T D+  P +V    + Q R 
Sbjct: 582 LHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVR- 640

Query: 419 TQLEVFCGSGFTYAISRH 436
               V CG  FT AI  H
Sbjct: 641 ---TVVCGINFTAAICIH 655



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      +   +ACG    +ALT+      G V+
Sbjct: 501 KIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTT-----SGHVY 555

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 556 TMGSPVYGQLGNPQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 611

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  G+LGHGD    SSP  V +  +K V  + CG+  +  +
Sbjct: 612 GANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L+S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ + 
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTLP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++++ +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  RV+   P ++       LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4004

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 4005 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4064

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4065 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4121

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4122 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4165



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 124/284 (43%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 3938 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3990

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V       V  IACG     +L 
Sbjct: 3991 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLC 4050

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 4051 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4105

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4106 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4165

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 4166 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4204



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 117/235 (49%), Gaps = 19/235 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G L     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TW   F
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWYVSF 3234



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P++++  S       V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  +    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 4057 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4111

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4112 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4169

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 4170 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4205



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPI--QLIGGEQTLFAVTADGKLYAT 3900

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 3901 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3957

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 3958 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4014

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L   L   +        G    L LT D  V   G   +G L      
Sbjct: 4015 GHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4074

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 4075 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4129

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4130 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4189

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4190 QGKKVNR-----VACGSAHTLAWS 4208



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++     N  V QIAC  +  L+L ++           G+     
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            + D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ + S+ S  Q        A G  +   +T +GE+   G  ++G L        
Sbjct: 534 LPLEEPKVI-SAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 124/299 (41%), Gaps = 36/299 (12%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
             ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3067

Query: 201  QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +G G  G+LG  S+    +   P++   L    I  I+     SAAL++ G LYTW
Sbjct: 3068 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 260  GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
            G G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    
Sbjct: 3125 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFIIS 364
            G L          P     + +  L+G  V QI  GA+ S  +T     + W   F++S
Sbjct: 3184 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWYVSFLLS 3237



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 51/282 (18%)

Query: 168  SPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
            S +KV SF       NV Q+A G +    L    +  +VY  G    G+LG+      +V
Sbjct: 2979 SKIKVPSFSETLSALNVVQVAGGSKS---LFAVTVEGKVYACGEATNGRLGLGLSS-GTV 3034

Query: 224  SLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNC--PQSL 275
             +P+    L  + ++ V + + G  + AL+ +G +++WG G +      S +NC  P+ +
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094

Query: 276  PS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
             +  +      A G +H   LT  GE+   G   +G L   +  +  +P     + V  L
Sbjct: 3095 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP-----KMVKVL 3149

Query: 334  DGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQ 393
             G +VIQ+A G+  +  +                         + +   + +WG G+ G+
Sbjct: 3150 LGHRVIQVACGSRDAQTLA------------------------LTDEGLVFSWGDGDFGK 3185

Query: 394  LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            LG G +     P+ +    E  N     ++ CG+ F+ A+++
Sbjct: 3186 LGRGGSEGCNIPQNI----ERLNGQGVCQIECGAQFSLALTK 3223



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            +  +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 258  TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
              G   N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G  
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
              G L    R++  +P       +  L   ++  IA G+ HSA +T              
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3117

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
                         +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V 
Sbjct: 3118 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158

Query: 425  CGS 427
            CGS
Sbjct: 3159 CGS 3161



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 79/353 (22%), Positives = 126/353 (35%), Gaps = 113/353 (32%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V+ +AC     L L+       G+V++    S          D L P+ V          
Sbjct: 454 VTQIACAEKRFLILSR-----NGRVYTQAYNS----------DTLAPQLVQGLASRNIVK 498

Query: 129 THISAGWNHSGFVSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
               +  +H   ++ +G +++  CGDG  G+LGHGD      P  +S+F           
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDG--GRLGHGDTLPLEEPKVISAF----------- 545

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
                               SGK+G                   G H   +V I+     
Sbjct: 546 --------------------SGKQG-------------------GKH---VVHIACGSTY 563

Query: 247 SAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTG 296
           SAA++AEG LYTWGRG        S+ D   P  +     L     A G      L +T 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
           +G+V   G   +G L          P    +EK+ +LD   VI++  G++ S  +T    
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VIKVRCGSQFSIALT---- 674

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                 ++  + +WG G++ +LG G      +PK++ 
Sbjct: 675 ----------------------KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 4160 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4218


>gi|357613967|gb|EHJ68816.1| putative X-linked retinitis pigmentosa GTPase regulator [Danaus
           plexippus]
          Length = 733

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 167/373 (44%), Gaps = 64/373 (17%)

Query: 69  VSMLACGGAHVLALTSPSSVI--GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
           +  ++CG  H       S+VI   G+VF +G  + GQLG G   +   P  V F   HR 
Sbjct: 57  IVAISCGDEH-------SAVICEKGRVFVFGANAWGQLGLGHKDEVTRPSCVKFLKPHRA 109

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           T   ++ G  H+ FV+D+  +++ G    GQLG GD   HS P  V   V   V Q++ G
Sbjct: 110 TF--VACGRAHTVFVTDTNAIYSVGCNDEGQLGSGDLEHHSVPQYVDLEV--TVKQVSAG 165

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG-D 245
             H+ +L +D    +V+  GS   GQLG+ +DR  ++S  ++      +E +     G  
Sbjct: 166 SNHTALLTED---GRVFVCGSNSEGQLGLGEDRRSALSFTELKF----MESIAFVECGYY 218

Query: 246 RSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD- 297
            +  ++A+G ++  G          N++S +  PQ LP  +    A  G NH  +L+ D 
Sbjct: 219 HTVFITAKGAVFVTGDNENQKLGIQNTSSILYVPQVLPLDVHIKSACCGANHTFLLSMDE 278

Query: 298 GEVLMLGGSHHGMLSDP-ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
            ++L  G +  G L  P E V+ T P  + +EK+   DG ++  +A GA H+A VT    
Sbjct: 279 SKILAFGSNEKGQLGMPKEVVNVTLPTEIDMEKM--FDGYQLKLVACGAMHTAFVT---- 332

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                                 +N  + T G   H +L L  T D  +       ++  N
Sbjct: 333 ----------------------DNGLLYTCGEARHNKLCLEETDDNTN------SNDLPN 364

Query: 417 RDTQLEVFCGSGF 429
           + T + V   +GF
Sbjct: 365 QYTPMRVTAMNGF 377


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 24/293 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G+   GQLG   + +++ P  +       V+ +ACG  H +A+T       G + 
Sbjct: 55  EVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTET-----GALA 109

Query: 95  SWGRGSSGQLG--HGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
           SWG    GQLG   G +VD + P+ V    G R    + ++AG  H+  ++ SG +++ G
Sbjct: 110 SWGGDEYGQLGFDSGNIVDGVQPRIVK---GSRDLHFSRVAAGGYHTLALTGSGDVYSFG 166

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+ G LGHG+    S+P  V S     V QIACG  HS  L  D    +V+ +G GK G
Sbjct: 167 DGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVD---GKVFTWGRGKYG 223

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NS 265
           QLG      +++ LP     L D +++ I+  GD + A++++G L++WG G        +
Sbjct: 224 QLG--HGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGT 281

Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
             DV  P+ +         Q + G  H +VL   GEV   G      L   +R
Sbjct: 282 KEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDR 334



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 27/328 (8%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V V++ G G  GQLG G   D  +P  L+      +  +A    H   LT       G+V
Sbjct: 2   VAVYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDE-----GEV 56

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++ G   +GQLG   M + + P  V   D H   +THI+ G+ H+  V+++G L + G  
Sbjct: 57  YTTGSNDAGQLGVRGMEEQVVPIRVAALDTH--MVTHIACGFKHTVAVTETGALASWGGD 114

Query: 154 TFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            +GQLG   G+      P  V    + +  ++A G  H+L L        VY FG G  G
Sbjct: 115 EYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGS---GDVYSFGDGSSG 171

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            LG     +   S P +   L  + +  I+   + SAAL+ +G ++TWGR      G  S
Sbjct: 172 ALG--HGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGS 229

Query: 266 TSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           T ++  P ++ + +     Q A G +H L +T DG +   G   HG+         T+  
Sbjct: 230 TQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWG---HGLWGQTGH--GTKED 284

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            ++ ++V  L+G  ++Q++AGA H+ V+
Sbjct: 285 VLSPKQVHQLEGRVLVQVSAGARHTVVL 312



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 144/328 (43%), Gaps = 44/328 (13%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G  V++ GRG  GQLG G+  D  +P P +        I HI+A   H+ F++D G ++T
Sbjct: 1   GVAVYALGRGDLGQLGIGDYSD--HPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT 58

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G    GQLG         P++V++     V  IACG +H++ + +      +  +G  +
Sbjct: 59  TGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTET---GALASWGGDE 115

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG     I     P++  G  D+    ++A G  + AL+  G +Y++G       G 
Sbjct: 116 YGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGH 175

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            +    + P  + S   L  +Q A G NH   LT DG+V   G   +G L      +   
Sbjct: 176 GNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGS--TQNI 233

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
            L VA++ + + D   VIQIA G +H+  +T      RLF                    
Sbjct: 234 KLPVAVKALVDHD---VIQIACGGDHTLAITSDG---RLF-------------------- 267

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
              +WG G  GQ G G   D + PK V+
Sbjct: 268 ---SWGHGLWGQTGHGTKEDVLSPKQVH 292


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 179/414 (43%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   P L+   ++++V+ +ACG  H  A+++      G +F
Sbjct: 281 EVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVST-----SGDLF 335

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK V+   +G    +  ++ G  HS   + +G LFT G
Sbjct: 336 TWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG--LQVVAVACGTWHSALATSNGKLFTFG 393

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG FG LGHG+  S + P +V         ++ACG+ HS  +                  
Sbjct: 394 DGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAI------------------ 435

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
                                  I+++ +S  G +++A      L+TWG G         
Sbjct: 436 -----------------------IDVMDLS--GSKASA----KRLFTWGDGDQYRLGHAN 466

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +  +  C  ++ +  +F Q A G+   + LT  G V  +GG+ +G L +P       P
Sbjct: 467 KETYLEPTCVAAV-AEYNFHQVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDGKV-P 524

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           + V       L G  V +I+ GA H AV+T +                            
Sbjct: 525 ILVR----DKLVGEFVEEISCGANHVAVLTSR--------------------------SE 554

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+T D+  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 555 LYTWGRGANGRLGHGDTDDKKSPTLV---EALKDRHVK-NISCGSTFTSCICLH 604


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 42/333 (12%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG G  GQLG G L D L P++ NLS L +V  +AC   H  A+ S      G++++WG 
Sbjct: 66  WGYGGCGQLGFGNLEDCLVPRV-NLS-LKNVVQVACSDRHTAAILS-----NGELYTWGC 118

Query: 99  GSSGQLGHGEMVDAL------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
             +G+LGHG+   ++       P  V   +G +  +  +S G  H+G ++D     T G 
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEK--VIQVSCGSYHTGCLTDDKKALTWGL 176

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD +   +P  + S     + +I+CG  H+ +LL   +  ++Y FG G  G+
Sbjct: 177 GLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILL---VTGKLYMFGGGAFGK 233

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           LG        V +P++  G L DI+I  +S     SAA++  G +YTWG+G       N 
Sbjct: 234 LGFGS--TDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNG 291

Query: 272 PQS---LPSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSH---HGMLSDPERVSS 319
           P+     P  LS  + A       G +H + L+  G++   G +    HG+      + S
Sbjct: 292 PEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHPNMPS 351

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             P+         L    ++Q+   + HS  ++
Sbjct: 352 KHPI---------LQNKNIVQVVCSSSHSIALS 375



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 179/414 (43%), Gaps = 69/414 (16%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WG+   GQ G+        P L++ L  LSS+S ++CG  +  A+T+      G +  WG
Sbjct: 13  WGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNS-----GDLILWG 67

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            G  GQLG G + D L P+     +     +  ++    H+  +  +G L+T G    G+
Sbjct: 68  YGGCGQLGFGNLEDCLVPR----VNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGK 123

Query: 158 LGHGDYRSH------SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           LGHG +         S P+KV +   + V Q++CG  H+  L  D    +   +G G +G
Sbjct: 124 LGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD---KKALTWGLGLQG 180

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNS 265
           +LG      + +  P++   L  + I  IS  G  +A L   G LY +G       GF S
Sbjct: 181 RLG--HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238

Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLM--LGGSHHGMLSDPERVSST 320
           T DV  P+ L   L     ++ +LG  H   +T  G+V     GG    + + PE     
Sbjct: 239 TDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHD--- 295

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
               ++ +++SNL+   ++ I+ G  HS                            +++ 
Sbjct: 296 ---FLSPKRLSNLEKAFIVDISCGNSHSV--------------------------ALSDV 326

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
             I TWG  ++    +G+    IHP + +     QN++  ++V C S  + A+S
Sbjct: 327 GDIYTWGMTKN----IGHGIQGIHPNMPSKHPILQNKNI-VQVVCSSSHSIALS 375



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 20/238 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS----PQLLNLSSL--SSVSMLACGGAHVLALTSPSSV 88
           ++++WG   +G+LG G+    +S     Q + + +L    V  ++CG  H   LT     
Sbjct: 112 ELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK-- 169

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
              K  +WG G  G+LGHG+  D   PK +    G    I  IS G +H+  +  +G L+
Sbjct: 170 ---KALTWGLGLQGRLGHGDTQDIFTPKLIESLAG--LPIKEISCGGHHTAILLVTGKLY 224

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
             G G FG+LG G       P  +     +  + +++ G +HS  + K C   +VY +G 
Sbjct: 225 MFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTK-C--GKVYTWGQ 281

Query: 208 GKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           G  G+LG +          P+    L    IV IS     S ALS  G +YTWG   N
Sbjct: 282 G--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN 337



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 41/266 (15%)

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
           +GS + GQ G   + +     P +  GL H   I  +S   + SAA++  G L  WG G 
Sbjct: 13  WGSSEYGQHGSKGEEVSPG--PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGG 70

Query: 263 -----FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE-R 316
                F +  D   P+   S  +  Q A    H   +  +GE+   G S +G L   +  
Sbjct: 71  CGQLGFGNLEDCLVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFE 130

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV--------RLFIISYTPF 368
           +S +  +     KV  L+G KVIQ++ G+ H+  +T     +        RL        
Sbjct: 131 LSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDI 190

Query: 369 FPPFFINVIA-----------ENRAIM-------TWGWGEHGQLGLGNTCDQIHPKVVNL 410
           F P  I  +A            + AI+        +G G  G+LG G+T D + P+++  
Sbjct: 191 FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLL-- 248

Query: 411 GDEFQNRDTQL-EVFCGSGFTYAISR 435
             E    D Q+ +V  GS  + A+++
Sbjct: 249 --EGPLEDIQITKVSLGSQHSAAVTK 272


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 166/416 (39%), Gaps = 99/416 (23%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
            KV++ G G  G+LGTG +   + P LL       +  +A   GG H LAL+S      G 
Sbjct: 3947 KVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GH 4001

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LGHG  +    PK +    G    I  I+ G +HS  +S +G L+T G 
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDRPKLIEALLGTE--IVDIACGGHHSAAISSAGWLYTWGK 4059

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKR 210
            G +G+LGHGD      P  V++     V  +AC  G   +L +  D   + V+ +G G  
Sbjct: 4060 GRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4116

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
            G+LG  +       +P     L  + +V +      S AL+  G +YTWG+G        
Sbjct: 4117 GKLG--RGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKG-------- 4166

Query: 271  CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
                                      D   L  G   H            RP      KV
Sbjct: 4167 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4185

Query: 331  SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
            S L G K++ IA G+ H    + K                            + TWG  +
Sbjct: 4186 SALQGKKIVSIATGSLHCVACSDKGE--------------------------VYTWGDND 4219

Query: 391  HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS----RHCLPSQT 442
             GQLG G T  Q  P++V+     Q ++    V CGS  T A S     H LP+ T
Sbjct: 4220 EGQLGDGTTHAQQSPRLVH---ALQGKNIT-RVACGSAHTLAWSTTKATHSLPAAT 4271



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G       PQ++ + S  +V+ +ACG  +  A++S      G++ +
Sbjct: 522 VYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISS-----TGELLT 576

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG--FVSDSGCLFTCGDG 153
           WGRGS G+LGHG   D   P  VT  +GH  T+TH++ G   S    V++SG +F+ GDG
Sbjct: 577 WGRGSYGRLGHGICDDISIPTVVTALNGH--TVTHVACGSGDSQTLCVTNSGIVFSWGDG 634

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LG G       P  V   +++NV ++ CG + S  L       +VY +G G   +L
Sbjct: 635 DYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH---GEVYTWGKGDHYRL 691

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G   +    V  P++  GL + ++  +S       A++ +  +Y WGR
Sbjct: 692 GHGNE--EHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGR 737



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 175/421 (41%), Gaps = 73/421 (17%)

Query: 31   QQVVKVWSWGAGTDGQLGTGR-------LHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
            QQ   V+ WG     QLG  +       +H E+      LS L  + +   GG+  L + 
Sbjct: 2919 QQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEV------LSKLKPIHI--AGGSKTLFVV 2970

Query: 84   SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            S      GK+++ G G++G+LG G+  +   PKP+ F   +      + +G  H+  ++ 
Sbjct: 2971 SQE----GKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQ 3026

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
             G +F+ G+G  G+LGHG+  S   P  + +  +K +  IACG  HS  +  +    ++Y
Sbjct: 3027 DGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASN---GELY 3083

Query: 204  GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG 260
             +G G+ G+LG   D    +  P++   L    ++ + A G R A   AL+ +G +Y+WG
Sbjct: 3084 TWGLGEYGRLG-HGDTTTHLK-PKLVDALVGQRVIQV-ACGSRDAQTMALTEDGSVYSWG 3140

Query: 261  RG----FNSTSDVNCPQSLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
             G            C   LP    + L   Q   G    L LT  GEV   G   +  L 
Sbjct: 3141 DGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3200

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
                    RP       V  L G KV+ +A GA H   VT                    
Sbjct: 3201 HGNDHHVRRP-----TLVEGLRGKKVVHVAVGALHCLAVT-------------------- 3235

Query: 373  FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTY 431
                  +   +  WG  +HGQ G G+T     P +V NL D   NR     V CGS  + 
Sbjct: 3236 ------DAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNR-----VACGSSHSI 3284

Query: 432  A 432
            A
Sbjct: 3285 A 3285



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 14/189 (7%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
           G H LALT+      G V+SWG G  G+LGHG+      P+ +        T+T+I+ G 
Sbjct: 510 GKHYLALTT-----KGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDR--TVTYIACGS 562

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            +S  +S +G L T G G++G+LGHG     S P  V++     V  +ACG   S  L  
Sbjct: 563 TYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTL-- 620

Query: 196 DCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
            C+ N   V+ +G G  G+LG  +       LP++   L D  +V +   G  SAAL+A 
Sbjct: 621 -CVTNSGIVFSWGDGDYGKLG--RGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677

Query: 254 GHLYTWGRG 262
           G +YTWG+G
Sbjct: 678 GEVYTWGKG 686



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 15/195 (7%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG G  G+LG G      SP  ++  +   V  + CG    LALT       G+V++
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTK-----YGEVWT 3190

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P  V    G +  + H++ G  H   V+D+G ++  GD   
Sbjct: 3191 WGKGDYFRLGHGNDHHVRRPTLVEGLRGKK--VVHVAVGALHCLAVTDAGQVYAWGDNDH 3248

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV-LLKD--CLGNQ-VYGFGSGK-- 209
            GQ G+G    +  P  V +  +  V+++ACG  HS+  +L D   LGNQ    F + K  
Sbjct: 3249 GQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQPTLGNQEPVTFPTAKDP 3308

Query: 210  --RGQLGVSKDRIRS 222
              +  LG ++D+  +
Sbjct: 3309 LGQATLGFTQDKTET 3323



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            +YG+G   RGQLG  +     + LP  ++  L  I++ G    G+++  A++A+G +Y  
Sbjct: 3896 IYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAG----GEQTLFAVTADGKVYAT 3951

Query: 260  GRG------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G G            V  P  L S   +   + A+  G  H L L+ +G V   G    G
Sbjct: 3952 GYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R++  RP     + +  L G +++ IA G  HSA ++    W            
Sbjct: 4012 KLGHGNRITYDRP-----KLIEALLGTEIVDIACGGHHSAAISSA-GW------------ 4053

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                         + TWG G +G+LG G++ DQ+ P VV     ++     ++V CGSG
Sbjct: 4054 -------------LYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYK----VIDVACGSG 4095



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 120/293 (40%), Gaps = 69/293 (23%)

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           G+  + S S P    +     V Q+ C  R  L+L    L  +VY    G   Q      
Sbjct: 439 GNVHFGSGSMPFYCDAIAEIGVKQLCCTERALLIL---SLSGKVYMMYYGSETQY----- 490

Query: 219 RIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRG----FNSTSDVNC- 271
                  PQ   G  D ++V I++  +G    AL+ +G +Y+WG G           +C 
Sbjct: 491 -------PQSVYGFAD-DVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD 542

Query: 272 -PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG-GSH----HGMLSDPERVSSTRPL 323
            PQ +   S  + +  A G  +   ++  GE+L  G GS+    HG+  D         +
Sbjct: 543 EPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDD---------I 593

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
           S+    V+ L+G  V  +A G+  S  +                         +  +  +
Sbjct: 594 SIP-TVVTALNGHTVTHVACGSGDSQTL------------------------CVTNSGIV 628

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +WG G++G+LG G +     PK+V   D+  +++  ++VFCG  F+ A++ H
Sbjct: 629 FSWGDGDYGKLGRGGSDGSKLPKIV---DKLLDQNV-VKVFCGGQFSAALTAH 677


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 160/378 (42%), Gaps = 54/378 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  N     +V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G    G
Sbjct: 59  GCNDLGQLGHEKSRKR--PEQVGALDAQ--NIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I    I+A G  S AL+  G ++ WGR      G N  +D 
Sbjct: 172 GYDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S      + G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P            I ++G
Sbjct: 286 RKVFELMGNIVTQIACGRQHTSA-----------------FVP--------STGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHP 405
            G +GQLG+G+T ++  P
Sbjct: 321 LGGNGQLGMGSTSNRKSP 338



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G  L  + SPQL+          +A GGAH  ALT     + G V
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +IS G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYISCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPST--GRIYSFGLGGNGQL 327

Query: 214 GVSKDRIRSVSLP 226
           G+     R    P
Sbjct: 328 GMGSTSNRKSPFP 340



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 142/328 (43%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF     T+  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK--TVRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDK---GQVYAWGFAAD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+         +P+    L D++IV ++     S ALS    +++WG+        G
Sbjct: 114 GQLGLPGTE-EYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
           ++     + PQ + S L   F Q A G  H   LT  G V   G +  G L   +     
Sbjct: 173 YDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I+ G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYISCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTGHEINPRKV 288



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
           +V++WG   DGQLG     +E +    N+ SLS V ++  ACG  H LAL+      G +
Sbjct: 104 QVYAWGFAADGQLGLPGT-EEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK-----GSE 157

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG+   GQLG G ++     P+ +    G  +    I+AG  HS  ++ SG +F  G
Sbjct: 158 VFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPF--GQIAAGGAHSFALTLSGAVFGWG 215

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              FGQLG  D      P  + S  ++ +  I+CG  H+  L K+     V+ FG+G  G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE---GGVFTFGAGGYG 272

Query: 212 QLG 214
           QLG
Sbjct: 273 QLG 275



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG      E++P+ +     + V+ +ACG  H  A   PS+   G+++S
Sbjct: 263 VFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFV-PST---GRIYS 318

Query: 96  WGRGSSGQLGHGEMVDALYPKPV 118
           +G G +GQLG G   +   P PV
Sbjct: 319 FGLGGNGQLGMGSTSNRKSPFPV 341


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 160/378 (42%), Gaps = 54/378 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  N     +V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G    G
Sbjct: 59  GCNDLGQLGHEKSRKR--PEQVGALDAQ--NIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I    I+A G  S AL+  G ++ WGR      G N  +D 
Sbjct: 172 GYDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S      + G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P            I ++G
Sbjct: 286 RKVFELMGNIVTQIACGRQHTSA-----------------FVP--------STGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHP 405
            G +GQLG+G+T ++  P
Sbjct: 321 LGGNGQLGMGSTSNRKSP 338



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G  L  + SPQL+          +A GGAH  ALT     + G V
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +IS G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYISCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPST--GRIYSFGLGGNGQL 327

Query: 214 GVSKDRIRSVSLP 226
           G+     R    P
Sbjct: 328 GMGSTSNRKSPFP 340



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 142/328 (43%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF     T+  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK--TVRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDK---GQVYAWGFAAD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+         +P+    L D++IV ++     S ALS    +++WG+        G
Sbjct: 114 GQLGLPGTE-EYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
           ++     + PQ + S L   F Q A G  H   LT  G V   G +  G L   +     
Sbjct: 173 YDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I+ G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYISCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTGHEINPRKV 288



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
           +V++WG   DGQLG     +E +    N+ SLS V ++  ACG  H LAL+      G +
Sbjct: 104 QVYAWGFAADGQLGLPGT-EEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK-----GSE 157

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG+   GQLG G ++     P+ +    G  +    I+AG  HS  ++ SG +F  G
Sbjct: 158 VFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPF--GQIAAGGAHSFALTLSGAVFGWG 215

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              FGQLG  D      P  + S  ++ +  I+CG  H+  L K+     V+ FG+G  G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE---GGVFTFGAGGYG 272

Query: 212 QLG 214
           QLG
Sbjct: 273 QLG 275



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG      E++P+ +     + V+ +ACG  H  A   PS+   G+++S
Sbjct: 263 VFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFV-PST---GRIYS 318

Query: 96  WGRGSSGQLGHGEMVDALYPKPV 118
           +G G +GQLG G   +   P PV
Sbjct: 319 FGLGGNGQLGMGSTSNRKSPFPV 341


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
           anatinus]
          Length = 3053

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 151/331 (45%), Gaps = 29/331 (8%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L PQL+  L+S + V + A   G H LAL +      G+VFSWG G  G+LGHG+ V 
Sbjct: 185 DTLGPQLVQGLASRNIVKVAAHSDGHHYLALAAT-----GEVFSWGCGDGGRLGHGDTVP 239

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 240 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 299

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 356

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D++IV +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 357 EKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 416

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D  R++  +P       +  LD   ++ I
Sbjct: 417 VDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPQP-----SALPGLDTKHIVGI 471

Query: 342 AAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           A G   S   +    W   +R+ F++   P 
Sbjct: 472 ACGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 502



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T     + G ++
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACIT-----VAGDLY 2332

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            SWG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 2333 SWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2392

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 2393 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 2449

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 2450 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 2493



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 155/360 (43%), Gaps = 60/360 (16%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H +ALT     + 
Sbjct: 1202 KVYACGEATNGRLGLG-ISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 1255

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 1256 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 1313

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 1314 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 1370

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWGRG      
Sbjct: 1371 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELR 1428

Query: 263  --------------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG---------- 298
                              +   C   LP     S   +GW  V +    G          
Sbjct: 1429 PDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGE 1488

Query: 299  ------EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
                  EV   G + HG   +     + +P       V  L+G K+ ++A G+ HS   T
Sbjct: 1489 RRERQLEVYAWGDNDHGQQGNGTTTVNRKP-----TLVQGLEGQKITRVACGSSHSVAWT 1543



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 126/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ V    G    +  I+AG
Sbjct: 2266 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRG--IEVVDIAAG 2318

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G L++ G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 2319 GAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 2378

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 2379 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 2433

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 2434 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 2493

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 2494 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 2532



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
           +V+SWG G  G+LG G       P+++  S+LS       V  +ACG  +  A+T+    
Sbjct: 220 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 274

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 275 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 332

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + ++ ++ CG + S+ L KD    QVY +G G
Sbjct: 333 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYSWGKG 389

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   ++V ++A      AL+ +  +++WG
Sbjct: 390 DNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 2385 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 2439

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 2440 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 2497

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 2498 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 2533



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 155/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 2228

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  V ++A   G +H L L  +    +VY +G  
Sbjct: 2229 GYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GEVYSWGEA 2285

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L  IE+V I+A G  SA ++  G LY+WG+      
Sbjct: 2286 EDGKLGHGN---RSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRL 2342

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 2343 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 2402

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 2403 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 2457

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 2458 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 2517

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 2518 QGKKINR-----VACGSAHTLAWS 2536



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 68/298 (22%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
           +G +G   Y +   P++     N  V QIAC  +  L+L ++    +VY   + S   G 
Sbjct: 133 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN---GRVYVQAYNSDTLG- 188

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
                        PQ+  GL    IV ++A+ D     AL+A G +++WG       G  
Sbjct: 189 -------------PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 235

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ + S+LS  QA       A G  +   +T +GE+   G  ++G L      
Sbjct: 236 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 294

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KVI ++ G+  +  +                         +
Sbjct: 295 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTL------------------------AV 325

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 326 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 379



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 29/282 (10%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 1144 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 1201

Query: 146  CLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQV 202
             ++ CG+ T G+LG G    +   P ++++  N  V ++A   G RH++ L  D    +V
Sbjct: 1202 KVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVD---GKV 1258

Query: 203  YGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            + +G G  G+LG  S+    +   P++   L    I  I+     SAA+++ G LYTWG 
Sbjct: 1259 FSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL 1315

Query: 262  GF-------NSTSDVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLGGSHHGM 310
            G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    G 
Sbjct: 1316 GEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 1374

Query: 311  LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            L          P     + +  L+G  V QI  GA+ S  +T
Sbjct: 1375 LGRGGSEGCNVP-----QNIERLNGQGVCQIECGAQFSLALT 1411



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 51/282 (18%)

Query: 168  SPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
            S +KV SF       NV Q+A G +    L    +  +VY  G    G+LG+      +V
Sbjct: 1168 SKIKVPSFSETLSALNVVQVAGGSKS---LFAVTVEGKVYACGEATNGRLGLGISS-GTV 1223

Query: 224  SLPQVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNC--PQSL 275
             LP+    L +  ++ V + + G  + AL+ +G +++WG G +      S +NC  P+ +
Sbjct: 1224 PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 1283

Query: 276  PS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
             +  +      A G +H   +T  GE+   G   +G L   +  +  +P     + V  L
Sbjct: 1284 EALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKP-----KMVKVL 1338

Query: 334  DGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQ 393
             G +VIQ+A G+  +  +                         + +   + +WG G+ G+
Sbjct: 1339 LGHRVIQVACGSRDAQTL------------------------ALTDEGLVFSWGDGDFGK 1374

Query: 394  LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            LG G +     P+ +    E  N     ++ CG+ F+ A+++
Sbjct: 1375 LGRGGSEGCNVPQNI----ERLNGQGVCQIECGAQFSLALTK 1412



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 52/241 (21%)

Query: 200  NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y  
Sbjct: 1149 TKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 1206

Query: 260  GRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHH 308
            G   N       S+  V  P+ +   S+    + A+  G  H + LT DG+V   G    
Sbjct: 1207 GEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1266

Query: 309  GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
            G L    R++  +P       +  L   ++  IA G+ HSA +T                
Sbjct: 1267 GKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGE------------ 1309

Query: 369  FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCG 426
                          + TWG GE+G+LG G+   Q+ PK+V   LG         ++V CG
Sbjct: 1310 --------------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVACG 1349

Query: 427  S 427
            S
Sbjct: 1350 S 1350



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+
Sbjct: 2488 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 2546


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 42/333 (12%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG G  GQLG G L D L P++ NLS L +V  +AC   H  A+ S      G++++WG 
Sbjct: 66  WGYGGCGQLGFGNLEDCLVPRV-NLS-LKNVIQVACSDRHTAAILS-----NGELYTWGC 118

Query: 99  GSSGQLGHGEMVDAL------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
             +G+LGHG+   ++       P  V   +G +  +  +S G  H+G ++D     T G 
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEK--VIQVSCGSYHTGCLTDDKKALTWGL 176

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD +   +P  + S     + +I+CG  H+ +LL   +  ++Y FG G  G+
Sbjct: 177 GLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILL---VTGKLYMFGGGAFGK 233

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           LG        V +P++  G L DI+I  +S     SAA++  G +YTWG+G       N 
Sbjct: 234 LGFGS--TDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNG 291

Query: 272 PQS---LPSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSH---HGMLSDPERVSS 319
           P+     P  LS  + A       G +H + L+  G++   G +    HG+      + S
Sbjct: 292 PEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHPNMPS 351

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             P+         L    ++Q+   + HS  ++
Sbjct: 352 KHPI---------LQNKNIVQVVCSSSHSIALS 375



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 180/417 (43%), Gaps = 69/417 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V  WG+   GQ G+        P L++ L  LSS+S ++CG  +  A+T+      G + 
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNS-----GDLI 64

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  GQLG G + D L P+     +     +  ++    H+  +  +G L+T G   
Sbjct: 65  LWGYGGCGQLGFGNLEDCLVPR----VNLSLKNVIQVACSDRHTAAILSNGELYTWGCSK 120

Query: 155 FGQLGHGDYRSH------SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            G+LGHG +         S P+KV +   + V Q++CG  H+  L  D    +   +G G
Sbjct: 121 NGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD---KKALTWGLG 177

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
            +G+LG      + +  P++   L  + I  IS  G  +A L   G LY +G       G
Sbjct: 178 LQGRLG--HGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLG 235

Query: 263 FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLM--LGGSHHGMLSDPERV 317
           F ST DV  P+ L   L     ++ +LG  H   +T  G+V     GG    + + PE  
Sbjct: 236 FGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHD 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
                  ++ +++SNL+   ++ I+ G  HS                            +
Sbjct: 296 ------FLSPKRLSNLEKAFIVDISCGNSHSV--------------------------AL 323

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           ++   I TWG  ++    +G+    IHP + +     QN++  ++V C S  + A+S
Sbjct: 324 SDVGDIYTWGMTKN----IGHGIQGIHPNMPSKHPILQNKNI-VQVVCSSSHSIALS 375



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 20/238 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS----PQLLNLSSL--SSVSMLACGGAHVLALTSPSSV 88
           ++++WG   +G+LG G+    +S     Q + + +L    V  ++CG  H   LT     
Sbjct: 112 ELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK-- 169

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
              K  +WG G  G+LGHG+  D   PK +    G    I  IS G +H+  +  +G L+
Sbjct: 170 ---KALTWGLGLQGRLGHGDTQDIFTPKLIESLAG--LPIKEISCGGHHTAILLVTGKLY 224

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
             G G FG+LG G       P  +     +  + +++ G +HS  + K C   +VY +G 
Sbjct: 225 MFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTK-C--GKVYTWGQ 281

Query: 208 GKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           G  G+LG +          P+    L    IV IS     S ALS  G +YTWG   N
Sbjct: 282 G--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN 337



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 27/246 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K  +WG G  G+LG G   D  +P+L+   +   +  ++CGG H   L     ++ GK++
Sbjct: 170 KALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL-----LVTGKLY 224

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            +G G+ G+LG G   D L P+     +G      IT +S G  HS  V+  G ++T G 
Sbjct: 225 MFGGGAFGKLGFGSTDDVLIPR---LLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ 281

Query: 153 GTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           G  G+LGH   G      SP ++S+     +  I+CG  HS V L D     +Y +G  K
Sbjct: 282 G--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHS-VALSDV--GDIYTWGMTK 336

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
               G+        ++P     L +  IV +  +   S ALS  G L         +S+ 
Sbjct: 337 NIGHGIQGIH---PNMPSKHPILQNKNIVQVVCSSSHSIALSDIGAL------VQKSSET 387

Query: 270 NCPQSL 275
             PQSL
Sbjct: 388 RKPQSL 393



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 41/266 (15%)

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
           +GS + GQ G   + +     P +  GL H   I  +S   + SAA++  G L  WG G 
Sbjct: 13  WGSTEYGQHGSKGEEVSPG--PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGG 70

Query: 263 -----FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE-R 316
                F +  D   P+   S  +  Q A    H   +  +GE+   G S +G L   +  
Sbjct: 71  CGQLGFGNLEDCLVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFE 130

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV--------RLFIISYTPF 368
           +S +  +     KV  L+G KVIQ++ G+ H+  +T     +        RL        
Sbjct: 131 LSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDI 190

Query: 369 FPPFFINVIA-----------ENRAIM-------TWGWGEHGQLGLGNTCDQIHPKVVNL 410
           F P  I  +A            + AI+        +G G  G+LG G+T D + P+++  
Sbjct: 191 FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLL-- 248

Query: 411 GDEFQNRDTQL-EVFCGSGFTYAISR 435
             E    D Q+ +V  GS  + A+++
Sbjct: 249 --EGPLEDIQITKVSLGSQHSAAVTK 272


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 175/388 (45%), Gaps = 58/388 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            + +WG+   G+LG G   +  +P  ++L + ++   +A G AH +ALT+      G V 
Sbjct: 55  TILAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTA-----AGTVL 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S GQLG G   D+L P  V+   G   T + ++AG +HS  ++ +G +   G  +
Sbjct: 110 AWGDNSHGQLGDGTGADSLTPVGVSLPAG--VTASAVAAGRDHSVALTSAGTVLAWGGNS 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG G     S+PV V+   +  V  +A G  HS+ L        V  +G    GQLG
Sbjct: 168 FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTS---AGTVLAWGGNPFGQLG 224

Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------N 264
               V +    +V+LP  T       +  ++A G+ S AL++ G +  WGR F       
Sbjct: 225 DGTVVDRSTPVAVALPPST------TVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDG 278

Query: 265 STSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           +  D + P   SLP+ ++ S  A G  H L LT  G VL  G +  G L D    +S+ P
Sbjct: 279 TVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDGTTTTSSTP 338

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           +SV L   + +  +     A  ++HS  +T                             A
Sbjct: 339 VSVTLPAATTITAIS----ARDSQHSVAMT--------------------------SAGA 368

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            ++WG    GQLG G T  +  P  V+L
Sbjct: 369 ALSWGRNLRGQLGDGTTTTRSTPVDVHL 396



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 148/331 (44%), Gaps = 34/331 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG  + GQLG G   D L+P  ++L +  + S +A G  H +ALTS      G V 
Sbjct: 107 TVLAWGDNSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTS-----AGTVL 161

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S GQLG G +VD   P  V        T+T ++AG  HS  ++ +G +   G   
Sbjct: 162 AWGGNSFGQLGDGTVVDRSTPVAVALPP--STTVTAVAAGATHSVALTSAGTVLAWGGNP 219

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG G     S+PV V+   +  V  +A G  HS+ L        V  +G    GQLG
Sbjct: 220 FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTS---AGTVLAWGRNFFGQLG 276

Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
               V +     VSLP        +    ++A    S AL+  G +  WG         G
Sbjct: 277 DGTVVDRSTPTVVSLPA------GVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330

Query: 263 FNSTSDVNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
             +TS      +LP++ + +  +A    H + +T  G  L  G +  G L D    + + 
Sbjct: 331 TTTTSSTPVSVTLPAATTITAISARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTTRST 390

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           P+ V L       GV V  IAAG +HS  +T
Sbjct: 391 PVDVHLPT-----GVTVTAIAAGDDHSLALT 416



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 115/280 (41%), Gaps = 46/280 (16%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
           F + S  +   G   FG+LG+G   + S+PV VS   +     IA G  HS+ L      
Sbjct: 49  FGAASDTILAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTA---A 105

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYT 258
             V  +G    GQLG   D   + SL  V + L   +    ++A  D S AL++ G +  
Sbjct: 106 GTVLAWGDNSHGQLG---DGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLA 162

Query: 259 WG------RGFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           WG       G  +  D + P +  LP S + +  A G  H + LT  G VL  GG+  G 
Sbjct: 163 WGGNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQ 222

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L D   V  + P++VAL   +      V  +AAG  HS  +T                  
Sbjct: 223 LGDGTVVDRSTPVAVALPPST-----TVTAVAAGGNHSVALT------------------ 259

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                       ++ WG    GQLG G   D+  P VV+L
Sbjct: 260 --------SAGTVLAWGRNFFGQLGDGTVVDRSTPTVVSL 291


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 163/378 (43%), Gaps = 50/378 (13%)

Query: 48  GTGRLHDELS------PQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGS 100
           G  R+H   S      PQ +++L+ LS + ++ CG  HVLAL +      GK+ SWGRG 
Sbjct: 84  GATRIHGRFSTYNSQRPQEVVSLAGLS-IKLITCGSDHVLALDA-----SGKIRSWGRGE 137

Query: 101 SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
           SGQLGH     +  P  +      R  +  ++ G   S  + + G L+T G   +GQLG 
Sbjct: 138 SGQLGHASFSHSSTPSIIDELASQR--VKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQ 195

Query: 161 GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
           GD  S + P  + S  +++VH +ACG  H +VL        VY +G+   GQLG    R 
Sbjct: 196 GDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVL---TTSRDVYTWGNNSYGQLG-HGFRK 251

Query: 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQS 274
           +    P+    +  ++I  I A  + S  +++ G +YTWGRG             + P  
Sbjct: 252 KHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTL 311

Query: 275 LPSSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLS---DPERVSSTR-PLSVAL 327
           L      +QA+L   G + ++ +T  G V   G +  G L    D     S R P  V  
Sbjct: 312 LSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVIS 371

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            K+ +         AA  EH A+           +++ T            +   +  WG
Sbjct: 372 PKIISF-------FAASEEHDAISLSSISCGSHHVLAIT-----------EKKDTLFAWG 413

Query: 388 WGEHGQLGLGNTCDQIHP 405
            GEHGQLGL        P
Sbjct: 414 RGEHGQLGLDPRDTSFRP 431



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 172/391 (43%), Gaps = 60/391 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+ SWG G  GQLG        +P +++  +   V  +ACG A   AL       GG+++
Sbjct: 129 KIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALME-----GGQLY 183

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G+   +  P+ +   + HR+ +  ++ G  H   ++ S  ++T G+ +
Sbjct: 184 TWGCNRYGQLGQGDRTSSAIPRMLPSMN-HRH-VHLMACGAAHIVVLTTSRDVYTWGNNS 241

Query: 155 FGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLGHG  + H   P  V      ++ QI  G  HS V+     G+ +Y +G G  GQL
Sbjct: 242 YGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMT--SFGD-IYTWGRGDFGQL 298

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANG-DRSAALSAEGHLYTWGRG---------- 262
           G     + S  +P +   L       +  +G D   A++  G +Y+WGR           
Sbjct: 299 G--HGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVD 356

Query: 263 --FNST----SDVNCPQSLP--------SSLSFSQAALGWNHVLVLTGDGEVLML-GGSH 307
             ++ +    SDV  P+ +          ++S S  + G +HVL +T   + L   G   
Sbjct: 357 MHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGE 416

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
           HG L    R +S RP+    ++V  + G+ V+  A    HS VV            +  P
Sbjct: 417 HGQLGLDPRDTSFRPIP---QEVKKMKGMIVLAAACSENHSVVV------------ATMP 461

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
              P        +  + +WG G  GQLG G+
Sbjct: 462 GSGP------KGDMKVFSWGRGSFGQLGYGS 486



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 28/208 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++WG G  GQLG G +  +  P LL+ L   +  S++  G   ++A+T       G V+
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMT-----YSGAVY 341

Query: 95  SWGRGSSGQLGHGEMV----------DALYPKPVTFFDGHR----YTITHISAGWNHSGF 140
           SWGR   GQLGHG  +          D + PK ++FF         +++ IS G +H   
Sbjct: 342 SWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLA 401

Query: 141 VSDS-GCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL--- 194
           +++    LF  G G  GQLG    D      P +V       V   AC   HS+V+    
Sbjct: 402 ITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMP 461

Query: 195 -KDCLGN-QVYGFGSGKRGQLGVSKDRI 220
                G+ +V+ +G G  GQLG    ++
Sbjct: 462 GSGPKGDMKVFSWGRGSFGQLGYGSGKV 489


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 25/256 (9%)

Query: 70  SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
           S L+ G  H  A+T       G V++WG+G  GQLGHG+ VD + P+PV    G    + 
Sbjct: 276 SALSFGAGHCAAVTDT-----GLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE---VK 327

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN--KNVHQIACGM 187
            +SAG+ H+  V+  G LFT GDG  G+LGH D      P  V++F+     V     G 
Sbjct: 328 SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGG 387

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H+LVL +     QV+ FGSG  G+LG   D  +    P     L     V I+A    S
Sbjct: 388 SHTLVLNRR---GQVFSFGSGDSGRLGHGNDNDQWS--PTFLSALESERCVSIAAGFAHS 442

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLP----SSLSFSQAALGWNHVLVLTGD 297
            AL+ +G +YTWG       G  S SD   P+ L      ++     A G  H  +   +
Sbjct: 443 VALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSE 502

Query: 298 GEVLMLGGSHHGMLSD 313
           G ++ LG   HG +++
Sbjct: 503 GSLITLGRVSHGRMAE 518



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 13/259 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG G  GQLG G   D++ PQ +       V  ++ G  H +A+T       G +F+
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRIK-GEVKSVSAGFYHTVAVTH-----HGALFT 347

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGH +    L P  V  F      +    AG +H+  ++  G +F+ G G  
Sbjct: 348 WGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDS 407

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LGHG+     SP  +S+  ++    IA G  HS+ L       Q+Y +G GK G+LG 
Sbjct: 408 GRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQ---GQIYTWGCGKLGRLGH 464

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNSTSDVNCPQS 274
             D    +      I    I+ + ++A    +    +EG L T GR      ++ +C Q 
Sbjct: 465 GSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSCAQD 524

Query: 275 LPSSLSFS---QAALGWNH 290
           +  +L  +   Q++  W+H
Sbjct: 525 MLDTLHTAISRQSSNDWHH 543



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S+G+G  G+LG G  +D+ SP  L+         +A G AH +ALT       G+++
Sbjct: 398 QVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQ-----GQIY 452

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  G+LGHG   D + P+ +            ++AG  H+      G L T G  +
Sbjct: 453 TWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVS 512

Query: 155 FGQLGHG 161
            G++  G
Sbjct: 513 HGRMAEG 519



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 21/252 (8%)

Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
           R   + +S G  H   V+D+G ++T G G +GQLGHGD      P  V   +   V  ++
Sbjct: 272 RVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPR-IKGEVKSVS 330

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD--IEIVGISA 242
            G  H++ +        ++ +G GK G+LG + +  R +  P +     +  + +    A
Sbjct: 331 AGFYHTVAVTHH---GALFTWGDGKEGKLGHNDNAQRLI--PTLVAAFIEWGMPVAAAQA 385

Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLV 293
            G  +  L+  G ++++G       G  + +D   P    +L S    S AA G+ H + 
Sbjct: 386 GGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAA-GFAHSVA 444

Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           LT  G++   G    G L          P  +AL  +S+ D +K I +AAG  H+ +   
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLAL--ISH-DTIKAIAVAAGEAHTCIFRS 501

Query: 354 KFHWVRLFIISY 365
           +   + L  +S+
Sbjct: 502 EGSLITLGRVSH 513



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 50/222 (22%)

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           VY +G G+ GQLG   D  + +  P   I     E+  +SA    + A++  G L+TWG 
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRI---KGEVKSVSAGFYHTVAVTHHGALFTWGD 350

Query: 262 GFNST--SDVNCPQSLPS--------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G       + N  + +P+         +  + A  G +H LVL   G+V   G    G L
Sbjct: 351 GKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRL 410

Query: 312 ---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
              +D ++ S T         +S L+  + + IAAG  HS  +T                
Sbjct: 411 GHGNDNDQWSPTF--------LSALESERCVSIAAGFAHSVALT---------------- 446

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                     +   I TWG G+ G+LG G+  D++ P+ + L
Sbjct: 447 ----------DQGQIYTWGCGKLGRLGHGSDSDEVLPRKLAL 478


>gi|417401058|gb|JAA47434.1| Putative alpha-tubulin suppressor [Desmodus rotundus]
          Length = 445

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 180/426 (42%), Gaps = 67/426 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++WGA + GQLG G   D LSPQ LN       +  +  GG H   +T      GG +F
Sbjct: 17  LFAWGANSYGQLGLGHKEDVLSPQQLNDFCKPMCIRRITGGGGHSAVVTD-----GGSLF 71

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
             G    G+LG G   D L   P     G    +  ++ GW+ +  +++SG + +CG  +
Sbjct: 72  VCGLNKDGRLGLGHTEDVLCFTPCRSLLG--CPVQQVACGWDFTVILTESGQVLSCGSNS 129

Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
           FGQLG  HG  RS     +    + + V  IA G+RH+L      +  Q +G G   SG+
Sbjct: 130 FGQLGVPHGPRRSVVP--QAIELLREKVVGIAAGLRHALAATASGIVFQ-WGTGLASSGR 186

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FN 264
           R   G +     +   P    GL +   + + A  + SA+L+  G LY WG        +
Sbjct: 187 RLCPGQTLPLFLTAKEPSRVTGLENSRAICVVAGSEHSASLTDAGELYVWGSNKHGQLAS 246

Query: 265 STSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLS-------- 312
             + +  PQ + +    ++       GW H++  T  G+V   G + +G L         
Sbjct: 247 QAAFLPVPQGIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKPESPEG 306

Query: 313 -DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            +PE+  S  P S   +   S+L  +    +++ G+EH+  V G                
Sbjct: 307 WNPEKQGSPFPCSRPQKNTPSSLHCLTGATEVSCGSEHNLAVVGG--------------- 351

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 429
                       A  +WGW EHG  G G+  +   PK+V    +     + L V CG+G 
Sbjct: 352 ------------ACCSWGWNEHGMCGDGSEANIWAPKLV----QALRSSSVLLVGCGAGH 395

Query: 430 TYAISR 435
           + A  +
Sbjct: 396 SLAFCQ 401


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 14/199 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG+ +DGQLG G     EL P+L++  +   ++ +ACGG H + ++       G V
Sbjct: 157 ELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISK-----SGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WGR + GQLG  ++ +   P  +      R  + + + G   S F++  G +FTCG G
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSR--VCYAACGEEFSVFLTMDGGVFTCGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG+  S   P ++   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 270 MYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPS--RGRVYAWGLGGAGQL 327

Query: 214 GVSKDRI-RSVSLPQVTIG 231
           G   +RI ++ + PQV  G
Sbjct: 328 G---NRIAQNSTTPQVVFG 343



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 161/388 (41%), Gaps = 62/388 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG+   G+LG G + DE   +P+ +N    + +  +ACG  + +A+T       G+V
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKE-----GQV 55

Query: 94  FSWGRGSSGQLGHGEMVDALY----PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           +S G    GQLG  +    L       P+ F           + G +H+  V++ G LF+
Sbjct: 56  YSCGNNDHGQLGQEKGRKRLQLISGIDPLAFRKA--------ACGSSHTLVVNEWGQLFS 107

Query: 150 CGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            G    GQLG     +    P  V +   K + QIACG++HS+ L  +    ++Y +GS 
Sbjct: 108 WGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNN---GELYAWGSN 164

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
             GQLG+  D    +  P++   L  + I  ++  G  +  +S  G ++ WGR      G
Sbjct: 165 SDGQLGLGSDTKMELK-PKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLG 223

Query: 263 FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +   + N P  L +  +     AA G    + LT DG V   G   +G L    + S  
Sbjct: 224 LSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEI 283

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P      ++  L G  V QI+ G  H+                         + ++   
Sbjct: 284 LP-----RQIMELMGSTVTQISCGRRHT-------------------------LALVPSR 313

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             +  WG G  GQLG     +   P+VV
Sbjct: 314 GRVYAWGLGGAGQLGNRIAQNSTTPQVV 341



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 31/239 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG+  +GQLG  R+   +  P+++       +  +ACG  H +ALT+      G++
Sbjct: 104 QLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTN-----NGEL 158

Query: 94  FSWGRGSSGQLGHG---------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           ++WG  S GQLG G         ++V +L   P+ F          ++ G  H+  +S S
Sbjct: 159 YAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAF----------VACGGYHTIVISKS 208

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G +F  G  TFGQLG  D ++ + P ++ +  N  V   ACG   S+ L  D     V+ 
Sbjct: 209 GAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMD---GGVFT 265

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRG 262
            G+G  GQLG       S  LP+  + L    +  IS     + AL  + G +Y WG G
Sbjct: 266 CGAGMYGQLGHGNK--TSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLG 322


>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
 gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1349

 Score =  114 bits (286), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 161/372 (43%), Gaps = 67/372 (18%)

Query: 32   QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
            Q  +++ WG G  GQLG    +    P L N+     +  + CG  H +AL+S      G
Sbjct: 981  QTGELYLWGKGNSGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSMALSS-----SG 1035

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +V+SWG G  GQLGH +M     PK + +F      I +IS G +HS  +S+ G L+T G
Sbjct: 1036 QVYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDLYTWG 1095

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ--------------IACGMRHSLVLLKDC 197
                 +L   + ++   PV       K ++Q              ++ G+ H+ V+  D 
Sbjct: 1096 CNYDYRLMINENKNQYKPVLTQLHYLKEIYQKSGQDISQKFNVQLVSLGVNHTAVITVD- 1154

Query: 198  LGNQVYGFGSGKRGQLGV-------SKDRIRSVSLPQVTIG-------LHDIEIVG---- 239
                VY  G G  G+LG+       + D IR +   Q +         LH ++  G    
Sbjct: 1155 --GSVYTAGLGNHGELGIILNESVPNTDIIRDIVCQQNSNNVEERCCYLHKVQTFGEENK 1212

Query: 240  ---ISANGDRSAALSAEGHLYTWGRGFNSTSD-VNCPQSLPS------------------ 277
               I+   + +  L+AEG +Y +G+  +   D +   Q +                    
Sbjct: 1213 AIDIACGYEFTIVLNAEGTVYQFGKKISQGPDFIGTKQEIQDYVTKDSQNVTPQIMYEFG 1272

Query: 278  SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGV 336
            ++   Q A G NH+ ++T +GE+   G + +  L    ++  S +P+ +  E ++NL   
Sbjct: 1273 NIRVQQIAAGKNHIAIITENGELYTWGKNFYDKLDMGDDKHESNKPVKL-FEGINNL--- 1328

Query: 337  KVIQIAAGAEHS 348
            + IQ++ G  HS
Sbjct: 1329 QCIQVSCGEFHS 1340



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 97/438 (22%), Positives = 170/438 (38%), Gaps = 118/438 (26%)

Query: 37   WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS--------- 87
            ++WG+G DG+LG G    E +P +LN         L+CG  H   +T             
Sbjct: 915  FAWGSGKDGRLGLGTDRGESNPTMLNSQQF---IYLSCGYYHTAGITEKGIYNQYYLQTD 971

Query: 88   --------VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
                    +  G+++ WG+G+SGQLG+     +  P            I  +  GW HS 
Sbjct: 972  KVKNILYFIQTGELYLWGKGNSGQLGNSSFNSSKVPILANI--PQTIPIVQVVCGWQHSM 1029

Query: 140  FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN--KNVHQIACGMRHSLVLLKDC 197
             +S SG +++ G G  GQLGH D  + ++P  +  F    K +  I+CG  HS  + ++ 
Sbjct: 1030 ALSSSGQVYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEE- 1088

Query: 198  LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-----------------DIEIVGI 240
                +Y +G     +L +++++ +      V   LH                 ++++V +
Sbjct: 1089 --GDLYTWGCNYDYRLMINENKNQ---YKPVLTQLHYLKEIYQKSGQDISQKFNVQLVSL 1143

Query: 241  SANGDRSAALSAEGHLYTWGRG--------FNST-------SDVNCPQS----------L 275
              N   +A ++ +G +YT G G         N +        D+ C Q+          L
Sbjct: 1144 GVN--HTAVITVDGSVYTAGLGNHGELGIILNESVPNTDIIRDIVCQQNSNNVEERCCYL 1201

Query: 276  PSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
                +F +       A G+   +VL  +G V   G     +   P+ + + + +   + K
Sbjct: 1202 HKVQTFGEENKAIDIACGYEFTIVLNAEGTVYQFGKK---ISQGPDFIGTKQEIQDYVTK 1258

Query: 330  VSN---------LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
             S             ++V QIAAG  H A++T                          EN
Sbjct: 1259 DSQNVTPQIMYEFGNIRVQQIAAGKNHIAIIT--------------------------EN 1292

Query: 381  RAIMTWGWGEHGQLGLGN 398
              + TWG   + +L +G+
Sbjct: 1293 GELYTWGKNFYDKLDMGD 1310


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 168/405 (41%), Gaps = 67/405 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG   +GQLG G     L P  + +  LS V  +  G +H LAL S      G V+
Sbjct: 106 TVWAWGDNPNGQLGEGTTTRRLVP--VQVQGLSEVVAVTAGSSHSLALRSD-----GTVW 158

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  +SGQLG G   + L P PV         +  + AG +HS  +   G ++  G   
Sbjct: 159 AWGANASGQLGEGTTTNRLVPVPVLGLS----EVVAVEAGSSHSLALRSDGTVWAWGANA 214

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G       PV+V S     V  +  G  +SL +  D     V+ +G    GQLG
Sbjct: 215 SGQLGDGTTTKRLVPVQVLS----GVVAMEAGSGYSLAVRND---GTVWAWGYNFSGQLG 267

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
              D + S S P   +GL   E+V ++A    S AL ++G ++ WG      RG  +TS+
Sbjct: 268 --DDTVTSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSN 323

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P            A G+ H L +  DG V   G +  G L +    + + P+     
Sbjct: 324 RAFPVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPV----- 378

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L GV  + ++AGA  S                            I  +  +  WG 
Sbjct: 379 QVQGLSGV--VAVSAGASSSLA--------------------------IRSDGTVWAWGS 410

Query: 389 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
              GQLG G T D++ P       + Q     + V  G+ F+ A+
Sbjct: 411 NASGQLGDGTTTDRLVPV------QVQGLSGVVAVVAGTSFSLAV 449



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 152/377 (40%), Gaps = 61/377 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+ G    GQLG G   +  +P  + +  LS V   A G  H LAL +      G V+
Sbjct: 6   TVWAAGNNGSGQLGDGTRDNRSTP--VQVLGLSEVVAAAAGSIHSLALRND-----GTVW 58

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG+G +     P  V    G       + AG  HS  V D G ++  GD  
Sbjct: 59  AWGYNGYGQLGNGSLGSRAEPVQVQGLSGG----VSVDAGHYHSLAVRDDGTVWAWGDNP 114

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G       PV+V       V  +  G  HSL L  D     V+ +G+   GQLG
Sbjct: 115 NGQLGEGTTTRRLVPVQVQGL--SEVVAVTAGSSHSLALRSD---GTVWAWGANASGQLG 169

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 R V +P   +GL   E+V + A    S AL ++G ++ WG       G  +T+ 
Sbjct: 170 EGTTTNRLVPVP--VLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  + S +   +A  G  + L +  DG V   G +  G L D    S + P+ V   
Sbjct: 226 RLVPVQVLSGVVAMEAGSG--YSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQV--- 280

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
               L   +V+ +AAG+  S                            +  +  +  WG 
Sbjct: 281 ----LGLSEVVAVAAGSSLSL--------------------------ALRSDGTVWAWGS 310

Query: 389 GEHGQLGLGNTCDQIHP 405
            ++GQ G G T ++  P
Sbjct: 311 NDYGQRGEGTTSNRAFP 327



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 142/322 (44%), Gaps = 36/322 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+   GQLG G   +   P  + +  LS V  ++ G +  LA+ S      G V+
Sbjct: 354 TVWAWGSNASGQLGEGTTSNRSEP--VQVQGLSGVVAVSAGASSSLAIRSD-----GTVW 406

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  +SGQLG G   D L P  V    G    +  + AG + S  V + G ++  G   
Sbjct: 407 AWGSNASGQLGDGTTTDRLVPVQVQGLSG----VVAVVAGTSFSLAVRNDGTVWGWGYNG 462

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG         PV+V+      V  +A G  HSL +  D     V+  G    GQLG
Sbjct: 463 YGQLGTFTSLFVLVPVQVTGL--SGVVAVAAGNLHSLAVRSD---GTVWALGRNDNGQLG 517

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----- 269
                 RS  + QVT GL    +V ++A    S A+  +G ++ W  G+NS   +     
Sbjct: 518 DGSWTNRSAPV-QVT-GLSG--VVSVAAGDSHSLAVRYDGSVWAW--GYNSFGQLGDGSW 571

Query: 270 ---NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              + P  +         A   ++ + +  DG V   G + +G L D    SS + + V 
Sbjct: 572 FQRSAPVQVTGLSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGT-TSSNQLVPV- 629

Query: 327 LEKVSNLDGVKVIQIAAGAEHS 348
             +V  L GV  +++  G+ HS
Sbjct: 630 --QVQQLRGVVAVEV--GSSHS 647



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 27/234 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW WG    GQLGT      L P  + ++ LS V  +A G  H LA+ S      G V+
Sbjct: 454 TVWGWGYNGYGQLGTFTSLFVLVP--VQVTGLSGVVAVAAGNLHSLAVRSD-----GTVW 506

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + GR  +GQLG G   +   P  VT   G    +  ++AG +HS  V   G ++  G  +
Sbjct: 507 ALGRNDNGQLGDGSWTNRSAPVQVTGLSG----VVSVAAGDSHSLAVRYDGSVWAWGYNS 562

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG G +   S+PV+V+    +    +A    +S+ +  D     V+ +G    GQLG
Sbjct: 563 FGQLGDGSWFQRSAPVQVTGLSGRG--SVAASSDYSMAVRYD---GTVWAWGFNLYGQLG 617

Query: 215 ---VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
               S +++  V + Q+        +V +      S AL ++G ++TW  G+NS
Sbjct: 618 DGTTSSNQLVPVQVQQLR------GVVAVEVGSSHSLALRSDGTVWTW--GYNS 663



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 112/295 (37%), Gaps = 56/295 (18%)

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G ++  G+   GQLG G   + S+PV+V       V   A G  HSL L  D     V+ 
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDNRSTPVQVLGL--SEVVAAAAGSIHSLALRND---GTVWA 59

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           +G    GQLG     + S + P    GL     V + A    S A+  +G ++ WG    
Sbjct: 60  WGYNGYGQLG--NGSLGSRAEPVQVQGLSG--GVSVDAGHYHSLAVRDDGTVWAWGDNPN 115

Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              G  +T+    P  +           G +H L L  DG V   G +  G L   E  +
Sbjct: 116 GQLGEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLG--EGTT 173

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           + R + V +  +S     +V+ + AG+ HS                            + 
Sbjct: 174 TNRLVPVPVLGLS-----EVVAVEAGSSHSL--------------------------ALR 202

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            +  +  WG    GQLG G T  ++ P  V  G         + +  GSG++ A+
Sbjct: 203 SDGTVWAWGANASGQLGDGTTTKRLVPVQVLSG--------VVAMEAGSGYSLAV 249


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 177/414 (42%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   +  ++  +ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    P+ ++   +G    I ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FG LGHGD +S S P +V S        +ACG+ H+  +                  
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
                                  +E++       +S+A  + G L+TWG G         
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +     C  SL     F + A G +  + LT  G+V  +G S +G L +    S  RP
Sbjct: 284 KEARLKPTCVASLI-DYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN--SDGRP 340

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             V  +  S      V+QIA G+ H AV+T +                            
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSE-------------------------- 370

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 371 VFTWGKGANGRLGHGDIEDRKVPTTV---EALRDRAVR-HIACGANFTAAICLH 420


>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
 gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
          Length = 408

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 174/413 (42%), Gaps = 68/413 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG---AHVLALTSPSSVIGGK 92
           V SWGAG  GQLG G L D LSP  +       V  ++ GG   A   AL          
Sbjct: 47  VLSWGAGRTGQLGNGTLSDSLSPSSVTSLFRGDVDQMSAGGTSSADSFALARTDKT---- 102

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V SWG  SSGQLG+G   +   P  V         I  ++AG  H+  +  SG +++ GD
Sbjct: 103 VKSWGHNSSGQLGNGGNTNQTVPTTVPRL----TDIKDVAAGGKHALALDTSGQVYSWGD 158

Query: 153 GTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            ++GQLG+   GD R+   P +V       V QI+ G   SL LL++    +VY +G G 
Sbjct: 159 NSYGQLGNNRTGDSRT--VPDRVQGM--PKVKQISAGCDFSLALLEN---GKVYAWGRGI 211

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG       SV  P+   GL +I  V I A    + AL+A+  + +WG       G 
Sbjct: 212 HGQLGTGNRATSSV--PRQVQGLENI--VEIDAGCYHALALTADDTVKSWGYNLYGQLGN 267

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV---SST 320
           +ST     P  +      S    G  H  V T D  V   G + +G L + +     + +
Sbjct: 268 SSTKSSTLPVDVDWIEGVSDIEAGAFHNYVKTSDSHVWGWGNNQYGQLLESDEAFDANVS 327

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
           R    A  ++  L+GV+   +AAGA H   VT                            
Sbjct: 328 RTNRTAPVEIPRLEGVQ--HLAAGARHGVAVTAD-------------------------- 359

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYA 432
             + TWG    GQLG G T  +    K++N G   +N    + V  G   TYA
Sbjct: 360 -DVFTWGHNGEGQLGNGTTVARYESVKILNEGSAIKN----VAVSLGGNTTYA 407



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 20/230 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG  + GQLG  R  D  + P    +  +  V  ++ G    LAL     +  GKV
Sbjct: 152 QVYSWGDNSYGQLGNNRTGDSRTVPD--RVQGMPKVKQISAGCDFSLAL-----LENGKV 204

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG  GQLG G    +  P+ V   +     I  I AG  H+  ++    + + G  
Sbjct: 205 YAWGRGIHGQLGTGNRATSSVPRQVQGLE----NIVEIDAGCYHALALTADDTVKSWGYN 260

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLG+   +S + PV V     + V  I  G  H+ V   D     V+G+G+ + GQL
Sbjct: 261 LYGQLGNSSTKSSTLPVDVDWI--EGVSDIEAGAFHNYVKTSDS---HVWGWGNNQYGQL 315

Query: 214 GVSKDRIRS-VSLPQVTIGLHDIEIVGIS--ANGDRSAALSAEGHLYTWG 260
             S +   + VS    T  +    + G+   A G R         ++TWG
Sbjct: 316 LESDEAFDANVSRTNRTAPVEIPRLEGVQHLAAGARHGVAVTADDVFTWG 365



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 26/223 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV++WG G  GQLGTG       P+   +  L ++  +  G  H LALT+  +V      
Sbjct: 203 KVYAWGRGIHGQLGTGNRATSSVPR--QVQGLENIVEIDAGCYHALALTADDTVK----- 255

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG    GQLG+     +  P  V + +G    ++ I AG  H+   +    ++  G+  
Sbjct: 256 SWGYNLYGQLGNSSTKSSTLPVDVDWIEG----VSDIEAGAFHNYVKTSDSHVWGWGNNQ 311

Query: 155 FGQLGHGD--------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +GQL   D          + ++PV++     + V  +A G RH + +  D     V+ +G
Sbjct: 312 YGQLLESDEAFDANVSRTNRTAPVEIPRL--EGVQHLAAGARHGVAVTAD----DVFTWG 365

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
               GQLG      R  S+  +  G   I+ V +S  G+ + A
Sbjct: 366 HNGEGQLGNGTTVARYESVKILNEG-SAIKNVAVSLGGNTTYA 407


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 161/378 (42%), Gaps = 63/378 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG+ + GQ+G G   D  SP  + ++S++    +A   A  L L        G VF+
Sbjct: 270 VWAWGSNSSGQMGDGTWTDRPSP--VQVTSIARAKAVAAQDAGSLVLLDD-----GGVFA 322

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  S GQLG G   D+  P  V         +T ++AG  H+  +   G L+T G G  
Sbjct: 323 WGLNSQGQLGIGTTADSPLPVRVRGLG----AVTSLAAGTQHAVVLRADGTLWTWGHGAT 378

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
           GQLGHG      SP  V+     NV  +A G  HS+  L D     V+ +G    GQL  
Sbjct: 379 GQLGHGSSERMLSPEVVTRL--SNVASVASGSFHSVAALSD---GSVWTWGRNTNGQLGD 433

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G + +R   V +P ++       +V +SA+G  S AL ++G ++ WGR      G  +T 
Sbjct: 434 GTTTERHLPVRVPGLS------GVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTK 487

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           D   P  +    S    A G +H++ L  DG V   G +  G L D        P+    
Sbjct: 488 DRASPARVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPV---- 543

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +V+ L G  V  +AAGA                          +F   +  +  +  WG
Sbjct: 544 -QVTGLSG--VTSVAAGA--------------------------YFSLALRTDGTVWAWG 574

Query: 388 WGEHGQLGLGNTCDQIHP 405
            G  GQLG G    +  P
Sbjct: 575 DGFEGQLGDGAGVQRASP 592



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 151/372 (40%), Gaps = 78/372 (20%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT------------ 83
            VW+WGA   GQLG G L D  SP  L +  L+ ++    G AH L ++            
Sbjct: 870  VWTWGANGSGQLGDGTLGDRASP--LEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANG 927

Query: 84   -------------SPSSVIG--------------------GKVFSWGRGSSGQLGHGEMV 110
                         SP  V G                    G V+SWG   SGQLG G  V
Sbjct: 928  RGQLGDGTTTSSASPVRVAGLSAAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGTNV 987

Query: 111  DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
                PKPV         +  ++AG +H   V   G ++  G   FGQ+G G +     PV
Sbjct: 988  ARTTPKPVQDL----ADVKAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTHFWRFRPV 1043

Query: 171  KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
            +V   +  N  + + G +HSL LL D    +   +GS + GQLG   D     SL  V +
Sbjct: 1044 RVEGLL--NAVETSAGEQHSLALLGD---ERALSWGSHEYGQLG---DAESGPSLEPVGV 1095

Query: 231  GLHDIEI----VGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLS 280
             L   ++    V +SA    +AAL A+G + TWG       G  +T     P ++    +
Sbjct: 1096 KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLGA 1155

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS-VALEKVSNLDGVKVI 339
                A    H L L  DG V   G +  G L D      T P+  V LEKV+        
Sbjct: 1156 MVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLEKVT-------- 1207

Query: 340  QIAAGAEHSAVV 351
             IAAG+ HS  V
Sbjct: 1208 AIAAGSYHSLAV 1219



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 157/381 (41%), Gaps = 63/381 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG+   GQLG G  H +  P    +  L+ V  LA G    LA+ S      G V++
Sbjct: 170 VWAWGSNFYGQLGRG--HSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSD-----GTVWA 222

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   SGQLG G  +  L P  V+   G    ++ ++AG  H+  +   G ++  G  + 
Sbjct: 223 WGANGSGQLGDGTYIQRLAPTQVSQLQG----VSAVTAGLYHALALRSDGTVWAWGSNSS 278

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQ+G G +    SPV+V+S        +A     SLVLL D     V+ +G   +GQLG+
Sbjct: 279 GQMGDGTWTDRPSPVQVTSIARAKA--VAAQDAGSLVLLDD---GGVFAWGLNSQGQLGI 333

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
                    LP    GL    +  ++A    +  L A+G L+TWG G        S+  +
Sbjct: 334 GT--TADSPLPVRVRGLG--AVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERM 389

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P+ +    + +  A G  H +    DG V   G + +G L D        P+     +
Sbjct: 390 LSPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV-----R 444

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           V  L G  V+ ++A   HS                             A       WGWG
Sbjct: 445 VPGLSG--VVSVSASGHHS----------------------------FALRSDGTVWGWG 474

Query: 390 EH--GQLGLGNTCDQIHPKVV 408
            +  GQ+G G T D+  P  V
Sbjct: 475 RNAQGQMGDGTTKDRASPARV 495



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 151/379 (39%), Gaps = 54/379 (14%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG  + GQLG G +     P    +  L  V  +  GG   + L +      G V++
Sbjct: 820  VWSWGGNSQGQLGDGGVTSRAYPA--KVEGLWGVVAVLAGGDSSMVLRAD-----GTVWT 872

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG   SGQLG G + D   P  V    G    I     G  H+  VS  G ++  G    
Sbjct: 873  WGANGSGQLGDGTLGDRASPLEVKGLAG----IATGVMGEAHALVVSQDGTVWAWGANGR 928

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G   S +SPV+V+         ++ G  +SL +L D     V+ +G+   GQLG 
Sbjct: 929  GQLGDGTTTSSASPVRVAGL--SAAMNVSVGQAYSLAVLPD---GTVWSWGANDSGQLGD 983

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSDVN---- 270
              +  R+   P+    L D++ V  +A      A+  +G ++ WG   F    D      
Sbjct: 984  GTNVARTT--PKPVQDLADVKAV--TAGAHHVVAVRHDGTVWGWGANAFGQVGDGTHFWR 1039

Query: 271  -CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
              P  +   L+  + + G  H L L GD   L  G   +G L D E   S  P+ V L  
Sbjct: 1040 FRPVRVEGLLNAVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLEPVGVKLPS 1099

Query: 330  VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
               L  V  + ++A  +H+A                           +  +  + TWG  
Sbjct: 1100 SKVL--VPAVSVSAWHQHAAA--------------------------LLADGTVQTWGGN 1131

Query: 390  EHGQLGLGNTCDQIHPKVV 408
              GQLG G T  +  P  V
Sbjct: 1132 ADGQLGDGTTESRATPITV 1150



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 176/452 (38%), Gaps = 100/452 (22%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WGA   GQLG G      SP  + ++ LS+   ++ G A+ LA+     +  G V+S
Sbjct: 920  VWAWGANGRGQLGDGTTTSSASP--VRVAGLSAAMNVSVGQAYSLAV-----LPDGTVWS 972

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG   SGQLG G  V    PKPV         +  ++AG +H   V   G ++  G   F
Sbjct: 973  WGANDSGQLGDGTNVARTTPKPVQDL----ADVKAVTAGAHHVVAVRHDGTVWGWGANAF 1028

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQ+G G +     PV+V   +N    + + G +HSL LL D    +   +GS + GQLG 
Sbjct: 1029 GQVGDGTHFWRFRPVRVEGLLN--AVETSAGEQHSLALLGD---ERALSWGSHEYGQLG- 1082

Query: 216  SKDRIRSVSLPQVTIGLHDIEI----VGISANGDRSAALSAEGHLYTWG------RGFNS 265
              D     SL  V + L   ++    V +SA    +AAL A+G + TWG       G  +
Sbjct: 1083 --DAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGT 1140

Query: 266  TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            T     P ++    +    A    H L L  DG V   G +  G L D      T P+ V
Sbjct: 1141 TESRATPITVAGLGAMVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQV 1200

Query: 326  -ALEKVS--------------------------------------------NLDGVKVIQ 340
              LEKV+                                             LDG   + 
Sbjct: 1201 VGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGA--VA 1258

Query: 341  IAAGAEHSAVV--------TGKFHWVRLFIISYTPFFPPFFIN----------------V 376
            +A G  HS ++        TG     +L   ++T    PF +                  
Sbjct: 1259 VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVELDQVRTVRAGGYHSVA 1318

Query: 377  IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + E+  + TWG    GQLG G    +  P  V
Sbjct: 1319 LREDGTVWTWGHNGQGQLGDGTVTTRRVPAPV 1350



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 166/398 (41%), Gaps = 51/398 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG  + GQLG G   D  SP  + +  L +V+ LA G  H + L +      G +++
Sbjct: 320 VFAWGLNSQGQLGIGTTAD--SPLPVRVRGLGAVTSLAAGTQHAVVLRAD-----GTLWT 372

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G++GQLGHG     L P+ VT        +  +++G  HS      G ++T G  T 
Sbjct: 373 WGHGATGQLGHGSSERMLSPEVVTRLS----NVASVASGSFHSVAALSDGSVWTWGRNTN 428

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
           GQLG G       PV+V       V  ++    HS  L  D     V+G+G   +GQ+G 
Sbjct: 429 GQLGDGTTTERHLPVRVPGL--SGVVSVSASGHHSFALRSD---GTVWGWGRNAQGQMGD 483

Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
             +KDR    + P    GL  ++   +++ G    AL  +G ++TWG       G  +T+
Sbjct: 484 GTTKDR----ASPARVEGLSSVKA--LASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTT 537

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-A 326
           D   P  +      +  A G    L L  DG V   G    G L D   V    P+ V  
Sbjct: 538 DRRAPVQVTGLSGVTSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTG 597

Query: 327 LEKVSNLDGVKVI--------QIAAGAEHSAVVTGKFHWVRLF-------IISYTPFFPP 371
           L +V  L               + A  +++    G   W   F       +   +     
Sbjct: 598 LTRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVSSVVGG 657

Query: 372 FFINV-IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + ++ +A++  +  WG   +GQ G G     + P+VV
Sbjct: 658 LYHSMALAQDGTLRAWGGNAYGQFGDGG----VTPRVV 691



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 126/297 (42%), Gaps = 30/297 (10%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +WG    GQ G G     ++P+++   +  LS + +L     HVLA+        G + +
Sbjct: 672 AWGGNAYGQFGDG----GVTPRVVAGAVPGLSGIKLLGASYLHVLAVRED-----GMLLT 722

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G    +  P  V      R     +SAG  HS  V   G +   G  T 
Sbjct: 723 WGYNRFGQLGLGAAGWSSLPVQVRGLGQGR----RLSAGRAHSLLVRADGTVLAWGQNTS 778

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G     +SPV   +         + G +HSLVL  D     V+ +G   +GQLG 
Sbjct: 779 GQLGDGSTTHRASPVLARNL--PCARAASAGRQHSLVLACD---GTVWSWGGNSQGQLG- 832

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
               + S + P    GL    +V + A GD S  L A+G ++TWG       G  +  D 
Sbjct: 833 -DGGVTSRAYPAKVEGLWG--VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDR 889

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
             P  +      +   +G  H LV++ DG V   G +  G L D    SS  P+ VA
Sbjct: 890 ASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVRVA 946



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 167/398 (41%), Gaps = 47/398 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG    GQ+G G   D  SP    +  LSSV  LA GG+H++AL +      G V++
Sbjct: 470 VWGWGRNAQGQMGDGTTKDRASPA--RVEGLSSVKALASGGSHMVALRTD-----GTVWT 522

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   +GQLG G   D   P  VT   G    +T ++AG   S  +   G ++  GDG  
Sbjct: 523 WGYNGAGQLGDGTTTDRRAPVQVTGLSG----VTSVAAGAYFSLALRTDGTVWAWGDGFE 578

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G     +SPV+V+      V ++A G  H L +  D     V+ +G    GQ+G 
Sbjct: 579 GQLGDGAGVQRASPVQVTGLT--RVVKLAAGAAHGLAVRDD---GTVWAWGDNTEGQMGD 633

Query: 216 S--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
               DR R+V +  +T G+  + + G+      S AL+ +G L  WG       G    +
Sbjct: 634 GSWSDRFRAVQVYGLT-GVSSV-VGGLY----HSMALAQDGTLRAWGGNAYGQFGDGGVT 687

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-A 326
                 ++P           + HVL +  DG +L  G +  G L       S+ P+ V  
Sbjct: 688 PRVVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRG 747

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN----------- 375
           L +   L   +   +   A+ + +  G+    +L   S T    P               
Sbjct: 748 LGQGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCARAASAG 807

Query: 376 -----VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                V+A +  + +WG    GQLG G    + +P  V
Sbjct: 808 RQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKV 845



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 167/387 (43%), Gaps = 47/387 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG G  GQLG G     LSP+++  + LS+V+ +A G  H +A  S      G V++
Sbjct: 370 LWTWGHGATGQLGHGSSERMLSPEVV--TRLSNVASVASGSFHSVAALSD-----GSVWT 422

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR ++GQLG G   +   P  V    G    +  +SA  +HS  +   G ++  G    
Sbjct: 423 WGRNTNGQLGDGTTTERHLPVRVPGLSG----VVSVSASGHHSFALRSDGTVWGWGRNAQ 478

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
           GQ+G G  +  +SP +V      +V  +A G  H + L  D     V+ +G    GQLG 
Sbjct: 479 GQMGDGTTKDRASPARVEGL--SSVKALASGGSHMVALRTD---GTVWTWGYNGAGQLGD 533

Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
             + DR   V   QVT GL  +  V  +A    S AL  +G ++ WG GF       +  
Sbjct: 534 GTTTDRRAPV---QVT-GLSGVTSV--AAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGV 587

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-A 326
               P  +       + A G  H L +  DG V   G +  G + D       R + V  
Sbjct: 588 QRASPVQVTGLTRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYG 647

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP--------------FFPPF 372
           L  VS++ G     +A   + +    G   + +      TP                   
Sbjct: 648 LTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGAS 707

Query: 373 FINVIA--ENRAIMTWGWGEHGQLGLG 397
           +++V+A  E+  ++TWG+   GQLGLG
Sbjct: 708 YLHVLAVREDGMLLTWGYNRFGQLGLG 734



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 172/409 (42%), Gaps = 66/409 (16%)

Query: 13  KSALINNAKPKIEEEEEEQ----QVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSL 66
           +S  + +A  K+    +      Q   VW+WG    GQLGTG +  +  ++ Q+  L+ +
Sbjct: 42  RSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDV 101

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
           +S+   A G AH LAL +  +V     ++WG  ++GQ+G G  VD   P+ V        
Sbjct: 102 TSI---AAGDAHSLALRADRTV-----WTWGGNNAGQVGDGTNVDRPTPQKVPGLS---- 149

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
            +  ++AG  HS  +   G ++  G   +GQLG G  +   SP +V       V  +A G
Sbjct: 150 DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTG--VVALAAG 207

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
              SL +  D     V+ +G+   GQLG     I+ ++  QV+  L  +  V  +A    
Sbjct: 208 FDFSLAVRSD---GTVWAWGANGSGQLG-DGTYIQRLAPTQVSQ-LQGVSAV--TAGLYH 260

Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
           + AL ++G ++ WG       G  + +D   P  + S       A      LVL  DG V
Sbjct: 261 ALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGV 320

Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRL 360
              G +  G L       S  P+     +V  L    V  +AAG +H+ V          
Sbjct: 321 FAWGLNSQGQLGIGTTADSPLPV-----RVRGLG--AVTSLAAGTQHAVV---------- 363

Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                           +  +  + TWG G  GQLG G++   + P+VV 
Sbjct: 364 ----------------LRADGTLWTWGHGATGQLGHGSSERMLSPEVVT 396



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 148/387 (38%), Gaps = 77/387 (19%)

Query: 38   SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
            +WG   DGQLG G      +P  + ++ L ++  +A    H LAL S      G V++WG
Sbjct: 1127 TWGGNADGQLGDGTTESRATP--ITVAGLGAMVAVAPAARHTLALRSD-----GTVWAWG 1179

Query: 98   RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
              + GQLG G       P  V   +     +T I+AG  HS  V + G ++  G   FGQ
Sbjct: 1180 DNTFGQLGDGSNTRRTLPVQVVGLE----KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQ 1235

Query: 158  LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GV 215
            LG G   + + P ++          +A G  HSL+L  D     ++  G+   GQL  G 
Sbjct: 1236 LGDGTMDARAVPTRMLGL--DGAVAVAGGEYHSLMLRFD---GTLWATGNNSHGQLGEGT 1290

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
              +R+     P   + L  +  V   A G  S AL  +G ++TWG       G  + +  
Sbjct: 1291 FTNRLS----PFQVVELDQVRTV--RAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTR 1344

Query: 270  NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
              P  +P   + +    G +H   +    E    G + HG L   +      P       
Sbjct: 1345 RVPAPVPGLTAIASVGAGTSHTFAV--GSETWAWGRNSHGQLGTGDSSDRLEP-----TL 1397

Query: 330  VSNLDGVKVI------QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            V  L GVK +       +A GA+ SA                                  
Sbjct: 1398 VKGLHGVKSVLAGGDFSVAQGADGSA---------------------------------- 1423

Query: 384  MTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            M+WG   HG LG+G    +  P  V L
Sbjct: 1424 MSWGTNVHGTLGIGLPGQRTVPGAVTL 1450



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 156/384 (40%), Gaps = 65/384 (16%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V +WG  T GQLG G      SP L    +L      + G  H L L        G V+S
Sbjct: 770  VLAWGQNTSGQLGDGSTTHRASPVLAR--NLPCARAASAGRQHSLVLACD-----GTVWS 822

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  S GQLG G +    YP  V       + +  + AG + S  +   G ++T G    
Sbjct: 823  WGGNSQGQLGDGGVTSRAYPAKVEGL----WGVVAVLAGGDSSMVLRADGTVWTWGANGS 878

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGKRGQ 212
            GQLG G     +SP++V     K +  IA G+    H+LV+ +D     V+ +G+  RGQ
Sbjct: 879  GQLGDGTLGDRASPLEV-----KGLAGIATGVMGEAHALVVSQD---GTVWAWGANGRGQ 930

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            LG       S + P    GL     + +S     S A+  +G +++WG       G  + 
Sbjct: 931  LG--DGTTTSSASPVRVAGLS--AAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGTN 986

Query: 267  SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
                 P+ +           G +HV+ +  DG V   G +  G + D       RP+   
Sbjct: 987  VARTTPKPVQDLADVKAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTHFWRFRPV--- 1043

Query: 327  LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
              +V  L  +  ++ +AG +HS                         + ++ + RA ++W
Sbjct: 1044 --RVEGL--LNAVETSAGEQHS-------------------------LALLGDERA-LSW 1073

Query: 387  GWGEHGQLGLGNTCDQIHPKVVNL 410
            G  E+GQLG   +   + P  V L
Sbjct: 1074 GSHEYGQLGDAESGPSLEPVGVKL 1097



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 117/295 (39%), Gaps = 68/295 (23%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG  T GQLG G       P  + +  L  V+ +A G  H LA+        G V++
Sbjct: 1175 VWAWGDNTFGQLGDGSNTRRTLP--VQVVGLEKVTAIAAGSYHSLAVRED-----GTVWA 1227

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG    GQLG G M     P  +   DG       ++ G  HS  +   G L+  G+ + 
Sbjct: 1228 WGYNVFGQLGDGTMDARAVPTRMLGLDG----AVAVAGGEYHSLMLRFDGTLWATGNNSH 1283

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD------------------- 196
            GQLG G + +  SP +V       V  +  G  HS+ L +D                   
Sbjct: 1284 GQLGEGTFTNRLSPFQVVEL--DQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTV 1341

Query: 197  --------------------------CLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQV 228
                                       +G++ + +G    GQLG   S DR+     P +
Sbjct: 1342 TTRRVPAPVPGLTAIASVGAGTSHTFAVGSETWAWGRNSHGQLGTGDSSDRLE----PTL 1397

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP--QSLPSSLSF 281
              GLH ++ V   A GD S A  A+G   +WG   + T  +  P  +++P +++ 
Sbjct: 1398 VKGLHGVKSV--LAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPGQRTVPGAVTL 1450



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 93/250 (37%), Gaps = 51/250 (20%)

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG---VSKDRIRSVSL 225
           P   S  +     ++A G +HSL + +      V+ +G    GQLG   VS  R+ +  +
Sbjct: 39  PAARSQALASATSKVAAGAQHSLYVTQ---AGTVWAWGGNGSGQLGTGSVSFQRVVAQQV 95

Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL 279
           P +T      ++  I+A    S AL A+  ++TWG       G  +  D   PQ +P   
Sbjct: 96  PGLT------DVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLS 149

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
                A G  H L L  DG V   G + +G L          P      +V  L GV  +
Sbjct: 150 DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSP-----AQVVGLTGV--V 202

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
            +AAG +                          F   +  +  +  WG    GQLG G  
Sbjct: 203 ALAAGFD--------------------------FSLAVRSDGTVWAWGANGSGQLGDGTY 236

Query: 400 CDQIHPKVVN 409
             ++ P  V+
Sbjct: 237 IQRLAPTQVS 246


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 176/412 (42%), Gaps = 98/412 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P+L+   S++ V  ++CG  H  A+++      G +F
Sbjct: 277 EVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEFHTCAISA-----SGDLF 331

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG GS  +G LG+        PK V+   +G    +  ++ G  HS  ++ +G L+T G
Sbjct: 332 NWGDGSYHAGLLGYDTGASHWLPKRVSGPLEG--LQVLFVACGSWHSALITSTGRLYTFG 389

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHG+  S + P +V +       ++ACG+ HS  +++       + +  ++Y 
Sbjct: 390 DGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAIVEATVQTGMNMVSKKLYT 449

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                             GD+ A L              
Sbjct: 450 WGDGDKNRLG----------------------------QGDKEARLIP------------ 469

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                 C Q+L    +F Q A G N  + L   G V  +G S +G L +P +    +P  
Sbjct: 470 -----TCVQALLEH-NFHQLACGQNMTVALATSGHVYTMGSSDNGQLGNP-KSDGKQPCL 522

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V  +    L    V +I+ GA H AV+T +                            + 
Sbjct: 523 VKDKLAHEL----VEEISCGAAHVAVLTSR--------------------------SEVY 552

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS FT  I  H
Sbjct: 553 TWGMGANGRLGHGDLNDKKAPTIV---EALKDRHVK-SISCGSNFTTCICIH 600



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 135/358 (37%), Gaps = 94/358 (26%)

Query: 91  GKVFSWGR---GSSGQLGHG----EMVDALYPKPV---TFFDGHRYTITHISAGWNHSGF 140
           G V+ WG     ++   GH       VD L PKP+      D     +  I  G  H   
Sbjct: 217 GDVYVWGEVWTDAAPSDGHTTSSCSKVDVLIPKPLESDVVLD-----VNQIVCGSRHIAL 271

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            +  G +FT G+   G+LGHG     S P  V S     V  I+CG  H+  +     G+
Sbjct: 272 TTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEFHTCAI--SASGD 329

Query: 201 QV-YGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYT 258
              +G GS   G LG   D   S  LP+   G L  ++++ ++     SA +++ G LYT
Sbjct: 330 LFNWGDGSYHAGLLGY--DTGASHWLPKRVSGPLEGLQVLFVACGSWHSALITSTGRLYT 387

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           +                                    GDG    LG   HG      R S
Sbjct: 388 F------------------------------------GDGTFGALG---HG-----NRES 403

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           S  P     ++V  L+G + I++A G  HSA +        + ++S              
Sbjct: 404 SAYP-----KEVEALNGFRTIKVACGVWHSAAIVEATVQTGMNMVS-------------- 444

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 434
             + + TWG G+  +LG G+   ++ P  V   L   F       ++ CG   T A++
Sbjct: 445 --KKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFH------QLACGQNMTVALA 494


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 177/414 (42%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   +  ++  +ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    P+ ++   +G    I ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FG LGHGD +S S P +V S        +ACG+ H+  +                  
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
                                  +E++       +S+A  + G L+TWG G         
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +     C  SL     F + A G +  + LT  G+V  +G S +G L +    S  RP
Sbjct: 284 KEARLKPTCVASL-IDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN--SDGRP 340

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             V  +  S      V+QIA G+ H AV+T +                            
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSE-------------------------- 370

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 371 VFTWGKGANGRLGHGDIEDRKVPTTV---EALRDRAVR-HIACGANFTAAICLH 420


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + QIACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  R  S PQ+   L  I    ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GFELKRQSS-PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G  L  + SPQL+        + +A GGAH   LT     + G +
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  + GQLG  G       P+ +      +  I  I+ G+ HS  +S    +F+ G   
Sbjct: 108 WGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQ--IVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G + +  SSP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 HGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 121/249 (48%), Gaps = 25/249 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SL+ + +  +ACG  H LAL+      G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E+     P+ +    G  +  T ++AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPF--TQVAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN----- 264
           GQLG   +       P+    L    +  I+     ++A + + G +Y++G G N     
Sbjct: 272 GQLG--HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 329

Query: 265 -STSDVNCP 272
            STS+   P
Sbjct: 330 GSTSNRKSP 338


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 151/329 (45%), Gaps = 36/329 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG    GQLG G   +  +P  ++L + ++++ +A G  H LALTS      G V 
Sbjct: 109 AVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTS-----AGTVL 163

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG+G   +   P  V+   G   TIT ++AG  HS  V+ +G +   GD +
Sbjct: 164 AWGENLHGQLGNGGTTNMSTPVGVSLPAG--VTITAVAAGAFHSLAVTSTGAVLAWGDNS 221

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNV---HQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            GQLG+G     S+PV V       +        G  HSL L           +G+   G
Sbjct: 222 NGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTST---GAALAWGNNADG 278

Query: 212 QLGVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
           QLG      RS    V LP        + I  ++A G  S AL+A G +  WGR      
Sbjct: 279 QLGNGDTTNRSTPVDVDLPA------GVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQL 332

Query: 262 GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G  +T+  + P    LP+  + +  A G++  L LT  G V+  G +  G L + + ++ 
Sbjct: 333 GNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTINR 392

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           + P+ V L       GV +  +AAG +HS
Sbjct: 393 STPVDVDLPA-----GVTITAVAAGGQHS 416



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 165/386 (42%), Gaps = 56/386 (14%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           ++WG  +DGQLG G      +P  + L + ++++ +  GG H LALTS      G V +W
Sbjct: 59  FAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTST-----GAVLAW 113

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           GR  SGQLG+G+  +   P  V    G   TIT I+AG  HS  ++ +G +   G+   G
Sbjct: 114 GRNFSGQLGNGDTTNRSTPVDVDLPAG--TTITAIAAGAFHSLALTSAGTVLAWGENLHG 171

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           QLG+G   + S+PV VS      +  +A G  HSL +        V  +G    GQLG  
Sbjct: 172 QLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTST---GAVLAWGDNSNGQLGNG 228

Query: 217 KDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
                S    V LP    G     +    A    S AL++ G    WG       G   T
Sbjct: 229 TTTGSSTPVDVDLPA---GTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDT 285

Query: 267 SDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           ++ + P    LP+ ++ +  A G  H L LT  G V+  G +  G L +     S+ P+ 
Sbjct: 286 TNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVD 345

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V L       G  +  IAAG +                          F   +    A++
Sbjct: 346 VDLPT-----GATINAIAAGFD--------------------------FGLALTTAGAVV 374

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNL 410
            WG    GQLG G+T ++  P  V+L
Sbjct: 375 AWGRNVSGQLGNGDTINRSTPVDVDL 400



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 7/158 (4%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG   DGQLG G   +  +P  ++L +  +++ +A GG H LALT+      G V +WG
Sbjct: 271 AWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTA-----AGAVVAWG 325

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
           R  SGQLG+G    +  P  V    G   TI  I+AG++    ++ +G +   G    GQ
Sbjct: 326 RNVSGQLGNGTTTGSSTPVDVDLPTG--ATINAIAAGFDFGLALTTAGAVVAWGRNVSGQ 383

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           LG+GD  + S+PV V       +  +A G +HS+ L+ 
Sbjct: 384 LGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALVA 421



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 39/172 (22%)

Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDG 298
           SAA+ A    + WG       G  +T+  + P    LP+  + +    G  H L LT  G
Sbjct: 49  SAAIRASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTG 108

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            VL  G +  G L + +  + + P+ V L       G  +  IAAGA HS  +T      
Sbjct: 109 AVLAWGRNFSGQLGNGDTTNRSTPVDVDLPA-----GTTITAIAAGAFHSLALTSA---- 159

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                                   ++ WG   HGQLG G T +   P  V+L
Sbjct: 160 ----------------------GTVLAWGENLHGQLGNGGTTNMSTPVGVSL 189


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 177/414 (42%), Gaps = 102/414 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   +  ++  +ACG  H  A+T+      G+++
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    P+ ++   +G    I ++S G  H+  ++  G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG+FG LGHGD +S S P +V S        +ACG+ H+  +                  
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
                                  +E++       +S+A  + G L+TWG G         
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +     C  SL     F + A G +  + LT  G+V  +G S +G L +    S  RP
Sbjct: 284 KEARLKPTCVASL-IDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN--SDGRP 340

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             V  +  S      V+QIA G+ H AV+T +                            
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSE-------------------------- 370

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P  V   +  ++R  +  + CG+ FT AI  H
Sbjct: 371 VFTWGKGANGRLGHGDIEDRKVPTTV---EALRDRAVR-HIACGANFTAAICLH 420


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 101/193 (52%), Gaps = 11/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG  + GQLG G+    +S PQ +   S   +  ++ GG H  AL+     + G V
Sbjct: 137 QVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALS-----VSGSV 191

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG G+  D   P  V   +  +   T IS G +H+  ++  G +FT G G
Sbjct: 192 FGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKK--TTSISCGKDHTAILTKHGTVFTFGSG 249

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            FGQLGH   R+   P  V+      V +IACG  H+LVL ++   N++Y FG   + QL
Sbjct: 250 QFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQEN---NKIYSFGCNDQNQL 306

Query: 214 GVSKDRIRSVSLP 226
           G S D   SV LP
Sbjct: 307 GRSNDSHPSVPLP 319



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 106/248 (42%), Gaps = 48/248 (19%)

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
           P  + +F    V Q+ACG RH++ L K+    QVY +G   RGQLG+ K    S+S PQ 
Sbjct: 108 PRMLEAFCRIPVSQVACGSRHTVALTKE---GQVYTWGQNSRGQLGLGKKGC-SISSPQC 163

Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS 282
              L  + +V +SA GD S ALS  G ++ WGR      G   + D   P S+  SL+  
Sbjct: 164 VRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSV-DSLNLK 222

Query: 283 QA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
           +    + G +H  +LT  G V   G    G L      +  RP  VA      L G KV 
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVA-----ELWGAKVT 277

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
           +IA G  H+                           V+ EN  I ++G  +  QLG  N 
Sbjct: 278 RIACGRYHTL--------------------------VLQENNKIYSFGCNDQNQLGRSND 311

Query: 400 CDQIHPKV 407
               HP V
Sbjct: 312 S---HPSV 316



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 25/230 (10%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPK 116
           P++L       VS +ACG  H +ALT       G+V++WG+ S GQLG G+   ++  P+
Sbjct: 108 PRMLEAFCRIPVSQVACGSRHTVALTKE-----GQVYTWGQNSRGQLGLGKKGCSISSPQ 162

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V    G    +  +SAG +HS  +S SG +F  G    GQLG GD +   +P  V S  
Sbjct: 163 CVRSLSG--MPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLN 220

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHD 234
            K    I+CG  H+ +L K      V+ FGSG+ GQLG   S++ +R    P++   L  
Sbjct: 221 LKKTTSISCGKDHTAILTKH---GTVFTFGSGQFGQLGHNSSRNELR----PRLVAELWG 273

Query: 235 IEIVGISANGDRSAALSAEGHLYTW--------GRGFNSTSDVNCPQSLP 276
            ++  I+     +  L     +Y++        GR  +S   V  P  LP
Sbjct: 274 AKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPVLLP 323



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 42/201 (20%)

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN----------STS 267
           D  +++ LP++      I +  ++     + AL+ EG +YTWG+             S S
Sbjct: 100 DVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSIS 159

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              C +SL S +   Q + G +H   L+  G V   G +  G L   +      P S   
Sbjct: 160 SPQCVRSL-SGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTS--- 215

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
             V +L+  K   I+ G +H+A++T                          ++  + T+G
Sbjct: 216 --VDSLNLKKTTSISCGKDHTAILT--------------------------KHGTVFTFG 247

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G+ GQLG  ++ +++ P++V
Sbjct: 248 SGQFGQLGHNSSRNELRPRLV 268



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 42/204 (20%)

Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLV 293
           +I  +    D    LS +G +Y      + T  +  P+ L +   +  SQ A G  H + 
Sbjct: 76  KIEAVGCGDDEVILLSEKGSVYR----VDVTQALYLPRMLEAFCRIPVSQVACGSRHTVA 131

Query: 294 LTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           LT +G+V   G +  G L   ++  S + P     + V +L G+ ++Q++AG +HS    
Sbjct: 132 LTKEGQVYTWGQNSRGQLGLGKKGCSISSP-----QCVRSLSGMPLVQVSAGGDHS---- 182

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                   F +S +               ++  WG  + GQLGLG++ D+  P  V   D
Sbjct: 183 --------FALSVSG--------------SVFGWGRNDCGQLGLGDSQDRCTPTSV---D 217

Query: 413 EFQNRDTQLEVFCGSGFTYAISRH 436
               + T   + CG   T  +++H
Sbjct: 218 SLNLKKTT-SISCGKDHTAILTKH 240


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 50/327 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +  WG  S GQ G G  +  + P+P  +   H   +  ++ G NHS F+ + G ++TCG 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            T GQLGH      S P  + +   +++  +ACG  HS+ L       QV+ +G+G  GQ
Sbjct: 61  NTKGQLGHES--EGSKPEPIGALAGQHIVHVACGESHSVALSDQ---GQVFSWGAGSDGQ 115

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG++     +V++P++   L+   I+ IS       AL+A+G  +TWG+  NS   +   
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172

Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           +  PS  S            +Q A G  H   L+  G V   G +  G L   +      
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P  V L     L   KV+ I+ G EH+AV+T                          ++ 
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLT--------------------------KSG 261

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + T+G G  GQLG  +  D+++P+ V
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRV 288



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 156/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G G     +   PQ+       +V  +ACGG H + L        G+V++ 
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G  + GQLGH    +   P+P+    G    I H++ G +HS  +SD G +F+ G G+ G
Sbjct: 59  GLNTKGQLGHES--EGSKPEPIGALAGQH--IVHVACGESHSVALSDQGQVFSWGAGSDG 114

Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG        + P  +     + + QI+CG  H L L  D    Q + +G    GQLG+
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD---GQFFTWGQNSYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
            K+     S PQ    L  I +  ++A G  S ALS  G ++ WG+      G +   D 
Sbjct: 172 GKECPSQAS-PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230

Query: 270 N--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              C   L  S      + G  H  VLT  G V   G    G L          P     
Sbjct: 231 ESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +V  L G +V QIA G  H+              +++ P            +  I  +G
Sbjct: 286 RRVLELMGSEVSQIACGRHHT--------------LAFVP-----------SSGMIYAFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G+TC+   P  V 
Sbjct: 321 CGTRGQLGTGHTCNVKCPSPVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ SSGQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG  H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG     +   P+ +   +   +  +ACG +H +AL+       G+VF
Sbjct: 54  EVYTCGLNTKGQLGHES--EGSKPEPIGALAGQHIVHVACGESHSVALSD-----QGQVF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG   + DA+   P      ++ TI  IS G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLTTIEDAV-TVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G +  S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 YGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---SLSGAVFGWGKNSSGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +R R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDERDRES--PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    SQ A G +H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG  + GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    ++ I+ G +H+  FV  SG ++  G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 147/327 (44%), Gaps = 50/327 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +  WG  S GQ G G  +  + P+P  +   H   +  ++ G NHS F+ + G ++TCG 
Sbjct: 1   MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            T GQLGH      S P ++ +   +++  +ACG  HSL L       Q++ +G+G  GQ
Sbjct: 61  NTKGQLGHD--CEGSKPEQIGALAGQHIVHVACGESHSLALSDQ---GQLFSWGAGSDGQ 115

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG++     +V++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +   
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172

Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           +  PS  S            +Q A G  H   L+  G V   G +  G L   +      
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P  V L     L   KV+ I+ G EH+AV+T                          ++ 
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLT--------------------------KSG 261

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + T+G G  GQLG  +  D+++P+ V
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRV 288



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 155/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G G     +   PQ+       +V  +ACGG H + L        G+V++ 
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G  + GQLGH    +   P+ +    G    I H++ G +HS  +SD G LF+ G G+ G
Sbjct: 59  GLNTKGQLGHD--CEGSKPEQIGALAGQH--IVHVACGESHSLALSDQGQLFSWGAGSDG 114

Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG        + P  +     + + Q++CG  H L L  D    Q + +G    GQLG+
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAAD---GQFFTWGQNSYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
            K+     S PQ    L  I +  ++A G  S ALS  G ++ WG+      G +   D 
Sbjct: 172 GKECPSQAS-PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230

Query: 270 N--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              C   L  S      + G  H  VLT  G V   G    G L          P     
Sbjct: 231 ESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +V  L G +V QIA G  H+              +++ P            +  I  +G
Sbjct: 286 RRVLELMGSEVSQIACGRHHT--------------LAFVP-----------SSGMIYAFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G+TC+   P  V 
Sbjct: 321 CGTRGQLGTGHTCNVKCPSPVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ SSGQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG  H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 136/289 (47%), Gaps = 27/289 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHD--ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++ G  T GQLG    HD     P+ +   +   +  +ACG +H LAL+       G+
Sbjct: 54  EVYTCGLNTKGQLG----HDCEGSKPEQIGALAGQHIVHVACGESHSLALSD-----QGQ 104

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +FSWG GS GQLG   + DA+   P      ++ TI  +S G  H   ++  G  FT G 
Sbjct: 105 LFSWGAGSDGQLGLTTIEDAV-TVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ 163

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            ++GQLG G +  S +SP +V S     + Q+A G  HS  L    L   V+G+G    G
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---SLSGAVFGWGKNSSG 220

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG+S +R R    P     L   ++V IS   + +A L+  G ++T+G       G +S
Sbjct: 221 QLGLSDERDRES--PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS 278

Query: 266 TSDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
            +D   P+ +   +    SQ A G +H L      G +   G    G L
Sbjct: 279 MNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG  + GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    ++ I+ G +H+  FV  SG ++  G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 169/408 (41%), Gaps = 57/408 (13%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           W  G  G + +        PQ     S  S+  +ACGG H + L        G+V++ G 
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLE-----DGEVYTCGS 61

Query: 99  GSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ GQ
Sbjct: 62  NTKGQLGHER--EGNKPEQIGALADQH---IVHVACGESHSLALSDQGQLFSWGAGSDGQ 116

Query: 158 LGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           LGH     S + P  +     + + Q++CG  H + L  D    Q + +G  + GQLG+ 
Sbjct: 117 LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAAD---GQFFTWGQNRHGQLGLG 173

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
           K+   S + PQ    L  I +  ++A G  S ALS  G ++ WGR      G +  +D  
Sbjct: 174 KE-FPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ 232

Query: 271 --CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
             C   L  +      + G  H  VLT  G V   G    G L          P      
Sbjct: 233 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNP-----R 287

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L G +V QIA G +H+              +++ P            +  I  +G 
Sbjct: 288 RVLELMGSEVTQIACGRQHT--------------LAFVP-----------SSGLIYAFGC 322

Query: 389 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G  GQLG G+TC+   P  V     +   + QL     S F Y I +H
Sbjct: 323 GARGQLGTGHTCNVKCPSPVK--GHWAAHNGQLSSRADS-FKYHIVKH 367



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 94/182 (51%), Gaps = 10/182 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG    GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 158 QFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS-----LSGAV 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 213 FGWGRNNAGQLGLSDETDRQSPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +FGQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 271 SFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 328

Query: 214 GV 215
           G 
Sbjct: 329 GT 330



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 266

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 325 RGQLGTG----HTCNVKCPSPVK 343


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score =  114 bits (284), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 105/216 (48%), Gaps = 24/216 (11%)

Query: 45  GQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQL 104
           GQLG     +   P  L +        +ACG +H +ALT       G++F+WG+ + GQL
Sbjct: 319 GQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTD-----NGQIFTWGKNTRGQL 373

Query: 105 GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
           G G   D L P  +          T I +G  HS F+SD   L+T G+G + +LGHG   
Sbjct: 374 GQGHRNDQLKPTMIII----EVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTT 429

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
               P KV    +  V  ++CGM H+L +  +     VY +G G  G+LGV ++  +S+ 
Sbjct: 430 DELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGF---VYAWGDGMSGKLGVQENN-KSLH 485

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           LP             +SA G  S AL+ +G LY+WG
Sbjct: 486 LP-----------TRVSAGGLHSMALTDQGILYSWG 510



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 26/196 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG  T GQLG G  +D+L P ++ +  +++     C G    A  S       +++
Sbjct: 361 QIFTWGKNTRGQLGQGHRNDQLKPTMIIIEVMATS---ICSGDQHSAFISDEK----ELY 413

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G   +LGHG   D LYPK V   +     +TH+S G  H+  +++ G ++  GDG 
Sbjct: 414 TWGNGQYFRLGHGVTTDELYPKKVVVLED--VYVTHVSCGMTHTLAITNEGFVYAWGDGM 471

Query: 155 FGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            G+LG   + +S   P +VS+           G  HS+ L    +   +Y +GS K G L
Sbjct: 472 SGKLGVQENNKSLHLPTRVSA-----------GGLHSMALTDQGI---LYSWGSSKGGVL 517

Query: 214 GV--SKDRIRSVSLPQ 227
           G+   +D     SLPQ
Sbjct: 518 GIGFQRDNKDCYSLPQ 533



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 53/242 (21%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT---------------------FGQLGHGDYRSH 166
           I H+S G +H+  ++D G +F  G GT                      GQLG+ ++ + 
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS--KDRIRSVS 224
             P ++  +  +   Q+ACG  HS+ L  +    Q++ +G   RGQLG     D+++   
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTDN---GQIFTWGKNTRGQLGQGHRNDQLK--- 383

Query: 225 LPQVTIGLHDIEIVGIS-ANGDR-SAALSAEGHLYTWGR------GFNSTSDVNCPQSLP 276
            P + I    IE++  S  +GD+ SA +S E  LYTWG       G   T+D   P+ + 
Sbjct: 384 -PTMII----IEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVV 438

Query: 277 --SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD---------PERVSSTRPLSV 325
               +  +  + G  H L +T +G V   G    G L           P RVS+    S+
Sbjct: 439 VLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPTRVSAGGLHSM 498

Query: 326 AL 327
           AL
Sbjct: 499 AL 500



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 24/156 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G   +LG G   DEL P+ + +     V+ ++CG  H LA+T+      G V+
Sbjct: 411 ELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNE-----GFVY 465

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G SG+LG  E   +L+              T +SAG  HS  ++D G L++ G   
Sbjct: 466 AWGDGMSGKLGVQENNKSLHLP------------TRVSAGGLHSMALTDQGILYSWGSSK 513

Query: 155 FGQLGHGDYRS----HSSPVK---VSSFVNKNVHQI 183
            G LG G  R     +S P K   V+   +KN  QI
Sbjct: 514 GGVLGIGFQRDNKDCYSLPQKIRTVAKIQSKNPKQI 549



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 109/272 (40%), Gaps = 67/272 (24%)

Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
           RS+ +  +++  +   +  ++CG  H+LV+        ++ FG G +G+L +        
Sbjct: 254 RSYVNKTEINEEIKDGIKHVSCGHHHTLVITDQ---GTIFYFGMGTQGKLFL-------- 302

Query: 224 SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQ 283
                   L + +++  + +  +   L  E  +      +  T  +  P+       F Q
Sbjct: 303 --------LRECQLLLQNKSKIQKGQLGNENFVNV----YEPTELLVWPKR-----KFIQ 345

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A G +H + LT +G++   G +  G L    R    +P  + +E       V    I +
Sbjct: 346 VACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMIIIE-------VMATSICS 398

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI 403
           G +HSA                           I++ + + TWG G++ +LG G T D++
Sbjct: 399 GDQHSAF--------------------------ISDEKELYTWGNGQYFRLGHGVTTDEL 432

Query: 404 HP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           +P KVV L D +        V CG   T AI+
Sbjct: 433 YPKKVVVLEDVYVT-----HVSCGMTHTLAIT 459



 Score = 47.4 bits (111), Expect = 0.015,   Method: Composition-based stats.
 Identities = 68/326 (20%), Positives = 118/326 (36%), Gaps = 98/326 (30%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELS------PQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
            ++W++G    G LG    HDE +      P+++N   +  +  LA G   ++A+T     
Sbjct: 863  EIWTFGTSDSGVLG----HDEKNYYVVSEPKMIN--DIPPMIFLASGPQGMMAITEQKR- 915

Query: 89   IGGKVFSWGRGSSGQLG------------HGEMVDA------------------------ 112
               ++++WG    GQLG             G  +D                         
Sbjct: 916  ---QIYAWGNNLYGQLGIQITNNNMNMNQFGPDIDIDDSQDEIKQKEKKIDLDEQNKKIT 972

Query: 113  ----LY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167
                +Y P+ V   +  +  I  I  G  HS  + D G L++CG   F  L     +   
Sbjct: 973  KNQIIYKPQKVKIENDRKIQIRQIGMGMFHSVAIDDLGHLYSCGLRKFSGLAESLSKEGL 1032

Query: 168  SP-------VKVSSFVNKNVHQIACGMRHSLVLLKDCLG---NQVYGFGSGKRGQLGVSK 217
            S        +K    +N    Q++    H+L L +D  G   N V+G+G    G L +  
Sbjct: 1033 SGFDDTFIYLKKDHMLNHQFQQVSVSEYHTLALTQDQTGEFNNVVFGWGLCNLGNLCLKD 1092

Query: 218  DRIRSVSLPQVTIGLHDIE--------------------------IVGISANGDRSAALS 251
             +    ++  +   + D +                          IV ISA    + A++
Sbjct: 1093 QKEIQQAMKDMKYQMKDFDLNEPLKEMFTLPINLTQINKFKDCDNIVYISAGLMHNLAMN 1152

Query: 252  AEGHLYTWGRGFN-----STSDVNCP 272
              G +++WG   N     ST+++N P
Sbjct: 1153 KNGKVFSWGSFQNGRLGISTTNLNLP 1178


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 172/404 (42%), Gaps = 57/404 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G     LSP  + +  L+ V  L+ GG H LA+ +      G V+
Sbjct: 166 TVWAWGDNASGQLGDGTATRRLSP--VQVPGLTDVVALSAGGYHSLAVRTD-----GTVW 218

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG   SGQLG G     L P  V+        +  +SA  +++  +   G ++  G  +
Sbjct: 219 AWGSNFSGQLGDGTATPRLSPVQVSGLT----NVVALSADDSYTLALRTDGTVWAWGYNS 274

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G      SPV+V      NV  ++ G  HSL L  D     V+ +G    GQLG
Sbjct: 275 YGQLGDGTTTPRLSPVQVPGL--TNVVALSAGYSHSLALRTD---GTVWAWGYNYNGQLG 329

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 RS S+P    GL  I++V +SA    S AL  +G ++ WG       G  +T  
Sbjct: 330 NGIPTQRSPSIP--VFGL--IDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIP 385

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +P        + G +H L L  DG V   G ++ G L D        P+ V   
Sbjct: 386 RPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVP-- 443

Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTGKFHWV-------RLFIISYTPFFPPF----FINV 376
                D   V+ ++AG  H+ A+ T    W        +L   + TP   P       NV
Sbjct: 444 -----DLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLGLTNV 498

Query: 377 IA------ENRAIMT----WGWGE--HGQLGLGNTCDQIHPKVV 408
           +A       + A+ T    W WG    GQLG G T  ++ P  V
Sbjct: 499 VALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQV 542



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 166/404 (41%), Gaps = 63/404 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G     L+P  + +  L+ V  L+ G  H LAL +      G V+
Sbjct: 116 TVWAWGYNFYGQLGDGTTTPRLAP--VQVPGLTDVVALSSGIYHSLALRTD-----GTVW 168

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  +SGQLG G     L P  V         +  +SAG  HS  V   G ++  G   
Sbjct: 169 AWGDNASGQLGDGTATRRLSPVQVPGLT----DVVALSAGGYHSLAVRTDGTVWAWGSNF 224

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
            GQLG G      SPV+VS     NV  ++    ++L L  D     V+ +G    GQL 
Sbjct: 225 SGQLGDGTATPRLSPVQVSGL--TNVVALSADDSYTLALRTD---GTVWAWGYNSYGQLG 279

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
            G +  R+  V +P +T       +V +SA    S AL  +G ++ WG  +N       P
Sbjct: 280 DGTTTPRLSPVQVPGLT------NVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIP 333

Query: 273 -QSLPSSLSFS-----QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            Q  PS   F        + G++H L L  DG V   G +  G L D   +    P+ V 
Sbjct: 334 TQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVP 393

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY-------------TPFFPPFF 373
                  D   V+ ++AG  HS  +      VR + ++Y             +P   P  
Sbjct: 394 -------DLTDVVALSAGDSHSLALRTDGT-VRAWGVNYSGQLGDGTTTHRLSPVQVPDL 445

Query: 374 INVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            +V+A             N  +  WG    GQLG G T  ++ P
Sbjct: 446 TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSP 489



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 143/322 (44%), Gaps = 37/322 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG  + GQLG G      SP  + +  L+ V  L+ G +H LAL +      G V 
Sbjct: 366 TVWAWGYNSLGQLGDGTTIPRPSP--VQVPDLTDVVALSAGDSHSLALRTD-----GTVR 418

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG   SGQLG G     L P  V         +  +SAG NH+  +  +G ++  G  +
Sbjct: 419 AWGVNYSGQLGDGTTTHRLSPVQVPDLT----DVVALSAGGNHTLALRTNGTVWAWGSNS 474

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
            GQLG G      SPV++      NV  ++ G  HSL +  D     V+ +GS   GQL 
Sbjct: 475 DGQLGDGTTTPRLSPVQMLGL--TNVVALSAGYYHSLAVHTD---GTVWAWGSNSDGQLG 529

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            G +  R+  V +P +T      ++V +SA    S AL  +G ++ WG       G  +T
Sbjct: 530 DGTTTHRLTPVQVPGLT------DVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTT 583

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +    P  +P        + G  H L L  DG V   G +++G L D        P+   
Sbjct: 584 TPRGSPVQVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPV--- 640

Query: 327 LEKVSNLDGVKVIQIAAGAEHS 348
              VSNL G     + AGA HS
Sbjct: 641 --LVSNLTGTS--NLYAGAGHS 658



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 178/411 (43%), Gaps = 62/411 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+ + GQLG G      SP  + +  L+ V  L+ G  H LAL +      G V+
Sbjct: 16  TVWAWGSNSSGQLGDGTTTPRGSP--VQVPGLTDVVALSAGNHHCLALRTD-----GTVW 68

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  SSGQLG G     L    V         +  +SAG +++  +   G ++  G   
Sbjct: 69  AWGSNSSGQLGDGTTTPRLSSVQVPGLT----DVVALSAGSSYTLALRTDGTVWAWGYNF 124

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
           +GQLG G      +PV+V      +V  ++ G+ HSL L  D     V+ +G    GQL 
Sbjct: 125 YGQLGDGTTTPRLAPVQVPGL--TDVVALSSGIYHSLALRTD---GTVWAWGDNASGQLG 179

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVN 270
            G +  R+  V +P +T      ++V +SA G  S A+  +G ++ WG  F+        
Sbjct: 180 DGTATRRLSPVQVPGLT------DVVALSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTA 233

Query: 271 CPQSLPSSLS--FSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            P+  P  +S   +  AL  +  + L L  DG V   G + +G L D        P+ V 
Sbjct: 234 TPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQV- 292

Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHWVRLF----------IISYTPFFPPF-FI 374
              ++N     V+ ++AG  HS A+ T    W   +              +P  P F  I
Sbjct: 293 -PGLTN-----VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGLI 346

Query: 375 NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGD 412
           +V+A             +  +  WG+   GQLG G T  +  P +V +L D
Sbjct: 347 DVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVPDLTD 397



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 177/413 (42%), Gaps = 66/413 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+ + GQLG G     LS   + +  L+ V  L+ G ++ LAL +      G V+
Sbjct: 66  TVWAWGSNSSGQLGDGTTTPRLSS--VQVPGLTDVVALSAGSSYTLALRTD-----GTVW 118

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G     L P  V         +  +S+G  HS  +   G ++  GD  
Sbjct: 119 AWGYNFYGQLGDGTTTPRLAPVQVPGLT----DVVALSSGIYHSLALRTDGTVWAWGDNA 174

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
            GQLG G      SPV+V      +V  ++ G  HSL +  D     V+ +GS   GQL 
Sbjct: 175 SGQLGDGTATRRLSPVQVPGL--TDVVALSAGGYHSLAVRTD---GTVWAWGSNFSGQLG 229

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            G +  R+  V +  +T       +V +SA+   + AL  +G ++ WG       G  +T
Sbjct: 230 DGTATPRLSPVQVSGLT------NVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTT 283

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--PERVSSTRPLS 324
           +    P  +P   +    + G++H L L  DG V   G +++G L +  P + S + P+ 
Sbjct: 284 TPRLSPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPV- 342

Query: 325 VALEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHWVRLF-----------IISYTPFFPPF 372
                      + V+ ++AG  HS A+ T    W   +           I   +P   P 
Sbjct: 343 --------FGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVPD 394

Query: 373 FINVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGD 412
             +V+A             +  +  WG    GQLG G T  ++ P +V +L D
Sbjct: 395 LTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTD 447



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 133/310 (42%), Gaps = 50/310 (16%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           ++AG++HS  +   G ++  G  + GQLG G      SPV+V      +V  ++ G  H 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGL--TDVVALSAGNHHC 58

Query: 191 LVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           L L  D     V+ +GS   GQL  G +  R+ SV +P +T      ++V +SA    + 
Sbjct: 59  LALRTD---GTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLT------DVVALSAGSSYTL 109

Query: 249 ALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
           AL  +G ++ WG  F       +T+    P  +P        + G  H L L  DG V  
Sbjct: 110 ALRTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDVVALSSGIYHSLALRTDGTVWA 169

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHWV--- 358
            G +  G L D    ++TR LS    +V  L    V+ ++AG  HS AV T    W    
Sbjct: 170 WGDNASGQLGDG---TATRRLSPV--QVPGL--TDVVALSAGGYHSLAVRTDGTVWAWGS 222

Query: 359 ----RLFIISYTPFFPPF----FINVIA------------ENRAIMTWGWGEHGQLGLGN 398
               +L   + TP   P       NV+A             +  +  WG+  +GQLG G 
Sbjct: 223 NFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGT 282

Query: 399 TCDQIHPKVV 408
           T  ++ P  V
Sbjct: 283 TTPRLSPVQV 292



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 83/180 (46%), Gaps = 16/180 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+ +DGQLG G     L+P  + +  L+ V  L+ G +H LAL +      G V+
Sbjct: 516 TVWAWGSNSDGQLGDGTTTHRLTP--VQVPGLTDVVALSAGDSHSLALRTD-----GTVW 568

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  SS QLG G       P  V         +  +SAG  HS  +   G ++  G   
Sbjct: 569 AWGSNSSSQLGDGTTTPRGSPVQVPGLT----DVVALSAGGAHSLALRTDGTVWAWGSNY 624

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G       PV VS+    +   +  G  HSL L  D  G     +G+   GQLG
Sbjct: 625 YGQLGDGTTTPRLFPVLVSNLTGTS--NLYAGAGHSLALRTDGTGRA---WGNNYGGQLG 679



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 140/351 (39%), Gaps = 45/351 (12%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           +A G +H LAL +      G V++WG  SSGQLG G       P  V         +  +
Sbjct: 1   MAAGYSHSLALHTD-----GTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLT----DVVAL 51

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           SAG +H   +   G ++  G  + GQLG G      S V+V      +V  ++ G  ++L
Sbjct: 52  SAGNHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGL--TDVVALSAGSSYTL 109

Query: 192 VLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
            L  D     V+ +G    GQL  G +  R+  V +P +T      ++V +S+    S A
Sbjct: 110 ALRTD---GTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLT------DVVALSSGIYHSLA 160

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L  +G ++ WG       G  + +    P  +P        + G  H L +  DG V   
Sbjct: 161 LRTDGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAW 220

Query: 304 GGSHHGMLSDPERVSSTRPLSVA-LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
           G +  G L D        P+ V+ L  V  L       +A   + +    G   + +L  
Sbjct: 221 GSNFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGD 280

Query: 363 ISYTPFFPPF----FINVIA------------ENRAIMTWGWGEHGQLGLG 397
            + TP   P       NV+A             +  +  WG+  +GQLG G
Sbjct: 281 GTTTPRLSPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG 331



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 11/138 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+ +  QLG G      SP  + +  L+ V  L+ GGAH LAL +      G V+
Sbjct: 566 TVWAWGSNSSSQLGDGTTTPRGSP--VQVPGLTDVVALSAGGAHSLALRTD-----GTVW 618

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G     L+P  V+   G     +++ AG  HS  +   G     G+  
Sbjct: 619 AWGSNYYGQLGDGTTTPRLFPVLVSNLTG----TSNLYAGAGHSLALRTDGTGRAWGNNY 674

Query: 155 FGQLGHGDYRSHSSPVKV 172
            GQLG G       PV+V
Sbjct: 675 GGQLGDGTSAFFLHPVQV 692


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 135/292 (46%), Gaps = 32/292 (10%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-----VSMLACG---GAHVLALTSPSS 87
            V + G G+ G+LG G   D     L +L+++SS     V+ LA       H LA+T    
Sbjct: 1852 VLACGEGSYGRLGQGNSDD-----LHSLTAISSIQGFVVTQLATSVGSDGHTLAVTE--- 1903

Query: 88   VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G+VFSWG G  G+LGHG       P+ +    G    +  +S G+ HS  V+  G L
Sbjct: 1904 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VIQLSCGFKHSAVVTADGKL 1959

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            FT G+G +G+LG G   +   P +V +  +  +  +ACG+ H+L +  D  G  V+ FG 
Sbjct: 1960 FTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSAD--GTNVWAFGD 2017

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            G  G+LG  +       LP     L    I  ++     S ALS  G ++TWG+      
Sbjct: 2018 GDFGKLG--QGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQ 2075

Query: 264  -NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
             ++    NC     +SLS         G  H LVLT DG+V   G +  G L
Sbjct: 2076 PDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQL 2127



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  L+CG  H   +T+      GK+F
Sbjct: 1906 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTA-----DGKLF 1960

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDG 153
            ++G G  G+LG G   +   P  V   + H+  I +++ G NH+  VS  G  ++  GDG
Sbjct: 1961 TFGNGDYGRLGLGTTTNKKVPTRVVALESHQ--IGYVACGLNHTLCVSADGTNVWAFGDG 2018

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG--FGSGKRG 211
             FG+LG G+      P K+ +     + ++ACG + S+ L K       YG  F  G+  
Sbjct: 2019 DFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSK-------YGKVFTWGQER 2071

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------N 264
             +G    R  S   PQ    L    I  +    + +  L+++G ++ WG          +
Sbjct: 2072 LIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGH 2131

Query: 265  STSDVNCPQSLP 276
            + S V  PQ +P
Sbjct: 2132 TNSPVREPQLVP 2143



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 163/371 (43%), Gaps = 59/371 (15%)

Query: 81   ALTSPSS-VIGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
            A+  P   +IGGK   F WG G +GQ+  G    A  P  V  F   +     I  G N 
Sbjct: 1788 AMQKPEDWLIGGKCEAFLWGSGRNGQMCEGGR-GAFVPVRVPSFSCSQ----QIVCGQNC 1842

Query: 138  SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLL 194
            +  V ++G +  CG+G++G+LG G+     S   +SS     V Q+A  +    H+L + 
Sbjct: 1843 TFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVT 1902

Query: 195  KDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
            +     +V+ +G G  G+LG  + DR R    P+    L   E++ +S     SA ++A+
Sbjct: 1903 E---SGEVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVIQLSCGFKHSAVVTAD 1956

Query: 254  GHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG-EVLMLG 304
            G L+T+G       G  +T++   P  + +  S      A G NH L ++ DG  V   G
Sbjct: 1957 GKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFG 2016

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--GK-FHWVRLF 361
                G L     V    P      K+  L G  + ++A G + S  ++  GK F W +  
Sbjct: 2017 DGDFGKLGQGNTVGKHLPT-----KIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQER 2071

Query: 362  II-------------SYTPFFPPFFINVI---AENRAIMT-----WGWGEH--GQLGLGN 398
            +I                     +FI  +   AE+  ++T     WGWG +  GQLGLG+
Sbjct: 2072 LIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGH 2131

Query: 399  TCDQIH-PKVV 408
            T   +  P++V
Sbjct: 2132 TNSPVREPQLV 2142



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 98/264 (37%), Gaps = 81/264 (30%)

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            F  G G  GQ+  G  R    PV+V SF      QI CG   + V+  +     V   G 
Sbjct: 1804 FLWGSGRNGQMCEGG-RGAFVPVRVPSFSCS--QQIVCGQNCTFVVQNN---GTVLACGE 1857

Query: 208  GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
            G  G+LG                            N D   +L+A   +    +GF  T 
Sbjct: 1858 GSYGRLG--------------------------QGNSDDLHSLTAISSI----QGFVVTQ 1887

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
                       L+ S  + G  H L +T  GEV   G   +G L         RP     
Sbjct: 1888 -----------LATSVGSDG--HTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRP----- 1929

Query: 328  EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
             ++  L G +VIQ++ G +HSAVVT                           +  + T+G
Sbjct: 1930 RQIEALQGEEVIQLSCGFKHSAVVTA--------------------------DGKLFTFG 1963

Query: 388  WGEHGQLGLGNTCDQIHP-KVVNL 410
             G++G+LGLG T ++  P +VV L
Sbjct: 1964 NGDYGRLGLGTTTNKKVPTRVVAL 1987


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 37/300 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P++++  S S+V ++ACG  H  A+T     + G ++
Sbjct: 318 QIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVT-----VSGNLY 372

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +WG  +  +G LGHG  V    P+ V         I+ +S G  H+  VS  G LFT GD
Sbjct: 373 TWGDDTHNTGYLGHGSAVSHWIPREV-IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGD 431

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL---------LKDCLGNQVY 203
           GTFG LGHGD  S S P +V S       +++CG+ H+  +         L   L  +++
Sbjct: 432 GTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLF 491

Query: 204 GFGSGKRGQLGVSKDRIR----SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +G+G+RGQLG   +  R     VS+P          +  ++     + AL+  G +YT 
Sbjct: 492 TWGAGERGQLGHGDEEPRLVPSCVSMP--------AGVCQVACAHSMTIALTVLGQVYTM 543

Query: 260 GRGFNSTSDVNCPQ-SLP-------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G          C    LP        +    Q A G +HV+ L+ +G+V   G   +G L
Sbjct: 544 GAADYGQLGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQL 603



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 170/404 (42%), Gaps = 68/404 (16%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L+  +     ++ACG  H + +T       G++FSWG  S G+LGHG   D  
Sbjct: 285 DALLPKALDRIAALDAQIIACGSKHAVIVTK-----QGQIFSWGESSGGKLGHGADADVS 339

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
            PK +         +  ++ G  H+  V+ SG L+T GD T   G LGHG   SH  P +
Sbjct: 340 QPKVIDALS--ESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPRE 397

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG------VSKDR----I 220
           V   +    +  ++CG  H+  +       +++ FG G  G LG       SK R    +
Sbjct: 398 VIGQIESVRISFVSCGPWHTAAVSSQ---GKLFTFGDGTFGALGHGDRSSTSKPREVESL 454

Query: 221 RSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSDVNCPQSLP 276
           + +   +V+ G+ H   ++      DR    S  G L+TWG   RG     D   P+ +P
Sbjct: 455 KGLRTLKVSCGIWHTAAVIDFINESDR-LDTSLSGKLFTWGAGERGQLGHGDEE-PRLVP 512

Query: 277 SSLSF----SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
           S +S      Q A   +  + LT  G+V  +G + +G L  P  V       + +    +
Sbjct: 513 SCVSMPAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVG-----KLPIHTDGD 567

Query: 333 LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHG 392
           +    + QIA G+ H                          +  ++ N  + TWG G +G
Sbjct: 568 IRNCHIKQIACGSHH--------------------------VVALSSNGDVYTWGKGING 601

Query: 393 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           QLG G+  D+  P +V      Q +     V CGS FT  I  H
Sbjct: 602 QLGHGDIKDRHTPTLVKALKHKQVK----SVVCGSNFTAVICPH 641


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 25/327 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ +G+   GQLG G       P  +       V  +ACG  H +  +       GK+F
Sbjct: 58  RLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSE-----SGKLF 112

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G    GQLGH +  + L PK +      +  I  I+ G  HS  +S+ G ++  G+  
Sbjct: 113 SFGCNEDGQLGHVDKENELLPKEIESIP--QMEIKQIACGTYHSIILSEDGDVYVWGNNN 170

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G+   +S P K+     K V  ++CG  H+ ++ +D     +Y FG  + G+LG
Sbjct: 171 EGQLGLGEEVENSLPKKLK--FKKEVVSVSCGYYHTALVTRDGF---LYTFGENELGKLG 225

Query: 215 VSKDRIRSVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------ST 266
           +S  ++ + ++PQ V +   + E + +S     + A++ +GH Y WG G           
Sbjct: 226 LSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKL 285

Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            +VN P+ +   S       + G +H  V+T  G+V   G   HG L   E   S     
Sbjct: 286 LEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDP 345

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVV 351
           V L   S  +   V+ ++ G  H+ V+
Sbjct: 346 VYL---SRFNYFNVVYVSCGGCHTLVL 369



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 149/341 (43%), Gaps = 57/341 (16%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H   +T       G+++ +G    GQLG G       P  V      +  +
Sbjct: 40  VVEMACGDEHSAVVTE-----SGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK--V 92

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
             ++ G NH+   S+SG LF+ G    GQLGH D  +   P ++ S     + QIACG  
Sbjct: 93  RKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTY 152

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           HS++L +D     VY +G+   GQLG+ ++     SLP+        E+V +S     +A
Sbjct: 153 HSIILSED---GDVYVWGNNNEGQLGLGEEVEN--SLPKKL--KFKKEVVSVSCGYYHTA 205

Query: 249 ALSAEGHLYTWGR------GFNST--SDVNCPQS--LPS-SLSFSQAALGWNHVLVLTGD 297
            ++ +G LYT+G       G +S+  S+   PQS  +P+ +  +   + G  H + +T  
Sbjct: 206 LVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQ 265

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGAEHSAVVTGKFH 356
           G     G    G L        T+ L V   K +  L G K I ++ G  H+AVVT    
Sbjct: 266 GHCYAWGDGSQGQLG-----HGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVT---- 316

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG 397
                                 E+  + T+G G HG+LG G
Sbjct: 317 ----------------------ESGKVFTFGDGRHGKLGQG 335



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 110/283 (38%), Gaps = 60/283 (21%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++S+G   DGQLG     +EL P+ +       +  +ACG  H + L+       G V+
Sbjct: 110 KLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSE-----DGDVY 164

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTF------------------FDGHRYTI-------- 128
            WG  + GQLG GE V+   PK + F                   DG  YT         
Sbjct: 165 VWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKL 224

Query: 129 -------------------------THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-D 162
                                      +S G  H+  ++  G  +  GDG+ GQLGHG  
Sbjct: 225 GLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTK 284

Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
               + P ++     +    ++CG  H+ V+ +     +V+ FG G+ G+LG  +D   +
Sbjct: 285 LLEVNEPKQIKKLSGQKCISVSCGESHTAVVTE---SGKVFTFGDGRHGKLGQGEDSFSN 341

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
              P      +   +V +S  G  +  L+   +   +  G NS
Sbjct: 342 SFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVDGENS 384



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 133/309 (43%), Gaps = 63/309 (20%)

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           + D G +FT     FG+    D  ++   +K     N  V ++ACG  HS V+ +     
Sbjct: 11  IPDLGAVFT-----FGKSKFADNIANKFWIK-----NDGVVEMACGDEHSAVVTE---SG 57

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           ++Y FGS   GQLG+     +S++ P     L   ++  ++   + +   S  G L+++G
Sbjct: 58  RLYVFGSNDWGQLGLG--HTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFG 115

Query: 261 ------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                  G     +   P+ + S   +   Q A G  H ++L+ DG+V + G ++ G L 
Sbjct: 116 CNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLG 175

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             E V ++ P  +  +K       +V+ ++ G  H+A+VT                    
Sbjct: 176 LGEEVENSLPKKLKFKK-------EVVSVSCGYYHTALVT-------------------- 208

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
                  +  + T+G  E G+LGL ++   +   P+ V +     + D  + V CG+  T
Sbjct: 209 ------RDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMP---ADNDEYISVSCGARHT 259

Query: 431 YAISR--HC 437
            AI++  HC
Sbjct: 260 VAITKQGHC 268


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 158/378 (41%), Gaps = 54/378 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G    G
Sbjct: 59  GCNDLGQLGHEKSRKR--PEQVGALDAQ--NIVTVSCGEAHTLALNDKGQVYAWGFAVDG 114

Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG      ++  P  + S  +  + Q+ACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSK---GSEVFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S PQ+   L  I    I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GYEYKKQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S      + G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P            I ++G
Sbjct: 286 RKVFELMGNIVTQIACGRQHTSA-----------------FVP--------STGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHP 405
            G +GQLG+G T ++  P
Sbjct: 321 LGGNGQLGMGTTSNRKSP 338



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+  +FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKK--VQDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKRPEQVGALDAQNIVTVSCGEAHTLALNDK---GQVYAWGFAVD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+S        +P+    L DI+IV ++     S ALS    +++WG+        G
Sbjct: 114 GQLGLSGTE-EYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
           +      + PQ + S L   F+Q A G  H  VLT  G V   G +  G L   +     
Sbjct: 173 YEYKKQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I+ G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYISCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTAHEINPRKV 288



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 92/193 (47%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     + SPQ++        + +A GGAH   LT     + G V
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLT-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +IS G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYISCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPST--GRIYSFGLGGNGQL 327

Query: 214 GVSKDRIRSVSLP 226
           G+     R    P
Sbjct: 328 GMGTTSNRKSPFP 340



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 15/268 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
           +V++WG   DGQLG     +E +    N+ SLS + ++  ACG  H LAL+      G +
Sbjct: 104 QVYAWGFAVDGQLGLSGT-EEYTRVPRNIKSLSDIQIVQVACGYFHSLALSK-----GSE 157

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG+   GQLG G E      P+ +    G  +    I+AG  HS  ++ SG +F  G
Sbjct: 158 VFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPF--AQIAAGGAHSFVLTLSGAVFGWG 215

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              FGQLG  D      P  + S  ++ +  I+CG  H+  L K+     V+ FG+G  G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE---GGVFTFGAGGYG 272

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG        ++  +V   + +I           SA + + G +Y++G G N    +  
Sbjct: 273 QLG-HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGT 331

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGE 299
             +  S        L +N  + L  DGE
Sbjct: 332 TSNRKSPFPVKGNWLPYNGQIPLNSDGE 359


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 158/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + QIACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  R  S PQ+   L  I    ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GFELKRQSS-PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                           +  +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAF-------------------------VPSSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G  L  + SPQL+        + +A GGAH   LT     + G +
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  + GQLG  G       P+ +      +  I  I+ G+ HS  +S    +F+ G   
Sbjct: 108 WGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQ--IVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G + +  SSP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 HGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SL+ + +  +ACG  H LAL+      G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E+     P+ +    G  +  T ++AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPF--TQVAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 151/327 (46%), Gaps = 31/327 (9%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACG---GAHVLALTSPSSVIG 90
            V S G G+ G+LG G   D  S +L ++S+L    V  LA       H +ALT       
Sbjct: 801  VLSCGEGSYGRLGQGNSDD--SNRLTHISALQGFIVKQLATSTGSDGHAIALTE-----N 853

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G+VFSWG G  G+LGHG       P+ +    G    +  ++ G+ HS  V+  G LFT 
Sbjct: 854  GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQE--VVQVACGFKHSAVVTIDGKLFTF 911

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G G +G+LGHG   +   P +V +  N  + Q+ACG+ H++++ +D L   V+  G G  
Sbjct: 912  GYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNL--TVWACGDGDY 969

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------N 264
            G+LG+     ++   P     L  + I  IS     +AAL+ +G L+ +G+         
Sbjct: 970  GKLGIGGTSAKTS--PTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCET 1027

Query: 265  STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             TS    PQ +   SS      ++G  H + LT  G V   G +  G L          P
Sbjct: 1028 RTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEP 1087

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSA 349
                   V +L G  + QI+AG  HSA
Sbjct: 1088 -----TLVESLSGKNIRQISAGRTHSA 1109



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 145/311 (46%), Gaps = 31/311 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  +ACG  H   +T     I GK+F
Sbjct: 855  EVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVT-----IDGKLF 909

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
            ++G G  G+LGHG   +   P+ V   +   Y I  ++ G NH+  VS D+  ++ CGDG
Sbjct: 910  TFGYGDYGRLGHGSTTNKKIPERVMALEN--YIIGQVACGLNHTVIVSQDNLTVWACGDG 967

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G   + +SP K+       + +I+CG + +  L  D    +++ FG  +    
Sbjct: 968  DYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWD---GKLFMFGQDR--MC 1022

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
            G  + R      PQV   L    I+ IS   + + AL+++G +YTWG       G   T+
Sbjct: 1023 GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTN 1082

Query: 268  DVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             V  P +L  SLS     Q + G  H    + + +      + H +L  PE + S   L 
Sbjct: 1083 HVQEP-TLVESLSGKNIRQISAGRTHSAAWSCEHD-----DAGHTLLGTPESIPSQYDL- 1135

Query: 325  VALEKVSNLDG 335
              L  VS LD 
Sbjct: 1136 --LADVSVLDA 1144



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 163/387 (42%), Gaps = 62/387 (16%)

Query: 36   VWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
            V+ +GAG  GQL   G+G L     PQL    S      + CG      + +      G 
Sbjct: 752  VYLFGAGRHGQLAEVGSGVL----VPQLTK--SFHEARKVVCGQNCTFIINN-----NGV 800

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCG 151
            V S G GS G+LG G   D+     ++   G        S G + H+  ++++G +F+ G
Sbjct: 801  VLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWG 860

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            DG +G+LGHG+      P ++ +   + V Q+ACG +HS V+  D    +++ FG G  G
Sbjct: 861  DGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTID---GKLFTFGYGDYG 917

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGF 263
            +LG      + +  P+  + L +  I+G  A G     + ++ +L  W          G 
Sbjct: 918  RLGHGSTTNKKI--PERVMALENY-IIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGI 974

Query: 264  NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
              TS    P  +   S +   + + G      LT DG++ M G     M  + E  + T 
Sbjct: 975  GGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDR--MCGNCE--TRTS 1030

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
            P S   + V+ L    +I I+ GAEH+  +T K                           
Sbjct: 1031 P-SFNPQVVTALSSHHIIDISVGAEHTIALTSK--------------------------G 1063

Query: 382  AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + TWG    GQLGLG+T     P +V
Sbjct: 1064 IVYTWGSNTDGQLGLGHTNHVQEPTLV 1090



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 7/160 (4%)

Query: 31   QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
            Q  + VW+ G G  G+LG G    + SP  + + S   +  ++CG     ALT       
Sbjct: 956  QDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALT-----WD 1010

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GK+F +G+             +  P+ VT    H   I  IS G  H+  ++  G ++T 
Sbjct: 1011 GKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHH--IIDISVGAEHTIALTSKGIVYTW 1068

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
            G  T GQLG G       P  V S   KN+ QI+ G  HS
Sbjct: 1069 GSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHS 1108



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 136/349 (38%), Gaps = 99/349 (28%)

Query: 93   VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            V+ +G G  GQL   G G +V    P+    F   R  +     G N +  ++++G + +
Sbjct: 752  VYLFGAGRHGQLAEVGSGVLV----PQLTKSFHEARKVV----CGQNCTFIINNNGVVLS 803

Query: 150  CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR---HSLVLLKDCLGNQVYGFG 206
            CG+G++G+LG G+    +    +S+     V Q+A       H++ L ++    +V+ +G
Sbjct: 804  CGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTEN---GEVFSWG 860

Query: 207  SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
             G  G+LG  + DR R    P+    L   E+V                           
Sbjct: 861  DGDYGKLGHGNSDRQRR---PRQIEALRGQEVV--------------------------- 890

Query: 266  TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                             Q A G+ H  V+T DG++   G   +G L      +   P   
Sbjct: 891  -----------------QVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIP--- 930

Query: 326  ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              E+V  L+   + Q+A G  H+ +V+                          +N  +  
Sbjct: 931  --ERVMALENYIIGQVACGLNHTVIVS-------------------------QDNLTVWA 963

Query: 386  WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
             G G++G+LG+G T  +  P  +    E  +R    ++ CG+ FT A++
Sbjct: 964  CGDGDYGKLGIGGTSAKTSPTKI----EVLSRVGIKKISCGAQFTAALT 1008


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 26/328 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V S G G+ G+LG G  +++ + + +      ++  +S       H LALT+      G 
Sbjct: 336 VRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTE-----GC 390

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +FSWG G  G+LGHG  +    PK +      R  +  +SAG+ HS  V+  G LFT G+
Sbjct: 391 IFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVC-VSAGYRHSACVTQEGQLFTWGE 449

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +G+LG GD  S + PV V    +     + CG  H+LVL +D  G  V+ FG+G  G+
Sbjct: 450 GDYGRLGLGDNTSRNVPVLVKDIASAG--SVVCGSSHTLVLAQD--GLTVWSFGAGDNGK 505

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSD 268
           LG   D  R V  P+V   ++ +    + A    S AL+  G +++WG     G  S   
Sbjct: 506 LG-HGDTSR-VYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDA 563

Query: 269 VNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                +L   L+F++      G  H + LT + EV   G +  G         +  P+SV
Sbjct: 564 TFMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGH---TNSPISV 620

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
             + V  L+ V + QI+AG  HS   T 
Sbjct: 621 PTQ-VQQLNNVTIHQISAGTSHSIAYTA 647



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 16/232 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G       P L+    ++S   + CG +H L L       G  V+
Sbjct: 443 QLFTWGEGDYGRLGLGDNTSRNVPVLVK--DIASAGSVVCGSSHTLVLAQD----GLTVW 496

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G G +G+LGHG+      PK +   +G  +    + AG  +S  ++DSG +F+ G G 
Sbjct: 497 SFGAGDNGKLGHGDTSRVYRPKVIESINGMMF--YKLCAGSQYSLALNDSGQVFSWGCGA 554

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
               G  D  +   P  +       V  I  G  H + L  +   N+VY +G+   GQ G
Sbjct: 555 CLGCGSPD-ATFMKPTLIDELTFTRVVDITSGDGHCMALTHN---NEVYCWGNNAMGQCG 610

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA---EGHLYTWGRGF 263
           +       +S+P     L+++ I  ISA    S A +A   + H+ +W R +
Sbjct: 611 LGHTN-SPISVPTQVQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPY 661



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 140/344 (40%), Gaps = 52/344 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WG  SS QL        ++PK V  F   +     + AG   +  VS  GC+ +CG 
Sbjct: 286 VYAWGSNSSHQLAELGSDKIVFPKKVKSFGNSQM----LEAGQYCTFAVSGDGCVRSCGK 341

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKD-CLGNQVYGFGSG 208
           G++G+LG GD  + S+   +     + + +I+       H+L L  + C    ++ +G G
Sbjct: 342 GSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGC----IFSWGDG 397

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG           P++  G L    +V +SA    SA ++ EG L+TWG       
Sbjct: 398 DYGKLGHGSSLTHKS--PKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRL 455

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSST 320
           G    +  N P  +    S      G +H LVL  DG  V   G   +G L   +     
Sbjct: 456 GLGDNTSRNVPVLVKDIASAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVY 515

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHW---------------VRLFI 362
           RP     + + +++G+   ++ AG+++S  +      F W               ++  +
Sbjct: 516 RP-----KVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDATFMKPTL 570

Query: 363 ISYTPFFPPFFIN-------VIAENRAIMTWGWGEHGQLGLGNT 399
           I    F     I         +  N  +  WG    GQ GLG+T
Sbjct: 571 IDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHT 614



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 11/163 (6%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  + VWS+GAG +G+LG G       P+++   +      L  G  + LAL        
Sbjct: 490 QDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALND-----S 544

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-ITHISAGWNHSGFVSDSGCLFT 149
           G+VFSWG G+   LG G   DA + KP T  D   +T +  I++G  H   ++ +  ++ 
Sbjct: 545 GQVFSWGCGAC--LGCGS-PDATFMKP-TLIDELTFTRVVDITSGDGHCMALTHNNEVYC 600

Query: 150 CGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
            G+   GQ G G   S  S P +V    N  +HQI+ G  HS+
Sbjct: 601 WGNNAMGQCGLGHTNSPISVPTQVQQLNNVTIHQISAGTSHSI 643


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 54  DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
           D L+PQL+  L S + V + A   G H LAL +      G+V+SWG G  G+LGHG+ V 
Sbjct: 481 DALAPQLVQGLVSRNIVKIAAHSDGHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVP 535

Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
              PK ++ F G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + P
Sbjct: 536 LEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           + V+      V  +ACG   +  L     G QV+ +G G  G+LG  +        P++ 
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLV 652

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
             L D+++V +      S AL+ +G +Y+WG+G N      +   V  P+ L        
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
              A G  H L LT D EV   G +      D   + +T+P   AL     LD   ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFD--TLHATKPEPAAL---PGLDTKHIVGI 767

Query: 342 AAGAEHSAVVTGKFHW 357
           A G   S   +    W
Sbjct: 768 ACGPAQSFAWSSCSEW 783



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V+SWG G  G+LG G       P+L++      +   V  +ACG  +  A+T+      
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAE----- 570

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G++++WGRG+ G+LGHG   D   P  V    G +       +G   +  V+++G +++ 
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG +G+LG G      +P  V    + +V ++ CG + S+ L KD    QVY +G G  
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +LG   +    V  P++  GL   +++ ++A      AL+ +  +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G +G   Y +   P++ +   +  V QIAC  +  L+L +           SG+     
Sbjct: 429 WGLIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSR-----------SGRVYTQA 477

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
            S D +     PQ+  GL    IV I+A+ D     AL+A G +Y+WG       G   T
Sbjct: 478 YSSDAL----APQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533

Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +  P+ L S+    QA       A G  +   +T +GE+   G  ++G L        
Sbjct: 534 VPLEEPK-LISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P+ VA      L G+KVI +A G+  +  +                         + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 623

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           N  + +WG G++G+LG G +     PK+V   ++ Q+ D  ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLV---EKLQDLDV-VKVRCGSQFSVALTK 675



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 52/258 (20%)

Query: 168 SPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +P  V   V++N+ +IA      H L L       +VY +G G  G+LG   D +  +  
Sbjct: 484 APQLVQGLVSRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLG-HGDTV-PLEE 538

Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
           P++       +    +V I+     SAA++AEG LYTWGRG        S+ D   P  +
Sbjct: 539 PKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                L     A G      L +T +G+V   G   +G L          P  V  EK+ 
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQ 656

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           +LD   V+++  G++ S  +T                          ++  + +WG G++
Sbjct: 657 DLD---VVKVRCGSQFSVALT--------------------------KDGQVYSWGKGDN 687

Query: 392 GQLGLGNTCDQIHPKVVN 409
            +LG G      +PK++ 
Sbjct: 688 QRLGHGTEEHVRYPKLLE 705


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 158/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + QIACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  R  S PQ+   L  I    ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GFELKRQSS-PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                           +  +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAF-------------------------VPSSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G  L  + SPQL+        + +A GGAH   LT     + G +
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  + GQLG  G       P+ +      +  I  I+ G+ HS  +S    +F+ G   
Sbjct: 108 WGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQ--IVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G + +  SSP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 HGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRFV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SL+ + +  +ACG  H LAL+      G 
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E+     P+ +    G  +  T ++AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPF--TQVAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 551

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 163/386 (42%), Gaps = 57/386 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            + +WG  + GQ G G      +P  + L   ++V+ +A    H LALTS      G V 
Sbjct: 56  TILAWGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSV-----GTVL 110

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S GQLG G    +  P PV    G   T+T I+AG +HS  ++ +G +F  GD  
Sbjct: 111 AWGGNSFGQLGDGTTASSRTPVPVRLPVG--TTVTAIAAGTSHSLAITATGAVFAWGDNA 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G     S PV V   V   V  IA G+ HSL +           +GS   GQLG
Sbjct: 169 VGQLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVAST---GATLAWGSNAFGQLG 225

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
              +      +++PQ+        +  ++A    S AL++ G +Y WG       G  ST
Sbjct: 226 DGTTTGSSTPITVPQLP------TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGST 279

Query: 267 SDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           SD + P ++  P+  + +    G +H L LT  G  L  G +  G L +   V S+ P++
Sbjct: 280 SDSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVA 339

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V              ++  GA  +AV   + H V                  +      +
Sbjct: 340 V--------------RVPGGATLTAVAIHRDHAV-----------------AVTSTATAL 368

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNL 410
            W     GQLG G T D   P  V+L
Sbjct: 369 AWSRNNEGQLGNGTTTDSSEPVAVSL 394



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 20/273 (7%)

Query: 83  TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
           T  ++V    + +WG  S GQ G+G    +  P PV    G   T+T I+    HS  ++
Sbjct: 47  TPTAAVATDTILAWGDNSFGQFGNGTTASSRTPVPVRLPVG--TTVTAIAGSDTHSLALT 104

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
             G +   G  +FGQLG G   S  +PV V   V   V  IA G  HSL +        V
Sbjct: 105 SVGTVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITAT---GAV 161

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           + +G    GQLG       S+ +P ++ +G     +  I+     S A+++ G    WG 
Sbjct: 162 FAWGDNAVGQLGDGTTTDSSLPVPVRLPVG---TTVTAIAGGLGHSLAVASTGATLAWGS 218

Query: 262 ------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                 G  +T+  + P ++P   + +  A G  H L LT  G V   G +  G L D  
Sbjct: 219 NAFGQLGDGTTTGSSTPITVPQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGS 278

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
              S+ P++V +       G     + +GA+HS
Sbjct: 279 TSDSSTPIAVRVPA-----GTTATAVVSGADHS 306



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 128/319 (40%), Gaps = 72/319 (22%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG  + GQLG G      +P  + L   ++V+ +A G +H LA+T+      G VF
Sbjct: 108 TVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITA-----TGAVF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQLG G   D+  P PV    G   T+T I+ G  HS  V+ +G     G   
Sbjct: 163 AWGDNAVGQLGDGTTTDSSLPVPVRLPVG--TTVTAIAGGLGHSLAVASTGATLAWGSNA 220

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
           FGQLG G     S+P+ V       V  +A G  HSL L        VY +G+   GQL 
Sbjct: 221 FGQLGDGTTTGSSTPITVPQL--PTVTAVAAGDVHSLALTST---GTVYAWGANSFGQLG 275

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIV---------------------------------- 238
            G + D    +++ +V  G     +V                                  
Sbjct: 276 DGSTSDSSTPIAV-RVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGS 334

Query: 239 ---------------GISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQ--SL 275
                           ++ + D + A+++      W R      G  +T+D + P   SL
Sbjct: 335 STPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPVAVSL 394

Query: 276 PSSLSFSQAALGWNHVLVL 294
           P+  + +  A+G +H L L
Sbjct: 395 PAGTAITAVAVGDDHSLAL 413



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 7/161 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V++WGA + GQLG G   D  +P  + + + ++ + +  G  H     S +    G   
Sbjct: 262 TVYAWGANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADH-----SLALTAAGGAL 316

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG+G  V +  P  V    G   T+T ++   +H+  V+ +          
Sbjct: 317 AWGDNGQGQLGNGATVGSSTPVAVRVPGG--ATLTAVAIHRDHAVAVTSTATALAWSRNN 374

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            GQLG+G     S PV VS      +  +A G  HSL L+ 
Sbjct: 375 EGQLGNGTTTDSSEPVAVSLPAGTAITAVAVGDDHSLALVD 415


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 193/439 (43%), Gaps = 77/439 (17%)

Query: 28  EEEQQVVKVWSWG---------AGTDGQL-GTGRLHDELSPQLLNLSSLSSVSMLACGGA 77
           E+ +    V+ WG         +G+DG + G G   D L P+ L  + +  VS +ACG  
Sbjct: 213 EDSESFGDVYVWGEVMCDTTSRSGSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVK 272

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           H   +T  +     +VF+WG   SG+LGHG       P+ +         I  I+ G  H
Sbjct: 273 HAALITRQA-----EVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEI--IACGEFH 325

Query: 138 SGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLL 194
           +  V+ +G L+T GDGT   G LGHG   SH  P +VS  +    V  ++CG  H+ ++ 
Sbjct: 326 TCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALIT 385

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL---- 250
                 Q+Y FG G  G LG       ++S P+    L  +  + +S     SAA+    
Sbjct: 386 S---SGQLYTFGDGTFGALGHGNRE--TISYPKEVESLKGLRTISVSCGVWHSAAVVEVI 440

Query: 251 -----SAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGD 297
                ++ G L+TWG G          S    P  +PS    +F ++A G    + LT  
Sbjct: 441 MTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTS 500

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           G +  +G S +G L +P   +  R   +  +KV       V+++A G+ H AV+T     
Sbjct: 501 GHMFTVGSSVYGQLGNPN--NDGRYPRLVEDKVGG---GGVVEVACGSYHVAVLTNTGE- 554

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                                    + TWG G +G+LG G+  D+   KV  L +  ++R
Sbjct: 555 -------------------------VYTWGKGANGRLGHGDIADR---KVPTLVEALRDR 586

Query: 418 DTQLEVFCGSGFTYAISRH 436
             +  + CGS FT AIS+H
Sbjct: 587 SVK-RIACGSSFTAAISQH 604



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 158/343 (46%), Gaps = 34/343 (9%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG    G+LG G       P+LL   S+ +V ++ACG  H  A+T+      G +
Sbjct: 281 AEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTAT-----GDL 335

Query: 94  FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+  +G LGHG  V    PK V+   +G    ++ +S G  H+  ++ SG L+T 
Sbjct: 336 YTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEG--LQVSTVSCGTWHTALITSSGQLYTF 393

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK------DCLGNQVYG 204
           GDGTFG LGHG+  + S P +V S        ++CG+ HS  +++      +    +++ 
Sbjct: 394 GDGTFGALGHGNRETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFT 453

Query: 205 FGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYT----- 258
           +G G + +LG      RS  L P     L D      +     +  L+  GH++T     
Sbjct: 454 WGDGDKYRLGHGD---RSAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSV 510

Query: 259 WGRGFNSTSDVNCPQSLPSS---LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           +G+  N  +D   P+ +          + A G  HV VLT  GEV   G   +G L   +
Sbjct: 511 YGQLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGD 570

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
                 P  V       L    V +IA G+  +A ++ +  WV
Sbjct: 571 IADRKVPTLVEA-----LRDRSVKRIACGSSFTAAIS-QHKWV 607


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 33/323 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++WG   +GQLG G + +   L    ++L++  ++ +++CG  H + L        G++
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQD-----GQI 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA-GWNHSGFVSDSGCLFTCGD 152
           +S G    GQ G  +  +  + + +  F+  R  IT++S+ G NH+  ++D  C++  GD
Sbjct: 56  YSCGSNDYGQTGR-QRNNKRFAR-IDAFESMR--ITNVSSNGANHNLAINDKNCIYAWGD 111

Query: 153 GTFGQLGHGDY---RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            + GQLG  D    + + +P ++ S     V Q+ACG  HSL ++ D     V+ +GS +
Sbjct: 112 NSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVIND---GTVFSWGSNR 168

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG+  + + SV  P+  + L    IV I+A G  S A++  G L TWG+      G 
Sbjct: 169 YGQLGIDSN-VSSVE-PKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGL 226

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            +   V  P  + S  S   + AA G +H  VLT +G V   G    G L          
Sbjct: 227 GTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCS 286

Query: 322 PLSVALEKVSNLDGVKVIQIAAG 344
           P     + V +L G+ V QI  G
Sbjct: 287 P-----QMVVDLMGIVVTQITCG 304



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 52/276 (18%)

Query: 147 LFTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           +F  G    GQLG G  D         V    N  +  I+CG+ H+++LL+D    Q+Y 
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQD---GQIYS 57

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG-DRSAALSAEGHLYTWGRGF 263
            GS   GQ G  ++  R   +         + I  +S+NG + + A++ +  +Y WG   
Sbjct: 58  CGSNDYGQTGRQRNNKRFARID----AFESMRITNVSSNGANHNLAINDKNCIYAWGDNS 113

Query: 264 NS---TSDVN------CPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
           +     +D N       P+ + S   F+  Q A G +H L +  DG V   G + +G L 
Sbjct: 114 DGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLG 173

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
               VSS  P     +++  L G  ++QIAAG  HS  +T                    
Sbjct: 174 IDSNVSSVEP-----KQILKLSGFYIVQIAAGGAHSLAITN------------------- 209

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                  + A++TWG    GQLGLG     + P  V
Sbjct: 210 -------SGALLTWGKNSFGQLGLGTNDGVLSPTCV 238



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 9/157 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V+SWG+   GQLG       + P Q+L LS    V  +A GGAH LA+T+      G + 
Sbjct: 161 VFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQ-IAAGGAHSLAITN-----SGALL 214

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+ S GQLG G     L P  V+        I + + G +H+  ++  G +FT G G+
Sbjct: 215 TWGKNSFGQLGLGTNDGVLSPTCVSSLRSQH--IAYAACGEDHTAVLTKEGGVFTFGAGS 272

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLGH     H SP  V   +   V QI CG  ++L
Sbjct: 273 SGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRFYAL 309



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 40/282 (14%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F+WG+   GQLG G + +    K         +TI  IS G NH+  +   G +++CG 
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC-GMRHSLVL-LKDCLGNQVYGFGSGKR 210
             +GQ G    R++    ++ +F +  +  ++  G  H+L +  K+C    +Y +G    
Sbjct: 61  NDYGQTGRQ--RNNKRFARIDAFESMRITNVSSNGANHNLAINDKNC----IYAWGDNSD 114

Query: 211 GQLGVSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           GQLGV+   ++     P+    L    +V ++     S A+  +G +++WG       G 
Sbjct: 115 GQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGI 174

Query: 264 NS-TSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLG---------GSHHGMLS 312
           +S  S V   Q L  S     Q A G  H L +T  G +L  G         G++ G+LS
Sbjct: 175 DSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLS 234

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            P  VSS R   +A               A G +H+AV+T +
Sbjct: 235 -PTCVSSLRSQHIAYA-------------ACGEDHTAVLTKE 262


>gi|432095555|gb|ELK26701.1| Secretion-regulating guanine nucleotide exchange factor, partial
           [Myotis davidii]
          Length = 442

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 175/425 (41%), Gaps = 46/425 (10%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           GA + GQLG G   D   PQ LN       V  +A GG H   +T      GG +F  G 
Sbjct: 1   GANSYGQLGLGHKEDVFLPQQLNDFCKPECVRRIAGGGGHSAVVTD-----GGSLFVCGL 55

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG G M D LY  P     G    I  ++ GW+ +  ++++G + +CG  +FGQL
Sbjct: 56  NKDGQLGLGHMEDVLYFTPCKSLIG--CPIQQVACGWDFTIILTENGQVLSCGSNSFGQL 113

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRGQLGV 215
           G           +    + + V  IA G+RH+L      +  Q +G G   SG+R     
Sbjct: 114 GVPHGPGKCVVPQAIELLKEEVVSIAAGLRHALAATASGIVFQ-WGTGLASSGRRLCPEQ 172

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDVN 270
           +     +   P    GL + + + + A  D SA+L+  G LY WG        +  + + 
Sbjct: 173 TLPLFLTAKEPGRVPGLENSKAICVVAGSDHSASLADSGELYVWGSNKHGQLASQAAFLP 232

Query: 271 CPQSLPSSLSFSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLS---------DPER 316
            PQ +  +  F +  +     GW H++  TG G+V   G + +G L           PE+
Sbjct: 233 VPQKI-EAHCFQKEKVTAVWSGWTHLVAQTGTGKVFTWGRADYGQLGRKLESEEGWRPEK 291

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
             S  P S   E   +      +    GA     V+  F  +  F ++ +    P     
Sbjct: 292 QGSPLPCSRPWESTPS-----SLHCLTGATE---VSSAF-LLPPFPLTVSWCHSPGLGTR 342

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR- 435
                A  +WGW EHG  G G+  D   PK V    +       L V CG+G + A+ + 
Sbjct: 343 PTPGGACYSWGWNEHGMCGDGSEADVQAPKPV----QALQSSPGLLVGCGAGHSLALCQL 398

Query: 436 HCLPS 440
             LPS
Sbjct: 399 PALPS 403


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 50/327 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +  WG  S GQ G G  +  + P+P  +   H   +  ++ G NHS F+ + G ++TCG 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            T GQLGH      S P  + +   +++  +ACG  HS+ L       QV+ +G+G  GQ
Sbjct: 61  NTKGQLGHES--EGSKPELIGALAGQHIVHVACGESHSVALSDQ---GQVFSWGAGSDGQ 115

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG++     +V++P++   L+   I+ IS       AL+A+G  +TWG+  NS   +   
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172

Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           +  PS  S            +Q A G  H   L+  G V   G +  G L   +      
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P  V L     L   KV+ I+ G EH+AV+T                          ++ 
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLT--------------------------KSG 261

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + T+G G  GQLG  +  D+++P+ V
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRV 288



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ SSGQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG  H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG     +   P+L+   +   +  +ACG +H +AL+       G+VF
Sbjct: 54  EVYTCGLNTKGQLGHES--EGSKPELIGALAGQHIVHVACGESHSVALSD-----QGQVF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG   + DA+   P      ++ TI  IS G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLTTIEDAV-TVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G +  S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 YGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---SLSGAVFGWGKNSSGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +R R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDERDRES--PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    SQ A G +H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG  + GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    ++ I+ G +H+  FV  SG ++  G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  113 bits (282), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 105/394 (26%), Positives = 169/394 (42%), Gaps = 66/394 (16%)

Query: 36   VWSWGAGTDGQLGT------GRLHDELS---PQLLNLSSLSSVSMLACGGAHVLALTSPS 86
            ++SWG  T+GQ+G         L  ++    P+L+     + V+ +ACG  H +A+T   
Sbjct: 1502 MFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAIT--- 1558

Query: 87   SVIGGKVFSWGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                G V +WG  S  QLG GE   +   +P P+         I  +S G  H+  +   
Sbjct: 1559 --YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALT----NIQSVSCGSEHTLALDYI 1612

Query: 145  GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G +F+ G+G  G LGHG+     SP  + +    NV  I CG  HSLVL K+    QVY 
Sbjct: 1613 GQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKN---RQVYS 1669

Query: 205  FGSGKRGQLGVSKDRIRS----VSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTW 259
            +G  + GQLG+ K    +    ++ P+   G L  + ++ I+A    S AL+  G +Y W
Sbjct: 1670 WGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGW 1729

Query: 260  GRGFN---------STSDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHG 309
            G   N          T  V  PQ +P      +    G N    L  + E + +  + + 
Sbjct: 1730 GYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLGLEKEPIKITSTTNN 1789

Query: 310  MLSDPERVSSTRPLSVAL--EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
            +L   +     R ++     +K+     + V+ ++ G  HS  +                
Sbjct: 1790 ILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLAL---------------- 1833

Query: 368  FFPPFFINVIAENRAIMTWGWG--EHGQLGLGNT 399
                    V+A+ +  M + WG  +HGQLG+G T
Sbjct: 1834 --------VVADTKHYMLFAWGMHKHGQLGIGET 1859



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 78/320 (24%), Positives = 125/320 (39%), Gaps = 84/320 (26%)

Query: 91   GKVFSWGRGSSGQLGH---------GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
            G +FSWG+ + GQ+G+          + +   +PK +         +T ++ G+ HS  +
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKD--TIVTSVACGYQHSVAI 1557

Query: 142  SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
            + +G +   GD +  QLG G+    S P         N+  ++CG  H+L L  D +G Q
Sbjct: 1558 TYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLAL--DYIG-Q 1614

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            V+ +G+G+ G LG   + +     P++   L  + +  I   G  S  L+    +Y+WGR
Sbjct: 1615 VFSWGNGEGGLLGHGNEDV--CPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGR 1672

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
                                    LG +  L             +    L+ P+RV    
Sbjct: 1673 N-------------------EGGQLGIDKKLFT-----------NEKCYLTTPKRVK--- 1699

Query: 322  PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
                      NL+GV VIQIAAG  HS                            +A N 
Sbjct: 1700 ---------GNLEGVGVIQIAAGEAHSL--------------------------ALALNG 1724

Query: 382  AIMTWGWGEHGQLGLGNTCD 401
             +  WG+  +GQ+GLG   D
Sbjct: 1725 QVYGWGYNMNGQIGLGMQTD 1744



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 79/291 (27%), Positives = 120/291 (41%), Gaps = 39/291 (13%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G LG G      SP+++      +V  + CGG H L LT        +V+
Sbjct: 1614 QVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTK-----NRQVY 1668

Query: 95   SWGRGSSGQLG------HGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCL 147
            SWGR   GQLG        E      PK V    +G    +  I+AG  HS  ++ +G +
Sbjct: 1669 SWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEG--VGVIQIAAGEAHSLALALNGQV 1726

Query: 148  FTCGDGTFGQLGHGDYRSHSSPVKVSSFV---NKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            +  G    GQ+G G  ++ + PV     +   NK      CG+  S  L    L  +   
Sbjct: 1727 YGWGYNMNGQIGLG-MQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQL---GLEKEPIK 1782

Query: 205  FGSGKRGQLGVSK--DRIRSVS---LPQVTIGLHDIEIVGISANGDRSAAL----SAEGH 255
              S     L   K  D+ R+V+   +P+     H I ++ +S   + S AL    +    
Sbjct: 1783 ITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYM 1842

Query: 256  LYTWG---RGFNSTSDVNCPQSLPSSLSFSQ------AALGWNHVLVLTGD 297
            L+ WG    G     +     S+P  +++ Q       A G  H LV+  D
Sbjct: 1843 LFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACGSYHSLVVAND 1893


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 154/353 (43%), Gaps = 53/353 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV--SDSGCLFTC 150
           V++WG G +G LGHGE +D   P+ V       Y I  ++ G  H+ F   ++ G +++ 
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLA--YNIKRLACGL-HTVFALNAEDGKVYSW 57

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G +G LG G+ RS  +P+K++SF + NV  I+C   H+  +        VY FG    
Sbjct: 58  GLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-------- 262
            QLGV        + PQ+   L+D  I+ ++     SAALSA+G+L+ WG G        
Sbjct: 118 SQLGVGD--TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLG 175

Query: 263 -FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            +N +++                A G  H  +LT  G V   G + +G ++ P       
Sbjct: 176 NYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHL 235

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P  ++          + + ++ G+ HSA +T                          EN 
Sbjct: 236 PYRISFNTSK-----RFVSVSCGSFHSAAIT--------------------------ENG 264

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGFTYAI 433
            +  WG    G+LGLG+   +  P  V   + F  RD ++  + CGS  T A+
Sbjct: 265 KLYAWGLETDGRLGLGDCKQRSSPTEV---EGF--RDKKIGRIACGSKHTAAL 312



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 30/329 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG+G +G LG G   D  SP+++      ++  LACG   V AL +      GKV+S
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAED----GKVYS 56

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF---VSDSGCLFTCGD 152
           WG G  G LG G +     P  +  F      +  IS    H+     V+++G +++ GD
Sbjct: 57  WGLGKYGILGQGNLRSRFAPLKIASFKSS--NVIDISCHELHAAAVTSVTNTGSVYSFGD 114

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            +  QLG GD   ++ P  V+   ++N+ ++ACG  HS  L     GN ++ +G G  GQ
Sbjct: 115 NSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAAL--SAKGN-LFLWGLGDDGQ 171

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG+    + S     + IG    +++ ++     +  L+  G +Y +G   N    +  P
Sbjct: 172 LGLGNYNL-STEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGS--NIYGQIAAP 228

Query: 273 QS----LPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                 LP  +SF+ +      + G  H   +T +G++   G    G L   +    + P
Sbjct: 229 SMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSP 288

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
                 +V      K+ +IA G++H+A +
Sbjct: 289 -----TEVEGFRDKKIGRIACGSKHTAAL 312



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 106/227 (46%), Gaps = 10/227 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV+SWG G  G LG G L    +P  +     S+V  ++C   H  A+TS ++   G V+
Sbjct: 53  KVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNT--GSVY 110

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G  S+ QLG G+      P+ VT  +     I  ++ G  HS  +S  G LF  G G 
Sbjct: 111 SFGDNSNSQLGVGDTEPYAEPQLVTVLNDE--NIIKVACGKYHSAALSAKGNLFLWGLGD 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G+Y   + P  +     K  V  +ACG  H+ +L    +G  VY FGS   GQ 
Sbjct: 169 DGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCIL---TVGGLVYAFGSNIYGQ- 224

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            ++   +    LP           V +S     SAA++  G LY WG
Sbjct: 225 -IAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWG 270



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 24/192 (12%)

Query: 20  AKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQLLNL 63
           A+P++     ++ ++KV                + WG G DGQLG G  +    P +L++
Sbjct: 129 AEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHI 188

Query: 64  SSLSSVSM-LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
               +  M +ACG  H   LT     +GG V+++G    GQ+    M     P  ++F  
Sbjct: 189 GEKKAKVMDVACGDLHTCILT-----VGGLVYAFGSNIYGQIAAPSMNKFHLPYRISFNT 243

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
             R+    +S G  HS  ++++G L+  G  T G+LG GD +  SSP +V  F +K + +
Sbjct: 244 SKRFV--SVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGR 301

Query: 183 IACGMRHSLVLL 194
           IACG +H+  L+
Sbjct: 302 IACGSKHTAALI 313


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 165/418 (39%), Gaps = 107/418 (25%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSM------LACGGAHVLALTSPSS 87
           VW+WG  TDGQLG    +D     P+   L + SSVSM      +ACG AH L L     
Sbjct: 85  VWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFL----- 139

Query: 88  VIGGKVFSWGRGSSGQLGHG------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
            + G+V+S G    GQLGH       E VDAL P          YTIT I+ G  HS  +
Sbjct: 140 -VDGQVYSCGSNDQGQLGHKKHRSKPERVDALEP----------YTITQIACGETHSLAL 188

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS------------------------FVN 177
           + +G +F  GD    QLG     S   P   SS                        F+ 
Sbjct: 189 TSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMT 248

Query: 178 K----------NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227
           +           + QI CG   SLVL +      V+ +G    GQL + +  +++V +P 
Sbjct: 249 RPRLVRALTGHKIVQIVCGANFSLVLSER---GDVFAWGDNTSGQLCLRE--LKTVPVPT 303

Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV--NCPQSLPSSLSF---- 281
           +   L+ I I  ++A G  + AL+  G +Y+WG        V    P ++PS L      
Sbjct: 304 LVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQ 363

Query: 282 --SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
             +  A G +H +VLT  G V   G    G L      +   P       +  L G    
Sbjct: 364 FCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINP-----RMIFELMGKSAS 418

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG 397
           Q+  G  H+ V                 FFP        +   I  +G G +GQLG G
Sbjct: 419 QVLCGRRHTIV-----------------FFP--------KTNKIYAFGLGGNGQLGTG 451



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 151/369 (40%), Gaps = 89/369 (24%)

Query: 89  IGGKVFSWGRGSSGQLGHGEMVD--ALYPKPV---TFFDGHRYTI-THISAGWNHSGFVS 142
           + G V++WG  + GQLG     D     P+P     F      T+ + I+ G  H+ F+ 
Sbjct: 81  LAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLV 140

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           D G +++CG    GQLGH  +RS   P +V +     + QIACG  HSL L  +    QV
Sbjct: 141 D-GQVYSCGSNDQGQLGHKKHRS--KPERVDALEPYTITQIACGETHSLALTSN---GQV 194

Query: 203 YGFGSGKRGQLGVSK------------------------DRIRSVSL--------PQVTI 230
           + +G  K  QLG++                         D + + +L        P++  
Sbjct: 195 FAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVR 254

Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS-----------SL 279
            L   +IV I    + S  LS  G ++ WG   ++TS   C + L +            +
Sbjct: 255 ALTGHKIVQIVCGANFSLVLSERGDVFAWG---DNTSGQLCLRELKTVPVPTLVKELYGI 311

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
              Q A G  H L LT +G+V   G +  G L     V  T P ++   ++  L+     
Sbjct: 312 PIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLG----VGDTAPHTIP-SRLKTLEHQFCA 366

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
            IA G +HS V+T                          E   + ++G G  GQLG G  
Sbjct: 367 HIACGEDHSVVLT--------------------------ETGGVYSFGAGGQGQLGHGTL 400

Query: 400 CDQIHPKVV 408
            ++I+P+++
Sbjct: 401 QNEINPRMI 409



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 155/374 (41%), Gaps = 73/374 (19%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G+   GQLG  +   +  P+ ++     +++ +ACG  H LALTS      G+VF
Sbjct: 143 QVYSCGSNDQGQLGHKKHRSK--PERVDALEPYTITQIACGETHSLALTS-----NGQVF 195

Query: 95  SWGRGSSGQLGHG----------------------EMVDAL------------YPKPVTF 120
           +WG   + QLG                        + VD L             P+ V  
Sbjct: 196 AWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRA 255

Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
             GH+  I  I  G N S  +S+ G +F  GD T GQL   + ++   P  V       +
Sbjct: 256 LTGHK--IVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPI 313

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
            Q+A G RH+L L       QVY +G+ + GQLGV      ++  P     L       I
Sbjct: 314 RQLAAGGRHTLAL---TFNGQVYSWGNNQFGQLGVGDTAPHTI--PSRLKTLEHQFCAHI 368

Query: 241 SANGDRSAALSAEGHLYTWGRGFNS-------TSDVNCPQSLPSSL--SFSQAALGWNHV 291
           +   D S  L+  G +Y++G G           +++N P+ +   +  S SQ   G  H 
Sbjct: 369 ACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEIN-PRMIFELMGKSASQVLCGRRHT 427

Query: 292 LVL---TGDGEVLMLGGSHH---GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
           +V    T       LGG+     G+  +P++   T  L      V  LD   +++IA GA
Sbjct: 428 IVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPML------VRVLDATPILRIATGA 481

Query: 346 EHS---AVVTGKFH 356
             S   AVV  + H
Sbjct: 482 SASHCFAVVGNRNH 495


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 165/406 (40%), Gaps = 62/406 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            W WGA T GQLG G      +PQ   +S L+ V  +     H L L S      G V++
Sbjct: 269 TWVWGANTYGQLGDGTTTSRSAPQ--QVSGLAGVDGVLGAELHSLVLKSD-----GTVWT 321

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGDGT 154
           WG    GQLG G     L P  V    G    +  ++AG   HS  V  +G ++T G   
Sbjct: 322 WGSNQRGQLGDGTQEQRLVPVQVMGLSG----VVAVAAGSGQHSVAVMANGEVWTWGHNV 377

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G     + P +  + V +    +A G  H L    D     V+ +G   +GQLG
Sbjct: 378 EGQLGEGSSSYSAVPKRSHALVERT--SVAAGRYHGLASKPD---GTVWAWGDNAKGQLG 432

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
              +  R+    +P +T       +V ++A    S AL A+G ++ WG   N      ST
Sbjct: 433 DGTTAQRLLPTQVPGLT------NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGST 486

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +D + P  +P        A G  H L +  DG +   G ++ G L D   V   RP+   
Sbjct: 487 TDRSNPTQVPGLTGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVD--RPIPTQ 544

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLF---------IISYTPFFPPFFI 374
           +  V+      V+ +AAG  HS VV      + W   +          I   P   P   
Sbjct: 545 VPGVTG-----VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLT 599

Query: 375 NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            V+A             +  +  WG+  HGQLG GNT  Q  P  V
Sbjct: 600 GVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQV 645



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 166/383 (43%), Gaps = 66/383 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG+   G+LG G     L P  + +  L ++  +A G AH LAL        G+V++
Sbjct: 169 VWAWGSNGAGRLGDGTTTQRLMP--VQVQGLPTIKAIAAGNAHSLALDGT-----GRVWA 221

Query: 96  WGRGSSGQLGHG----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           WG  S+GQLG       M+ AL P             T +SAG NHS      G  +  G
Sbjct: 222 WGSNSNGQLGDTTAGYRMLPALVPGLTN--------ATGLSAGSNHSLVRQADGTTWVWG 273

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T+GQLG G   S S+P +VS      V  +     HSLVL  D     V+ +GS +RG
Sbjct: 274 ANTYGQLGDGTTTSRSAPQQVSGLA--GVDGVLGAELHSLVLKSD---GTVWTWGSNQRG 328

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG      R V  P   +GL  +  V  + +G  S A+ A G ++TWG       G  S
Sbjct: 329 QLGDGTQEQRLV--PVQVMGLSGVVAV-AAGSGQHSVAVMANGEVWTWGHNVEGQLGEGS 385

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           +S    P+   + +  +  A G  H L    DG V   G +  G L D    ++ R L  
Sbjct: 386 SSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGD--GTTAQRLLPT 443

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
            +  ++N+     + +AAG  HS++                          +  +  +  
Sbjct: 444 QVPGLTNM-----VAVAAG-HHSSL-------------------------ALKADGTVWA 472

Query: 386 WGWGEHGQLGLGNTCDQIHPKVV 408
           WG   +GQLG G+T D+ +P  V
Sbjct: 473 WGDNANGQLGNGSTTDRSNPTQV 495



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 167/403 (41%), Gaps = 56/403 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G L D+  P  +    L ++S +  G  H LA+ S      G V++
Sbjct: 69  VWAWGDNAYGQLGNGSLQDQRVP--VRAWGLWNISAVGAGDLHSLAMKSD-----GTVWT 121

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G       P  V         +  ++AG++HS  +   G ++  G    
Sbjct: 122 WGGNNFGQLGDGTTTGRQAPVQVPGLG----EVVRVAAGFSHSLALKTDGTVWAWGSNGA 177

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G       PV+V       +  IA G  HSL L  D  G +V+ +GS   GQLG 
Sbjct: 178 GRLGDGTTTQRLMPVQVQGL--PTIKAIAAGNAHSLAL--DGTG-RVWAWGSNSNGQLGD 232

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
           +    R   LP +  GL      G+SA  + S    A+G  + WG       G  +T+  
Sbjct: 233 TTAGYR--MLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSR 288

Query: 270 NCPQSLPSSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           + PQ + S L+     LG   H LVL  DG V   G +  G L D  +     P+     
Sbjct: 289 SAPQQV-SGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPV----- 342

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWV-------RLFIISYTPFFPPFFINVIAENR 381
           +V  L GV  +   +G    AV+     W        +L   S +    P   + + E  
Sbjct: 343 QVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVPKRSHALVERT 402

Query: 382 AIMT--------------WGWGEH--GQLGLGNTCDQIHPKVV 408
           ++                W WG++  GQLG G T  ++ P  V
Sbjct: 403 SVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQV 445



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 161/395 (40%), Gaps = 62/395 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW+WG+   GQLG G     L P Q++ LS +  V++ A  G H +A+     +  G+V+
Sbjct: 319 VWTWGSNQRGQLGDGTQEQRLVPVQVMGLSGV--VAVAAGSGQHSVAV-----MANGEVW 371

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G    +  PK            T ++AG  H       G ++  GD  
Sbjct: 372 TWGHNVEGQLGEGSSSYSAVPKRSHAL----VERTSVAAGRYHGLASKPDGTVWAWGDNA 427

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G       P +V    N  +  +A G   SL L  D     V+ +G    GQLG
Sbjct: 428 KGQLGDGTTAQRLLPTQVPGLTN--MVAVAAGHHSSLALKAD---GTVWAWGDNANGQLG 482

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
              + DR     +P +T       +V I+A    + A+ A+G L+TWG       G  +T
Sbjct: 483 NGSTTDRSNPTQVPGLT------GVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTT 536

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            D   P  +P        A G  H LV+  DG V   G ++ G L      ++ RP+   
Sbjct: 537 VDRPIPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGG--GTTTIRPVP-- 592

Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHWVRLF-----------IISYTPFFPPFFI 374
             +  NL GV  + I AG  HS A+ T    W   +                P   P F 
Sbjct: 593 -SQTPNLTGV--VAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFS 649

Query: 375 N------------VIAENRAIMTWGWGEHGQLGLG 397
                         I  + ++ TWG+   GQLG G
Sbjct: 650 GGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDG 684



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 127/299 (42%), Gaps = 30/299 (10%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG  T GQLG G      SP    +S L+ V  LA G  HV+ +      + G V++
Sbjct: 769  VWAWGDNTYGQLGDGTTLATRSPA--QVSGLTDVEGLAAGEGHVVVVK-----MDGTVWT 821

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  + GQLG G     L P  V    G    +  ++AG+ HS  +   G ++  G+  +
Sbjct: 822  WGNNAKGQLGDGTTTRRLVPTQVPGLTG----VVAVAAGYAHSLALKADGTVWGWGENIY 877

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G      +P +        V  +A G  H L    D     ++ +G    GQLG+
Sbjct: 878  GQLGDGTTTQRVAPTQAQGLT--VVLSMASGTYHGLARKAD---GTLWAWGYNAHGQLGI 932

Query: 216  --SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
              +  R+    +P ++       +V +SA    S AL  +G ++ WG   N      +T+
Sbjct: 933  GTTTTRLAPTLVPSLS------GVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTT 986

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              + P   PS  S    + G+ + L +  DG V   G +  G L          P  VA
Sbjct: 987  TRHVPTQAPSLSSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQVA 1045



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 155/379 (40%), Gaps = 66/379 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG+  +GQLG G     + P      +L+ V  +  G  H LAL +      G V++
Sbjct: 570 VWAWGSNYEGQLGGGTT--TIRPVPSQTPNLTGVVAITAGLYHSLALKTD-----GTVWA 622

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG+G       P  V  F G       + AG  HS  +   G ++T G    
Sbjct: 623 WGYNLHGQLGNGNTTTQQVPTQVPGFSGG----VSLGAGIYHSLAIKTDGSVWTWGYNYR 678

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S ++P +V+ F    V  +A G  HS+ L  D      + +GS  +GQLG 
Sbjct: 679 GQLGDGTTTSRTTPTQVAGFT--GVSFLAAGEFHSVALRTD---GTAWAWGSNDKGQLGD 733

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR------GFNSTSD 268
              R          +G   +      A GDR +AA  ++G ++ WG       G  +T  
Sbjct: 734 GSARWHYAPTLSRLVGARGL------AAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLA 787

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +         A G  HV+V+  DG V   G +  G L D    ++TR L     
Sbjct: 788 TRSPAQVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDG---TTTRRL--VPT 842

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L G  V+ +AAG  HS                            +A       WGW
Sbjct: 843 QVPGLTG--VVAVAAGYAHS----------------------------LALKADGTVWGW 872

Query: 389 GE--HGQLGLGNTCDQIHP 405
           GE  +GQLG G T  ++ P
Sbjct: 873 GENIYGQLGDGTTTQRVAP 891



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 144/347 (41%), Gaps = 57/347 (16%)

Query: 65  SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
           + S + ++A G  H LA+ S      G V++WG  + GQLG+G + D   P         
Sbjct: 46  TASRLGLVAAGRHHTLAVRSD-----GTVWAWGDNAYGQLGNGSLQDQRVPVRAWGL--- 97

Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
            + I+ + AG  HS  +   G ++T G   FGQLG G      +PV+V       V ++A
Sbjct: 98  -WNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGL--GEVVRVA 154

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
            G  HSL L  D     V+ +GS   G+LG      R   +P    GL  I+   I+A  
Sbjct: 155 AGFSHSLALKTD---GTVWAWGSNGAGRLGDGTTTQR--LMPVQVQGLPTIKA--IAAGN 207

Query: 245 DRSAALSAEGHLYTWGRGFNST-SDVNC-----PQSLPSSLSFSQAALGWNHVLVLTGDG 298
             S AL   G ++ WG   N    D        P  +P   + +  + G NH LV   DG
Sbjct: 208 AHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADG 267

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
              + G + +G L D    S + P     ++VS L GV  +    GAE  ++        
Sbjct: 268 TTWVWGANTYGQLGDGTTTSRSAP-----QQVSGLAGVDGV---LGAELHSL-------- 311

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                            V+  +  + TWG  + GQLG G    ++ P
Sbjct: 312 -----------------VLKSDGTVWTWGSNQRGQLGDGTQEQRLVP 341



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 16/186 (8%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +W+WG    GQLG G     L+P L  + SLS V  L+    H LAL        G V++
Sbjct: 919  LWAWGYNAHGQLGIGTTTTRLAPTL--VPSLSGVVSLSATHQHSLALKPD-----GTVWA 971

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  S+GQLG G       P           ++  +SAG+ +S  V   G +++ G    
Sbjct: 972  WGYNSNGQLGDGTTTTRHVPTQAPSLS----SVKAVSAGFEYSLAVKADGTVWSWGINDR 1027

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G     ++P +V+     +V  +     H+LV+  D     + GFG  + GQLG 
Sbjct: 1028 GQLGSGTATPRATPTQVAGL--NSVTLLLAARAHALVVSAD---GTMRGFGDNEAGQLGA 1082

Query: 216  SKDRIR 221
                IR
Sbjct: 1083 GDTLIR 1088


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 91  ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 145

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G      YP  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 146 YSWGKNEFGQLGLGHTESKDYPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 203

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 204 KHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 261

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G    R + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 262 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 319

Query: 274 SLPS 277
           ++P+
Sbjct: 320 TIPT 323



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 30/258 (11%)

Query: 69  VSMLACGGA-----HVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFD 122
           +++L  GGA      +LA +  +    G++F+WG+   GQLG G +      P+ V    
Sbjct: 63  LAVLERGGAGVQVHQLLAGSGGARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 122

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           G    +  ISAG  HS  +S SG +++ G   FGQLG G   S   P  +    N+ V  
Sbjct: 123 G--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEF 180

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
           +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R    P +   L +  +  I
Sbjct: 181 VACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELR----PCLVAELVEYRVTQI 233

Query: 241 SANGDRSAALSAE-GHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLV 293
           +     + A  ++ G ++++G G +       T D   P  LP  +S S+     +H   
Sbjct: 234 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVSSSEELKLESH--- 288

Query: 294 LTGDGEVLMLGGSHHGML 311
            T + E++M+ G +  +L
Sbjct: 289 -TSEKELIMIAGGNQSIL 305



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 41/219 (18%)

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +++ +G    GQLGV + +  S + PQ+   L  + +  ISA    S ALS  G++Y+WG
Sbjct: 91  ELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWG 149

Query: 261 R------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGML 311
           +      G   T   + P SL   L   +    A G +H  +LT DG +   G   HG L
Sbjct: 150 KNEFGQLGLGHTESKDYP-SLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQL 208

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                 +  RP  VA      L   +V QIA G  H+                       
Sbjct: 209 GHNSTQNELRPCLVA-----ELVEYRVTQIACGRWHT----------------------- 240

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
             +  +++   + ++G G+ GQLG G T DQ+ P  V +
Sbjct: 241 --LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 277


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 159/381 (41%), Gaps = 54/381 (14%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           W  G  G + +        PQ     S  S+  +ACGG H + L        G+V++ G 
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLE-----DGEVYTCGL 61

Query: 99  GSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ GQ
Sbjct: 62  NTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDQGQLFSWGAGSDGQ 116

Query: 158 LGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           LGH     S + P  +     + + Q++CG  H + L  D    Q + +G  + GQLG+ 
Sbjct: 117 LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAAD---GQFFTWGQNRHGQLGLG 173

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
           K+   S + PQ    L  I +  ++A G  S ALS  G ++ WGR      G +  +D  
Sbjct: 174 KE-FPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ 232

Query: 271 --CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
             C   L  +      + G  H  VLT  G V   G    G L          P      
Sbjct: 233 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNP-----R 287

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L G +V QIA G +H+              +++ P            +  I  +G 
Sbjct: 288 RVLELMGSEVTQIACGRQHT--------------LAFVP-----------SSGLIYAFGC 322

Query: 389 GEHGQLGLGNTCDQIHPKVVN 409
           G  GQLG G+TC+   P  V 
Sbjct: 323 GARGQLGTGHTCNVKCPSPVK 343



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG    GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 158 QFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS-----LSGAV 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 213 FGWGRNNAGQLGLSDETDRQSPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +FGQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 271 SFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 328

Query: 214 G 214
           G
Sbjct: 329 G 329



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 143/324 (44%), Gaps = 56/324 (17%)

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           +I  ++ G NHS F+ + G ++TCG  T GQLGH   R  + P ++ +  ++++  +ACG
Sbjct: 36  SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACG 93

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
             HSL L       Q++ +G+G  GQLG +     SV++P++   L+   I+ +S     
Sbjct: 94  ESHSLALSDQ---GQLFSWGAGSDGQLGHTTTE-DSVAIPRLIKKLNQQMILQVSCGNWH 149

Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLT 295
             AL+A+G  +TWG+  N    +   +  PS  S            +Q A G  H   L+
Sbjct: 150 CMALAADGQFFTWGQ--NRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
             G V   G ++ G L   +      P  V L +       KV+ I+ G EH+AV+T   
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ-----KVVYISCGEEHTAVLT--- 259

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDE 413
                                  ++  + T+G G  GQLG  +  D+++P+ V   +G E
Sbjct: 260 -----------------------KSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSE 296

Query: 414 FQN----RDTQLEVFCGSGFTYAI 433
                  R   L     SG  YA 
Sbjct: 297 VTQIACGRQHTLAFVPSSGLIYAF 320



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 46/243 (18%)

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
           ++++ ++ACG  HS+ LL+D    +VY  G   +GQLG  ++  +    P+    L D  
Sbjct: 34  DRSIKEVACGGNHSIFLLED---GEVYTCGLNTKGQLGHEREGNK----PEQIGALADQH 86

Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS---FSQAALG 287
           I+ ++     S ALS +G L++WG G +      +T D      L   L+     Q + G
Sbjct: 87  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H + L  DG+    G + HG L     +    P   + ++V +L+G+ + Q+AAG  H
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLG----LGKEFPSQASPQRVKSLEGIPLAQVAAGGAH 202

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           S            F +S +               A+  WG    GQLGL +  D+  P  
Sbjct: 203 S------------FALSLS--------------GAVFGWGRNNAGQLGLSDETDRQSPCH 236

Query: 408 VNL 410
           V L
Sbjct: 237 VKL 239



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 266

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 325 RGQLGTG----HTCNVKCPSPVK 343


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 164/404 (40%), Gaps = 60/404 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G   D   P  + +  L  V  ++ G  H LAL        G V+ 
Sbjct: 63  VWAWGYNGFGQLGNGTYKDSCIP--VRVKGLKDVVAVSAGTFHSLALKKD-----GSVWI 115

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQ       D   P  V         I  I+AGW+ S  V   G ++  G    
Sbjct: 116 WGHTNYGQRKSDVYRDFTTPVKVKELK----NIVAIAAGWDFSLAVGSDGSVWAWGINNH 171

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G  +  + PVKV     K+V  ++ G+ HSL L +D     V+ +G  + G+LG 
Sbjct: 172 GELGIGSLKPSAVPVKVKGL--KDVVAVSAGLYHSLALKRD---GTVWSWGYNEDGELGN 226

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
                 +VS+P    GL D  ++ ISA G  S AL+ +G ++ WG G    +       +
Sbjct: 227 RPTEDYTVSVPVRVKGLSD--VIAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYI 284

Query: 276 PSSLSFSQA----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
           P  + +       A G+ H + L  DG V + G + +G+L       S  P+ V   K  
Sbjct: 285 PVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLK-- 342

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
                 V+ +AAG  HS  +T                          +N  I  WG    
Sbjct: 343 -----NVVAVAAGRLHSVALT--------------------------KNGTIWAWGNNAF 371

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           GQLG  N    +     NL  + +  D  + +  G   T AI R
Sbjct: 372 GQLGRENNSFSL-----NLPYKVKWLDNVVAIAAGGSHTLAIKR 410



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 37/325 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG   DG+LG     D      + +  LS V  ++ GG H +AL        G V+ 
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKD-----GAVWI 267

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G   +  +G++ ++  P  + + +     +  I+AG+ HS  + D G ++  G  ++
Sbjct: 268 WGGGIIEK--NGKIDNSYIPVRIRWLN----KVVAIAAGYRHSIALKDDGTVWVWGHNSY 321

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LG         PV+V     KNV  +A G  HS+ L K+     ++ +G+   GQLG 
Sbjct: 322 GVLGSNVGEHSFLPVQVKGL--KNVVAVAAGRLHSVALTKN---GTIWAWGNNAFGQLGR 376

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------FNST 266
             +   S++LP     L +  +V I+A G  + A+  +G +++WG           + S+
Sbjct: 377 ENNSF-SLNLPYKVKWLDN--VVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSS 433

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C + L  ++     +    H L +  DG V +  G    + S+        PL + 
Sbjct: 434 YIPTCVKGLNKAVLVEAGS---QHSLAVDKDGTVWVW-GFIESVWSEKNTKDILSPLPIK 489

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVV 351
           + K+++     + +IA G ++  V+
Sbjct: 490 IGKLND-----ITEIAGGLDYILVL 509



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 134/326 (41%), Gaps = 40/326 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWGA   GQLG G       P  +    L+   ++  G  H LA+        G V+ 
Sbjct: 414 VWSWGANNKGQLGNGTYKSSYIPTCV--KGLNKAVLVEAGSQHSLAVDKD-----GTVWV 466

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG-DGT 154
           WG   S         D L P P+    G    IT I+ G ++   +   G ++ CG D  
Sbjct: 467 WGFIES-VWSEKNTKDILSPLPIKI--GKLNDITEIAGGLDYILVLRKDGNIWGCGNDFY 523

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           F +       S +  +++ +   KNV  IA G  HSL +  D     V+ +G        
Sbjct: 524 FRKFTDSSVSSVTKLIRLDNI--KNVRSIAAGYFHSLAVRTD---GTVWSWGDTNLD--- 575

Query: 215 VSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNS 265
            +K++  + S   V I GL  +  V ++A    S AL  +G +++WG         G   
Sbjct: 576 -NKEKYLNFSEKPVKIKGLSGV--VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRE 632

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           TS V  P  +    +    A G  H + L  DG V + G +  G L       ST PL V
Sbjct: 633 TSFV--PVRVKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKV 690

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVV 351
             EK+ N     V+ IAAG  HS  +
Sbjct: 691 --EKLDN-----VVAIAAGDTHSVAL 709



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 27/228 (11%)

Query: 59  QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
           +L+ L ++ +V  +A G  H LA+ +      G V+SWG      L + E       KPV
Sbjct: 537 KLIRLDNIKNVRSIAAGYFHSLAVRTD-----GTVWSWG---DTNLDNKEKYLNFSEKPV 588

Query: 119 TF--FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
                 G    +  ++AG  HS  +   G +++ G   +GQLG+G   +   PV+V    
Sbjct: 589 KIKGLSG----VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL- 643

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
             NV  IA G  HS+ L KD     V+ +GS  RGQLG      R++    V + +  ++
Sbjct: 644 -NNVVAIAAGDYHSMALKKD---GTVWVWGSNIRGQLGR-----RNIEFSTVPLKVEKLD 694

Query: 237 -IVGISANGDRSAALSAEGHLYTWGRGFNS--TSDVNCPQSLPSSLSF 281
            +V I+A    S AL  +G ++ WG   +   + ++    S+P  + F
Sbjct: 695 NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSSSSIPVQIKF 742



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 20/234 (8%)

Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
             G  + +    AG  H+  + D G ++  G   FGQLG+G Y+    PV+V     K+V
Sbjct: 37  LQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGL--KDV 94

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
             ++ G  HSL L KD     V+ +G    GQ     D  R  + P     L +  IV I
Sbjct: 95  VAVSAGTFHSLALKKD---GSVWIWGHTNYGQR--KSDVYRDFTTPVKVKELKN--IVAI 147

Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
           +A  D S A+ ++G ++ WG       G  S      P  +         + G  H L L
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLAL 207

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             DG V   G +  G L +      T  + V ++ +S+     VI I+AG  HS
Sbjct: 208 KRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-----VIAISAGGFHS 256



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 11/137 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG    GQLG G       P  + +  L++V  +A G  H +AL        G V+ 
Sbjct: 615 VWSWGYNAYGQLGNGTRETSFVP--VRVKGLNNVVAIAAGDYHSMALKKD-----GTVWV 667

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG   +  +  P  V   D     +  I+AG  HS  +   G ++  G    
Sbjct: 668 WGSNIRGQLGRRNIEFSTVPLKVEKLD----NVVAIAAGDTHSVALKKDGTVWVWGIECD 723

Query: 156 GQLGHGDYRSHSSPVKV 172
             L      S S PV++
Sbjct: 724 RDLSKEILSSSSIPVQI 740


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 162/391 (41%), Gaps = 63/391 (16%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           SV  + CGG H   LT       G++F+WGRG  G+LGHG       P+ +   +G    
Sbjct: 272 SVQQVCCGGQHAAVLTDC-----GEIFTWGRGGFGRLGHGNREGLESPRRIEALEG--IP 324

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
              ++ G+ ++  V+ SG L+T G G  G+LG GD     +P +V    +K V ++  G 
Sbjct: 325 CVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSK-VKEVYAGS 383

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDR 246
            HS VL ++     VY FG  +    G  +D +    +P  + G    +  + +   G  
Sbjct: 384 VHSCVLTRE---GTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYH 440

Query: 247 SAALSAEGHLYTW----------GRGFNSTSDVNCPQSLPS--------SLSFSQAALGW 288
           + AL+ +G +Y W          G  F    ++     LPS         ++  +   GW
Sbjct: 441 TMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGW 500

Query: 289 NHVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTR---PLSVALEKVSNLDGVKVIQIAA 343
            H   LT DG++ + G ++ G   L  P+         P       +  L  +K+ QIA 
Sbjct: 501 GHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIAC 560

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI 403
           G EHS  V                          AEN  + ++G G+ GQLG  +T  + 
Sbjct: 561 GGEHSVAV--------------------------AENGEVWSFGAGQKGQLGHESTTRED 594

Query: 404 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            P++V        R   + V CG+  T  ++
Sbjct: 595 FPRLVQALK--STRREIMHVACGNNCTLVLA 623



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 149/359 (41%), Gaps = 43/359 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G  G+LG G      SP+ +          +ACG A+  A+T+      G+++
Sbjct: 291 EIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTA-----SGELY 345

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G +G+LG G++ D   P  V   +G    +  + AG  HS  ++  G ++  G   
Sbjct: 346 TWGAGENGRLGLGDVADRHTPSRV---EGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHE 402

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKN---VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +   GHGD+     P  + +F   +   V QI+ G      +   C G QVY +G  +  
Sbjct: 403 Y--TGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQG-QVYAWGHNRVA 459

Query: 212 QLGVSKDRIRSVSL--------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
           QLG+        ++        PQ+   L  + IV + A    SAAL+ +G LY  GR +
Sbjct: 460 QLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNY 519

Query: 264 NSTSDVNCPQSLPSS------------------LSFSQAALGWNHVLVLTGDGEVLMLGG 305
                +  PQ  P +                  L   Q A G  H + +  +GEV   G 
Sbjct: 520 QGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGA 579

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
              G L          P  V   K +  +   ++ +A G   + V+ G   +  LF ++
Sbjct: 580 GQKGQLGHESTTREDFPRLVQALKSTRRE---IMHVACGNNCTLVLAGGVAFPTLFEMT 635


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 181/413 (43%), Gaps = 99/413 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG  + G+LG G   + + P L+   + S+V  +ACG  H  A+T     + G+++
Sbjct: 362 EMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVT-----MAGEIY 416

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK +    +G    +  ++ G  H+  ++ +G LFT G
Sbjct: 417 TWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEG--LQVAFVTCGPWHTALITSTGQLFTFG 474

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD  + S P +V S        +ACG+ H+  +                  
Sbjct: 475 DGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAI------------------ 516

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----- 266
                                  +E++   +    SA++S+ G L+TWG G  +      
Sbjct: 517 -----------------------VEVIVTQS----SASISS-GKLFTWGDGDKNRLGHGD 548

Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            D     +  S+L   +F + A G +  + LT  G V  +G + +G L +P+   S   L
Sbjct: 549 KDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQ---SDGKL 605

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
              +E    L G  V +IA GA H  V+T +                            +
Sbjct: 606 PCLVE--DKLAGECVEEIACGAYHVTVLTSR--------------------------NEV 637

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS ++ AI  H
Sbjct: 638 YTWGKGANGRLGHGDVEDRKTPTLV---EALKDRHVKY-IACGSNYSAAICLH 686



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 120/305 (39%), Gaps = 78/305 (25%)

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
            D L PKP+         +  I+ G  H+  V+  G +FT G+ + G+LGHG  ++   P
Sbjct: 328 TDILLPKPLE--SNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQP 385

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS--L 225
             V +  +  V  +ACG  H+  +    +  ++Y +G G    G LG   D    VS  +
Sbjct: 386 CLVEALASSTVDFVACGEFHTCAV---TMAGEIYTWGDGTHNAGLLGHGTD----VSHWI 438

Query: 226 PQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
           P+   G L  +++  ++     +A +++ G L+T+                         
Sbjct: 439 PKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTF------------------------- 473

Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
                      GDG   +LG   HG   D E +S  R       +V +L G++ + +A G
Sbjct: 474 -----------GDGTFGVLG---HG---DRENISYPR-------EVESLSGLRTVSVACG 509

Query: 345 AEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH 404
             H+A +           IS    F               TWG G+  +LG G+   ++ 
Sbjct: 510 VWHTAAIVEVIVTQSSASISSGKLF---------------TWGDGDKNRLGHGDKDARLE 554

Query: 405 PKVVN 409
           P  ++
Sbjct: 555 PTCIS 559


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 180/410 (43%), Gaps = 100/410 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P L+   ++S+V  +ACG  H  A+T+      G+++
Sbjct: 112 EVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTT-----AGELY 166

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  +    PK ++   +G +  + ++S G  H+  ++ +G LFT G
Sbjct: 167 TWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQ--VAYVSCGTWHTALITSTGQLFTFG 224

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHG+  S   P +V S        +ACG+ H+  +++  +          +++
Sbjct: 225 DGTFGVLGHGNRESIPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLF 284

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G + +LG                            +GD+   +             
Sbjct: 285 TWGDGDKHRLG----------------------------HGDKEPRVKP----------- 305

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                  C  SL     F + A G +  + LT  G+V  +G + +G L +P R     P 
Sbjct: 306 ------TCVASL-IDYDFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNP-RSDGKLPC 357

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            V      ++ G  V+Q+A G+ H AV+T K                            +
Sbjct: 358 LV-----EDIMGENVVQVACGSYHVAVLTVKSE--------------------------V 386

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            TWG G +G+LG G+  D+  P +V +    ++R  +  + CG+ FT AI
Sbjct: 387 FTWGKGANGRLGHGDIEDRKIPTLVEV---LRDRGVR-HIACGANFTAAI 432


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 162/338 (47%), Gaps = 37/338 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G + D + P+++   + SS+  +ACG  H  A+T     I G+++
Sbjct: 301 EVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVT-----ITGELY 355

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK V+   +G    +T ++ G  H+  V+  G LFT G
Sbjct: 356 TWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEG--LQVTSVTCGPWHTALVTSMGQLFTFG 413

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHGD  + S P +V S        +ACG+ H+  +++  +          +++
Sbjct: 414 DGTFGALGHGDRENISYPKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLF 473

Query: 204 GFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
            +G G + +L  G  + R++   +P     L D +   ++     +  L+  G +++   
Sbjct: 474 TWGDGDKNRLGHGDKEPRLKPTCVP----ALIDYDFHKVACGHSITVGLTTSGQVFSMGS 529

Query: 259 --WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
             +G+  N ++D   P  +   L   S  + + G  HV+VLT   EV   G   +G L  
Sbjct: 530 TVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGH 589

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            +      P  V       L    V  IA G+ ++A +
Sbjct: 590 GDVEDRKTPTLVEA-----LKDRHVKYIACGSNYTAAI 622



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 181/405 (44%), Gaps = 69/405 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  +  +ACG  H   +T       G+VF+WG  S G+LGHG + D +
Sbjct: 268 DVLLPRPLESNIVLDIHHIACGVRHAALVTRQ-----GEVFTWGEESGGRLGHGVVKDVI 322

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
            P+ V        +I  ++ G  H+  V+ +G L+T GDGT   G LGHG   SH  P +
Sbjct: 323 QPRMVESLAAS--SIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKR 380

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           VS  +    V  + CG  H+ ++    +G Q++ FG G  G LG   DR  ++S P+   
Sbjct: 381 VSGPLEGLQVTSVTCGPWHTALVTS--MG-QLFTFGDGTFGALG-HGDR-ENISYPKEVE 435

Query: 231 GLHDIEIVGISANGDRSAAL-----------SAEGHLYTWGRGFNS------TSDVNCPQ 273
            L  +  + ++     +AA+            + G L+TWG G  +            P 
Sbjct: 436 SLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPT 495

Query: 274 SLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            +P+     F + A G +  + LT  G+V  +G + +G L +P   S+   +   +E   
Sbjct: 496 CVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNP---SADGKIPCLVE--D 550

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L G  V +++ GA H  V+T K                            + TWG G +
Sbjct: 551 KLFGESVEEVSCGAYHVVVLTSK--------------------------NEVYTWGKGAN 584

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G+LG G+  D+  P +V   +  ++R  +  + CGS +T AI  H
Sbjct: 585 GRLGHGDVEDRKTPTLV---EALKDRHVKY-IACGSNYTAAICLH 625


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 163/386 (42%), Gaps = 54/386 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG  + GQLG G + DE  L+P  +  +  S++  +ACG  H L LTS      G+
Sbjct: 6   ELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTS-----SGR 60

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++ G     QLGH    D    +P+   +   Y +  I+ G  HS  +S+ G + + GD
Sbjct: 61  VYACGSNDHSQLGH----DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGD 116

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLG   D      P  V   V+K V QIACG  HSL  L  C   ++Y +GS   G
Sbjct: 117 NDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173

Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QLGV+  + +   + P     L  I +  I+  G+ S  +S    ++ WGR      G N
Sbjct: 174 QLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLN 233

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +  + P  L +  +L     A G    + LT +G V   G   +G L      +   P
Sbjct: 234 DETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLP 293

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                  V  L G  + Q+A G  H+                         + ++     
Sbjct: 294 -----RMVMELMGSTITQVACGNRHT-------------------------LALVPSRGR 323

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  +G G  GQLG  +T     P+VV
Sbjct: 324 VYGFGLGSSGQLGTRSTKSLTLPQVV 349



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 105/200 (52%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG     +   S Q + L++L    V+ +ACGG H   ++  S+V G 
Sbjct: 163 ELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFG- 221

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
               WGR + GQLG  +     YP  +         +  ++ G   S F+++ G +FTCG
Sbjct: 222 ----WGRNNCGQLGLNDETSRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VYGFG G  G
Sbjct: 276 AGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYGFGLGSSG 333

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG      +S++LPQV IG
Sbjct: 334 QLGTRS--TKSLTLPQVVIG 351



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 143/330 (43%), Gaps = 48/330 (14%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G +++ WG  S GQLG G + D     P          I  ++ G  H+ F++ SG ++ 
Sbjct: 4   GTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYA 63

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG     QLGH        P+ +   ++  V QIACG RHS+ L +     QV  +G   
Sbjct: 64  CGSNDHSQLGHD--LPTKRPLLIPELLDYVVVQIACGSRHSMALSE---WGQVLSWGDND 118

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQLG + D+   V LP++   L    +V I+   + S AL++ G LY+WG       G 
Sbjct: 119 CGQLGQATDQ-DIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           N+  +V   N P  L + L    AA+  G NH  +++    V   G ++ G L   +  S
Sbjct: 178 NTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETS 237

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            + P      ++  L  + V  +A G E S  +T +                        
Sbjct: 238 RSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNE------------------------ 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
               + T G G +GQLG G   +++ P++V
Sbjct: 269 --GGVFTCGAGAYGQLGHGFGANEMLPRMV 296



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 124/294 (42%), Gaps = 65/294 (22%)

Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           L+  G+ + GQLG G        +P +V    +  + Q+ACG RH+L L       +VY 
Sbjct: 7   LYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTS---SGRVYA 63

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
            GS    QLG      R + +P+    L D  +V I+     S ALS  G + +WG    
Sbjct: 64  CGSNDHSQLGHDLPTKRPLLIPE----LLDYVVVQIACGSRHSMALSEWGQVLSWGDNDC 119

Query: 263 --FNSTSDVNCPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--S 312
                 +D +  Q LP       S +  Q A G NH L LT  GE+   G + +G L  +
Sbjct: 120 GQLGQATDQDIVQ-LPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 178

Query: 313 DPERVS-STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
            P+ V+ S +P+     +++ L G+ V  IA G  HS            FIIS       
Sbjct: 179 TPKEVTHSNQPV-----RLTTLLGIPVAAIACGGNHS------------FIIS------- 214

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-----------KVVNLGDEF 414
                  ++ A+  WG    GQLGL +   + +P           + V  GDEF
Sbjct: 215 -------KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEF 261


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 161/382 (42%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +     +V  + CG  H + +        G V++ 
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +F+ G   +G
Sbjct: 59  GCNDLGQLGHDK--SRRKPEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114

Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           Q+G      +   P  + S  +  + Q+ACG  HSL L KD   + ++ +G  + GQLG+
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKD---SDIFSWGQNQYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             + I+    P+    L  I    I+A G  S AL+  G ++ WGR      G    +D 
Sbjct: 172 GLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           N P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H+              +++ P            +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHT--------------LAFVP-----------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTINRKSPFTVK 342



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 14/182 (7%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           ++SWG    GQLG G  +  E +P+  ++ SLS +    +A GG H  ALT     I G 
Sbjct: 158 IFSWGQNQYGQLGLGLEIKKECAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WGR   GQLG  +  D   P  +      +  I HI  G +H+  ++  G +FT G 
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQK--IIHICCGEDHTAALTKEGGVFTFGA 268

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH       +P KV   +   V QIACG +H+L  +      ++Y FG G  GQ
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326

Query: 213 LG 214
           LG
Sbjct: 327 LG 328



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 29/323 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V++ G    GQLG    HD+    P+ +       +  ++CG AH LAL        G+V
Sbjct: 55  VYTCGCNDLGQLG----HDKSRRKPEQVGALDAQIIVAVSCGEAHTLALND-----KGQV 105

Query: 94  FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FSWG    GQ+G     + +  P+ +         I  ++ G +HS  +S    +F+ G 
Sbjct: 106 FSWGHAVYGQIGLSTAEEYIRVPRNIKSLSD--VQIVQVACGHHHSLALSKDSDIFSWGQ 163

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             +GQLG G + +   +P  + S        IA G  HS  L    +   ++G+G  K G
Sbjct: 164 NQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL---TISGAIFGWGRNKFG 220

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG++ +  R+V  P +   L   +I+ I    D +AAL+ EG ++T+G       G NS
Sbjct: 221 QLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRP 322
           T+    P+ +   +    +Q A G  H L      G +   G   +G L     ++   P
Sbjct: 279 TNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSP 338

Query: 323 LSVALEKVSNLDGVKVIQIAAGA 345
            +V    ++  D V+ +  A G 
Sbjct: 339 FTVKGNWLTYEDYVRHLPEANGC 361



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQ+G     + +  P+  N+ SLS V +  +ACG  H LAL+  S     
Sbjct: 104 QVFSWGHAVYGQIGLSTAEEYIRVPR--NIKSLSDVQIVQVACGHHHSLALSKDSD---- 157

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            +FSWG+   GQLG G E+     P+ +    G  +   HI+AG  HS  ++ SG +F  
Sbjct: 158 -IFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPF--AHIAAGGGHSFALTISGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D    + P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 12/119 (10%)

Query: 5   LMEETEKGKSALINNAKP-KIEE----EEEEQQVVK---VWSWGAGTDGQLGTGRLHDEL 56
           L +ET++   AL+ + +  KI      E+    + K   V+++GAG  GQLG    + E+
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
           +P+ +     S V+ +ACG  H LA   PSS   G+++S+G G +GQLG G  ++   P
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAFV-PSS---GRIYSFGLGGNGQLGTGSTINRKSP 338


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 33/336 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG  + G+LG G   D   P+L+   + ++   +ACG  H  A+T     + G +F
Sbjct: 327 EVFCWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVT-----LSGDLF 381

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  S G LGHG  +    PK V    +G R  ++ ++ G  H+  V+ +G LFT G
Sbjct: 382 TWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIR--VSSVACGVWHTALVTSAGQLFTFG 439

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG--------NQVY 203
           DGTFG LGHGD RS + P +V S       ++ACG+ H+  +++  +G         +++
Sbjct: 440 DGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLF 499

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
            +G G +G+LG      + V  P     L D     ++     + AL+  G ++T G   
Sbjct: 500 TWGDGDKGRLGHGDKEQKLV--PTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSL 557

Query: 263 FNSTSDVNCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           +    DV     LP  +          + A G  HV VLT   EV   G   +G L   +
Sbjct: 558 YGQLGDVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGD 617

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            +    P       V  L   +V  +A G+  +A +
Sbjct: 618 VMDRNTPT-----LVEALKEKQVKSVACGSGFTAAI 648



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 153/420 (36%), Gaps = 117/420 (27%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           G VF WG  S G    G   D+L PK +      D H     HI+ G  H+  V+  G +
Sbjct: 275 GDVFLWGE-SVGSGDGGIKTDSLLPKALESAVVLDVH-----HIACGNRHAALVTKQGEV 328

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS--LVLLKDCL----GNQ 201
           F  GD + G+LGHG     + P  V +    N   +ACG  HS  + L  D      G  
Sbjct: 329 FCWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTH 388

Query: 202 VYG----------------------------------------------FGSGKRGQLGV 215
            YG                                              FG G  G LG 
Sbjct: 389 SYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGH 448

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-----------SAEGHLYTWGR--- 261
                RSV+LP+    L  ++ V ++     +AA+            + G L+TWG    
Sbjct: 449 GDK--RSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDK 506

Query: 262 ---GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
              G         P  + +    +F Q A G    + LT +G V  +G S +G L D   
Sbjct: 507 GRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGD--- 563

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
           V +   L   +E    L    V +IA GA H AV+T K                      
Sbjct: 564 VRADGKLPGLVE--GRLWEAFVEEIACGAYHVAVLTAKTE-------------------- 601

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
                 + TWG G +G+LG G+  D+  P +V    E Q +     V CGSGFT AI  H
Sbjct: 602 ------VYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKS----VACGSGFTAAICLH 651


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 161/382 (42%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +     +V  + CG  H + +        G V++ 
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +F+ G   +G
Sbjct: 59  GCNDLGQLGHDK--SRRKPEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114

Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           Q+G      +   P  + S  +  + Q+ACG  HSL L KD   + ++ +G  + GQLG+
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKD---SDIFSWGQNQYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             + I+    P+    L  I    I+A G  S AL+  G ++ WGR      G    +D 
Sbjct: 172 GLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           N P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H+              +++ P            +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHT--------------LAFVP-----------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTINRKSPFTVK 342



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 14/182 (7%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           ++SWG    GQLG G  +  E +P+  ++ SLS +    +A GG H  ALT     I G 
Sbjct: 158 IFSWGQNQYGQLGLGLEIKKECAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WGR   GQLG  +  D   P  +      +  I HI  G +H+  ++  G +FT G 
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQK--IIHICCGEDHTAALTKEGGVFTFGA 268

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH       +P KV   +   V QIACG +H+L  +      ++Y FG G  GQ
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326

Query: 213 LG 214
           LG
Sbjct: 327 LG 328



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 29/323 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V++ G    GQLG    HD+    P+ +       +  ++CG AH LAL        G+V
Sbjct: 55  VYTCGCNDLGQLG----HDKSRRKPEQVGALDAQIIVAVSCGEAHTLALND-----KGQV 105

Query: 94  FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FSWG    GQ+G     + +  P+ +         I  ++ G +HS  +S    +F+ G 
Sbjct: 106 FSWGHAVYGQIGLSTAEEYIRVPRNIKSLSD--VQIVQVACGHHHSLALSKDSDIFSWGQ 163

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             +GQLG G + +   +P  + S        IA G  HS  L    +   ++G+G  K G
Sbjct: 164 NQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL---TISGAIFGWGRNKFG 220

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG++ +  R+V  P +   L   +I+ I    D +AAL+ EG ++T+G       G NS
Sbjct: 221 QLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRP 322
           T+    P+ +   +    +Q A G  H L      G +   G   +G L     ++   P
Sbjct: 279 TNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSP 338

Query: 323 LSVALEKVSNLDGVKVIQIAAGA 345
            +V    ++  D V+ +  A G 
Sbjct: 339 FTVKGNWLTYEDYVRHLPEANGC 361



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQ+G     + +  P+  N+ SLS V +  +ACG  H LAL+  S     
Sbjct: 104 QVFSWGHAVYGQIGLSTAEEYIRVPR--NIKSLSDVQIVQVACGHHHSLALSKDSD---- 157

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            +FSWG+   GQLG G E+     P+ +    G  +   HI+AG  HS  ++ SG +F  
Sbjct: 158 -IFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPF--AHIAAGGGHSFALTISGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D    + P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 12/119 (10%)

Query: 5   LMEETEKGKSALINNAKP-KIEE----EEEEQQVVK---VWSWGAGTDGQLGTGRLHDEL 56
           L +ET++   AL+ + +  KI      E+    + K   V+++GAG  GQLG    + E+
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
           +P+ +     S V+ +ACG  H LA   PSS   G+++S+G G +GQLG G  ++   P
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAFV-PSS---GRIYSFGLGGNGQLGTGSTINRKSP 338


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 147/327 (44%), Gaps = 50/327 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +  WG  S GQ G G  +  + P+P  +   H   +  ++ G NHS F+ + G ++TCG 
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            T GQLGH      S P ++ +   +++  +ACG  HS+ L       Q++ +G+G  GQ
Sbjct: 61  NTKGQLGHD--CEGSKPEQIGALAGQHIVHVACGESHSVALSDQ---GQLFSWGAGSDGQ 115

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG++     +V++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +   
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172

Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           +  PS  S            +Q A G  H   L+  G V   G +  G L   +      
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P  V L     L   KV+ I+ G EH+AV+T                          ++ 
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLT--------------------------KSG 261

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + T+G G  GQLG  +  D+++P+ V
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNPRRV 288



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 155/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G G     +   PQ+       +V  +ACGG H + L        G+V++ 
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G  + GQLGH    +   P+ +    G    I H++ G +HS  +SD G LF+ G G+ G
Sbjct: 59  GLNTKGQLGHD--CEGSKPEQIGALAGQH--IVHVACGESHSVALSDQGQLFSWGAGSDG 114

Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG        + P  +     + + Q++CG  H L L  D    Q + +G    GQLG+
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAAD---GQFFTWGQNSYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
            K+     S PQ    L  I +  ++A G  S ALS  G ++ WG+      G +   D 
Sbjct: 172 GKECPSQAS-PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230

Query: 270 N--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              C   L  S      + G  H  VLT  G V   G    G L          P     
Sbjct: 231 ESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +V  L G +V QIA G  H+              +++ P            +  I  +G
Sbjct: 286 RRVLELMGSEVSQIACGRHHT--------------LAFVP-----------SSGMIYAFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G+TC+   P  V 
Sbjct: 321 CGTRGQLGTGHTCNVKCPSPVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ SSGQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG  H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 136/289 (47%), Gaps = 27/289 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++ G  T GQLG    HD     P+ +   +   +  +ACG +H +AL+       G+
Sbjct: 54  EVYTCGLNTKGQLG----HDCEGSKPEQIGALAGQHIVHVACGESHSVALSD-----QGQ 104

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +FSWG GS GQLG   + DA+   P      ++ TI  +S G  H   ++  G  FT G 
Sbjct: 105 LFSWGAGSDGQLGLTTIEDAV-TVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ 163

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            ++GQLG G +  S +SP +V S     + Q+A G  HS  L    L   V+G+G    G
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---SLSGAVFGWGKNSSG 220

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG+S +R R    P     L   ++V IS   + +A L+  G ++T+G       G +S
Sbjct: 221 QLGLSDERDRES--PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS 278

Query: 266 TSDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
            +D   P+ +   +    SQ A G +H L      G +   G    G L
Sbjct: 279 MNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG  + GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    ++ I+ G +H+  FV  SG ++  G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 152/369 (41%), Gaps = 53/369 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WG   DGQLG G   + +  P+  N+ +   +  + CGG H + L        G V++ G
Sbjct: 4   WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLH-----DGSVYTCG 58

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             S GQLGH +    + P+ V   D  +  IT +S G  HS  V++ G +F  G G  GQ
Sbjct: 59  SNSCGQLGHNK--PGITPEFVGALDTQK--ITLVSCGQAHSLAVNEQGQVFAWGAGEEGQ 114

Query: 158 LGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           LG G   +    P  +    +  + Q+ CG +H + L KD    Q++ +G    GQLG+ 
Sbjct: 115 LGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKD---GQLFTWGQNTSGQLGLG 171

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD-- 268
           K     +  PQ    L  I +  I+A GD S ALS  G ++ WG+      G N   D  
Sbjct: 172 KGEPSKL-FPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRA 230

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           V C      S      + G  H   LT DG +   G    G L      +   P      
Sbjct: 231 VPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLP-----R 285

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L G +V QI  G  H+              +++ P            +  +  +G 
Sbjct: 286 RVLELMGTEVSQITCGRHHT--------------LAFAP-----------SSGGVYAFGC 320

Query: 389 GEHGQLGLG 397
             HGQLG G
Sbjct: 321 NSHGQLGTG 329



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  T GQLG G+    +L PQ L   +   ++ +  GG H  AL+     + G V
Sbjct: 156 QLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALS-----LSGAV 210

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+  +GQLG  ++ D   P  + F    +  + HIS G  H+  ++  G LFT GDG
Sbjct: 211 FGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQK--VVHISCGEEHTAALTKDGGLFTFGDG 268

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++GQLGHG   +   P +V   +   V QI CG  H+L       G  VY FG    GQL
Sbjct: 269 SWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGG--VYAFGCNSHGQL 326

Query: 214 G 214
           G
Sbjct: 327 G 327



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 150/327 (45%), Gaps = 25/327 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G+ + GQLG  +    ++P+ +       +++++CG AH LA+        G+VF+
Sbjct: 54  VYTCGSNSCGQLGHNK--PGITPEFVGALDTQKITLVSCGQAHSLAVNE-----QGQVFA 106

Query: 96  WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG G  GQLG G    A+  P+ +     HR  I  +  G  H   +S  G LFT G  T
Sbjct: 107 WGAGEEGQLGLGTTETAVRIPRLIKRLCDHR--IAQVMCGNQHCIALSKDGQLFTWGQNT 164

Query: 155 FGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G    S   P  + S     + +I  G  HS  L    L   V+G+G  K GQL
Sbjct: 165 SGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFAL---SLSGAVFGWGKNKAGQL 221

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR-GFNSTS 267
           G++  + R+V  P     L   ++V IS   + +AAL+ +G L+T     WG+ G  ST+
Sbjct: 222 GLNDIQDRAV--PCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTA 279

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           +   P+ +   +    SQ   G +H L      G V   G + HG L      +   P  
Sbjct: 280 NELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSPYP 339

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +    +S      V +I  G +HS ++
Sbjct: 340 LKTSFLSGSIHGTVTKITCGGDHSFLL 366



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 15/229 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WGAG +GQLG G     +  P+L+       ++ + CG  H +AL+       G++
Sbjct: 103 QVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSK-----DGQL 157

Query: 94  FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG+ +SGQLG G+     L+P+P+    G    +  I+AG +HS  +S SG +F  G 
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPQPLKSLAG--IPLAKITAGGDHSFALSLSGAVFGWGK 215

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG  D +  + P  +    ++ V  I+CG  H+  L KD     ++ FG G  GQ
Sbjct: 216 NKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKD---GGLFTFGDGSWGQ 272

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWG 260
           LG       +  LP+  + L   E+  I+     + A + + G +Y +G
Sbjct: 273 LG--HGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFG 319



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 53/328 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG+   GQLG G   + ++ P+    F G    +  I  G  HS F+   G ++TCG
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGR--GLKEIVCGGQHSVFLLHDGSVYTCG 58

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             + GQLGH   +   +P  V +   + +  ++CG  HSL + +     QV+ +G+G+ G
Sbjct: 59  SNSCGQLGHN--KPGITPEFVGALDTQKITLVSCGQAHSLAVNEQ---GQVFAWGAGEEG 113

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      +V +P++   L D  I  +        ALS +G L+TWG+  N++  +  
Sbjct: 114 QLGLGTTET-AVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQ--NTSGQLGL 170

Query: 272 PQSLPSSL-----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS L             ++   G +H   L+  G V   G +  G L   +     
Sbjct: 171 GKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRA 230

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  +       L   KV+ I+ G EH+A +T                          ++
Sbjct: 231 VPCHIKF-----LRSQKVVHISCGEEHTAALT--------------------------KD 259

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G  GQLG G+T +++ P+ V
Sbjct: 260 GGLFTFGDGSWGQLGHGSTANELLPRRV 287


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 141/303 (46%), Gaps = 38/303 (12%)

Query: 36   VWSWGAGTDGQ-----LGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
            V+ WG G         LG  ++ D+L P +L +LS + SVS+  C GA V A        
Sbjct: 770  VYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRA-------- 821

Query: 90   GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
             G++ +WG G +GQLGHG+  + + PK +       + IT +  G  H+  ++ +G +++
Sbjct: 822  NGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTS--FWITQVQCGEKHTICLTKNGKVYS 879

Query: 150  CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
             G   +GQLG GD   HSSP++VS+    NV QIA G  H  VL       +V  FG+G 
Sbjct: 880  WGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVL---TTSKEVLVFGNG- 935

Query: 210  RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
               +G +      VSLP +   L  + I  +      +AA++  G +YTWG G       
Sbjct: 936  -AAMGAAS----VVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGG 990

Query: 270  NCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-------SDPER 316
            N  ++ P  +      S  Q + G  H   LT  G +   G    G L       + P+R
Sbjct: 991  NSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKPKR 1050

Query: 317  VSS 319
            + S
Sbjct: 1051 IES 1053



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 82/205 (40%), Gaps = 52/205 (25%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI----- 89
            KV+SWGA   GQLG G +    SP  ++     +V  +A G  H   LT+   V+     
Sbjct: 876  KVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935

Query: 90   --------------------------------------GGKVFSWGRGSSGQLGHGEMVD 111
                                                   G V++WG G   +LGHG    
Sbjct: 936  AAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNST 993

Query: 112  ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSSP 169
               PK +        +I  IS G  H+ F++DSG +FTCG  +FGQLG   GD    + P
Sbjct: 994  ETSPKLIEALRNQ--SIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGD---QNKP 1048

Query: 170  VKVSSFVNKNVHQIACGMRHSLVLL 194
             ++ S        ++CG  +++ L 
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVALF 1073



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 43/222 (19%)

Query: 236  EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSF--SQAALG 287
            ++V +S      AA+ A G L TWG G N       T++   P+ + S  SF  +Q   G
Sbjct: 805  DVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCG 864

Query: 288  WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
              H + LT +G+V   G S +G L   +    + P+     +VS L+   V+QIA+G+ H
Sbjct: 865  EKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPM-----QVSALEKYNVLQIASGSTH 919

Query: 348  SAVVTGKFHWVRLF----------IISYTPFFPP-------------FFINVIAENRAIM 384
             AV+T     V +F          ++S     P              +    I E   + 
Sbjct: 920  CAVLTTS-KEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVY 978

Query: 385  TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 426
            TWG G+  +LG G    +  PK++   +  +N+  + ++ CG
Sbjct: 979  TWGTGQ--ELGHGGNSTETSPKLI---EALRNQSIR-QISCG 1014



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +  N  ++TWG GE+GQLG G+T +QI PK++     F     Q    CG   T  ++++
Sbjct: 819 VRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQ----CGEKHTICLTKN 874



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 51/222 (22%)

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
           GF    + Q   + +R+ + ++P         +I  IS+    S+ L+  G +Y WGRG 
Sbjct: 727 GFKVTAKDQSQPTPERLPNFNIP---------DICSISSGSYYSSVLTENGDVYLWGRGA 777

Query: 264 NSTSDVNC---PQSLPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHGMLS 312
             T  V     PQ     L F   +L        G+ H   +  +GE+L  G   +G L 
Sbjct: 778 VKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLG 837

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             +  +   P     + + +L    + Q+  G +H+  +T                    
Sbjct: 838 HGDTNNQIEP-----KIIQSLTSFWITQVQCGEKHTICLT-------------------- 872

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                 +N  + +WG  E+GQLGLG+      P  V+  +++
Sbjct: 873 ------KNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY 908


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 138/295 (46%), Gaps = 27/295 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG  + G+LG G   D   PQL++  + S+V  +ACG  H  A+T       G ++
Sbjct: 143 EVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQ-----SGDLY 197

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  +    PK V    +G R  ++ ++ G  H+  V+ +G LF+ G
Sbjct: 198 TWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVR--VSSVACGPWHTVLVTSTGQLFSFG 255

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK---------DCLGNQV 202
           DGTFG LGHGD +S S P +V S       + ACG  H+  +++           L  ++
Sbjct: 256 DGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKL 315

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
           + +G G + +LG      + V  P     L D     ++     + AL+  GHLYT G  
Sbjct: 316 FTWGDGDKNRLGHGDKEQKLV--PTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSV 373

Query: 262 GFNSTSDVNCPQSLPSSLSF-----SQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +    D      LP  L        + + G  HV  LT  G+V   G   +G L
Sbjct: 374 SYGQLGDPQATGRLPGVLRLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRL 428



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 12/174 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G    +L P  +      +   +ACG +  +ALT+      G ++
Sbjct: 314 KLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTT-----GHLY 368

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  S GQLG  +    L   P     G R  I  +S G  H   ++  G + T G G 
Sbjct: 369 TMGSVSYGQLGDPQATGRL---PGVLRLG-RTLIEEVSCGAYHVAALTSKGDVCTWGKGA 424

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            G+LGHGD      P  V +  +K V +++CG   +  +   CL     G G+G
Sbjct: 425 NGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAI---CLHKSGPGVGTG 475



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 152/398 (38%), Gaps = 68/398 (17%)

Query: 91  GKVFSWGRG-----SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           G+++ WG G      + +L      DA  P+ V         +  I+ G  H+  V+  G
Sbjct: 85  GELWMWGEGIGDGGVTKKLDTSFRTDAFLPRAVRSL--VVLDVQQIACGVRHTALVTRQG 142

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            +F+ G+ + G+LGHG     + P  + S  +  V  +ACG  HS  + +      +Y +
Sbjct: 143 EVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQS---GDLYTW 199

Query: 206 GSGKR--GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
           G G    G LG   + I   +  +V   L  + +  ++     +  +++ G L+++G   
Sbjct: 200 GDGTHNFGLLG-HGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGT 258

Query: 262 ----GFNSTSDVNCPQSLPS--SLSFSQAALG-WNHVLVL-----------TGDGEVLML 303
               G       + P+ + S   L   +AA G W+   V+           +  G++   
Sbjct: 259 FGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTW 318

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G      L   ++     P  VA     N       Q+A G   +  +T   H   +  +
Sbjct: 319 GDGDKNRLGHGDKEQKLVPTCVAALVDHNFR-----QVACGHSLTVALTTTGHLYTMGSV 373

Query: 364 SYTPFFPP------------------------FFINVIAENRAIMTWGWGEHGQLGLGNT 399
           SY     P                        + +  +     + TWG G +G+LG G+ 
Sbjct: 374 SYGQLGDPQATGRLPGVLRLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDA 433

Query: 400 CDQIHPKVVNLGDEFQNRDTQL-EVFCGSGFTYAISRH 436
            D+  P +V        RD Q+ +V CGS FT AI  H
Sbjct: 434 EDRDVPTLVEA-----LRDKQVKKVSCGSSFTSAICLH 466


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 174/386 (45%), Gaps = 68/386 (17%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           +ACG  HV  +T       G+VF+WG  S G+LGHG   D   P  V F   +   +  +
Sbjct: 269 IACGVRHVALVTR-----QGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVN--NVDFV 321

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMR 188
           + G  H+  VS SG LFT GDGT   G LGHG   SH  P +VS  +    V  +ACG  
Sbjct: 322 ACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTW 381

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANG 244
           HS +   +    +++ FG G  G LG   DR  SV  P   Q+  GL  I++  G+    
Sbjct: 382 HSALATSN---GKLFTFGDGTFGVLG-HGDR-ESVPYPREVQILSGLKTIKVACGVWHTA 436

Query: 245 DRSAALSAEG------HLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNH 290
                +S  G       L+TWG G          ++  LP+ +S      F Q A G   
Sbjct: 437 AIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTM 496

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            + LT  G V  +GG+ +G L +P  +S  R   +  +K   L G  V +I+ GA H AV
Sbjct: 497 TVALTTSGHVFTMGGTAYGQLGNP--LSDGRLPCLVQDK---LVGEFVEEISCGAYHVAV 551

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
           +T +                            + TWG G +G+LG G+T D+  P  V  
Sbjct: 552 LTSR--------------------------SEVFTWGRGANGRLGHGDTEDRRSPTFV-- 583

Query: 411 GDEFQNRDTQLEVFCGSGFTYAISRH 436
            +  ++R+ +  + CGS FT +I  H
Sbjct: 584 -EALKDRNVK-SISCGSNFTASICIH 607



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 150/321 (46%), Gaps = 29/321 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G  +D   P L+   ++++V  +ACG  H  A+++      G +F
Sbjct: 284 EVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVST-----SGDLF 338

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK V+   +G    +  ++ G  HS   + +G LFT G
Sbjct: 339 TWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEG--LQVLSVACGTWHSALATSNGKLFTFG 396

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  S   P +V         ++ACG+ H+  +++       +    +++ 
Sbjct: 397 DGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFT 456

Query: 205 FGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT----- 258
           +G G + +LG  SK+   +  LP     L D     ++     + AL+  GH++T     
Sbjct: 457 WGDGDKHRLGHGSKE---TYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTA 513

Query: 259 WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           +G+  N  SD   P  +   L      + + G  HV VLT   EV   G   +G L   +
Sbjct: 514 YGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGD 573

Query: 316 RVSSTRPLSVALEKVSNLDGV 336
                 P  V   K  N+  +
Sbjct: 574 TEDRRSPTFVEALKDRNVKSI 594



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   LACG    +ALT+      G VF
Sbjct: 453 KLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTT-----SGHVF 507

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G  + GQLG+    G +   +  K V  F      +  IS G  H   ++    +FT 
Sbjct: 508 TMGGTAYGQLGNPLSDGRLPCLVQDKLVGEF------VEEISCGAYHVAVLTSRSEVFTW 561

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---- 206
           G G  G+LGHGD     SP  V +  ++NV  I+CG   +  +   C+   V G      
Sbjct: 562 GRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI---CIHKWVSGADQSVC 618

Query: 207 SGKRGQLGVSKDR 219
           SG R   G ++ R
Sbjct: 619 SGCRQAFGFTRKR 631


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 176/405 (43%), Gaps = 57/405 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG  ++GQLG G       P  ++L +  ++  L+  G+H +AL +      G ++
Sbjct: 622 SVWTWGENSNGQLGDGTTTARPVPARVSLPA--TLVALSTRGSHTVALDTT-----GMLW 674

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGR  SGQLG+G +V    P+ V  F      +   ++G   +  +   G ++  GD +
Sbjct: 675 AWGRNVSGQLGNGTLVSESTPRRVPSF----ARVQGFASGLRTTFALRADGTVWAWGDNS 730

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG+G   + +SPV V +        +A G +H L +  D     V+ FGS  RGQLG
Sbjct: 731 LGQLGNG--ATSASPVPVQAVGYPRTVPLASGAQHVLAVSSD---GSVFSFGSNSRGQLG 785

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 ++   P+   G   IE V  +A    S ALS +G ++ WG       G  + + 
Sbjct: 786 YEGSATQTS--PRWLTGPECIEAV--AAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +P        A G +H L +  DG V   G +  G L D    S   P+     
Sbjct: 842 RTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPM----- 896

Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTGKFHWV-------RLFIISYTPFFPPFFINVIAEN 380
           +V  L  V V+ +A G+ HS AV      W        +L   + T    P F++ ++  
Sbjct: 897 QVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGV 954

Query: 381 RAI--------------MTWGWGE--HGQLGLGNTCDQIHPKVVN 409
           +AI              + W WG    GQLG G T  +  P  V+
Sbjct: 955 QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVS 999



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 136/327 (41%), Gaps = 39/327 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG        SP    +  ++  + +A G  H LAL S      G V++
Sbjct: 471 VWAWGDNAYGQLGDTSGGRRPSPA--QVPGVAGATEIAAGTYHSLALRSD-----GTVWT 523

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  S GQLG G       P+      G    ITH++AG  HS  +  SG ++  GD  +
Sbjct: 524 WGDNSYGQLGAGATPRG--PRAPAVVPG-LAVITHVAAGLFHSLALDSSGQVWAWGDNVY 580

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S + P +VS      +  I  G  +S+ L  D     V+ +G    GQLG 
Sbjct: 581 GQLGDGSTTSRNVPGRVSGL-PAGIQAIVAGPSYSVALGAD---GSVWTWGENSNGQLGD 636

Query: 216 SKDRIR----SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
                R     VSLP          +V +S  G  + AL   G L+ WGR      G  +
Sbjct: 637 GTTTARPVPARVSLPAT--------LVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGT 688

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
               + P+ +PS       A G      L  DG V   G +  G L +    +S  P   
Sbjct: 689 LVSESTPRRVPSFARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVP--- 745

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVT 352
               V  +   + + +A+GA+H   V+
Sbjct: 746 ----VQAVGYPRTVPLASGAQHVLAVS 768



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 135/294 (45%), Gaps = 27/294 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG  TDGQLG G     +  Q   ++ L+ V+ +A G  H LAL      I G V++
Sbjct: 119 VWTWGTNTDGQLGDGVSQRSVPAQ---VAGLTGVTAIAAGNLHSLAL------INGAVWA 169

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  ++GQLG G       P  V         +  I+AG  HS  +   G ++  G    
Sbjct: 170 WGNNTTGQLGDGSSTSRSTPAKVAGL----TEVVAIAAGDFHSLALKRDGTVWAWGGNYS 225

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S S+PV+VS      +  +A G  HS+      LG +V+ +G    GQLG 
Sbjct: 226 GQLGDGTLDSRSTPVRVSGLT--GIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGN 283

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV--NCPQ 273
             D + S+ LP    GL   ++V +++    S AL  +  ++ WG    + +       Q
Sbjct: 284 GGD-VSSL-LPLEVPGL--TQVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSVQ 339

Query: 274 SLP---SSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +P   S +S +QA A G    LV  GD   L  G +  G L +    SS R L
Sbjct: 340 RVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGS--SSVRAL 391



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 156/374 (41%), Gaps = 63/374 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G L    +P  + +S L+ +  LA GG+H +A +S  + +GGKV++
Sbjct: 217 VWAWGGNYSGQLGDGTLDSRSTP--VRVSGLTGIVALAGGGSHSVAASS--TTLGGKVWA 272

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG+G  V +L P  V         +  +++G +HS  +     ++  GD   
Sbjct: 273 WGDNTYGQLGNGGDVSSLLPLEVPGL----TQVVALASGTSHSLALRGDDSVWAWGDNAQ 328

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            Q           PV+VS     +   +ACG   SLV   D   N   G+G+   GQLG 
Sbjct: 329 AQTAQTGTSVQRVPVRVSGV--SDAQALACGNAFSLVGRGD---NVTLGWGANGSGQLGN 383

Query: 216 SKDRIRSV--SLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGR------GFNST 266
               +R++   +P +T G          A GD    L  A+G ++ WG       G  + 
Sbjct: 384 GSSSVRALPGRVPSLTAGAS-------LAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTL 436

Query: 267 SDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                P  L S+L+  +A +    H L L  DG V   G + +G L D       RP   
Sbjct: 437 VSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGDNAYGQLGDTS--GGRRPSPA 494

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
            +  V+        +IAAG  HS                            +  +  + T
Sbjct: 495 QVPGVAG-----ATEIAAGTYHSL--------------------------ALRSDGTVWT 523

Query: 386 WGWGEHGQLGLGNT 399
           WG   +GQLG G T
Sbjct: 524 WGDNSYGQLGAGAT 537



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 124/278 (44%), Gaps = 31/278 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WGA   GQLG G      +P    +  L+ V+ +A G  H +AL        G V++
Sbjct: 69  VWAWGANAQGQLGEGSTLQHSTPT--QVVGLTGVTAVAAGNTHSMALREE-----GTVWT 121

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G    ++ P  V    G    +T I+AG  HS     +G ++  G+ T 
Sbjct: 122 WGTNTDGQLGDGVSQRSV-PAQVAGLTG----VTAIAAGNLHS-LALINGAVWAWGNNTT 175

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S S+P KV+      V  IA G  HSL L +D     V+ +G    GQLG 
Sbjct: 176 GQLGDGSSTSRSTPAKVAGLT--EVVAIAAGDFHSLALKRD---GTVWAWGGNYSGQLG- 229

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE---GHLYTWGRG----FNSTSD 268
               + S S P    GL    IV ++  G  S A S+    G ++ WG        +  D
Sbjct: 230 -DGTLDSRSTPVRVSGL--TGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGD 286

Query: 269 VNC--PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
           V+   P  +P        A G +H L L GD  V   G
Sbjct: 287 VSSLLPLEVPGLTQVVALASGTSHSLALRGDDSVWAWG 324



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 163/431 (37%), Gaps = 104/431 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG---- 90
           KVW+WG  T GQLG G     L P  L +  L+ V  LA G +H LAL    SV      
Sbjct: 269 KVWAWGDNTYGQLGNGGDVSSLLP--LEVPGLTQVVALASGTSHSLALRGDDSVWAWGDN 326

Query: 91  ------------------------------GKVFS-----------WGRGSSGQLGHGEM 109
                                         G  FS           WG   SGQLG+G  
Sbjct: 327 AQAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSS 386

Query: 110 -VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
            V AL  +  +   G       ++AG +H       G ++  GD T+GQLG G   S  +
Sbjct: 387 SVRALPGRVPSLTAG-----ASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPA 441

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD--RIRSVSLP 226
           PV++SS +  +V  ++    HSL L  D     V+ +G    GQLG +    R     +P
Sbjct: 442 PVRLSSTLT-SVRALSASSYHSLALRSD---GTVWAWGDNAYGQLGDTSGGRRPSPAQVP 497

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST-SDVNCPQSLPSSL 279
            V           I+A    S AL ++G ++TWG       G  +T      P  +P   
Sbjct: 498 GVAGATE------IAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLA 551

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
             +  A G  H L L   G+V   G + +G L D    S   P      +VS L      
Sbjct: 552 VITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVP-----GRVSGLP----- 601

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
                A   A+V G                 P +   +  + ++ TWG   +GQLG G T
Sbjct: 602 -----AGIQAIVAG-----------------PSYSVALGADGSVWTWGENSNGQLGDGTT 639

Query: 400 CDQIHPKVVNL 410
             +  P  V+L
Sbjct: 640 TARPVPARVSL 650



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 127/292 (43%), Gaps = 36/292 (12%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           LA G  H L +T       G V++WG  + GQLG G  +    P  V    G    +T +
Sbjct: 53  LAAGLNHSLYVTPA-----GTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTG----VTAV 103

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           +AG  HS  + + G ++T G  T GQLG G     S P +V+      V  IA G  HSL
Sbjct: 104 AAGNTHSMALREEGTVWTWGTNTDGQLGDG-VSQRSVPAQVAGLT--GVTAIAAGNLHSL 160

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            L+       V+ +G+   GQLG      RS   P    GL   E+V I+A    S AL 
Sbjct: 161 ALINGA----VWAWGNNTTGQLGDGSSTSRST--PAKVAGL--TEVVAIAAGDFHSLALK 212

Query: 252 AEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD---GEVLM 302
            +G ++ WG  ++      +    + P  +         A G +H +  +     G+V  
Sbjct: 213 RDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWA 272

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            G + +G L +   VSS  PL     +V  L   +V+ +A+G  HS  + G 
Sbjct: 273 WGDNTYGQLGNGGDVSSLLPL-----EVPGL--TQVVALASGTSHSLALRGD 317



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 97/225 (43%), Gaps = 21/225 (9%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WGA   GQLG G       P  + +  L  V  +A G  H LA+ +      G V++
Sbjct: 873  VWAWGANGSGQLGDGTTTSRAVP--MQVKELVDVVAVAGGSGHSLAVRAD-----GTVWA 925

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG   SGQLG G       P  V+   G    +  I++G  HS  +++ G ++  G    
Sbjct: 926  WGANGSGQLGDGTTTSRTLPVFVSTLSG----VQAIASGAQHSLALAEGGVVWAWGANGS 981

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G   S + PV+VS      V  +  G   SL L       +V+ +G+   GQLG 
Sbjct: 982  GQLGDGTTTSRTRPVQVSGL--SGVQGLVAGASFSLALTP----GKVWSWGNNSAGQLGD 1035

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                 RS    Q   G      V +SA    +  L ++    +WG
Sbjct: 1036 GTLNSRS----QPGAGPTLSSFVALSAGAQHTVVLRSDDSFLSWG 1076



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 106/243 (43%), Gaps = 27/243 (11%)

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
            P     G  Y    ++AG NHS +V+ +G ++  G    GQLG G    HS+P +V   
Sbjct: 41  APAISVQGRPY---RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGL 97

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
               V  +A G  HS+ L ++     V+ +G+   GQLG   D +   S+P    GL   
Sbjct: 98  T--GVTAVAAGNTHSMALREE---GTVWTWGTNTDGQLG---DGVSQRSVPAQVAGL--T 147

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN 289
            +  I+A    S AL   G ++ WG       G  S++  + P  +         A G  
Sbjct: 148 GVTAIAAGNLHSLAL-INGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDF 206

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H L L  DG V   GG++ G L D    S + P+     +VS L G  ++ +A G  HS 
Sbjct: 207 HSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPV-----RVSGLTG--IVALAGGGSHSV 259

Query: 350 VVT 352
             +
Sbjct: 260 AAS 262



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 36/324 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
             V+S+G+ + GQLG      + SP+ L  +    +  +A G    LAL+       G V+
Sbjct: 772  SVFSFGSNSRGQLGYEGSATQTSPRWL--TGPECIEAVAAGALFSLALS-----CDGGVW 824

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG   SGQLG G +     P  V         +  I+AG +H+  V   G ++  G   
Sbjct: 825  AWGDNGSGQLGDGAVTARTAPARVPGL----AHVVAIAAGSDHALAVRADGTVWAWGANG 880

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
             GQLG G   S + P++V   V  +V  +A G  HSL +  D     V+ +G+   GQLG
Sbjct: 881  SGQLGDGTTTSRAVPMQVKELV--DVVAVAGGSGHSLAVRAD---GTVWAWGANGSGQLG 935

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                  R  +LP     L  ++   I++    S AL+  G ++ WG       G  +T+ 
Sbjct: 936  DGTTTSR--TLPVFVSTLSGVQA--IASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTS 991

Query: 269  VNCPQSLPSSLSFSQAAL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
               P  + S LS  Q  + G +  L LT  G+V   G +  G L D    S ++P   A 
Sbjct: 992  RTRPVQV-SGLSGVQGLVAGASFSLALT-PGKVWSWGNNSAGQLGDGTLNSRSQP--GAG 1047

Query: 328  EKVSNLDGVKVIQIAAGAEHSAVV 351
              +S+      + ++AGA+H+ V+
Sbjct: 1048 PTLSSF-----VALSAGAQHTVVL 1066


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 162/391 (41%), Gaps = 62/391 (15%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + ++ WG  + GQLG G + +E  L P  +     S V  +ACG  H L LT+      G
Sbjct: 1   MALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTA-----NG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V++ G     QLGH    +    +P+   +   Y +  I+ G  HS  +++ G + + G
Sbjct: 56  QVYACGNNDHHQLGH----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111

Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           D   GQ+GH  D      P  +   V++ V QIACG  HSL L   C   ++Y +GS   
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL-TSC--GELYSWGSNIY 168

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGI-----SANGDRSAALSAEGHLYTWGR---- 261
           GQLGV   +     LP     L    I+GI     +  G+ S  +S    ++ WG+    
Sbjct: 169 GQLGVQSPK----DLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCG 224

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G N   +   P  L S  +L       G  + + LT +G V   G  ++G L      
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASN 284

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P       V  L G  + Q+A G  H+                         + ++
Sbjct: 285 NEMIP-----RMVIELMGSTITQVACGNRHT-------------------------LALV 314

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                + ++G G  GQLG  NT  Q  PKVV
Sbjct: 315 PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG     D   S   L L+++  + +  +ACGG H   ++  S+V G 
Sbjct: 159 ELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFG- 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
               WG+ + GQLG  +  +  YP  +         +  ++ G  +S F+++ G +FTCG
Sbjct: 218 ----WGKNTCGQLGLNDEQNRAYPSQLK--SMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+    G +VY FG G  G
Sbjct: 272 AGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPS--GGRVYSFGLGASG 329

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG +++ I S +LP+V IG
Sbjct: 330 QLG-TRNTI-SQTLPKVVIG 347


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 168/413 (40%), Gaps = 100/413 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    G+LG G   D   PQL+   +  +  ++ACG  H  A+T     + G++++
Sbjct: 301 VFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGDFHTCAVT-----LSGELYT 355

Query: 96  WGRG--SSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           WG    S G +GH   V    PK ++   +G R  I+ I+ G  H+  VS +G LFT GD
Sbjct: 356 WGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVR--ISSIACGAWHTALVSSAGQLFTFGD 413

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           GTFG LGHGD R+ + P +V S       + ACG+ H+  +++                 
Sbjct: 414 GTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVE----------------- 456

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
                                   IVG S     SA   + G L+TWG G          
Sbjct: 457 -----------------------VIVGYS-----SATSCSSGKLFTWGDGDKYRLGHGDK 488

Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                P  + +    +F Q A G +  + LT  G V  +G + +G L +P +     P  
Sbjct: 489 EQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNP-KADGKVPGM 547

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V  E         V +I  GA H A ++ K                            I 
Sbjct: 548 VDGELARTF----VEEIGCGAHHVAALSSKTE--------------------------IY 577

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V        RD Q++ V CGS FT  I  H
Sbjct: 578 TWGKGANGRLGHGDVEDRTAPTLVEA-----LRDKQVKTVACGSSFTAVICLH 625



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 127/334 (38%), Gaps = 79/334 (23%)

Query: 105 GHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
           G G  VD+L PK +      D     ++ I+ G  H+  V+  G +F  G+   G+LGHG
Sbjct: 261 GAGSRVDSLVPKALQAAVVLD-----VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHG 315

Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                S P  V +    N   +ACG  H+  +    L  ++Y +G+  +    V      
Sbjct: 316 IDVDVSEPQLVQALAGVNTELVACGDFHTCAVT---LSGELYTWGADAQSGGLVGHSNPV 372

Query: 222 SVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS 280
           S  +P+ ++  L  + I  I+     +A +S+ G L+T+                     
Sbjct: 373 SHWMPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTF--------------------- 411

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                          GDG   +LG      L+ P+ V S             L G+K ++
Sbjct: 412 ---------------GDGTFGVLGHGDKRNLAIPKEVES-------------LKGLKTVR 443

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
            A G  H+A V          I+ Y+             +  + TWG G+  +LG G+  
Sbjct: 444 AACGIWHTAAVVE-------VIVGYSS-------ATSCSSGKLFTWGDGDKYRLGHGDKE 489

Query: 401 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            ++ P  V    ++  R    +V CG   T A++
Sbjct: 490 QKLVPTCVAALVDYNFR----QVACGHSLTVALT 519


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G      YP  +   D     +  ++ G +HS  ++  G LFT G G
Sbjct: 213 YSWGKNEFGQLGLGHTESKDYPSLIEALDNQE--VEFLACGGSHSALLTQDGLLFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G    R + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 329 GNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386

Query: 274 SLPS 277
           ++P+
Sbjct: 387 TIPT 390



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 129/271 (47%), Gaps = 31/271 (11%)

Query: 53  HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
           +D  S + L   S+     +  + CG  H LAL+      GG++F+WG+   GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                 P+ V    G    +  ISAG  HS  +S SG +++ G   FGQLG G   S   
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDY 233

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
           P  + +  N+ V  +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R   + 
Sbjct: 234 PSLIEALDNQEVEFLACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
           ++ +G    +I          A +S  G ++++G G +       T D   P  LP  +S
Sbjct: 291 EL-VGNRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIP--LPVKVS 345

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            S+      H    T + E++M+ G +  +L
Sbjct: 346 SSEELKLETH----TSEKELIMIAGGNQSIL 372



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 107/242 (44%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL  +L   +    A G 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP-SLIEALDNQEVEFLACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  V
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPV 342

Query: 409 NL 410
            +
Sbjct: 343 KV 344



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 30/130 (23%)

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
           Q   G  H L L+  GE+   G + HG L     V    P +   + V +L GV + QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLG----VGRKFPSTTTPQIVEHLAGVPLAQIS 197

Query: 343 AGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQ 402
           AG  HS  ++                        ++ N  I +WG  E GQLGLG+T  +
Sbjct: 198 AGEAHSMALS------------------------MSGN--IYSWGKNEFGQLGLGHTESK 231

Query: 403 IHPKVVNLGD 412
            +P ++   D
Sbjct: 232 DYPSLIEALD 241


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 144/306 (47%), Gaps = 30/306 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G     ++     L  +S V  +A G  H +AL++      G V +
Sbjct: 520 VWTWGYNAYGQLGNGTTTQVVT--PTQLPGMSGVIDVAAGVNHTVALSAD-----GTVAA 572

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG+G   + L P+ V   DG    +T ISAG  H+  +   G ++  G   +
Sbjct: 573 WGYNAYGQLGNGTTANQLTPQSVPELDG----VTAISAGSTHTVALKADGTVWAWGSNLY 628

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G +   SSPV+V S   +NV  IA G  H++ +  D     ++ +G G +GQLG+
Sbjct: 629 GQLGDGTFTHRSSPVQVPSL--ENVVSIAAGHFHTVAVKGD---GTLWVWGYGPQGQLGL 683

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----- 270
                +SV +    +G      V I+A G  + AL A G ++TW  G+NS+  +      
Sbjct: 684 GTTTNQSVPVQVSGLG----HAVAIAAGGYHTVALLANGQVWTW--GYNSSGQLGDATII 737

Query: 271 ---CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
               P  +P   +    A G     VL  DG V   G + +G L D    S + P +  +
Sbjct: 738 QRYSPVLVPGLTNVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLM 797

Query: 328 EKVSNL 333
             V +L
Sbjct: 798 NSVVDL 803



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 169/409 (41%), Gaps = 60/409 (14%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WSWG    GQLG G   + L P L+  + L+ V  L+ G  H +AL        G  + W
Sbjct: 317 WSWGNNAYGQLGDGTTLNRLRPVLV--AGLTGVRALSGGVVHTVALKWD-----GTAWGW 369

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G  S+GQLG+G   ++  P  V            I AG  H+      G L+  GD  +G
Sbjct: 370 GYNSAGQLGNGTTTNSSIPVQVAALT----QAVEIDAGGYHTLARRQDGTLYAWGDNFYG 425

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV---YGFGSGKRGQL 213
            LG G+  S S PV+V       V     G  +S+   K     QV   + +G    G+L
Sbjct: 426 ALGTGNTTSSSVPVQVPL---SGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGEL 482

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G      R+     V  G+  ++  G SA+   S AL A G ++TWG       G  +T+
Sbjct: 483 GDGTTTQRTSPTAVVVSGI--VKTAGGSAH---SVALGAGGAVWTWGYNAYGQLGNGTTT 537

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            V  P  LP        A G NH + L+ DG V   G + +G L +    +   P     
Sbjct: 538 QVVTPTQLPGMSGVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTP----- 592

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVR---------LFIISYTPFFPPFFIN 375
           + V  LDGV    I+AG+ H+  +      + W            F    +P   P   N
Sbjct: 593 QSVPELDGVTA--ISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLEN 650

Query: 376 VIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLG 411
           V++             +  +  WG+G  GQLGLG T +Q  P +V  LG
Sbjct: 651 VVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG 699



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 155/378 (41%), Gaps = 73/378 (19%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+   GQLG G   + L    + +  +S V  +A  G+  +AL +      G V+
Sbjct: 215 SVWTWGSNAYGQLGDGT--NTLRAVPVQVPGMSDVVAVAAAGSRTVALKAD-----GTVW 267

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  SSG+LG G    +L P  V    G    +T+I+AG  H+  V   G  ++ G+  
Sbjct: 268 TWGINSSGELGDGTTTHSLLPIQVPNLSG----VTNIAAGLWHTLAVKKDGSAWSWGNNA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G   +   PV V+      V  ++ G+ H++ L  D      +G+G    GQLG
Sbjct: 324 YGQLGDGTTLNRLRPVLVAGLTG--VRALSGGVVHTVALKWD---GTAWGWGYNSAGQLG 378

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
                  + S+P     L   + V I A G  + A   +G LY WG  F       +T+ 
Sbjct: 379 --NGTTTNSSIPVQVAAL--TQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTS 434

Query: 269 VNCPQSLP-SSLSFSQAALGW--------NHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
            + P  +P S + +  A   +        N   V T    +   G + +G L D      
Sbjct: 435 SSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHT----LFAWGHNTNGELGDGTTTQR 490

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
           T P +V +  +        ++ A G+ HS                            +  
Sbjct: 491 TSPTAVVVSGI--------VKTAGGSAHSVA--------------------------LGA 516

Query: 380 NRAIMTWGWGEHGQLGLG 397
             A+ TWG+  +GQLG G
Sbjct: 517 GGAVWTWGYNAYGQLGNG 534



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 158/398 (39%), Gaps = 62/398 (15%)

Query: 21  KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVL 80
            P +    E +    +W+WG    GQLG G+     +P    +  L+ V   + G  H +
Sbjct: 151 SPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPT--RVRGLNQVVSASAGAEHSV 208

Query: 81  ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
           A+T       G V++WG  + GQLG G   + L   PV    G    +   +AG      
Sbjct: 209 AVTED-----GSVWTWGSNAYGQLGDG--TNTLRAVPVQ-VPGMSDVVAVAAAGSRTVAL 260

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            +D G ++T G  + G+LG G       P++V +     V  IA G+ H+L + KD    
Sbjct: 261 KAD-GTVWTWGINSSGELGDGTTTHSLLPIQVPNL--SGVTNIAAGLWHTLAVKKD---G 314

Query: 201 QVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
             + +G+   GQL  G + +R+R    P +  GL  +    +S     + AL  +G    
Sbjct: 315 SAWSWGNNAYGQLGDGTTLNRLR----PVLVAGLTGVRA--LSGGVVHTVALKWDGT--A 366

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHGM 310
           WG G+NS   +    +  SS+    AAL        G  H L    DG +   G + +G 
Sbjct: 367 WGWGYNSAGQLGNGTTTNSSIPVQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGA 426

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L      SS+ P+ V L  V            AG  +S     K +              
Sbjct: 427 LGTGNTTSSSVPVQVPLSGVR--------WFGAGYYYSVAERKKVN-------------- 464

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                 +A+   +  WG   +G+LG G T  +  P  V
Sbjct: 465 ------MAQVHTLFAWGHNTNGELGDGTTTQRTSPTAV 496



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 32/303 (10%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           +S G  H+  V   G L+  G+   GQLG+G     ++P +V       V   + G  HS
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL--NQVVSASAGAEHS 207

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           + + +D     V+ +GS   GQLG   + +R+V  P    G+ D  +V ++A G R+ AL
Sbjct: 208 VAVTED---GSVWTWGSNAYGQLGDGTNTLRAV--PVQVPGMSD--VVAVAAAGSRTVAL 260

Query: 251 SAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            A+G ++TWG       G  +T+    P  +P+    +  A G  H L +  DG     G
Sbjct: 261 KADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGSAWSWG 320

Query: 305 GSHHGMLSDPERVSSTRPLSVA-LEKVSNLDGVKVIQIA--------------AGAEHSA 349
            + +G L D   ++  RP+ VA L  V  L G  V  +A              AG   + 
Sbjct: 321 NNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNG 380

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE--HGQLGLGNTCDQIHPKV 407
             T     V++  ++          + +A  +    + WG+  +G LG GNT     P  
Sbjct: 381 TTTNSSIPVQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQ 440

Query: 408 VNL 410
           V L
Sbjct: 441 VPL 443



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 12/141 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VW+WG  + GQLG   +    SP L  +  L++V  LA GG     L        G V+
Sbjct: 719 QVWTWGYNSSGQLGDATIIQRYSPVL--VPGLTNVIALAAGGYTTAVLKRD-----GTVW 771

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G   +GQLG G       P   T  +    ++  +S+G NH   +     +  CG  +
Sbjct: 772 AFGYNPNGQLGDGTTTSRSSPT-ATLMN----SVVDLSSGVNHMMGLRKDAWVRACGYNS 826

Query: 155 FGQLGHGDYRSHSSPVKVSSF 175
            GQLG G      +PV+V++ 
Sbjct: 827 AGQLGDGTTTQRPTPVQVTNL 847


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 162/384 (42%), Gaps = 58/384 (15%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +  +   V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +++ G   DG
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G LG  +Y     P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQL
Sbjct: 115 QLGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQL 169

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+  D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +
Sbjct: 170 GLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228

Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D   P  L S  S        G +H   LT +G V   G   +G L          P   
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP--- 285

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              KV  L G  V Q+A G +H++                  F P         +  I +
Sbjct: 286 --RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYS 318

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVN 409
           +G G +GQLG G+T ++  P  V 
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYSWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEEYIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V+S
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYS 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 162/384 (42%), Gaps = 58/384 (15%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +  +   V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +++ G   DG
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G LG  +Y     P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQL
Sbjct: 115 QLGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQL 169

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+  D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +
Sbjct: 170 GLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228

Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D   P  L S  S        G +H   LT +G V   G   +G L          P   
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP--- 285

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              KV  L G  V Q+A G +H++                  F P         +  I +
Sbjct: 286 --RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYS 318

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVN 409
           +G G +GQLG G+T ++  P  V 
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYSWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEEYIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V+S
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYS 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 162/384 (42%), Gaps = 58/384 (15%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +  +   V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +++ G   DG
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G LG  +Y     P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQL
Sbjct: 115 QLGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQL 169

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+  D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +
Sbjct: 170 GLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228

Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D   P  L S  S        G +H   LT +G V   G   +G L          P   
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP--- 285

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              KV  L G  V Q+A G +H++                  F P         +  I +
Sbjct: 286 --RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYS 318

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVN 409
           +G G +GQLG G+T ++  P  V 
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYSWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEEYIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V+S
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYS 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 166/404 (41%), Gaps = 60/404 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G   D   P  + +  L  V  ++ G  H LAL        G V+ 
Sbjct: 63  VWAWGYNGFGQLGNGTYKDSCIP--VRVKGLKDVVAVSAGTFHSLALKKD-----GSVWI 115

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQ       D   P  V         I  I+AGW+ S  V   G ++  G    
Sbjct: 116 WGHTNYGQRKSDVYRDFTTPVKVKELK----NIVAIAAGWDFSLAVGSDGSVWAWGINNH 171

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G  +  + PVKV     K+V  ++ G+ HSL L +D     V+ +G  + G+LG 
Sbjct: 172 GELGIGSLKPSAVPVKVKGL--KDVVAVSAGLYHSLALKRD---GTVWSWGYNEDGELGN 226

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
                 +VS+P    GL D  ++ ISA G  S AL+ +G ++ WG G    +       +
Sbjct: 227 RPTEDYTVSVPVRVKGLSD--VIAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYI 284

Query: 276 PSSLSFSQA----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
           P  + +       A G+ H + L  DG V + G + +G+L      S+    S  L +V 
Sbjct: 285 PVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLG-----SNVGEHSFLLVQVK 339

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L    V+ +AAG  HS  +T                          +N  I  WG    
Sbjct: 340 GLK--NVVAVAAGRLHSVALT--------------------------KNGTIWAWGNNAF 371

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           GQLG  N    +     NL  + +  D  + +  G   T AI R
Sbjct: 372 GQLGRENNSFSL-----NLPYKVKWLDNVVAIATGGSHTLAIKR 410



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 37/325 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG   DG+LG     D      + +  LS V  ++ GG H +AL        G V+ 
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKD-----GAVWI 267

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G   +  +G++ ++  P  + + +     +  I+AG+ HS  + D G ++  G  ++
Sbjct: 268 WGGGIIEK--NGKIDNSYIPVRIRWLN----KVVAIAAGYRHSIALKDDGTVWVWGHNSY 321

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LG          V+V     KNV  +A G  HS+ L K+     ++ +G+   GQLG 
Sbjct: 322 GVLGSNVGEHSFLLVQVKGL--KNVVAVAAGRLHSVALTKN---GTIWAWGNNAFGQLGR 376

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------FNST 266
             +   S++LP     L +  +V I+  G  + A+  +G +++WG           + S+
Sbjct: 377 ENNSF-SLNLPYKVKWLDN--VVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSS 433

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C + L +++     +    H L +  DG V +  G    + S+        PL + 
Sbjct: 434 YIPTCVKGLNNAVLVEAGS---QHSLAVDKDGTVWVW-GFIESVWSEKNTKDILSPLPIK 489

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVV 351
           + K+++     + +IA G ++  V+
Sbjct: 490 IGKLND-----ITEIAGGLDYILVL 509



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 133/329 (40%), Gaps = 46/329 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWGA   GQLG G       P  +    L++  ++  G  H LA+        G V+ 
Sbjct: 414 VWSWGANNKGQLGNGTYKSSYIPTCV--KGLNNAVLVEAGSQHSLAVDKD-----GTVWV 466

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG-DGT 154
           WG   S         D L P P+    G    IT I+ G ++   +   G ++ CG D  
Sbjct: 467 WGFIES-VWSEKNTKDILSPLPIKI--GKLNDITEIAGGLDYILVLRKDGNIWGCGNDFY 523

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS----GKR 210
           F +       S +  +++ +   KNV  IA G  HSL +  D     V+ +G      K+
Sbjct: 524 FRKFTDSSVSSVTKLIRLDNI--KNVRSIAAGYFHSLAVRTD---GTVWSWGDTNLDNKK 578

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RG 262
             L  S+  ++   L  V         V ++A    S AL  +G +++WG         G
Sbjct: 579 KYLNFSEKPVKIKGLSGV---------VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNG 629

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
              TS V  P  +    +    A G  H + L  DG V + G +  G L       ST P
Sbjct: 630 TRETSFV--PVRVKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVP 687

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           L V  EK+ N     V+ IAAG  HS  +
Sbjct: 688 LKV--EKLDN-----VVAIAAGDTHSVAL 709



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 27/228 (11%)

Query: 59  QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
           +L+ L ++ +V  +A G  H LA+ +      G V+SWG      L + +       KPV
Sbjct: 537 KLIRLDNIKNVRSIAAGYFHSLAVRTD-----GTVWSWG---DTNLDNKKKYLNFSEKPV 588

Query: 119 TF--FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
                 G    +  ++AG  HS  +   G +++ G   +GQLG+G   +   PV+V    
Sbjct: 589 KIKGLSG----VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL- 643

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
             NV  IA G  HS+ L KD     V+ +GS  RGQLG      R++    V + +  ++
Sbjct: 644 -NNVVAIAAGDYHSMALKKD---GTVWVWGSNIRGQLGR-----RNIEFSTVPLKVEKLD 694

Query: 237 -IVGISANGDRSAALSAEGHLYTWGRGFNS--TSDVNCPQSLPSSLSF 281
            +V I+A    S AL  +G ++ WG   +   + ++    S+P  + F
Sbjct: 695 NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSSSSIPVQIKF 742



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 20/234 (8%)

Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
             G  + +    AG  H+  + D G ++  G   FGQLG+G Y+    PV+V     K+V
Sbjct: 37  LQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGL--KDV 94

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
             ++ G  HSL L KD     V+ +G    GQ     D  R  + P     L +  IV I
Sbjct: 95  VAVSAGTFHSLALKKD---GSVWIWGHTNYGQR--KSDVYRDFTTPVKVKELKN--IVAI 147

Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
           +A  D S A+ ++G ++ WG       G  S      P  +         + G  H L L
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLAL 207

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             DG V   G +  G L +      T  + V ++ +S+     VI I+AG  HS
Sbjct: 208 KRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-----VIAISAGGFHS 256



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 11/137 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG    GQLG G       P  + +  L++V  +A G  H +AL        G V+ 
Sbjct: 615 VWSWGYNAYGQLGNGTRETSFVP--VRVKGLNNVVAIAAGDYHSMALKKD-----GTVWV 667

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG   +  +  P  V   D     +  I+AG  HS  +   G ++  G    
Sbjct: 668 WGSNIRGQLGRRNIEFSTVPLKVEKLD----NVVAIAAGDTHSVALKKDGTVWVWGIECD 723

Query: 156 GQLGHGDYRSHSSPVKV 172
             L      S S PV++
Sbjct: 724 RDLSKEILSSSSIPVQI 740


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 182/407 (44%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H   +T       G+++SWG  S G+LGHG   D  
Sbjct: 336 DCLVPKPLEFAVRLDVQNISCGGRHAALVTK-----QGEIYSWGEESGGRLGHGVDCDVS 390

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P  
Sbjct: 391 QPKLIDALS--HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKH 448

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  +   +V  I+CG  H+ V+       Q++ FG G  G LG   DR  S+S+P+   
Sbjct: 449 VNGPLEGIHVSSISCGPWHTAVVTS---AGQLFTFGDGSFGVLG-HGDR-ESISVPREVE 503

Query: 231 GL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQSL 275
            L             H   +V + A G+ S++  + G ++TWG G           P+ +
Sbjct: 504 SLKGLRTVRAACGVWHTAAVVEVMA-GNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLV 562

Query: 276 PSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           P+ ++      F Q A G    + LT  G V  +G + +G L + +      P+ V  + 
Sbjct: 563 PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQ-ADGMLPVRVEGKL 621

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
             N     V +I+ GA H AV+T K                            + TWG G
Sbjct: 622 HKNF----VEEISCGAYHVAVLTSKTE--------------------------VYTWGKG 651

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G+T D+  P +V   +  +++  ++ V CG  FT AI  H
Sbjct: 652 ANGRLGHGDTDDKNTPTLV---EALKDKQVRI-VVCGINFTAAICIH 694



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  S  ++ ++ACG  H  A+T     + G ++
Sbjct: 369 EIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVT-----LSGDLY 423

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  +    PK V    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 424 TWGDGTFKFGLLGHGNDISHWVPKHVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 481

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD  S S P +V S       + ACG+ H+  +++   GN         ++
Sbjct: 482 DGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKI 541

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG      + V  P     L +     ++     + AL+  GH+YT G  
Sbjct: 542 FTWGDGDKGRLGHGDKGPKLV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSA 599

Query: 263 F-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                 N+ +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 600 VYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRL 656



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G    +L P  +      +   +ACG    +ALT+      G V+
Sbjct: 540 KIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 594

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 595 TMGSAVYGQLGNAQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGK 650

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG----SG 208
           G  G+LGHGD    ++P  V +  +K V  + CG+  +  +   C+   V G      SG
Sbjct: 651 GANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAI---CIHKWVSGVDQSMCSG 707

Query: 209 KRGQLGVSKDR 219
            R    + + R
Sbjct: 708 CRQPFNLRRKR 718


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  112 bits (279), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 88/329 (26%), Positives = 142/329 (43%), Gaps = 58/329 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLL----NLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           V+SWG G  G LG G  +  ++P ++    N     ++  +ACG  HVL+L        G
Sbjct: 273 VYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQ-----G 327

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            V+SWG G  G+LGHG+      PK +      +Y I  I AG   S  +S    LF  G
Sbjct: 328 IVYSWGNGQGGRLGHGDETGENIPKEIIGL--RQYKILMIEAGEGSSAAISIKNELFIWG 385

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G  G+LG G   +   PV +    ++ V  IA G  HSL +L++    +   +GS K G
Sbjct: 386 VGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRN---GKAMCWGSSKDG 442

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           +LG+     R+ + P+  + L   ++  I+A    S AL+  G +Y++G       G++ 
Sbjct: 443 KLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDE 502

Query: 266 TS-DVNCPQSLPSSLSFS-------------------------------------QAALG 287
              +V  P+ + +   F+                                     QA  G
Sbjct: 503 IKGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCG 562

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           +N  + L  DG++ + G + +G L   +R
Sbjct: 563 FNSTVFLLNDGQMYVCGSNKYGQLGFSKR 591



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 85/288 (29%), Positives = 131/288 (45%), Gaps = 37/288 (12%)

Query: 91  GKVFSWGRGSSGQLGHG----------EMVDALYP-KP-VTFFDGHRYTITHISAGWNHS 138
           G VF+WG  + G+LG            +  + L P KP +  FD     I  +S G + +
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDA-SIIIIKVSCGNSFT 264

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN----KNVHQIACGMRHSLVLL 194
             +S  G +++ G G  G LG G+     +P  +    N    +N+  IACG  H L L 
Sbjct: 265 LALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLD 324

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
              +   VY +G+G+ G+LG   +     ++P+  IGL   +I+ I A    SAA+S + 
Sbjct: 325 HQGI---VYSWGNGQGGRLGHGDET--GENIPKEIIGLRQYKILMIEAGEGSSAAISIKN 379

Query: 255 HLYTWGRGFN------STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
            L+ WG G +       T++V  P  L           ALG NH L +  +G+ +  G S
Sbjct: 380 ELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSS 439

Query: 307 HHGMLSDPERVSS--TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             G L     +    T+P     +++  LD  K+ QIAAG  HS  +T
Sbjct: 440 KDGKLGLETALDRNFTQP-----KELVTLDKEKLYQIAAGPFHSIALT 482



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 57/249 (22%)

Query: 5   LMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLS 64
           LM E  +G SA I+     I+ E        ++ WG G  G+LGTG+  + L P +L   
Sbjct: 363 LMIEAGEGSSAAIS-----IKNE--------LFIWGVGLHGRLGTGKTANVLKPVMLEDL 409

Query: 65  SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
               V  +A G  H L +        GK   WG    G+LG    +D  + +P       
Sbjct: 410 KDQKVEDIALGSNHSLCILR-----NGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLD 464

Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSS---FVNKN- 179
           +  +  I+AG  HS  ++++G +++ G+   G+LG+ + + +   P K+++   F  K  
Sbjct: 465 KEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTG 524

Query: 180 -------------------------------VHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
                                          V Q  CG   ++ LL D    Q+Y  GS 
Sbjct: 525 LNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLND---GQMYVCGSN 581

Query: 209 KRGQLGVSK 217
           K GQLG SK
Sbjct: 582 KYGQLGFSK 590



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 60/328 (18%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           +  ++ G  HVLA+T       G  F WGR  +GQLG G   D +  KP          I
Sbjct: 677 IKHVSTGYFHVLAVTHE-----GATFGWGRNDNGQLGMGRK-DTVVSKPTRIKSLQDKVI 730

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG--------------------DYRSH-- 166
              ++G +HS F+SD G +   G   FG+LG G                    +Y+    
Sbjct: 731 IMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLI 790

Query: 167 SSPVKVSSFVNKNVHQ---IACGMRHSLVLL---KDCLGNQVYGFGSGKRGQLGVSKDRI 220
            + ++++  + K +     IA G  HS+ +    +     +++ +G G  GQ G      
Sbjct: 791 ETKIELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTG--HGSW 848

Query: 221 RSVSLPQVTI--GLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNCPQS 274
           ++  LPQ+     L D + +  S     + AL   GH++ +G     G    +D    Q 
Sbjct: 849 QNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKPSVGIEDFNDEK--QF 906

Query: 275 LPSSLS--------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +P+ L         F   + G  H L +T  G V   G + +       +++S+    + 
Sbjct: 907 MPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTN------TKINSSHKEYLY 960

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            ++V N +  K +  A GA HS ++  K
Sbjct: 961 FDQVENEE--KAVLTACGANHSVLIDTK 986



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 91/235 (38%), Gaps = 56/235 (23%)

Query: 195 KDCLGNQVYGFGSGKRGQLGVS--KDRIRSVSL---------PQVTIGLHDIEIVGISAN 243
           + C    V+ +G    G+LG++  +  I ++           P +      I I+ +S  
Sbjct: 201 RRCGNGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCG 260

Query: 244 GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL---PSSLSFSQ----------AALGWNH 290
              + ALS EGH+Y+WG G NS       Q++   P+ + + +           A G NH
Sbjct: 261 NSFTLALSQEGHVYSWGLG-NSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNH 319

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
           VL L   G V   G    G L   +      P     +++  L   K++ I AG   SA 
Sbjct: 320 VLSLDHQGIVYSWGNGQGGRLGHGDETGENIP-----KEIIGLRQYKILMIEAGEGSSAA 374

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
           ++ K     LFI                       WG G HG+LG G T + + P
Sbjct: 375 ISIK---NELFI-----------------------WGVGLHGRLGTGKTANVLKP 403



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 94/240 (39%), Gaps = 48/240 (20%)

Query: 108 EMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS- 165
           ++ D   P P+T + D  +  I H+S G+ H   V+  G  F  G    GQLG G   + 
Sbjct: 656 QLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTV 715

Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV---------- 215
            S P ++ S  +K +   A G  HSL L    LG +V   G  + G+LG+          
Sbjct: 716 VSKPTRIKSLQDKVIIMTASGESHSLFLSD--LG-EVLCSGFNEFGELGIGLNSTSGGAD 772

Query: 216 ---SKDRIRSVSL------------PQVTIGLHDIEIVGISANGDRSAALSAEGH----- 255
              + D I   +             P++  GL  I    I+A  + S A+          
Sbjct: 773 KKENPDEIYDENYQRQLIETKIELTPKIIKGLESIGF--IAAGKNHSIAIRTYKRKEKAM 830

Query: 256 -LYTWGRGFNSTSDVNCPQS--LPS--------SLSFSQAALGWNHVLVLTGDGEVLMLG 304
            L+TWG G++  +     Q+  LP            F QA+ G  H + L   G +   G
Sbjct: 831 KLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG 890



 Score = 49.3 bits (116), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 23/220 (10%)

Query: 19   NAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGG 76
            N    I   + +++ +K+++WG G  GQ G G   ++  PQ++ +  L     +  +CG 
Sbjct: 815  NHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGS 874

Query: 77   AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAG 134
             H +AL +   +       W  G    +G  +  D     P  +      +     IS+G
Sbjct: 875  KHTIALDTTGHI-------WFFGYKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSG 927

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI-ACGMRHSLVL 193
              H+  V+ SG ++  G  T  ++      SH   +      N+    + ACG  HS+++
Sbjct: 928  EEHNLAVTQSGLVYGFGKNTNTKIN----SSHKEYLYFDQVENEEKAVLTACGANHSVLI 983

Query: 194  LKDCLG-NQVYGFGSGKRGQLGVSKDRIR----SVSLPQV 228
              D  G    +GF    R  L + KD  +    S+S P V
Sbjct: 984  --DTKGVPYTWGFVGNGRCGLKLEKDDAQQEQESLSAPTV 1021


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 143/321 (44%), Gaps = 34/321 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG    GQLG         P  +   SL  V  +A G  H LAL        G V+S
Sbjct: 318 IWAWGDNEWGQLGNSISEKLCVP--VQFKSLKDVVAIAAGCEHSLALKKD-----GTVWS 370

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG+G  +D+  P  V         +  I+ G  HS  +   G ++  G+  F
Sbjct: 371 WGNNYYGQLGNGNSIDSYVPVQVRGLK----DVVAIATGNAHSLALKKDGTVWAWGNNEF 426

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G  +S   PV+V     K+V  IA G  HSL   KD     V+ +G+ + GQLG 
Sbjct: 427 GQLGNGTNKSSFVPVQVKGL--KDVVAIAAGSDHSLAFKKD---GTVWAWGNNEFGQLGN 481

Query: 216 -SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDV 269
            S    +  ++P    GL D  +V ++A    S AL  +G ++ WG  +     N     
Sbjct: 482 GSGGYGQYYAVPVQVKGLKD--VVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIERS 539

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALE 328
             P  +         A G NH LVL  DG V   G     +L++  R V S+ P+ +   
Sbjct: 540 FVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQI--- 596

Query: 329 KVSNLDGVK-VIQIAAGAEHS 348
                 G+K V+ IAAG  HS
Sbjct: 597 -----KGLKDVVAIAAGEHHS 612



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 139/320 (43%), Gaps = 33/320 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG     Q+  G   D   P    +  L  V  +A G  + LAL    +V    ++ 
Sbjct: 166 VWCWGLNESIQVIDGSNKDFSVP--FQIKGLKDVVAIAAGKDYSLALKKDGTVW---MWE 220

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +      QL  G   D   P PV   +G +  +  I+AG  HS  +   G ++  G+  +
Sbjct: 221 YKYNYYEQLRRG--ADEYSPVPVQV-EGLK-DVVAIAAGRYHSLALKKDGTVWAWGNNYY 276

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G       PV+V +   K+V  IA G  HSL L KD     ++ +G  + GQLG 
Sbjct: 277 GQLGNGKSEDSYDPVQVKNL--KDVVAIAAGENHSLALKKD---GTIWAWGDNEWGQLGN 331

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDV 269
           S      + +P     L D  +V I+A  + S AL  +G +++WG  +       ++ D 
Sbjct: 332 SIS--EKLCVPVQFKSLKD--VVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDS 387

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P  +         A G  H L L  DG V   G +  G L +    SS  P+ V    
Sbjct: 388 YVPVQVRGLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQV---- 443

Query: 330 VSNLDGVK-VIQIAAGAEHS 348
                G+K V+ IAAG++HS
Sbjct: 444 ----KGLKDVVAIAAGSDHS 459



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 157/379 (41%), Gaps = 65/379 (17%)

Query: 63  LSSL-SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
           LS L +++  +A G  H LAL        G V++WG    GQ G  E   ++ P  V   
Sbjct: 41  LSKLENNIIQIAAGNYHSLALKGD-----GTVWAWGWNHWGQCGTEE--SSIIPVKVKGL 93

Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNV 180
                 +  I+AG  HS  +   G ++  G    GQLG+ D   +S  PV+V     K+V
Sbjct: 94  K----DVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGL--KDV 147

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIV 238
             IA G  +SL L KD     V+ +G  +  Q+  G +KD     S+P    GL D  +V
Sbjct: 148 VAIAAGDGYSLGLKKD---GTVWCWGLNESIQVIDGSNKD----FSVPFQIKGLKD--VV 198

Query: 239 GISANGDRSAALSAEGHLYTWGRGFNSTSDVN--------CPQSLPSSLSFSQAALGWNH 290
            I+A  D S AL  +G ++ W   +N    +          P  +         A G  H
Sbjct: 199 AIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAIAAGRYH 258

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            L L  DG V   G +++G L + +   S  P+     +V NL    V+ IAAG  HS  
Sbjct: 259 SLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPV-----QVKNLK--DVVAIAAGENHSLA 311

Query: 351 VT--------GKFHWVRL-FIISYTPFFPPFFINV-------------IAENRAIMTWGW 388
           +         G   W +L   IS     P  F ++             +A  +    W W
Sbjct: 312 LKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSW 371

Query: 389 GE--HGQLGLGNTCDQIHP 405
           G   +GQLG GN+ D   P
Sbjct: 372 GNNYYGQLGNGNSIDSYVP 390



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 24/229 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG+   G LG   +     P  + +  L  V  +A G  H L L        G V++
Sbjct: 521 IWAWGSNYHGLLGN-DIERSFVP--VQVKGLKDVVAIAAGSNHSLVLKKD-----GTVWA 572

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG      L     +  +Y        G +  +  I+AG +HS  +   G ++  GD  F
Sbjct: 573 WGEVWFDLLNENSRL--VYSSVPVQIKGLK-DVVAIAAGEHHSLGLKKDGTVWAWGDNFF 629

Query: 156 GQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG+     +S  PV+V     K++  IA G  HSL + KD     V+ +G    GQLG
Sbjct: 630 GQLGNSPREKYSLVPVQVKGL--KDILAIATGEWHSLAIKKD---GTVWAWGENSTGQLG 684

Query: 215 ---VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                KD+   V  P    G+ D  ++ ISA    S AL  +G ++ WG
Sbjct: 685 NETSGKDKYSYV--PVQVKGIKD--VLAISAGSYHSLALKKDGTVWGWG 729



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 61  LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD-ALYPKPVT 119
           + +  L  V  +A G  H L L        G V++WG    GQLG+      +L P  V 
Sbjct: 594 VQIKGLKDVVAIAAGEHHSLGLKKD-----GTVWAWGDNFFGQLGNSPREKYSLVPVQVK 648

Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH---GDYRSHSSPVKVSSFV 176
                   I  I+ G  HS  +   G ++  G+ + GQLG+   G  +    PV+V    
Sbjct: 649 GLK----DILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGI- 703

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
            K+V  I+ G  HSL L KD     V+G+G+  RGQLG     + S    QV I
Sbjct: 704 -KDVLAISAGSYHSLALKKD---GTVWGWGANARGQLGNGGAGVYSTVPVQVII 753



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 10/139 (7%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW+WG    GQLG   R    L P  + +  L  +  +A G  H LA+        G V+
Sbjct: 621 VWAWGDNFFGQLGNSPREKYSLVP--VQVKGLKDILAIATGEWHSLAIKKD-----GTVW 673

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S+GQLG+       Y        G +  +  ISAG  HS  +   G ++  G   
Sbjct: 674 AWGENSTGQLGNETSGKDKYSYVPVQVKGIK-DVLAISAGSYHSLALKKDGTVWGWGANA 732

Query: 155 FGQLGHGDYRSHSS-PVKV 172
            GQLG+G    +S+ PV+V
Sbjct: 733 RGQLGNGGAGVYSTVPVQV 751



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 100/293 (34%), Gaps = 90/293 (30%)

Query: 174 SFVNKNVHQIACGMRHSLVL-------------------------------LKDCLG--- 199
           S +  N+ QIA G  HSL L                               LKD +    
Sbjct: 42  SKLENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESSIIPVKVKGLKDVVAIAA 101

Query: 200 -----------NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
                        V+ +GS K GQLG ++D      +P    GL D  +V I+A    S 
Sbjct: 102 GRYHSLTLKKDGTVWAWGSNKDGQLG-NRDAGEYSIVPVQVKGLKD--VVAIAAGDGYSL 158

Query: 249 ALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
            L  +G ++ WG   +      S  D + P  +         A G ++ L L  DG V M
Sbjct: 159 GLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKDVVAIAAGKDYSLALKKDGTVWM 218

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
               ++             P+ V +E + +     V+ IAAG  HS              
Sbjct: 219 WEYKYNYYEQLRRGADEYSPVPVQVEGLKD-----VVAIAAGRYHS-------------- 259

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGE--HGQLGLGNTCDQIHP-KVVNLGD 412
                         +A  +    W WG   +GQLG G + D   P +V NL D
Sbjct: 260 --------------LALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKD 298


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 12/180 (6%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++WGA + GQ G G R + E +PQ L+      ++++ACG  H  AL+       G VF
Sbjct: 162 LYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQ-----SGAVF 216

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG+ S GQLG  +     YP  +      +  + HIS G + + F++  G +FTCG G 
Sbjct: 217 GWGKNSHGQLGLQDRESRCYPTHLKTLRNVK--VCHISCGEDFTAFLTLDGGVFTCGAGE 274

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQ GHG+ +    P KV   +   V Q+ACG RH L      +G ++   G G RGQLG
Sbjct: 275 YGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHMLCR----VGERILACGYGARGQLG 330



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 129/291 (44%), Gaps = 45/291 (15%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACG 186
           I  ISAG  H+ ++S++G L+TCG    GQLG     +  +SPV V +F    +  IACG
Sbjct: 37  IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACG 96

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
           ++HS+ L  D  G Q + +GS   GQLG S     +   P++   L    ++ ++     
Sbjct: 97  LQHSMAL--DEWG-QPFSWGSDSMGQLG-SNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152

Query: 247 SAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSSLSFSQA--ALGWNHVLVLTGD 297
           +  L+  G LY WG          N ++    PQ+L S L    A  A G NH   L+  
Sbjct: 153 TVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQS 212

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           G V   G + HG L   +R S   P       +  L  VKV  I+ G + +A +T     
Sbjct: 213 GAVFGWGKNSHGQLGLQDRESRCYP-----THLKTLRNVKVCHISCGEDFTAFLTL---- 263

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                 +  + T G GE+GQ G GNT D++ P+ V
Sbjct: 264 ----------------------DGGVFTCGAGEYGQTGHGNTKDELVPRKV 292



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 136/333 (40%), Gaps = 31/333 (9%)

Query: 36  VWSWGAGTDGQLGT---GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++ WG  T  +L     G L   + P L      S +  ++ G  H L L++      G 
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSN-----NGH 55

Query: 93  VFSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +++ G    GQLG      D   P  V  F G   T++ I+ G  HS  + + G  F+ G
Sbjct: 56  LYTCGSNEVGQLGRQTNSADGTSPVLVDTFKG--CTLSTIACGLQHSMALDEWGQPFSWG 113

Query: 152 DGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
             + GQLG  +  SH+   P  + +   KNV Q+ACG  H++VL  +     +Y +G+  
Sbjct: 114 SDSMGQLG-SNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNN---GDLYAWGANS 169

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQ G+  +R    + PQ    +  I I  I+   + + ALS  G ++ WG+      G 
Sbjct: 170 YGQCGLG-NRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGL 228

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
                   P  L +  ++     + G +    LT DG V   G   +G            
Sbjct: 229 QDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELV 288

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           P      KV  L G  V Q+A G  H     G+
Sbjct: 289 P-----RKVMELMGSTVTQVACGRRHMLCRVGE 316



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ GAG  GQ G G   DEL P+ +     S+V+ +ACG  H+L        +G ++ +
Sbjct: 267 VFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHMLCR------VGERILA 320

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTF 120
            G G+ GQLG   M  AL P PVTF
Sbjct: 321 CGYGARGQLGCPHMAFALVPTPVTF 345


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G      YP  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 213 YSWGKNEFGQLGLGHTESKDYPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G    R + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386

Query: 274 SLPS 277
           ++P+
Sbjct: 387 TIPT 390



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 28/259 (10%)

Query: 62  NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTF 120
           N+     +  + CG  H LAL+      GG++F+WG+   GQLG G +      P+ V  
Sbjct: 133 NVLQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH 187

Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
             G    +  ISAG  HS  +S SG +++ G   FGQLG G   S   P  +    N+ V
Sbjct: 188 LAG--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKV 245

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIV 238
             +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R   + ++ +G    +I 
Sbjct: 246 EFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGYRVTQIA 301

Query: 239 GISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVL 292
                    A +S  G ++++G G +       T D   P  LP  +S S+     +H  
Sbjct: 302 --CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVSSSEELKLESH-- 355

Query: 293 VLTGDGEVLMLGGSHHGML 311
             T + E++M+ G +  +L
Sbjct: 356 --TSEKELIMIAGGNQSIL 372



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL   L   +    A G 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP-SLIEGLDNQKVEFVACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  V
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342

Query: 409 NL 410
            +
Sbjct: 343 KV 344


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 168/413 (40%), Gaps = 100/413 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    G+LG G   D   PQL+   +  +  ++ACG  H  A+T     + G++++
Sbjct: 310 VFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACGDFHTCAVT-----LSGELYT 364

Query: 96  WGRG--SSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           WG    S G +GH   V    PK ++   +G R  I+ I+ G  H+  VS +G LFT GD
Sbjct: 365 WGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVR--ISSIACGAWHTALVSSAGQLFTFGD 422

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           GTFG LGHGD R+ + P +V S       + ACG+ H+  +++                 
Sbjct: 423 GTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVE----------------- 465

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
                                   IVG S     SA   + G L+TWG G          
Sbjct: 466 -----------------------VIVGYS-----SATSCSSGKLFTWGDGDKYRLGHGDK 497

Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                P  + +    +F Q A G +  + LT  G V  +G + +G L +P +     P  
Sbjct: 498 EQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNP-KADGKVPGM 556

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           V  E         V +I  GA H A ++ K                            I 
Sbjct: 557 VDGELARTF----VEEIGCGAHHVAALSSKTE--------------------------IY 586

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           TWG G +G+LG G+  D+  P +V        RD Q++ V CGS FT  I  H
Sbjct: 587 TWGKGANGRLGHGDVEDRTAPTLVEA-----LRDKQVKTVACGSSFTAVICLH 634



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 127/334 (38%), Gaps = 79/334 (23%)

Query: 105 GHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
           G G  VD+L PK +      D     ++ I+ G  H+  V+  G +F  G+   G+LGHG
Sbjct: 270 GAGSRVDSLVPKALQAAVVLD-----VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHG 324

Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                S P  V +    N   +ACG  H+  +    L  ++Y +G+  +    V      
Sbjct: 325 IDVDVSEPQLVQALAGVNAELVACGDFHTCAVT---LSGELYTWGADAQSGGLVGHSNPV 381

Query: 222 SVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS 280
           S  +P+ ++  L  + I  I+     +A +S+ G L+T+                     
Sbjct: 382 SHWMPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTF--------------------- 420

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
                          GDG   +LG      L+ P+ V S             L G+K ++
Sbjct: 421 ---------------GDGTFGVLGHGDKRNLAIPKEVES-------------LKGLKTVR 452

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
            A G  H+A V          I+ Y+             +  + TWG G+  +LG G+  
Sbjct: 453 AACGIWHTAAVVE-------VIVGYSS-------ATSCSSGKLFTWGDGDKYRLGHGDKE 498

Query: 401 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            ++ P  V    ++  R    +V CG   T A++
Sbjct: 499 QKLVPTCVAALVDYNFR----QVACGHSLTVALT 528


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 167/397 (42%), Gaps = 43/397 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG+ + GQLG G   D   PQ   +   + V  +A G  H L L S      G V++
Sbjct: 138 VWTWGSNSSGQLGDGTTTDRAEPQ--RVEGFTDVVAVAAGDFHSLVLKSD-----GTVWA 190

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G     L+PKPV   +G    +  ++AG++ +  V   G + + G  +F
Sbjct: 191 WGTNFHGQLGQGHTQTGLWPKPVPGLEG----VVALAAGFDFTLAVHADGAVSSWGANSF 246

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G +    SP ++ +     +  +A G  H++ L KD     V+ +GS   GQLG 
Sbjct: 247 GQLGLGTFTQRLSPERIPTL--SGITSVAAGTYHAVALGKD---GTVWTWGSNSSGQLGD 301

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                R+V  P   +G     +  + A    S AL   G +  WG       G   T+D 
Sbjct: 302 GTWNDRAVPAPLPGVG-GARAVASLDAG---SLALLEGGDVLAWGANNSGQLGDGDTADR 357

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALE 328
           + P  +P   + +    G  H L L  DG +   GG   G L          P +V  L 
Sbjct: 358 STPSLVPELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLT 417

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRL----FIISYTPFFPPFFINV-------- 376
            V+++       +AA  + S    G+  + +L        + P   P   +V        
Sbjct: 418 NVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGH 477

Query: 377 ----IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
               +A +  + TWG    GQLG G T D+  P  V+
Sbjct: 478 HSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVS 514



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 171/406 (42%), Gaps = 61/406 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WGA   GQLG G   D  +P L+    LS+V+ +  G  H LAL        G ++
Sbjct: 337 DVLAWGANNSGQLGDGDTADRSTPSLV--PELSAVTAVVGGAQHALALRKD-----GTLW 389

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G +GQLGHG     + P  V         +T ++ G  HS    + G ++  G  +
Sbjct: 390 AWGGGLAGQLGHGGSERHVVPATVMGL----TNVTSMATGSFHSLAALEDGSVWAWGRNS 445

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G       PV+V      +V  +A    HS+ +  D     V+ +G    GQLG
Sbjct: 446 YGQLGDGTVTERHVPVRVPGL--PSVRAVAAAGHHSIAVAMD---GTVWTWGRNAAGQLG 500

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
              ++DR R V++  +T       ++ I+A G    AL ++G ++ WG       G  ++
Sbjct: 501 DGTTRDRARPVAVSGLT------SVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTS 554

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            D   P  +P        A G    + L  DG V   G    G L D   V    P  VA
Sbjct: 555 GDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSP--VA 612

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWV-----RLFIISYTPFFPPF------ 372
           ++ +S++  + V     G+ H+  V G    + W      +L   S+   F P       
Sbjct: 613 VKGLSDIRNISV-----GSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQVRNLT 667

Query: 373 FINVIAENRA----------IMTWGWGEHGQLGLGNTCDQIHPKVV 408
            I  ++  R+          +  WG   +GQLG G    ++ P V+
Sbjct: 668 GITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVI 713



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 171/409 (41%), Gaps = 58/409 (14%)

Query: 36   VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG  T GQLG G      + PQ   ++ LS V  +A G    +A+        G  F
Sbjct: 1038 VWAWGDNTLGQLGDGTSAFTVMWPQ--RVAELSDVESVAAGEQFSVAVAHD-----GTAF 1090

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            SWG    GQLG G+    L P  V        T+  + A   H+  +   G L   GD  
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
             GQLG G     SSP ++       V  ++ G  HSL L  D     V+ +G+   GQLG
Sbjct: 1151 TGQLGDGTTTRRSSPGEIRGVT--RVTAVSTGAWHSLALRLD---GTVWAWGANGFGQLG 1205

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSD-VNCP 272
                  R+V +P    GL D  +V I+A G  S A+ ++G ++TWG   F    D  +  
Sbjct: 1206 DGTTTARAVPVP--VQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSES 1261

Query: 273  QSLP---SSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
            ++LP     L   QA  G + H L L  DG V   G +  G L D  R     P+     
Sbjct: 1262 RALPVQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPV----- 1316

Query: 329  KVSNLDGVKVIQIAAGAEHSAVVTGK----FHW--------------VRLFIISYTPFFP 370
            ++ ++DG  + ++ AGA H+ V  GK    + W               R+ ++       
Sbjct: 1317 RLKDVDG--LTEVRAGAAHT-VALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGL 1373

Query: 371  PFFINVIA---------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            P    + A               TWG   HGQLG+G+   +  P+ + L
Sbjct: 1374 PAATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKL 1422



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 155/374 (41%), Gaps = 59/374 (15%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           SWGA + GQLG G     LSP+   + +LS ++ +A G  H +AL        G V++WG
Sbjct: 240 SWGANSFGQLGLGTFTQRLSPE--RIPTLSGITSVAAGTYHAVALGKD-----GTVWTWG 292

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             SSGQLG G   D   P P+    G R  +  + AG   S  + + G +   G    GQ
Sbjct: 293 SNSSGQLGDGTWNDRAVPAPLPGVGGAR-AVASLDAG---SLALLEGGDVLAWGANNSGQ 348

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG GD    S+P  V       V  +  G +H+L L KD     ++ +G G  GQLG   
Sbjct: 349 LGDGDTADRSTPSLVPEL--SAVTAVVGGAQHALALRKD---GTLWAWGGGLAGQLGHGG 403

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
                V  P   +GL    +  ++     S A   +G ++ WGR      G  + ++ + 
Sbjct: 404 SERHVV--PATVMGL--TNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHV 459

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
           P  +P   S    A   +H + +  DG V   G +  G L D       RP++V     S
Sbjct: 460 PVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAV-----S 514

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L    V+ IAAG  H                          +  +  +  +  WG+   
Sbjct: 515 GL--TSVLAIAAGGSH--------------------------VLALRSDGDVWAWGYNAL 546

Query: 392 GQLGLGNTCDQIHP 405
           GQLG G + D++ P
Sbjct: 547 GQLGDGTSGDKLTP 560



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 169/432 (39%), Gaps = 108/432 (25%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WGA   GQ+G G + D L+P+   + +LS V ++A G +H LA+        G V++
Sbjct: 888  VWAWGANASGQVGDGTVEDRLTPR--RIEALSDVMVIALGESHALAVGED-----GTVWA 940

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  +SGQLG G    +L P  V   +G    +  ++AG   S  V D G  +  G    
Sbjct: 941  WGANASGQLGDGGETPSLLPARVKGLEG----VGSVAAGRAFSLAVRDDGTAWAWGANES 996

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G  +S   P +V+S   K +  ++ G  H++ L +D     V+ +G    GQLG 
Sbjct: 997  GQLGDGSNQSRRVPHRVASV--KGLRAVSAGAHHAMALGED---GAVWAWGDNTLGQLGD 1051

Query: 216  SKDRIRSVSLPQVTIGLHDIE--------------------------------------- 236
                  +V  PQ    L D+E                                       
Sbjct: 1052 GTSAF-TVMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLS 1110

Query: 237  -------------IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS 277
                         +V + A G  + AL A+G L  WG       G  +T+  + P  +  
Sbjct: 1111 PAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRG 1170

Query: 278  SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
                +  + G  H L L  DG V   G +  G L D    ++ R + V ++ + +     
Sbjct: 1171 VTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDG--TTTARAVPVPVQGLRD----- 1223

Query: 338  VIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG 397
            V+ IAAG  HS  V                            +  + TWG+   GQLG G
Sbjct: 1224 VVAIAAGGYHSVAVR--------------------------SDGTVWTWGYNTFGQLGDG 1257

Query: 398  NTCDQIHPKVVN 409
             +  +  P  V+
Sbjct: 1258 TSESRALPVQVH 1269



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 167/406 (41%), Gaps = 57/406 (14%)

Query: 38   SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG--GAHVLALTSPSSVIGGKVFS 95
            SWG+   GQLG G+    LSP  + +    + +++  G  G H +AL +      G + +
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMAD-----GTLQA 1145

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  ++GQLG G       P  +         +T +S G  HS  +   G ++  G   F
Sbjct: 1146 WGDNATGQLGDGTTTRRSSPGEIRGV----TRVTAVSTGAWHSLALRLDGTVWAWGANGF 1201

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G   + + PV V     ++V  IA G  HS+ +  D     V+ +G    GQLG 
Sbjct: 1202 GQLGDGTTTARAVPVPVQGL--RDVVAIAAGGYHSVAVRSD---GTVWTWGYNTFGQLGD 1256

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR------GFNSTSD 268
                 R+  LP   + +H +E V     GD  S AL A+G +  WG       G  S +D
Sbjct: 1257 GTSESRA--LP---VQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311

Query: 269  VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
               P  L      ++   G  H + L  DG V   G + HG L D   V+  R + +  +
Sbjct: 1312 RYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDG--VTGPR-MRLVPK 1368

Query: 329  KVSNLDGVKVIQIAAGAEHSAVV---TGKFHWVR-----LFIISYTPFFPPFFINVIAEN 380
             VS L       I AGA HS       G F W R     L +    P   P  + +++  
Sbjct: 1369 PVSGLP--AATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSGL 1426

Query: 381  RAI----------------MTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            + I                M+WG   HG LGLG    +  P  V L
Sbjct: 1427 KVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLL 1472



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 186/500 (37%), Gaps = 144/500 (28%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG   +GQLG G   D  +P Q+ NL+ +++VS    G +H LAL +      G V 
Sbjct: 638  VWAWGDNNEGQLGDGSWMDRFAPVQVRNLTGITAVS---GGRSHSLALHAD-----GTVR 689

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDG-------------------------HRY--- 126
            +WG    GQLG G +   + P  +    G                         +R+   
Sbjct: 690  AWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQL 749

Query: 127  ------------------TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                               +  ++AG  H+  V   G +   G    GQLG G     + 
Sbjct: 750  GLGAAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGAR 809

Query: 169  PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
             V V          +A G +HSLVL  D     V+ +G  +RGQLG      R    P  
Sbjct: 810  AVTVRGV--SCARSVASGGQHSLVLACD---GTVWTWGENQRGQLGDGTTSARVA--PGR 862

Query: 229  TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS 282
              GL  I  V ++  GD S AL ++G ++ WG       G  +  D   P+ + +     
Sbjct: 863  VEGLEGI--VAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDVM 920

Query: 283  QAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--------PERV---------SSTRPLSV 325
              ALG +H L +  DG V   G +  G L D        P RV         ++ R  S+
Sbjct: 921  VIALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGLEGVGSVAAGRAFSL 980

Query: 326  ALE----------------------------KVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
            A+                             +V+++ G++ +  +AGA H A+  G+   
Sbjct: 981  AVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRAV--SAGAHH-AMALGEDGA 1037

Query: 358  VRLF-----------IISYTPFFPPF---------------FINVIAENRAIMTWGWGEH 391
            V  +             ++T  +P                 F   +A +    +WG  E+
Sbjct: 1038 VWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEY 1097

Query: 392  GQLGLGNTCDQIHPKVVNLG 411
            GQLG G T  ++ P  V +G
Sbjct: 1098 GQLGDGKTGPRLSPAEVKIG 1117



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 153/389 (39%), Gaps = 77/389 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG G +GQLG G     LSP  + +  LS +  ++ G AH LA+        G V++
Sbjct: 588 VWTWGEGFEGQLGDGGGVQRLSP--VAVKGLSDIRNISVGSAHALAVRGD-----GTVWA 640

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G  +D   P  V    G    IT +S G +HS  +   G +   G   +
Sbjct: 641 WGDNNEGQLGDGSWMDRFAPVQVRNLTG----ITAVSGGRSHSLALHADGTVRAWGSNGY 696

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S   P  +       +  +  G  H L L  D     + G+G  + GQLG+
Sbjct: 697 GQLGDGTLTSRVLPSVIPGL--SGIQALHPGHLHVLALHAD---KTLRGWGYNRFGQLGL 751

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN----------- 264
                   + P    G+  +E   ++A    +  + A+G +  WG   +           
Sbjct: 752 GAAGWS--ARPVQVRGIGRVER--LAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHG 807

Query: 265 ----STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
               +   V+C +S+ S         G  H LVL  DG V   G +  G L D      T
Sbjct: 808 ARAVTVRGVSCARSVAS---------GGQHSLVLACDGTVWTWGENQRGQLGD-----GT 853

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
               VA  +V  L+G  ++ +A G + S                            +  +
Sbjct: 854 TSARVAPGRVEGLEG--IVAVAGGGDTSL--------------------------ALRSD 885

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             +  WG    GQ+G G   D++ P+ + 
Sbjct: 886 GTVWAWGANASGQVGDGTVEDRLTPRRIE 914



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 134/324 (41%), Gaps = 32/324 (9%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG    GQLG G     ++P    +  L  +  +A GG   LAL S      G V++
Sbjct: 838  VWTWGENQRGQLGDGTTSARVAPG--RVEGLEGIVAVAGGGDTSLALRSD-----GTVWA 890

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  +SGQ+G G + D L P+ +         +  I+ G +H+  V + G ++  G    
Sbjct: 891  WGANASGQVGDGTVEDRLTPRRIEALS----DVMVIALGESHALAVGEDGTVWAWGANAS 946

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G       P +V     + V  +A G   SL +  D      + +G+ + GQLG 
Sbjct: 947  GQLGDGGETPSLLPARVKGL--EGVGSVAAGRAFSLAVRDD---GTAWAWGANESGQLGD 1001

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSD 268
              ++ R V  P     +  +  V  SA    + AL  +G ++ WG           S   
Sbjct: 1002 GSNQSRRV--PHRVASVKGLRAV--SAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFT 1057

Query: 269  VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVAL 327
            V  PQ +         A G    + +  DG     G + +G L D +    T P LS A 
Sbjct: 1058 VMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGK----TGPRLSPAE 1113

Query: 328  EKVSNLDGVKVIQIAAGAEHSAVV 351
             K+       V+ + A  +H+  +
Sbjct: 1114 VKIGGSKARTVVTVGAWGQHAVAL 1137



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 148/359 (41%), Gaps = 58/359 (16%)

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM-VDALYP 115
           + Q + L+   S   +A G  H L LT P+    G V++WG  S+GQLG  +     L P
Sbjct: 56  AAQAIRLAEPLSPMRIAAGAQHSLFLT-PT----GAVWAWGGNSAGQLGGADTSFQRLSP 110

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
             +   +     I  + +G  HS  +   G ++T G  + GQLG G     + P +V  F
Sbjct: 111 ARLPVLE----DIVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF 166

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
              +V  +A G  HSLVL  D     V+ +G+   GQLG  +   ++   P+   GL   
Sbjct: 167 T--DVVAVAAGDFHSLVLKSD---GTVWAWGTNFHGQLG--QGHTQTGLWPKPVPGLEG- 218

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN 289
            +V ++A  D + A+ A+G + +WG       G  + +    P+ +P+    +  A G  
Sbjct: 219 -VVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGITSVAAGTY 277

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H + L  DG V   G +  G L D        P        + L GV   +  A  +  +
Sbjct: 278 HAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVP--------APLPGVGGARAVASLDAGS 329

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +                          + E   ++ WG    GQLG G+T D+  P +V
Sbjct: 330 L-------------------------ALLEGGDVLAWGANNSGQLGDGDTADRSTPSLV 363



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 9/137 (6%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG    GQLG G     +      +S L + + +  G  H  A + P        F+
Sbjct: 1343 VWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAIGAGAWHSFA-SGPEE----GAFT 1397

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WGR S GQLG G+      P+ +    G +     I+ G + S  ++  G L + G    
Sbjct: 1398 WGRNSHGQLGVGDNAPRAEPQRMKLLSGLKV----IAGGADTSLAMTQEGVLMSWGSSLH 1453

Query: 156  GQLGHGDYRSHSSPVKV 172
            G LG G     +SP +V
Sbjct: 1454 GTLGLGVLGQRASPGRV 1470


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 37/338 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++++V  +ACG  H  A+T     + G+++
Sbjct: 300 EVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVT-----MAGEIY 354

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G   +G LGHG  +    PK ++   +G    +  ++ G  H+  V+ +G LFT G
Sbjct: 355 TWGDGMHYAGLLGHGTDISHWIPKRISGPLEG--LQVASVTCGPWHTALVTSTGQLFTFG 412

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHG+  + + P +V S        +ACG+ H+  +++  +          +++
Sbjct: 413 DGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLF 472

Query: 204 GFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
            +G G + +L  G  + R++   +P     L D     I+     +  L+  GH++T   
Sbjct: 473 TWGDGDKNRLGHGDKEPRLKPTCVP----ALIDFNFHKIACGHSLTVGLTTSGHVFTMGS 528

Query: 259 --WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
             +G+  N  +D   P  +   L   S  + A G  HV VLT   EV   G   +G L  
Sbjct: 529 TVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGH 588

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            +      P  V       L    V  IA GA +SA +
Sbjct: 589 GDGEDRKTPTLVEA-----LKDKHVKYIACGANYSAAI 621



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 172/405 (42%), Gaps = 69/405 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACG  H   +T       G+VF+WG  S G+LGHG   D +
Sbjct: 267 DVLLPRPLESNVVLDVHHIACGFRHAAMVTRQ-----GEVFTWGEESGGRLGHGVGKDVI 321

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
            P+ V        T+  I+ G  H+  V+ +G ++T GDG    G LGHG   SH  P +
Sbjct: 322 QPRLVESL--AMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKR 379

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           +S  +    V  + CG  H+ ++       Q++ FG G  G LG       +++ P+   
Sbjct: 380 ISGPLEGLQVASVTCGPWHTALVTST---GQLFTFGDGTFGVLGHGNR--ENIAYPKEVE 434

Query: 231 GLHDIEIVGISANGDRSAAL-----------SAEGHLYTWGRGFNS------TSDVNCPQ 273
            L  +  + ++     +AA+            + G L+TWG G  +            P 
Sbjct: 435 SLAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 494

Query: 274 SLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            +P+ + F+   +   H L   LT  G V  +G + +G L +P       P  V      
Sbjct: 495 CVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNP-YADGKVPCLVE----D 549

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L G  V +IA GA H AV+T +                            + TWG G +
Sbjct: 550 KLSGESVEEIACGAYHVAVLTSR--------------------------NEVYTWGKGAN 583

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G+LG G+  D+  P +V   +  +++  +  + CG+ ++ AI  H
Sbjct: 584 GRLGHGDGEDRKTPTLV---EALKDKHVKY-IACGANYSAAICLH 624


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 175/407 (42%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H   +T       G+++SWG  S G+LGHG   D  
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTK-----QGEIYSWGEESGGRLGHGVDCDVA 352

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P +
Sbjct: 353 QPKLIDSL--AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKR 410

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V   +   +V  I+CG  H+ ++       Q++ FG G  G LG   DR  S+S+P+   
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTS---AGQLFTFGDGSFGVLG-HGDRA-SLSVPREVE 465

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRG---------FNSTSDV 269
            L  +  V  +     +AA+             + G ++TWG G          +S    
Sbjct: 466 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP 525

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
            C  +L    +F Q A G    + LT  G V  +G + +G L +P+      P+ V  + 
Sbjct: 526 TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLLPVRVEGKL 583

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
             N     V +I+ GA H AV+T +                            + TWG G
Sbjct: 584 HKNF----VEEISCGAYHVAVLTSRTE--------------------------VYTWGKG 613

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G T D+  P +V    + Q R     V CG  FT AI  H
Sbjct: 614 ANGRLGHGGTDDKNTPTLVEALKDKQVRS----VVCGINFTAAICIH 656



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 31/298 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
           +WG G+   G LGHG  V    PK V   DG      ++ IS G  H+  V+ +G LFT 
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDG+FG LGHGD  S S P +V S       + ACG+ H+  +++  +GN         +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           ++ +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT G 
Sbjct: 503 IFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGS 560

Query: 262 GF-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 561 AVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 618



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G       P  +      +   +ACG    +ALT+      G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D L P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
           G  G+LGHG     ++P  V +  +K V  + CG+  +  +   C+   V G      SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669

Query: 209 KRGQLGVSKDR 219
            R    + + R
Sbjct: 670 CRQPFNLRRKR 680


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 175/407 (42%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H   +T       G+++SWG  S G+LGHG   D  
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTK-----QGEIYSWGEESGGRLGHGVDCDVA 352

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P +
Sbjct: 353 QPKLIDSL--AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKR 410

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V   +   +V  I+CG  H+ ++       Q++ FG G  G LG   DR  S+S+P+   
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTS---AGQLFTFGDGSFGVLG-HGDRA-SLSVPREVE 465

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRG---------FNSTSDV 269
            L  +  V  +     +AA+             + G ++TWG G          +S    
Sbjct: 466 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP 525

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
            C  +L    +F Q A G    + LT  G V  +G + +G L +P+      P+ V  + 
Sbjct: 526 TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLLPVRVEGKL 583

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
             N     V +I+ GA H AV+T +                            + TWG G
Sbjct: 584 HKNF----VEEISCGAYHVAVLTSRTE--------------------------VYTWGKG 613

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G T D+  P +V    + Q R     V CG  FT AI  H
Sbjct: 614 ANGRLGHGGTDDKNTPTLVEALKDKQVRS----VVCGINFTAAICIH 656



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 31/298 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
           +WG G+   G LGHG  V    PK V   DG      ++ IS G  H+  V+ +G LFT 
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDG+FG LGHGD  S S P +V S       + ACG+ H+  +++  +GN         +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           ++ +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT G 
Sbjct: 503 IFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGS 560

Query: 262 GF-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 561 AVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 618



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G       P  +      +   +ACG    +ALT+      G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D L P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
           G  G+LGHG     ++P  V +  +K V  + CG+  +  +   C+   V G      SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669

Query: 209 KRGQLGVSKDR 219
            R    + + R
Sbjct: 670 CRQPFNLRRKR 680


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 181/405 (44%), Gaps = 83/405 (20%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G LG G   + + P+L+   + ++V  +ACG  H  A+T     + G+++
Sbjct: 298 EVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVT-----MAGELY 352

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK +    +G    I  ++ G  H+  V+ +G LFT G
Sbjct: 353 TWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEG--LQIAFVACGPWHTALVTSTGQLFTFG 410

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD ++ S P +V S +      +ACG+ H+  +++    +      SGK  
Sbjct: 411 DGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSSTSISSGK-- 468

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
                            T G  D   +G   +GD+ A L                    C
Sbjct: 469 ---------------LFTWGDGDKNRLG---HGDKEARLKP-----------------TC 493

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
             +L  S +F + A G +    LT  G V  +G + +G L +P+  S  +   +  +K++
Sbjct: 494 VAALIDS-NFHKIACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQ--SDGKVPCLVGDKIA 550

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
                 + +IA GA H AV+T K                            + TWG G +
Sbjct: 551 R---ESIEEIACGAYHVAVLTSK--------------------------NEVYTWGKGAN 581

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G+LG G+  D+  P +V   +  ++R  +  + CGS ++ AI  H
Sbjct: 582 GRLGHGDIEDRKTPALV---EALKDRHVKY-IACGSNYSAAICLH 622


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 175/407 (42%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H   +T       G+++SWG  S G+LGHG   D  
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTK-----QGEIYSWGEESGGRLGHGVDCDVA 352

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P +
Sbjct: 353 QPKLIDSL--AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKR 410

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V   +   +V  I+CG  H+ ++       Q++ FG G  G LG   DR  S+S+P+   
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTS---AGQLFTFGDGSFGVLG-HGDRA-SLSVPREVE 465

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRG---------FNSTSDV 269
            L  +  V  +     +AA+             + G ++TWG G          +S    
Sbjct: 466 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP 525

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
            C  +L    +F Q A G    + LT  G V  +G + +G L +P+      P+ V  + 
Sbjct: 526 TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLLPVRVEGKL 583

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
             N     V +I+ GA H AV+T +                            + TWG G
Sbjct: 584 HKNF----VEEISCGAYHVAVLTSRTE--------------------------VYTWGKG 613

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G T D+  P +V    + Q R     V CG  FT AI  H
Sbjct: 614 ANGRLGHGGTDDKNTPTLVEALKDKQVRS----VVCGINFTAAICIH 656



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 31/298 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
           +WG G+   G LGHG  V    PK V   DG      ++ IS G  H+  V+ +G LFT 
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDG+FG LGHGD  S S P +V S       + ACG+ H+  +++  +GN         +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           ++ +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT G 
Sbjct: 503 IFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGS 560

Query: 262 GF-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 561 AVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 618



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G       P  +      +   +ACG    +ALT+      G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D L P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
           G  G+LGHG     ++P  V +  +K V  + CG+  +  +   C+   V G      SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669

Query: 209 KRGQLGVSKDR 219
            R    + + R
Sbjct: 670 CRQPFNLRRKR 680


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 162/391 (41%), Gaps = 62/391 (15%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + ++ WG  + GQLG G + +E  L P  +     S V  +ACG  H L LT+      G
Sbjct: 1   MALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTA-----NG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V++ G     QLGH    +    +P+   +   Y +  I+ G  HS  +++ G + + G
Sbjct: 56  QVYACGNNDHHQLGH----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111

Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           D   GQ+GH  D      P  +   V++ V QIACG  HSL L   C   ++Y +GS   
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL-TSC--GELYSWGSNIY 168

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGI-----SANGDRSAALSAEGHLYTWGR---- 261
           GQLGV   +     LP     L    I+GI     +  G+ S  +S    ++ WG+    
Sbjct: 169 GQLGVQSPK----DLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCG 224

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G N   +   P  L S  +L       G  + + LT +G V   G  ++G L      
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSN 284

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P       V  L G  + Q+A G  H+                         + ++
Sbjct: 285 NEMIP-----RMVIELMGSTITQVACGNRHT-------------------------LALV 314

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                + ++G G  GQLG  NT  Q  PKVV
Sbjct: 315 PSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +++SWG+   GQLG     D   S   L L+++  + +  +ACGG H   ++  S+V G 
Sbjct: 159 ELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFG- 217

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
               WG+ + GQLG  +  +  YP  +         +  ++ G  +S F+++ G +FTCG
Sbjct: 218 ----WGKNTCGQLGLNDEQNRAYPSQLK--SMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L+    G +VY FG G  G
Sbjct: 272 AGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPS--GGRVYSFGLGASG 329

Query: 212 QLGVSKDRIRSVSLPQVTIG 231
           QLG +++ I S +LP+V IG
Sbjct: 330 QLG-TRNTI-SQTLPKVVIG 347


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 175/407 (42%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H   +T       G+++SWG  S G+LGHG   D  
Sbjct: 298 DYLVPKPLEFAVRLDVQNISCGGRHAALVTK-----QGEIYSWGEESGGRLGHGVDCDVA 352

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P +
Sbjct: 353 QPKLIDSL--AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKR 410

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V   +   +V  I+CG  H+ ++       Q++ FG G  G LG   DR  S+S+P+   
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTS---AGQLFTFGDGSFGVLG-HGDRA-SLSVPREVE 465

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRG---------FNSTSDV 269
            L  +  V  +     +AA+             + G ++TWG G          +S    
Sbjct: 466 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVP 525

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
            C  +L    +F Q A G    + LT  G V  +G + +G L +P+      P+ V  + 
Sbjct: 526 TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLLPVRVEGKL 583

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
             N     V +I+ GA H AV+T +                            + TWG G
Sbjct: 584 HKNF----VEEISCGAYHVAVLTSRTE--------------------------VYTWGKG 613

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G T D+  P +V    + Q R     V CG  FT AI  H
Sbjct: 614 ANGRLGHGGTDDKNTPTLVEALKDKQVRS----VVCGINFTAAICIH 656



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 31/298 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
           +WG G+   G LGHG  V    PK V   DG      ++ IS G  H+  V+ +G LFT 
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDG+FG LGHGD  S S P +V S       + ACG+ H+  +++  +GN         +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           ++ +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT G 
Sbjct: 503 IFTWGDGDKGRLGHGDKDSRFV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGS 560

Query: 262 GF-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                  N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 561 AVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 618



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G       P  +      +   +ACG    +ALT+      G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D L P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
           G  G+LGHG     ++P  V +  +K V  + CG+  +  +   C+   V G      SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669

Query: 209 KRGQLGVSKDR 219
            R    + + R
Sbjct: 670 CRQPFNLRRKR 680


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 153/338 (45%), Gaps = 38/338 (11%)

Query: 36   VWSWGAGTDGQLGT------GRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSV 88
            V++WGAG  GQLG+       +++   +PQ +LNL     +S +ACG  H + LTS    
Sbjct: 1234 VYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILS-IACGRWHNMTLTSER-- 1290

Query: 89   IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
               +V SWG G  GQLG    +    P+ V   DG R     +  GW HS  + +SG + 
Sbjct: 1291 ---QVLSWGAGEFGQLGLDHNLSKGTPQMVKALDG-RAPCKILCGGW-HSAAILESGKIL 1345

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSF--VNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
              G   +GQLGHGD +S S+P +V+ +  +   V     G  H+LV++   + N+V+  G
Sbjct: 1346 LWGKNVYGQLGHGDTKSCSAP-RVNQYLRLEGKVRTAGLGANHTLVVM---VANKVFAMG 1401

Query: 207  SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
            S   GQLG+        ++P     L+   I  ++A    S ALS  G +++WG      
Sbjct: 1402 SNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQ 1461

Query: 261  RGFNSTSDVNCPQSLPSSLSF----SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
             G  + +D   P  L             A G+     ++  GEV   G    G L    +
Sbjct: 1462 LGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPK 1521

Query: 317  VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            V +  P  +        D  +V+QIA G +H A +  K
Sbjct: 1522 VLTYAPSLIK-------DFSEVVQIACGFKHMAGIVFK 1552



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 149/355 (41%), Gaps = 50/355 (14%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G VF WG  + GQLG   +  A  P  +        +I HISA  + S FV+DSG L+  
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLA--TSIVHISANSDMSAFVTDSGSLYVS 1667

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G    G+LG G      +PV++ S     + ++ACG  H L L ++    +VY +G GK 
Sbjct: 1668 GGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEE---KRVYAWGDGKW 1724

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---S 267
            G  GVS      V  PQ    L    I+G+ A G  SAALS  G L+ WG+  N      
Sbjct: 1725 GNAGVSN--TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLG 1782

Query: 268  DVNCPQSLPSSLS-----FSQAALGWNH--VLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
              +  +  P+ +S         +LG NH  VL+      +   G + +G L   + V  +
Sbjct: 1783 TTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRS 1842

Query: 321  RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
                  L  V  LD  +++  + GA H+A V+                          + 
Sbjct: 1843 -----TLTAVDALDDRQIVSASCGAAHTAAVS--------------------------QY 1871

Query: 381  RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
              ++TWG G +GQLGL     +     V L       D  ++V CG   T  +S 
Sbjct: 1872 GDLITWGNGRNGQLGLKAGLSKDIENPVQL--PAICNDPMVKVVCGQEVTIVVSE 1924



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 143/323 (44%), Gaps = 29/323 (8%)

Query: 36  VWSWGAGTDGQLGTG----RLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           ++++G G  G+LG G    R  + +  P+ +   +  SV  +ACG     ALT       
Sbjct: 517 IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDT----- 571

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           GKV++WG+ + G+LG G         P    D   + +  IS G NH+   +D    F  
Sbjct: 572 GKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVW 631

Query: 151 GDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           G  TFGQLG     S+   P +++S    N+  IACG  H+L+         V   G G 
Sbjct: 632 GSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNT---GSVMSCGKGW 688

Query: 210 RGQLG---VSKDRIRSVSLP---QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
            GQLG          S +LP   ++  G  D  IV +SA  + SAA++ +G L+TWG+G 
Sbjct: 689 HGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGD 748

Query: 263 -FNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
            +    + +  ++ P  + F         ++G +H+L L   G     G    G L   E
Sbjct: 749 EYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGE 808

Query: 316 RVS-STRPLSVALEKVSNLDGVK 337
                T P  + L +    DG++
Sbjct: 809 MCERETLPRPIMLCRRGLRDGIE 831



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 149/327 (45%), Gaps = 30/327 (9%)

Query: 40   GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGKVFSWG 97
            G    G+LG G  H   +P  + + SL++V ++  ACG  H LALT        +V++WG
Sbjct: 1668 GGSEHGRLGLG--HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEK-----RVYAWG 1720

Query: 98   RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             G  G  G     D L P+ ++       +I  + AG  HS  +S  G LF  G  + GQ
Sbjct: 1721 DGKWGNAGVSNTNDVLEPQELSSLAA--CSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQ 1778

Query: 158  LGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
            LG G    +  SP K+S+ ++  V  ++ G  HS VL++    N ++  G    GQLG+ 
Sbjct: 1779 LGLGTTSAAEDSPTKISN-LDGVVMDVSLGANHSAVLMQVTSPN-LFTCGLNANGQLGLG 1836

Query: 217  KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS--------TSD 268
             D +   +L  V   L D +IV  S     +AA+S  G L TWG G N         + D
Sbjct: 1837 -DFVDRSTLTAVD-ALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKD 1894

Query: 269  VNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            +  P  LP+  +    +   G    +V++  GE+ M G  +   +      S  R   V+
Sbjct: 1895 IENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAG--YESTIGLGGNSSRRREFDVS 1952

Query: 327  LEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              +V  L  ++  QIA G+ H   + G
Sbjct: 1953 FREVEGL--IQPTQIAVGSVHVLALVG 1977



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 137/281 (48%), Gaps = 37/281 (13%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
            +V++WG G  G  G    +D L PQ   LSSL++ S++    GG H  AL+       G 
Sbjct: 1715 RVYAWGDGKWGNAGVSNTNDVLEPQ--ELSSLAACSIIGVHAGGFHSAALSQY-----GD 1767

Query: 93   VFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSD--SGCLFT 149
            +F WG+ S+GQLG G    A   P  ++  DG    +  +S G NHS  +    S  LFT
Sbjct: 1768 LFMWGKNSNGQLGLGTTSAAEDSPTKISNLDG---VVMDVSLGANHSAVLMQVTSPNLFT 1824

Query: 150  CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            CG    GQLG GD+   S+   V +  ++ +   +CG  H+  + +   G+ +  +G+G+
Sbjct: 1825 CGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQ--YGDLIT-WGNGR 1881

Query: 210  RGQL----GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TW 259
             GQL    G+SKD    V LP +     +  +V +    + +  +S +G LY      T 
Sbjct: 1882 NGQLGLKAGLSKDIENPVQLPAIC----NDPMVKVVCGQEVTIVVSEKGELYMAGYESTI 1937

Query: 260  GRGFNSTS----DVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
            G G NS+     DV+  + +   +  +Q A+G  HVL L G
Sbjct: 1938 GLGGNSSRRREFDVSF-REVEGLIQPTQIAVGSVHVLALVG 1977



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 143/348 (41%), Gaps = 56/348 (16%)

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            +++WG G +G+LGHG       P+ +T F  +   I  ++ G  HS   S  G ++  G 
Sbjct: 1181 IYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNT-KIVEVACGCEHSLARSFDGGVYAWGA 1239

Query: 153  GTFGQLGHGD------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            G  GQLG  +           +P  V +     +  IACG  H++ L  +    QV  +G
Sbjct: 1240 GDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSE---RQVLSWG 1296

Query: 207  SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
            +G+ GQLG+  D   S   PQ+   L       I   G  SAA+   G +  WG+     
Sbjct: 1297 AGEFGQLGL--DHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQ 1354

Query: 262  -GFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPE 315
             G   T   + P   Q L        A LG NH LV+    +V  +G +  G   L DP 
Sbjct: 1355 LGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPS 1414

Query: 316  RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT-------------GKF-HWVRLF 361
            R     P+S     +  L+G  + Q+AAG +HS  ++             G+  H     
Sbjct: 1415 RTGKNVPVS-----IEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITD 1469

Query: 362  IISYTPFF-----PP---------FFINVIAENRAIMTWGWGEHGQLG 395
             ++ TP       PP          F   ++    + TWG GE G+LG
Sbjct: 1470 KLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELG 1517



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 35/279 (12%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA-GWNHSGFVSDSGCLF 148
           G  VF WG G +G+LG+        P  V  F   R  +  + A G  H+ F+S  G + 
Sbjct: 89  GSHVFMWGDGENGKLGNQSEEIQHVPYIVPAF---RNVLVKVCALGKQHTLFLSADGVVL 145

Query: 149 TCGDGTFGQLGHGDYR-SHSSPV----------KVSSFVN--KNVHQIACGMRHSLVLLK 195
           +CG   +GQLG GD+  S S+PV          K+ + +    N+  IA G  HSL L  
Sbjct: 146 SCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
                +++ +GSG  G+LG+  D   +   P+    L + ++V I+     +AA++  G 
Sbjct: 206 T---GKIFSWGSGSWGKLGIGSDA--NAESPRFVASLQNSKVVHIACGAHHTAAITTVGD 260

Query: 256 LYTWGRGF------NSTSDVNCPQSLPSSLSFSQAA---LGWNHVLVLTGDGEVLMLGGS 306
           ++TWG+G        S  +   P+ L +SL    A     G +H LV+   G++  +G +
Sbjct: 261 VWTWGKGLRGQLGHKSVKEEFSPR-LNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGAN 319

Query: 307 HHGML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
            HG L      +R+  T     A EKV ++D      IA
Sbjct: 320 THGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIA 358



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 15/232 (6%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V SWGAG  GQLG      + +PQ++      +   + CGG H  A+        GK+ 
Sbjct: 1291 QVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE-----SGKIL 1345

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
             WG+   GQLGHG+      P+ V  +      +     G NH+  V  +  +F  G   
Sbjct: 1346 LWGKNVYGQLGHGDTKSCSAPR-VNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNI 1404

Query: 155  FGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQLG  D      + PV +     KN+ Q+A G +HSL L    +  +V+ +G    GQ
Sbjct: 1405 DGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLAL---SVFGEVWSWGGSPFGQ 1461

Query: 213  LGVSKDRIRSVSLPQVTIGLHDI--EIVGISANGDRSAALSAEGHLYTWGRG 262
            LG   + I     P   +  H I  ++  I+     SAA+SA+G ++TWG G
Sbjct: 1462 LG--HETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNG 1511



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 21/235 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++SWG+G+ G+LG G   +  SP+ +     S V  +ACG  H  A+T+      G V+
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTV-----GDVW 262

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+G  GQLGH  + +   P+        +     I  G +H+  +  SG L++ G  T
Sbjct: 263 TWGKGLRGQLGHKSVKEEFSPRLNASL--RKCGAQKIRCGDDHTLVILRSGQLYSMGANT 320

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG GD      P  V+ F N+ V  I      S+ L       +V+ FG+     L 
Sbjct: 321 HGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNT---GKVFAFGNETEPHL- 376

Query: 215 VSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
              +RI     P+   GL   + I+ ++       A+S  G L+ W R F+S  +
Sbjct: 377 ---NRI-----PRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW-RPFSSEEE 422



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 164/409 (40%), Gaps = 102/409 (24%)

Query: 35   KVWSWGAGTDGQLG------TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
            KV++ G+  DGQLG      TG+ +  +S + LN  ++  V   A G  H LAL+     
Sbjct: 1396 KVFAMGSNIDGQLGLDDPSRTGK-NVPVSIEELNGKNICQV---AAGDQHSLALS----- 1446

Query: 89   IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGC 146
            + G+V+SWG    GQLGH  + D L P P+   + H+    +  I+ G+  S  +S  G 
Sbjct: 1447 VFGEVWSWGGSPFGQLGHETITDKLAPTPL--LERHKIPPDVKSIACGYTFSAAMSAKGE 1504

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            +FT G+G  G+LGH       +P  +  F    V QIACG +H   +             
Sbjct: 1505 VFTWGNGESGELGHAPKVLTYAPSLIKDF--SEVVQIACGFKHMAGI------------- 1549

Query: 207  SGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSA---------------AL 250
                    V K R++++ L     IG +     G  A G  S                A 
Sbjct: 1550 --------VFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAF 1601

Query: 251  SAE-----GHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVL--VLTGD 297
            SA      G ++ WG       G         P  + S L+ S   +  N  +   +T  
Sbjct: 1602 SASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDS 1661

Query: 298  GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
            G + + GGS HG L       +  P+     ++ +L+ VK++++A G  H   +T     
Sbjct: 1662 GSLYVSGGSEHGRLGLGHMAPAPTPV-----EIRSLNTVKIMKVACGTYHCLALT----- 1711

Query: 358  VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
                                 E + +  WG G+ G  G+ NT D + P+
Sbjct: 1712 ---------------------EEKRVYAWGDGKWGNAGVSNTNDVLEPQ 1739



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 127/285 (44%), Gaps = 40/285 (14%)

Query: 6   MEETE---KGKSALINNAKPKIEEEEEE-------QQVVK---------VWSWGAGTDGQ 46
           +E TE   + ++AL+ + + ++ EEE E       ++ ++         V+ WG G +G+
Sbjct: 43  LENTEGDFRREAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGK 102

Query: 47  LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH 106
           LG      +  P ++       V + A G  H L L++      G V S G    GQLG 
Sbjct: 103 LGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSAD-----GVVLSCGSNVYGQLGM 157

Query: 107 GEMV-----DALYPKPVTFFDGHRYTITH------ISAGWNHSGFVSDSGCLFTCGDGTF 155
           G+ +         P      D  +  I        I+AG+ HS  ++D+G +F+ G G++
Sbjct: 158 GDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSW 217

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G   +  SP  V+S  N  V  IACG  H+  +    +G+ V+ +G G RGQLG 
Sbjct: 218 GKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAIT--TVGD-VWTWGKGLRGQLG- 273

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
               ++    P++   L       I    D +  +   G LY+ G
Sbjct: 274 -HKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMG 317



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 21/238 (8%)

Query: 35  KVWSWGAGTDGQ--LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           KV++WG    G+  LG+G+    + PQL+   S   V  ++ G  H    T        K
Sbjct: 573 KVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH-----K 627

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            F WG  + GQLG    + +  P P          I  I+ G  H+   +++G + +CG 
Sbjct: 628 FFVWGSNTFGQLGIPH-ISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVH--------QIACGMRHSLVLLKDCLGNQVYG 204
           G  GQLGHGDY S ++  K   +  K V         +++ G   S  +       +++ 
Sbjct: 687 GWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK---GRLFT 743

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           +G G   QLG   +  ++ + P+       I +V +S       AL   G  Y+WG G
Sbjct: 744 WGKGDEYQLG--HESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNG 799



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 138/316 (43%), Gaps = 58/316 (18%)

Query: 145 GCLFTCGDGTFGQLGHG-DY-RSHSS---PVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
           G ++T G G FG+LGHG +Y RS  S   P ++ +    +V  IACG + S   L D   
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACG-KDSTAALTDT-- 571

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYT 258
            +VY +G   +G+LG+   +  ++ +PQ+   L    +  IS  G   AA S + H  + 
Sbjct: 572 GKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISL-GRNHAACSTDMHKFFV 630

Query: 259 WGRGFNSTSDVNCPQ------------SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
           WG   N+   +  P             SL  +   S A  GW H L+ T  G V+  G  
Sbjct: 631 WGS--NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGW-HTLISTNTGSVMSCGKG 687

Query: 307 HHGMLS--DPERVSS-TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
            HG L   D E +++ ++ L    + V       +++++AG E SA +T K    RLF  
Sbjct: 688 WHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKG---RLF-- 742

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 423
                                TWG G+  QLG  ++ ++ +P+ V    EF  +   ++V
Sbjct: 743 ---------------------TWGKGDEYQLGHESSKNEAYPREV----EFFAKIRVVDV 777

Query: 424 FCGSGFTYAISRHCLP 439
             G     A+    LP
Sbjct: 778 SIGDSHMLALDYSGLP 793



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 111/283 (39%), Gaps = 57/283 (20%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  GDG  G+LG+        P  V +F N  V   A G +H+L L  D +   V   G
Sbjct: 92  VFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGV---VLSCG 148

Query: 207 SGKRGQLGVSK---DRIRSVSLPQVTIGLHDIE--------IVGISANGDRSAALSAEGH 255
           S   GQLG+      R   VS P     L  ++        IVGI+A    S AL+  G 
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGK 208

Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGS 306
           +++WG       G  S ++   P+   +SL  S+    A G +H   +T  G+V   G  
Sbjct: 209 IFSWGSGSWGKLGIGSDANAESPR-FVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267

Query: 307 HHGMLSDPERVSSTRP-LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
             G L          P L+ +L K          +I  G +H+                 
Sbjct: 268 LRGQLGHKSVKEEFSPRLNASLRKCG------AQKIRCGDDHTL---------------- 305

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                     VI  +  + + G   HGQLGLG+  D+I P +V
Sbjct: 306 ----------VILRSGQLYSMGANTHGQLGLGDATDRIIPTLV 338



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG G + QLG     +E  P+ +   +   V  ++ G +H+LAL        G  +
Sbjct: 740 RLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALD-----YSGLPY 794

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTF 120
           SWG GS+GQLGHGEM +    P+P+  
Sbjct: 795 SWGNGSAGQLGHGEMCERETLPRPIML 821



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 71/188 (37%), Gaps = 36/188 (19%)

Query: 235  IEIVGISANGDRSAALSAEGHLYTWGRGFNST------SDVNCPQ---SLPSSLSFSQAA 285
             E +   AN      L  E H+YTWG G N        +  + PQ   S PS+    + A
Sbjct: 1160 FEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVA 1219

Query: 286  LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR-PLSVALEKVSNLDGVKVIQIAAG 344
             G  H L  + DG V   G    G L   E     +   +   + V NL    ++ IA G
Sbjct: 1220 CGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACG 1279

Query: 345  AEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH 404
              H+  +T +                          R +++WG GE GQLGL +   +  
Sbjct: 1280 RWHNMTLTSE--------------------------RQVLSWGAGEFGQLGLDHNLSKGT 1313

Query: 405  PKVVNLGD 412
            P++V   D
Sbjct: 1314 PQMVKALD 1321



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 89/228 (39%), Gaps = 56/228 (24%)

Query: 255 HLYTWGRGFN------STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
           H++ WG G N      S    + P  +P+  ++     ALG  H L L+ DG VL  G +
Sbjct: 91  HVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSN 150

Query: 307 HHGML-------------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV-- 351
            +G L             S+P +  S   L   ++ ++N+ G     IAAG  HS  +  
Sbjct: 151 VYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVG-----IAAGYYHSLALND 205

Query: 352 TGKFH------WVRLFIISYTPFFPPFFINVIAENRA------------------IMTWG 387
           TGK        W +L I S      P F+  +  ++                   + TWG
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWG 265

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            G  GQLG  +  ++  P+   L    +    Q ++ CG   T  I R
Sbjct: 266 KGLRGQLGHKSVKEEFSPR---LNASLRKCGAQ-KIRCGDDHTLVILR 309


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 10/226 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G DG+LG G       P+++       V  +ACGGAH   +T+      G+++
Sbjct: 688 EVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITA-----SGELY 742

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+G  G+LGHG+  D L PK V    G R       +G   +  V+D  C+++ GDG 
Sbjct: 743 TWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGD 802

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P++V       V ++ CG + S+ L        VY +G G   +LG
Sbjct: 803 YGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTA---SGSVYTWGKGDYHRLG 859

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              D    V  P+    L   +++ I+       A +  G +YTWG
Sbjct: 860 HGTD--DHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWG 903



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 31/286 (10%)

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           GG H LAL++      G+V+SWG G  G+LGHG       P+ +    G    +  ++ G
Sbjct: 676 GGKHCLALSAE-----GEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKE--VVDVACG 728

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
             HS  ++ SG L+T G G +G+LGHGD      P KV +     V  +ACG   +  L 
Sbjct: 729 GAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLC 788

Query: 195 ---KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
               DC    V+ +G G  G+LG  +       +P     L  + ++ +      S AL+
Sbjct: 789 VTDDDC----VWSWGDGDYGKLG--RGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALT 842

Query: 252 AEGHLYTWGRG------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLM 302
           A G +YTWG+G        +   V  P+ + ++L   +    A+G  H +  T  GEV  
Sbjct: 843 ASGSVYTWGKGDYHRLGHGTDDHVRRPKRV-AALQGKKVICIAVGSLHCVACTDTGEVYT 901

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            G +  G L D    +  +P  VA      L G K+ +++ G+ H+
Sbjct: 902 WGDNDEGQLGDGTVNAIHKPRLVA-----ALQGKKINRVSCGSAHT 942



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 132/324 (40%), Gaps = 59/324 (18%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           +++G  H   +S  G +++ G+G  G+LGHG+  S   P  + S   K V  +ACG  HS
Sbjct: 673 VNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHS 732

Query: 191 LVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDR 246
             +       ++Y +G G+ G+L  G S D++R    P+    L    +  V   +   +
Sbjct: 733 ACITA---SGELYTWGKGRYGRLGHGDSDDQLR----PKKVEALSGWRVRCVACGSGDAQ 785

Query: 247 SAALSAEGHLYTW--------GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
           +  ++ +  +++W        GRG +    V     L   +   +   G    + LT  G
Sbjct: 786 TLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASG 845

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            V   G   +  L         RP     ++V+ L G KVI IA G+ H    T      
Sbjct: 846 SVYTWGKGDYHRLGHGTDDHVRRP-----KRVAALQGKKVICIAVGSLHCVACT------ 894

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH-PKVV-NLGDEFQN 416
                               +   + TWG  + GQLG G T + IH P++V  L  +  N
Sbjct: 895 --------------------DTGEVYTWGDNDEGQLGDG-TVNAIHKPRLVAALQGKKIN 933

Query: 417 RDTQLEVFCGSGFTYAISRHCLPS 440
           R     V CGS  T A S  C PS
Sbjct: 934 R-----VSCGSAHTVAWST-CNPS 951


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 184/424 (43%), Gaps = 69/424 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW+  A +DG   +     D L P+ L    +  V+ + CG  HV ALT+      G+V
Sbjct: 223 EVWTDAAPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHV-ALTTRQ----GEV 277

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG    G+LGHG   D   PK V         +  IS G  H+  +S SG LF  GDG
Sbjct: 278 FTWGEELGGRLGHGTDTDISRPKLVESLS--VTIVDFISCGEFHTCAISASGDLFNWGDG 335

Query: 154 TF--GQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           ++  G LG+    SH  P +VS  +    V  +ACG  HS ++       ++Y FG GK 
Sbjct: 336 SYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWHSALITS---TGRLYTFGDGKF 392

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS----------AEGHLYTWG 260
           G LG       S + P+    L+    V ++     SAA+               LYTWG
Sbjct: 393 GALG--HGNRESAAYPKEVEALNGFRTVKVACGVWHSAAIVEASVQTGMNVVSKKLYTWG 450

Query: 261 RGFNSTSDVNCPQS--LPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G  +       ++  +P+ L      +F Q   G N  + L   G V  +G S +G L 
Sbjct: 451 DGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALATSGHVYTMGSSDNGQLG 510

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           +P+  S  +   +  +K++N     V +I+ GA H AV+T +                  
Sbjct: 511 NPK--SDGKHPCLVKDKLAN---ELVEEISCGAAHVAVLTSR------------------ 547

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                     + TWG G +G+LG G+  D+  P +V   +  ++R  +  + CGS FT  
Sbjct: 548 --------SEVYTWGLGANGRLGHGDLNDKKTPTIV---EALKDRHVK-SISCGSNFTTC 595

Query: 433 ISRH 436
           I  H
Sbjct: 596 ICIH 599



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 137/358 (38%), Gaps = 94/358 (26%)

Query: 91  GKVFSWGR---GSSGQLGHGE----MVDALYPKPV---TFFDGHRYTITHISAGWNHSGF 140
           G V+ WG     ++   GH       VD L PKP+      D     +  I  G  H   
Sbjct: 216 GDVYVWGEVWTDAAPSDGHTSSSCSKVDVLIPKPLESDVVLD-----VNQIVCGSRHVAL 270

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            +  G +FT G+   G+LGHG     S P  V S     V  I+CG  H+  +     G+
Sbjct: 271 TTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDFISCGEFHTCAI--SASGD 328

Query: 201 QV-YGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYT 258
              +G GS + G LG   D   S  LP+   G L  ++++ ++     SA +++ G LYT
Sbjct: 329 LFNWGDGSYRAGLLGY--DTGASHWLPKRVSGPLEGLQVLSVACGSWHSALITSTGRLYT 386

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
           +                                    GDG+   LG   HG      R S
Sbjct: 387 F------------------------------------GDGKFGALG---HG-----NRES 402

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           +  P     ++V  L+G + +++A G  HSA +        + ++S              
Sbjct: 403 AAYP-----KEVEALNGFRTVKVACGVWHSAAIVEASVQTGMNVVS-------------- 443

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 434
             + + TWG G+  +LG G+   ++ P  +   L   F       ++ CG   T A++
Sbjct: 444 --KKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFH------QLGCGQNMTVALA 493


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 154/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+         V  + CG  H + L        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLE-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +F  G G+ G
Sbjct: 59  GCNDLGQLGHEKARKK--PEQVVSLDAQ--NIVAVSCGEAHTLALNDKGQVFAWGLGSDG 114

Query: 157 QLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG          P  V S    ++ Q+ACG  HSL L +   G +++ +G  K GQLG+
Sbjct: 115 QLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALAR---GGEIFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
            +     V  PQV   L  I    ISA G  S  L+  G ++ WGR      G     D 
Sbjct: 172 GQQG-ACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L +  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 RFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H+                         +  I  +  I ++G
Sbjct: 286 RKVFELMGSVVSQIACGRQHT-------------------------LAFIPSSGKIDSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG  +TC++I P  V 
Sbjct: 321 LGGNGQLGTRSTCNRISPTPVK 342



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 95/182 (52%), Gaps = 12/182 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG G+DGQLG   + D L  P+ +   S   ++ +ACG  H LAL       GG++
Sbjct: 104 QVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALAR-----GGEI 158

Query: 94  FSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FSWG+   GQLG G+       P+ +    G  +    ISAG  HS  ++ SG +F  G 
Sbjct: 159 FSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPF--GQISAGGAHSFGLTLSGAIFGWGR 216

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             FGQLG GD      PV + +  ++ V  I CG  H+  L K+     V+ FG+G  GQ
Sbjct: 217 NKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKE---GGVFTFGAGGYGQ 273

Query: 213 LG 214
           LG
Sbjct: 274 LG 275



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 25/231 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG    GQLG G+    + SPQ++          ++ GGAH   LT     + G +
Sbjct: 157 EIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG G+  D  +P  +      +  + +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQ--VVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+L  +      ++  FG G  GQL
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPS--SGKIDSFGLGGNGQL 327

Query: 214 GVSK--DRI---------RSVSLPQVTIGLHDIE----IVGISANGDRSAA 249
           G     +RI         R+ + P V + + + E    +  I A GD+S A
Sbjct: 328 GTRSTCNRISPTPVKGCWRAHADPCVELCISEAERSYCVKRIYAGGDQSFA 378



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 140/300 (46%), Gaps = 30/300 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
           V++ G    GQLG    H++   +   + SL + +++A  CG AH LAL        G+V
Sbjct: 55  VYTCGCNDLGQLG----HEKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDK-----GQV 105

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG GS GQLG   + D L   P T        IT ++ G+ HS  ++  G +F+ G  
Sbjct: 106 FAWGLGSDGQLGLSIVEDCLR-VPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQN 164

Query: 154 TFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            +GQLG G   +   SP  + S       QI+ G  HS  L    L   ++G+G  K GQ
Sbjct: 165 KYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGL---TLSGAIFGWGRNKFGQ 221

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+  +  R    P +   L   ++V I    D +AAL+ EG ++T+G       G NST
Sbjct: 222 LGLGDNDDR--RFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279

Query: 267 SDVNCPQSLPSSLS--FSQAALGWNHVLVL---TGDGEVLMLGGS-HHGMLSDPERVSST 320
           +    P+ +   +    SQ A G  H L     +G  +   LGG+   G  S   R+S T
Sbjct: 280 NHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPT 339


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 163/382 (42%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  + P+  +     +V  + CG  H   +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +F+ G    G
Sbjct: 59  GCNDLGQLGHDKSRKK--PEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAAHG 114

Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           Q+G      +   P  + S  +  + Q+ACG  HSL L K+   + +Y +G  + GQLG+
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKE---SNIYSWGQNQYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             ++ R  S P+    L  I    I+A G  S AL+  G ++ WGR      G N  +D 
Sbjct: 172 GSEK-RKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           + P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 SDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H+              +++ P            +  I ++G
Sbjct: 286 RKVFELMGNIVTQIACGRQHT--------------LAFVP-----------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG+G+T ++  P +V 
Sbjct: 321 LGGNGQLGIGSTSNKKSPSMVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   + P+   FF      +  +  G  H+GFV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--NVRDVGCGNRHTGFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   + +  ++CG  H+L L       QV+ +G    
Sbjct: 59  GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDK---GQVFSWGHAAH 113

Query: 211 GQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
           GQ+GVS  +D IR   +P+    L DI+IV ++     S ALS E ++Y+WG+      G
Sbjct: 114 GQIGVSIAEDYIR---VPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLG 170

Query: 263 FNSTS-DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             S     + P+ +   S + F+  A G  H   LT  G +   G +  G L   +    
Sbjct: 171 LGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
           + P   AL K  +L   K+I I  G +H+A +T                          +
Sbjct: 231 SDP---ALLK--SLRSQKIIYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +   +++P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSASHEVNPRKV 288



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 14/183 (7%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           ++SWG    GQLG G     E +P+  ++ SLS +    +A GG H  ALT     I G 
Sbjct: 158 IYSWGQNQYGQLGLGSEKRKESAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G 
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQK--IIYICCGEDHTAALTKEGGVFTFGA 268

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH       +P KV   +   V QIACG +H+L  +      ++Y FG G  GQ
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326

Query: 213 LGV 215
           LG+
Sbjct: 327 LGI 329



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQ+G     D +  P+  N+ SLS + +  +ACG  H LAL+  S+    
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPR--NIKSLSDIQIVQVACGHHHSLALSKESN---- 157

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            ++SWG+   GQLG G E      P+ +    G  +   HI+AG  HS  ++ SG +F  
Sbjct: 158 -IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPF--AHIAAGGGHSFALTISGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D    S P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 101/414 (24%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG    G+LG G       P+L+   S+ +V  +ACG  H  A+T+      G +
Sbjct: 305 AEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITAT-----GDL 359

Query: 94  FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+  +G LGHG  V    PK V+   +G    ++ +S G  H+  ++ SG L+T 
Sbjct: 360 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEG--LQVSAVSCGTWHTALITSSGKLYTF 417

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYG 204
           GDGTFG LGHG+  + S P +V S        ++CG+ H+  +++  +        +++ 
Sbjct: 418 GDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFT 477

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +G G + +LG                            +GDRS+ L              
Sbjct: 478 WGDGDKYRLG----------------------------HGDRSSKLK------------- 496

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
                  P  +PS    +F +A  G    + LT  G +   G S +G L +P   +  R 
Sbjct: 497 -------PTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPN--NDGRY 547

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             +  EK   L G  V+++  GA H AV+T                          ++  
Sbjct: 548 PRLVEEK---LGGGGVVEVVCGAYHVAVLT--------------------------QSGE 578

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P  V   +  ++R  +  + CGSGFT AI +H
Sbjct: 579 VYTWGKGANGRLGHGDIADRKTPTFV---EALRDRSVK-RIACGSGFTAAICQH 628



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 120/333 (36%), Gaps = 90/333 (27%)

Query: 91  GKVFSWGR----------GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
           G V+ WG             S         D L PKP+         +++++ G  H+  
Sbjct: 243 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLE--SNVMLDVSYVACGVKHAAL 300

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V+    +FT G+   G+LGHG   S   P  V S    NV  IACG  H+  +     G+
Sbjct: 301 VTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAIT--ATGD 358

Query: 201 -QVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
              +G G+   G LG    VS    + VS P     L  +++  +S     +A +++ G 
Sbjct: 359 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSGP-----LEGLQVSAVSCGTWHTALITSSGK 413

Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           LYT+                                    GDG   +LG  +   +S P+
Sbjct: 414 LYTF------------------------------------GDGTFGVLGHGNRETISYPK 437

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
            V S             L G++ I ++ G  H+A V      V + +          F  
Sbjct: 438 EVES-------------LKGLRTISVSCGVWHTAAV------VEVIMAQSNTSSGKLF-- 476

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                    TWG G+  +LG G+   ++ P  V
Sbjct: 477 ---------TWGDGDKYRLGHGDRSSKLKPTCV 500



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  +V++WG G +G+LG G + D  +P  +      SV  +ACG     A+    SV G
Sbjct: 575 QSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSG 633


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 176/415 (42%), Gaps = 62/415 (14%)

Query: 8   ETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS 67
           ET++    +I+    ++   E+   V   ++WG GT G LG G    E SP+++      
Sbjct: 136 ETDQKLQVVIDKGSTRVLIREDASDV---YTWGEGTRGMLGHGEEDPEASPRVVEALLGH 192

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
            + ML  G  H +AL      + G+V+SWG G  G+LG G   D   P  +    G  + 
Sbjct: 193 DIKMLCLGSGHTMAL-----AVSGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRG--FD 245

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACG 186
           ITHI+   NHS  V+D+G  +  G G  G LG  GD   H SP ++ +   K V   ACG
Sbjct: 246 ITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGD--KHVSPTQIHALDGKRVVHAACG 303

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
              +L +++     +VY  G+ + GQLG+  +   ++S P +   L +  IV I+     
Sbjct: 304 AAFTLFVIES---GEVYACGNNEHGQLGIGSNE--AMSEPTLVTNLPE-RIVRIACGNSH 357

Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS------------FSQAALGWNHVLVL 294
           + ALS  G LY WG   +S+  +   + L   LS             +  A G NH ++L
Sbjct: 358 AVALSETGRLYAWG--AHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIIL 415

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           +  G +   G    G L      +  +    AL    N +G K   I+ G + SA V+ +
Sbjct: 416 SNSGLLYAFGSGAQGQLGLGPLATKNQATPAAL---PNPEGRKYTAISCGQDISAAVSDR 472

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                                       I TWG G    LGL +   +  P ++ 
Sbjct: 473 GK--------------------------IYTWGSGASNALGLPDGRTKYAPTLIE 501



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WGA + GQLG G  L D LSP  +  + +   V+  ACGG H + L++      G 
Sbjct: 366 RLYAWGAHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSN-----SGL 420

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++++G G+ GQLG G +       P    +      T IS G + S  VSD G ++T G 
Sbjct: 421 LYAFGSGAQGQLGLGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGS 480

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           G    LG  D R+  +P  + S  +K    +ACG  H
Sbjct: 481 GASNALGLPDGRTKYAPTLIESMADKRCRTVACGFFH 517



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           D+  ++T G+GT G LGHG+    +SP  V + +  ++  +  G  H++ L    +  +V
Sbjct: 157 DASDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMAL---AVSGEV 213

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           Y +G G  G+LG  ++R R    P    GL   +I  I+ N + S A++  G  Y WGRG
Sbjct: 214 YSWGLGLGGRLGQGRERDRFT--PLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRG 271

Query: 263 FNSTSDVNCPQSL-PSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
            + +  V   + + P+ +          AA G    L +   GEV   G + HG L    
Sbjct: 272 IDGSLGVEGDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGS 331

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
             + + P       V+NL   ++++IA G  H+                           
Sbjct: 332 NEAMSEPT-----LVTNLPE-RIVRIACGNSHAVA------------------------- 360

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            ++E   +  WG    GQLG+G    D++ P  V   +    RD   +  CG   T  +S
Sbjct: 361 -LSETGRLYAWGAHSSGQLGVGEPLEDRLSPVRV---ESNVVRDDVADFACGGNHTIILS 416


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 179/415 (43%), Gaps = 79/415 (19%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  S++  V  +A G  H+   T       G VF+WG+ S G+LGHG   D  
Sbjct: 185 DVLIPKALE-SNVLDVCHIATGAHHIAIATR-----QGHVFTWGQESGGRLGHGIDKDFS 238

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            P  V F +G+ +    ++ G  H+  +S S  L+T GDGT   G LGHG   SH  P  
Sbjct: 239 SPVLVEFLEGNNFEF--VACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKM 296

Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP---Q 227
           V+       V  IACG  HS +   +    +++ FG G  G LG       SV  P   Q
Sbjct: 297 VNGPLEGLQVVSIACGTWHSALATSN---GKLFTFGDGAFGVLGHGDQE--SVWYPKEVQ 351

Query: 228 VTIGLHDIEIV-------GISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQ 273
           +  GL  I++         I     +S + S+   L+TWG G        N  + +   +
Sbjct: 352 LLTGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTR 411

Query: 274 SLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
             P    +F Q   G N  + LT  G V  +GG+ HG L +P          ++L K+  
Sbjct: 412 VAPLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNP----------MSLGKIPT 461

Query: 333 LDGVKVI-----QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
           L   K++     +I+ GA H A++T K                            I TWG
Sbjct: 462 LVQDKLLGEFVEKISCGAHHVAILTNK--------------------------SEIYTWG 495

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 442
            G +G+LG G+  D+  P +V      ++R+ +  V CGS FT  I  H   S+T
Sbjct: 496 MGANGRLGHGDVEDRKSPTLVVA---LKDRNIK-NVSCGSNFTSCICVHKWVSET 546



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 12/221 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHV-----LALTSPSSVI 89
           K++++G G  G LG G       P+ + L +      +ACG  H      +A  S S+  
Sbjct: 324 KLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTIKVACGVWHTAAIIEVAFQSGSNSS 383

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
             K+F+WG G   +LGHG     L P  V       Y    +  G N +  ++ SG +FT
Sbjct: 384 SWKLFTWGDGDMHRLGHGNKETYLQPTRVAPL--MEYNFHQVECGHNMTIALTTSGHVFT 441

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G    GQLG+         +     + + V +I+CG  H  +L      +++Y +G G 
Sbjct: 442 MGGTEHGQLGNPMSLGKIPTLVQDKLLGEFVEKISCGAHHVAILTNK---SEIYTWGMGA 498

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
            G+LG     +     P + + L D  I  +S   + ++ +
Sbjct: 499 NGRLG--HGDVEDRKSPTLVVALKDRNIKNVSCGSNFTSCI 537



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 16/190 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  +      +   + CG    +ALT+      G VF
Sbjct: 386 KLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNFHQVECGHNMTIALTT-----SGHVF 440

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G    GQLG+    G++   +  K +  F      +  IS G +H   +++   ++T 
Sbjct: 441 TMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF------VEKISCGAHHVAILTNKSEIYTW 494

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH-SLVLLKDCLGNQVYGFGSGK 209
           G G  G+LGHGD     SP  V +  ++N+  ++CG    S + +   +        +G 
Sbjct: 495 GMGANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGSNFTSCICVHKWVSETDQSIYNGF 554

Query: 210 RGQLGVSKDR 219
           R   G++K R
Sbjct: 555 RQAFGLTKKR 564



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 11/156 (7%)

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
            D L PK +   + +   + HI+ G +H    +  G +FT G  + G+LGHG  +  SSP
Sbjct: 184 TDVLIPKAL---ESNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSP 240

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVSLPQ 227
           V V      N   +ACG  H+  L K     ++Y +G G    G LG   +   S  +P+
Sbjct: 241 VLVEFLEGNNFEFVACGEYHTSALSKSF---ELYTWGDGTHNVGLLGHGSE--ASHWIPK 295

Query: 228 VTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           +  G L  +++V I+     SA  ++ G L+T+G G
Sbjct: 296 MVNGPLEGLQVVSIACGTWHSALATSNGKLFTFGDG 331


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GRL   + +PQ +   S   +  ++ G AH +AL+     + G V
Sbjct: 169 ELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALS-----MSGNV 223

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWGR   GQLG G      +P  +   D  +  +  ++ G +H+  ++  G +FT G G
Sbjct: 224 YSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ--VEFLACGGSHTALLTTDGLVFTFGAG 281

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH   ++   P  V+      V QIACG RH+L  + D LG +V+ FGSGK GQL
Sbjct: 282 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSD-LG-KVFSFGSGKEGQL 339

Query: 214 GVSKDRIRSVSLP 226
           G      + + LP
Sbjct: 340 GNGGTHNQLIPLP 352



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 38/259 (14%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
            S+  +ACG  H LAL+      GG++F+WG+   GQLG G +  ++  P+ V    G  
Sbjct: 149 KSIIQIACGDYHSLALSK-----GGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSG-- 201

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG  HS  +S SG +++ G    GQLG G       P  + +  N+ V  +AC
Sbjct: 202 VPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLAC 261

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  H+ +L  D L   V+ FG+GK GQLG   +++ +R    P++   L    +  I+  
Sbjct: 262 GGSHTALLTTDGL---VFTFGAGKYGQLGHNSTQNELR----PRLVTELAGNRVTQIACG 314

Query: 244 GDRSAALSAE-GHLYTWGRGFN--------STSDVNCPQSLPSS--LSFSQAALGWNHVL 292
              + A  ++ G ++++G G              +  P  LPS+  L F           
Sbjct: 315 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESR-------- 366

Query: 293 VLTGDGEVLMLGGSHHGML 311
             T D E++M+ G +  +L
Sbjct: 367 --TSDKELVMIAGGNQSVL 383



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 118/264 (44%), Gaps = 48/264 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K++ QIACG  HSL L K   G +++ +G    GQLGV +    S+  PQ    L  + +
Sbjct: 149 KSIIQIACGDYHSLALSK---GGELFAWGQNLHGQLGVGR-LFASIPTPQAVEHLSGVPL 204

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
           V ISA    S ALS  G++Y+WGR      G   T   + P SL  +L   Q    A G 
Sbjct: 205 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFP-SLIETLDNQQVEFLACGG 263

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG V   G   +G L      +  RP       V+ L G +V QIA G  H+
Sbjct: 264 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRP-----RLVTELAGNRVTQIACGRRHT 318

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T +Q+ P  +
Sbjct: 319 -------------------------LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 353

Query: 409 NLGD----EFQNRDTQLEVFCGSG 428
            L      +F++R +  E+   +G
Sbjct: 354 KLPSNEELKFESRTSDKELVMIAG 377



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG     +EL P+L+   + + V+ +ACG  H LA  S      GKVFS
Sbjct: 275 VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL----GKVFS 330

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTF 120
           +G G  GQLG+G   + L P P+  
Sbjct: 331 FGSGKEGQLGNGGTHNQLIPLPMKL 355



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 103/267 (38%), Gaps = 69/267 (25%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +H +  G  H L+L  D           GK  +   S +  R   +      L +  I+
Sbjct: 110 KIHSVDQGAEHMLILSSD-----------GKPFEYNYSIEHARFQCI------LQEKSII 152

Query: 239 GISANGDRSAALSAEGHLYTWGRGFNST-------SDVNCPQSLP--SSLSFSQAALGWN 289
            I+     S ALS  G L+ WG+  +         + +  PQ++   S +   Q + G  
Sbjct: 153 QIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKA 212

Query: 290 HVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
           H + L+  G V   G +  G L    +D E   S          +  LD  +V  +A G 
Sbjct: 213 HSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSL---------IETLDNQQVEFLACGG 263

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            H+A++T                           +  + T+G G++GQLG  +T +++ P
Sbjct: 264 SHTALLTT--------------------------DGLVFTFGAGKYGQLGHNSTQNELRP 297

Query: 406 KVVNLGDEFQNRDTQLEVFCGSGFTYA 432
           ++V   +   NR TQ+   CG   T A
Sbjct: 298 RLVT--ELAGNRVTQIA--CGRRHTLA 320


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G   D   P+L++  S  ++ ++ACG  H  A+T     + G ++
Sbjct: 130 EIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVT-----LSGDLY 184

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  V    PK V    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 185 TWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG--IHVSSISCGPWHTALVTSAGQLFTFG 242

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD  S S P +V S       + ACG+ H+  +++   GN         ++
Sbjct: 243 DGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKI 302

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG      + V  P     L +     ++     + AL+  GH+YT G  
Sbjct: 303 FTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSA 360

Query: 263 F-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                 N+ +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 361 VYGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 417



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 178/407 (43%), Gaps = 72/407 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  +    V  ++CGG H   +T       G+++SWG  S G+LGHG   D  
Sbjct: 97  DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQ-----GEIYSWGEESGGRLGHGVDCDVS 151

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
            PK +         I  ++ G  H+  V+ SG L+T GDGT  FG LGHG+  SH  P  
Sbjct: 152 QPKLIDALS--HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKH 209

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  +   +V  I+CG  H+ ++       Q++ FG G  G LG   DR  S+S+P+   
Sbjct: 210 VNGPLEGIHVSSISCGPWHTALVTS---AGQLFTFGDGSFGVLG-HGDR-ESISVPREVE 264

Query: 231 GL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST-----SDVNCP 272
            L             H   +V + A G+ S++  + G ++TWG G          +    
Sbjct: 265 SLKGLRTVRAACGVWHTAAVVEVMA-GNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV 323

Query: 273 QSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
            +  ++L   +F Q A G    + LT  G V  +G + +G L + +      P+ V  + 
Sbjct: 324 PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQ-ADGMLPVRVEGKL 382

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
             N     V +I+ GA H AV+T +                            + TWG G
Sbjct: 383 HKNF----VEEISCGAYHVAVLTSRTE--------------------------VYTWGKG 412

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
            +G+LG G+T D+  P +V    + Q R     V CG  FT AI  H
Sbjct: 413 ANGRLGHGDTDDKNTPTLVEALKDKQVR----SVVCGINFTAAICIH 455



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 18/191 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G    +L P  +      +   +ACG    +ALT+      G V+
Sbjct: 301 KIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 355

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 356 TMGSAVYGQLGNTQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 411

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG----SG 208
           G  G+LGHGD    ++P  V +  +K V  + CG+  +  +   C+   V G      SG
Sbjct: 412 GANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGVDQSMCSG 468

Query: 209 KRGQLGVSKDR 219
            R    + + R
Sbjct: 469 CRQPFNLRRKR 479


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG G++ D  + PQ++   S   ++ ++ G +H +AL+     + G +
Sbjct: 56  ELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALS-----VSGNI 110

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWGR   GQLG G   D  +P  +   +  +  +  ++ G +H+  ++  G +FT G G
Sbjct: 111 YSWGRNDFGQLGLGHTDDKDFPSLIEALENQK--VEFLACGGSHTALLTKDGLVFTFGAG 168

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH   ++   P  V+      V Q+ACG +H+L  + D LG +V+ FGSG+ GQL
Sbjct: 169 KYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSD-LG-KVFSFGSGEEGQL 226

Query: 214 GVSKDRIRSVSLP 226
           G      + + LP
Sbjct: 227 GNGGTHNQLIPLP 239



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 48/264 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           KN+ QI CG  HSL L K   G +++ +G    GQLGV K    S + PQ+   L  + +
Sbjct: 36  KNIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGK-IFDSTTAPQIVEHLSGVPL 91

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WGR      G   T D + P SL  +L   +    A G 
Sbjct: 92  AQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFP-SLIEALENQKVEFLACGG 150

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG V   G   +G L      +  RP       V+ L G +V Q+A G +H+
Sbjct: 151 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCL-----VTKLAGNRVTQVACGRQHT 205

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G GE GQLG G T +Q+ P  +
Sbjct: 206 -------------------------LAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPM 240

Query: 409 NLGD----EFQNRDTQLEVFCGSG 428
            L      +F+NR ++ E+   +G
Sbjct: 241 KLPSNEELKFENRTSEKELIIIAG 264



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 11/149 (7%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHR 125
            ++  + CG  H LAL+      GG++F+WG+   GQLG G++ D+   P+ V    G  
Sbjct: 36  KNIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSG-- 88

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG +HS  +S SG +++ G   FGQLG G       P  + +  N+ V  +AC
Sbjct: 89  VPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLAC 148

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           G  H+ +L KD L   V+ FG+GK GQLG
Sbjct: 149 GGSHTALLTKDGL---VFTFGAGKYGQLG 174



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG     +EL P L+   + + V+ +ACG  H LA  S      GKVFS
Sbjct: 162 VFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDL----GKVFS 217

Query: 96  WGRGSSGQLGHGEMVDALYPKPV 118
           +G G  GQLG+G   + L P P+
Sbjct: 218 FGSGEEGQLGNGGTHNQLIPLPM 240


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 181/437 (41%), Gaps = 103/437 (23%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG G  G+LG G L  + SP   +      +  +ACGGAH L LT       G+V++ G 
Sbjct: 102 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTES-----GRVYATGL 156

Query: 99  GSSGQLG-------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            + GQLG         E V+   PK             HISAG+NHS  V+  G L+  G
Sbjct: 157 NNFGQLGISDEKRFSTEPVEVRIPKEA----------MHISAGYNHSCVVTADGELYMWG 206

Query: 152 DGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
             + GQLG G   + +   P KV S     + + A G  HS+ +     G +V+ +G G+
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD---GGEVFSWGDGR 263

Query: 210 RGQLGVSKDR-----IRSVS--LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
            G+LG   +      ++S S   P++   L  I++  ++A    SA +   G +Y +G  
Sbjct: 264 SGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGER 323

Query: 262 -----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--- 313
                 F   +    P  + + L   + A G  H  VLT  G++   G + +G L +   
Sbjct: 324 ATNRVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGST 383

Query: 314 -----PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
                PERV    P S +           V +++ G +H+A ++G               
Sbjct: 384 SVSHLPERVEG--PFSKS----------PVSKVSCGWKHTAAISGG-------------- 417

Query: 369 FPPFFINVIAENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                        AI TWGWG              GQLG G+  D + P  ++LG+  + 
Sbjct: 418 -------------AIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVK- 463

Query: 417 RDTQLEVFCGSGFTYAI 433
               ++V CG   T AI
Sbjct: 464 ---VVQVSCGFNHTGAI 477



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 25/239 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           +++ WG  ++GQLG G+   +       + SL  + +   A G  H +A+       GG+
Sbjct: 201 ELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD-----GGE 255

Query: 93  VFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           VFSWG G SG+LGHG     L          P+ +   +G +  + H++AG  HS  V +
Sbjct: 256 VFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIK--VKHVAAGMLHSACVDE 313

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +G ++  G+    ++  G+    ++P  +S+ +  +  ++ACG  H+ VL K   G  +Y
Sbjct: 314 NGAVYIFGERATNRVSFGEANKATTPSLISTLL--DCEEVACGGYHTCVLTK---GGDLY 368

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            +GS + G LG     +    LP+   G      V   + G +  A  + G ++TWG G
Sbjct: 369 SWGSNENGCLGNGSTSVS--HLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWG 425



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 25/174 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ +G     ++  G  +   +P L+  S+L     +ACGG H   LT      GG ++S
Sbjct: 317 VYIFGERATNRVSFGEANKATTPSLI--STLLDCEEVACGGYHTCVLTK-----GGDLYS 369

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCG-- 151
           WG   +G LG+G    +  P+ V   +G   +  ++ +S GW H+  +S  G +FT G  
Sbjct: 370 WGSNENGCLGNGSTSVSHLPERV---EGPFSKSPVSKVSCGWKHTAAIS-GGAIFTWGWG 425

Query: 152 --DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
              GTF        GQLGHG    +  P K+    N  V Q++CG  H+  +L+
Sbjct: 426 GSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAILE 479


>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Anolis carolinensis]
          Length = 409

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 177/439 (40%), Gaps = 76/439 (17%)

Query: 26  EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALT 83
           E   E     +++WGA + GQLG G   D   PQ+L   L +  +V  +  GG H   LT
Sbjct: 2   EVPREAPAQALFTWGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLT 61

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
                  G++F  G+  +GQLG G   D  + K  +   G   ++  ++ GW+ +  ++ 
Sbjct: 62  DT-----GELFLCGQNKNGQLGLGHTEDVTHFKLCSSLCG--CSVIQVACGWDFTIILAG 114

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           SG +F+CG  +FGQLG       S+  K    + + V  +A G+RH+L + ++     V+
Sbjct: 115 SGQVFSCGSNSFGQLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHALAVTEN---GSVF 171

Query: 204 GFGSG-----KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
            +G G     KR   G           P    GL D  +  +++    + AL+ EG LY 
Sbjct: 172 QWGIGMSSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYV 231

Query: 259 WGRG-----FNSTSDVNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           WG        N    V  PQ + +         +   GW H++  T  G+V   G + +G
Sbjct: 232 WGNNKHKQLVNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYG 291

Query: 310 ML--------------SDPERVSSTRPL-SVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            L                 +  S   PL S AL  V  L G    QIA G+EH+  + G 
Sbjct: 292 QLGRSGLPYEQMGQDGKASDENSVKEPLHSPAL--VPALTGAS--QIACGSEHNLAIVGG 347

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                                         +WGW EHG  G G   +   P+ +++    
Sbjct: 348 ---------------------------QCFSWGWNEHGMCGNGTEANVCAPQPLDV---- 376

Query: 415 QNRDTQLEVFCGSGFTYAI 433
            +    L V CG+G + A 
Sbjct: 377 LSSAKLLYVGCGAGHSMAF 395


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 29/324 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG+   G+LG G + DE    P+ ++ +  + V  +ACG  + + +T+      G+V
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITN-----DGQV 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +S G    GQLGH +    L   P        +    I+ G  H+  V++ G LF+ G  
Sbjct: 56  YSCGNNDYGQLGHEKARKRLQLIP----GLDAFVFKKIACGSCHTLAVNEWGQLFSWGCN 111

Query: 154 TFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQLG      +  +P  V +     + QIACG+ HS+ L  D    ++Y +GS + GQ
Sbjct: 112 MKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTND---GELYSWGSNREGQ 168

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+    +  +  P+  I L  + I  I+  G  +  +S  G ++ WGR      G N T
Sbjct: 169 LGIGSHTVTEIK-PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDT 227

Query: 267 SD--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               V C      +     AA G    + LT DG V   G   +G L     ++   P  
Sbjct: 228 QQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILP-- 285

Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
               +V  L G  V QI+ G  H+
Sbjct: 286 ---RQVMELMGSTVTQISCGKRHT 306



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG+  +GQLG G     E+ P+ +   +   ++ +ACGG H + ++       G V
Sbjct: 157 ELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISK-----SGVV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WGR + GQLG  +    + P  +      +  + + + G   S F++  G +FTCG G
Sbjct: 212 FAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAK--VCYAACGEEFSVFLTLDGGVFTCGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG+  +   P +V   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 270 MYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 327

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G      RS + P V +G
Sbjct: 328 GNRAS--RSATTPLVVLG 343



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 15/231 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG    GQLG   +   E +P+++     S +  +ACG  H +ALT+      G++
Sbjct: 104 QLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN-----DGEL 158

Query: 94  FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +SWG    GQLG G   V  + PK +         I  I+ G  H+  +S SG +F  G 
Sbjct: 159 YSWGSNREGQLGIGSHTVTEIKPKRIITLAA--VPIAFIACGGYHTVVISKSGVVFAWGR 216

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            TFGQLG  D +    P ++ +  N  V   ACG   S+ L  D     V+  G+G  GQ
Sbjct: 217 NTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLD---GGVFTCGAGMYGQ 273

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRG 262
           LG       +  LP+  + L    +  IS     + AL  + G +Y WG G
Sbjct: 274 LGHGNG--MNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLG 322



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 107/270 (39%), Gaps = 48/270 (17%)

Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           +F  G    G+LG G     +   P +V       V QIACG  +++ +  D    QVY 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITND---GQVYS 57

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---R 261
            G+   GQLG  K R R   +P    GL       I+     + A++  G L++WG   +
Sbjct: 58  CGNNDYGQLGHEKARKRLQLIP----GLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMK 113

Query: 262 GFNSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           G    + V+C +  P  +         Q A G  H + LT DGE+   G +  G L    
Sbjct: 114 GQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLG--- 170

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
            + S     +  +++  L  V +  IA G  H+ V                         
Sbjct: 171 -IGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVV------------------------- 204

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            I+++  +  WG    GQLGL +T  +I P
Sbjct: 205 -ISKSGVVFAWGRNTFGQLGLNDTQQRIVP 233



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 131/302 (43%), Gaps = 25/302 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G    GQLG  +    L  QL+          +ACG  H LA+        G++F
Sbjct: 54  QVYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVFKKIACGSCHTLAVNE-----WGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG    GQLG    VD     P          I  I+ G  HS  +++ G L++ G   
Sbjct: 107 SWGCNMKGQLGLNS-VDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNR 165

Query: 155 FGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G +  +   P ++ +     +  IACG  H++V+ K  +   V+ +G    GQL
Sbjct: 166 EGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGV---VFAWGRNTFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NST 266
           G++  + R V  P     L + ++   +   + S  L+ +G ++T G G        N  
Sbjct: 223 GLNDTQQRIV--PCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGM 280

Query: 267 SDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           +++  P+ +   +  + +Q + G  H L L    G V   G    G L +    S+T PL
Sbjct: 281 NEI-LPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPL 339

Query: 324 SV 325
            V
Sbjct: 340 VV 341


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 163/381 (42%), Gaps = 54/381 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  + P+  +     +V  + CG  H   +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G +F+ G    G
Sbjct: 59  GCNDLGQLGHDKSRKK--PEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAAHG 114

Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           Q+G      +   P  + S  +  + Q+ACG  HSL L K+   + +Y +G  + GQLG+
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKE---SNIYSWGQNQYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             ++ R  S P+    L  I    I+A G  S AL+  G ++ WGR      G N  +D 
Sbjct: 172 GSEK-RKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           + P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 SDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H+              +++ P            +  I ++G
Sbjct: 286 RKVFELMGNIVTQIACGRQHT--------------LAFVP-----------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG+G+T ++  P +V
Sbjct: 321 LGGNGQLGIGSTSNKKSPSMV 341



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   + P+   FF      +  +  G  H+GFV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--NVRDVGCGNRHTGFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   + +  ++CG  H+L L       QV+ +G    
Sbjct: 59  GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDK---GQVFSWGHAAH 113

Query: 211 GQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
           GQ+GVS  +D IR   +P+    L DI+IV ++     S ALS E ++Y+WG+      G
Sbjct: 114 GQIGVSIAEDYIR---VPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLG 170

Query: 263 FNSTS-DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             S     + P+ +   S + F+  A G  H   LT  G +   G +  G L   +    
Sbjct: 171 LGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
           + P   AL K  +L   K+I I  G +H+A +T                          +
Sbjct: 231 SDP---ALLK--SLRSQKIIYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +   +++P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSASHEVNPRKV 288



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 14/183 (7%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           ++SWG    GQLG G     E +P+  ++ SLS +    +A GG H  ALT     I G 
Sbjct: 158 IYSWGQNQYGQLGLGSEKRKESAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G 
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQK--IIYICCGEDHTAALTKEGGVFTFGA 268

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH       +P KV   +   V QIACG +H+L  +      ++Y FG G  GQ
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326

Query: 213 LGV 215
           LG+
Sbjct: 327 LGI 329



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQ+G     D +  P+  N+ SLS + +  +ACG  H LAL+  S+    
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPR--NIKSLSDIQIVQVACGHHHSLALSKESN---- 157

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            ++SWG+   GQLG G E      P+ +    G      HI+AG  HS  ++ SG +F  
Sbjct: 158 -IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSG--IPFAHIAAGGGHSFALTISGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D    S P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 134/304 (44%), Gaps = 29/304 (9%)

Query: 57  SPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY 114
           SP LL       +  +A   GG H LAL+S      G+VFSWG    G+LGHG       
Sbjct: 377 SPTLLESIQHVHIKKVAVNSGGKHCLALSSE-----GEVFSWGEAEDGKLGHGNRNSCDR 431

Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS 174
           P+ +    G    +  I+AG  HS  ++ +G LFT G G +G+LGHGD      P  V +
Sbjct: 432 PRVIESLRGKE--VVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEA 489

Query: 175 FVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
                V  +ACG     +L +  D   + V+ +G G  G+LG  +       +PQ    L
Sbjct: 490 LKGVRVIDVACGSGDAQTLCITDD---DSVWSWGDGDYGKLG--RGGSDGCKIPQKVEAL 544

Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQA 284
               +V +      S AL+  G +YTWG+G        S   V  P+ + +    +    
Sbjct: 545 IGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISI 604

Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
           A G  H +  T  GEV   G +  G L D    +  RP  VA      L G K+ ++A G
Sbjct: 605 ATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVA-----ALQGKKINRVACG 659

Query: 345 AEHS 348
           + HS
Sbjct: 660 SAHS 663



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 12/227 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG   DG+LG G  +    P+++       V  +A GGAH   +TS      G++F
Sbjct: 409 EVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITS-----TGELF 463

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+G  G+LGHG+  D + PK V    G R       +G   +  ++D   +++ GDG 
Sbjct: 464 TWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGD 523

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P KV + + + V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 524 YGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTK---SGCVYTWGKGDYHRLG 580

Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             S D +R    P+    L    ++ I+       A + +G ++TWG
Sbjct: 581 HGSDDHVRR---PRKVAALQGKNVISIATGSLHCVACTDQGEVFTWG 624



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 7/156 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG G  G+LG G       PQ +       V  + CG    +ALT       G V++
Sbjct: 516 VWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTK-----SGCVYT 570

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G   +LGHG       P+ V    G    +  I+ G  H    +D G +FT GD   
Sbjct: 571 WGKGDYHRLGHGSDDHVRRPRKVAALQGK--NVISIATGSLHCVACTDQGEVFTWGDNDE 628

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           GQLG G   +   P  V++   K ++++ACG  HSL
Sbjct: 629 GQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSL 664



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 45/234 (19%)

Query: 201 QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYT 258
           Q++G+G   RGQLG V   +++  +       L  ++++G    G+++  A+ A G+   
Sbjct: 309 QIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIG----GEQTLFAVYATGYGAG 364

Query: 259 WGRGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
              G   T  V+ P  L S   +   + A+  G  H L L+ +GEV   G +  G L   
Sbjct: 365 GRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHG 424

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
            R S  RP       + +L G +V+ IAAG  HSA +T                      
Sbjct: 425 NRNSCDRP-----RVIESLRGKEVVDIAAGGAHSACITS--------------------- 458

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                   + TWG G +G+LG G++ DQ+ PK+V    E       ++V CGSG
Sbjct: 459 -----TGELFTWGKGRYGRLGHGDSEDQMKPKLV----EALKGVRVIDVACGSG 503



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 151/403 (37%), Gaps = 102/403 (25%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYP---------KPVTFFDGHRY--------------- 126
           G+++ WG    GQLG  E      P         +PV    G +                
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVYATGYGAGGRL 367

Query: 127 ---------------TITH-------ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
                          +I H       +++G  H   +S  G +F+ G+   G+LGHG+  
Sbjct: 368 GIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRN 427

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRS 222
           S   P  + S   K V  IA G  HS  +       +++ +G G+ G+L  G S+D+++ 
Sbjct: 428 SCDRPRVIESLRGKEVVDIAAGGAHSACITST---GELFTWGKGRYGRLGHGDSEDQMK- 483

Query: 223 VSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGR------GFNSTSDVNCPQS 274
              P++   L  + ++ ++  +GD ++  ++ +  +++WG       G   +     PQ 
Sbjct: 484 ---PKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQK 540

Query: 275 LPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
           + + +     +   G    + LT  G V   G   +  L         RP      KV+ 
Sbjct: 541 VEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRP-----RKVAA 595

Query: 333 LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHG 392
           L G  VI IA G+ H    T                          +   + TWG  + G
Sbjct: 596 LQGKNVISIATGSLHCVACT--------------------------DQGEVFTWGDNDEG 629

Query: 393 QLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 434
           QLG G+T     P++V  L  +  NR     V CGS  + A S
Sbjct: 630 QLGDGSTSAIPRPRLVAALQGKKINR-----VACGSAHSLAWS 667



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG   +GQLG G       P+L+       ++ +ACG AH LA ++   V  GK+
Sbjct: 619 EVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSLAWSTSKPVNAGKL 677


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 163/376 (43%), Gaps = 59/376 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WGA  +GQLG     +  +P  + +S L+ V  +A G  H +AL S      G V++
Sbjct: 164 VWTWGANWNGQLGDESTTNRSTP--VQVSGLTDVIAIAGGAYHTIALKSD-----GTVWA 216

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G   D   P  V+        +  I+ G+ H+  +   G ++  GD   
Sbjct: 217 WGNNEGGQLGDGSTTDRSTPVQVSGLT----DVIAIAGGYAHTIALKSDGTVWAWGDNEG 272

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G   + S PVKV      +V  IA G  H++ L  D     V+ +G  + GQLG 
Sbjct: 273 GRLGDGSTTNRSIPVKVGGL--SDVIAIAGGNAHTIALKSD---GTVWAWGDNEGGQLGD 327

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                RS   P    GL D  ++ I+     +  L ++G ++TWG       G  ST++ 
Sbjct: 328 GSTTNRST--PVKVSGLAD--VIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNR 383

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           + P  +         A G  H + +  DG +   G + +G L D   ++S+ P+     +
Sbjct: 384 STPVQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPV-----Q 438

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           V+ L    VI IA G  H+                            +  + A+ TWG+ 
Sbjct: 439 VNGL--TDVIAIAGGYYHTI--------------------------AMKSDGAVWTWGFN 470

Query: 390 EHGQLGLGNTCDQIHP 405
            +GQLG G+  ++  P
Sbjct: 471 YYGQLGDGSITNRSTP 486



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 160/377 (42%), Gaps = 59/377 (15%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
             VW+ GA  +GQLG G   +  +P  + +S L+ V  +A G  H +AL S ++V     +
Sbjct: 1059 TVWACGANWNGQLGDGTTINRSTP--VQVSGLTDVIAIAGGDYHTIALKSDNTV-----W 1111

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG  S GQLG G + +   P PVT+       I  I+ G+ H+  +   G ++  G   
Sbjct: 1112 AWGSNSYGQLGDGTITNRSIPTPVTYLT----NIIAIAGGYVHTIALKSDGTVWAWGYNG 1167

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +GQLG G   + S+PV+VS     +V  IA    H++ L  D     V+ +G    GQLG
Sbjct: 1168 YGQLGDGSTTNRSTPVQVSGL--TDVIAIAGEYVHTVALKSD---GTVWAWGYNGYGQLG 1222

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                  RS   P    GL D  ++ I+     + AL ++G ++TWG       G  +T +
Sbjct: 1223 DGSTTNRST--PVQVSGLTD--VIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTIN 1278

Query: 269  VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
               P  +         A G  H + L  D  V   G + +G L D   ++   P      
Sbjct: 1279 RLTPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTP------ 1332

Query: 329  KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
                      +Q++   +  A+  G +H + L                   +  +  WG 
Sbjct: 1333 ----------VQVSGLTDAIAIAGGDYHTIAL-----------------KSDNTVWAWGS 1365

Query: 389  GEHGQLGLGNTCDQIHP 405
              +GQLG  +T + + P
Sbjct: 1366 NSYGQLGDVSTANSLTP 1382



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 26/295 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G   +  +P  + +  L+ V  +A G  H +AL S      G V+
Sbjct: 661 TVWTWGWNNSGQLGDGTTINRSTP--VQVIGLTDVIAIAGGDYHTIALKSD-----GTVW 713

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G   +   P  V         I  I+ G+ HS  +   G ++  G   
Sbjct: 714 TWGFNYYGQLGGGATTNRSTPVQVKGLA----DIIAIAGGYVHSIALKSDGTVWAWGYNG 769

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G    H +PV+VS     ++  IA G  H++ L  D     V+ +G  + GQLG
Sbjct: 770 YGQLGDGSTTDHLTPVQVSGL--TDIIAIAGGYIHTIALKSD---GTVWAWGHNEGGQLG 824

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                  + S P    GL D  ++ ++A    + AL ++G ++TWGR      G  ST++
Sbjct: 825 --DGTTTNSSTPVQVSGLTD--VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTE 880

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            + P  +         A G+ H + L  DG V   G + +  L +    +S+ P+
Sbjct: 881 RSLPVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPV 935



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 156/379 (41%), Gaps = 63/379 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW++GA  + QLG G   D  +P  + +S L+    +A G  H +AL S      G V+
Sbjct: 611 TVWAYGANWNSQLGDGSTTDSSTP--VQVSGLTDAIAIAGGVYHTIALKSD-----GTVW 663

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  +SGQLG G  ++   P  V         +  I+ G  H+  +   G ++T G   
Sbjct: 664 TWGWNNSGQLGDGTTINRSTPVQVIGLT----DVIAIAGGDYHTIALKSDGTVWTWGFNY 719

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G   + S+PV+V      ++  IA G  HS+ L  D     V+ +G    GQLG
Sbjct: 720 YGQLGGGATTNRSTPVQVKGL--ADIIAIAGGYVHSIALKSD---GTVWAWGYNGYGQLG 774

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
              + D +  V +  +T      +I+ I+     + AL ++G ++ WG       G  +T
Sbjct: 775 DGSTTDHLTPVQVSGLT------DIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTT 828

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           ++ + P  +              H + L  DG V   G + +G L D      + P+ V 
Sbjct: 829 TNSSTPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQV- 887

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
                 +    VI IA G  H+                            +  + A+  W
Sbjct: 888 ------IGLTDVIAIAGGYYHTIA--------------------------LKSDGAVWAW 915

Query: 387 GWGEHGQLGLGNTCDQIHP 405
           G+  + QLG  +T +   P
Sbjct: 916 GYNGNNQLGNWSTKNSSTP 934



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 123/293 (41%), Gaps = 49/293 (16%)

Query: 129  THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
            + ISAG  H+  +   G ++ CG    GQLG G   + S+PV+VS     +V  IA G  
Sbjct: 1042 SQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGL--TDVIAIAGGDY 1099

Query: 189  HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
            H++ L  D   N V+ +GS   GQLG      RS+  P   +      I+ I+     + 
Sbjct: 1100 HTIALKSD---NTVWAWGSNSYGQLGDGTITNRSIPTPVTYL----TNIIAIAGGYVHTI 1152

Query: 249  ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
            AL ++G ++ WG       G  ST++ + P  +         A  + H + L  DG V  
Sbjct: 1153 ALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSDGTVWA 1212

Query: 303  LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
             G + +G L D    + + P+     +VS L    VI IA G  H+              
Sbjct: 1213 WGYNGYGQLGDGSTTNRSTPV-----QVSGL--TDVIAIAGGYVHTI------------- 1252

Query: 363  ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEF 414
                          +  +  + TWGW   GQLG G T +++ P +V  L D  
Sbjct: 1253 -------------ALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDAI 1292



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 20/229 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    G+LG G   +   P  + +  LS V  +A G AH +AL S      G V+
Sbjct: 263 TVWAWGDNEGGRLGDGSTTNRSIP--VKVGGLSDVIAIAGGNAHTIALKSD-----GTVW 315

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G   +   P  V+        +  I+ G++H+  +   G ++T G   
Sbjct: 316 AWGDNEGGQLGDGSTTNRSTPVKVSGLA----DVIAIAGGYSHTIVLRSDGTVWTWGHNE 371

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   + S+PV+VS     +V  IA G+ H++ +  D     ++ +G    GQLG
Sbjct: 372 GGQLGDGSTTNRSTPVQVSGL--ADVIAIAGGVYHTIAVKSD---GTMWAWGYNWYGQLG 426

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
                I S +  QV  GL D  ++ I+     + A+ ++G ++TWG  +
Sbjct: 427 -DGTTINSSTPVQVN-GLTD--VIAIAGGYYHTIAMKSDGAVWTWGFNY 471



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 141/352 (40%), Gaps = 58/352 (16%)

Query: 70   SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
            S ++ G  H L L  P     G V++ G   +GQLG G  ++   P  V+        + 
Sbjct: 1042 SQISAGAYHTLTL-KPD----GTVWACGANWNGQLGDGTTINRSTPVQVSGLT----DVI 1092

Query: 130  HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
             I+ G  H+  +     ++  G  ++GQLG G   + S P  V+   N  +  IA G  H
Sbjct: 1093 AIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVH 1150

Query: 190  SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
            ++ L  D     V+ +G    GQLG      RS   P    GL D+  + I+     + A
Sbjct: 1151 TIALKSD---GTVWAWGYNGYGQLGDGSTTNRST--PVQVSGLTDV--IAIAGEYVHTVA 1203

Query: 250  LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
            L ++G ++ WG       G  ST++ + P  +         A G+ H + L  DG V   
Sbjct: 1204 LKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTW 1263

Query: 304  GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
            G ++ G L D   ++   P                +Q++   +  A+  G +H + L   
Sbjct: 1264 GWNNSGQLGDGTTINRLTP----------------VQVSGLTDAIAIAGGDYHTIAL--- 1304

Query: 364  SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEF 414
                            +  +  WG   +GQLG G T +++ P +V  L D  
Sbjct: 1305 --------------KSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTDAI 1342



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 176/438 (40%), Gaps = 70/438 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSP-------- 85
           VW+WG    GQLG G + +  +P   +LS + SV+   +  G A  ++L+S         
Sbjct: 464 VWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNG 523

Query: 86  SSVIGGKVFSWGRGS-------------SGQLGHGEMVDALYPKPVTF-----------F 121
           + V     F +G  +             +G    G  +  L P    +           +
Sbjct: 524 NGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIY 583

Query: 122 DGHRYTI---THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
            G   T    T ISAG  H+  +   G ++  G     QLG G     S+PV+VS   + 
Sbjct: 584 YGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDA 643

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
               IA G+ H++ L  D     V+ +G    GQLG      RS   P   IGL D+  +
Sbjct: 644 --IAIAGGVYHTIALKSD---GTVWTWGWNNSGQLGDGTTINRST--PVQVIGLTDV--I 694

Query: 239 GISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQAALGWNHVL 292
            I+     + AL ++G ++TWG  +       +T++ + P  +         A G+ H +
Sbjct: 695 AIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSI 754

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA-LEKVSNLDGVKVIQIAAGAEHSAVV 351
            L  DG V   G + +G L D        P+ V+ L  +  + G  +  IA  ++ +   
Sbjct: 755 ALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWA 814

Query: 352 TGKFHWVRL----FIISYTPFFPPFFINVIA------------ENRAIMTWGWGEHGQLG 395
            G     +L       S TP       +VIA             +  + TWG   +GQLG
Sbjct: 815 WGHNEGGQLGDGTTTNSSTPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLG 874

Query: 396 LGNTCDQIHP-KVVNLGD 412
            G+T ++  P +V+ L D
Sbjct: 875 DGSTTERSLPVQVIGLTD 892



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 123/291 (42%), Gaps = 49/291 (16%)

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
           + ISAG  H+  +   G ++T G    GQLG     + S+PV+VS     +V  IA G  
Sbjct: 146 SQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGL--TDVIAIAGGAY 203

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           H++ L  D     V+ +G+ + GQLG      RS   P    GL D  ++ I+     + 
Sbjct: 204 HTIALKSD---GTVWAWGNNEGGQLGDGSTTDRST--PVQVSGLTD--VIAIAGGYAHTI 256

Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
           AL ++G ++ WG       G  ST++ + P  +         A G  H + L  DG V  
Sbjct: 257 ALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHTIALKSDGTVWA 316

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
            G +  G L D    + + P+     KVS L    VI IA G  H+              
Sbjct: 317 WGDNEGGQLGDGSTTNRSTPV-----KVSGL--ADVIAIAGGYSHTI------------- 356

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGD 412
                        V+  +  + TWG  E GQLG G+T ++  P +V  L D
Sbjct: 357 -------------VLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD 394



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 155/394 (39%), Gaps = 45/394 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
             VW+WG    GQLG G   +  +P  + +S L+ V  +     H +AL S      G V+
Sbjct: 811  TVWAWGHNEGGQLGDGTTTNSSTP--VQVSGLTDVIAVTARLYHTIALKSD-----GTVW 863

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WGR   GQLG G   +   P  V         +  I+ G+ H+  +   G ++  G   
Sbjct: 864  TWGRNIYGQLGDGSTTERSLPVQVIGLT----DVIAIAGGYYHTIALKSDGAVWAWGYNG 919

Query: 155  FGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              QLG+   ++ S+PV+   + +N            + V L   L N   G+  G R   
Sbjct: 920  NNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLN---GWVDGNRAAT 976

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGRGFNSTSDVNCP 272
                D   S  +          +       G  SA +SA  G L  W   +   +  N  
Sbjct: 977  TAWFDYGTSSGVY--------FDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSR 1028

Query: 273  Q-SLPSSLSF---SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA-L 327
              S  S   F   SQ + G  H L L  DG V   G + +G L D   ++ + P+ V+ L
Sbjct: 1029 GISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGL 1088

Query: 328  EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT----PFFPPFFINVIA----- 378
              V  + G     IA  ++++    G   + +L   + T    P    +  N+IA     
Sbjct: 1089 TDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTNIIAIAGGY 1148

Query: 379  -------ENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                    +  +  WG+  +GQLG G+T ++  P
Sbjct: 1149 VHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTP 1182


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 160/377 (42%), Gaps = 59/377 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+   GQLG G   + L P  + +  LS V  +A G +H LA+ S      G V+
Sbjct: 166 TVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSGVVSVAAGSSHSLAVLSD-----GSVW 218

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  SSGQLG G  ++ L P  V    G        +    HS  V   G ++T G  +
Sbjct: 219 AWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAA----HSLAVRSDGTVWTWGANS 274

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG G       PV+V       V     G  HSL L  D     V+ +G    GQLG
Sbjct: 275 FGQLGDGTKSDRLVPVRVQGL--SGVVASDVGSYHSLALRSD---GSVWAWGHNSSGQLG 329

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
              D   S S+P    GL     + ++A    S A+ ++G ++ WG      RG  +T++
Sbjct: 330 --DDSSTSRSVPVQVRGLSG--GMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNN 385

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +         A G+NH L    DG V   G +  G L D    +ST P+     
Sbjct: 386 RASPVQVQGLGGGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPV----- 440

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L G  V+ +AAG +HS                            +  + ++  WG 
Sbjct: 441 QVQGLSG--VVAVAAGFDHSL--------------------------ALRSDGSVWAWGS 472

Query: 389 GEHGQLGLGNTCDQIHP 405
             +GQLG G T +++ P
Sbjct: 473 NAYGQLGEGTTTNRLVP 489



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 160/372 (43%), Gaps = 65/372 (17%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+   GQLG G   +  SP  + +  LS V  +A G  H LAL S      G V+
Sbjct: 416 SVWAWGSNDSGQLGDGTTRNSTSP--VQVQGLSGVVAVAAGFDHSLALRSD-----GSVW 468

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQLG G   + L P  V    G    +  ++AG NHS  V   G ++T G   
Sbjct: 469 AWGSNAYGQLGEGTTTNRLVP--VQVLSG----VVAVAAGSNHSLAVRSDGTVWTWGSNL 522

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G   +   PV+V       V  +A G  HSL +  D     V+ +GS   G+LG
Sbjct: 523 YGQLGDGTTSNRLVPVQVQGL--SGVAAVAAGSFHSLAVHSD---GSVWAWGSNSSGELG 577

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
              + +R+    +P ++ G      V ++A G  S  + ++G ++TWG       G  +T
Sbjct: 578 DGTTSNRLVPGRVPGLSGG------VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTT 631

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +  + P  +           G +H L +  DG V   G + +G L D      + P+   
Sbjct: 632 TSRSVPVQVQGLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPV--- 688

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L GV  + +A GA H                       P    V+  +  +  W
Sbjct: 689 --QVPGLSGV--VAMATGALH-----------------------PL---VVRSDGTVWAW 718

Query: 387 GWGEHGQLGLGN 398
           G+   GQLG G+
Sbjct: 719 GYNSFGQLGNGS 730



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 157/377 (41%), Gaps = 61/377 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG+   G+ G G  ++  SP  + +  L     +A G  H LA  S      G V+
Sbjct: 366 TVWAWGSNFSGERGEGTTNNRASP--VQVQGLGGGVAVAAGFNHSLAARSD-----GSVW 418

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG   SGQLG G   ++  P  V    G    +  ++AG++HS  +   G ++  G   
Sbjct: 419 AWGSNDSGQLGDGTTRNSTSPVQVQGLSG----VVAVAAGFDHSLALRSDGSVWAWGSNA 474

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G   +   PV+V S     V  +A G  HSL +  D     V+ +GS   GQLG
Sbjct: 475 YGQLGEGTTTNRLVPVQVLS----GVVAVAAGSNHSLAVRSD---GTVWTWGSNLYGQLG 527

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 R V  P    GL  +  V  +A    S A+ ++G ++ WG       G  +TS+
Sbjct: 528 DGTTSNRLV--PVQVQGLSGVAAV--AAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSN 583

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +P        A G  H LV+  DG V   G +  G L D    S + P+     
Sbjct: 584 RLVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPV----- 638

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L GV  + + AG  HS  V                            +  + TWG+
Sbjct: 639 QVQGLSGV--VAVDAGNSHSLAVR--------------------------SDGTVWTWGY 670

Query: 389 GEHGQLGLGNTCDQIHP 405
             +GQLG G T  +  P
Sbjct: 671 NSYGQLGDGTTTRRSVP 687



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 165/401 (41%), Gaps = 59/401 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WGA + GQLG G   D L P  + +  LS V     G  H LAL S      G V+
Sbjct: 266 TVWTWGANSFGQLGDGTKSDRLVP--VRVQGLSGVVASDVGSYHSLALRSD-----GSVW 318

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  SSGQLG         P  V    G       ++AG +HS  V   G ++  G   
Sbjct: 319 AWGHNSSGQLGDDSSTSRSVPVQVRGLSGG----MAVTAGSSHSLAVGSDGTVWAWGSNF 374

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            G+ G G   + +SPV+V          +A G  HSL    D     V+ +GS   GQLG
Sbjct: 375 SGERGEGTTNNRASPVQVQGLGGGVA--VAAGFNHSLAARSD---GSVWAWGSNDSGQLG 429

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 R+ + P    GL  +  V ++A  D S AL ++G ++ WG       G  +T++
Sbjct: 430 --DGTTRNSTSPVQVQGLSGV--VAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTN 485

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  + S +     A G NH L +  DG V   G + +G L D    +S R + V ++
Sbjct: 486 RLVPVQVLSGVV--AVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDG--TTSNRLVPVQVQ 541

Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTGKFHWV---------------RLFIISYTPFFPP- 371
            +S      V  +AAG+ HS AV +    W                   +    P     
Sbjct: 542 GLSG-----VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG 596

Query: 372 -------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                  F   V+  +  + TWG    G+LG G T  +  P
Sbjct: 597 VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVP 637



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 151/357 (42%), Gaps = 41/357 (11%)

Query: 7   EETEKGKSALINNAKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLN 62
           E+T +G       ++ ++         ++    VW+ G+   GQLG G   +  +P  + 
Sbjct: 34  EQTSRGAPLRDAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAP--VQ 91

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
           +  LS V  +A G +H LA+        G V++WG  S GQLG G     L P  V    
Sbjct: 92  VPGLSGVVAVAAGSSHSLAVRHD-----GTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLS 146

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           G    +  ++AG ++S  V   G ++  G    GQLG G   +   PV+V       V  
Sbjct: 147 G----VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGL--SGVVS 200

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGI 240
           +A G  HSL +L D     V+ +G+   GQL  G   +R+  V +P ++  +        
Sbjct: 201 VAAGSSHSLAVLSD---GSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGA-- 255

Query: 241 SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
                 S A+ ++G ++TWG       G  + SD   P  +        + +G  H L L
Sbjct: 256 ----AHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDVGSYHSLAL 311

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             DG V   G +  G L D    S + P+     +V  L G   + + AG+ HS  V
Sbjct: 312 RSDGSVWAWGHNSSGQLGDDSSTSRSVPV-----QVRGLSG--GMAVTAGSSHSLAV 361



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 38/313 (12%)

Query: 47  LGTGRLHDELSPQLLN---LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
           +G G   DE + Q      L    S + LA G ++ LAL        G V++ G    GQ
Sbjct: 23  VGCGLPTDESAEQTSRGAPLRDAPSRARLAAGSSYSLALRPD-----GTVWATGSNDLGQ 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G   +   P  V    G    +  ++AG +HS  V   G ++  G  + GQLG G  
Sbjct: 78  LGDGTTTNHSAPVQVPGLSG----VVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTT 133

Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIR 221
               +PV+V       V  +A G  +SL +  D     V+ +GS   GQL  G + +R+ 
Sbjct: 134 TMRLTPVRVQGL--SGVVSVAAGSSYSLAVRSD---GTVWAWGSNFSGQLGDGTTSNRLV 188

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVN--CPQSL 275
            V +P ++       +V ++A    S A+ ++G ++ WG          + +N   P  +
Sbjct: 189 PVQVPGLS------GVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQV 242

Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
           P        A G  H L +  DG V   G +  G L D  +     P+     +V  L G
Sbjct: 243 PGLSGVVAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPV-----RVQGLSG 297

Query: 336 VKVIQIAAGAEHS 348
           V    +  G+ HS
Sbjct: 298 VVASDV--GSYHS 308


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GRL   + +PQ +   S   +  ++ G AH +AL+     + G V
Sbjct: 126 ELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALS-----MSGNV 180

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWGR   GQLG G      +P  +   D  +  +  ++ G +H+  ++  G +FT G G
Sbjct: 181 YSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ--VEFLACGGSHTALLTTDGLVFTFGAG 238

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH   ++   P  V+      V QIACG RH+L  + D LG +V+ FGSGK GQL
Sbjct: 239 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSD-LG-KVFSFGSGKEGQL 296

Query: 214 GVSKDRIRSVSLP 226
           G      + + LP
Sbjct: 297 GNGGTHNQLIPLP 309



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 38/259 (14%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
            S+  +ACG  H LAL+      GG++F+WG+   GQLG G +  ++  P+ V    G  
Sbjct: 106 KSIIQIACGDYHSLALSK-----GGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSG-- 158

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG  HS  +S SG +++ G    GQLG G       P  + +  N+ V  +AC
Sbjct: 159 VPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLAC 218

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  H+ +L  D L   V+ FG+GK GQLG   +++ +R    P++   L    +  I+  
Sbjct: 219 GGSHTALLTTDGL---VFTFGAGKYGQLGHNSTQNELR----PRLVTELAGNRVTQIACG 271

Query: 244 GDRSAALSAE-GHLYTWGRGFN--------STSDVNCPQSLPSS--LSFSQAALGWNHVL 292
              + A  ++ G ++++G G              +  P  LPS+  L F           
Sbjct: 272 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESR-------- 323

Query: 293 VLTGDGEVLMLGGSHHGML 311
             T D E++M+ G +  +L
Sbjct: 324 --TSDKELVMIAGGNQSVL 340



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 118/264 (44%), Gaps = 48/264 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K++ QIACG  HSL L K   G +++ +G    GQLGV +    S+  PQ    L  + +
Sbjct: 106 KSIIQIACGDYHSLALSK---GGELFAWGQNLHGQLGVGR-LFASIPTPQAVEHLSGVPL 161

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
           V ISA    S ALS  G++Y+WGR      G   T   + P SL  +L   Q    A G 
Sbjct: 162 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFP-SLIETLDNQQVEFLACGG 220

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG V   G   +G L      +  RP       V+ L G +V QIA G  H+
Sbjct: 221 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRP-----RLVTELAGNRVTQIACGRRHT 275

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T +Q+ P  +
Sbjct: 276 -------------------------LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 310

Query: 409 NLGD----EFQNRDTQLEVFCGSG 428
            L      +F++R +  E+   +G
Sbjct: 311 KLPSNEELKFESRTSDKELVMIAG 334



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG     +EL P+L+   + + V+ +ACG  H LA  S      GKVFS
Sbjct: 232 VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL----GKVFS 287

Query: 96  WGRGSSGQLGHGEMVDALYPKPV 118
           +G G  GQLG+G   + L P P+
Sbjct: 288 FGSGKEGQLGNGGTHNQLIPLPM 310



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 103/267 (38%), Gaps = 69/267 (25%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +H +  G  H L+L  D           GK  +   S +  R   +      L +  I+
Sbjct: 67  KIHSVDQGAEHMLILSSD-----------GKPFEYNYSIEHARFQCI------LQEKSII 109

Query: 239 GISANGDRSAALSAEGHLYTWGRGFNST-------SDVNCPQSLP--SSLSFSQAALGWN 289
            I+     S ALS  G L+ WG+  +         + +  PQ++   S +   Q + G  
Sbjct: 110 QIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKA 169

Query: 290 HVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
           H + L+  G V   G +  G L    +D E   S          +  LD  +V  +A G 
Sbjct: 170 HSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSL---------IETLDNQQVEFLACGG 220

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            H+A++T                           +  + T+G G++GQLG  +T +++ P
Sbjct: 221 SHTALLTT--------------------------DGLVFTFGAGKYGQLGHNSTQNELRP 254

Query: 406 KVVNLGDEFQNRDTQLEVFCGSGFTYA 432
           ++V   +   NR TQ+   CG   T A
Sbjct: 255 RLVT--ELAGNRVTQIA--CGRRHTLA 277


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 170/380 (44%), Gaps = 51/380 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG    GQLG G   +   P  ++  S S    +A G  H   L+       G++FS
Sbjct: 160 VLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFVAAGSQHSFVLSK-----FGELFS 214

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G+ G+LGHG  + +  P+P++   G    I  ++AG  HS  V   G L+T G   +
Sbjct: 215 FGCGTFGRLGHGNELPSFNPRPISTLVGKH--IVSVAAGLMHSAAVDSQGALYTWGWNRY 272

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G  + H+ P K       N+ ++ CG  H+LVL  D  G  VY FG    GQLG+
Sbjct: 273 GQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVL--DVNG-HVYSFGFNVCGQLGI 329

Query: 216 SKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSDVNC 271
                 S+   ++ + L  + EI+ I+A       L+ +G +Y++G    G     DV  
Sbjct: 330 GS-YTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVG 388

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            QS P  + FS     +NH    + D    + G  +    +D    ++  P  V   ++ 
Sbjct: 389 HQSRPKLMPFSH----FNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPPKVV--ELH 442

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
           N  G   ++IAAG  HSA++T      RL+                       T+G G++
Sbjct: 443 NEIGDVAVKIAAGGWHSAIITSSG---RLY-----------------------TFGLGDN 476

Query: 392 GQLGLGNTC--DQIHPKVVN 409
               LGN C  DQ  P +VN
Sbjct: 477 --FRLGNNCQEDQDMPCIVN 494



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 50/343 (14%)

Query: 7   EETEKGKSALINNAKPKIEEEEEE-------QQVVKVWSWGAGTDGQLG----------- 48
           E+   G   L  + K + +E++++       Q   +++SWG    GQ             
Sbjct: 51  EDDSDGSDTLRKSKKKRSQEDQKQYDKYNNPQYFGQLYSWGYNFYGQCALDNNHNHNNNN 110

Query: 49  -----TGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
                     D+ +  ++ L +L      VSM+ACG +H LA+    +     V SWG  
Sbjct: 111 NNKQTVDEDDDDSNFNIIKLPTLIKQGLIVSMIACGDSHALAVLPNDAT----VLSWGCN 166

Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTI-THISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
             GQLG G+ V+  +P P++   G   +I   ++AG  HS  +S  G LF+ G GTFG+L
Sbjct: 167 RWGQLGLGDQVNRCHPTPIS---GLSQSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRL 223

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           GHG+     +P  +S+ V K++  +A G+ HS  +  D  G  +Y +G  + GQLG+   
Sbjct: 224 GHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAAV--DSQG-ALYTWGWNRYGQLGLGT- 279

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCP 272
            ++  +LP     L    IV +    + +  L   GH+Y++G       G  S +D   P
Sbjct: 280 -VKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKP 338

Query: 273 QSLPSSLSFSQA----ALGWNHVLVLTGDGEVLMLGGSHHGML 311
             +   L  +      A G+ HVL+LT  G V   G    G L
Sbjct: 339 NRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGAL 381



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 96/274 (35%), Gaps = 85/274 (31%)

Query: 162 DYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
           D  S+ + +K+ + + +   V  IACG  H+L +L +     V  +G  + GQLG+    
Sbjct: 120 DDDSNFNIIKLPTLIKQGLIVSMIACGDSHALAVLPN--DATVLSWGCNRWGQLGLGDQV 177

Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSL 279
            R           H   I G+S                               QS+P  +
Sbjct: 178 NR----------CHPTPISGLS-------------------------------QSIPVFV 196

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
                A G  H  VL+  GE+   G    G L     + S  P       +S L G  ++
Sbjct: 197 -----AAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNP-----RPISTLVGKHIV 246

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
            +AAG  HSA V  +                           A+ TWGW  +GQLGLG  
Sbjct: 247 SVAAGLMHSAAVDSQ--------------------------GALYTWGWNRYGQLGLGTV 280

Query: 400 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
                P   N   E + R   ++V CG   T  +
Sbjct: 281 KKHTLP---NKNKELE-RFNIVKVVCGKNHTLVL 310


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GRL   + +PQL+   S   +  ++ G AH +AL+     + G +
Sbjct: 67  ELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMALS-----MSGNI 121

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWGR   GQLG G      +P  V   D  +  +  ++ G +H+  +++ G +FT G G
Sbjct: 122 YSWGRNDLGQLGLGHTDGEEFPSLVEALDSQK--VEFLACGGSHTALLTEDGQVFTFGAG 179

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+      V Q+ACG RH+L  + D LG +V+ FGSGK GQL
Sbjct: 180 KHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSD-LG-KVFSFGSGKEGQL 237

Query: 214 GVSKDRIRSVSLP 226
           G      + + LP
Sbjct: 238 GNGGTHNQLIPLP 250



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 48/264 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K++ QI CG  HSL L K   G +++ +G    GQLG+ +    S+  PQ+   L  + +
Sbjct: 47  KSIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGIGR-LFASIPTPQLVEHLSGVPL 102

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
           V ISA    S ALS  G++Y+WGR      G   T     P SL  +L   +    A G 
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFP-SLVEALDSQKVEFLACGG 161

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG+V   G   HG L      +  RP       V+ L G++V Q+A G  H+
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRP-----RLVTELTGIRVTQVACGRRHT 216

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T +Q+ P  +
Sbjct: 217 -------------------------LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 251

Query: 409 NLGD----EFQNRDTQLEVFCGSG 428
            L      +F++R ++ E+   +G
Sbjct: 252 KLPSNEDLKFESRTSEKELIMIAG 275



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 38/259 (14%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
            S+  + CG  H LAL+      GG++F+WG+   GQLG G +  ++  P+ V    G  
Sbjct: 47  KSIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSG-- 99

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG  HS  +S SG +++ G    GQLG G       P  V +  ++ V  +AC
Sbjct: 100 VPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLAC 159

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  H+ +L +D    QV+ FG+GK GQLG   +++ +R    P++   L  I +  ++  
Sbjct: 160 GGSHTALLTED---GQVFTFGAGKHGQLGHNSTQNELR----PRLVTELTGIRVTQVACG 212

Query: 244 GDRSAALSAE-GHLYTWGRGFN--------STSDVNCPQSLPSS--LSFSQAALGWNHVL 292
              + A  ++ G ++++G G              +  P  LPS+  L F           
Sbjct: 213 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESR-------- 264

Query: 293 VLTGDGEVLMLGGSHHGML 311
             T + E++M+ G +  +L
Sbjct: 265 --TSEKELIMIAGGNQSIL 281



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 10/177 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++SWG    GQLG G    E  P L+       V  LACGG+H   LT       G+VF+
Sbjct: 121 IYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTE-----DGQVFT 175

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G G  GQLGH    + L P+ VT   G R  +T ++ G  H+  +VSD G +F+ G G 
Sbjct: 176 FGAGKHGQLGHNSTQNELRPRLVTELTGIR--VTQVACGRRHTLAYVSDLGKVFSFGSGK 233

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            GQLG+G   +   P+ +    N+++   +      L+++    GNQ      GK+ 
Sbjct: 234 EGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAG--GNQSILLWMGKKN 288



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+++GAG  GQLG     +EL P+L+   +   V+ +ACG  H LA  S      GKVF
Sbjct: 172 QVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDL----GKVF 227

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTF 120
           S+G G  GQLG+G   + L P P+  
Sbjct: 228 SFGSGKEGQLGNGGTHNQLIPLPMKL 253



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 65/243 (26%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +H +  G  H L+L  D           GK  +   S +  R   +      L +  I+
Sbjct: 8   KIHSVDQGAEHMLILSSD-----------GKPFEYNYSIEHARFQCI------LQEKSII 50

Query: 239 GISANGDRSAALSAEGHLYTWGRGFNST-------SDVNCPQSLP--SSLSFSQAALGWN 289
            I+     S ALS  G L+ WG+  +         + +  PQ +   S +   Q + G  
Sbjct: 51  QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKA 110

Query: 290 HVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
           H + L+  G +   G +  G L    +D E   S          V  LD  KV  +A G 
Sbjct: 111 HSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSL---------VEALDSQKVEFLACGG 161

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            H+A++T                          E+  + T+G G+HGQLG  +T +++ P
Sbjct: 162 SHTALLT--------------------------EDGQVFTFGAGKHGQLGHNSTQNELRP 195

Query: 406 KVV 408
           ++V
Sbjct: 196 RLV 198


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+I+ ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 31/298 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG G   D L P+L++    ++V ++ACG  H  A+T     + G ++
Sbjct: 325 EVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVT-----LSGDLY 379

Query: 95  SWGRGSS---GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +WG GSS   G LG+        PK +    +G    +  +S G  H+  V+ SG LFT 
Sbjct: 380 TWG-GSSHNCGLLGYRNEASNWVPKKLNGPLEG--IHVAAVSCGPWHTAVVTSSGQLFTF 436

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDGTFG LGHGD RS S+P +V S       + ACG+ H+  +++  +G+         +
Sbjct: 437 GDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 496

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
           ++ +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT   
Sbjct: 497 LFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGS 554

Query: 259 --WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
             +G+  N  +D   P  +   LS     +   G  HV VLT   EV   G   +G L
Sbjct: 555 PVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRL 612



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 138/358 (38%), Gaps = 63/358 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +  I+ G  H+  V+  G +F+ G+   G+LGHG       P  V    N NV  +ACG 
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGE 366

Query: 188 RHSLVLLKDCLGNQVYGFG--SGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANG 244
            HS  +    L   +Y +G  S   G LG   +   S  +P+   G L  I +  +S   
Sbjct: 367 YHSCAVT---LSGDLYTWGGSSHNCGLLGYRNE--ASNWVPKKLNGPLEGIHVAAVSCGP 421

Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNH----VL 292
             +A +++ G L+T+G       G      V+ P+ + S   L   +AA G  H    V 
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVE 481

Query: 293 VLTG--------DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
           V+ G         G++   G    G L   ++ S   P  VA     N       Q+A G
Sbjct: 482 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNF-----CQVACG 536

Query: 345 AEHSAVVTGKFHWVRLFIISYTPFFPP--------------------------FFINVIA 378
              +  +T   H   +    Y     P                          + + V+ 
Sbjct: 537 HSMTVALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLT 596

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
               + TWG G +G+LG G+T D+  P +V    + Q +     V CG+ FT AI  H
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKS----VVCGTSFTAAICLH 650



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 10/171 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      +   +ACG +  +ALT+      G V+
Sbjct: 496 KLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTT-----TGHVY 550

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G    GQLG+ +  D   P  V       + +  +  G  H   ++    ++T G G 
Sbjct: 551 TMGSPVYGQLGNPQ-ADGKLPVRVEGKLSKNF-VEELDCGAYHVAVLTSRTEVYTWGKGA 608

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            G+LGHGD    SSP  V +  +K V  + CG   +  +   CL   V G 
Sbjct: 609 NGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAI---CLHKWVSGI 656



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 47/284 (16%)

Query: 170 VKVSSFVNK--------NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
           V+  SFV K        +V  IACG RH+ ++ K     +V+ +G    G+LG   D   
Sbjct: 289 VRTDSFVPKALESAVLLDVQTIACGRRHAALVTKQ---GEVFSWGEELGGRLGHGVDS-- 343

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNSTSDVNCPQ 273
            V  P++  GL +  +  ++     S A++  G LYTWG         G+ + +    P+
Sbjct: 344 DVLHPKLVDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPK 403

Query: 274 SLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
            L   L     +  + G  H  V+T  G++   G    G+L   +R S + P      +V
Sbjct: 404 KLNGPLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTP-----REV 458

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
            +L G++ ++ A G  H+A V      V + + S +        +    +  + TWG G+
Sbjct: 459 ESLKGLRTVRAACGVWHTAAV------VEVMVGSSS--------SSNCSSGKLFTWGDGD 504

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            G+LG G+   ++ P  V    E        +V CG   T A++
Sbjct: 505 KGRLGHGDKESRLVPTCVAALVE----PNFCQVACGHSMTVALT 544


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL++ + V     +SWG G  G+LGHG  +    PK +    G  Y I  I+ G
Sbjct: 3126 GGKHCLALSADNDV-----YSWGEGDDGKLGHGNRLACETPKLIEALQG--YEIIDIACG 3178

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G L+T G G +G+LGHGD      P  +   V   V  +ACG     +L 
Sbjct: 3179 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLC 3238

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       +P+    L  + ++ +      S AL+ 
Sbjct: 3239 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR 3293

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        +   V  P+ + +         A G  H +  + +GEV   G
Sbjct: 3294 SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 3353

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP       VS L G K+  +A G+ H+
Sbjct: 3354 DNDEGQLGDDTTNAIQRP-----RLVSALQGKKITNVACGSAHT 3392



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 131/267 (49%), Gaps = 22/267 (8%)

Query: 36   VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+SWG G DG+LG G RL  E +P+L+       +  +ACGGAH  A+TS      G+++
Sbjct: 3139 VYSWGEGDDGKLGHGNRLACE-TPKLIEALQGYEIIDIACGGAHSAAITS-----TGQLY 3192

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK +    G++       +G   +  ++D   +++ GDG 
Sbjct: 3193 TWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 3252

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P K+ S     V ++ CG + S+ L +      VY +G G   +LG
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 3309

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                    V  P+    L   +I+ I+       A S EG ++TWG       G ++T+ 
Sbjct: 3310 HGTG--EHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 3367

Query: 269  VNCPQSLPSSL---SFSQAALGWNHVL 292
            +  P+ L S+L     +  A G  H L
Sbjct: 3368 IQRPR-LVSALQGKKITNVACGSAHTL 3393



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 174/410 (42%), Gaps = 59/410 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V+ WG     QLG  +    +L  Q   LS L  + +   GG+  L + S      GK+
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHI--AGGSKSLFIVSHE----GKL 2109

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++ G G++G+LG G   +  YP+P+ F   +      + +G  H+  ++  G +F+ G+G
Sbjct: 2110 YACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG 2169

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHG+  +   P  + +  +K +  IACG  HS  +       ++Y +G G+ G+L
Sbjct: 2170 EDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 2226

Query: 214  GVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
            G   D I  +  P++   L  H I  V   +   ++ AL+ EG +++WG       G   
Sbjct: 2227 G-HGDNITQLK-PKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG 2284

Query: 266  TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            +   N P ++   ++L   Q   G    L LT  GEV   G   +  L         +P 
Sbjct: 2285 SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPT 2344

Query: 324  SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                  + +L   KVI +A GA H   VT                          +   +
Sbjct: 2345 V-----IESLKDKKVIHVAVGALHCLAVT--------------------------DTGQV 2373

Query: 384  MTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 432
              WG  +HGQ G G T     P +V+ L D   NR     V CGS  + A
Sbjct: 2374 YAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINR-----VACGSSHSIA 2418



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 23/256 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
            ++++WG G  G+LG G   D+L P+L+       V  +ACG   A  L +T   +     
Sbjct: 3190 QLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN----- 3244

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            V+SWG G  G+LG G       PK +    G    +  +  G   S  ++ SG ++T G 
Sbjct: 3245 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAG--LGVIKVECGSQFSVALTRSGSVYTWGK 3302

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G + +LGHG       P KV++   K +  IA G  H +    +    +V+ +G    GQ
Sbjct: 3303 GDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE---GEVFTWGDNDEGQ 3359

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
            LG   D   ++  P++   L   +I  ++             H   W     S++    P
Sbjct: 3360 LG--DDTTNAIQRPRLVSALQGKKITNVAC---------GSAHTLAWSTNNASSACARLP 3408

Query: 273  QSLPSSLSFSQAALGW 288
               P      Q    W
Sbjct: 3409 PVAPLEYDLLQDIPTW 3424



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 154/388 (39%), Gaps = 66/388 (17%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G ++  
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV--QLVGGEQTLFAVTADGKVYAT 3088

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S   P  + S  +  + +IA   G +H L L  D   N VY +G G
Sbjct: 3089 GYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSAD---NDVYSWGEG 3145

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
              G+LG   +R+ +   P++   L   EI+ I+  G  SAA+++ G LYTWG+G      
Sbjct: 3146 DDGKLG-HGNRL-ACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLG 3203

Query: 263  FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----SDP 314
               + D   P+ +   + +    +    G    L +T D  V   G   +G L    SD 
Sbjct: 3204 HGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 3263

Query: 315  ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYT 366
             +V          +K+ +L G+ VI++  G++ S  +T        GK  + RL   +  
Sbjct: 3264 CKVP---------KKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGE 3314

Query: 367  PFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKVV 408
                P  +  +   + I                   TWG  + GQLG   T     P++V
Sbjct: 3315 HVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLV 3374

Query: 409  NL--GDEFQNRDTQLEVFCGSGFTYAIS 434
            +   G +  N      V CGS  T A S
Sbjct: 3375 SALQGKKITN------VACGSAHTLAWS 3396


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 169/389 (43%), Gaps = 59/389 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG   +G LG G   +  SP  + +  L+ ++ ++ G AH +AL S      G V++
Sbjct: 56  VWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGITAISAGWAHFVALKSD-----GTVWT 108

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G SG+LG G       P P+    G    IT ISAGWNH+  +   G L++ G   +
Sbjct: 109 WGVGYSGELGDGTNSLRTTPAPINGLTG----ITAISAGWNHTLALKADGTLWSWGQNQY 164

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G+  + + P++V   +   +  I+ G  HSLV+  D     V+ +G    GQLG 
Sbjct: 165 GQLGTGNTTNSNIPLQVPGQIG--ITSISSGGGHSLVIKND---GTVWSWGCNNFGQLGN 219

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
             +       P    GL+ I  + +SA    S AL ++G ++ WG  F       +  D 
Sbjct: 220 GTNSNNPT--PHQISGLNGI--INVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDS 275

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P              GW     +  DG   + G + +G L +  +   T P+     +
Sbjct: 276 YIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPM-----Q 330

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           VS+L G+           +A+ TG  + V L                   +  I  +G  
Sbjct: 331 VSSLSGI-----------TAIDTGATYTVAL-----------------KTDGNIFAFGEN 362

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
            +GQLG G T     P++V++GD +   D
Sbjct: 363 TYGQLGNGTTTGSTTPELVSIGDTYVATD 391



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 46/308 (14%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           +SAG   +  + + G +++ G    G LG G   + +SPV+V       +  I+ G  H 
Sbjct: 40  VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL--NGITAISAGWAHF 97

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           + L  D     V+ +G G  G+LG   + +R+   P    GL    I  ISA  + + AL
Sbjct: 98  VALKSD---GTVWTWGVGYSGELGDGTNSLRTTPAP--INGL--TGITAISAGWNHTLAL 150

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            A+G L++WG+      G  +T++ N P  +P  +  +  + G  H LV+  DG V   G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGTVWSWG 210

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLF 361
            ++ G L +    ++  P      ++S L+G  +I ++AG  HS  +      ++W   F
Sbjct: 211 CNNFGQLGNGTNSNNPTP-----HQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNF 263

Query: 362 ---------IISYTPFFPP------------FFINVIAENRAIMTWGWGEHGQLGLGNTC 400
                    I SY P                 F + I  +     WG  ++GQLG G+  
Sbjct: 264 RGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKS 323

Query: 401 DQIHPKVV 408
           D   P  V
Sbjct: 324 DVTSPMQV 331



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 39/174 (22%)

Query: 238 VGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHV 291
           + +SA    + AL  +G +++WG   N      +TS+ N P  +      +  + GW H 
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           + L  DG V   G  + G L D      T P       ++ L G+    I+AG  H+   
Sbjct: 98  VALKSDGTVWTWGVGYSGELGDGTNSLRTTP-----APINGLTGITA--ISAGWNHTL-- 148

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                                    +  +  + +WG  ++GQLG GNT +   P
Sbjct: 149 ------------------------ALKADGTLWSWGQNQYGQLGTGNTTNSNIP 178


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+I+ ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 37/338 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D + P+L+   ++S+V  +ACG  H  A+T     + G+++
Sbjct: 300 EVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVT-----MAGEIY 354

Query: 95  SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+  +G LGHG  V    PK ++   +G    +  ++ G  H+  V+ +G LFT G
Sbjct: 355 TWGDGTHNAGLLGHGNDVSHWIPKRISGPLEG--LQVASVTCGPWHTALVTSTGQLFTFG 412

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
           DGTFG LGHGD  + + P +V S         ACG+ H+  +++  +          +++
Sbjct: 413 DGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLF 472

Query: 204 GFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
            +G G + +L  G  + R++   +P     L D     I+     +  L+  GH++    
Sbjct: 473 TWGDGDKNRLGHGDKEPRLKPTCVP----ALIDYNFHKIACGHSLTVGLTTSGHVFAMGS 528

Query: 259 --WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
             +G+  N  +D   P  +   L   S  + A G  HV VLT   EV   G   +G L  
Sbjct: 529 TVYGQLGNPYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGH 588

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            +      P+ V       L    V  IA GA ++A +
Sbjct: 589 GDIEDRKAPILVEA-----LKDRHVKYIACGANYTAAI 621



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 179/409 (43%), Gaps = 69/409 (16%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACG  H   +T       G+VF+WG  S G+LGHG   D +
Sbjct: 267 DVLLPRPLESNVVLDVHHIACGVRHAALVTRQ-----GEVFTWGEESGGRLGHGVGKDVI 321

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
            P+ V        T+  ++ G  H+  V+ +G ++T GDGT   G LGHG+  SH  P +
Sbjct: 322 QPRLVESL--AVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKR 379

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           +S  +    V  + CG  H+ ++       Q++ FG G  G LG   DR  +V+ P+   
Sbjct: 380 ISGPLEGLQVASVTCGPWHTALVTST---GQLFTFGDGTFGVLG-HGDR-ENVAYPREVE 434

Query: 231 GLHDIEIVGISANGDRSAAL-----------SAEGHLYTWGRGFNS------TSDVNCPQ 273
            L  +  +  +     +AA+            + G L+TWG G  +            P 
Sbjct: 435 SLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPT 494

Query: 274 SLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            +P+ + ++   +   H L   LT  G V  +G + +G L +P    +   L   +E   
Sbjct: 495 CVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNP---YADGKLPCLVE--D 549

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L G  V +IA GA H AV+T +                            + TWG G +
Sbjct: 550 KLSGESVEEIACGAYHVAVLTSR--------------------------NEVYTWGKGAN 583

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 440
           G+LG G+  D+  P +V   +  ++R  +  + CG+ +T AI  H L S
Sbjct: 584 GRLGHGDIEDRKAPILV---EALKDRHVKY-IACGANYTAAICLHKLVS 628


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 169/389 (43%), Gaps = 59/389 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG   +G LG G   +  SP  + +  L+ ++ ++ G AH +AL S      G V++
Sbjct: 56  VWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGITAISAGWAHFVALKSD-----GTVWT 108

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G SG+LG G       P P+    G    IT ISAGWNH+  +   G L++ G   +
Sbjct: 109 WGVGYSGELGDGTNSLRTTPAPINGLTG----ITAISAGWNHTLALKADGTLWSWGQNQY 164

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G+  + + P++V   +   +  I+ G  HSLV+  D     V+ +G    GQLG 
Sbjct: 165 GQLGTGNTTNSNIPLQVPGQIG--ITSISSGGGHSLVIKND---GTVWSWGCNNFGQLGN 219

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
             +       P    GL+ I  + +SA    S AL ++G ++ WG  F       +  D 
Sbjct: 220 GTNSNNPT--PHQISGLNGI--INVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDS 275

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P              GW     +  DG   + G + +G L +  +   T P+     +
Sbjct: 276 YIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPM-----Q 330

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           VS+L G+           +A+ TG  + V L                   +  I  +G  
Sbjct: 331 VSSLSGI-----------TAIDTGATYTVAL-----------------KTDGNIFAFGEN 362

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
            +GQLG G T     P++V++GD +   D
Sbjct: 363 TYGQLGNGTTTGSTTPELVSIGDTYVATD 391



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 46/308 (14%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           +SAG   +  + + G +++ G    G LG G   + +SPV+V       +  I+ G  H 
Sbjct: 40  VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL--NGITAISAGWAHF 97

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           + L  D     V+ +G G  G+LG   + +R+   P    GL    I  ISA  + + AL
Sbjct: 98  VALKSD---GTVWTWGVGYSGELGDGTNSLRTTPAP--INGLTG--ITAISAGWNHTLAL 150

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            A+G L++WG+      G  +T++ N P  +P  +  +  + G  H LV+  DG V   G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGTVWSWG 210

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLF 361
            ++ G L +    ++  P      ++S L+G  +I ++AG  HS  +      ++W   F
Sbjct: 211 CNNFGQLGNGTNSNNPTP-----HQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNF 263

Query: 362 ---------IISYTPFFPP------------FFINVIAENRAIMTWGWGEHGQLGLGNTC 400
                    I SY P                 F + I  +     WG  ++GQLG G+  
Sbjct: 264 RGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKS 323

Query: 401 DQIHPKVV 408
           D   P  V
Sbjct: 324 DVTSPMQV 331



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 39/174 (22%)

Query: 238 VGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHV 291
           + +SA    + AL  +G +++WG   N      +TS+ N P  +      +  + GW H 
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           + L  DG V   G  + G L D      T P       ++ L G+    I+AG  H+   
Sbjct: 98  VALKSDGTVWTWGVGYSGELGDGTNSLRTTP-----APINGLTGITA--ISAGWNHTL-- 148

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                                    +  +  + +WG  ++GQLG GNT +   P
Sbjct: 149 ------------------------ALKADGTLWSWGQNQYGQLGTGNTTNSNIP 178


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 163/411 (39%), Gaps = 102/411 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV++WG  + G+LG G   D   P L+    + ++ ++ACG  H  A++   +      F
Sbjct: 111 KVFTWGEESGGRLGHGIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNF-----F 165

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G LGHG  +    PK V  F DG R  +  ++ G  HS   + +G LFT G
Sbjct: 166 TWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLR--VVSVACGSWHSALATSNGKLFTFG 223

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHGD  S   P +V         ++ACG+ H+  +++         F SG   
Sbjct: 224 DGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIE-------VAFQSGSN- 275

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----ST 266
                                                  ++   L+TWG G         
Sbjct: 276 ---------------------------------------ASSWKLFTWGDGDKFRLGHGN 296

Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            D+    +  S L   +F Q A G    + LT  G V  +G + +G L +P        L
Sbjct: 297 KDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTL 356

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                    L G  + +I+ GA H A VT +                            +
Sbjct: 357 VQ-----DKLLGEFIEEISCGAHHVAAVTSR--------------------------SEL 385

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAI 433
            TWG G +G+LG G+T D+  P +V        +D  L+ + CGS FT  +
Sbjct: 386 YTWGKGSNGRLGHGDTDDRKSPTLV-----LALKDRHLKNISCGSNFTSCV 431



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 26/195 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   +ACG    +ALT+      G VF
Sbjct: 280 KLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTT-----SGHVF 334

Query: 95  SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           + G   +GQLG+    G++   +  K +  F      I  IS G +H   V+    L+T 
Sbjct: 335 TMGSTENGQLGNPNAAGKVPTLVQDKLLGEF------IEEISCGAHHVAAVTSRSELYTW 388

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS--- 207
           G G+ G+LGHGD     SP  V +  ++++  I+CG          C+ NQ Y  G+   
Sbjct: 389 GKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSN-----FTSCVCNQKYVSGTDQS 443

Query: 208 ---GKRGQLGVSKDR 219
              G R   G+++ R
Sbjct: 444 VCFGCRQPFGLTRIR 458


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 146/330 (44%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS EG  + WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 158/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K+    + + +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKE---GEFFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S  G  F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKEGEFFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 57/231 (24%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALT-------- 83
           +V++WG  +DGQLG  G       P+  N+ SLS + +  +ACG  H LAL+        
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLALSKEGEFFCW 161

Query: 84  ------------------SPSSV----------------------IGGKVFSWGRGSSGQ 103
                             SP  +                      + G +F WGR   GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G +GQLGH   
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279

Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
               +P KV   +   V QIACG +H+   +      ++Y FG G  GQLG
Sbjct: 280 SHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQLG 328


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S   + F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S V     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S   + F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S V     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 161/383 (42%), Gaps = 56/383 (14%)

Query: 39  WGAGTDGQLGTGR-LHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG    GQLG G  L + +S P     S  + V  +ACGG H L L        G+V+S 
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLME-----DGQVYSC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G    GQLGH    +  +P PV T  + H   I HI+ G +HS  +S  G L++ G G  
Sbjct: 59  GWNGEGQLGHSH--EGTHPAPVATLAEEH---IKHIACGQSHSLALSLQGNLYSWGAGND 113

Query: 156 GQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLGH     +S  P  +     + + Q++CG  H L L  D    Q++ +G    GQLG
Sbjct: 114 GQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDD---GQLFTWGQNTHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS--T 266
           +    I S S PQ    L  I +  ++A G  S ALS  G ++ WG+      G N    
Sbjct: 171 LGNGFI-SQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQV 229

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            +  C      +      + G  H  +LT  G +   G    G L      +   P    
Sbjct: 230 KETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+              +++ P            +  +  +
Sbjct: 286 -RRVLELMGSEVSQIACGRKHT--------------LAFVP-----------SSGTLYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN 409
           G G+ GQLG G+  +   P VV 
Sbjct: 320 GCGDLGQLGTGHENNVKCPTVVK 342



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  T GQLG G     + SPQ +       ++ +  GG+H  AL+     + G V
Sbjct: 157 QLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ S+GQLG  +      P  V     H+  + +IS G  H+  ++ +G LFT G G
Sbjct: 212 FGWGKNSAGQLGLNDEQVKETPCHVKPLRTHK--VVYISCGEEHTAILTKAGGLFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH    +  +P +V   +   V QIACG +H+L  +       +Y FG G  GQL
Sbjct: 270 GSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPS--SGTLYAFGCGDLGQL 327

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G   +   +V  P V  G
Sbjct: 328 GTGHE--NNVKCPTVVKG 343



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 14/229 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G   +GQLG    H+   P  +   +   +  +ACG +H LAL+     + G ++
Sbjct: 54  QVYSCGWNGEGQLGHS--HEGTHPAPVATLAEEHIKHIACGQSHSLALS-----LQGNLY 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG G+ GQLGH   V+     P       +  I  +S G +H   + D G LFT G  T
Sbjct: 107 SWGAGNDGQLGHA-TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNT 165

Query: 155 FGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G+ + S SSP KV S     + Q+  G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFAL---SLSGAVFGWGKNSAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ ++++    P     L   ++V IS   + +A L+  G L+T+G G
Sbjct: 223 GLNDEQVKET--PCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAG 269


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ + S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S   + F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S V     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
                  + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G + +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 160/337 (47%), Gaps = 33/337 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG G  G+LG G   D   P+ ++         LACG  H  A+T       G ++
Sbjct: 307 EIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQ-----SGDLY 361

Query: 95  SWGRGSSG--QLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           SWG G+     LGHG       PK VT      Y +++++ G  H+  V+ SG LFT GD
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLY-VSYVACGPWHTAVVASSGQLFTFGD 420

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC-------LGN---QV 202
           G+FG LGHGD RS S P +V       V ++ACG+ H+  L++         +G+   QV
Sbjct: 421 GSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQV 480

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
           + +G G++GQLG   +  +   LP+  I L +  I  ++     + +L++ GH+YT    
Sbjct: 481 FTWGDGEKGQLGHGDNDAQ--LLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGST 538

Query: 259 -WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
            +G+  N T+  N P  +   +   S  + A G  HV VLT   E+   G   +G L   
Sbjct: 539 AYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 598

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +   P  V       L   +V  I  G+  +AV+
Sbjct: 599 TIENKREPAVVGF-----LKEKQVKAITCGSNFTAVI 630



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 153/432 (35%), Gaps = 131/432 (30%)

Query: 91  GKVFSWGRG-------SSGQLGHGEMVDALYPKPVT---FFDGHRYTITHISAGWNHSGF 140
           G VF WG          +G   +    D L PK +      D       +I+ G  H+  
Sbjct: 247 GDVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQ-----NIACGKCHAVL 301

Query: 141 VSDSGCLF-----------------------------------------TC--------- 150
           V+  G +F                                         TC         
Sbjct: 302 VTKQGEIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLY 361

Query: 151 --GDGT--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
             GDGT     LGHG+  S   P +V+ +     V  +ACG  H+ V+       Q++ F
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVAS---SGQLFTF 418

Query: 206 GSGKRGQLGVSKDRIRSVSLP------------QVTIGL-HDIEIVGISANGDRSAALSA 252
           G G  G LG   DR RS S+P            +V  G+ H   +V ++     +   S+
Sbjct: 419 GDGSFGALG-HGDR-RSTSVPREVKILSGLIVTKVACGVWHTAALVEVTNEASEAEVGSS 476

Query: 253 EGHLYTWGRGFNST--SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            G ++TWG G         N  Q LP      S+ +  Q A G +  + LT  G V  +G
Sbjct: 477 RGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMG 536

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
            + +G L +P       P  V  + V       V +IA G+ H AV+T K          
Sbjct: 537 STAYGQLGNPT-AKGNFPARVEGDIVE----ASVEEIACGSYHVAVLTSKSE-------- 583

Query: 365 YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF 424
                             I TWG G +GQLG G   ++  P VV    E Q +     + 
Sbjct: 584 ------------------IYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVK----AIT 621

Query: 425 CGSGFTYAISRH 436
           CGS FT  I  H
Sbjct: 622 CGSNFTAVICVH 633


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 118/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V+SWG    GQLG G ++  L P  +  NLS+   V+ +ACG  H L LTS      G+
Sbjct: 119 EVFSWGHNAYGQLGNGTINHGLVPSHISTNLSN-KQVTEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNK-VVVNIACGQMCSMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHST-HTSAAKTQGGHVYMWGQ 336



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G   SG LG G++   L P+ +      +       +G  H    +  G 
Sbjct: 61  TTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSG-PHIVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +F+ G   +GQLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      +++   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 177 GYNNSGQVGSGSTANQAIP-RRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 296 NQSYPTPVVVEK------DRIIEIAA 315


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  ++ G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V Q+A G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  +ACG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  +ACG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  ++ G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V Q+A G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  +ACG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  +ACG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 156/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S     + Q+ACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S PQ+   L  I    I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GYEYKKQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QI  G +H+                 T F P         +  I ++G
Sbjct: 286 RKVFELMGSVVTQITCGRQHT-----------------TAFVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G T ++  P  V 
Sbjct: 321 LGGNGQLGTGTTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 144/331 (43%), Gaps = 58/331 (17%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   ++   P  V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       V +P+    L +I+IV ++     S ALS    +++WG+        G
Sbjct: 114 GQLGLPGTE-ECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
           +      + PQ + S L   F+Q A G  H  VLT  G +   G +  G L    D +R 
Sbjct: 173 YEYKKQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T         + +L   KV+ I  G +H+A +T                         
Sbjct: 232 VPTL--------LKSLRSQKVVHICCGEDHTAALT------------------------- 258

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 -KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +      P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKARKR--PEHVGALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG     + +   P          I  ++ G+ HS  +S    +F+ G   +
Sbjct: 108 WGLATDGQLGLPGTEECVR-VPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKY 166

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G +Y+  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQLG
Sbjct: 167 GQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVL---TLSGAIFGWGRNKFGQLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           ++ D  R V  P +   L   ++V I    D +AAL+ EG ++T+G G
Sbjct: 224 LNDDNDRYV--PTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAG 269



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     + SPQ++        + +A GGAH   LT     + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  + HI  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQK--VVHICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QI CG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SLS + ++  ACG  H LAL+      G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECVRVPR--NIRSLSEIQIVQVACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E      P+ +    G  +    I+AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ V  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       V  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H+  FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGTTSNRKSPFTVK 342


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 152/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGHG   +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHGR--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ KD   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKD-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGHG  R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHG--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG GR  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHGREGNK--PEQIGALADQHIVHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G D+ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +  R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEEDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 82/197 (41%), Gaps = 38/197 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G    H+  VK  S                           V G+ +  RGQL 
Sbjct: 324 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHRGQLS 353

Query: 215 VSKDRIRSVSLPQVTIG 231
            + DR +   + Q+  G
Sbjct: 354 ATADRFKYHIVKQIFSG 370


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQLL          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  ++ G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V Q+A G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  +ACG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  +ACG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 156/335 (46%), Gaps = 35/335 (10%)

Query: 36  VWSWGAGT-----DGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           + S+G G+     DG+LG G    ++ P+ +L+LS +  V + A G  H L L+      
Sbjct: 130 LLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKV-AAGAHHSLVLSDQ---- 184

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G VFS+G G  G LGHG+    L PK ++     R  +  I+AG  HS  V++SG +++
Sbjct: 185 -GNVFSFGVGIDGSLGHGDQARQLVPKLISSL--QREKVVDIAAGSAHSLVVAESGDVYS 241

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ---VYGFG 206
            G G+ G LGHGD      P K+  FV +   ++A G  HSLVL K  +  Q   V  FG
Sbjct: 242 FGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFG 301

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
               GQLG+        S  QV +    +E   I A    S  L+ +G +Y++G      
Sbjct: 302 QNSYGQLGLGHFSRMIASPAQVQVEAAAVE---IEAGAHHSLVLTNDGRVYSFGLAQHGQ 358

Query: 261 RGFNSTSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  +    N   +L  SL   +    A G N  LVL+ +G V   G   +G L   +  
Sbjct: 359 LGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDES 418

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           ++T+P  V         G  V  I+AG  HS VV 
Sbjct: 419 NATQPTVVFAA------GHTVSAISAGYSHSLVVV 447



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 164/369 (44%), Gaps = 69/369 (18%)

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           ++ G V S+G       GHG+ VD L PK V      R  +  +SAG  HS   +  G L
Sbjct: 75  LVAGNVVSFGLADPS--GHGDHVDKLRPKCVEAL--ARERVRDVSAGLYHSLVATKDGGL 130

Query: 148 FTCGDGTF-----GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
            + G G+      G+LGHGD R+   P  V S     + ++A G  HSLVL     GN V
Sbjct: 131 LSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQ--GN-V 187

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + FG G  G LG   D+ R + +P++   L   ++V I+A    S  ++  G +Y++G G
Sbjct: 188 FSFGVGIDGSLG-HGDQARQL-VPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLG 245

Query: 263 FNST-----SDVN-CPQSLPSSLSFS--QAALGWNHVLVLTG------DGEVLMLGGSHH 308
                    +D++  P+ +   +     + A G +H LVL+       +G VL  G + +
Sbjct: 246 SEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSY 305

Query: 309 GMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
           G L      R+ ++ P  V +E  +       ++I AGA HS V+T              
Sbjct: 306 GQLGLGHFSRMIAS-PAQVQVEAAA-------VEIEAGAHHSLVLT-------------- 343

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVVNLGDEFQNRDTQLEVFC 425
                        +  + ++G  +HGQLG GN   D   P ++    +   R+  ++V  
Sbjct: 344 ------------NDGRVYSFGLAQHGQLGHGNDLRDNPEPTLI----QSLERERIVDVAA 387

Query: 426 GSGFTYAIS 434
           G+ F+  +S
Sbjct: 388 GNNFSLVLS 396



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 9/105 (8%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+S+G    GQLG G  L D   P L+       +  +A G    L L++      G V
Sbjct: 347 RVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAE-----GTV 401

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
           FS+G G +G+LG G+  +A  P  V F  GH  T++ ISAG++HS
Sbjct: 402 FSFGCGKNGRLGKGDESNATQPT-VVFAAGH--TVSAISAGYSHS 443


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 67

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  ++ G  H+  ++D G ++  G  + G
Sbjct: 68  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 123

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 124 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 180

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 181 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 239

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 240 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 294

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V Q+A G +H++                  F P         +  I ++G
Sbjct: 295 RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYSFG 329

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 330 LGGNGQLGTGSTSNRKSPFTVK 351



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 67

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  +ACG  H+L L       QVY +G    
Sbjct: 68  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 122

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 123 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 181

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 182 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 240

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 241 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 269

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 270 GGVFTFGAGGYGQLGHNSTSHEINPRKV 297



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  +ACG AH LAL        G+V++
Sbjct: 64  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 116

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 117 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 174

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 175 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 231

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 232 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 290 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 349

Query: 325 V 325
           V
Sbjct: 350 V 350



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 166 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 218

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 219 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 276

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  G
Sbjct: 277 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 334

Query: 212 QLG 214
           QLG
Sbjct: 335 QLG 337


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328


>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
          Length = 393

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 174/417 (41%), Gaps = 76/417 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG-----AHVLALTSPSSVIG 90
           V SWGAG  GQLG G L D LSP  +       V  ++ GG     +  LA T  +    
Sbjct: 32  VLSWGAGRTGQLGNGTLSDSLSPASVTSLFRGDVDQMSAGGTSSADSFTLARTDKT---- 87

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
             V +WG  S+GQLG+G   +   P  V         +  I+AG  H+  +  SG +++ 
Sbjct: 88  --VKAWGHNSAGQLGNGGNTNQAVPTTVPRL----TNVKDIAAGGKHALALDTSGQVYSW 141

Query: 151 GDGTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           GD ++GQLG+   GD R+   P +V         QI+ G   SL LL++    +VY +G 
Sbjct: 142 GDNSYGQLGNNRTGDSRT--VPDRVQGM--PKAKQISAGCDFSLALLEN---GKVYAWGR 194

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
           G  GQLG       SV  P+   GL DI  V I A    + A++A+  + +WG       
Sbjct: 195 GIHGQLGTGNRATSSV--PRQVTGLEDI--VKIDAGCYHALAITADNTVKSWGYNLYGQL 250

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-----SDPER 316
           G ++T     P  +      S    G  H   +T D  V   G + +G L     +D + 
Sbjct: 251 GNSATKSSTVPVDVDWLTDVSDIEAGAWHNYAMTSDSHVYGWGNNQYGQLLEGDQADGDN 310

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
           +S T     A  ++  L+GV+   +AAGA H   VT                        
Sbjct: 311 ISRTN--RTAPVEIPRLEGVQ--HLAAGARHGVAVTAD---------------------- 344

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                 + TWG    GQLG G T  +    K++  G   +N    L    G   TYA
Sbjct: 345 -----DVFTWGNNSEGQLGNGTTVSRFDSVKILQEGSAIKNVTASL----GGNTTYA 392



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 34/237 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG  + GQLG  R  D  + P    +  +     ++ G    LAL     +  GKV
Sbjct: 137 QVYSWGDNSYGQLGNNRTGDSRTVPD--RVQGMPKAKQISAGCDFSLAL-----LENGKV 189

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WGRG  GQLG G    +  P+ VT  +     I  I AG  H+  ++    + + G  
Sbjct: 190 YAWGRGIHGQLGTGNRATSSVPRQVTGLE----DIVKIDAGCYHALAITADNTVKSWGYN 245

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLG+   +S + PV V      +V  I  G  H+  +  D     VYG+G+ + GQL
Sbjct: 246 LYGQLGNSATKSSTVPVDVDWLT--DVSDIEAGAWHNYAMTSDS---HVYGWGNNQYGQL 300

Query: 214 ---------GVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                     +S+ +R   V +P+       +E V   A G R         ++TWG
Sbjct: 301 LEGDQADGDNISRTNRTAPVEIPR-------LEGVQHLAAGARHGVAVTADDVFTWG 350



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV++WG G  GQLGTG       P+   ++ L  +  +  G  H LA+T+ ++     V 
Sbjct: 188 KVYAWGRGIHGQLGTGNRATSSVPR--QVTGLEDIVKIDAGCYHALAITADNT-----VK 240

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGDG 153
           SWG    GQLG+     +  P  V +       ++ I AG W++    SDS  ++  G+ 
Sbjct: 241 SWGYNLYGQLGNSATKSSTVPVDVDWL----TDVSDIEAGAWHNYAMTSDS-HVYGWGNN 295

Query: 154 TFGQLGHGD--------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            +GQL  GD          + ++PV++     + V  +A G RH + +  D     V+ +
Sbjct: 296 QYGQLLEGDQADGDNISRTNRTAPVEIPRL--EGVQHLAAGARHGVAVTAD----DVFTW 349

Query: 206 GSGKRGQL--GVSKDRIRSVSLPQ 227
           G+   GQL  G +  R  SV + Q
Sbjct: 350 GNNSEGQLGNGTTVSRFDSVKILQ 373


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R +I  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             + GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNSKGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG G+  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 163/398 (40%), Gaps = 67/398 (16%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  S+  +ACGG H + L        G+V++ G  S GQLGH    +   P+ 
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTCGVNSKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQTSPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           V               D F+ R  + ++F G   T+ +
Sbjct: 341 VKGYWAAHSGQLSARADRFKYRVVK-QIFSGGDQTFVL 377



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 12/213 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGHG      +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
           G       +V  P    G        +SA  DR
Sbjct: 328 GTG--HTCNVKCPSPVKGYWAAHSGQLSARADR 358


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GLDCKKQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S   + F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGLDCKKQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S V     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQTSPQLI--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  ++ G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V Q+A G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  +ACG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  +ACG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 180/413 (43%), Gaps = 77/413 (18%)

Query: 50  GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
           G   D L P+LL  +++  V  ++ GG H   +T       G+VF WG GS G LGH   
Sbjct: 290 GMQSDALLPKLLESTTMLDVREISLGGKHAALVTK-----HGEVFCWGEGSGGXLGHKVN 344

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG--QLGHGDYRSHS 167
           +D   PK V    G    +  +S G   +  ++ SG L+T GD   G   +G    RS  
Sbjct: 345 MDMGNPKIVESLTG--VLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQW 402

Query: 168 SPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
            P ++S  +N  ++  +ACG  H  ++       Q++ +G G  G LG  K  + S+S P
Sbjct: 403 IPSRLSGPLNGTSISNVACGEWHMAIV---STSGQLFTYGDGTFGVLGHGK--LESISQP 457

Query: 227 QVTIGL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SDVN 270
           +    L             H   IV + A  DR    +  G L+TWG G        D  
Sbjct: 458 KEVESLSGLWVKAAACGPWHTAAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQE 515

Query: 271 CPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             + LP+ ++      F Q + G    + LT  G V  +G + HG L +P+     +  S
Sbjct: 516 -RKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQ----AKDKS 570

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           +A+     L    V +I++G+ H A +T K                           ++ 
Sbjct: 571 IAIVG-GKLKDEFVKEISSGSYHVAALTSK--------------------------GSLY 603

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           TWG G +GQLGLG+T D+  P VV        RD Q+E + CGSGFT AI  H
Sbjct: 604 TWGMGANGQLGLGDTEDRNSPAVVEAL-----RDRQVESIACGSGFTAAICLH 651



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 32/298 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG G+ G LG     D  +P+++   +   V  ++CG     ALT       G+++
Sbjct: 327 EVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTH-----SGELY 381

Query: 95  SWGRGSSG--QLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG   SG   +G         P  ++   +G   +I++++ G  H   VS SG LFT G
Sbjct: 382 TWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGT--SISNVACGEWHMAIVSTSGQLFTYG 439

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK--------DCLGNQVY 203
           DGTFG LGHG   S S P +V S     V   ACG  H+  +++        +  G +++
Sbjct: 440 DGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLF 499

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G +G+LG   D+ R + LP     L D + V +S     +  L+  G +YT G   
Sbjct: 500 TWGDGDKGRLG-HGDQERKL-LPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAV 557

Query: 264 NSTSDVNCPQSLPSSLSF----------SQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           +    +  PQ+   S++            + + G  HV  LT  G +   G   +G L
Sbjct: 558 H--GQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYTWGMGANGQL 613


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEGGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG++     SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLTTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          +N
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KN 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 153/362 (42%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L       GG+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----GGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT +G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ +G +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKNGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLTTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----NGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 185/446 (41%), Gaps = 64/446 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P+L+   S   V  +ACG AH   +T     I G V 
Sbjct: 4196 EVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACIT-----IQGHVL 4250

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4251 TWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4310

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L +      VY +G G   +LG
Sbjct: 4311 YGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4367

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              + D +R    P+    L   +I+ I+       A S  G ++TWG       G  + S
Sbjct: 4368 HGNTDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVS 4424

Query: 268  DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS--- 324
             +  P+         Q+  G + V V+ G    L L       LS+  R   + PL    
Sbjct: 4425 AIQRPR-------LVQSLQGKHIVKVICGSAHTLALSTYQ---LSEAVRPPPSPPLEYDL 4474

Query: 325  -------------VALEKVSNL--DGVKVIQIAAGAE---------HSAVVTGKFHWVRL 360
                         V L   S L    + ++ IA             +S   TG    ++ 
Sbjct: 4475 VRDIAPEVLHARLVLLHHFSELLCPCLAMLPIAGPLSLASLKDVLVYSIKETGFRKVIQT 4534

Query: 361  FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE---FQNR 417
             ++   P  P   +N I   R+ M  G G  G  G+ +   Q+  K+  L  E     +R
Sbjct: 4535 TMVRDKPHGPVIELNRIQVKRSRMRSGNGLAGVDGMKSVFGQMVQKLPLLTQEALSMPHR 4594

Query: 418  DTQLEVF------CGSGFTYAISRHC 437
              +++        CG GF+ +I+  C
Sbjct: 4595 VWKVKFVGESVDDCGGGFSESIAEMC 4620



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 13/240 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG+G  G+LG G    +  P  +   +   V+ + CG ++  A+T+      G++++
Sbjct: 630 VYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITA-----SGELYT 684

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGRG+ G+LGHG   D   P  VT    HR     +  G  HS  V+++G  F  GDG F
Sbjct: 685 WGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDF 744

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG+      S PV+V       V ++  G + S+ L ++     VY +G G  G+LG 
Sbjct: 745 GKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTRE---GTVYTWGKGHGGRLGH 801

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
                  V  P++   L   +IV ++       AL+A G LY WGR  N    + CP+ +
Sbjct: 802 GNSEHSPV--PKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGR--NDFQQI-CPECV 856



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 27/288 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+VFSWG G  G+LGHG       PK +    G    +  I+ G
Sbjct: 4184 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSG--IGVVDIACG 4236

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++  G + T G G +G+LGHGD      P  V + +      IACG     +L 
Sbjct: 4237 SAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4296

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            +  D   + V+ +G G  G+LG  +       +P     L  + +  +      S AL+ 
Sbjct: 4297 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR 4351

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        +T  V  P+ + +         A G  H +  +  GEV   G
Sbjct: 4352 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWG 4411

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +  G L D    +  RP       V +L G  ++++  G+ H+  ++
Sbjct: 4412 DNDEGQLGDGTVSAIQRP-----RLVQSLQGKHIVKVICGSAHTLALS 4454



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 167/413 (40%), Gaps = 61/413 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            KV  WG     QLG  +      P   + LS L  + +   GG+  L + S      GK+
Sbjct: 3029 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--AGGSKSLFIVSQD----GKL 3082

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++ G G++G+LG G   +   PK V     +      + +G  H+  ++  G +F+ G+G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              G+LGHG+  +   P  + +   K +  IACG  HS  +       ++Y +G G+ G+L
Sbjct: 3143 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3199

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW--------GRG 262
            G   D    +  P++   L D  +V + A G R A    L+ +G +++W        GRG
Sbjct: 3200 G-HGDNCTQLK-PKLVTALQDHRVVQV-ACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG 3256

Query: 263  FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +    +       + +   Q   G    L LT  GEV   G   +  L         +P
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKP 3316

Query: 323  LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                   +  L G KVI +A GA H   VT                          ++  
Sbjct: 3317 -----TPIQGLRGKKVIHVAVGALHCLAVT--------------------------DSGQ 3345

Query: 383  IMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + A S
Sbjct: 3346 VYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNR-----VACGSSHSVAWS 3393



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
           ++++WG GT G+LG G   D+  P L+       V  +A  CG AH L +T       G 
Sbjct: 681 ELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTE-----AGL 735

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            F+WG G  G+LG+   V    P  V         +  + +G   S  ++  G ++T G 
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQVDLPQAS--CVVKVFSGSQFSVALTREGTVYTWGK 793

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHG+      P  V +   K +  +A G+ H L L       ++YG+G     Q
Sbjct: 794 GHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTA---SGELYGWGRNDFQQ 850

Query: 213 L---GVSKDRIRSVSLPQVT 229
           +    V++D I  ++ P +T
Sbjct: 851 ICPECVTRDPI--ITAPILT 868



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 51/239 (21%)

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
            ++G+G   RGQLG +   RI++ +  +    L  I+I G    G+++  A++ +G LY  
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAG----GEQTLYAVTPDGKLYAT 4146

Query: 260  G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
            G       G   T  V  P  + S   +   + A+  G  H L L+ DGEV   G    G
Sbjct: 4147 GYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4206

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             L    R S  RP     + + +L G+ V+ IA G+ HSA +T + H             
Sbjct: 4207 KLGHGNRDSYDRP-----KLIESLSGIGVVDIACGSAHSACITIQGH------------- 4248

Query: 370  PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                         ++TWG G +G+LG G++ DQ+ PK+V     ++     +++ CGSG
Sbjct: 4249 -------------VLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYR----AIDIACGSG 4290



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 118/299 (39%), Gaps = 35/299 (11%)

Query: 66  LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGH 124
           L  V  + C    V  LT   +V+              L H   M +  YP  V    G 
Sbjct: 562 LDQVRQIVCAENCVYILTDSGTVL-------------YLSHAISMTEDNYPAQV---KGL 605

Query: 125 RYTITHISAGW--NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
             TI  ++A     H   ++ SG +++ G G  G+LGHGD  +   P ++++  ++ V  
Sbjct: 606 ECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTG 665

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           + CG  +S  +       ++Y +G G  G+LG      + V      +  H +  V +  
Sbjct: 666 VFCGSSYSAAITA---SGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGC 722

Query: 243 NGDRSAALSAEGHLYTWGRG-FNSTSDVNCP-QSLPSSLSFSQAAL------GWNHVLVL 294
               S  ++  G  + WG G F    + +C   S+P  +   QA+       G    + L
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVAL 782

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           T +G V   G  H G L       S  P     + V  L+G K++ +A G  H   +T 
Sbjct: 783 TREGTVYTWGKGHGGRLGHGNSEHSPVP-----KMVQALEGKKIVDLAVGLAHCLALTA 836



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 135/329 (41%), Gaps = 52/329 (15%)

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            +F WG    GQLG  +      P P       R     I+ G      V+  G L+  G 
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPI--QIAGGEQTLYAVTPDGKLYATGY 4148

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKR 210
            G  G+LG G   S ++P  V S  +  + ++A   G +H L L  D    +V+ +G G+ 
Sbjct: 4149 GAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSD---GEVFSWGEGED 4205

Query: 211  GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------F 263
            G+LG  ++D   S   P++   L  I +V I+     SA ++ +GH+ TWG+G       
Sbjct: 4206 GKLGHGNRD---SYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGH 4262

Query: 264  NSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
              + D   P+ + + L +    +    G    L +T D  V   G   +G L        
Sbjct: 4263 GDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4322

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              P+     K+ +L G+ V ++  G++ S  +T                           
Sbjct: 4323 KVPM-----KIESLAGLGVTKVECGSQFSVALT--------------------------R 4351

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + ++ TWG G++ +LG GNT     PK V
Sbjct: 4352 SGSVYTWGKGDYHRLGHGNTDHVRRPKKV 4380



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 112/284 (39%), Gaps = 51/284 (17%)

Query: 140 FVSDSGCLFTCGD-GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIA-CGMRHSLVLLKD 196
            V    C++   D GT   L H    +  + P +V       V   A C  RH L L   
Sbjct: 568 IVCAENCVYILTDSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALAS- 626

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                VY +GSG  G+LG      +   LP     L D ++ G+      SAA++A G L
Sbjct: 627 --SGDVYSWGSGDGGRLGHGDTSAKE--LPTRIAALADRQVTGVFCGSSYSAAITASGEL 682

Query: 257 YTWGRG------FNSTSDVNCPQSLPSSLSFSQA---ALGWN--HVLVLTGDGEVLMLGG 305
           YTWGRG        ++ D   P +L ++L   +    ALG    H L +T  G     G 
Sbjct: 683 YTWGRGTYGRLGHGNSEDKYVP-TLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGD 741

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
              G L +   V ++ P+ V L + S      V+++ +G++ S  +T             
Sbjct: 742 GDFGKLGNESCVGTSVPVQVDLPQASC-----VVKVFSGSQFSVALT------------- 783

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                            + TWG G  G+LG GN+     PK+V 
Sbjct: 784 -------------REGTVYTWGKGHGGRLGHGNSEHSPVPKMVQ 814


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYCHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++     + V  +A GGAH   +T+      G+++
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITA-----AGELY 4126

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGHG+  D L PK V    G+R       +G   +  ++D   +++ GDG 
Sbjct: 4127 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4186

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 4187 YGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4243

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 4244 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4287



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 153/332 (46%), Gaps = 29/332 (8%)

Query: 53  HDELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV 110
           ++ L PQL+  L+S + V + A   G H LAL++ S     ++FSWG G  G+LGHG+ V
Sbjct: 479 NNTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATS-----ELFSWGCGDGGRLGHGDTV 533

Query: 111 DALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
               PK V+   G +    + HI+ G  +S  ++  G L+T G G +G+LGHG     + 
Sbjct: 534 SLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTV 593

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
           P+ V+      V  ++CG   +  L     G QV+ +G G  G+LG  +        P++
Sbjct: 594 PMLVTGLKGLKVVDVSCGSGDAQTLSVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKL 650

Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLS 280
              L D++IV +      S A++ +G +Y+WG+G N      +   V  P+ +       
Sbjct: 651 IEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKK 710

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
               A+G  H L LT  GEV   G +      D  R++   P       +  LD   ++ 
Sbjct: 711 VVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAKPVP-----SVLPGLDSKHIVG 765

Query: 341 IAAGAEHSAVVTGKFHW---VRL-FIISYTPF 368
           I+ G   S   +    W   +R+ F++   P 
Sbjct: 766 ISCGPAQSFAWSSCSEWSIGLRVPFVVDVCPM 797



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  I+AG
Sbjct: 4060 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDIAAG 4112

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  ++ +G L+T G G +G+LGHGD      P  V +     V  IACG     +L 
Sbjct: 4113 GAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4172

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +  +      S AL+ 
Sbjct: 4173 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTK 4227

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 4228 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4287

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G K+ ++A G+ H+
Sbjct: 4288 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4326



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 18/232 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS------SVSMLACGGAHVLALTSPSSV 88
           +++SWG G  G+LG G       P+L+  S+LS       V  +ACG  +  A+T+    
Sbjct: 515 ELFSWGCGDGGRLGHGDTVSLEEPKLV--SALSGKQTGKQVIHIACGSTYSAAITA---- 568

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G++++WGRG+ G+LGHG   D   P  VT   G +       +G   +  V+++G ++
Sbjct: 569 -DGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVW 627

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + GDG +G+LG G      +P  +    + ++ ++ CG + S+ + KD    QVY +G G
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKD---GQVYSWGKG 684

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              +LG   +    V  P++  GL   ++V ++       AL+  G +Y+WG
Sbjct: 685 DNQRLGHGTE--EHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWG 734



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 19/231 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
            KV++ G  T+G+LG G +     P    +++LS+  V  +A   GG H  ALT     + 
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALT-----VD 3069

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
            G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
              G+LG  +      ++PQ    L+   +  I      S AL+  G ++TW
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 7/156 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V+ + CG    +ALT       G V++
Sbjct: 4179 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTK-----SGAVYT 4233

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 4234 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4291

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            GQLG G   +   P  V++   K ++++ACG  H+L
Sbjct: 4292 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4327



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 66/298 (22%)

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRGQ 212
           ++G LG   Y + S P++  +  N  V Q+AC  +  L+L ++  L  Q Y   +     
Sbjct: 427 SWGLLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNT----- 481

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFN 264
           LG           PQ+  GL    IV I+A  +G    ALSA   L++WG       G  
Sbjct: 482 LG-----------PQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHG 530

Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            T  +  P+ L S+LS  Q        A G  +   +T DGE+   G  ++G L      
Sbjct: 531 DTVSLEEPK-LVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSE 589

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T P+      V+ L G+KV+ ++ G+  +  ++                        +
Sbjct: 590 DQTVPM-----LVTGLKGLKVVDVSCGSGDAQTLS------------------------V 620

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            EN  + +WG G++G+LG G +     PK++   ++ Q+ D  ++V CGS F+ AI++
Sbjct: 621 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDI-VKVRCGSQFSIAITK 674



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 159/396 (40%), Gaps = 68/396 (17%)

Query: 86   SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
            ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 2958 TATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTAEG 3015

Query: 146  CLFTCGDGTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQ 201
             ++ CG+ T G+LG G   S + P+  ++++  N  V ++A   G RH+  L  D    +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVD---GK 3071

Query: 202  VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            V+ +G G  G+LG  S+    +   P++   L    I  I+     SAA+++ G LYTWG
Sbjct: 3072 VFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128

Query: 261  RGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHG 309
             G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    G
Sbjct: 3129 LGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3187

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK--------------- 354
             L          P     + +  L+G  V QI  GA+ S  +T                 
Sbjct: 3188 KLGRGGSEGCNIP-----QNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAV 3242

Query: 355  -FHW----VRLFIISYTPFF-----------PPFFINV--IAENRAIMTWGWGEHGQLGL 396
             F++    + LF+I  +  F             F +N+  I  ++ +  WG  +HGQ G 
Sbjct: 3243 XFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGN 3302

Query: 397  GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
            G T     P +V+ G E Q       V CGS  + A
Sbjct: 3303 GTTTVNRKPTLVH-GLEGQK---ITRVACGSSHSVA 3334



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 154/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4022

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 4023 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4079

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
            + G+LG      RS    P+V   L   E+V I+A G  SA ++A G LYTWG+      
Sbjct: 4080 EDGKLGHGN---RSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRL 4136

Query: 262  GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   + D   P+ + +   +    +    G    L LT D  V   G   +G L      
Sbjct: 4137 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4196

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L GV V ++  G++ S  +T        GK  + RL   S     
Sbjct: 4197 GCKVPM-----KIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4251

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 4252 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4311

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 4312 QGKKINR-----VACGSAHTLAWS 4330



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
            ++++WG G  G+LG G    +L P+++ +     V  +ACG   A  LALT       G 
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE-----GL 3177

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT--- 149
            VFSWG G  G+LG G       P+ +   +G    +  I  G   S  ++ SG ++T   
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ--AVCQIECGAQFSLALTKSGVVWTWXX 3235

Query: 150  ---CGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
               C    F    + +Y      +KVS  FV    +   C     L ++K  +  +VY +
Sbjct: 3236 TKHCLAVXFY---YXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAW 3292

Query: 206  GSGKRGQLG 214
            G    GQ G
Sbjct: 3293 GDNDHGQQG 3301



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 120/282 (42%), Gaps = 51/282 (18%)

Query: 168  SPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
            S +KV SF       NV Q+A G +    +  +    +VY  G    G+LG+      +V
Sbjct: 2982 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTAE---GKVYACGEATNGRLGLGISS-GTV 3037

Query: 224  SLPQVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNC--PQSL 275
             +P+    L +  ++ V + + G  + AL+ +G +++WG G +      S +NC  P+ +
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3097

Query: 276  PS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
             +  +      A G +H   +T  GE+   G   +G L   +  +  +P     + V  L
Sbjct: 3098 EALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKP-----KMVKVL 3152

Query: 334  DGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQ 393
             G +VIQ+A G+  +  +                         + +   + +WG G+ G+
Sbjct: 3153 LGHRVIQVACGSRDAQTL------------------------ALTDEGLVFSWGDGDFGK 3188

Query: 394  LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            LG G +     P+ +    E  N     ++ CG+ F+ A+++
Sbjct: 3189 LGRGGSEGCNIPQNI----ERLNGQAVCQIECGAQFSLALTK 3226



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG   +GQLG G  +    P+L+       ++ +ACG AH LA ++      GK+ 
Sbjct: 4282 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLP 4341

Query: 95   S 95
            S
Sbjct: 4342 S 4342


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 39/298 (13%)

Query: 36  VWSWGAGTDGQLGTGRL--------HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           V++WG GT GQLG G          ++ELSP++L      +++ L  G  H  A+     
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKE-- 64

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              GK+++WG     QLGHG     +   P          I  IS G  H+G V + G L
Sbjct: 65  ---GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKL 121

Query: 148 FTCGDG-----TFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLGN 200
           FT G G       G LGH      S P  V + V++   V  + CG  H++ L KD    
Sbjct: 122 FTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKD---G 178

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +++ +G+G+ G+LG       +  +P+      D  I  ISA  D + A++  G +Y+WG
Sbjct: 179 EIWAWGNGEYGRLGNGAS--DNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWG 236

Query: 261 RGFNS--------TSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
              +S        T D    +++P      S+++ +Q + G++H   +T DG++ M G
Sbjct: 237 INSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 142/332 (42%), Gaps = 27/332 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           K+++WG+    QLG G  + ++   P++++      +  ++CG  H  A+        GK
Sbjct: 66  KLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEE-----GK 120

Query: 93  VFSWGRGSS-----GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           +F+WG G S     G LGH    D   P+ V         +  +  G  H+  ++  G +
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEI 180

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           +  G+G +G+LG+G   +   P  V  F ++N+  I+ G   +  + +     +VY +G 
Sbjct: 181 WAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH---GEVYSWGI 237

Query: 208 GKRGQL----GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
               QL    G++ D     ++P V   L ++ +  +SA  D +AA++ +G ++ WG   
Sbjct: 238 NSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWGAKL 297

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
                     ++    +      G  +   L+  G +   G  H   L   ER +  +PL
Sbjct: 298 WLEPH---EMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPL 354

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
                 V +L+   V+ +  G  H   +T  F
Sbjct: 355 -----LVESLNRYNVVSMTCGYSHMGALTKPF 381



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 159/388 (40%), Gaps = 60/388 (15%)

Query: 93  VFSWGRGSSGQLGHGEM--------VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           VF+WG G+ GQLGHG           + L P+ +  F+G    I  +  G  HS  +   
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKN--IAKLDFGATHSAAIDKE 64

Query: 145 GCLFTCGDGTFGQLGHGDYRS--HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           G L+T G   + QLGHG       S P  V +     +  I+CG  H+  + ++    ++
Sbjct: 65  GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEE---GKL 121

Query: 203 YGFGSG---KRGQLGVSKDRIRSVSLPQVTIGLHD--IEIVGISANGDRSAALSAEGHLY 257
           + +G G    +G   +        S+P++   L D  + +  +      + AL+ +G ++
Sbjct: 122 FTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIW 181

Query: 258 TWGRGF-----NSTSD---VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            WG G      N  SD   V  P    +  + +  + G +    +T  GEV   G + H 
Sbjct: 182 AWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHS 241

Query: 310 MLSDPERVS----STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
            L     ++    +   + V +E +SN   V V Q++AG +H+A VT      ++F+   
Sbjct: 242 QLGLGGGLTVDYYNMETIPVVVEALSN---VNVAQVSAGYDHAAAVTNDG---KMFMWGA 295

Query: 366 TPFFPPFFINVIAENRAI------------------MTWGWGEHGQLGLGNTCDQIHPKV 407
             +  P  + ++ +   I                   T+G G    LG G    Q+ P +
Sbjct: 296 KLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLL 355

Query: 408 VNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           V    E  NR   + + CG     A+++
Sbjct: 356 V----ESLNRYNVVSMTCGYSHMGALTK 379



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 57/280 (20%)

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKNVHQIACGMRHSLV 192
           +S    +FT G GT GQLGHG +            SP  + +F  KN+ ++  G  HS  
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           + K+    ++Y +GS +  QLG         S+P+V   L  I+IV IS     + A+  
Sbjct: 61  IDKE---GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDE 117

Query: 253 EGHLYTWGRGFNSTS-----------DVNCPQSLPS----SLSFSQAALGWNHVLVLTGD 297
           EG L+TWG G ++             D + P+ + +     +       G  H + LT D
Sbjct: 118 EGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKD 177

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
           GE+   G   +G L +    +   P     E V       +  I+AG +           
Sbjct: 178 GEIWAWGNGEYGRLGNGASDNFEVP-----EPVEYFADENIASISAGRD----------- 221

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG 397
                          F   I E+  + +WG   H QLGLG
Sbjct: 222 ---------------FTFAITEHGEVYSWGINSHSQLGLG 246


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYCHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
                  + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G + +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GRL   + +PQL+   S   +  ++ G AH +AL+     + G +
Sbjct: 397 ELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALS-----MSGNI 451

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWGR   GQLG G      +P  +   D  +  +  ++ G +H+  ++  G +FT G G
Sbjct: 452 YSWGRNDLGQLGLGHTNGEDFPSLIEALDNQK--VEFLACGGSHTALLTKDGLVFTFGAG 509

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH   ++   P  V+      V Q+ACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 510 KYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSD-LG-KVFSFGSGKEGQL 567

Query: 214 GVSKDRIRSVSLP 226
           G      + + LP
Sbjct: 568 GNGGTHNQLIPLP 580



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 28/267 (10%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
            S+  + CG  H LAL+      GG++F+WG+   GQLG G +  ++  P+ V    G  
Sbjct: 377 KSIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSG-- 429

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG  HS  +S SG +++ G    GQLG G       P  + +  N+ V  +AC
Sbjct: 430 VPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLAC 489

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  H+ +L KD L   V+ FG+GK GQLG   +++ +R    P++   L    +  ++  
Sbjct: 490 GGSHTALLTKDGL---VFTFGAGKYGQLGHNSTQNELR----PRLVTELAGNRVTQVACG 542

Query: 244 GDRSAALSAE-GHLYTWGRGFNS--------TSDVNCPQSLPSS--LSFSQAALGWNHVL 292
              + A  ++ G ++++G G              +  P  LPS+  L F         ++
Sbjct: 543 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIM 602

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSS 319
           +  G+  +L+  G  +  ++   R+ +
Sbjct: 603 IAGGNQSILLWMGKKNPYVNLRRRIPT 629



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 48/264 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K++ QI CG  HSL L K   G +++ +G    GQLGV +    S+  PQ+   L  + +
Sbjct: 377 KSIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-LFTSIPTPQLVEHLSGVPL 432

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
           V ISA    S ALS  G++Y+WGR      G   T+  + P SL  +L   +    A G 
Sbjct: 433 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFP-SLIEALDNQKVEFLACGG 491

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG V   G   +G L      +  RP       V+ L G +V Q+A G  H+
Sbjct: 492 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRP-----RLVTELAGNRVTQVACGRWHT 546

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T +Q+ P  +
Sbjct: 547 -------------------------LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 581

Query: 409 NLGD----EFQNRDTQLEVFCGSG 428
            L      +F++R ++ E+   +G
Sbjct: 582 KLPSNEELKFESRTSEKELIMIAG 605



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG     +EL P+L+   + + V+ +ACG  H LA  S      GKVFS
Sbjct: 503 VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDL----GKVFS 558

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTF 120
           +G G  GQLG+G   + L P P+  
Sbjct: 559 FGSGKEGQLGNGGTHNQLIPLPMKL 583



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 103/267 (38%), Gaps = 69/267 (25%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +H +  G  H L+L  D           GK  +   S +  R   +      L +  I+
Sbjct: 338 KIHSVDQGAEHMLILSSD-----------GKPFEYNYSIEHARFQCI------LQEKSII 380

Query: 239 GISANGDRSAALSAEGHLYTWGRGFNST-------SDVNCPQSLP--SSLSFSQAALGWN 289
            I+     S ALS  G L+ WG+  +         + +  PQ +   S +   Q + G  
Sbjct: 381 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKA 440

Query: 290 HVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
           H + L+  G +   G +  G L    ++ E   S          +  LD  KV  +A G 
Sbjct: 441 HSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSL---------IEALDNQKVEFLACGG 491

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            H+A++T                          ++  + T+G G++GQLG  +T +++ P
Sbjct: 492 SHTALLT--------------------------KDGLVFTFGAGKYGQLGHNSTQNELRP 525

Query: 406 KVVNLGDEFQNRDTQLEVFCGSGFTYA 432
           ++V   +   NR TQ  V CG   T A
Sbjct: 526 RLVT--ELAGNRVTQ--VACGRWHTLA 548


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCNKQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 146/330 (44%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    +++WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S   + F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCNKQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQLG G   + + SPQL+   SL+ +  +  A GGAH   LT     + G
Sbjct: 157 EVFSWGQNKYGQLGLGIDCNKQASPQLI--KSLTGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F+ G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFSWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D    +SP  + S       Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V++WG  +DGQLG  G       P+  N+ SLS + +  +ACG  H LAL+  S     
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLALSKAS----- 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G +      P+ +    G  +    ++AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPF--MQVAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S   + +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 567

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 146/329 (44%), Gaps = 38/329 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG    GQLG G L D  +P  ++L   ++V+ +A GG H +ALTS      G V 
Sbjct: 108 TVLAWGTNHFGQLGDGTLIDRSAPVEVSLPPGTTVTAVAAGGVHSMALTSV-----GTVL 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G       P       G   T+T ++A  +HS  V+ +G     G   
Sbjct: 163 AWGGNGVGQLGDGSTTRRTTPVEAILPSG--VTVTAVAAAESHSLAVTSAGAALAWGLNG 220

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   + S+PV V+  +   V  IA G  HSL +           +G    GQLG
Sbjct: 221 TGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSV---GAALAWGYNGTGQLG 277

Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------- 263
               +++    SV+LP         E+  + A    SAAL+  G    WG          
Sbjct: 278 DGTTINRSTPVSVALPL------GAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNG 331

Query: 264 ---NSTSDVNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
              NS+  V    SLP+  + +  A+   +H + + GDG  L  G +  G L D    + 
Sbjct: 332 GGSNSSEAVEV--SLPTGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNP 389

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           + P+ VAL       G+ ++  AAG++H+
Sbjct: 390 STPVPVALPT-----GITLLTTAAGSDHT 413



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 120/268 (44%), Gaps = 20/268 (7%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + +WG+  +GQLG+G    +  P  V+   G   T+T ++AG  HS  ++ +G +   G 
Sbjct: 57  LLAWGKNDNGQLGNGSTTGSNVPIAVSLPLG--TTVTAVAAGRFHSLALTSAGTVLAWGT 114

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             FGQLG G     S+PV+VS      V  +A G  HS+ L        V  +G    GQ
Sbjct: 115 NHFGQLGDGTLIDRSAPVEVSLPPGTTVTAVAAGGVHSMALTSV---GTVLAWGGNGVGQ 171

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
           LG      R+   P   I    + +  ++A    S A+++ G    WG       G  ST
Sbjct: 172 LGDGSTTRRTT--PVEAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGST 229

Query: 267 SDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            + + P S  LP     +  A G  H L +T  G  L  G +  G L D   ++ + P+S
Sbjct: 230 INRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVS 289

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           VAL       G +V  + AG  HSA +T
Sbjct: 290 VALPL-----GAEVTAVVAGRLHSAALT 312



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 111/276 (40%), Gaps = 52/276 (18%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           L   G    GQLG+G     + P+ VS  +   V  +A G  HSL L        V  +G
Sbjct: 57  LLAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTS---AGTVLAWG 113

Query: 207 SGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-- 260
           +   GQLG    + +     VSLP  T       +  ++A G  S AL++ G +  WG  
Sbjct: 114 TNHFGQLGDGTLIDRSAPVEVSLPPGT------TVTAVAAGGVHSMALTSVGTVLAWGGN 167

Query: 261 ----RGFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                G  ST+    P    LPS ++ +  A   +H L +T  G  L  G +  G L D 
Sbjct: 168 GVGQLGDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDG 227

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
             ++ + P+SVAL       G +V  IAAG  HS  VT                      
Sbjct: 228 STINRSTPVSVALPL-----GTEVTAIAAGRLHSLAVT---------------------- 260

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                  A + WG+   GQLG G T ++  P  V L
Sbjct: 261 ----SVGAALAWGYNGTGQLGDGTTINRSTPVSVAL 292



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 75/209 (35%), Gaps = 60/209 (28%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG    GQLG G   +  +P  + L   + V+ +A G  H LA+TS      G   +WG
Sbjct: 215 AWGLNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSV-----GAALAWG 269

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT-------- 149
              +GQLG G  ++   P  V    G    +T + AG  HS  ++ +G            
Sbjct: 270 YNGTGQLGDGTTINRSTPVSVALPLGAE--VTAVVAGRLHSAALTTAGTALAWGDNGFGQ 327

Query: 150 -------------------------------------CGDGT--------FGQLGHGDYR 164
                                                 GDGT        FGQLG G   
Sbjct: 328 LGNGGGSNSSEAVEVSLPTGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTT 387

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           + S+PV V+      +   A G  H+L L
Sbjct: 388 NPSTPVPVALPTGITLLTTAAGSDHTLAL 416


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R +I  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L +   SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 172/419 (41%), Gaps = 69/419 (16%)

Query: 39  WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G +  L   ++ PQ+    S  S+  +ACGG H + L        G+V++ 
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 59  GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C   L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+                         + ++  +  I  +
Sbjct: 286 -RRVLELMGSEVTQIACGRQHT-------------------------LALVPSSGLIYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           G G  GQLG G+TC+   P  V               D F+ R  + ++F G   T+ +
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVK-QIFSGGDQTFVL 377



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L L+       +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L L    G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 66/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  + D + P+ V    G    +T I+ G  H+   V  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 KGQLGTG----HTCNVKCPSPVK 342


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYCHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 189/434 (43%), Gaps = 85/434 (19%)

Query: 36  VWSWGA---------GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           V+ WG          GT  Q+     +D L+P+ L  + +  V  +ACG  H+  +T   
Sbjct: 228 VYVWGEIWTDLVLPDGTSSQIPVK--NDVLTPKPLETNVVLDVQQIACGVRHIALVTR-- 283

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI---SAGWNHSGFVSD 143
               G+VF+WG    G+LGHG   D   P  V F       ++H+   + G  H+  ++ 
Sbjct: 284 ---QGEVFTWGEECGGRLGHGIDRDFSRPHLVEFL-----AVSHVDFVACGEYHTCAITS 335

Query: 144 SGCLFTCGDGTF--GQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           S  L+T GDG F  G LGHG   SH  P +V  S     V  +ACG  HS +   +    
Sbjct: 336 SNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSN---G 392

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANGDRSAALSAEG-- 254
           ++Y FG G  G LG   DR  SV  P   Q+  GL  I++  G+         +S  G  
Sbjct: 393 KLYTFGDGTYGVLG-HGDR-ESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSN 450

Query: 255 ----HLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLM 302
                L+TWG G          ++  LP+ +S      F Q A G N  + LT  G V  
Sbjct: 451 MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFT 510

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
           +GG+ +G L +P   SS   +   ++    L G  V +I+ GA H+ V+T +        
Sbjct: 511 MGGTAYGQLGNP---SSDGVIPCLVQ--DRLVGEFVEEISCGAYHTVVLTSR-------- 557

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
                               + +WG G +G+LG G+  D+  P ++   +  ++R  +  
Sbjct: 558 ------------------NEVFSWGRGSNGRLGHGDVEDRKAPTLI---EALKDRHVK-S 595

Query: 423 VFCGSGFTYAISRH 436
           + CGS FT +I  H
Sbjct: 596 ISCGSNFTASICIH 609



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 27/295 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P L+   ++S V  +ACG  H  A+TS        ++
Sbjct: 286 EVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITS-----SNDLY 340

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  +SG LGHG  +    PK V    +G    +  ++ G  HS   + +G L+T G
Sbjct: 341 TWGDGIFNSGILGHGTDISHWIPKRVVGSLEG--LQVLSVACGTWHSALATSNGKLYTFG 398

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGT+G LGHGD  S   P +V         ++ACG+ H+  +++       +    +++ 
Sbjct: 399 DGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFT 458

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----W 259
           +G G + +LG       +  LP     L D     ++   + + AL+  GH++T     +
Sbjct: 459 WGDGDKYRLGHGNK--ETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAY 516

Query: 260 GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G+  N +SD   P  +   L      + + G  H +VLT   EV   G   +G L
Sbjct: 517 GQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRL 571



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 7/152 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   LACG    +ALT+      G VF
Sbjct: 455 KLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT-----SGHVF 509

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG+    D + P  V       + +  IS G  H+  ++    +F+ G G+
Sbjct: 510 TMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEF-VEEISCGAYHTVVLTSRNEVFSWGRGS 567

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
            G+LGHGD     +P  + +  +++V  I+CG
Sbjct: 568 NGRLGHGDVEDRKAPTLIEALKDRHVKSISCG 599


>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
           and BTB (POZ) domain containing protein 1 [Ciona
           intestinalis]
          Length = 554

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 22/266 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG  +  QLG G      SP LL+ +  + V  +ACG  H +ALT+      G+V++
Sbjct: 120 VYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTE-----GEVYT 174

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQ+G G   +   P+ VT   G++  I  I+ G   S  V+DSG +++ G    
Sbjct: 175 WGYNNCGQIGSGSTANQGSPRKVTACIGNK-RIIDITCGQTTSLCVTDSGEVYSWGYNGN 233

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G+  + ++P +V++     + Q+ CG  H+L L  + +   V+G+G+   GQLG 
Sbjct: 234 GQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGV---VFGWGANSYGQLG- 289

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
           S ++  + +  QV   +  +  +  +     SAA +  GH+Y WG+     +    P+  
Sbjct: 290 SGNKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWGQLRQQAT----PEPK 345

Query: 276 PSSLS--------FSQAALGWNHVLV 293
           P++ +        FS   + W  ++V
Sbjct: 346 PTNFTDLNAVFAGFSSPPVSWRAMIV 371



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 15/244 (6%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTC 150
           KV+S G  +SG LG G+   +L P+ +  F G +  I  +SAG   H   ++  G +++ 
Sbjct: 66  KVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQK--IISLSAGSGPHVLVLTQDGGVYSW 123

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G  ++ QLG+G     +SP  +S  ++  V QIACG  HS+ L  +    +VY +G    
Sbjct: 124 GHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTE---GEVYTWGYNNC 180

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
           GQ+G S       S  +VT  + +  I+ I+     S  ++  G +Y+WG   N    V 
Sbjct: 181 GQIG-SGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVG 239

Query: 270 -NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            N  Q+ P  ++       +Q   G+ H L LT +G V   G + +G L    + ++  P
Sbjct: 240 NNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTP 299

Query: 323 LSVA 326
           L VA
Sbjct: 300 LQVA 303



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 106/269 (39%), Gaps = 46/269 (17%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM-RHSLVLLKDCLGNQVYGF 205
           +++ G  T G LG GD  S   P  + SF  + +  ++ G   H LVL +D     VY +
Sbjct: 67  VYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQD---GGVYSW 123

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G     QLG         + P +       ++V I+     S AL+ EG +YTWG     
Sbjct: 124 GHNSYMQLG--NGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCG 181

Query: 262 --GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
             G  ST++   P+ + + +   +      G    L +T  GEV   G + +G L     
Sbjct: 182 QIGSGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNN 241

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
           V+ T P  VA      L GV + Q+  G  H+  +T                        
Sbjct: 242 VNQTNPCRVAA-----LQGVVIAQVVCGYAHALALT------------------------ 272

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
             +N  +  WG   +GQLG GN  +   P
Sbjct: 273 --DNGVVFGWGANSYGQLGSGNKANTCTP 299



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 31/119 (26%)

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           HVLVLT DG V   G + +  L +      T P S+    +SN    KV+QIA G+ HS 
Sbjct: 110 HVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSP-SLLSRNISN----KVVQIACGSHHSM 164

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +T +                            + TWG+   GQ+G G+T +Q  P+ V
Sbjct: 165 ALTTE--------------------------GEVYTWGYNNCGQIGSGSTANQGSPRKV 197


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 56/361 (15%)

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G K+  WG  S G  G    V  +  +P T    H  ++  ++ G NHS F+ + G ++T
Sbjct: 57  GKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYT 116

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           CG  T GQLGH   +  S P ++ +  ++++  +ACG  HSL L       +++ +G+G 
Sbjct: 117 CGVNTKGQLGHE--KEGSKPEQIGALADQHIIHVACGESHSLALSDQ---GRLFSWGAGS 171

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
            GQLG++     SV++P++   L+   I+ +S       AL+A+G  + WG+  NS   +
Sbjct: 172 DGQLGLTTTE-DSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQ--NSHGQL 228

Query: 270 NCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              +  PS  S            +Q A G  H   L+  G V   G +  G L   +   
Sbjct: 229 GLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQD 288

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P  V L +       KV+ I+ G++H+AV+T                          
Sbjct: 289 RESPCHVKLLRTQ-----KVVYISCGSDHTAVLT-------------------------- 317

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYA 432
           +   + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA
Sbjct: 318 KTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYA 377

Query: 433 I 433
            
Sbjct: 378 F 378



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 216 QFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 270

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ +SGQLG  +  D   P  V      +  + +IS G +H+  ++ +G +FT G G
Sbjct: 271 FGWGKNTSGQLGLSDEQDRESPCHVKLLRTQK--VVYISCGSDHTAVLTKTGGVFTFGAG 328

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH  +    +P +V   +   V QIACG +H+L  +       +Y FG G +GQL
Sbjct: 329 SCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPS--SGLIYAFGCGIKGQL 386

Query: 214 G 214
           G
Sbjct: 387 G 387



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 21/247 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWGAG+DGQLG     D ++ P+L+   +   +  ++CG  H LAL +      G+ 
Sbjct: 163 RLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAA-----DGQF 217

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG+ S GQLG G E      P+ V   DG    +  ++AG  HS  +S SG +F  G 
Sbjct: 218 FAWGQNSHGQLGLGKEFPSQASPQRVKSLDG--IPLAQVAAGGAHSFALSLSGAVFGWGK 275

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            T GQLG  D +   SP  V     + V  I+CG  H+ VL K      V+ FG+G  GQ
Sbjct: 276 NTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKT---GGVFTFGAGSCGQ 332

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFNS------ 265
           LG   D       P+  + L   E+  I+     + A + + G +Y +G G         
Sbjct: 333 LG--HDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGH 390

Query: 266 TSDVNCP 272
           T ++ CP
Sbjct: 391 TCNLKCP 397



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 161/387 (41%), Gaps = 56/387 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           K+  WG  + G  GT        L P+        SV  +ACGG H + L        G+
Sbjct: 59  KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLE-----DGE 113

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V++ G  + GQLGH +  +   P+ +    D H   I H++ G +HS  +SD G LF+ G
Sbjct: 114 VYTCGVNTKGQLGHEK--EGSKPEQIGALADQH---IIHVACGESHSLALSDQGRLFSWG 168

Query: 152 DGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+ GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    
Sbjct: 169 AGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAAD---GQFFAWGQNSH 225

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           GQLG+ K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG+      G +
Sbjct: 226 GQLGLGKE-FPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLS 284

Query: 265 STSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
              D   P    L  +      + G +H  VLT  G V   G    G L          P
Sbjct: 285 DEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNP 344

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
                 +V  L G +V QIA G +H+              +++ P            +  
Sbjct: 345 -----RRVLELMGSEVSQIACGRQHT--------------LAFVP-----------SSGL 374

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           I  +G G  GQLG G+TC+   P  V 
Sbjct: 375 IYAFGCGIKGQLGSGHTCNLKCPSPVK 401


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 149/321 (46%), Gaps = 37/321 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG  +DGQLG G   +   P  + ++ LS    +A G  H LA+      + G V++
Sbjct: 153 VWAWGWNSDGQLGDGTTRERHVP--VQVAGLSGGVKVAAGDGHSLAV-----CLDGTVWA 205

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR  SGQLG G  V    P  V    G    +  ++AG +HS  V   G ++  G  + 
Sbjct: 206 WGRNDSGQLGDGTTVQRSAPVQVAGLSG----VVAVAAGSSHSLAVRSDGTVWAWGRNSD 261

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   +  +PV+V+         +A GM HSL +  D     V+ +G   RGQLG 
Sbjct: 262 GQLGDGTTSARLTPVQVTGLSGGVA--VAAGMFHSLAVRSD---GTVWAWGQNTRGQLG- 315

Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
             D   + SL P   IGL + E V  +A    S    ++G ++ WG      RG  S   
Sbjct: 316 --DGSMTASLTPVQAIGLSEGEAV--AAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKT 371

Query: 269 VNCP-QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              P Q    S  F+ AA G  H L +  DG V   G +  G L D  R+  T P+    
Sbjct: 372 STAPVQVTALSGGFTVAA-GKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPV---- 426

Query: 328 EKVSNLDGVKVIQIAAGAEHS 348
            +V+ L G   + +AAG +HS
Sbjct: 427 -QVTGLSG--GVAVAAGDDHS 444



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 169/404 (41%), Gaps = 65/404 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG   +GQ G G      +P  + +++LS    +A G AH LA+ S      G V++
Sbjct: 353 VWAWGNNIEGQRGDGSAKTSTAP--VQVTALSGGFTVAAGKAHALAVRSD-----GTVWA 405

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+   GQLG G  +    P  VT   G       ++AG +HS  +   G ++  G  T 
Sbjct: 406 WGQNLFGQLGDGTRMQRTAPVQVTGLSGG----VAVAAGDDHSLGLCLDGTVWAWGQNTS 461

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G      +PV+V+      V  +A G  HSL +  D     V+ +GS   GQLG 
Sbjct: 462 GQLGDGTTAQRPAPVQVTEL--SGVVAVAAGTSHSLAVSSD---GTVWAWGSNASGQLGD 516

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
              R R    P    GL  +  V ++A    S A+ ++G ++ WG       G  + +  
Sbjct: 517 GTTRARLT--PVQVAGLSGV--VAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQR 572

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P  +P       AA G+ H LVL  DG V   G + +G L +    +S  P+     +
Sbjct: 573 PTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPV-----Q 627

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           V+ L G   + +AAG                           F    +  +  +  WG  
Sbjct: 628 VTGLSGG--VAVAAG--------------------------DFQSLAVRSDGTVRAWGDN 659

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            +GQLG G    ++ P  VN           + V  G+GF+ A+
Sbjct: 660 IYGQLGDGTVTTRLAPVGVN------GLSGGMAVAAGNGFSLAV 697



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 159/378 (42%), Gaps = 63/378 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G      +P  + ++ LS V  +A G +H LA+ S      G V++
Sbjct: 203 VWAWGRNDSGQLGDGTTVQRSAP--VQVAGLSGVVAVAAGSSHSLAVRSD-----GTVWA 255

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR S GQLG G     L P  VT   G       ++AG  HS  V   G ++  G  T 
Sbjct: 256 WGRNSDGQLGDGTTSARLTPVQVTGLSGG----VAVAAGMFHSLAVRSDGTVWAWGQNTR 311

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
           GQLG G   +  +PV+           +A G  HSLV   D     V+ +G+   GQ   
Sbjct: 312 GQLGDGSMTASLTPVQAIGLSEGEA--VAAGETHSLVARSD---GTVWAWGNNIEGQRGD 366

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSD-VNC 271
           G +K     V +  ++ G        ++A    + A+ ++G ++ WG+  F    D    
Sbjct: 367 GSAKTSTAPVQVTALSGGFT------VAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRM 420

Query: 272 PQSLP---SSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            ++ P   + LS   A A G +H L L  DG V   G +  G L D    ++ RP  V +
Sbjct: 421 QRTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDG--TTAQRPAPVQV 478

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            ++S      V+ +AAG  HS  V+                           +  +  WG
Sbjct: 479 TELSG-----VVAVAAGTSHSLAVS--------------------------SDGTVWAWG 507

Query: 388 WGEHGQLGLGNTCDQIHP 405
               GQLG G T  ++ P
Sbjct: 508 SNASGQLGDGTTRARLTP 525



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 125/294 (42%), Gaps = 26/294 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+ G+ T GQLG G   +   P    +  LS   ++A G +H LA+ S      G  ++
Sbjct: 53  VWAAGSNTSGQLGDGTTSERRVPA--QVVGLSDAVLVAAGSSHSLAIRSD-----GTAWA 105

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   SG+LG G       P  VT           ++AG  HS  V   G ++  G  + 
Sbjct: 106 WGHNGSGELGDGTTFRRTRPVQVTGLS----EAEAVAAGDGHSLVVRSDGTVWAWGWNSD 161

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G  R    PV+V+        ++A G  HSL +   CL   V+ +G    GQLG 
Sbjct: 162 GQLGDGTTRERHVPVQVAGLSGG--VKVAAGDGHSLAV---CLDGTVWAWGRNDSGQLGD 216

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                RS   P    GL    +V ++A    S A+ ++G ++ WGR      G  +TS  
Sbjct: 217 GTTVQRSA--PVQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSAR 272

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             P  +         A G  H L +  DG V   G +  G L D    +S  P+
Sbjct: 273 LTPVQVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTPV 326



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 163/398 (40%), Gaps = 53/398 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            W+WG    G+LG G       P  + ++ LS    +A G  H L + S      G V++
Sbjct: 103 AWAWGHNGSGELGDGTTFRRTRP--VQVTGLSEAEAVAAGDGHSLVVRSD-----GTVWA 155

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  S GQLG G   +   P  V    G       ++AG  HS  V   G ++  G    
Sbjct: 156 WGWNSDGQLGDGTTRERHVPVQVAGLSGG----VKVAAGDGHSLAVCLDGTVWAWGRNDS 211

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
           GQLG G     S+PV+V+      V  +A G  HSL +  D     V+ +G    GQL  
Sbjct: 212 GQLGDGTTVQRSAPVQVAGL--SGVVAVAAGSSHSLAVRSD---GTVWAWGRNSDGQLGD 266

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G +  R+  V +  ++ G      V ++A    S A+ ++G ++ WG+   +T       
Sbjct: 267 GTTSARLTPVQVTGLSGG------VAVAAGMFHSLAVRSDGTVWAWGQ---NTRGQLGDG 317

Query: 274 SLPSSLSFSQA---------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           S+ +SL+  QA         A G  H LV   DG V   G +  G   D    +ST P+ 
Sbjct: 318 SMTASLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQ 377

Query: 325 V-ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
           V AL     +   K   +A  ++ +    G+  + +L   +      P  +  ++   A+
Sbjct: 378 VTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLSGGVAV 437

Query: 384 MT--------------WGWGEH--GQLGLGNTCDQIHP 405
                           W WG++  GQLG G T  +  P
Sbjct: 438 AAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAP 475



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 120/288 (41%), Gaps = 31/288 (10%)

Query: 70  SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
           S LA GG+H LA+        G V++ G  +SGQLG G   +   P  V           
Sbjct: 35  SRLAAGGSHSLAIRPD-----GTVWAAGSNTSGQLGDGTTSERRVPAQVVGLS----DAV 85

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            ++AG +HS  +   G  +  G    G+LG G     + PV+V+         +A G  H
Sbjct: 86  LVAAGSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRTRPVQVTGL--SEAEAVAAGDGH 143

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           SLV+  D     V+ +G    GQLG    R R V  P    GL     V ++A    S A
Sbjct: 144 SLVVRSD---GTVWAWGWNSDGQLGDGTTRERHV--PVQVAGLSG--GVKVAAGDGHSLA 196

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           +  +G ++ WGR      G  +T   + P  +         A G +H L +  DG V   
Sbjct: 197 VCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAW 256

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           G +  G L D    +   P+     +V+ L G   + +AAG  HS  V
Sbjct: 257 GRNSDGQLGDGTTSARLTPV-----QVTGLSG--GVAVAAGMFHSLAV 297



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 127/310 (40%), Gaps = 52/310 (16%)

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
           + ++AG +HS  +   G ++  G  T GQLG G       P +V    +  +  +A G  
Sbjct: 35  SRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVL--VAAGSS 92

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD- 245
           HSL +  D      + +G    G+L  G +  R R V   QVT GL + E V   A GD 
Sbjct: 93  HSLAIRSD---GTAWAWGHNGSGELGDGTTFRRTRPV---QVT-GLSEAEAV---AAGDG 142

Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
            S  + ++G ++ WG       G  +T + + P  +       + A G  H L +  DG 
Sbjct: 143 HSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGGVKVAAGDGHSLAVCLDGT 202

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FH 356
           V   G +  G L D   V  + P+ VA      L G  V+ +AAG+ HS  V      + 
Sbjct: 203 VWAWGRNDSGQLGDGTTVQRSAPVQVA-----GLSG--VVAVAAGSSHSLAVRSDGTVWA 255

Query: 357 WVR-----LFIISYTPFFPPFFINVIAENRAIMT--------------WGWGEH--GQLG 395
           W R     L   + +    P  +  ++   A+                W WG++  GQLG
Sbjct: 256 WGRNSDGQLGDGTTSARLTPVQVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLG 315

Query: 396 LGNTCDQIHP 405
            G+    + P
Sbjct: 316 DGSMTASLTP 325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 16/179 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG  +  QLG G   +   P  + +  LS     A G  H L L S      G V+ 
Sbjct: 553 VWAWGNNSFFQLGDGT--NTQRPTPVRVPGLSGGVAAAAGYFHSLVLRSD-----GTVWG 605

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG+G    +  P  VT   G       ++AG   S  V   G +   GD  +
Sbjct: 606 WGNNAYGQLGNGTANASFSPVQVTGLSGG----VAVAAGDFQSLAVRSDGTVRAWGDNIY 661

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G   +  +PV V+         +A G   SL +     G  ++ +G    GQLG
Sbjct: 662 GQLGDGTVTTRLAPVGVNGLSGG--MAVAAGNGFSLAVHS---GGMLHAWGYNTDGQLG 715



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 55/126 (43%), Gaps = 11/126 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG    GQLG G  +   SP  + ++ LS    +A G    LA+ S      G V +
Sbjct: 603 VWGWGNNAYGQLGNGTANASFSP--VQVTGLSGGVAVAAGDFQSLAVRSD-----GTVRA 655

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G +   L P  V    G       ++AG   S  V   G L   G  T 
Sbjct: 656 WGDNIYGQLGDGTVTTRLAPVGVNGLSGGMA----VAAGNGFSLAVHSGGMLHAWGYNTD 711

Query: 156 GQLGHG 161
           GQLGHG
Sbjct: 712 GQLGHG 717


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
                  + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G + +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 149/325 (45%), Gaps = 22/325 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG+G  G+LG     +E  P+L+      ++  ++ GG H+ A+        G ++ 
Sbjct: 112 VYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKD-----GHLYC 166

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR +S   G  E V    P+ +   D  +  +  +S G +H+  V++ G ++T G+G  
Sbjct: 167 WGRAASAGSGGTEHV--FIPRLIKG-DLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LGHG+  S   P KV S   K V  +ACG   ++ + +  L    Y  G+   GQLG+
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEKVV-DVACGRDFTIFVCESGL----YSCGADDYGQLGL 278

Query: 216 SKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVN 270
            +    R V  P+   G    ++V ISA      AL  +G +YTWG G           +
Sbjct: 279 GRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKAD 338

Query: 271 CPQSLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           C  + P     +    Q A G  H   +T DG +   G    G L     + S      +
Sbjct: 339 CSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASYRTS 398

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVV 351
             +V++L    V+ +  G++HSAV+
Sbjct: 399 PVQVTSLPAGAVLYVTLGSDHSAVL 423



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 86/171 (50%), Gaps = 19/171 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL---SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++S GA   GQLG GR H E    +P+ L+ + LS V  ++ G  HV AL        G 
Sbjct: 265 LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRD-----GL 319

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WG G  GQLGHGE  D    KPV       + I  ++ G  H+  V+  G L+T G 
Sbjct: 320 VYTWGLGREGQLGHGEKADCSLAKPVDNL--RNFEIVQVACGGGHTAAVTKDGVLYTWGR 377

Query: 153 GTFGQLGHG-------DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           G  GQLG G        YR+  SPV+V+S     V  +  G  HS VL +D
Sbjct: 378 GRDGQLGRGGELESIASYRT--SPVQVTSLPAGAVLYVTLGSDHSAVLCQD 426



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 62/348 (17%)

Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
           GQLG G    A  P PV    G R  I +++AG + +  +S  G ++T G G +G+LGH 
Sbjct: 69  GQLGQGHERPADRPFPVEALSGKR--IVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHN 126

Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
           D  + + P  V +   KN+ +++ G  H   + KD     +Y +G       G ++    
Sbjct: 127 DDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKD---GHLYCWGRAASAGSGGTE---- 179

Query: 222 SVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGF---------NSTSDVNC 271
            V +P++  G L   +++ +S     +AA++ +G ++TWG G+         NS      
Sbjct: 180 HVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKK 239

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVAL 327
            QSL   +     A G +  + +   G +   G   +G L    S  ER   T P S++ 
Sbjct: 240 VQSLTEKV--VDVACGRDFTIFVCESG-LYSCGADDYGQLGLGRSHGERFVQT-PRSLSG 295

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
             +S+     V+ I+AG  H                          +  +  +  + TWG
Sbjct: 296 TGLSD-----VVAISAGDYH--------------------------VCALGRDGLVYTWG 324

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            G  GQLG G   D    K V   D  +N +  ++V CG G T A+++
Sbjct: 325 LGREGQLGHGEKADCSLAKPV---DNLRNFEI-VQVACGGGHTAAVTK 368



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 17/184 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VW+WG G +G+LG G  + +  P+ +  S    V  +ACG    + +          ++
Sbjct: 214 EVWTWGNGYEGELGHGEKNSQYQPKKVQ-SLTEKVVDVACGRDFTIFVCESG------LY 266

Query: 95  SWGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           S G    GQLG    HGE        P +        +  ISAG  H   +   G ++T 
Sbjct: 267 SCGADDYGQLGLGRSHGER---FVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTW 323

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G G  GQLGHG+    S    V +  N  + Q+ACG  H+  + KD +   +Y +G G+ 
Sbjct: 324 GLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGV---LYTWGRGRD 380

Query: 211 GQLG 214
           GQLG
Sbjct: 381 GQLG 384



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 94/244 (38%), Gaps = 47/244 (19%)

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
           FG    GQLG   +R      P     L    IV ++A    +AA+S +G +YTWG G  
Sbjct: 63  FGLNLIGQLGQGHERPADRPFP--VEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEY 120

Query: 263 ----FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
                N  S+ N P+ + +    +  + ++G NH+  +  DG +   G +        E 
Sbjct: 121 GKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAASAGSGGTEH 180

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
           V   R +   LEK       KVI ++ G  H+A VT                        
Sbjct: 181 VFIPRLIKGDLEKE------KVISVSCGRSHTAAVT------------------------ 210

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
             E   + TWG G  G+LG G    Q  PK V    E       ++V CG  FT  +   
Sbjct: 211 --EKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTE-----KVVDVACGRDFTIFVCES 263

Query: 437 CLPS 440
            L S
Sbjct: 264 GLYS 267


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q++CG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSK---ASEVFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 146/330 (44%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV +S     S ALS    +++WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 90/183 (49%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFSWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 138/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  +S G+ HS  +S +  +F+ G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVSCGYYHSLALSKASEVFSWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V++WG  +DGQLG  G       P+  N+ SLS + +  ++CG  H LAL+  S     
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVSCGYYHSLALSKAS----- 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G +      P+ +    G  +    ++AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 138/293 (47%), Gaps = 27/293 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP---QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +VW+WG  + GQLG G  ++  SP   + +  + L ++   ACGG H LA+ S      G
Sbjct: 130 EVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASD-----G 184

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            V++WG  S GQ+G G + +   P+ V  F      +  ++AG+ HS  +S  G ++  G
Sbjct: 185 TVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWG 244

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNK---NVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           D  FGQLG        +PV+V   V++   NV  IA G   SL L +D    +V+ +G+ 
Sbjct: 245 DNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRD---GEVWAWGNN 301

Query: 209 KRGQLGVSKDR--IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW------- 259
             GQLG+      +R     +   G+    +  I+ANG  S AL  +G +  W       
Sbjct: 302 GVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQ 361

Query: 260 -GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            G+G  +  D     SL S +     A G  H L +  +G VL  G +  G L
Sbjct: 362 LGQGAQNHEDHPTLASLHSVICL---AAGRYHSLAVAENGAVLAWGDNQKGQL 411



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 157/387 (40%), Gaps = 48/387 (12%)

Query: 71  MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-IT 129
           + A GG H L + +      G V++WG  SSGQLG G    +L P  V    G     + 
Sbjct: 59  IAAGGGYHSLVVKND-----GTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVL 113

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI---ACG 186
            ++AG  HS  ++  G ++T GD + GQLG G +    SPVKV       +  I   ACG
Sbjct: 114 KVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACG 173

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
            +HSL +  D     V+ +GS   GQ+G    + R      +  G     +  ++A    
Sbjct: 174 GKHSLAVASD---GTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAH 230

Query: 247 SAALSAEGHLYTWGRG----------FNSTSDVNCPQSLPSSLSFSQA-ALGWNHVLVLT 295
           S ALS +G ++ WG            ++  + V    S+   L    A A G    L LT
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290

Query: 296 GDGEVLMLG---------GSHHGMLSD--PERVSSTRPLSVALEKVSN-------LDGVK 337
            DGEV   G         G H+G + D  P R ++  PL       +N       ++   
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGS 350

Query: 338 VIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF----PPFFINVIAENRAIMTWGWGEHGQ 393
           V+   AG         + H     + S           +    +AEN A++ WG  + GQ
Sbjct: 351 VLAWGAGDRGQLGQGAQNHEDHPTLASLHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQ 410

Query: 394 LGLGNTCDQIHP---KVVNLGDEFQNR 417
           LG+G      H    K V  G  F +R
Sbjct: 411 LGIGKADKNFHALPEKTVVSGSPFISR 437


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R +I  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L +   SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 162/398 (40%), Gaps = 67/398 (16%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  S+  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTCGVNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQTSPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +                         + ++  +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T-------------------------LALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSP 340

Query: 408 VN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           V               D F+ R  + ++F G   T+ +
Sbjct: 341 VKGHWAAHSGQLSARADRFKYRVVK-QIFSGGDQTFVL 377



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L L+       +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L L    G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 66/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  + D + P+ V    G    +T I+ G  H+   V  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 KGQLGTG----HTCNVKCPSPVK 342


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R +I  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L +   SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 172/419 (41%), Gaps = 69/419 (16%)

Query: 39  WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G +  L   ++ PQ+    S  S+  +ACGG H + L        G+V++ 
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 59  GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C   L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+                         + ++  +  I  +
Sbjct: 286 -RRVLELMGSEVTQIACGRQHT-------------------------LALVPSSGLIYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           G G  GQLG G+TC+   P  V               D F+ R  + ++F G   T+ +
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L L+       +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L L    G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  + D + P+ V    G    +T I+ G  H+   V  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
            GQLG              G + +HSS +  +   F  + V QI  G   + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R +I  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L +   SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 172/419 (41%), Gaps = 69/419 (16%)

Query: 39  WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G +  L   ++ PQ+    S  S+  +ACGG H + L        G+V++ 
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 59  GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C   L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+                         + ++  +  I  +
Sbjct: 286 -RRVLELMGSEVTQIACGRQHT-------------------------LALVPSSGLIYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           G G  GQLG G+TC+   P  V               D F+ R  + ++F G   T+ +
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L L+       +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L L    G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  + D + P+ V    G    +T I+ G  H+   V  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
            GQLG              G + +HSS +  +   F  + V QI  G   + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R +I  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L +   SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 172/419 (41%), Gaps = 69/419 (16%)

Query: 39  WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G +  L   ++ PQ+    S  S+  +ACGG H + L        G+V++ 
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 59  GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C   L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+                         + ++  +  I  +
Sbjct: 286 -RRVLELMGSEVTQIACGRQHT-------------------------LALVPSSGLIYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           G G  GQLG G+TC+   P  V               D F+ R  + ++F G   T+ +
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L L+       +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L L    G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  + D + P+ V    G    +T I+ G  H+   V  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
            GQLG              G + +HSS +  +   F  + V QI  G   + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 154/377 (40%), Gaps = 53/377 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WG   DGQLG G   + +  P+  ++ S   +  + CGG H + L        G V++ G
Sbjct: 4   WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMH-----DGSVYTCG 58

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             S GQLGH +    + P+ V   D  +  IT +S G  HS  V++ G LF  G G  GQ
Sbjct: 59  SNSCGQLGHDKA--GISPEVVGALDTQK--ITMVSCGRGHSMAVNEQGQLFAWGAGDGGQ 114

Query: 158 LGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           LG G   +    P  V    +  + Q+ CG +H + L +D    Q++ +G    GQLG+ 
Sbjct: 115 LGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRD---GQLFTWGQNTSGQLGLG 171

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD-- 268
           K     +  P     L  I +  I+A GD S ALS  G ++ WG+      G N   D  
Sbjct: 172 KGEPSKL-FPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRA 230

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           V C      S      + G  H   LT DG +   G    G L      S   P      
Sbjct: 231 VPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLP-----R 285

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L G +V QIA G  H+              +++ P            +  +  +G 
Sbjct: 286 RVLELMGTEVSQIACGRHHT--------------LAFVP-----------SSGVVYAFGC 320

Query: 389 GEHGQLGLGNTCDQIHP 405
             HGQLG G   D   P
Sbjct: 321 NSHGQLGTGILGDARSP 337



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  T GQLG G+    +L P  L   +   ++ +  GG H  AL+     + G V
Sbjct: 156 QLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALS-----LSGAV 210

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+  +GQLG  +  D   P  + F    +  + +IS G  H+  ++  G LFT GDG
Sbjct: 211 FGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQK--VVYISCGDEHTAALTKDGGLFTFGDG 268

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++GQLGHG   S   P +V   +   V QIACG  H+L  +       VY FG    GQL
Sbjct: 269 SWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPS--SGVVYAFGCNSHGQL 326

Query: 214 G 214
           G
Sbjct: 327 G 327



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 29/289 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V++ G+ + GQLG    HD+  +SP+++       ++M++CG  H +A+        G++
Sbjct: 54  VYTCGSNSCGQLG----HDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQ-----GQL 104

Query: 94  FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG G  GQLG G     +  P+ V     HR  I+ +  G  H   +S  G LFT G 
Sbjct: 105 FAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHR--ISQVMCGNQHCVALSRDGQLFTWGQ 162

Query: 153 GTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            T GQLG G    S   P  + S     + QI  G  HS  L    L   V+G+G  + G
Sbjct: 163 NTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFAL---SLSGAVFGWGKNRAG 219

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR-GFNS 265
           QLG++  + R+V  P     L   ++V IS   + +AAL+ +G L+T     WG+ G  S
Sbjct: 220 QLGLNDKQDRAV--PCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGS 277

Query: 266 TSDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           T+    P+ +   +    SQ A G +H L      G V   G + HG L
Sbjct: 278 TNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQL 326



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 15/229 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WGAG  GQLG G     +  P+L+       +S + CG  H +AL+       G++
Sbjct: 103 QLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR-----DGQL 157

Query: 94  FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG+ +SGQLG G+     L+P P+    G    +  I+AG +HS  +S SG +F  G 
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPHPLKSLAG--IPLAQITAGGDHSFALSLSGAVFGWGK 215

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG  D +  + P  +    ++ V  I+CG  H+  L KD     ++ FG G  GQ
Sbjct: 216 NRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKD---GGLFTFGDGSWGQ 272

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWG 260
           LG       S  LP+  + L   E+  I+     + A + + G +Y +G
Sbjct: 273 LG--HGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFG 319



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 53/328 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG    GQLG G   + ++ P+    F G    +  +  G  HS F+   G ++TCG
Sbjct: 1   MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGR--GLKEVGCGGQHSVFLMHDGSVYTCG 58

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             + GQLGH   ++  SP  V +   + +  ++CG  HS+ + +     Q++ +G+G  G
Sbjct: 59  SNSCGQLGHD--KAGISPEVVGALDTQKITMVSCGRGHSMAVNEQ---GQLFAWGAGDGG 113

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      +V +P++   L D  I  +        ALS +G L+TWG+  N++  +  
Sbjct: 114 QLGLGTTET-TVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQ--NTSGQLGL 170

Query: 272 PQSLPSSL-----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS L             +Q   G +H   L+  G V   G +  G L   ++    
Sbjct: 171 GKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRA 230

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  +       L   KV+ I+ G EH+A +T                          ++
Sbjct: 231 VPCHIKF-----LRSQKVVYISCGDEHTAALT--------------------------KD 259

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G  GQLG G+T  ++ P+ V
Sbjct: 260 GGLFTFGDGSWGQLGHGSTNSELLPRRV 287



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++G G+ GQLG G  + EL P+ +     + VS +ACG  H LA   PSS   G V++
Sbjct: 262 LFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFV-PSS---GVVYA 317

Query: 96  WGRGSSGQLGHGEMVDALYPKPV 118
           +G  S GQLG G + DA  P PV
Sbjct: 318 FGCNSHGQLGTGILGDARSPFPV 340


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 29/297 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG  + G+LG G   D   P+L++  +  ++ ++ACG  H  A+T     + G ++
Sbjct: 331 EVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVT-----LSGDLY 385

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G+   G  GHG  V    PK +    +G    ++ IS G  H+  V+ +G LFT G
Sbjct: 386 TWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 443

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DG+FG LGHGD +S S P +V S       + ACG+ H+  +++  +GN         ++
Sbjct: 444 DGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 503

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG      R V  P     L +     ++     + AL+  GH+YT G  
Sbjct: 504 FTWGDGDKGRLGHGDKETRLV--PTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSS 561

Query: 263 F-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                 N  +D   P  +   L      + + G  HV VLT   EV   G   +G L
Sbjct: 562 VYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 618



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 152/379 (40%), Gaps = 65/379 (17%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G  +D L PKP+ F    R  + +IS G  H+  V+  G +++ G+ + G+LGHG     
Sbjct: 294 GAKMDCLVPKPLEF--AGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDV 351

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS-- 224
             P  + +  + N+  +ACG  H+  +    L   +Y +G+G     G+S      VS  
Sbjct: 352 PQPKLIDALAHMNIELVACGEYHTCAVT---LSGDLYTWGNGT-FNFGLS-GHGNEVSHW 406

Query: 225 LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS 277
           +P+   G L  I +  IS     +A +++ G L+T+G       G      ++ P+ + S
Sbjct: 407 MPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVES 466

Query: 278 --SLSFSQAALGWNH----VLVLTG--------DGEVLMLGGSHHGMLSDPERVSSTRPL 323
              L   +AA G  H    V V+ G         G++   G    G L   ++ +   P 
Sbjct: 467 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPT 526

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP------------ 371
            VA     +L      Q+A G   +  +T   H   +    Y     P            
Sbjct: 527 CVA-----SLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEG 581

Query: 372 --------------FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                         + + V+     + TWG G +G+LG G+T D+  P +V    + Q R
Sbjct: 582 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVR 641

Query: 418 DTQLEVFCGSGFTYAISRH 436
                V CG  FT AI  H
Sbjct: 642 ----SVVCGINFTAAICIH 656



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      +   +ACG    +ALT+      G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTT-----SGHVY 556

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P  V   +G  H+  +  IS G  H   ++    ++T G 
Sbjct: 557 TMGSSVYGQLGNPQ-ADGMVPARV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  G+LGHGD    +SP  V +  +K V  + CG+  +  +
Sbjct: 613 GANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAI 653


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R +I  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L +   SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 172/419 (41%), Gaps = 69/419 (16%)

Query: 39  WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G +  L   ++ PQ+    S  S+  +ACGG H + L        G+V++ 
Sbjct: 4   WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 59  GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C   L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+                         + ++  +  I  +
Sbjct: 286 -RRVLELMGSEVTQIACGRQHT-------------------------LALVPSSGLIYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           G G  GQLG G+TC+   P  V               D F+ R  + ++F G   T+ +
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L L+       +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L L    G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  + D + P+ V    G    +T I+ G  H+   V  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
            GQLG              G + +HSS +  +   F  + V QI  G   + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 189/434 (43%), Gaps = 85/434 (19%)

Query: 36  VWSWGA---------GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           V+ WG          GT  Q+     +D L+P+ L  + +  V  +ACG  H+  +T   
Sbjct: 90  VYVWGEIWTDLVLPDGTSSQIPVK--NDVLTPKPLETNVVLDVQQIACGVRHIALVTR-- 145

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI---SAGWNHSGFVSD 143
               G+VF+WG    G+LGHG   D   P  V F       ++H+   + G  H+  ++ 
Sbjct: 146 ---QGEVFTWGEECGGRLGHGIDRDFSRPHLVEFL-----AVSHVDFVACGEYHTCAITS 197

Query: 144 SGCLFTCGDGTF--GQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           S  L+T GDG F  G LGHG   SH  P +V  S     V  +ACG  HS +   +    
Sbjct: 198 SNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSN---G 254

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANGDRSAALSAEG-- 254
           ++Y FG G  G LG   DR  SV  P   Q+  GL  I++  G+         +S  G  
Sbjct: 255 KLYTFGDGTYGVLG-HGDR-ESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSN 312

Query: 255 ----HLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLM 302
                L+TWG G          ++  LP+ +S      F Q A G N  + LT  G V  
Sbjct: 313 MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFT 372

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
           +GG+ +G L +P   SS   +   ++    L G  V +I+ GA H+ V+T +        
Sbjct: 373 MGGTAYGQLGNP---SSDGVIPCLVQ--DRLVGEFVEEISCGAYHTVVLTSR-------- 419

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
                               + +WG G +G+LG G+  D+  P ++   +  ++R  +  
Sbjct: 420 ------------------NEVFSWGRGSNGRLGHGDVEDRKAPTLI---EALKDRHVK-S 457

Query: 423 VFCGSGFTYAISRH 436
           + CGS FT +I  H
Sbjct: 458 ISCGSNFTASICIH 471



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 27/295 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG    G+LG G   D   P L+   ++S V  +ACG  H  A+TS        ++
Sbjct: 148 EVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITS-----SNDLY 202

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  +SG LGHG  +    PK V    +G    +  ++ G  HS   + +G L+T G
Sbjct: 203 TWGDGIFNSGILGHGTDISHWIPKRVVGSLEG--LQVLSVACGTWHSALATSNGKLYTFG 260

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGT+G LGHGD  S   P +V         ++ACG+ H+  +++       +    +++ 
Sbjct: 261 DGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFT 320

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----W 259
           +G G + +LG       +  LP     L D     ++   + + AL+  GH++T     +
Sbjct: 321 WGDGDKYRLGHGNK--ETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAY 378

Query: 260 GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G+  N +SD   P  +   L      + + G  H +VLT   EV   G   +G L
Sbjct: 379 GQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRL 433



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  ++     +   LACG    +ALT+      G VF
Sbjct: 317 KLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT-----SGHVF 371

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG+    D + P  V       + +  IS G  H+  ++    +F+ G G+
Sbjct: 372 TMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEF-VEEISCGAYHTVVLTSRNEVFSWGRGS 429

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
            G+LGHGD     +P  + +  +++V  I+CG   +  +   C+   V G      +G R
Sbjct: 430 NGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASI---CIHKWVSGADQSVCTGCR 486

Query: 211 GQLGVSKDR 219
              G ++ R
Sbjct: 487 QAFGFTRKR 495


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 170/406 (41%), Gaps = 70/406 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D   P+ L  + +  V  +ACGG H   +T       G+VF+WG  S G+LGHG   D  
Sbjct: 296 DAPLPKALESAIVLDVQYVACGGKHAALVTKQ-----GEVFTWGEESGGRLGHGVDCDVS 350

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +P+ V        T   ++ G  H   V+ SG L+T GDGT   G LGHG+  SH  P +
Sbjct: 351 HPQLVEALASS--TTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKR 408

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  + +  V  IACG  H+ V+       Q++ FG G  G LG   DR +S   P+   
Sbjct: 409 VNGPLEEVRVASIACGPWHTAVVT---TAGQLFTFGDGTFGVLG-HNDR-QSAYSPREVE 463

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGR------GFNSTSDVNCP 272
            L  +  V  +     +AA+             + G L+TWG       G         P
Sbjct: 464 SLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP 523

Query: 273 QSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             + + +  +F + A G +  + LT  GEV  +G S  G L DP+      P  V     
Sbjct: 524 TCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQ-ADGKLPGMVE---- 578

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L    V  IA GA H A VT K                            + TWG G 
Sbjct: 579 GRLVDAYVEDIACGAHHVACVTLKSE--------------------------VYTWGKGA 612

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V    E Q +     + CG+ FT A+  H
Sbjct: 613 NGRLGHGDQEDRNTPTLVEALKEKQVKS----IACGATFTAAVCLH 654



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 152/338 (44%), Gaps = 36/338 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   PQL+   + S+  ++ACG  H  A+T     + G ++
Sbjct: 329 EVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT-----LSGDLY 383

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
           +WG G  S G LGHG  +    PK V   +G      +  I+ G  H+  V+ +G LFT 
Sbjct: 384 TWGDGTHSLGLLGHGNDISHWIPKRV---NGPLEEVRVASIACGPWHTAVVTTAGQLFTF 440

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDGTFG LGH D +S  SP +V S       + ACG+ H+  +++  +G+         +
Sbjct: 441 GDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGK 500

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           ++ +G G +G+LG      R V  P     L D     ++     + AL+ +G ++T G 
Sbjct: 501 LFTWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGS 558

Query: 262 G-FNSTSDVNCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
             F    D      LP  +            A G +HV  +T   EV   G   +G L  
Sbjct: 559 SMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGH 618

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            ++     P       V  L   +V  IA GA  +A V
Sbjct: 619 GDQEDRNTPT-----LVEALKEKQVKSIACGATFTAAV 651


>gi|336088622|ref|NP_001229506.1| secretion regulating guanine nucleotide exchange factor [Apis
           mellifera]
          Length = 381

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 179/390 (45%), Gaps = 66/390 (16%)

Query: 38  SWGAGTDGQLGTG-RLHDELSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVIGGK 92
           SWGA + GQLG G R  + + P  ++LS  S     +  +  G  H L L        G 
Sbjct: 7   SWGANSHGQLGQGFRSEECVLPCEVDLSKCSLEPQKIKKIIGGAGHTLILDDY-----GC 61

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+S G  + GQ+G     D L  + +     ++  I  I+ GW+ S  ++  G LF  G 
Sbjct: 62  VYSCGWNNKGQVGFSTKEDILLFQKLKGKLKNK-VIVDIACGWDCSAALTIEGTLFVWGS 120

Query: 153 GTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            +FGQLG    D +    P +V   +++ + +I+ G+RH++++ +D    +V+  G+  +
Sbjct: 121 NSFGQLGKHPNDLQWTHEPFEV--VIDRKIKRISIGLRHTVLITED---YKVFVAGTDNK 175

Query: 211 GQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
           GQLG++  +    + +V +    + L +IE   IS     + A++ +G+ Y +G      
Sbjct: 176 GQLGLNSTKNDKSLNAVYIFTEVLTLSNIE--HISCGQHHTIAVAKDGNFYAFGDNKYGQ 233

Query: 267 SDVNC---PQSL-PSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
             +N    P++L P  LS  Q  L      GW+HV+VL  +  +   G + +G L   + 
Sbjct: 234 LGINTDIFPKTLIPIKLSDFQFKLPFNLYSGWSHVIVLKNN-YIFGWGRNTYGQLGIAQL 292

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
             S+   ++ LE +      K+ Q++ G+EH+  +T                        
Sbjct: 293 EKSSTWKAIQLENIP-----KIYQVSVGSEHNVALT------------------------ 323

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
             EN  I+ WGW EHG  G G+T D   P+
Sbjct: 324 --ENGKILCWGWNEHGNCGNGHTKDVKFPE 351



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 7/103 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG  T GQLG  +L    + + + L ++  +  ++ G  H +ALT       GK+  
Sbjct: 276 IFGWGRNTYGQLGIAQLEKSSTWKAIQLENIPKIYQVSVGSEHNVALTE-----NGKILC 330

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
           WG    G  G+G   D  +P+ +     + Y    + +G  HS
Sbjct: 331 WGWNEHGNCGNGHTKDVKFPEQLLL--SYNYVGILVGSGAAHS 371


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 167/375 (44%), Gaps = 49/375 (13%)

Query: 4   PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
           P + +T +GK   I       E         +V+S G  ++GQ G G + DE  P+++  
Sbjct: 35  PTLSQTSRGKD--IVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGEI-DETVPEMV-- 89

Query: 64  SSLSSVSML---------------ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
            SL+ V++                  G  H++ +T       G++ + GR +SGQLGHGE
Sbjct: 90  PSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEE-----GELQTCGRNNSGQLGHGE 144

Query: 109 MVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167
           +      P+PV  F G+R  +T ++  ++H+  V+D    +T G   +GQLGHGD+ S S
Sbjct: 145 VGKGYSLPRPVAGFAGYR--VTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRS 202

Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227
           +P  ++ F    V  +ACG+ H++V +       +Y FG    GQLG+     R   +  
Sbjct: 203 APAALACFQGLGVLSVACGVYHTVVSVAS---GGLYSFGKNDHGQLGLEGGESRFTPVQH 259

Query: 228 VTIGLHDIEIVGISANG-DRSAALSAEGHLYTWGRGFNSTSDVNCPQS------LP--SS 278
                    +V   A G   + ALS  G +  +GR       +   +S      +P  + 
Sbjct: 260 RAC----TSVVEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAG 315

Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
           L   Q A G  H + L  +G V   G ++HG L    R  + RP       V  L    V
Sbjct: 316 LRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCF-----VEGLSQSFV 370

Query: 339 IQIAAGAEHSAVVTG 353
            Q+AAG  H+  +TG
Sbjct: 371 CQVAAGFYHTLCLTG 385



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 164/397 (41%), Gaps = 61/397 (15%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           Q  +++ +G    G+LG G   +  +P L   S    +  +  G      LT+      G
Sbjct: 9   QERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNT-----G 63

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPV-----------TFFDGHRYTITHISAGWNHSGF 140
           +V+S G  S GQ G GE +D   P+ V           +F    R ++ H   G  H   
Sbjct: 64  EVYSCGYNSEGQCGIGE-IDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVV 122

Query: 141 VSDSGCLFTCGDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
           V++ G L TCG    GQLGHG+  + +S P  V+ F    V ++AC   H++V+  D   
Sbjct: 123 VTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDD--- 179

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
           ++ + FG    GQLG      RS   P        + ++ ++     +    A G LY++
Sbjct: 180 DRTWTFGGNGYGQLGHGDHSSRSA--PAALACFQGLGVLSVACGVYHTVVSVASGGLYSF 237

Query: 260 GR------GFNSTSDVNCP-QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
           G+      G         P Q    +    Q A G+ H + L+  GEV+  G + +G L 
Sbjct: 238 GKNDHGQLGLEGGESRFTPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRNDYGQLG 297

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
              R S+ +       +V +L G+++IQ+A G+ H+                        
Sbjct: 298 LGHRESTWQG-----GQVPDLAGLRIIQVACGSYHT------------------------ 328

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            I++  E R +  +G   HGQLG G   D   P  V 
Sbjct: 329 -ISLDDEGR-VYPFGRNNHGQLGTGTREDACRPCFVE 363


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 166/413 (40%), Gaps = 72/413 (17%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      +  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V +IA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 440
            G +GQLG G+T ++  P                  F   G  YA +  CLP 
Sbjct: 321 LGGNGQLGTGSTSNRKSP------------------FTVKGNWYAYNGQCLPD 355



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  I  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--IRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V +IACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       +  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H S FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 166/413 (40%), Gaps = 72/413 (17%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      +  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V +IA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 440
            G +GQLG G+T ++  P                  F   G  YA +  CLP 
Sbjct: 321 LGGNGQLGTGSTSNRKSP------------------FTVKGNWYAYNGQCLPD 355



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  I  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--IRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V +IACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       +  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H S FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
           terrae PB90-1]
 gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
           PB90-1]
          Length = 1848

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 148/323 (45%), Gaps = 45/323 (13%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELS--PQLLNLSSL---SSVSMLACGGAHVLALTSPSS 87
            V++WG   +GQLG G   L  ++S  P  ++++ +    ++  +A G  H LAL S   
Sbjct: 192 TVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALASD-- 249

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT---FFDGHRYTITHISAGWNHSGFVSDS 144
              G V++WG  S GQLG G   D+  P  V       G   T+  I+AG NHS  V+  
Sbjct: 250 ---GIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGK--TVVAIAAGRNHSLAVASD 304

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKV--SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           G ++  GD  + QLG G     S PV V  +    K+V  +A G RHSL    D     V
Sbjct: 305 GTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDRHSLAQASD---GTV 361

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTI----GLHDIEIVGISANGDRSAALSAEGHLYT 258
           Y +G    GQ+G   D I  +    V++     L    IV ++A G  + AL+++G + T
Sbjct: 362 YAWGDNTNGQMG---DTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVCT 418

Query: 259 WGRGFN-------------STSD--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           WG  +N             ST    VN   +LP     +  A G +H L L  DG +   
Sbjct: 419 WGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGA-GVSHSLALASDGALCTW 477

Query: 304 GGSHHGMLSDPERVSSTRPLSVA 326
           G +  G L D    + T P++V+
Sbjct: 478 GFNSQGQLGDNSTTNRTVPVTVS 500



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 177/439 (40%), Gaps = 76/439 (17%)

Query: 37  WSWGAGTDGQLGTGRL----HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVI 89
           ++WG  + GQLG G      +  + P   + S +    ++  LA    H LAL S     
Sbjct: 135 YAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLALASD---- 190

Query: 90  GGKVFSWGRGSSGQLGHGE--MVDALYPKPVTF-----FDGHRYTITHISAGWNHSGFVS 142
            G V++WG  ++GQLG+G   +   +   PV         G   TI  I+ G+ HS  ++
Sbjct: 191 -GTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGK--TIIAIATGYEHSLALA 247

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS---FVNKNVHQIACGMRHSLVLLKDCLG 199
             G ++  GD + GQLG G       P+ V        K V  IA G  HSL +  D   
Sbjct: 248 SDGIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVASD--- 304

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYT 258
             VY +G     QLG       SV +P     L    +  + A GDR S A +++G +Y 
Sbjct: 305 GTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADV-AGGDRHSLAQASDGTVYA 363

Query: 259 WGRGFNSTSDVNCPQSLPSSLSFS-----------QAALGWNHVLVLTGDGEVLMLGGSH 307
           WG   N           P+ +S +             A G  H L L  DG V   G ++
Sbjct: 364 WGDNTNGQMGDTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVCTWGYNY 423

Query: 308 HGMLSDPERVS---STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
           +G L +    +   ST P  +A+     L G  ++ + AG  HS                
Sbjct: 424 NGQLGNNSSGAGEKSTVP--IAVNSYGALPGKTIVAVGAGVSHSL--------------- 466

Query: 365 YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD-EFQNRDTQLEV 423
                       +A + A+ TWG+   GQLG  +T ++  P  V+ G   FQ     L  
Sbjct: 467 -----------ALASDGALCTWGFNSQGQLGDNSTTNRTVPVTVSAGGLMFQ----ALGT 511

Query: 424 FCGSGFTYAISRHCLPSQT 442
            C + ++ A++    P+ T
Sbjct: 512 TCDAVYSLALATVPPPTIT 530


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 24/272 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
           +V+S G    GQLG G    ++SP LL + SL  V +L+  C   H + ++S      G 
Sbjct: 156 QVYSCGCNNHGQLGLGS--TKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSD-----GS 208

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            FS+G    GQLG G   + L P  V     H   +   + G  H+ F+++ G +F+CG 
Sbjct: 209 AFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLA--ACGQYHTIFLTEEGMVFSCGK 266

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   S + P  +++   +    IACG  H+ V+L+D    +++ FG   +GQ
Sbjct: 267 NLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLED---GKLFTFGYNHQGQ 323

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
           LG+      SVS P     L ++++V IS     +  LS  G L+++G       G   +
Sbjct: 324 LGLG--HTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDS 381

Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
           +D   P  +PS    + S+ A G++H++ ++G
Sbjct: 382 TDRLVPVLVPSMTKKNLSEIACGFHHLVAISG 413



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 174/433 (40%), Gaps = 72/433 (16%)

Query: 24  IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
           + EE   +    V++ G    G+LG     +++   L+       +  +A G      LT
Sbjct: 30  VNEETHGEGDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLT 89

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-----YPKPVTFFDG--HRYTITHISA--G 134
                  GKV+  G  S+GQL       +      Y   +   +G      +  +S   G
Sbjct: 90  EE-----GKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNG 144

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
             H   V+ +G +++CG    GQLG G  +   S + V S  +  V   +C   HS+V+ 
Sbjct: 145 AEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVS 204

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAE 253
            D      + FG    GQLG+     R   L    + L    +V ++A G   +  L+ E
Sbjct: 205 SD---GSAFSFGLNDCGQLGIG---TRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEE 258

Query: 254 GHLYTWGRGFN------STSDVNCP------QSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
           G +++ G+  N      S S  N P      Q  P+S+     A G++H  V+  DG++ 
Sbjct: 259 GMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASM----IACGYSHTCVVLEDGKLF 314

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G +H G L      S + P+     +V  L  VKV++I+ G                 
Sbjct: 315 TFGYNHQGQLGLGHTDSVSSPM-----QVETLRNVKVVKISCGTH--------------- 354

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                      F  V++E+  + ++G   HGQLGLG++ D++ P +V        +    
Sbjct: 355 -----------FTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLV----PSMTKKNLS 399

Query: 422 EVFCGSGFTYAIS 434
           E+ CG     AIS
Sbjct: 400 EIACGFHHLVAIS 412


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V +IA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTST-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V +IACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       +  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H S FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 49/327 (14%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +F WG   +G+LG G + +   L PK   F  G    +  +S G  H+ FV   G ++TC
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPF--GATKAMREVSCGRQHTVFVLAEGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   +GQLG    + H  P  +++   +++ Q++CG  H+LV+       QV+ +G    
Sbjct: 59  GSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDK---YQVFSWGYDDC 113

Query: 211 GQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           GQLG + +   + S  P++   L  ++IV ++  G  S ALS +G +++WG       G 
Sbjct: 114 GQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI 173

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            ST +   PQ L S   + F Q   G +H  VL+  G V   G +  G L   +      
Sbjct: 174 GSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKY 233

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P       V +L  +KV  I+ G EH+AV+T                           + 
Sbjct: 234 P-----THVKSLRSLKVTHISCGEEHTAVLT--------------------------LDG 262

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            ++T+G G +GQLG  +   +  P+ V
Sbjct: 263 GVLTFGAGSYGQLGHNSNNHEALPRKV 289



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 22/248 (8%)

Query: 35  KVWSWGAGTDGQLG---TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQLG       ++   P+++   S   +  +ACGG H LAL++      G
Sbjct: 104 QVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSN-----DG 158

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           ++FSWG  S GQLG G   +   P+ +T   G  +    I AG +HS  +S SG +F  G
Sbjct: 159 RIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPF--CQIVAGGSHSFVLSKSGAVFGFG 216

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             TFGQLG GD      P  V S  +  V  I+CG  H+ VL  D     V  FG+G  G
Sbjct: 217 RNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLD---GGVLTFGAGSYG 273

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN------ 264
           QLG + +     +LP+    L  +E+  ++     + A + + G +Y++G G N      
Sbjct: 274 QLGHNSNNHE--ALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSK 331

Query: 265 STSDVNCP 272
            T++ N P
Sbjct: 332 GTTNCNTP 339



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 143/326 (43%), Gaps = 32/326 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WGA  +G+LG G + ++  L+P+     +  ++  ++CG  H + + +      G V
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAE-----GTV 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++ G    GQLG     D  + +P         +I  +S G  H+  V+D   +F+ G  
Sbjct: 56  YTCGSNDYGQLGQ----DKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYD 111

Query: 154 TFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
             GQLGH       +   P  V    +  + Q+ACG +HSL L  D    +++ +G+   
Sbjct: 112 DCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSND---GRIFSWGNNSH 168

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           GQLG+     ++   PQ    L  I    I A G  S  LS  G ++ +GR      G  
Sbjct: 169 GQLGIGS--TKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLG 226

Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T D   P  + S  SL  +  + G  H  VLT DG VL  G   +G L          P
Sbjct: 227 DTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALP 286

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
                 KV  L G++V Q+A G  H+
Sbjct: 287 -----RKVFELMGLEVTQLACGRMHT 307



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 39/264 (14%)

Query: 18  NNAKPKIEEEEEEQQVV----------------KVWSWGAGTDGQLGTGRLHDELSPQLL 61
           N+ +P++ +E    Q+V                +++SWG  + GQLG G   ++  PQ  
Sbjct: 126 NSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQ-- 183

Query: 62  NLSSLSSVSM--LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
            L+SL+ +    +  GG+H   L+       G VF +GR + GQLG G+  D  YP  V 
Sbjct: 184 ELTSLTGIPFCQIVAGGSHSFVLSK-----SGAVFGFGRNTFGQLGLGDTGDRKYPTHVK 238

Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
                +  +THIS G  H+  ++  G + T G G++GQLGH      + P KV   +   
Sbjct: 239 SLRSLK--VTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLE 296

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTI-GLHD 234
           V Q+ACG  H++  ++     ++Y FG G  GQLG     + +   +V  P V   G + 
Sbjct: 297 VTQLACGRMHTMAYVES--SGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNS 354

Query: 235 IE-----IVGISANGDRSAALSAE 253
           +E     +  I+A GD++ AL+++
Sbjct: 355 LEEQCYVVQAITAGGDQAFALASK 378



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 129/300 (43%), Gaps = 22/300 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G+   GQLG  + H    P ++      S+  ++CG  H L +         +VFS
Sbjct: 55  VYTCGSNDYGQLGQDKGHKR--PTVITALDTQSIQQVSCGDYHNLVVNDKY-----QVFS 107

Query: 96  WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG    GQLGH  E       +P    +     I  ++ G  HS  +S+ G +F+ G+ +
Sbjct: 108 WGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNS 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G  ++   P +++S       QI  G  HS VL K      V+GFG    GQLG
Sbjct: 168 HGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSK---SGAVFGFGRNTFGQLG 224

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           +     R    P     L  +++  IS   + +A L+ +G + T+G       G NS + 
Sbjct: 225 LGDTGDRKY--PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNH 282

Query: 269 VNCPQSLPS--SLSFSQAALGWNHVLV-LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
              P+ +     L  +Q A G  H +  +   G +   G   +G L      +   P++V
Sbjct: 283 EALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITV 342


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V +IA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V +IACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       +  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H S FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V +IA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V +IACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       +  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H S FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 172/406 (42%), Gaps = 70/406 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D   P+ L  + +  V  +ACGG H   +T       G+VF+WG  S G+LGHG   D  
Sbjct: 296 DAPLPKALESAIVLDVQYVACGGKHAALVTKQ-----GEVFTWGEESGGRLGHGVDCDVS 350

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +P+ V        T   ++ G  H   V+ SG L+T GDGT   G LGHG+  SH  P +
Sbjct: 351 HPQLVEALASS--TTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKR 408

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           V+  + +  V  IACG  H+ V+       Q++ FG G  G LG   DR +S   P+   
Sbjct: 409 VNGPLEEVRVASIACGPWHTAVV---TTAGQLFTFGDGTFGVLG-HNDR-QSAYSPREVE 463

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGR------GFNSTSDVNCP 272
            L  +  V  +     +AA+             + G L+TWG       G         P
Sbjct: 464 SLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVP 523

Query: 273 QSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             + + +  +F + A G +  + LT  GEV  +G S  G L DP+   +   L   +E  
Sbjct: 524 TCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQ---ADGKLPGMVE-- 578

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L    V  IA GA H A VT K                            + TWG G 
Sbjct: 579 GRLVDAYVEDIACGAHHVACVTLKSE--------------------------VYTWGKGA 612

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V    E Q +     + CG+ FT A+  H
Sbjct: 613 NGRLGHGDQEDRNTPTLVEALKEKQVKS----IACGATFTAAVCLH 654



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 149/336 (44%), Gaps = 32/336 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   PQL+   + S+  ++ACG  H  A+T     + G ++
Sbjct: 329 EVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT-----LSGDLY 383

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +WG G  S G LGHG  +    PK V         +  I+ G  H+  V+ +G LFT GD
Sbjct: 384 TWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACGPWHTAVVTTAGQLFTFGD 442

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG---------NQVY 203
           GTFG LGH D +S  SP +V S       + ACG+ H+  +++  +G          +++
Sbjct: 443 GTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLF 502

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
            +G G +G+LG      R V  P     L D     ++     + AL+ +G ++T G   
Sbjct: 503 TWGDGDKGRLGHGDKEQRLV--PTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSM 560

Query: 263 FNSTSDVNCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           F    D      LP  +            A G +HV  +T   EV   G   +G L   +
Sbjct: 561 FGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGHGD 620

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +     P       V  L   +V  IA GA  +A V
Sbjct: 621 QEDRNTPT-----LVEALKEKQVKSIACGATFTAAV 651


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 166/413 (40%), Gaps = 72/413 (17%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      +  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V +IA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 440
            G +GQLG G+T ++  P                  F   G  YA +  CLP 
Sbjct: 321 LGGNGQLGTGSTSNRKSP------------------FTVKGNWYAYNGQCLPD 355



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  I  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--IRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V +IACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       +  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H S FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|344280856|ref|XP_003412198.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
           nucleotide exchange factor-like [Loxodonta africana]
          Length = 454

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 177/440 (40%), Gaps = 75/440 (17%)

Query: 26  EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTS 84
           E   E     +++WGA + GQLG G   D L PQ LN       V  +  GG H   +T 
Sbjct: 9   ESAPESARAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCEPGCVRRITGGGGHSTVVTD 68

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G +F  G    GQLG G   D LY  P T   G    I  ++ GW+ +  +++S
Sbjct: 69  E-----GGLFVCGLNKDGQLGLGHTEDVLYFTPCTSLLG--CPIQQVACGWDFTIILTES 121

Query: 145 GCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           G + +CG   FGQLG  HG  R      +V   + + V  +A G+RH+L      +  Q 
Sbjct: 122 GQVLSCGSNLFGQLGVPHGPQRCVVP--QVIELLREEVVCVAAGLRHALAATASGIVFQ- 178

Query: 203 YGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
           +G G   SG+R   G +     +   P    GL   ++  + A  D SA+L+  G LY W
Sbjct: 179 WGTGLASSGRRLCPGQTLPLFLTAKEPSRVTGLETSKVRCVLAGSDHSASLTDAGELYVW 238

Query: 260 GRG-------------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
           G                    +V+C Q+   +  +S    GW H++  T  G+V   G +
Sbjct: 239 GSNKHGQLSAQAAFLPVPQKIEVHCFQNEKVTAVWS----GWTHLVAQTETGKVFTWGRA 294

Query: 307 HHGMLS---------DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTGKF 355
            +G L            E+  S+ P       V S+L  +    +++ G+EH+  V G  
Sbjct: 295 DYGQLGRKLEAHEGWKQEKQESSLPCLKPRNSVPSSLHCLTGATEVSCGSEHNLAVMGG- 353

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                  + Y                   +WGW EHG  G G   +   P  V    +  
Sbjct: 354 -------VCY-------------------SWGWNEHGMCGDGTEANVWAPVPV----QAL 383

Query: 416 NRDTQLEVFCGSGFTYAISR 435
                L V CG+G + A+ +
Sbjct: 384 RSSVGLHVGCGAGHSLALCQ 403


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 159/381 (41%), Gaps = 54/381 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  ++ G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V Q+A G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
            G +GQLG G+T ++  P  V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTV 341



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  +ACG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  +ACG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +         I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLS--DIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---LSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 86/182 (47%), Gaps = 10/182 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V Q+ACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 GV 215
           G 
Sbjct: 328 GT 329


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 174/434 (40%), Gaps = 96/434 (22%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG G  G+LG G L  +  P + +     S+  +ACGGAH L LT       G V++ G 
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTES-----GCVYAAGL 92

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQL  G  VD  Y             I HI+AG+ HS  ++  G L+  G  + GQL
Sbjct: 93  NDFGQL--GVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQL 150

Query: 159 GHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           G G   ++  S P KV      ++  +A G  HS+         +   +G+G  G+LG  
Sbjct: 151 GLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQ---GEALSWGAGGSGRLGHG 207

Query: 217 KD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            +       R  S   P++   L  I++  ++A    SA +   G ++ +G       GF
Sbjct: 208 HESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGF 267

Query: 264 NSTSDVNCPQSLPSSLSFS-QAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--------P 314
               +   P S+ S L +S Q A G  H  V++  GE+   G + +G L          P
Sbjct: 268 REAKNATAP-SMISELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFP 326

Query: 315 ERVS---STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           ER+    S  P+S               Q++ G +H+A ++                   
Sbjct: 327 ERIEGPFSKNPVS---------------QVSCGWKHTAAIS------------------- 352

Query: 372 FFINVIAENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                      + TWGWG              GQLG G+  D I PK+V    EF+    
Sbjct: 353 --------EGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMV----EFEESVR 400

Query: 420 QLEVFCGSGFTYAI 433
            L+V CG   T AI
Sbjct: 401 ALQVSCGFNHTGAI 414



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 142/328 (43%), Gaps = 56/328 (17%)

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+G FG+LG G   S   P   S+F + ++  IACG  H+L L +      VY  G    
Sbjct: 39  GNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTES---GCVYAAGLNDF 95

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
           GQLGVS D+  + +   + +     +I+ I+A    SAA++A+G LY WG+  N      
Sbjct: 96  GQLGVSVDK--NYTTEPLEVSALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLG 153

Query: 265 --STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVL--------MLGGSHHGMLS 312
             + + V+ P  +   + +S    ALG  H +  T  GE L         LG  H   L 
Sbjct: 154 KKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLL 213

Query: 313 DPERVSST-RPLSVALEKVSNLDGVKVIQIAAGAEHSAVV-------------TGKFHWV 358
              R SS  RP       +  L+G+KV  +AAG  HSA +               KF + 
Sbjct: 214 GFFRTSSEYRP-----RLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFR 268

Query: 359 RL------FIISYTPFFPP-----FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
                    +IS  P+        +   VI+ +  + TWG  E+G LG+G   + IH   
Sbjct: 269 EAKNATAPSMISELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGFM-ETIHFPE 327

Query: 408 VNLGDEFQNRDTQLEVFCGSGFTYAISR 435
              G   +N  +Q  V CG   T AIS 
Sbjct: 328 RIEGPFSKNPVSQ--VSCGWKHTAAISE 353



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 25/239 (10%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG  ++GQLG G +  + +S P  +   +  S+ M+A G  H +A T       G+
Sbjct: 138 ELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQ-----GE 192

Query: 93  VFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
             SWG G SG+LGHG     L          P+ +   +G +  + +++AG  HS  + +
Sbjct: 193 ALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIK--VKNVAAGLLHSACIDE 250

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +G +F  G+    + G  + ++ ++P  +S        Q+ACG  H+ V+       +++
Sbjct: 251 NGSVFIFGERAMDKFGFREAKNATAPSMISELPYSK--QVACGGYHTCVISSS---GELF 305

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            +GS + G LG+    + ++  P+   G      V   + G +  A  +EG+++TWG G
Sbjct: 306 TWGSNENGCLGMG--FMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISEGNVFTWGWG 362



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 23/147 (15%)

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
           +S L     +ACGG H   ++S      G++F+WG   +G LG G M    +P+ +   +
Sbjct: 279 ISELPYSKQVACGGYHTCVISSS-----GELFTWGSNENGCLGMGFMETIHFPERI---E 330

Query: 123 G--HRYTITHISAGWNHSGFVSDSGCLFTCG----DGTF--------GQLGHGDYRSHSS 168
           G   +  ++ +S GW H+  +S+ G +FT G     GTF        GQLG G    H  
Sbjct: 331 GPFSKNPVSQVSCGWKHTAAISE-GNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIK 389

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLK 195
           P  V    +    Q++CG  H+  +L+
Sbjct: 390 PKMVEFEESVRALQVSCGFNHTGAILE 416


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 175/431 (40%), Gaps = 84/431 (19%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNL--------SSLSSVSMLACGGAHVLALTSPSSVIG 90
           WG G  G+LG G L    SP                   + LACGGAH L LT       
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTES----- 91

Query: 91  GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G+VF+ G    GQLG G  V  +L P  V+ FD     +  +SAG +HS  V+  G LF 
Sbjct: 92  GRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD---EKVVEVSAGNHHSCAVTADGKLFA 148

Query: 150 CGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G  + GQLG G       S+P KV    +  V  +A G  HS+   ++    +V  +G+
Sbjct: 149 WGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEE---GEVLSWGA 205

Query: 208 GKRGQLGVS-KDRIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              G+LG   K  I   S+      P++   L  ++I  I+A    SA +  +G L+ +G
Sbjct: 206 AGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 265

Query: 261 ----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDP 314
               +GF  + D   P  +       + A G  H  V+T  G++   G + +G   L   
Sbjct: 266 QKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGT 325

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
           + V S   L  +L K        V +++ G +H+AV++G                     
Sbjct: 326 DMVRSPEVLKSSLFK------FPVSKVSCGWKHTAVISGG-------------------- 359

Query: 375 NVIAENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
                   I TWGWG              GQLG GN  D   P +V    EF      + 
Sbjct: 360 -------DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV----EFGKNARAVH 408

Query: 423 VFCGSGFTYAI 433
           V CG   T AI
Sbjct: 409 VSCGFNHTGAI 419


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V +IA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                     PQ L S L   F Q A G  H  VLT  G +   G +  G L   +    
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P       + +L   K++ I  G +H+A +T                          +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
              + T+G G +GQLG  +T  +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQLL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V +IACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG    GQLG    +D   P LL       +  + CG  H  ALT       G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
           +G G  GQLGH      + P+ V  F+     +T I+ G  H S FV  SG +++ G G 
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 155 FGQLGHGDYRSHSSPVKVS 173
            GQLG G   +  SP  V 
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 171/407 (42%), Gaps = 63/407 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG  + GQLG G   D ++P  + ++ L+ V  +A G  H LAL        G V++
Sbjct: 121 VWAWGGNSSGQLGDGTTTDRVTP--MQVAGLTDVVAVAAGDFHSLALRGD-----GTVWA 173

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G     L P+PV   +G    +  ++AG++ +  V D G +   G  + 
Sbjct: 174 WGTNFHGQLGRGHTEPGLTPEPVPGLEG----VVALAAGFDFTLAVMDDGTVRAWGANSS 229

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G +    +PV+V+      +  +  G  H++ L KD     V+ +G+   GQLG 
Sbjct: 230 GQLGDGTFTQRLAPVEVAHI--SGISAVTAGTYHAVALGKD---GGVWTWGANSSGQLGD 284

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWGR------GFNSTSD 268
                R+V  P    GL  ++ V   A+ D S+ AL   G +  WG       G + T D
Sbjct: 285 GAWSDRAV--PARVPGLERVKAV---ASMDASSLALLEAGSVLAWGANGSGQLGDSGTDD 339

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRPLSVA 326
              P  +P   S +    G  H L L GDG +   GG   G L     ER     PL   
Sbjct: 340 RATPGEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPL--- 396

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHW-------------------VRLFIIS 364
                 L    V  +AAG+ HS    G    + W                   VR+  +S
Sbjct: 397 ------LRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLS 450

Query: 365 YTPFFPPFFINVIAENRAIMTWGWGEH--GQLGLGNTCDQIHPKVVN 409
                     + +A       W WG +  GQLG G+T D+  P  V+
Sbjct: 451 GIRGVAASGHHSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPVAVS 497



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 159/381 (41%), Gaps = 63/381 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG G  GQLG G     + P    L  L+ V+ +A G  H LA     ++  G V+S
Sbjct: 371 LWAWGGGLAGQLGHGGSERHVVPA--PLLRLADVASMAAGSFHSLA-----ALGDGTVWS 423

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR + GQLG G   +      V    G    I  ++A  +HS  V   G ++  G    
Sbjct: 424 WGRNTYGQLGDGTTAERHAAVRVEGLSG----IRGVAASGHHSLAVGADGTVWAWGRNAA 479

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
           GQLG G  R  + PV VS     +V  +A G  H++ L  D     V+ +G    GQL  
Sbjct: 480 GQLGDGSTRDRARPVAVSGLT--SVVAVATGGSHTMALRGD---GTVWAWGYNALGQLGD 534

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC-- 271
           G + DR+  V + ++        +V ++A    S AL  +G ++TWG GF          
Sbjct: 535 GTTVDRLTPVRVARLD------SVVAVAAGTYFSMALRGDGTVWTWGEGFEGQVGDGGGV 588

Query: 272 ----PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
               P  +    + ++ A G  H L + GDG V   G +  G L D       RP+    
Sbjct: 589 QRLFPVQVAGLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPV---- 644

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +V  L G+    ++ G  HS  + G                          + ++  WG
Sbjct: 645 -QVPGLTGITA--VSGGRSHSMALHG--------------------------DGSVRAWG 675

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
           +  +GQLG G    ++ P VV
Sbjct: 676 YNGYGQLGDGTFTSRVRPAVV 696



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 157/412 (38%), Gaps = 77/412 (18%)

Query: 23   KIEEEEEEQQV--VKVWS--------------WGAGTDGQLGTGRLHDELSPQLLNLSSL 66
            +IE  +  Q V  V+ W+              WG    GQLG G      +P ++    L
Sbjct: 1098 RIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVR--GL 1155

Query: 67   SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
            + V  ++ G  H LAL S      G V++WG    GQLG G  +    P  V        
Sbjct: 1156 TGVVAVSTGAWHSLALRSD-----GTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQ---- 1206

Query: 127  TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
             +  I AG  H+  V   G ++  G   FGQLG G   S   PV+V      NV  +A G
Sbjct: 1207 KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGL--SNVTSVAGG 1264

Query: 187  MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
              HSL LL D     +  +G+   GQLG   D   +    +V +   D  +V + A    
Sbjct: 1265 DHHSLALLAD---GSLGAWGNNAAGQLG---DGTGTTRYSRVWVKGVD-GVVEVRAGAAH 1317

Query: 247  SAALSAEGHLYTWG--------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
            + AL  +G ++TWG         G +ST     P+ +P     +    G  H   +   G
Sbjct: 1318 TLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAVGPKG 1377

Query: 299  EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
             V   G + HG L   +  +   PL     +V  L  V V+  + GA+            
Sbjct: 1378 TVWAWGRNSHGQLGLGDNANRAEPL-----RVKELAEVSVV--SGGAD------------ 1418

Query: 359  RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                          F   +  +  + +WG   HG LGLG    +  P  V L
Sbjct: 1419 --------------FSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVAL 1456



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 164/429 (38%), Gaps = 107/429 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G   D   P  + +S L+SV  +A GG+H +AL        G V++
Sbjct: 471 VWAWGRNAAGQLGDGSTRDRARP--VAVSGLTSVVAVATGGSHTMALRGD-----GTVWA 523

Query: 96  WGRGSSGQLGHGEMVDALYPKPV------------TFF------DGHRYT---------- 127
           WG  + GQLG G  VD L P  V            T+F      DG  +T          
Sbjct: 524 WGYNALGQLGDGTTVDRLTPVRVARLDSVVAVAAGTYFSMALRGDGTVWTWGEGFEGQVG 583

Query: 128 ------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
                             +T ++AG  H+  V   G ++  GD   GQLG G +     P
Sbjct: 584 DGGGVQRLFPVQVAGLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRP 643

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQ 227
           V+V       +  ++ G  HS+ L  D     V  +G    GQL  G    R+R    P 
Sbjct: 644 VQVPGLT--GITAVSGGRSHSMALHGD---GSVRAWGYNGYGQLGDGTFTSRVR----PA 694

Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSF 281
           V  GL  I+ +  S       AL A+G L  WG       G  +    + P  +      
Sbjct: 695 VVPGLTGIQALHPSHL--HVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGRV 752

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ- 340
            + A+G  H L++  DG VL  G +  G L D        P+ V         GV  ++ 
Sbjct: 753 DRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLV--------RGVPCVRS 804

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
           +A+G  HS                            +A + ++  WG    GQLG G T 
Sbjct: 805 VASGVLHSL--------------------------ALACDGSVWAWGANGRGQLGDGTTA 838

Query: 401 DQIHPKVVN 409
            ++ P  V+
Sbjct: 839 SRVIPARVD 847



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 160/424 (37%), Gaps = 99/424 (23%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLAL------------- 82
             W+WGA   GQLG G   D   P  L L   S++  +A G  H LA              
Sbjct: 871  AWAWGANAHGQLGDGSTSDRAVPGQLKLP--SNIMSVALGETHGLAAGEDGALWAWGANG 928

Query: 83   --------TSPS-------------SVIGGKVFS-----------WGRGSSGQLGHGEMV 110
                    T+PS             SV  G+ FS           WG   SGQLG G   
Sbjct: 929  SGQLGEGSTTPSPTPVRVKGLEGVASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNH 988

Query: 111  DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSP 169
                PK VT        +  +SAG +H   + + G ++T GD T GQLG G    +   P
Sbjct: 989  SQRVPKQVTSVK----RVRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWP 1044

Query: 170  VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
             +V     ++V  +A G + S+ +L   +G   + +GS + GQLG  K   R   + QV 
Sbjct: 1045 RQVPEL--RDVEAVAAGEQFSVAVL---VGGGAHAWGSNEYGQLGDGKTGPRLTPV-QVR 1098

Query: 230  IGLHDIE--IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSF 281
            I    +   +  + A    + AL A+G +  WG       G  +T     P  +      
Sbjct: 1099 IEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTGV 1158

Query: 282  SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
               + G  H L L  DG V   G +  G L D   +S T P+ VA  +       KV+ I
Sbjct: 1159 VAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQ-------KVVAI 1211

Query: 342  AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
             AG  H+  V                            + ++  WG+   GQLG G    
Sbjct: 1212 GAGGYHALAVR--------------------------SDGSVWAWGYNAFGQLGDGTAES 1245

Query: 402  QIHP 405
            ++ P
Sbjct: 1246 RLLP 1249



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 120/298 (40%), Gaps = 57/298 (19%)

Query: 124 HRYTIT----HISAGWNHSGFVSDSGCLFTCGDGTFGQL-GHGDYRSHSSPVKVSSFVNK 178
            R T+T     I+AG  HS +VS +G ++  G  T GQL G        +P  + S   +
Sbjct: 43  QRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPS--PR 100

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIE 236
           ++  +  G  HSL L  D  G  V+ +G    GQL  G + DR+     P    GL D  
Sbjct: 101 DIVSVVSGEAHSLAL--DEAGT-VWAWGGNSSGQLGDGTTTDRV----TPMQVAGLTD-- 151

Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNS------TSDVNCPQSLPSSLSFSQAALGWNH 290
           +V ++A    S AL  +G ++ WG  F+       T     P+ +P        A G++ 
Sbjct: 152 VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDF 211

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            L +  DG V   G +  G L D        P+ VA     ++ G+           SAV
Sbjct: 212 TLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVA-----HISGI-----------SAV 255

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             G +H V L                  ++  + TWG    GQLG G   D+  P  V
Sbjct: 256 TAGTYHAVAL-----------------GKDGGVWTWGANSSGQLGDGAWSDRAVPARV 296



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 154/409 (37%), Gaps = 61/409 (14%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V +WG    GQLG G       P L+    +  V  +A G  H LAL        G V++
Sbjct: 771  VLAWGENASGQLGDGTTTHRAGPVLVR--GVPCVRSVASGVLHSLALACD-----GSVWA 823

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG    GQLG G     + P  V   DG +  +   + G      ++D G  +  G    
Sbjct: 824  WGANGRGQLGDGTTASRVIPARV---DGLQGAVAVAAGGDASLALLAD-GTAWAWGANAH 879

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G     + P ++   +  N+  +A G  H L   +D     ++ +G+   GQLG 
Sbjct: 880  GQLGDGSTSDRAVPGQLK--LPSNIMSVALGETHGLAAGED---GALWAWGANGSGQLG- 933

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +        P    GL  +  V  SA    S A+  +G  + WG       G  +    
Sbjct: 934  -EGSTTPSPTPVRVKGLEGVASV--SAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQ 990

Query: 270  NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
              P+ + S       + G +HV+ L  DG V   G +  G L D     ++ P  +   +
Sbjct: 991  RVPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGD----GTSAPTWMWPRQ 1046

Query: 330  VSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFINVIAEN- 380
            V  L  V+   +AAG + S  V         G   + +L      P   P  + + A   
Sbjct: 1047 VPELRDVEA--VAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKL 1104

Query: 381  ----RAIMTW--------------GWGE--HGQLGLGNTCDQIHPKVVN 409
                R +  W               WG+  HGQLG G T  +  P VV 
Sbjct: 1105 RQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVR 1153



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 22/195 (11%)

Query: 38   SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
            +WG    GQLG G      S   + +  +  V  +  G AH LAL        G V++WG
Sbjct: 1279 AWGNNAAGQLGDGTGTTRYS--RVWVKGVDGVVEVRAGAAHTLALRGD-----GTVWTWG 1331

Query: 98   RGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
              +  QLG G+      + P+PV    G    +T I AG  HS  V   G ++  G  + 
Sbjct: 1332 DNTHSQLGAGDDSTRTRIVPRPVPGLSG----VTAIGAGARHSFAVGPKGTVWAWGRNSH 1387

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG GD  + + P++V      +V  ++ G   SL + +D     V  +GS   G LG+
Sbjct: 1388 GQLGLGDNANRAEPLRVKELAEVSV--VSGGADFSLAMQRD---GTVSSWGSSLHGALGL 1442

Query: 216  SKDRIRS----VSLP 226
                 RS    V+LP
Sbjct: 1443 GTAGQRSSPGQVALP 1457



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 124/288 (43%), Gaps = 35/288 (12%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--VDALYPKPVTFFDGHRYTIT 129
           +A G  H L   SP+    G V++WG  +SGQLG GE   +  L P P+         I 
Sbjct: 54  IAAGSQHSL-YVSPT----GAVWAWGGNTSGQLG-GEATPLQRLAPAPLP----SPRDIV 103

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            + +G  HS  + ++G ++  G  + GQLG G      +P++V+     +V  +A G  H
Sbjct: 104 SVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLT--DVVAVAAGDFH 161

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           SL L  D     V+ +G+   GQLG  +        P+   GL    +V ++A  D + A
Sbjct: 162 SLALRGD---GTVWAWGTNFHGQLG--RGHTEPGLTPEPVPGLEG--VVALAAGFDFTLA 214

Query: 250 LSAEGHLYTWGRGFNSTSDVN--------CPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
           +  +G +  W  G NS+  +          P  +      S    G  H + L  DG V 
Sbjct: 215 VMDDGTVRAW--GANSSGQLGDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVW 272

Query: 302 MLGGSHHGMLSDPERVSSTRPLSV-ALEK---VSNLDGVKVIQIAAGA 345
             G +  G L D        P  V  LE+   V+++D   +  + AG+
Sbjct: 273 TWGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSLALLEAGS 320


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 175/431 (40%), Gaps = 84/431 (19%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNL--------SSLSSVSMLACGGAHVLALTSPSSVIG 90
           WG G  G+LG G L    SP                   + LACGGAH L LT       
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTES----- 91

Query: 91  GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G+VF+ G    GQLG G  V  +L P  V+ FD     +  +SAG +HS  V+  G LF 
Sbjct: 92  GRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD---EKVVEVSAGNHHSCAVTADGKLFA 148

Query: 150 CGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G  + GQLG G       S+P KV    +  V  +A G  HS+   ++    +V  +G+
Sbjct: 149 WGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEE---GEVLSWGA 205

Query: 208 GKRGQLGVS-KDRIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              G+LG   K  I   S+      P++   L  ++I  I+A    SA +  +G L+ +G
Sbjct: 206 AGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 265

Query: 261 ----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDP 314
               +GF  + D   P  +       + A G  H  V+T  G++   G + +G   L   
Sbjct: 266 QKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGT 325

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
           + V S   L  +L K        V +++ G +H+AV++G                     
Sbjct: 326 DMVRSPEVLKSSLFK------FPVSKVSCGWKHTAVISGG-------------------- 359

Query: 375 NVIAENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
                   I TWGWG              GQLG GN  D   P +V    EF      + 
Sbjct: 360 -------DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV----EFGKNARAVH 408

Query: 423 VFCGSGFTYAI 433
           V CG   T AI
Sbjct: 409 VSCGFNHTGAI 419


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLH-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDYKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G DY+  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R    P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDR--YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D  +P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +         I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSD--IQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLH-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDYKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G DY+  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R    P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDR--YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D  +P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
                  + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 86/182 (47%), Gaps = 10/182 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WG    GQLG G     + SPQL+          +A GGAH   LT     + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 GV 215
           G 
Sbjct: 328 GT 329



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 136/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +         I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLS--DIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G + +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---LSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 117/248 (47%), Gaps = 23/248 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           +V++WG  +DGQLG  +  +E      N+ SLS + +  +ACG  H LAL+  S     +
Sbjct: 104 QVYAWGLDSDGQLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----E 157

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VF WG+   GQLG G E      P+ +    G  +    ++AG  HS  ++ SG +F  G
Sbjct: 158 VFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGWG 215

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGYG 272

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN------ 264
           QLG   +       P+    L    +  I+     ++A + + G +Y++G G N      
Sbjct: 273 QLG--HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 265 STSDVNCP 272
           STS+   P
Sbjct: 331 STSNRKSP 338


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R T+  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISDR-TVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 158/383 (41%), Gaps = 56/383 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G       +   PQ+    S  +V  +ACGG H + L        G+V++ 
Sbjct: 4   WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 59  GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C   L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+              +++ P            +  I  +
Sbjct: 286 -RRVLELMGSEVTQIACGRQHT--------------LAFVP-----------SSGLIYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN 409
           G G  GQLG G+TC+   P  V 
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S P++   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + P+ L S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SP+LL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLADIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Strongylocentrotus purpuratus]
          Length = 539

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 180/434 (41%), Gaps = 83/434 (19%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +WGA + GQLG G   D L P+  NL +    V  +  GG H + LT       G +   
Sbjct: 153 AWGANSYGQLGLGHQKDHLLPE--NLKTFPEDVKTIVGGGGHTVFLTG-----NGDLHVC 205

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G  + GQLG G   D    K V   D     +  I+ GWNH+  ++++  L   G  T G
Sbjct: 206 GSNNKGQLGLGHTSD--INKLVRVPD--LRPLKKIACGWNHTVAITENDELLCWGSNTHG 261

Query: 157 QLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QL H +   +    +++S         I+ G+RH+L +  D    Q++ +G+GK+GQLG 
Sbjct: 262 QLTHKESIVTKPRQIELSGVDCPRFAAISGGLRHTLAVSTD---GQLWTWGAGKKGQLGW 318

Query: 216 SKDRIR-------SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           +  ++R        V +P V     D++ V ++A    SAALS  G LY WG        
Sbjct: 319 TDSKMRVPHQWNKPVHIP-VKEDDVDVKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLA 377

Query: 264 --NSTSDVNCPQSLPSS----LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
              S++ ++ P+ L  +    L+      GW H+L +T D  V   G + +G L  P   
Sbjct: 378 QPKSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDESVYTWGRNDYGQLGRPAAK 437

Query: 318 S----STRPLSVALEKVSNLDGVKV----------IQIAAGAEHSAVVTGKFHWVRLFII 363
           S    S    S A    +  D   V           QI  GAEHS  +T           
Sbjct: 438 SIPNGSAESESNATPTTTTPDCCHVPTEISILKNAKQIVCGAEHSLAIT----------- 486

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-- 421
                          ++  ++ WGW EHG    G   +   PK      + Q  D Q+  
Sbjct: 487 ---------------KDDKLLAWGWNEHGMCADGTKTNVFLPK------QVQGLDGQVAS 525

Query: 422 EVFCGSGFTYAISR 435
           +V  G+G  +A  +
Sbjct: 526 KVGVGAGHCFAFCQ 539



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 164/417 (39%), Gaps = 92/417 (22%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
           G+   GQLG G   D    +L+ +  L  +  + CG  H +A+T       G +    RG
Sbjct: 47  GSNNKGQLGLGHTSD--INKLVRVPDLRPLKQIVCGWNHTVAITGTD----GSLELLHRG 100

Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL---------FTC 150
              ++G       L P P   ++        + AG +H   V  +  L            
Sbjct: 101 QFNEVGR-----ELIPVPECSWEETLPVAVRVGAG-SHESCVGVADVLNGVYTLFAYLAW 154

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G  ++GQLG G  + H  P  + +F  ++V  I  G  H++ L  +     ++  GS  +
Sbjct: 155 GANSYGQLGLGHQKDHLLPENLKTF-PEDVKTIVGGGGHTVFLTGN---GDLHVCGSNNK 210

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
           GQLG+  + D  + V +P +        +  I+   + + A++    L  WG   +    
Sbjct: 211 GQLGLGHTSDINKLVRVPDLR------PLKKIACGWNHTVAITENDELLCWGSNTHGQLT 264

Query: 265 ------------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML- 311
                         S V+CP+       F+  + G  H L ++ DG++   G    G L 
Sbjct: 265 HKESIVTKPRQIELSGVDCPR-------FAAISGGLRHTLAVSTDGQLWTWGAGKKGQLG 317

Query: 312 --SDPERVSS--TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVR 359
                 RV     +P+ + + K  ++D VK +Q+AAGA HSA ++        G   W +
Sbjct: 318 WTDSKMRVPHQWNKPVHIPV-KEDDVD-VKFVQVAAGAYHSAALSDMGILYIWGCNKWSQ 375

Query: 360 LF-------IISYTPFFPPFF--------------INVIAENRAIMTWGWGEHGQLG 395
           L        I +     P  F              +  I E+ ++ TWG  ++GQLG
Sbjct: 376 LAQPKSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDESVYTWGRNDYGQLG 432



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 135/345 (39%), Gaps = 67/345 (19%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
            V  +  GG H + LT       G +   G  + GQLG G   D    K V   D     
Sbjct: 23  DVKTIVGGGGHTVFLTG-----NGDLHVCGSNNKGQLGLGHTSD--INKLVRVPD--LRP 73

Query: 128 ITHISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIA 184
           +  I  GWNH+  ++ + G L     G F ++G         PV   S+        ++ 
Sbjct: 74  LKQIVCGWNHTVAITGTDGSLELLHRGQFNEVGR-----ELIPVPECSWEETLPVAVRVG 128

Query: 185 CGMRHSLVLLKDCLGNQVY------GFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIE 236
            G   S V + D L N VY       +G+   GQLG+   KD +    LP+  +     +
Sbjct: 129 AGSHESCVGVADVL-NGVYTLFAYLAWGANSYGQLGLGHQKDHL----LPE-NLKTFPED 182

Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNH 290
           +  I   G  +  L+  G L+  G       G   TSD+N    +P      + A GWNH
Sbjct: 183 VKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKKIACGWNH 242

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            + +T + E+L  G + HG L+  E +  T+P  + L   S +D  +   I+ G  H+  
Sbjct: 243 TVAITENDELLCWGSNTHGQLTHKESI-VTKPRQIEL---SGVDCPRFAAISGGLRHTLA 298

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
           V+                           +  + TWG G+ GQLG
Sbjct: 299 VS--------------------------TDGQLWTWGAGKKGQLG 317



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 46/230 (20%)

Query: 35  KVWSWGAGTDGQLG----TGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPS 86
           ++W+WGAG  GQLG      R+  + +  +        V +    +A G  H  AL+   
Sbjct: 304 QLWTWGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDM- 362

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPV--TFFDGHRYTITHISAGWNHSGFVSD 143
               G ++ WG     QL   +  + +  PK +    FDG   TI  I +GW H   +++
Sbjct: 363 ----GILYIWGCNKWSQLAQPKSSNPISTPKRLDPALFDG--LTIKGIHSGWTHMLAITE 416

Query: 144 SGCLFTCGDGTFGQLG--------HGDYRSHSS-------------PVKVSSFVNKNVHQ 182
              ++T G   +GQLG        +G   S S+             P ++S  + KN  Q
Sbjct: 417 DESVYTWGRNDYGQLGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEIS--ILKNAKQ 474

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
           I CG  HSL + KD   +++  +G  + G    +     +V LP+   GL
Sbjct: 475 IVCGAEHSLAITKD---DKLLAWGWNEHGM--CADGTKTNVFLPKQVQGL 519



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 33/178 (18%)

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN 289
           ++  I   G  +  L+  G L+  G       G   TSD+N    +P      Q   GWN
Sbjct: 23  DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKQIVCGWN 82

Query: 290 HVLVLTG-DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           H + +TG DG + +L   H G  ++  R     P     E +        +++ AG+  S
Sbjct: 83  HTVAITGTDGSLELL---HRGQFNEVGRELIPVPECSWEETLP-----VAVRVGAGSHES 134

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
            V         +    YT F             A + WG   +GQLGLG+  D + P+
Sbjct: 135 CVGVAD-----VLNGVYTLF-------------AYLAWGANSYGQLGLGHQKDHLLPE 174


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 158/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  ++ G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S PQ+   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V Q A G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQAACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  +ACG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L DI+IV ++     S ALS    ++ WG+        G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +     + PQ + S L   F Q A G  H  VLT  G +   G +  G L   +     
Sbjct: 173 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P       + +L   K++ I  G +H+A +T                          + 
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             + T+G G +GQLG  +T  +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  +ACG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +QAA G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SPQL+   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V Q ACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 21/247 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           +V++WG  +DGQLG  +  +E      N+ SLS + +  +ACG  H LAL+  S     +
Sbjct: 104 QVYAWGLDSDGQLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----E 157

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VF WG+   GQLG G +      P+ +    G  +    ++AG  HS  ++ SG +F  G
Sbjct: 158 VFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGWG 215

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              FGQLG  D      P  + S  ++ +  I CG  H+  L K+     V+ FG+G  G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGYG 272

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------S 265
           QLG +      ++  +V   +  I           SA + + G +Y++G G N      S
Sbjct: 273 QLGHNSTS-HEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 266 TSDVNCP 272
           TS+   P
Sbjct: 332 TSNRKSP 338


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      V  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  + G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S  +  + Q+ACG  HSL L K    ++V+ +G  K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  +  S P++   L  I  + ++A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QIA G +H++                  F P         +  I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G+T ++  P  V 
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   +  +  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P +V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113

Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
           GQLG+  S++ IR   +P+    L DI+IV ++     S ALS    ++ WG+       
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170

Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
            G +     + P+ L S L   F Q A G  H  VLT  G +   G +  G L   +   
Sbjct: 171 LGLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              P       + +L   K++ I  G +H+A +T                          
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALT-------------------------- 258

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V+ WG    GQLG G     + SP+LL   SL  +  +  A GGAH   LT     + G
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +F WGR   GQLG  +  D   P  +      +  I +I  G +H+  ++  G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGH       +P KV   +   V QIACG +H+   +      ++Y FG G  G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325

Query: 212 QLG 214
           QLG
Sbjct: 326 QLG 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG  S GQLG  G       P+ +      +  I  ++ G+ HS  +S +  +F  G   
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLADIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G D +  +SP  + S +     Q+A G  HS VL    L   ++G+G  K GQL
Sbjct: 166 YGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G++ +  R V  P +   L   +IV I    D +AAL+ EG ++T+G       G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
               P+ +   +    +Q A G  H    +   G +   G   +G L      +   P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 325 V 325
           V
Sbjct: 341 V 341


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +    P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 105 EVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 158

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    +R  + +I+ G   S  V DSG ++  G 
Sbjct: 159 VFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNR-VVVNIACGQMCSMAVVDSGEVYVWGY 217

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +HS+P ++++     V ++ACG  H+LVL  D    QVY +G+   GQ
Sbjct: 218 NGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDD---GQVYAWGANSYGQ 274

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 275 LGTGNKSNQSYPTPVVVEKDRIIEIAACHST-HTSAAKTQGGHVYMWGQ 322



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 25/290 (8%)

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
           L  +    +    G  VL +T     +  ++F  G    G LG G++   + P+ +    
Sbjct: 28  LQLIRQACVFGSAGNEVLYMT-----VNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLS 82

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVH 181
           G +       +G  H    +  G +FT G   + QLG+G     S P  +S+   NK V 
Sbjct: 83  GKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVI 141

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
           ++ACG  HSLVL  D    +V+ +G    GQ+G      + +   +VT  L +  +V I+
Sbjct: 142 EVACGSYHSLVLTSD---GEVFAWGCNNSGQVGSGSTANQPIP-RRVTGCLQNRVVVNIA 197

Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLV 293
                S A+   G +Y WG       G  S+ + + P  + +   +   + A G+ H LV
Sbjct: 198 CGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLV 257

Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
           LT DG+V   G + +G L    + + + P  V +EK       ++I+IAA
Sbjct: 258 LTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK------DRIIEIAA 301


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 189/458 (41%), Gaps = 81/458 (17%)

Query: 6   MEETEKGKSALINNAKPKIEEEEEEQQVVKVWS--WGAGTDGQLGTGRLHDELSPQLLNL 63
           M    K + A    AK K+E      +  K W   WG G  G+LG      +  P L   
Sbjct: 1   MRSVIKRRRAYGLTAKNKVELS---GKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRA 57

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
                   ++CGGAH L LT       G+VF+ G  SSGQLG     ++ +  PV    G
Sbjct: 58  LESHEPCSVSCGGAHTLILTDK-----GRVFATGLNSSGQLGVPLKRESSF-DPVEVH-G 110

Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNV 180
                 HI+AG  HS  ++ SG  +  G  + GQLG G  R+ S   +P K+ S     +
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGK-RAKSVYITPQKMESLAGMRL 169

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-----DRIRSVS--LPQVTIGLH 233
             +A G  HSL L +     QV  +G+ + G LG  +     D  +  +   P++   L 
Sbjct: 170 KALALGTDHSLGLAET---GQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLE 226

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
            ++I  +SA    SA     G +Y++G+      G  + +D + P  +P     S  + G
Sbjct: 227 KLQIRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCG 286

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H   +T DG++   G + HG L    R SS +PL     ++ +L    + +I+ G +H
Sbjct: 287 GYHTGAITQDGDIYTWGSNEHGCLGSGFRASS-KPL-----RLESLAEAFMSEISCGWKH 340

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG------------EHGQLG 395
           +A ++  +                           I +WGWG              GQLG
Sbjct: 341 TAAISDGY---------------------------IFSWGWGGSYGTYATQAESSGGQLG 373

Query: 396 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           +G   D   P  +    E  +R + L V CG   T AI
Sbjct: 374 VGTDFDFFEPVPI----EMDDRLSALHVSCGFNHTAAI 407



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 23/173 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++S+G G+  QLG G  +D   P    +  L  VS ++CGG H  A+T       G +++
Sbjct: 249 IYSFGQGSMCQLGLGNNNDASQP--CPIPDLPRVSSISCGGYHTGAITQD-----GDIYT 301

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---- 151
           WG    G LG G    +   KP+         ++ IS GW H+  +SD G +F+ G    
Sbjct: 302 WGSNEHGCLGSGFRASS---KPLRLESLAEAFMSEISCGWKHTAAISD-GYIFSWGWGGS 357

Query: 152 DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
            GT+        GQLG G       PV +      +   ++CG  H+  +L++
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILEE 410


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 131/292 (44%), Gaps = 40/292 (13%)

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           G  HV+ALT+      GKVFS+G    GQLGHG+      PK V      R  +T +   
Sbjct: 74  GCEHVIALTN-----NGKVFSFGFNVKGQLGHGDQTSINSPKQVEALS--RKFVTAVGCS 126

Query: 135 WNHSGF-VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           + H+ F  +D   +++CG   +GQLG G+    +SP  + +   K +  I CG  HS+V 
Sbjct: 127 YYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVV- 185

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
               +  +++ FG    GQLG++     ++SLP+    L   +I    A G         
Sbjct: 186 --SSIDGEIFSFGRNDSGQLGITGSD-GNISLPKEVKNLKSTQI----ACGYYHTVAINN 238

Query: 254 GHLYTWGR--------GFNSTSDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDGE 299
           G LY+WG+        G  S  ++     LP+ +           A G  H L L   G+
Sbjct: 239 GQLYSWGKNDSGQLGIGIYSAKEI-----LPTLVRDLEDQEIVSVACGCYHTLALGYAGQ 293

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           +   G + HG L D    +S +PL      +  L   KV QIAAG  HS V+
Sbjct: 294 LFSFGRNSHGQLGDGTTNNSCKPLL-----IQGLIDKKVCQIAAGFYHSIVL 340



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 120/269 (44%), Gaps = 23/269 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV+S+G    GQLG G      SP+ +   S   V+ + C   H    T  S     +++
Sbjct: 86  KVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYH----TIFSCADEMEIY 141

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S GR   GQLG G + D   P  +   +G R  I  I  G  HS   S  G +F+ G   
Sbjct: 142 SCGRNDYGQLGLGNLDDKNSPTLIEALNGKR--IVSIGCGQYHSVVSSIDGEIFSFGRND 199

Query: 155 FGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG  G   + S P +V    N    QIACG  H++ +       Q+Y +G    GQL
Sbjct: 200 SGQLGITGSDGNISLPKEVK---NLKSTQIACGYYHTVAI----NNGQLYSWGKNDSGQL 252

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSD 268
           G+     + + LP +   L D EIV ++     + AL   G L+++GR       + T++
Sbjct: 253 GIGIYSAKEI-LPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTN 311

Query: 269 VNCPQSLPSSL---SFSQAALGWNHVLVL 294
            +C   L   L      Q A G+ H +VL
Sbjct: 312 NSCKPLLIQGLIDKKVCQIAAGFYHSIVL 340



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++S G    GQLG G L D+ SP L+   +   +  + CG  H     S  S I G++
Sbjct: 138 MEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYH-----SVVSSIDGEI 192

Query: 94  FSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FS+GR  SGQLG  G   +   PK V          T I+ G+ H+  + ++G L++ G 
Sbjct: 193 FSFGRNDSGQLGITGSDGNISLPKEVKNLKS-----TQIACGYYHTVAI-NNGQLYSWGK 246

Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQLG G Y +    P  V    ++ +  +ACG  H+L L       Q++ FG    G
Sbjct: 247 NDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLAL---GYAGQLFSFGRNSHG 303

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           QLG       +   P +  GL D ++  I+A
Sbjct: 304 QLG--DGTTNNSCKPLLIQGLIDKKVCQIAA 332



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 144/354 (40%), Gaps = 49/354 (13%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGG------KVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
           +V  +A G  H L LT    V  G         S G  +  Q  +         K V   
Sbjct: 2   NVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKL 61

Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
            G        S G  H   ++++G +F+ G    GQLGHGD  S +SP +V +   K V 
Sbjct: 62  RGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVT 121

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
            + C   H++    D +  ++Y  G    GQLG+    +   + P +   L+   IV I 
Sbjct: 122 AVGCSYYHTIFSCADEM--EIYSCGRNDYGQLGLG--NLDDKNSPTLIEALNGKRIVSIG 177

Query: 242 ANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
                S   S +G ++++GR  +       S  +++ P+ +  +L  +Q A G+ H + +
Sbjct: 178 CGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVK-NLKSTQIACGYYHTVAI 236

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
             +G++   G +  G L     + S + +   L  V +L+  +++ +A G  H+  +   
Sbjct: 237 N-NGQLYSWGKNDSGQLGIG--IYSAKEILPTL--VRDLEDQEIVSVACGCYHTLALG-- 289

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +  +LF                       ++G   HGQLG G T +   P ++
Sbjct: 290 -YAGQLF-----------------------SFGRNSHGQLGDGTTNNSCKPLLI 319


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 173/401 (43%), Gaps = 69/401 (17%)

Query: 66   LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD---ALYPKPVTFFD 122
            L + ++LACG  H       + V  G V++WGR   G+LG G+++       P  V    
Sbjct: 771  LPTQNVLACGQDHA------AIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLH 824

Query: 123  GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
             H   +  ++ G  H+  V+  G L++ G  ++GQLG GD   HS PV V +   +    
Sbjct: 825  MHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLS 884

Query: 183  IACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGI 240
            +ACG  H+LVL +D    +++ FG G  GQL  G  +D+I    LP++   L    IVGI
Sbjct: 885  VACGQLHTLVLTQD---QRLWSFGWGVHGQLGHGDVEDQI----LPKLVNQLSKCAIVGI 937

Query: 241  SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVL 292
            SA    S AL+ +G ++ +G       G  S      P  L   SS   S    G+   +
Sbjct: 938  SAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNI 997

Query: 293  VLTGD--------------GEVLMLGGSHHGMLS----DPERVSSTRPLSVALEKVSNLD 334
             +T +               + L L    H        DP   + TR  S+ LE    L 
Sbjct: 998  AITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLP 1057

Query: 335  GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
             +    I A  +    ++G  H++ L  +                   + +WG  E GQL
Sbjct: 1058 SLVPTNIQAPIK-KMTMSGN-HYLMLTTVG-----------------DLYSWGSNEAGQL 1098

Query: 395  GLGNTCDQIHPKVVNLGDEFQNRDTQ-LEVFCGSGFTYAIS 434
            G+GN   Q  P ++N     ++RD Q + V  GS F+ A++
Sbjct: 1099 GMGNRVSQSVPVLIN-----RSRDDQFVAVAAGSRFSLAVN 1134



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 143/323 (44%), Gaps = 43/323 (13%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            K++SWG+ + GQLG G  +    P  +   S      +ACG  H L LT        +++
Sbjct: 848  KLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQDQ-----RLW 902

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            S+G G  GQLGHG++ D + PK V      +  I  ISAG+ HSG +++ G ++  G  +
Sbjct: 903  SFGWGVHGQLGHGDVEDQILPKLVNQLS--KCAIVGISAGYAHSGALTNDGQVWMFGSSS 960

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK---RG 211
            FGQLG G     + PV++ +  + +V  + CG   ++ +  +    +VY +G      R 
Sbjct: 961  FGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSN--PQKVYTWGKSPLELRQ 1018

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG-HLYTWGRGFNSTSDVN 270
             L +++ R +S            +          R  +L  E  HL              
Sbjct: 1019 ALQLARKRHQSSRYSNPDPHHQTVT---------RLPSLPLENQHLL------------- 1056

Query: 271  CPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
             P  +P+++     +  +  NH L+LT  G++   G +  G L    RVS + P+ +   
Sbjct: 1057 -PSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRS 1115

Query: 329  KVSNLDGVKVIQIAAGAEHSAVV 351
            +       + + +AAG+  S  V
Sbjct: 1116 RDD-----QFVAVAAGSRFSLAV 1133


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 171/409 (41%), Gaps = 74/409 (18%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGK 92
            ++++WG  T GQLG G    +     + + SL  + + M++ GG H + +          
Sbjct: 1214 ELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDR-----SFH 1268

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            ++SWG G  GQLGHG       PK +  F G +  I+ I+ G+ H+  +   G LF  G 
Sbjct: 1269 IYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQK--ISSIATGYWHTLVLRSGGDLFAFGS 1326

Query: 153  GTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQ---------IACGMRHSLVLLKDCLGNQV 202
               GQLG  D + H   P +V++    ++H          I CG  HS+  L+   G+ V
Sbjct: 1327 NEHGQLGLNDLKHHLPIPTRVNT---ADIHHAGQPTRVTGIFCGHSHSV--LRTSHGD-V 1380

Query: 203  YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            Y FG+  +GQLG       S   P++  GL    I  I+     +   +    +Y WG+G
Sbjct: 1381 YSFGANAKGQLG--HGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQG 1438

Query: 263  FN------STSDVNCPQ--SLPSSLSFSQAALGWNHVLVLT---GD----GEVLMLGGSH 307
             +      S  +   P+   L  +    +   G  H   LT   GD    G V + G S 
Sbjct: 1439 EHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSE 1498

Query: 308  HGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
            HG L    DP   S  +        + +++   V+ +A+GAE +A++T            
Sbjct: 1499 HGKLGIGGDPRSPSLDKAYPAI---IPSINSANVVDLASGAEFNALITS----------- 1544

Query: 365  YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                           N A+  WG G HGQ+G G   D   P  V+L  E
Sbjct: 1545 ---------------NGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSE 1578



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 9/170 (5%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSP--SSVIGGKV 93
            V+ WG G    LGTG   +EL P+L+ L     V  + CG  H   LT P   S  GG V
Sbjct: 1432 VYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNV 1491

Query: 94   FSWGRGSSGQLGHG-----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
            +  G    G+LG G       +D  YP  +   +     +  +++G   +  ++ +G L+
Sbjct: 1492 YICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSAN--VVDLASGAEFNALITSNGALY 1549

Query: 149  TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
              G GT GQ+G+G  +    P +VS    KN +Q       S + L   +
Sbjct: 1550 MWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFIVDESGSTITLSSSM 1599


>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 747

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 160/384 (41%), Gaps = 64/384 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VWSWG   DGQLG G   D+L+P L  L+   SV     G  H + L   ++     V+
Sbjct: 419 RVWSWGDNEDGQLGNGIGADKLTPALTGLTGAVSV---VAGNRHTVVLKGDTT-----VW 470

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S G++G G   +   P  V    G    IT ISAG  HS  +   G ++  G   
Sbjct: 471 AWGVNSRGEVGDGTNANTSQPVRVLGLSG----ITAISAGAYHSLALRTDGTVWAWGFNR 526

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG+G     + PV+V+      V  IA G  HSL L  D     V+ +G    GQ+G
Sbjct: 527 YGQLGNGGTVDQNQPVQVAGL--SGVTAIAAGHSHSLALCGD---GTVWAWGYNFDGQIG 581

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
              +      LP   +GL    +  I+A G  S AL ++G +++WG       G  + + 
Sbjct: 582 SGTNNWH--ILPVQAVGLS--SVTAITAGGYHSLALRSDGTVWSWGYNGSGQLGNGALAS 637

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           +N P  + +       A G  H L L  DG V   G +  G + D    +   P+ VA  
Sbjct: 638 LNAPGPVSNLTGVVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVA-- 695

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
               + G  V+ + AG  HS                            +A      TW W
Sbjct: 696 ---GMSG--VVSVIAGDHHS----------------------------MAMRSDGTTWAW 722

Query: 389 GEH--GQLGLGNTCDQIHPKVVNL 410
           G +  GQLG G   D I P  V L
Sbjct: 723 GANTEGQLGDGTRNDSIIPVRVEL 746



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 166/408 (40%), Gaps = 62/408 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G   +  SP  + + +L+    +A G +H LAL S      G V+
Sbjct: 70  SVWAWGFNRQGQLGNGLFTN--SPTPVKVKNLTDAVAVASGDSHSLALRSD-----GTVW 122

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG   SGQLG G    +  P  V    G    +  +++G+ HS  +   G ++  GD  
Sbjct: 123 AWGDNYSGQLGTGSTAVSAEPVQVQGLSG----VLSVASGFAHSAALRSDGTVWAWGDNR 178

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           + QLG     S S PV+V       V  +A G   +L L  D     V+ +G  + GQLG
Sbjct: 179 YRQLGPLTAGSSSVPVQVPGL--GGVIAVAAGGNTTLALRAD---GTVWAWGDNRSGQLG 233

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----N 270
                + +   P   +GL    +V +SA      AL + G  +TW  G N+   +     
Sbjct: 234 --DGTVTTRGNPLQVLGL--TGVVTLSAGASHCVALRSNGTAWTW--GLNTMGQLGDGTT 287

Query: 271 CPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             +S+P+ +  +    A  G  H L +  DG V   G + +  L +    SS  P+   L
Sbjct: 288 TQRSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGL 347

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGK---FHW-----VRLFIISYTPFFPPFFINV--- 376
                      I + AG +HS  +      + W      +L   +Y P   P  +     
Sbjct: 348 S--------GGITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTL 399

Query: 377 ------------IAENRAIMTWGWG--EHGQLGLGNTCDQIHPKVVNL 410
                       +  + A   W WG  E GQLG G   D++ P +  L
Sbjct: 400 GNPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNGIGADKLTPALTGL 447



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 145/328 (44%), Gaps = 43/328 (13%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           W+WG  T GQLG G       P  + L+    V     G  H LA+ S      G V++W
Sbjct: 272 WTWGLNTMGQLGDGTTTQRSVPAQVGLTD---VMAAVAGNYHSLAVRSD-----GAVWAW 323

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G     QLG+G M  +L P       G    IT + AG+ HS  +   G +++ GD  FG
Sbjct: 324 GDNRYRQLGNGNMTSSLLPIQAGLSGG----ITLV-AGFKHSLTLRADGTVWSWGDNVFG 378

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--G 214
           QLG G Y+   SPV+V++    N   +A G  HS  + +D  G +V+ +G  + GQL  G
Sbjct: 379 QLGDGTYQPRMSPVRVATTTLGN-PGVASGQLHS--VYRDSAG-RVWSWGDNEDGQLGNG 434

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----N 270
           +  D++     P +T     + +V     G+R   +  +G    W  G NS  +V    N
Sbjct: 435 IGADKLT----PALTGLTGAVSVVA----GNRHTVV-LKGDTTVWAWGVNSRGEVGDGTN 485

Query: 271 CPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              S P  +      +  + G  H L L  DG V   G + +G L +   V   +P+ VA
Sbjct: 486 ANTSQPVRVLGLSGITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVA 545

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
                 L GV    IAAG  HS  + G 
Sbjct: 546 -----GLSGVTA--IAAGHSHSLALCGD 566



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 113/294 (38%), Gaps = 48/294 (16%)

Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
           R ++  +S G  HS  V   G ++  G    GQLG+G + +  +PVKV +  +     +A
Sbjct: 49  RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKVKNLTDAVA--VA 106

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
            G  HSL L  D     V+ +G    GQLG     + +   P    GL    ++ +++  
Sbjct: 107 SGDSHSLALRSD---GTVWAWGDNYSGQLGTGSTAVSAE--PVQVQGLSG--VLSVASGF 159

Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
             SAAL ++G ++ WG       G  +    + P  +P        A G N  L L  DG
Sbjct: 160 AHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVPVQVPGLGGVIAVAAGGNTTLALRADG 219

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            V   G +  G L D    +   PL V       L    V+ ++AGA H           
Sbjct: 220 TVWAWGDNRSGQLGDGTVTTRGNPLQV-------LGLTGVVTLSAGASHCV--------- 263

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                             +  N    TWG    GQLG G T  +  P  V L D
Sbjct: 264 -----------------ALRSNGTAWTWGLNTMGQLGDGTTTQRSVPAQVGLTD 300



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 136/349 (38%), Gaps = 58/349 (16%)

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
           L+  +SV+ L+ G  H + + S      G V++WG    GQLG+G   ++  P PV   +
Sbjct: 46  LAGRASVARLSLGQYHSVGVHSD-----GSVWAWGFNRQGQLGNGLFTNS--PTPVKVKN 98

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
                   +++G +HS  +   G ++  GD   GQLG G     + PV+V       V  
Sbjct: 99  --LTDAVAVASGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGL--SGVLS 154

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           +A G  HS  L  D     V+ +G  +  QLG       S S+P    GL    ++ ++A
Sbjct: 155 VASGFAHSAALRSD---GTVWAWGDNRYRQLG--PLTAGSSSVPVQVPGLGG--VIAVAA 207

Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
            G+ + AL A+G ++ WG       G  + +    P  +         + G +H + L  
Sbjct: 208 GGNTTLALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTGVVTLSAGASHCVALRS 267

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
           +G     G +  G L D      + P  V L  V                  A V G +H
Sbjct: 268 NGTAWTWGLNTMGQLGDGTTTQRSVPAQVGLTDV-----------------MAAVAGNYH 310

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            +                  +  + A+  WG   + QLG GN    + P
Sbjct: 311 SL-----------------AVRSDGAVWAWGDNRYRQLGNGNMTSSLLP 342



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG    GQLG G L    +P    +S+L+ V  +A G  H LAL S      G V +
Sbjct: 619 VWSWGYNGSGQLGNGALASLNAPG--PVSNLTGVVSIAAGDYHSLALRSD-----GTVRA 671

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQ+G G + +   P  V    G    +  + AG +HS  +   G  +  G  T 
Sbjct: 672 WGFNFDGQIGDGSLTNRHVPVMVAGMSG----VVSVIAGDHHSMAMRSDGTTWAWGANTE 727

Query: 156 GQLGHGDYRSHSSPVKVSSF 175
           GQLG G       PV+V  F
Sbjct: 728 GQLGDGTRNDSIIPVRVELF 747


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G    R + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386

Query: 274 SLPS 277
           ++P+
Sbjct: 387 TIPT 390



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)

Query: 53  HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
           +D  S + L   S+     +  + CG  H LAL+      GG++F+WG+   GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                 P+ V    G    +  ISAG  HS  +S SG +++ G    GQLG G   S   
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
           P  +    N+ V  +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R   + 
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
           ++ +G    +I          A +S  G ++++G G +       T D   P  LP  +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            S+     +H    T + E++M+ G +  +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL   L   +    A G 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  V
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342

Query: 409 NL 410
            +
Sbjct: 343 KV 344


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G    R + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386

Query: 274 SLPS 277
           ++P+
Sbjct: 387 TIPT 390



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)

Query: 53  HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
           +D  S + L   S+     +  + CG  H LAL+      GG++F+WG+   GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                 P+ V    G    +  ISAG  HS  +S SG +++ G    GQLG G   S   
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
           P  +    N+ V  +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R   + 
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
           ++ +G    +I          A +S  G ++++G G +       T D   P  LP  +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            S+     +H    T + E++M+ G +  +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL   L   +    A G 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  V
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342

Query: 409 NL 410
            +
Sbjct: 343 KV 344


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G    R + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386

Query: 274 SLPS 277
           ++P+
Sbjct: 387 TIPT 390



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)

Query: 53  HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
           +D  S + L   S+     +  + CG  H LAL+      GG++F+WG+   GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                 P+ V    G    +  ISAG  HS  +S SG +++ G    GQLG G   S   
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
           P  +    N+ V  +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R   + 
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
           ++ +G    +I          A +S  G ++++G G +       T D   P  LP  +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            S+     +H    T + E++M+ G +  +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL   L   +    A G 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  V
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342

Query: 409 NL 410
            +
Sbjct: 343 KV 344


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  T GQLG GR      +PQ++   S   +  ++ G AH +AL+     +   V
Sbjct: 102 ELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGEAHSMALS-----MSRNV 156

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWGR   GQLG G   +   P  +   D     +  ++ G +H+  ++  G +FT G G
Sbjct: 157 YSWGRNDCGQLGLGHTNNKDSPSLIEALDNQE--VEFLACGGSHTALLTKDGLVFTFGAG 214

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++  +P  V+  V K V QIACG RH+L  + D LG +V+ FGSG+ GQL
Sbjct: 215 KCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYVSD-LG-KVFSFGSGEGGQL 272

Query: 214 GVSKDRIRSVSLP 226
           G      + + LP
Sbjct: 273 GNGATHHQLIPLP 285



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 108/242 (44%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           KN+ QI CG  HSL L K   G +++ +G    GQLGV +    S   PQ+   L  + +
Sbjct: 82  KNIIQITCGDYHSLALSK---GGELFAWGQNTYGQLGVGRT-FASTPTPQIVEHLSGVPL 137

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
           V ISA    S ALS   ++Y+WGR      G   T++ + P SL  +L   +    A G 
Sbjct: 138 VQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSP-SLIEALDNQEVEFLACGG 196

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG V   G    G L      S+   L+  L  V+ L G +V QIA G  H+
Sbjct: 197 SHTALLTKDGLVFTFGAGKCGQLG---HNSTQNELTPCL--VTELVGKRVTQIACGRRHT 251

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G GE GQLG G T  Q+ P  +
Sbjct: 252 -------------------------LAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPM 286

Query: 409 NL 410
            L
Sbjct: 287 KL 288



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 124/311 (39%), Gaps = 50/311 (16%)

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
            P+ + L     +  +  G  H+L L+S      GK F +       + H      L  K
Sbjct: 32  KPKCIKLGRKMKIHSMDQGAEHLLVLSS-----DGKPFEYNYS----IEHARFQCVLQEK 82

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSF 175
                      I  I+ G  HS  +S  G LF  G  T+GQLG G  + S  +P  V   
Sbjct: 83  ----------NIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHL 132

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
               + QI+ G  HS+ L    +   VY +G    GQLG+     +    P +   L + 
Sbjct: 133 SGVPLVQISAGEAHSMAL---SMSRNVYSWGRNDCGQLGLGHTNNKDS--PSLIEALDNQ 187

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL---SFSQAAL 286
           E+  ++  G  +A L+ +G ++T+G       G NST +   P  L + L     +Q A 
Sbjct: 188 EVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTP-CLVTELVGKRVTQIAC 246

Query: 287 GWNHVLVLTGD-GEVLML----------GGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
           G  H L    D G+V             G +HH ++  P ++ S   L       S+   
Sbjct: 247 GRRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELKFE----SHTSE 302

Query: 336 VKVIQIAAGAE 346
            ++I IA G +
Sbjct: 303 KELIMIAGGNQ 313



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG     +EL+P L+       V+ +ACG  H LA  S      GKVFS
Sbjct: 208 VFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYVSDL----GKVFS 263

Query: 96  WGRGSSGQLGHGEMVDALYPKPV 118
           +G G  GQLG+G     L P P+
Sbjct: 264 FGSGEGGQLGNGATHHQLIPLPM 286


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 163/332 (49%), Gaps = 26/332 (7%)

Query: 35  KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V S G  + GQLG  G    EL   +  L +L+ V +++CG  H LA+        G+V
Sbjct: 43  RVLSCGDNSRGQLGRRGAPRGELPEPIQALETLN-VDLVSCGKEHSLAVCH-----KGRV 96

Query: 94  FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG GS GQLG GE+ + +  PK +T  +G +  I  +S G  HS  +S    +F+ G 
Sbjct: 97  FAWGAGSEGQLGIGELKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAG 211

Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QL +S   +   S   +++G L ++ +V IS   + +A L+ +G ++T+G       G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 265 STSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSST 320
            T +   PQ +       SQ   G  H L      G+V+    G S  G  + PE ++  
Sbjct: 272 PTPEKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTEN 331

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +S  L    +L GV+V  I AG   + V T
Sbjct: 332 FDIS-CLISAEDLVGVQVKHIFAGTYANFVTT 362



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 58/320 (18%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG         P  + +    NV  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
            HSL +   C   +V+ +G+G  GQLG+ +  ++ +S  P+    L+ I+I+ +S     
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGE--LKEISFTPKKITTLNGIKIIQVSCGHYH 139

Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLT 295
           S ALS +  +++WG+  NS   +   +  PS  S            +Q A G  H   L+
Sbjct: 140 SLALSKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 296 GDGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             G     G +  G L+   R   V S +PLSV       L  + V+ I+ GAEH+AV+T
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGAEHTAVLT 252

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                     ++  + T+G    GQLG   T ++  P++V + D
Sbjct: 253 --------------------------QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIID 286

Query: 413 EFQNRDTQLEVFCGSGFTYA 432
              +     +V CGS  T A
Sbjct: 287 GLVS-----QVDCGSYHTLA 301


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 22/220 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG    GQLG G      +PQL+      ++  + CG  H+ A+T       G+V+
Sbjct: 232 RLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQ-----GEVY 286

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG G  GQLGHG +   L+PK +  F      I  ++ G N +   S  G L+  G G 
Sbjct: 287 SWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGE 346

Query: 155 FGQLGHGDYRSH------------SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           +GQLG  +   H            S P+ V S   K +  +ACG  H++V+  +   N+V
Sbjct: 347 YGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDE---NEV 403

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           Y +G G  G LG+   R + V  PQ+   L   EI  I+A
Sbjct: 404 YQWGWGSSGALGLGNKRFQLV--PQLITSLSGEEIASITA 441



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 19/185 (10%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G++++WG    GQLG G       P+ V T  D     I  +  G  H   ++D G +++
Sbjct: 231 GRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLID---VNIVSVVCGRQHICAITDQGEVYS 287

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G G FGQLGHG+ +S+  P K+  FV  N+ + Q+ACG   ++V     +   +Y FG 
Sbjct: 288 WGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMV---RSVQGLLYAFGH 344

Query: 208 GKRGQLGVS----------KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
           G+ GQLG +          +D     S+P V   L   +I  ++     +  ++ E  +Y
Sbjct: 345 GEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVY 404

Query: 258 TWGRG 262
            WG G
Sbjct: 405 QWGWG 409



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 129/333 (38%), Gaps = 54/333 (16%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           + + G    GQLGH   +    P  +   + K + Q   G  HSL + +   G+ VY +G
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSR--FGD-VYSWG 59

Query: 207 SGKRGQLGVSK-----DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
             K GQLG+ +     D++  V+ P +   L    I+ ++     S AL+  G +Y WG+
Sbjct: 60  RSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQ 119

Query: 262 -----GFNSTSDVNCPQSLPSSLSFS-QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                   S+ D+     L      S Q  +  +    L+G+ +     G       D +
Sbjct: 120 LHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDED 179

Query: 316 RVSSTRPLSVA--LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV-------RLFIISY- 365
           + +S    S +  L K+ +L+    +QI    E    V+G + +        RL+   + 
Sbjct: 180 KEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFN 239

Query: 366 --------------TPFFPPFFINV--------------IAENRAIMTWGWGEHGQLGLG 397
                         TP      I+V              I +   + +WG G  GQLG G
Sbjct: 240 EKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHG 299

Query: 398 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
           N    +HPK +    E   R  Q  V CGS FT
Sbjct: 300 NVKSYLHPKKIQQFVELNERIAQ--VACGSNFT 330



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 35/268 (13%)

Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
           G+++D     P+   D     +  +S GW  S  V+ SG L+T G    GQLG G+   H
Sbjct: 194 GKIIDLNQTIPMQIQDIPE-EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFH 252

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S+P  V + ++ N+  + CG +H   +       +VY +G G  GQLG     ++S   P
Sbjct: 253 STPQLVKTLIDVNIVSVVCGRQHICAITDQ---GEVYSWGLGVFGQLG--HGNVKSYLHP 307

Query: 227 ---QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS----------DV 269
              Q  + L++  I  ++   + +   S +G LY +G G      ST           D 
Sbjct: 308 KKIQQFVELNE-RIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDN 366

Query: 270 NCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           +   S+P       +      A G  H +V+T + EV   G    G L         +  
Sbjct: 367 HFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALG-----LGNKRF 421

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            +  + +++L G ++  I AG +H+ VV
Sbjct: 422 QLVPQLITSLSGEEIASITAGEKHTIVV 449



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 165/447 (36%), Gaps = 95/447 (21%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V S G   +GQLG   + + L P ++       +     G AH LA++       G V+S
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSR-----FGDVYS 57

Query: 96  WGRGSSGQLGHGEMVD-----ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           WGR   GQLG G+            KP          I  ++ G  HS  ++D G ++  
Sbjct: 58  WGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVY-- 115

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSS------------FVNKNVHQIACGMRHSLVL----- 193
               +GQL   D    S  ++ ++             +  +V Q   G + +        
Sbjct: 116 ---EWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTK 172

Query: 194 -LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDI--EIVGISANGDRSAA 249
              D    +       K   LG      + + L Q + + + DI  E+V +S     SAA
Sbjct: 173 PKDDDEDKEASNSAQSKSKHLG------KIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAA 226

Query: 250 LSAEGHLYTWG-----------RGFNSTSDVNCPQSLPSSLSFSQAAL--GWNHVLVLTG 296
           ++  G LYTWG           R F+ST     PQ + + +  +  ++  G  H+  +T 
Sbjct: 227 VTKSGRLYTWGFNEKGQLGLGNRWFHST-----PQLVKTLIDVNIVSVVCGRQHICAITD 281

Query: 297 DGEVL-----MLGGSHHGMLSD---PERVSSTRPLSVALEKV---SNLDGVKVIQ---IA 342
            GEV      + G   HG +     P+++     L+  + +V   SN   V+ +Q    A
Sbjct: 282 QGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYA 341

Query: 343 AG------------AEHSAVVTGKFHWVRLFIISYTPFFPPFFIN---------VIAENR 381
            G             +H        H+     I           N         V+ +  
Sbjct: 342 FGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDEN 401

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +  WGWG  G LGLGN   Q+ P+++
Sbjct: 402 EVYQWGWGSSGALGLGNKRFQLVPQLI 428


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  108 bits (270), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 90/288 (31%), Positives = 141/288 (48%), Gaps = 39/288 (13%)

Query: 35   KVWSWGAGTDGQLGTGRLHDEL--SPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGG 91
            ++++WG    GQLG G    ++  +P+ L      S + M+ CGG H + + S   V   
Sbjct: 1238 ELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGGEHSICVDSDYVV--- 1294

Query: 92   KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
              +SWG+   GQLGHG + V    PK +    G +  I  I+AG+ H+  +  SG L++ 
Sbjct: 1295 --YSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQK--IQAIAAGFAHTIVLKKSGELYSF 1350

Query: 151  GDGTFGQLGHGDYRSHSSPVKV--SSFV-----NKNVHQIACGMRHSLVLLKDCLGN-QV 202
            G G  GQLGHG + S S P ++  ++ V        + QIACG  HS++    C  N +V
Sbjct: 1351 GYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVI----CSDNGEV 1406

Query: 203  YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            Y +G GK+GQLG       S++ P++   L    +  IS     + A +   ++Y+WG G
Sbjct: 1407 YSWGLGKQGQLG--HGNYESIARPRLIEALKG--VTKISCGHFYTMATTDLKNVYSWGLG 1462

Query: 263  ----FNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEV 300
                    SD N  ++ P  + F      S+   G NH + LT  G++
Sbjct: 1463 EHMKLGHGSDKN--EATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDL 1508



 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 111/404 (27%), Positives = 176/404 (43%), Gaps = 63/404 (15%)

Query: 36   VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+SWG    GQLG G +   +  P+++   S   +  +A G AH + L        G+++
Sbjct: 1294 VYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKK-----SGELY 1348

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTF--FDGHRY---TITHISAGWNHSGFVSDSGCLFT 149
            S+G G  GQLGHG  V    P  +      G ++    IT I+ G+ HS   SD+G +++
Sbjct: 1349 SFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYS 1408

Query: 150  CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
             G G  GQLGHG+Y S + P  + +   K V +I+CG  H   +    L N VY +G G+
Sbjct: 1409 WGLGKQGQLGHGNYESIARPRLIEAL--KGVTKISCG--HFYTMATTDLKN-VYSWGLGE 1463

Query: 210  RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
              +LG   D+  + + P+V        +  I    + +  L+  G L       ++  DV
Sbjct: 1464 HMKLGHGSDK--NEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNN--NSLSNDDDV 1519

Query: 270  N-----CPQSLPSSLSFSQAAL---GWNHVLVLTGDGEV---LMLGGSHHGMLS---DPE 315
            N      P +  SS S S       G +  L L  + +V      G   HG L    D +
Sbjct: 1520 NDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLK 1579

Query: 316  RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
                 +P+  A++ V+ L+   +I I+ G + +A++T                       
Sbjct: 1580 SPFFDKPIPTAIKGVNALN---LIDISCGTDFTAMIT----------------------- 1613

Query: 376  VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                N A+  WG+G  GQ+G G T D   P  + L D   N+ +
Sbjct: 1614 ---SNGALYVWGYGNFGQIGNGKTDDAWVPIRIPLTDSKANQSS 1654



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 99/200 (49%), Gaps = 19/200 (9%)

Query: 72   LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTIT 129
            ++CG  HV AL S S    G++F+WG+  SGQLGHG  +  +   PK + FF G +  I 
Sbjct: 1223 VSCGWDHV-ALISES----GELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRG-KSPII 1276

Query: 130  HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMR 188
             +  G  HS  V     +++ G   FGQLGHG    S + P  +     + +  IA G  
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336

Query: 189  HSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHD--IEIVGISA 242
            H++VL K     ++Y FG G +GQLG    VSK     + L  + +G+     +I  I+ 
Sbjct: 1337 HTIVLKKS---GELYSFGYGDQGQLGHGSFVSKSIPTRIELNTI-VGIQHGGGKITQIAC 1392

Query: 243  NGDRSAALSAEGHLYTWGRG 262
                S   S  G +Y+WG G
Sbjct: 1393 GFGHSVICSDNGEVYSWGLG 1412



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 63/324 (19%)

Query: 131  ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DY-RSHSSPVKVSSFVNKN-VHQIACGM 187
            +S GW+H   +S+SG LFT G    GQLGHG D  +  ++P ++  F  K+ +  + CG 
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGG 1282

Query: 188  RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
             HS+ +  D +   VY +G  K GQLG     + S + P++   +   +I  I+A    +
Sbjct: 1283 EHSICVDSDYV---VYSWGQDKFGQLGHGTKSV-SQNRPKIIEDISGQKIQAIAAGFAHT 1338

Query: 248  AALSAEGHLYTWGRG----FNSTSDVNCPQSLPSSLSF-------------SQAALGWNH 290
              L   G LY++G G        S V+  +S+P+ +               +Q A G+ H
Sbjct: 1339 IVLKKSGELYSFGYGDQGQLGHGSFVS--KSIPTRIELNTIVGIQHGGGKITQIACGFGH 1396

Query: 291  VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
             ++ + +GEV   G    G L      S  RP       +  L GV   +I+ G      
Sbjct: 1397 SVICSDNGEVYSWGLGKQGQLGHGNYESIARP-----RLIEALKGVT--KISCGH----- 1444

Query: 351  VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                                 F+     + + + +WG GEH +LG G+  ++  P+VV  
Sbjct: 1445 ---------------------FYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVV-- 1481

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
             D F  ++   ++ CG   T  ++
Sbjct: 1482 -DFFIQKNVS-KIVCGLNHTITLT 1503



 Score = 43.1 bits (100), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 29   EEQQVVKVWSWGAGTDGQLGTG-----RLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
            E  QV  +++ GAG  G+LG G        D+  P  +   +  ++  ++CG      +T
Sbjct: 1554 ENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMIT 1613

Query: 84   SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
            S      G ++ WG G+ GQ+G+G+  DA  P  +   D
Sbjct: 1614 S-----NGALYVWGYGNFGQIGNGKTDDAWVPIRIPLTD 1647



 Score = 42.7 bits (99), Expect = 0.32,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 43/185 (23%)

Query: 238  VGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCPQSLPSSLSFSQAA-------L 286
            + +S   D  A +S  G L+TWG+          D+   Q+ P  L F +          
Sbjct: 1221 IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280

Query: 287  GWNHVLVLTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
            G  H + +  D  V   G    G L    + VS  RP     + + ++ G K+  IAAG 
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRP-----KIIEDISGQKIQAIAAGF 1335

Query: 346  EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
             H+                           V+ ++  + ++G+G+ GQLG G+   +  P
Sbjct: 1336 AHTI--------------------------VLKKSGELYSFGYGDQGQLGHGSFVSKSIP 1369

Query: 406  KVVNL 410
              + L
Sbjct: 1370 TRIEL 1374


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 16/218 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG+   GQLG G  ++++S P L+   +   ++ +ACGG H  A++       G +
Sbjct: 473 ELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK-----SGAI 527

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           F WG+ + GQLG  ++    +P  +      G RY    +S G + S F++  G +FTCG
Sbjct: 528 FGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRY----VSCGDDFSVFLTAGGGVFTCG 583

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            GTFGQLGHG   +   P  V   +   + QIACG RH+L  +      ++YGFG    G
Sbjct: 584 AGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPS--RGKIYGFGLSGVG 641

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           QLG+    + + + PQ+  G    +I+  S       A
Sbjct: 642 QLGIGI--VGNYNTPQIVRGPWQSQILTFSVQMSEELA 677



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 129/303 (42%), Gaps = 26/303 (8%)

Query: 56  LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALY 114
           + P+ ++      ++  ACG +H L LT+      GK++S G    GQLGH  E +    
Sbjct: 336 MVPRKMDWMHAKEIARAACGASHTLLLTN-----DGKMYSCGNNDHGQLGHDVESLPNKR 390

Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVS 173
           P+ +T  +   Y IT    G  HS  +++ G +++ G    GQLG   D      P  + 
Sbjct: 391 PQLLTALEN--YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIR 448

Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
           S   K V QIA G  H L L       ++Y +GS   GQLG+       VS P +   L 
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTN---SGELYAWGSNAYGQLGLGMTN-EKVSTPTLVQSLA 504

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAA 285
            + I  I+  G+ S A+S  G ++ WG+      G N  +    P  L +  SL     +
Sbjct: 505 GVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVS 564

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
            G +  + LT  G V   G    G L      +   P       V  L G K+ QIA G 
Sbjct: 565 CGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILP-----RMVFELMGSKITQIACGR 619

Query: 346 EHS 348
            H+
Sbjct: 620 RHT 622



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 32/293 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-----PQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           K++S G    GQLG    HD  S     PQLL       ++   CG AH LALT+     
Sbjct: 367 KMYSCGNNDHGQLG----HDVESLPNKRPQLLTALENYIITQACCGTAHSLALTN----- 417

Query: 90  GGKVFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
            G+V+SWG  + GQLG   +    + P+ +      +  +  I+AG  H   +++SG L+
Sbjct: 418 WGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQ--VVQIAAGHYHCLALTNSGELY 475

Query: 149 TCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
             G   +GQLG G      S+P  V S     +  IACG  HS  + K      ++G+G 
Sbjct: 476 AWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK---SGAIFGWGK 532

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNST 266
              GQLG++   + S   P     L  + +  +S   D S  L+A G ++T G G F   
Sbjct: 533 NTFGQLGLND--LNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQL 590

Query: 267 SDVNCPQSLPSSLSF-------SQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
              +C   +   + F       +Q A G  H L      G++   G S  G L
Sbjct: 591 GHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQL 643



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 104/269 (38%), Gaps = 60/269 (22%)

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
           P K+     K + + ACG  H+L+L  D    ++Y  G+   GQLG   + + +   PQ+
Sbjct: 338 PRKMDWMHAKEIARAACGASHTLLLTND---GKMYSCGNNDHGQLGHDVESLPN-KRPQL 393

Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPS--SL 279
              L +  I         S AL+  G +Y+WG            T+    P+ + S  + 
Sbjct: 394 LTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERVSSTRPLSVALEKVSNLDGV 336
              Q A G  H L LT  GE+   G + +G L      E+VS+          V +L GV
Sbjct: 454 QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTP-------TLVQSLAGV 506

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
            +  IA G  HS  V+                          ++ AI  WG    GQLGL
Sbjct: 507 PIAFIACGGNHSFAVS--------------------------KSGAIFGWGKNTFGQLGL 540

Query: 397 GNTCDQIHP-----------KVVNLGDEF 414
            +   +  P           + V+ GD+F
Sbjct: 541 NDLNSRQFPTQLRTLRSLGVRYVSCGDDF 569


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 163/332 (49%), Gaps = 26/332 (7%)

Query: 35  KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V S G  + GQLG  G    EL   +  L +L+ V +++CG  H LA+        G+V
Sbjct: 43  RVLSCGDNSRGQLGRRGAPRGELPEPIQALETLN-VDLVSCGKEHSLAVCH-----KGRV 96

Query: 94  FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG GS GQLG GE+ + +  PK +T  +G +  I  +S G  HS  +S    +F+ G 
Sbjct: 97  FAWGAGSEGQLGIGELKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAG 211

Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QL +S   +   S   +++G L ++ +V IS   + +A L+ +G ++T+G       G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 265 STSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSST 320
            T +   PQ +       SQ   G  H L      G+V+    G S  G  + PE ++  
Sbjct: 272 PTPEKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTEN 331

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +S  L    +L GV+V  I AG   + V T
Sbjct: 332 FDIS-CLISAEDLVGVQVKHIFAGTYANFVTT 362



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 58/320 (18%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG         P  + +    NV  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
            HSL +   C   +V+ +G+G  GQLG+ +  ++ +S  P+    L+ I+I+ +S     
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGE--LKEISFTPKKITTLNGIKIIQVSCGHYH 139

Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLT 295
           S ALS +  +++WG+  NS   +   +  PS  S            +Q A G  H   L+
Sbjct: 140 SLALSKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 296 GDGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             G     G +  G L+   R   V S +PLSV       L  + V+ I+ GAEH+AV+T
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGAEHTAVLT 252

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                     ++  + T+G    GQLG   T ++  P++V + D
Sbjct: 253 --------------------------QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIID 286

Query: 413 EFQNRDTQLEVFCGSGFTYA 432
              +     +V CGS  T A
Sbjct: 287 GLVS-----QVDCGSYHTLA 301


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 159/384 (41%), Gaps = 59/384 (15%)

Query: 39  WGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WG   DGQLG G   + +  P++ ++ S   +  +ACGG H L L        G V++ G
Sbjct: 4   WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQ-----DGSVYTCG 58

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             S GQLGH +  ++  P+ V   D  +  IT +S G  HS  V++ G +F  G G  GQ
Sbjct: 59  SNSCGQLGHDKAGNS--PELVGALDTQK--ITMVSCGRAHSVAVNEQGQVFVWGAGDGGQ 114

Query: 158 LGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           LG     +  + V++   + K    ++ Q+ CG +H + L +D    Q++ +G    GQL
Sbjct: 115 LG---LETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRD---GQLFTWGQNSSGQL 168

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+ K     +S P     L  I +  I+A GD   ALS  G ++ WG+      G N   
Sbjct: 169 GLGKGETSKLS-PSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQ 227

Query: 268 D--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D  V C      S      + G  H   LT  G +   G    G L      +   P   
Sbjct: 228 DRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLP--- 284

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
              +V  L G +V QI  G  H+              +++ P            +  +  
Sbjct: 285 --RRVMELMGTEVSQITCGRHHT--------------LAFVP-----------SSGTVYA 317

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVN 409
           +G   HGQLG G   D   P  V 
Sbjct: 318 FGCNSHGQLGTGILADLRSPHPVK 341



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  + GQLG G+    +LSP  +   +   ++ +  GG H  AL+     + G V
Sbjct: 156 QLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALS-----LSGAV 210

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+  +GQLG  +  D   P  + F    R  + +IS G  H+  ++ SG LFT GDG
Sbjct: 211 FGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQR--VVYISCGDEHTAALTKSGGLFTFGDG 268

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGHG   +   P +V   +   V QI CG  H+L  +       VY FG    GQL
Sbjct: 269 SRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPS--SGTVYAFGCNSHGQL 326

Query: 214 G 214
           G
Sbjct: 327 G 327



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 113/231 (48%), Gaps = 19/231 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+ WGAG  GQLG       +  P+LL      S+S + CG  H +AL+       G++
Sbjct: 103 QVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSR-----DGQL 157

Query: 94  FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG+ SSGQLG G+     L P PV    G    +  I+AG +H   +S SG +F  G 
Sbjct: 158 FTWGQNSSGQLGLGKGETSKLSPSPVKSLAG--IPLAQITAGGDHCFALSLSGAVFGWGK 215

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG  D +  + P  +    ++ V  I+CG  H+  L K      ++ FG G RGQ
Sbjct: 216 NKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTK---SGGLFTFGDGSRGQ 272

Query: 213 L--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWG 260
           L  G S + +    LP+  + L   E+  I+     + A + + G +Y +G
Sbjct: 273 LGHGSSNNEL----LPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFG 319



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 149/342 (43%), Gaps = 41/342 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V++ G+ + GQLG    HD+   SP+L+       ++M++CG AH +A+        G+V
Sbjct: 54  VYTCGSNSCGQLG----HDKAGNSPELVGALDTQKITMVSCGRAHSVAVNE-----QGQV 104

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG G  GQLG  E  +     P        ++I+ +  G  H   +S  G LFT G  
Sbjct: 105 FVWGAGDGGQLGL-ETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQN 163

Query: 154 TFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G    S  SP  V S     + QI  G  H   L    L   V+G+G  K GQ
Sbjct: 164 SSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFAL---SLSGAVFGWGKNKAGQ 220

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
           LG++  + R+V  P     L    +V IS   + +AAL+  G L+T+G G        S+
Sbjct: 221 LGLNDKQDRAV--PCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSS 278

Query: 267 SDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGM--------LSDPE 315
           ++   P+ +   +    SQ   G +H L      G V   G + HG         L  P 
Sbjct: 279 NNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPH 338

Query: 316 RVSST------RPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            V +       R   V L   +      VI+I  G +HS ++
Sbjct: 339 PVKNDFLTLNLRKGKVYLRIDTGFLKYTVIKIICGGDHSFLM 380



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 49/326 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG    GQLG G   + ++ P+    F G    +  ++ G  H+ F+   G ++TCG
Sbjct: 1   MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGR--GLKEVACGGQHTLFLLQDGSVYTCG 58

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             + GQLGH   ++ +SP  V +   + +  ++CG  HS+ + +     QV+ +G+G  G
Sbjct: 59  SNSCGQLGHD--KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQ---GQVFVWGAGDGG 113

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GF 263
           QLG+      +V +P++   L D  I  +        ALS +G L+TWG+        G 
Sbjct: 114 QLGLETAET-AVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK 172

Query: 264 NSTSDVN-CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             TS ++  P    + +  +Q   G +H   L+  G V   G +  G L   ++     P
Sbjct: 173 GETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP 232

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             +       L   +V+ I+ G EH+A +T                          ++  
Sbjct: 233 CHIKF-----LRSQRVVYISCGDEHTAALT--------------------------KSGG 261

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           + T+G G  GQLG G++ +++ P+ V
Sbjct: 262 LFTFGDGSRGQLGHGSSNNELLPRRV 287


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 155/384 (40%), Gaps = 54/384 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG+   G+LG G + DE    P+ ++    S+V  +ACG  + +A+T       GKV
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKE-----GKV 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +S G    GQLGH +    L   P        +    I+ G  H+  V++ G LF+ G  
Sbjct: 56  YSCGNNDYGQLGHEKARKRLQLIP----GLDAFVFRKIACGNCHTLAVNEWGQLFSWGCN 111

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQLG           ++   +  NV  QIACG  HS+ L  D    ++Y +GS + GQ
Sbjct: 112 MNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTND---GELYAWGSNREGQ 168

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+       +  P+    L  + I  I+  G  +  +S  G +++WGR      G N  
Sbjct: 169 LGLGSYTTTEIK-PKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDV 227

Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
              N P  L +  +     A  G    + LT DG V   G   +G L      +   P  
Sbjct: 228 QQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILP-- 285

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +V  L G  V QI+ G  H+                         + ++     + 
Sbjct: 286 ---RQVMELMGSTVTQISCGKRHT-------------------------LALVPSRGRVY 317

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVV 408
            WG G  GQLG   +     P+VV
Sbjct: 318 AWGLGGAGQLGNRASQSATTPQVV 341



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 12/197 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG+  +GQLG G     E+ P+ ++  +   ++ +ACGG H + ++       G V
Sbjct: 157 ELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISK-----SGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           FSWGR + GQLG  ++     P  +      +  + + + G   S F++  G +FTCG G
Sbjct: 212 FSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAK--VCYATCGEEFSVFLTMDGGVFTCGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG+  +   P +V   +   V QI+CG RH+L L+      +VY +G G  GQL
Sbjct: 270 MYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 327

Query: 214 GVSKDRIRSVSLPQVTI 230
           G      +S + PQV +
Sbjct: 328 GNRAS--QSATTPQVVL 342



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 15/231 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG   +GQLG   +   E  P+++ +   + +  +ACG  H +ALT+      G++
Sbjct: 104 QLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTN-----DGEL 158

Query: 94  FSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++WG    GQLG G      + PK ++        I  I+ G  H+  +S SG +F+ G 
Sbjct: 159 YAWGSNREGQLGLGSYTTTEIKPKRISTLAA--VPIAFIACGGYHTIVISKSGAVFSWGR 216

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            TFGQLG  D +  + P ++ +  N  V    CG   S+ L  D     V+  G+G  GQ
Sbjct: 217 NTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMD---GGVFTCGAGMYGQ 273

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRG 262
           LG       +  LP+  + L    +  IS     + AL  + G +Y WG G
Sbjct: 274 LG--HGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLG 322


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 189/458 (41%), Gaps = 81/458 (17%)

Query: 6   MEETEKGKSALINNAKPKIEEEEEEQQVVKVWS--WGAGTDGQLGTGRLHDELSPQLLNL 63
           M    K + A    AK K+E      +  K W   WG G  G+LG      +  P L   
Sbjct: 1   MRSVIKRRRAYGLTAKNKVEVS---GKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRA 57

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
                   ++CGGAH L LT       G+VF+ G  SSGQLG     ++ +  PV    G
Sbjct: 58  LESHEPCSVSCGGAHTLILTDK-----GRVFATGLNSSGQLGVPLKSESSF-DPVEVH-G 110

Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNV 180
                 HI+AG  HS  ++ SG  +  G  + GQLG G  R+ S   +P K+ S     +
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGK-RAKSVYITPQKMESLAGMRL 169

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-----DRIRSVS--LPQVTIGLH 233
             +A G  HSL L +     QV  +G+ + G LG  +     D  +  +   P++   L 
Sbjct: 170 KALALGTDHSLGLAET---GQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLE 226

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
            +++  +SA    SA     G +Y++G+      G  + +D + P  +P     S  + G
Sbjct: 227 KLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCG 286

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H   +T DG++   G + HG L    R SS +PL     ++ +L    + +I+ G +H
Sbjct: 287 GYHTGAITQDGDIYTWGSNEHGCLGSGFRASS-KPL-----RLESLAEAFMSEISCGWKH 340

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG------------EHGQLG 395
           +A ++  +                           I +WGWG              GQLG
Sbjct: 341 TAAISDGY---------------------------IFSWGWGGSYGTYATQAESSGGQLG 373

Query: 396 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           +G   D   P  +    E  +R + L V CG   T AI
Sbjct: 374 VGTDFDFFEPVPI----EMDDRLSALHVSCGFNHTAAI 407



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 23/173 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++S+G G+  QLG G  +D   P    +  L  VS ++CGG H  A+T       G +++
Sbjct: 249 IYSFGQGSMCQLGLGNNNDASQP--CPIPDLPRVSSISCGGYHTGAITQD-----GDIYT 301

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---- 151
           WG    G LG G    +   KP+         ++ IS GW H+  +SD G +F+ G    
Sbjct: 302 WGSNEHGCLGSGFRASS---KPLRLESLAEAFMSEISCGWKHTAAISD-GYIFSWGWGGS 357

Query: 152 DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
            GT+        GQLG G       PV +      +   ++CG  H+  +L++
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILEE 410


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 148/329 (44%), Gaps = 21/329 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWS G  + GQLG  R      P  +       +  ++CG  H LA+        G+VFS
Sbjct: 58  VWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKE-----GRVFS 112

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG GS GQLG  E    L   P    +   + I  +S G  HS  ++  G +F+ G    
Sbjct: 113 WGSGSDGQLGIREF-KKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNH 171

Query: 156 GQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G+   S +SP  V S     + Q+A G  HS  L         YG+G    GQL 
Sbjct: 172 GQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFAL---SFSGTSYGWGRNNAGQLA 228

Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           +S  K+    +S P     L  +++  IS   + +A L+ +G ++T+G       G    
Sbjct: 229 LSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLI 288

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLT-GDGEVLMLG-GSHHGMLSDPERVSSTRPLS 324
           S +  PQ + S++SFSQ A G  H L  +   G+V+  G GS    +   +   + +  +
Sbjct: 289 SGMKGPQVVDSAVSFSQIACGSYHTLAYSCTTGQVISFGCGSQRDPIGPLQPGDAVQNFN 348

Query: 325 VA-LEKVSNLDGVKVIQIAAGAEHSAVVT 352
           ++ L   ++    +V  I AGA  + V T
Sbjct: 349 ISNLISSNDFTDFQVKDIFAGANANFVTT 377



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 156/355 (43%), Gaps = 54/355 (15%)

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGH---RYTITHISAGWNHSGFVSDSGCLFTC 150
           + WG  SSGQLG   +  A   + V    G      T+   + G  HS  +   G +++C
Sbjct: 3   YCWGDNSSGQLGIPAVPRA-KARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSC 61

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+ + GQLG    + H  P ++ +   +++  ++CG  HSL + K+    +V+ +GSG  
Sbjct: 62  GNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKE---GRVFSWGSGSD 118

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
           GQLG+ + +  S S+P+    L   +I+ +S     S AL+ +G +++WG+  N+   + 
Sbjct: 119 GQLGIREFKKLS-SIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGK--NNHGQLG 175

Query: 271 CPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
             +++PS  S            +Q A G  H   L+  G     G ++ G L+   +  S
Sbjct: 176 LGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKES 235

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              +S     +  L  ++V  I+ G EH+AV+T                          +
Sbjct: 236 AEQISKPFS-IGELKRLQVTYISCGDEHTAVLT--------------------------Q 268

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           +  + T+G  + GQLG         P+VV+    F       ++ CGS  T A S
Sbjct: 269 DGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAVSFS------QIACGSYHTLAYS 317



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 100/202 (49%), Gaps = 20/202 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
           +V+SWG+G+DGQLG  R   +LS     +  LSS  ++  +CG  H +AL        G+
Sbjct: 109 RVFSWGSGSDGQLGI-REFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQ-----DGR 162

Query: 93  VFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG+ + GQLG GE V +   P+ V   DG    +  ++AG  HS  +S SG  +  G
Sbjct: 163 VFSWGKNNHGQLGLGENVPSQASPQWVKSLDG--IPLAQVAAGGAHSFALSFSGTSYGWG 220

Query: 152 DGTFGQLGHGDYRSH----SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
               GQL     +      S P  +       V  I+CG  H+ VL +D    +V+ FGS
Sbjct: 221 RNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQD---GKVFTFGS 277

Query: 208 GKRGQLGVSKDRIRSVSLPQVT 229
              GQLG  +  I  +  PQV 
Sbjct: 278 NDSGQLG--RQLISGMKGPQVV 297


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 154/340 (45%), Gaps = 48/340 (14%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGA--HVLALTSPSSVIGGK 92
            V + G G+ G+LG G   D  S  +++ L       ++   G+  H LALT       G+
Sbjct: 1042 VLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTE-----SGE 1096

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            VFSWG G  G+LGHG       P+ +    G    +  I+ G+ HS  V+  G L T G+
Sbjct: 1097 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VIQIACGFKHSAVVTVDGKLLTFGN 1154

Query: 153  GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            G +G+LG G   +  +P +V +  N ++  +ACG+ H++ +  D  G+  + FG G  G+
Sbjct: 1155 GDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCVSAD--GSTTWAFGDGDYGK 1212

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTS 267
            LG+     +S   P     L  +++  ++     S AL+ +G + TWG+        +  
Sbjct: 1213 LGLGNTSAKST--PVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQM 1270

Query: 268  DVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVL--------MLGGSHHGMLSDPER 316
              +C     ++L+     +  +G  H L LT DG V          LG  H G + +P+ 
Sbjct: 1271 RGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQL 1330

Query: 317  ---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
               + S+ P+                QI+AG  HSA  +G
Sbjct: 1331 LGGLGSSEPIK---------------QISAGRTHSAAWSG 1355



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 166/386 (43%), Gaps = 62/386 (16%)

Query: 37   WSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            + WG G  GQL   GR    L+P  L+ SS SS   + CG      + +      G V +
Sbjct: 994  YLWGGGRHGQLCEAGR--SVLTP--LHTSSFSSAQQIICGQNCTFVIQA-----NGTVLA 1044

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGT 154
             G GS G+LG G   D      V+   G   T    S G + HS  +++SG +F+ GDG 
Sbjct: 1045 CGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGD 1104

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LGHG+      P ++ +   + V QIACG +HS V+  D    ++  FG+G  G+LG
Sbjct: 1105 YGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVD---GKLLTFGNGDYGRLG 1161

Query: 215  VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNST 266
            +    + +   P+    L +  I  ++   + +  +SA+G   TW          G  +T
Sbjct: 1162 LGT--VCNRKTPERVKALENYHIGHVACGLNHTVCVSADGS-TTWAFGDGDYGKLGLGNT 1218

Query: 267  SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            S  + P  +   S L   + A G    + LT DG VL  G       ++ +      P  
Sbjct: 1219 SAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGHCTP-- 1276

Query: 325  VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +KV+ L G  + ++  G+EH+  +T   +                            
Sbjct: 1277 ---QKVTTLAGHFIEEVVVGSEHTLALTSDGN---------------------------- 1305

Query: 385  TWGWG--EHGQLGLGNTCDQIHPKVV 408
             WGWG    GQLGLG+T     P+++
Sbjct: 1306 VWGWGLNADGQLGLGHTGTVREPQLL 1331



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 26/268 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G  G+LG G    +  P+ +       V  +ACG  H   +T     + GK+ 
Sbjct: 1096 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVT-----VDGKLL 1150

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
            ++G G  G+LG G + +   P+ V   +   Y I H++ G NH+  VS D    +  GDG
Sbjct: 1151 TFGNGDYGRLGLGTVCNRKTPERVKALEN--YHIGHVACGLNHTVCVSADGSTTWAFGDG 1208

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             +G+LG G+  + S+PVK+ +     V ++ACG + S+ L +D      +    G+   +
Sbjct: 1209 DYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRD-----GFVLTWGQDRLI 1263

Query: 214  GVSKDRIRSVSLPQ--VTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNS 265
            G ++ ++R    PQ   T+  H IE V + +  + + AL+++G+++ WG       G   
Sbjct: 1264 GQTEAQMRGHCTPQKVTTLAGHFIEEVVVGS--EHTLALTSDGNVWGWGLNADGQLGLGH 1321

Query: 266  TSDVNCPQ---SLPSSLSFSQAALGWNH 290
            T  V  PQ    L SS    Q + G  H
Sbjct: 1322 TGTVREPQLLGGLGSSEPIKQISAGRTH 1349



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 55/297 (18%)

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G G  GQL     RS  +P+  SSF   +  QI CG   + V+  +     V   G G  
Sbjct: 997  GGGRHGQLCEAG-RSVLTPLHTSSF--SSAQQIICGQNCTFVIQAN---GTVLACGEGSY 1050

Query: 211  GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----N 264
            G+LG  + D + S+++     G    ++V    +   S AL+  G +++WG G      +
Sbjct: 1051 GRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGH 1110

Query: 265  STSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              SD    Q  P  +         Q A G+ H  V+T DG++L  G   +G L      +
Sbjct: 1111 GNSD---RQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCN 1167

Query: 319  STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
               P     E+V  L+   +  +A G  H+  V+                         A
Sbjct: 1168 RKTP-----ERVKALENYHIGHVACGLNHTVCVS-------------------------A 1197

Query: 379  ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            +      +G G++G+LGLGNT  +  P  +      + +    +V CG+ F+ A++R
Sbjct: 1198 DGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVK----KVACGTQFSVALTR 1250


>gi|115496664|ref|NP_001069489.1| secretion-regulating guanine nucleotide exchange factor [Bos
           taurus]
 gi|117940126|sp|Q3MHW0.1|SRGEF_BOVIN RecName: Full=Secretion-regulating guanine nucleotide exchange
           factor
 gi|75773727|gb|AAI04611.1| Secretion regulating guanine nucleotide exchange factor [Bos
           taurus]
 gi|296480129|tpg|DAA22244.1| TPA: secretion-regulating guanine nucleotide exchange factor [Bos
           taurus]
          Length = 464

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 182/447 (40%), Gaps = 79/447 (17%)

Query: 21  KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHV 79
           +P+    E       +++WGA + GQLG G   D LS Q L +      +  +  GG H 
Sbjct: 2   EPEPHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHS 61

Query: 80  LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
             +T       G +F  G    GQLG G   + LY  P     G    I  ++ GW+ + 
Sbjct: 62  AVVTDE-----GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLG--CAIQQVACGWDFTI 114

Query: 140 FVSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
            ++++G + +CG  +FGQLG  HG  R      +    + + V  IA G+RH+L      
Sbjct: 115 ILTENGQVLSCGSNSFGQLGVPHGPRRCVIP--QAIELLREKVVSIAAGLRHALAATAS- 171

Query: 198 LGNQVYGFG-----SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
               V+ +G     SG+R   G +     +   P    GL + + V + A  D SA+L+ 
Sbjct: 172 --GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTD 229

Query: 253 EGHLYTWGRG-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHVLVLTGDGEVLML 303
            G LY WG        +  + +  PQ + +    ++  AA+  GW H++  T  G+V   
Sbjct: 230 AGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDG--------------VKVIQIAAGAEHS- 348
           G + +G L    R   TR    + ++  +L G                  +I+ G+EH+ 
Sbjct: 290 GRADYGQLG---RTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNL 346

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           AV+ G  H                            +WGW EHG  G G   D   PK V
Sbjct: 347 AVIGGVCH----------------------------SWGWNEHGMCGDGTEADVWAPKPV 378

Query: 409 NLGDEFQNRDTQLEVFCGSGFTYAISR 435
                F      L V CG+G + A+ +
Sbjct: 379 PGLRFFLG----LHVGCGAGHSLALCQ 401


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WGA   GQLG         P  L+L ++  VS  +CGG H L L+       GKVFS
Sbjct: 14  VYTWGANFFGQLGRDYSRLWSLPSELHLPNVFVVSA-SCGGMHTLLLSKE-----GKVFS 67

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G++G+LGHG   +   P+P+   +  R  IT I+AGW HS  + D G LFT G G  
Sbjct: 68  FGDGANGRLGHGNCRNYSLPQPIASLESKR--ITFIAAGWTHSMAIDDDGKLFTWGCGNA 125

Query: 156 GQLGHGDYRSHSSPVKVSSF--VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           G+LGHG+      P  V     +       +    HS V    C    V+ +G G+ GQL
Sbjct: 126 GRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVC---CENGTVWTWGLGEHGQL 182

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           GV         +   ++   ++ IV +S  G  +AA++ +G L TWGRG
Sbjct: 183 GVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRG 231



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 10/182 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV+S+G G +G+LG G   +   PQ +       ++ +A G  H +A+        GK+F
Sbjct: 64  KVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDD-----GKLF 118

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G++G+LGHG ++D   P+ V      R      S  ++HS    ++G ++T G G 
Sbjct: 119 TWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGE 178

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            GQLG G   SH  PV V S  + N+H  +++CG  H+  +  D     +  +G G  GQ
Sbjct: 179 HGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTND---GTLLTWGRGDWGQ 235

Query: 213 LG 214
           LG
Sbjct: 236 LG 237



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 114/272 (41%), Gaps = 45/272 (16%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           H+  VS  G ++T G   FGQLG    R  S P ++    N  V   +CG  H+L+L K+
Sbjct: 4   HAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLLSKE 62

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
               +V+ FG G  G+LG      R+ SLPQ    L    I  I+A    S A+  +G L
Sbjct: 63  ---GKVFSFGDGANGRLG--HGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKL 117

Query: 257 YTWG------RGFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGS 306
           +TWG       G  +  DV  P+ +         A+     ++H  V   +G V   G  
Sbjct: 118 FTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLG 177

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
            HG L      S   P+ V     +NL    +++++ G  H+A VT              
Sbjct: 178 EHGQLGVGSTESHLEPVLVKSMADANL---HIVEVSCGGAHTAAVT-------------- 220

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
                        +  ++TWG G+ GQLG GN
Sbjct: 221 ------------NDGTLLTWGRGDWGQLGHGN 240



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 20/233 (8%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++WG    GQLG       L+  P      + + ++  S G  H+  +S  G +F+ 
Sbjct: 12  GDVYTWGANFFGQLG--RDYSRLWSLPSELHLPNVFVVS-ASCGGMHTLLLSKEGKVFSF 68

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           GDG  G+LGHG+ R++S P  ++S  +K +  IA G  HS+ +  D    +++ +G G  
Sbjct: 69  GDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDD---GKLFTWGCGNA 125

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG--DRSAALSAEGHLYTWGRGFNSTSD 268
           G+LG     +  V  P+    L+ I +  + A+G  D SA     G ++TWG G +    
Sbjct: 126 GRLG--HGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLG 183

Query: 269 VNCPQS----------LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           V   +S            ++L   + + G  H   +T DG +L  G    G L
Sbjct: 184 VGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQL 236



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 48/245 (19%)

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            VY +G+   GQLG  +D  R  SLP   + L ++ +V  S  G  +  LS EG ++++G
Sbjct: 13  DVYTWGANFFGQLG--RDYSRLWSLPS-ELHLPNVFVVSASCGGMHTLLLSKEGKVFSFG 69

Query: 261 RGFN------STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G N      +  + + PQ + S  S   +  A GW H + +  DG++   G  + G L 
Sbjct: 70  DGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLG 129

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
               +   RP  V  +++  +  +K +  +   +HSAV                      
Sbjct: 130 HGNVLDVWRPRFV--DRLYRIR-MKAMMASGSYDHSAVC--------------------- 165

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL---EVFCGSGF 429
                 EN  + TWG GEHGQLG+G+T   + P +V         D  L   EV CG   
Sbjct: 166 -----CENGTVWTWGLGEHGQLGVGSTESHLEPVLVK-----SMADANLHIVEVSCGGAH 215

Query: 430 TYAIS 434
           T A++
Sbjct: 216 TAAVT 220



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           K+++WG G  G+LG G + D   P+ ++ L  +   +M+A G     A+   +    G V
Sbjct: 116 KLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCEN----GTV 171

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG G  GQLG G     L P  V         I  +S G  H+  V++ G L T G G
Sbjct: 172 WTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRG 231

Query: 154 TFGQLGHGD 162
            +GQLGHG+
Sbjct: 232 DWGQLGHGN 240


>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 818

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 187/424 (44%), Gaps = 66/424 (15%)

Query: 20  AKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG 75
           A P +   ++    VK    +W+WG    G+LG G   D   P+   + + S  + ++ G
Sbjct: 124 AFPVLAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPE--QVGTDSDWTAVSAG 181

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
             H +A+ +      G +++WGR  SG++G G+  D   P+ V    G       +SAG 
Sbjct: 182 RDHTVAVKA-----NGTLWAWGR--SGRIGLGDSGDRDEPEQV----GVDNDWIALSAGG 230

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           +H+  V   G L+  G    GQLG GD   H +P +V +  +    +I+ G RHSL +  
Sbjct: 231 SHTVAVKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDW-AKKISAGRRHSLAVKA 289

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D     ++ +G  + GQLG+     R    P+  +G  + +   ISA    S A+ A+G 
Sbjct: 290 D---GSLWAWGDNEYGQLGLGDTDERHA--PE-QVG-SNTDWAAISAGRRHSLAVKADGS 342

Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           L++WG       G   T+D N P+ + +   +   + G  H L +  DG +++ G +H G
Sbjct: 343 LWSWGYNDSGQLGLGDTADRNAPEQVGADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLG 402

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT----------GKFHWVR 359
            L   + VS   P+ +A            I + AG  H+  V            ++  + 
Sbjct: 403 QLGLGDTVSRDAPVPIA----------SGIALVAGRNHTVAVNPDGTLRAWGDNEYGQLG 452

Query: 360 LFIISY--TP---FFPPFFINV----------IAENRAIMTWGWGEHGQLGLGNTCDQIH 404
           L ++ Y  TP        +  V          + ++  +  WG   +GQLGLG+T D+  
Sbjct: 453 LGVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRAT 512

Query: 405 PKVV 408
           P+ V
Sbjct: 513 PEQV 516



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 26/299 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG    GQLG G   D  +P+   + S +  + +     H LA+ +      G +++
Sbjct: 491 LWAWGRNNYGQLGLGDTDDRATPE--QVGSHTDWAAVNAASYHTLAVKND-----GTLWA 543

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR SSGQLG  +  D   P+ V    G       +S G +H+  V   G L+  G   +
Sbjct: 544 WGRNSSGQLGLSDTNDRHTPERV----GSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHY 599

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD     SP +V      N   ++ G+ H++ +  D     ++ +G   RGQLG+
Sbjct: 600 GQLGLGDTSDRLSPEQVGG--ESNWLAVSTGLHHTVAVKTD---GTLWAWGWNVRGQLGL 654

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                R      V +G  D +   +SA+G R+ A+ A+G L+ WG       G   T + 
Sbjct: 655 GHTSDRHAP---VQVG-SDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNR 710

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
           N P  + +   ++  + G  H L    D  +   G +H G L   +  +   P+ V  E
Sbjct: 711 NTPAQVGNDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDAPVQVGNE 769



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 166/403 (41%), Gaps = 74/403 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +WSWG    GQLG G   D  +P+   + + +   +++ GG H LA+ +      G +  
Sbjct: 343 LWSWGYNDSGQLGLGDTADRNAPE--QVGADTDWDLVSAGGEHSLAVKAD-----GTLMV 395

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G+ V    P P+        +   + AG NH+  V+  G L   GD  +
Sbjct: 396 WGLNHLGQLGLGDTVSRDAPVPIA-------SGIALVAGRNHTVAVNPDGTLRAWGDNEY 448

Query: 156 GQLGHGDYRSHSSP---VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           GQLG G  R   +P   V  S++   N         HSL L  D     ++ +G    GQ
Sbjct: 449 GQLGLGVMRYIVTPSQTVTGSAWAAVN----GGSFNHSLGLRDD---GTLWAWGRNNYGQ 501

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+     R+   P+  +G H  +   ++A    + A+  +G L+ WGR      G + T
Sbjct: 502 LGLGDTDDRAT--PE-QVGSH-TDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDT 557

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +D + P+ + S   ++  ++G +H   +  DG +   G +H+G L               
Sbjct: 558 NDRHTPERVGSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQL--------------G 603

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
           L   S  D +   Q+   +   AV TG  H V                  +  +  +  W
Sbjct: 604 LGDTS--DRLSPEQVGGESNWLAVSTGLHHTV-----------------AVKTDGTLWAW 644

Query: 387 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 429
           GW   GQLGLG+T D+  P  V         DT       SG+
Sbjct: 645 GWNVRGQLGLGHTSDRHAPVQV-------GSDTDWAAVSASGY 680



 Score = 41.6 bits (96), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 9/75 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +W+WG   DGQLG G   +  +P Q+ N +  S+VS    GG H LA  S      G + 
Sbjct: 741 LWAWGRNHDGQLGLGDTDNRDAPVQVGNETDWSTVS---GGGYHTLATMSD-----GTLR 792

Query: 95  SWGRGSSGQLGHGEM 109
           +WG  +SGQLG   M
Sbjct: 793 AWGLNTSGQLGQRTM 807


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 25/221 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG    GQLG G      +P+++   S  S+  +ACG  H+ A++       G +++
Sbjct: 251 VYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISK-----SGDLYT 305

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  GQLGHG++   L+PK V +F+  +  I  ++ G N +  VS++G LF+ G G +
Sbjct: 306 WGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEY 365

Query: 156 GQLG---------------HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           GQLG                 D+  +S P +V +  +  V ++ACG  H++ +  D   N
Sbjct: 366 GQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTD---N 422

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
            VY +G G  G LG    + + V  PQ    L   EI  +S
Sbjct: 423 DVYTWGWGSSGCLGFGDRKFQLV--PQRVPSLSGEEISSVS 461



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 34/265 (12%)

Query: 54  DELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA 112
           ++++P L++  S S  +  ++ G A+  A+TS      G V++WG    GQLG G+    
Sbjct: 216 NQMTPVLVDFGSKSIKIVDISAGWAYSAAVTST-----GNVYTWGFNEKGQLGLGDRWYH 270

Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
             P+ +        +I +I+ G  H   +S SG L+T G G FGQLGHG  +S   P KV
Sbjct: 271 GNPRVIRSLSNK--SIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKV 328

Query: 173 SSF--VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR--------- 221
             F    K + Q+A G   ++ + ++    +++ FG G+ GQLG ++D            
Sbjct: 329 LYFEQQQKKIVQVATGANFTMAVSEN---GELFSFGHGEYGQLGATEDTQYMDWNNNGDR 385

Query: 222 ----SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
                 SLP+    L  +++  ++     + A++ +  +YTWG       GF        
Sbjct: 386 DDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLV 445

Query: 272 PQSLP--SSLSFSQAALGWNHVLVL 294
           PQ +P  S    S  + G  H L++
Sbjct: 446 PQRVPSLSGEEISSVSGGEKHTLIV 470



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 36/271 (13%)

Query: 107 GEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
           GE+VD     PV   F      I  ISAGW +S  V+ +G ++T G    GQLG GD   
Sbjct: 210 GEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWY 269

Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           H +P  + S  NK++  IACG +H   + K      +Y +G G  GQLG  K  ++S+  
Sbjct: 270 HGNPRVIRSLSNKSIVNIACGRQHMAAISK---SGDLYTWGLGVFGQLGHGK--LKSLLH 324

Query: 226 PQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG-----------------FNST 266
           P+  +       +IV ++   + + A+S  G L+++G G                  N  
Sbjct: 325 PKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGD 384

Query: 267 SDVNCPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            D +   SLP       S+   + A G  H + +T D +V   G    G L   +R    
Sbjct: 385 RDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQL 444

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
            P     ++V +L G ++  ++ G +H+ +V
Sbjct: 445 VP-----QRVPSLSGEEISSVSGGEKHTLIV 470



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 162/435 (37%), Gaps = 102/435 (23%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G +G+LG  +      P L+       +  +ACG  H LALT       GKV+ 
Sbjct: 55  VYSWGRGKEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDT-----GKVYQ 109

Query: 96  WGR------GSSGQLGHGEMVDALYPKPVT----------FFDGHRYTITHISAGWN--- 136
           WG+        SG    G +V+    K             + +G +      SA  +   
Sbjct: 110 WGQLHEIDATKSGVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQ 169

Query: 137 ----HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP----VKVSSFVNKN--------- 179
                +G V+D        +  F      D +    P     KV   V+KN         
Sbjct: 170 DNPTANGLVTDD----QEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDF 225

Query: 180 ------VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
                 +  I+ G  +S  +     GN VY +G  ++GQLG+  DR    + P+V   L 
Sbjct: 226 GSKSIKIVDISAGWAYSAAVT--STGN-VYTWGFNEKGQLGLG-DRWYHGN-PRVIRSLS 280

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL--PSSLSF--------SQ 283
           +  IV I+      AA+S  G LYTWG G          +SL  P  + +         Q
Sbjct: 281 NKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQ 340

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV---------SSTRPLSVALEK-VSNL 333
            A G N  + ++ +GE+   G   +G L   E                L  +L K V  L
Sbjct: 341 VATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKAL 400

Query: 334 DGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQ 393
           + VKV ++A G  H+  VT                           +  + TWGWG  G 
Sbjct: 401 ESVKVRKVACGHLHTIAVTT--------------------------DNDVYTWGWGSSGC 434

Query: 394 LGLGNTCDQIHPKVV 408
           LG G+   Q+ P+ V
Sbjct: 435 LGFGDRKFQLVPQRV 449



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V S+G G  GQLG     D+L P ++ L     +  +ACG AH LA+T       G V+S
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTE-----FGDVYS 57

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           WGRG  G+LGH +      P  +   +  R  I  ++ G  HS  ++D+G ++  G
Sbjct: 58  WGRGKEGELGHPQKAMTAPPALIKALEHER--IVKVACGNYHSLALTDTGKVYQWG 111



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 144/349 (41%), Gaps = 58/349 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V S+G G  GQLG     D L P  +    G R  I  I+ G  HS  V++ G +++ G 
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKR--IKQIACGEAHSLAVTEFGDVYSWGR 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGH      + P  + +  ++ + ++ACG  HSL L       +VY +  G+  +
Sbjct: 61  GKEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTD---TGKVYQW--GQLHE 115

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGI----SANGDRSAALSAEGHLYTWGRGFNSTSD 268
           +  +K  ++S        GL  +E+ GI    S   D S ++   G    +     S+S 
Sbjct: 116 IDATKSGVKSQG------GL--VEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSV 167

Query: 269 VNCPQSLPSSLSFSQAALG--WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +    +    ++  Q          +V T   +     GS  G + D  +++   P+ V 
Sbjct: 168 LQDNPTANGLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMT---PVLVD 224

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
               S    +K++ I+AG  +SA VT   +                          + TW
Sbjct: 225 FGSKS----IKIVDISAGWAYSAAVTSTGN--------------------------VYTW 254

Query: 387 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G+ E GQLGLG+     +P+V+       N+   + + CG     AIS+
Sbjct: 255 GFNEKGQLGLGDRWYHGNPRVIR---SLSNKSI-VNIACGRQHMAAISK 299



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 33/159 (20%)

Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
           S+     + GW +   +T  G V   G +  G L   +R     P       + +L    
Sbjct: 229 SIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNP-----RVIRSLSNKS 283

Query: 338 VIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG 397
           ++ IA G +H A                           I+++  + TWG G  GQLG G
Sbjct: 284 IVNIACGRQHMAA--------------------------ISKSGDLYTWGLGVFGQLGHG 317

Query: 398 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
                +HPK V   ++ Q +  Q  V  G+ FT A+S +
Sbjct: 318 KLKSLLHPKKVLYFEQQQKKIVQ--VATGANFTMAVSEN 354


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 15/229 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WGAG  GQLG G   + +  P+L+       +S + CG  H +AL+       G++
Sbjct: 104 QVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK-----DGQL 158

Query: 94  FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F WG  SSGQLG G+     L P+P+    G    +T ISAG +HS  +S SG +F  G 
Sbjct: 159 FVWGENSSGQLGLGKGEPSTLSPQPLKSLCG--IPLTQISAGGDHSFALSFSGAVFGWGK 216

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            + GQLG  D +  + P  +    ++ V  I+CG  H+  L K+     ++ FG+G +GQ
Sbjct: 217 NSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKE---GGLFTFGNGSKGQ 273

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWG 260
           LG   D  R+  LP+  + L   E+  I+   + + A + + G +Y +G
Sbjct: 274 LG--HDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFG 320



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 38/337 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V++ G+ + GQLG    HD+    P+L+       +S ++CG AH LA+        G+V
Sbjct: 55  VYTCGSNSCGQLG----HDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQ-----GQV 105

Query: 94  FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG G  GQLG G   +A+  P+ +     HR  I+ +  G +H   +S  G LF  G+
Sbjct: 106 FAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR--ISQVMCGNHHCIALSKDGQLFVWGE 163

Query: 153 GTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQLG G    S  SP  + S     + QI+ G  HS  L        V+G+G    G
Sbjct: 164 NSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL---SFSGAVFGWGKNSAG 220

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG++ ++ R+V  P     L   ++V IS   + +AAL+ EG L+T+G       G +S
Sbjct: 221 QLGLNDEQDRAV--PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS 278

Query: 266 TSDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML--------SDP 314
           T +   P+ +   +    SQ A G NH L      G +   G +  G L          P
Sbjct: 279 TRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSP 338

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             VS+ +PL +     +  +   + +I +G +H+ ++
Sbjct: 339 VPVSNIQPLCIG-NAYTRTEHCTIAKIHSGGDHNFLL 374



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++ WG  + GQLG G+     LSPQ L       ++ ++ GG H  AL+       G V
Sbjct: 157 QLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS-----FSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+ S+GQLG  +  D   P  + F    +  + +IS G  H+  ++  G LFT G+G
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK--VVYISCGEEHTAALTKEGGLFTFGNG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH   R+   P +V   +   V QIACG  H+L  +       +Y FG   +GQL
Sbjct: 270 SKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPST--GLIYAFGCNTQGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 138/323 (42%), Gaps = 34/323 (10%)

Query: 39  WGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WG+   GQLG G     +  P+   +     +  +ACG  H L L        G V++ G
Sbjct: 5   WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLH-----DGSVYTCG 59

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             S GQLGH +      P+ V   D  +  I+ +S G  HS  V++ G +F  G G  GQ
Sbjct: 60  SNSCGQLGHDK--GGSRPELVGALDAQK--ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQ 115

Query: 158 LGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           LG G   +    V+V   + K     + Q+ CG  H + L KD    Q++ +G    GQL
Sbjct: 116 LGLG---TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKD---GQLFVWGENSSGQL 169

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+ K    ++S PQ    L  I +  ISA GD S ALS  G ++ WG+      G N   
Sbjct: 170 GLGKGEPSTLS-PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQ 228

Query: 268 D--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D  V C      S      + G  H   LT +G +   G    G L      +   P   
Sbjct: 229 DRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLP--- 285

Query: 326 ALEKVSNLDGVKVIQIAAGAEHS 348
              +V  L G +V QIA G  H+
Sbjct: 286 --RRVMELMGTEVSQIACGRNHT 306



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 151/359 (42%), Gaps = 59/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG   +GQLG G    +++ P+    FDG    +  ++ G  HS F+   G ++TCG
Sbjct: 2   MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGR--GLKEVACGNQHSLFLLHDGSVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             + GQLGH   +  S P  V +   + +  ++CG  HSL + +     QV+ +G+G  G
Sbjct: 60  SNSCGQLGHD--KGGSRPELVGALDAQKISGVSCGQAHSLAVNEQ---GQVFAWGAGDGG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      +V +P++   L +  I  +        ALS +G L+ WG   NS+  +  
Sbjct: 115 QLGLGTAE-EAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGE--NSSGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS+LS            +Q + G +H   L+  G V   G +  G L   +     
Sbjct: 172 GKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  +       L   KV+ I+ G EH+A +T                          + 
Sbjct: 232 VPCHIKF-----LRSQKVVYISCGEEHTAALT--------------------------KE 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +T ++  P+ V   +G E       R+  L     +G  YA 
Sbjct: 261 GGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAF 319


>gi|363734309|ref|XP_421009.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Gallus gallus]
          Length = 394

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 174/426 (40%), Gaps = 73/426 (17%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           GA + GQLG G   D L PQLL   S     +  +A GG H   +T       G++F  G
Sbjct: 3   GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITG-----AGELFVCG 57

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
              +GQLG     D L     T   G  + +  ++ GW+ +  +  +G + +CG   FGQ
Sbjct: 58  HNKAGQLGLNHTEDVLCFTLCTALSG--FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQ 115

Query: 158 LGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----KRG 211
           LG          P K+   + +    IA G+RH+L   +  L   V+ +G+G     KR 
Sbjct: 116 LGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGL---VFQWGTGMASRAKRV 172

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSD 268
             G +     +   P    GL D+++  ++A      +L+ EGHLY WG    G   + +
Sbjct: 173 HQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSLTGEGHLYVWGSNKHGQLVSKE 232

Query: 269 VNC--PQSLPSSLSFSQAALG-----WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           V    P+ + +   FS   +G     W H++  T  G+V   G + +G L     V   +
Sbjct: 233 VFLVEPKKIDTQF-FSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAVVPDGQ 291

Query: 322 PLSVALEK-----------VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
               A E+           +  L+G    QIA G+EH+  V G                 
Sbjct: 292 ETCTASEQPVKLFCNIPISLPCLNGAS--QIACGSEHNLAVVGD---------------- 333

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
                        ++WGW EHG  G G   +   PK V    +      Q+ + CG+G +
Sbjct: 334 -----------CCLSWGWNEHGMCGDGTEANVHVPKPV----KALGYAKQILIGCGAGHS 378

Query: 431 YAISRH 436
            A+ ++
Sbjct: 379 LALCQN 384



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 20/114 (17%)

Query: 35  KVWSWGAGTDGQLGT------GRLHDELSPQ--------LLNLSSLSSVSMLACGGAHVL 80
           KV++WG    GQLG       G+     S Q         ++L  L+  S +ACG  H L
Sbjct: 269 KVFTWGRADYGQLGRHAVVPDGQETCTASEQPVKLFCNIPISLPCLNGASQIACGSEHNL 328

Query: 81  ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           A      V+G    SWG    G  G G   +   PKPV      +  +    AG
Sbjct: 329 A------VVGDCCLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAG 376


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 164/396 (41%), Gaps = 81/396 (20%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYT 127
           +  +ACGGAH  A+        G V++WG    GQLGH  E  +   P  V   +     
Sbjct: 39  LKAVACGGAHTAAVDDS-----GTVYTWGLNDKGQLGHDSEDSEVGLPGEVAMPE----R 89

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACG 186
           +  +SAG+ H+  V +SG +++ G    GQLG G D      P  V S  +  V  +A G
Sbjct: 90  VVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAG 149

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLG---VSKDRIRSVS---LPQVTIGLHDIEIVGI 240
           M HSL L     G +VY +G+   G+LG    +  R+   S   LP++      + +  +
Sbjct: 150 MEHSLALTA---GGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQV 206

Query: 241 SANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS-SLSFSQAALGWNHVLV 293
           SA    SAA+S  G  + WG G      F S  D+  P  LP    S +  A G  H L 
Sbjct: 207 SAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGSTAAVACGSLHSLA 266

Query: 294 LTGDGEVLMLGGSHHGMLSD--PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           L   G VL  G + +G+L     ++    RP        S + GV   QIAAG +HSA V
Sbjct: 267 LQYGGHVLAWGTNQNGVLGQGHEKQQQPKRP--------SKVPGVSAEQIAAGWKHSAAV 318

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW--------------GEHGQLGLG 397
           TG                          +  + TWGW              G  GQLG G
Sbjct: 319 TG--------------------------SGKLYTWGWGGSQGTALSFEGRTGTGGQLGHG 352

Query: 398 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           N  D   P  V   D     +T L V CG   T AI
Sbjct: 353 NDFDYWSPHHV---DWLSLTETDL-VACGMNHTAAI 384



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 113/238 (47%), Gaps = 27/238 (11%)

Query: 36  VWSWGAGTDGQLGTGR---LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           VWS+G    GQLG G+   L  E  P+L+     + V  +A G  H LALT+     GG+
Sbjct: 109 VWSFGCNGKGQLGLGKDVVLVRE--PRLVKSLQDNKVVAVAAGMEHSLALTA-----GGE 161

Query: 93  VFSWGRGSSGQLGHGEMVD--------ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           V+SWG  ++G+LGHG               P+ V  F+  R  +  +SAG  HS  VS +
Sbjct: 162 VYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALR--VEQVSAGQMHSAAVSTA 219

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G  F  G G F QLG G     + P  V   +  +   +ACG  HSL L     G  V  
Sbjct: 220 GDAFLWGYGKFHQLGFGSDEDLAGPT-VLPPLKGSTAAVACGSLHSLALQ---YGGHVLA 275

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           +G+ + G LG   ++ +    P    G+   +   I+A    SAA++  G LYTWG G
Sbjct: 276 WGTNQNGVLGQGHEKQQQPKRPSKVPGVSAEQ---IAAGWKHSAAVTGSGKLYTWGWG 330



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 75/171 (43%), Gaps = 23/171 (13%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG G   QLG G   D   P +L      S + +ACG  H LAL       GG V +WG 
Sbjct: 225 WGYGKFHQLGFGSDEDLAGPTVLPPLK-GSTAAVACGSLHSLALQ-----YGGHVLAWGT 278

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG------- 151
             +G LG G       PK  +   G   +   I+AGW HS  V+ SG L+T G       
Sbjct: 279 NQNGVLGQGHEKQQ-QPKRPSKVPG--VSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGT 335

Query: 152 -------DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
                   GT GQLGHG+   + SP  V          +ACGM H+  +++
Sbjct: 336 ALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVE 386



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 99/245 (40%), Gaps = 46/245 (18%)

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---- 260
           FG+G  G+LG S +   S  LP+V   L  + +  ++  G  +AA+   G +YTWG    
Sbjct: 8   FGNGDCGRLGHSLE-YASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDK 66

Query: 261 --RGFNST-SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
              G +S  S+V  P  +         + G+ H L +   G V   G +  G L   + V
Sbjct: 67  GQLGHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDV 126

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHW---------------VR 359
              R   +    V +L   KV+ +AAG EHS  +T     + W                R
Sbjct: 127 VLVREPRL----VKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRR 182

Query: 360 LF--IISYTPFFPPFFINVIAE--------NRAIMT------WGWGEHGQLGLGNTCDQI 403
           LF   I + P     F  +  E        + A+ T      WG+G+  QLG G+  D  
Sbjct: 183 LFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLA 242

Query: 404 HPKVV 408
            P V+
Sbjct: 243 GPTVL 247


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+++G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G +GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 152/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALASD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G   +G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 162/381 (42%), Gaps = 71/381 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW+WG    GQLG G       P Q+LNLS    V  L+ G  H +AL S      G V+
Sbjct: 207 VWAWGDNRYGQLGDGTTTQRAVPVQVLNLSG---VMNLSAGSFHTVALRSD-----GSVW 258

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQLG G       P  V   D     +  + AG  HS  V   G ++  GD  
Sbjct: 259 AWGFNAYGQLGDGTTTSRFQPVQVGLSD-----VLTLVAGNYHSLAVRSDGAVWAWGDNR 313

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           + QLG G   + SS V V S ++  V  +A G +HSLVL  D     V+ +G    GQLG
Sbjct: 314 YRQLGDG--TTTSSRVPVQSGLSGGVTLVA-GYKHSLVLRSD---GTVWSWGDNVFGQLG 367

Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NST- 266
                 R  +V +  +++G  D+     S+    S  L + G ++ WG  +     N T 
Sbjct: 368 DGTFNPRSSAVKVSWLSLGRADV-----SSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTG 422

Query: 267 --SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             S V  P  L  S++ S    G+ H LVL  D  V   G + HG L D      TRP+ 
Sbjct: 423 LDSLVAAPVGLGGSVAVSA---GFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQ 479

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           VA      L GV           SAV  G +H + L                   N  + 
Sbjct: 480 VA-----GLSGV-----------SAVSAGSYHSLAL-----------------RSNGTVW 506

Query: 385 TWGWGEHGQLGLGNTCDQIHP 405
            WG+  +GQLG G   D++ P
Sbjct: 507 AWGFNRYGQLGDGTNTDRLQP 527



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 160/396 (40%), Gaps = 59/396 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG    GQLG G       P  + LS    V  L  G  H LA+ S      G V+
Sbjct: 256 SVWAWGFNAYGQLGDGTTTSRFQPVQVGLSD---VLTLVAGNYHSLAVRSD-----GAVW 307

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG     QLG G    +  P       G       + AG+ HS  +   G +++ GD  
Sbjct: 308 AWGDNRYRQLGDGTTTSSRVPVQSGLSGG-----VTLVAGYKHSLVLRSDGTVWSWGDNV 362

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLG G +   SS VKV S+++     ++ G  HS+VL  +     V+ +G    GQLG
Sbjct: 363 FGQLGDGTFNPRSSAVKV-SWLSLGRADVSSGQLHSVVLDSN---GAVWAWGDNYSGQLG 418

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
                   V+ P   +GL     V +SA    +  L A+  ++ WG       G  + +D
Sbjct: 419 NGTGLDSLVAAP---VGLG--GSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTD 473

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +      S  + G  H L L  +G V   G + +G L D       +P+ VA  
Sbjct: 474 RTRPVQVAGLSGVSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVA-- 531

Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTGKFHWVRLFII-------SYTPFFPP--------- 371
               L G  V+ +AAG  HS A+ +    W   +         SY+  F P         
Sbjct: 532 ---GLSG--VVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSWRFLPVQVVGLSGV 586

Query: 372 -------FFINVIAENRAIMTWGWGEHGQLGLGNTC 400
                  +    +  +  + TWG+   GQLG G+T 
Sbjct: 587 VSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTA 622



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 176/408 (43%), Gaps = 62/408 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G L D  SP  + +++LS V  +A G  H L L+S      G V++
Sbjct: 57  VWAWGFNRQGQLGDGTLVD--SPTPVRVTNLSGVVSVASGDYHSLGLSSD-----GTVWA 109

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  ++GQLG+G    +  P  V    G    +  + +G++H   +   G ++  GD  +
Sbjct: 110 WGDNTAGQLGNGTASASPVPVRVQNLSG----VVSLGSGFSHGLALRSDGTVWAWGDNRY 165

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            QLG+      + PV+V       V  +  G  +SL L  D     V+ +G  + GQLG 
Sbjct: 166 NQLGNVGATRSNLPVQVPGL--SGVIAVVAGGYYSLALRSD---GTVWAWGDNRYGQLGD 220

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----NC 271
                R+V + QV   L+   ++ +SA    + AL ++G ++ W  GFN+   +      
Sbjct: 221 GTTTQRAVPV-QV---LNLSGVMNLSAGSFHTVALRSDGSVWAW--GFNAYGQLGDGTTT 274

Query: 272 PQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
            +  P  +  S       G  H L +  DG V   G + +  L D    SS  P+   L 
Sbjct: 275 SRFQPVQVGLSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQSGLS 334

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGK---FHW-----VRLFIISYTPFFPPFFINVIAEN 380
                 GV ++   AG +HS V+      + W      +L   ++ P      ++ ++  
Sbjct: 335 G-----GVTLV---AGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVSWLSLG 386

Query: 381 RAIMT---------------WGWGEH--GQLGLGNTCDQIHPKVVNLG 411
           RA ++               W WG++  GQLG G   D +    V LG
Sbjct: 387 RADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLG 434



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 130/295 (44%), Gaps = 32/295 (10%)

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
           L   SS + LA G  H + + S      G V++WG    GQLG G +VD+  P  VT   
Sbjct: 32  LGGRSSAARLALGQYHSVGVHSD-----GTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS 86

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           G    +  +++G  HS  +S  G ++  GD T GQLG+G   +   PV+V +     V  
Sbjct: 87  G----VVSVASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASASPVPVRVQNL--SGVVS 140

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           +  G  H L L  D     V+ +G  +  QLG +    RS +LP    GL    ++ + A
Sbjct: 141 LGSGFSHGLALRSD---GTVWAWGDNRYNQLG-NVGATRS-NLPVQVPGLS--GVIAVVA 193

Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
            G  S AL ++G ++ WG       G  +T+    P  + +       + G  H + L  
Sbjct: 194 GGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNLSGVMNLSAGSFHTVALRS 253

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           DG V   G + +G L D    S  +P+ V L          V+ + AG  HS  V
Sbjct: 254 DGSVWAWGFNAYGQLGDGTTTSRFQPVQVGLS--------DVLTLVAGNYHSLAV 300



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 166/407 (40%), Gaps = 64/407 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI--GGKV 93
           VWSWG    GQLG G  +          SS   VS L+ G A V +    S V+   G V
Sbjct: 355 VWSWGDNVFGQLGDGTFNPR--------SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAV 406

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG   SGQLG+G  +D+L   PV            +SAG+ H+  +     ++  G  
Sbjct: 407 WAWGDNYSGQLGNGTGLDSLVAAPVGLGGS-----VAVSAGFKHTLVLKADTTVWAWGVN 461

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G     + PV+V+      V  ++ G  HSL L  +     V+ +G  + GQL
Sbjct: 462 EHGQLGDGTLTDRTRPVQVAGL--SGVSAVSAGSYHSLALRSN---GTVWAWGFNRYGQL 516

Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------S 265
           G   + DR++ V +  ++       +V ++A    S AL ++G ++ WG  F+      S
Sbjct: 517 GDGTNTDRLQPVQVAGLS------GVVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGS 570

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            S    P  +         + G  H L L  DG V   G +  G L D    +  +P  V
Sbjct: 571 YSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGS-TAINKPAPV 629

Query: 326 ALEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHWVRLF-----------IISYTPFFPPFF 373
              +V+ L GV  + + +G  HS  + +    W   F           +   TP      
Sbjct: 630 ---QVAGLSGV--VSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPVRVSGL 684

Query: 374 INVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             V++             +  +  WG+   GQLG G   D + P  V
Sbjct: 685 SGVVSVVAGDYHSLARRSDGTVWAWGYNGEGQLGDGTRNDTLVPVWV 731



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 118/297 (39%), Gaps = 50/297 (16%)

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           G R +   ++ G  HS  V   G ++  G    GQLG G      +PV+V++     V  
Sbjct: 33  GGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRVTNL--SGVVS 90

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE-IVGIS 241
           +A G  HSL L  D     V+ +G    GQLG       + S   V + + ++  +V + 
Sbjct: 91  VASGDYHSLGLSSD---GTVWAWGDNTAGQLGNG-----TASASPVPVRVQNLSGVVSLG 142

Query: 242 ANGDRSAALSAEGHLYTWGRG-FNSTSDV-----NCPQSLPSSLSFSQAALGWNHVLVLT 295
           +      AL ++G ++ WG   +N   +V     N P  +P          G  + L L 
Sbjct: 143 SGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPGLSGVIAVVAGGYYSLALR 202

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
            DG V   G + +G L D        P+     +V NL GV  + ++AG+ H+       
Sbjct: 203 SDGTVWAWGDNRYGQLGDGTTTQRAVPV-----QVLNLSGV--MNLSAGSFHTVA----- 250

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                +  + ++  WG+  +GQLG G T  +  P  V L D
Sbjct: 251 ---------------------LRSDGSVWAWGFNAYGQLGDGTTTSRFQPVQVGLSD 286


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGH--VREGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+++G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G +GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 153/362 (42%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH  + +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGH--VREGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALASD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G   +G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHVREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 117/227 (51%), Gaps = 16/227 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V + G G+ G+LG G  +++   + LN   S ++ +S       H LALTS      G+V
Sbjct: 427 VRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSE-----GQV 481

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           FSWG G  G+LGHG  +   YPK +      +  +  ISAG+ HS  V+D G L+T G+G
Sbjct: 482 FSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVC-ISAGYRHSACVTDDGQLYTWGEG 540

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LGHGD  S + P  V      NV ++ CG  H++ + +D     V+ FG G  G+L
Sbjct: 541 DYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQD--SRTVWSFGGGDNGKL 596

Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
           G    +RI    + +  IGL    I  +      S AL++ G L T+
Sbjct: 597 GHGDTNRIYKPKIIESLIGLF---IKKVGCGSQSSLALTSTGQLCTF 640



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 11/190 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG+ +  QL  G     L P++    S +    +  G      ++S      G V 
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKILLPKMA--ISFAESQQIEAGQYCTFVISS-----DGSVR 428

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G+GS G+LG G+  +    K + F +     I+       H+  ++  G +F+ GDG 
Sbjct: 429 ACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGD 488

Query: 155 FGQLGHGDYRSHSSP-VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +G+LGHG+  +   P V +   + K V  I+ G RHS  +  D    Q+Y +G G  G+L
Sbjct: 489 YGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDD---GQLYTWGEGDYGRL 545

Query: 214 GVSKDRIRSV 223
           G      R+V
Sbjct: 546 GHGDSNSRNV 555



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 48/283 (16%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           +S  VS++  +F  G  +  QL  G       P    SF      QI  G   + V+  D
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAES--QQIEAGQYCTFVISSD 424

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGH 255
                V   G G  G+LG+  D      L ++      I  +  S   D  + AL++EG 
Sbjct: 425 ---GSVRACGKGSYGRLGLG-DSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 256 LYTWGRG------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGS 306
           +++WG G        +T     P+ +   L        + G+ H   +T DG++   G  
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
            +G L   +  S++R +   ++ VSN     V ++  G+ H+                  
Sbjct: 541 DYGRLGHGD--SNSRNVPTLVKDVSN-----VGKVVCGSSHT------------------ 575

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                  I V  ++R + ++G G++G+LG G+T     PK++ 
Sbjct: 576 -------IAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIE 611


>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 158/385 (41%), Gaps = 52/385 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG    GQLG G   D  +P  ++L + ++++ +A   A+  ALTS      G V 
Sbjct: 55  TVLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTS-----TGAVL 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + G+LG G   D   P  V    G   T+T I+ G  H+  ++ +G L   G   
Sbjct: 110 AWGNNTGGELGDGTNTDRTTPVAVKLPTG--TTVTAIAVGTFHTLALTSTGALLAWGGNG 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FG+LG G   + + PV V+      +  IA G  HSL L        V  +G    GQLG
Sbjct: 168 FGELGDGTTTARNEPVPVNVPAGTTITAIAGGRGHSLALTST---GTVLAWGKNNEGQLG 224

Query: 215 VSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              D   + S   V + L     +  I+  G  S AL++ G +  WG       G  +T+
Sbjct: 225 ---DGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGTTT 281

Query: 268 DVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D + P    LP   + +  A G  H + LT  G VL  G +  G L D     ST P+ V
Sbjct: 282 DRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDV 341

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
            L   + +  +     A    HS  +T                              I+ 
Sbjct: 342 NLPPDTTITAIT----AHDGSHSLALT--------------------------STGTILA 371

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNL 410
           WG    G+LG G T ++  P  VNL
Sbjct: 372 WGLNSSGELGDGTTTNRSTPVDVNL 396



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 129/336 (38%), Gaps = 48/336 (14%)

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           SPS V    V +WG    GQLG G  +D+  P  V    G   TIT I+    +S  ++ 
Sbjct: 47  SPSGVASDTVLTWGENDFGQLGDGTTIDSSTPVDVDLPAG--TTITAIAGSDANSFALTS 104

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +G +   G+ T G+LG G     ++PV V       V  IA G  H+L L        + 
Sbjct: 105 TGAVLAWGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTST---GALL 161

Query: 204 GFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
            +G    G+LG      R+  +P  V  G     I  I+     S AL++ G +  WG+ 
Sbjct: 162 AWGGNGFGELGDGTTTARNEPVPVNVPAG---TTITAIAGGRGHSLALTSTGTVLAWGKN 218

Query: 262 -------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                  G N+ S       LP   + +  A G ++   LT  G VL  G +  G + D 
Sbjct: 219 NEGQLGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDG 278

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                + P+ V L       G  V  IA G  HS  +T                      
Sbjct: 279 TTTDRSTPVDVDLPP-----GTTVTAIAGGEGHSVALTSA-------------------- 313

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                   ++ WG    GQLG G T D   P  VNL
Sbjct: 314 ------GTVLAWGLNSSGQLGDGTTTDSTTPVDVNL 343



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 8/160 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG  + GQ+G G   D  +P  ++L   ++V+ +A G  H +ALTS      G V 
Sbjct: 263 TVLAWGLNSSGQVGDGTTTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTS-----AGTVL 317

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA-GWNHSGFVSDSGCLFTCGDG 153
           +WG  SSGQLG G   D+  P  V        TIT I+A   +HS  ++ +G +   G  
Sbjct: 318 AWGLNSSGQLGDGTTTDSTTPVDVNLP--PDTTITAITAHDGSHSLALTSTGTILAWGLN 375

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           + G+LG G   + S+PV V+      V  I  G  HS+ L
Sbjct: 376 SSGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDDHSMAL 415


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 161/373 (43%), Gaps = 61/373 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WG  T GQLG G   D   P  + ++ LS V  +A GG H LA+ S      G V+
Sbjct: 168 SVWAWGRNTSGQLGDGTRDDRAVP--VQVTGLSGVVSVAAGGNHSLAVRSD-----GSVW 220

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  +SGQLG     +A YP P    D     +  ++AG  HS  V   G ++  GD  
Sbjct: 221 AWGNNASGQLGGAP--EAAYPVPWRVED--VSGVVAVAAGQYHSLAVRYDGTVWAWGDNL 276

Query: 155 FGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           +GQLG G    +S   P +V       V  ++ G  HSLV+  D     V+ +G+   GQ
Sbjct: 277 YGQLGDGKLEGNSRWLPKQVPGL--GGVVAVSAGFYHSLVVRSD---GTVWAWGNNAYGQ 331

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
           LG    R  + S  QV   L     V ++A    S  ++++G L+ WG      RG  + 
Sbjct: 332 LG-GGSRAHAASPVQV---LGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTL 387

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           +    P  +P        A G  HVL L  DG V   G +  G L D  R S   P    
Sbjct: 388 TRYPTPGRVPGLSGVVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWVP---- 443

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L GV  + +AAG+  S              + Y              + ++ +W
Sbjct: 444 -RQVPELSGV--VAVAAGSSFS------------LAVRY--------------DGSVWSW 474

Query: 387 GWGEHGQLGLGNT 399
           G   +GQLG G+T
Sbjct: 475 GDNAYGQLGHGST 487



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 135/318 (42%), Gaps = 31/318 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG     +   P  + ++ LS V  +  G  H LA+ S      G V++
Sbjct: 119 VWAWGNNAYGQLGDDTRDNRTVP--VQVTGLSGVVSVVAGDTHSLAVRSD-----GSVWA 171

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR +SGQLG G   D   P  VT   G    +  ++AG NHS  V   G ++  G+   
Sbjct: 172 WGRNTSGQLGDGTRDDRAVPVQVTGLSG----VVSVAAGGNHSLAVRSDGSVWAWGNNAS 227

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG     ++  P +V       V  +A G  HSL +  D     V+ +G    GQLG 
Sbjct: 228 GQLGGAPEAAYPVPWRVEDV--SGVVAVAAGQYHSLAVRYD---GTVWAWGDNLYGQLGD 282

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
            K    S  LP+   GL    +V +SA    S  + ++G ++ WG       G  S +  
Sbjct: 283 GKLEGNSRWLPKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHA 340

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P  +         A G+ H LV+  DG +   G +  G   D        P      +
Sbjct: 341 ASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTP-----GR 395

Query: 330 VSNLDGVKVIQIAAGAEH 347
           V  L G  V+ +AAG  H
Sbjct: 396 VPGLSG--VVSVAAGGGH 411



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 146/361 (40%), Gaps = 76/361 (21%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG+  DGQ G G L    +P    +  LS V  +A GG HVLAL S      G V++
Sbjct: 371 LWAWGSNLDGQRGDGTLTRYPTPG--RVPGLSGVVSVAAGGGHVLALLSD-----GTVWA 423

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  +SGQLG G       P+ V    G    +  ++AG + S  V   G +++ GD  +
Sbjct: 424 WGDNASGQLGDGTRHSRWVPRQVPELSG----VVAVAAGSSFSLAVRYDGSVWSWGDNAY 479

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
           GQLGHG   + S P+ V       V  +A G  H+L +  D     V+G+G    GQLG 
Sbjct: 480 GQLGHGSTDASSVPLHVREL--SEVVAVAAGSMHALAVRAD---GTVWGWGFNDYGQLGD 534

Query: 215 ----VSKDRIRSVSLP----QVTIGL---HDIEIVG------------------------ 239
               +S  R   V +P     V++     H + +                          
Sbjct: 535 GFEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRL 594

Query: 240 -------------ISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLS 280
                        +SA  + S A+ A+G L+ WG  F       ST+    P  +   + 
Sbjct: 595 VPLRVNAPGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVR 654

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
            S  A G +H + +  DG +   G +  G L D        P+     +V  + GV  + 
Sbjct: 655 ASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPV-----RVPGMSGVVAVD 709

Query: 341 I 341
           +
Sbjct: 710 V 710



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 137/325 (42%), Gaps = 37/325 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+ G    GQLG G      +P  + +  LS V+ +A G  H LAL        G V++
Sbjct: 69  VWTTGGNGHGQLGDGTTLSRRTP--VQVQGLSGVAAVAAGHGHSLALR-----YDGTVWA 121

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG     +   P  VT   G    +  + AG  HS  V   G ++  G  T 
Sbjct: 122 WGNNAYGQLGDDTRDNRTVPVQVTGLSG----VVSVVAGDTHSLAVRSDGSVWAWGRNTS 177

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G     + PV+V+      V  +A G  HSL +  D     V+ +G+   GQLG 
Sbjct: 178 GQLGDGTRDDRAVPVQVTGL--SGVVSVAAGGNHSLAVRSD---GSVWAWGNNASGQLGG 232

Query: 216 SKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVN--- 270
           + +    V        + D+  +V ++A    S A+  +G ++ WG   +    D     
Sbjct: 233 APEAAYPVPWR-----VEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEG 287

Query: 271 ----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
                P+ +P        + G+ H LV+  DG V   G + +G L    R  +  P+ V 
Sbjct: 288 NSRWLPKQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQV- 346

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVV 351
                 L     + +AAG  HS VV
Sbjct: 347 ------LGVSGAVAVAAGYRHSLVV 365



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 24/267 (8%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++ G    GQLG G  +    P  V    G    +  ++AG  HS  +   G ++  
Sbjct: 67  GTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSG----VAAVAAGHGHSLALRYDGTVWAW 122

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+  +GQLG     + + PV+V+      V  +  G  HSL +  D     V+ +G    
Sbjct: 123 GNNAYGQLGDDTRDNRTVPVQVTGL--SGVVSVVAGDTHSLAVRSD---GSVWAWGRNTS 177

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           GQLG      R+V + QVT GL    +V ++A G+ S A+ ++G ++ WG       G  
Sbjct: 178 GQLGDGTRDDRAVPV-QVT-GLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGA 233

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
             +    P  +         A G  H L +  DG V   G + +G L D +   ++R L 
Sbjct: 234 PEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLP 293

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVV 351
              ++V  L G  V+ ++AG  HS VV
Sbjct: 294 ---KQVPGLGG--VVAVSAGFYHSLVV 315



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 97/222 (43%), Gaps = 24/222 (10%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  V   G ++T G    GQLG G   S  +PV+V       V  +A G  HSL L  D
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGL--SGVAAVAAGHGHSLALRYD 116

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ +G+   GQLG      R+V + QVT GL    +V + A    S A+ ++G +
Sbjct: 117 ---GTVWAWGNNAYGQLGDDTRDNRTVPV-QVT-GLSG--VVSVVAGDTHSLAVRSDGSV 169

Query: 257 YTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           + WGR      G  +  D   P  +         A G NH L +  DG V   G +  G 
Sbjct: 170 WAWGRNTSGQLGDGTRDDRAVPVQVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNNASGQ 229

Query: 311 LSD-PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           L   PE   +  P+   +E VS      V+ +AAG  HS  V
Sbjct: 230 LGGAPE---AAYPVPWRVEDVSG-----VVAVAAGQYHSLAV 263



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 23/228 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQL---LNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           VW WG    GQLG G   + +S +    + +  LS +  +A    H LA+ +      G 
Sbjct: 521 VWGWGFNDYGQLGDG--FEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRAD-----GT 573

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WG  +  +LG G     L P  V        T+  +SAG+N+S  +   G L+  G 
Sbjct: 574 VWAWGNNTDSELGDGTTTRRLVPLRVNAPG----TVALLSAGYNYSMAMRADGSLWAWGT 629

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   S + PV+V   V  +   +A G  HS+ +  D     ++ +G    GQ
Sbjct: 630 NFAGQLGDGSTTSRAVPVRVQGPVRAST--LAAGQSHSMAVGSDGF---LWAWGFNFEGQ 684

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           LG     +   +LP    G+  +  V ++ N   S A+ ++G L+ WG
Sbjct: 685 LG--DGTLTHHALPVRVPGMSGVVAVDVTLN--LSLAVRSDGSLWAWG 728


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 13/217 (5%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG  + GQLG G+       SPQ +   S   V  ++ GG H  AL+     + G 
Sbjct: 142 QVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALS-----VSGS 196

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF WGR   GQLG G+  D   P  V + +  +      + G +H+  ++  G +FT G 
Sbjct: 197 VFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFA--ACGKDHTAVLTMDGTVFTFGS 254

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH  +R+   P  V+      V +IACG  H+LVL       +VY FG  + GQ
Sbjct: 255 GHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHM---KVYSFGCNEHGQ 311

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           LG  ++    V LP V +      I  I A GD S A
Sbjct: 312 LGPREETHPCVPLP-VQLPREGPIIQNIFAGGDSSFA 347



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 137/314 (43%), Gaps = 66/314 (21%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            +SD+G +F C D       H  +    +P  + +     V Q+ACG +H++VL KD   
Sbjct: 94  LLSDTGVVF-CVDSP-----HPPF----TPRSLEALSGITVTQVACGSQHTVVLSKD--- 140

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            QVY +G   RGQLG+ K+   S+S PQ    L  + +V +SA GD S ALS  G ++ W
Sbjct: 141 GQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGW 200

Query: 260 GR------GFNSTSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGM 310
           GR      G   T+D   P +L   L+  +   AA G +H  VLT DG V   G  H+G 
Sbjct: 201 GRNDCGQLGLGDTTDRETP-TLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQ 259

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L      ++  P  VA      L G KV +IA G  H+ V+T                  
Sbjct: 260 LGHNSFRNALCPRLVA-----ELWGAKVTKIACGRYHTLVLT------------------ 296

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE---FQNRDTQLEVFCGS 427
                   ++  + ++G  EHGQLG         P  V L  E    QN      +F G 
Sbjct: 297 --------DHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREGPIIQN------IFAGG 342

Query: 428 GFTYAISRHCLPSQ 441
             ++A    C P Q
Sbjct: 343 DSSFAT---CRPEQ 353



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 10/208 (4%)

Query: 53  HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA 112
           H   +P+ L   S  +V+ +ACG  H + L+       G+V++WG+ S GQLG G+   +
Sbjct: 108 HPPFTPRSLEALSGITVTQVACGSQHTVVLSK-----DGQVYTWGQNSRGQLGLGKEGCS 162

Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
               P          +  +SAG +HS  +S SG +F  G    GQLG GD     +P  V
Sbjct: 163 SISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLV 222

Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
                K     ACG  H+ VL  D     V+ FGSG  GQLG   +  R+   P++   L
Sbjct: 223 HYLNMKKTVFAACGKDHTAVLTMD---GTVFTFGSGHYGQLG--HNSFRNALCPRLVAEL 277

Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWG 260
              ++  I+     +  L+    +Y++G
Sbjct: 278 WGAKVTKIACGRYHTLVLTDHMKVYSFG 305



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 19/232 (8%)

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY--RSHSSPVKVSSFVNKNVHQIA 184
           T+T ++ G  H+  +S  G ++T G  + GQLG G     S SSP  V S  +  V Q++
Sbjct: 123 TVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVS 182

Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
            G  HS  L    +   V+G+G    GQLG+     R    P +   L+  + V  +   
Sbjct: 183 AGGDHSFAL---SVSGSVFGWGRNDCGQLGLGDTTDRET--PTLVHYLNMKKTVFAACGK 237

Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
           D +A L+ +G ++T+G       G NS  +  CP+ +        ++ A G  H LVLT 
Sbjct: 238 DHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTD 297

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +V   G + HG L   E      PL V L +    +G  +  I AG + S
Sbjct: 298 HMKVYSFGCNEHGQLGPREETHPCVPLPVQLPR----EGPIIQNIFAGGDSS 345


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDQ---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSDQ-----GQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q   G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          +N
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KN 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 152/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT +G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +  GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ +G +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKNGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+  G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----NGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 159/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  H+L L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHNLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      +V++P+V   L+   I+ +S     S AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 152/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +H+  +SD G LF+ G G+ GQLG      + + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  HSL L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHSLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHNLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     DA+   P      ++ TI  +S G  HS  ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDAV-AVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +  R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEEDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 158/383 (41%), Gaps = 56/383 (14%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G G     +   PQ     S  SV  +ACGG H + L        G+V++ 
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLE-----DGEVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 59  GLNTKGQLGHER--EGNQPEQIGALADQH---IIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATD---GQFFTWGKNSHGQLG 170

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229

Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
               C   L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+              +++ P            +  I  +
Sbjct: 286 -RRVLELMGSEVTQIACGRQHT--------------LAFVP-----------SSGLIYAF 319

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN 409
           G G  GQLG G+TC+   P  V 
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 121/247 (48%), Gaps = 21/247 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWGAG+DGQLG     D ++ P+L+   +  ++  ++CG  H LAL +      G+ 
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAT-----DGQF 158

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG+ S GQLG G E      P+ V   +G    +  ++AG  HS  +S SG +F  G 
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGM 216

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG  D +   SP  V     + V  I+CG  H+ VL K      V+ FG+G  GQ
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQ 273

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFNS------ 265
           LG   D +     P+  + L   E+  I+     + A + + G +Y +G G         
Sbjct: 274 LG--HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGH 331

Query: 266 TSDVNCP 272
           T +V CP
Sbjct: 332 TCNVKCP 338



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 117/272 (43%), Gaps = 50/272 (18%)

Query: 151 GDGTFGQLGHGDY-RSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G  + GQ G G + R   +  +   FV +++V ++ACG  H + LL+D    +VY  G  
Sbjct: 5   GYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLED---GEVYTCGLN 61

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
            +GQLG      R  + P+    L D  I+ ++     S ALS +G L++WG G      
Sbjct: 62  TKGQLG----HEREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG 117

Query: 263 FNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVS 318
             +T D      L   L   +  Q + G  H L L  DG+    G + HG L    E  S
Sbjct: 118 LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPS 177

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            T P     ++V +L+G+ + Q+AAG  HS            F +S +            
Sbjct: 178 QTSP-----QRVRSLEGIPLAQVAAGGAHS------------FALSLS------------ 208

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
              A+  WG    GQLGL +  D+  P  V L
Sbjct: 209 --GAVFGWGMNNAGQLGLSDEKDRESPCHVKL 238



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLED-----GEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 12/213 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
           G       +V  P    G        +SA  DR
Sbjct: 328 GTG--HTCNVKCPSPVKGYWAAHSGQLSARADR 358



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 24/271 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSDR-----GQLF 106

Query: 95  SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG GS GQLG     D++  P+ +   +  + TI  +S G  H   ++  G  FT G  
Sbjct: 107 SWGAGSDGQLGLMTTEDSVAVPRLIQKLN--QQTILQVSCGNWHCLALAADGQFFTWGKN 164

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQ
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQ 221

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S 
Sbjct: 222 LGLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 267 SDVNCPQSLPSSL--SFSQAALGWNHVLVLT 295
           +D   P+ +   +    +Q A G  H L   
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 156/381 (40%), Gaps = 62/381 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++W+WG    GQLG G   D   P  +NL+ + SV   A G  H  AL S      G V+
Sbjct: 419 RLWAWGDNQQGQLGNGTQQDSSLPLPVNLTDVISV---ASGYRHTAALRSD-----GTVW 470

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G + D   P  V    G    +T I+ G NHS  +  +G ++  G   
Sbjct: 471 TWGMNRFGQLGEGTVTDRPTPVQVVGLGG----VTAIATGDNHSLALRSNGTVWAWGFNR 526

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G       PV+ S     N+  IA G  HSL L  D     V+ FG    GQLG
Sbjct: 527 YGQLGDGTAVDRRQPVQASGL--SNIVAIAAGGSHSLALRSD---GTVWAFGYNFDGQLG 581

Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
              +  R+ +L P   +GL    +V ++A    S AL A+G ++ WG       G  +T 
Sbjct: 582 ---NGTRTWTLVPVQAVGLS--SVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQ 636

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
               P  +P     +  A G  H L L  DG V   G +  G L +        P  VA 
Sbjct: 637 GSAQPLQVPGLSGITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPGLVA- 695

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
             +SN      + I AG +HS                            +  +  +  WG
Sbjct: 696 -GMSN-----AVAIIAGDQHSLA--------------------------MKADGTVWAWG 723

Query: 388 WGEHGQLGLGNTCDQIHPKVV 408
               GQLG G+T +   P  V
Sbjct: 724 LNIKGQLGTGDTTEAWFPVQV 744



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 161/382 (42%), Gaps = 58/382 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G L   L PQ   +S+LS+V  LA G AHVLAL +      G V++
Sbjct: 121 VWAWGDNASGQLGDGTLTSRLLPQ--RVSALSNVVSLASGFAHVLALRAD-----GTVWA 173

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   + QLG G +  +  P  V    G    +  + AG + S  +   G L+  GD  +
Sbjct: 174 WGDNRNNQLGDGTLTRSSVPLQVPGLSG----VVAVVAGGSSSLALRADGTLWAWGDNRY 229

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G      +PV+V+S    +V  ++ G  H+L L  D     V+ +G    GQLG 
Sbjct: 230 GQLGDGTTVRRITPVQVASL--DSVVSVSVGAYHALALRAD---GTVWAWGHNAYGQLGD 284

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSDVNC 271
             +  R+     V++ L D+    + A    S A+  +G ++ WG    R   + +  + 
Sbjct: 285 GTNTQRT---QPVSVSLTDVRT--LVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSS 339

Query: 272 PQSLPSSLSFSQAAL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           P  L + ++     + G+ H + L  DG     G +  G L D        P+ V+   +
Sbjct: 340 PLPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLAL 399

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
              D                 +G+ H V                 ++  N  +  WG  +
Sbjct: 400 GRAD---------------ATSGQLHTV-----------------MLGANGRLWAWGDNQ 427

Query: 391 HGQLGLGNTCDQIHPKVVNLGD 412
            GQLG G   D   P  VNL D
Sbjct: 428 QGQLGNGTQQDSSLPLPVNLTD 449



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 35/319 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G       P  +   SL+ V  L  G  H LA+ +      G V++
Sbjct: 271 VWAWGHNAYGQLGDGTNTQRTQPVSV---SLTDVRTLVAGNYHSLAVRTD-----GAVWA 322

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG     QLG G +  +  P       G       + AG+ HS  +   G  ++ GD  F
Sbjct: 323 WGDNRYRQLGTGNLTSSPLPLQAGMTGG-----VTLVAGYRHSVALGADGTAWSWGDNVF 377

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG   +    +PV+VS          + G  H+++L  +    +++ +G  ++GQLG 
Sbjct: 378 GQLGDTTFEPRMAPVQVSGLALGRADATS-GQLHTVMLGAN---GRLWAWGDNQQGQLGN 433

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
              +  S+ LP     ++  +++ +++    +AAL ++G ++TWG       G  + +D 
Sbjct: 434 GTQQDSSLPLP-----VNLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDR 488

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P  +      +  A G NH L L  +G V   G + +G L D   V   +P  V    
Sbjct: 489 PTPVQVVGLGGVTAIATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQP--VQASG 546

Query: 330 VSNLDGVKVIQIAAGAEHS 348
           +SN     ++ IAAG  HS
Sbjct: 547 LSN-----IVAIAAGGSHS 560



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 163/386 (42%), Gaps = 73/386 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GKV 93
            WSWG    GQLG       ++P          VS LA G A   +    + ++G  G++
Sbjct: 369 AWSWGDNVFGQLGDTTFEPRMAP--------VQVSGLALGRADATSGQLHTVMLGANGRL 420

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG    GQLG+G   D+  P PV   D     +  +++G+ H+  +   G ++T G  
Sbjct: 421 WAWGDNQQGQLGNGTQQDSSLPLPVNLTD-----VISVASGYRHTAALRSDGTVWTWGMN 475

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            FGQLG G      +PV+V       V  IA G  HSL L  +     V+ +G  + GQL
Sbjct: 476 RFGQLGEGTVTDRPTPVQVVGL--GGVTAIATGDNHSLALRSN---GTVWAWGFNRYGQL 530

Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------ 265
           G   + DR + V    ++       IV I+A G  S AL ++G ++ +G  F+       
Sbjct: 531 GDGTAVDRRQPVQASGLS------NIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGT 584

Query: 266 -TSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
            T  +   Q+  L S +S +  +L   + L L  DG V   G +  G L       S +P
Sbjct: 585 RTWTLVPVQAVGLSSVVSLAAGSL---YSLALRADGTVWAWGYNASGQLGVGTTQGSAQP 641

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           L     +V  L G+    IAAG+ HS                            +  +  
Sbjct: 642 L-----QVPGLSGIT--SIAAGSYHSLA--------------------------LRSDGW 668

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  WG+   GQLG G +  ++ P +V
Sbjct: 669 VWAWGFNFEGQLGNGTSTPRLSPGLV 694



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 120/313 (38%), Gaps = 50/313 (15%)

Query: 108 EMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
           ++  A  P+  T     G R     ++ G  HS  V   G +F  G    GQLG G  R 
Sbjct: 30  DLPGAAAPREATVRQRAGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRD 89

Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
            +SPV+V+      V  +A G ++SL L  D     V+ +G    GQLG     + S  L
Sbjct: 90  KASPVQVAGLT--QVTSVAAGDQYSLALDAD---GAVWAWGDNASGQLG--DGTLTSRLL 142

Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSL 279
           PQ    L +  +V +++      AL A+G ++ WG   N      + +  + P  +P   
Sbjct: 143 PQRVSALSN--VVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLS 200

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
                  G +  L L  DG +   G + +G L D   V    P                +
Sbjct: 201 GVVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITP----------------V 244

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
           Q+A+     +V  G +H + L                   +  +  WG   +GQLG G  
Sbjct: 245 QVASLDSVVSVSVGAYHALAL-----------------RADGTVWAWGHNAYGQLGDGTN 287

Query: 400 CDQIHPKVVNLGD 412
             +  P  V+L D
Sbjct: 288 TQRTQPVSVSLTD 300


>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
 gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
          Length = 423

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 30/297 (10%)

Query: 36  VWSWGAGTDGQLGTGR-LHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++S G G+ G LG  + + D E+ P+ +      ++  L+ G  H +  T         +
Sbjct: 97  LYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDKG------L 150

Query: 94  FSWGRGSSGQLGHGEMVDALY--------PKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           FSWGR   GQL +GE+   +         P+ +   D     I  + +G +HS  ++  G
Sbjct: 151 FSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSGSDHSLVLNKDG 210

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
            +++ G G FG  G G   + ++P K+       NK V  IACG  HSL+L  D   N++
Sbjct: 211 TVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSD---NEI 267

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA--LSAEGHLYTWG 260
           Y FG G+ GQLG S++  ++   P+    ++    +     G  + +  +  +G +Y+WG
Sbjct: 268 YSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSVFAGSHATSFYVDEKGDVYSWG 327

Query: 261 ------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                  GF    +V  P  + S  +  + A G+ H L LT D +V + G +  G L
Sbjct: 328 WGEGGTLGFGDNQNVYVPTQVKSLSNIKKIAAGFKHTLALTNDNQVYVFGDNTFGQL 384



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 17/191 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM---LACGGAHVLALTSPSSVIGGK 92
           V+SWG G  G  G G+  +  +P  +  +      +   +ACGG H L LTS +     +
Sbjct: 212 VYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSDN-----E 266

Query: 93  VFSWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTITHISAGWNHSGF-VSDSGCLFT 149
           ++S+G G  GQLGH E     Y  PK +   +     I  + AG + + F V + G +++
Sbjct: 267 IYSFGWGEYGQLGHSENDTKNYYSPKKIESINSST-KIKSVFAGSHATSFYVDEKGDVYS 325

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G G  G LG GD ++   P +V S    N+ +IA G +H+L L  D   NQVY FG   
Sbjct: 326 WGWGEGGTLGFGDNQNVYVPTQVKSL--SNIKKIAAGFKHTLALTND---NQVYVFGDNT 380

Query: 210 RGQLGVSKDRI 220
            GQLG  ++ +
Sbjct: 381 FGQLGSKQNNV 391



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 52/283 (18%)

Query: 147 LFTCGDGTFGQLGHGDYRS--HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           L++ G G++G LG           P ++ +  N+N+  ++ G  HS+V     L    + 
Sbjct: 97  LYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDKGL----FS 152

Query: 205 FGSGKRGQLGVS------KDRIRSVSLPQVTIGLHDI--EIVGISANGDRSAALSAEGHL 256
           +G   +GQL         KD+I   S PQ           I  + +  D S  L+ +G +
Sbjct: 153 WGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSGSDHSLVLNKDGTV 212

Query: 257 YTWGRGFNSTSDVNCPQSL--PSSLSFSQA---------ALGWNHVLVLTGDGEVLMLGG 305
           Y+WG G+   + +    ++  P+ + F++          A G  H L+LT D E+   G 
Sbjct: 213 YSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSDNEIYSFGW 272

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
             +G L   E  +        +E +++    K+  + AG+ H+                 
Sbjct: 273 GEYGQLGHSENDTKNYYSPKKIESINS--STKIKSVFAGS-HA----------------- 312

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           T F+       + E   + +WGWGE G LG G+  +   P  V
Sbjct: 313 TSFY-------VDEKGDVYSWGWGEGGTLGFGDNQNVYVPTQV 348



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 103/259 (39%), Gaps = 60/259 (23%)

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           +L   + N +Y  G G  G LG+ K+       P+    L +  I+ +S+  + S   + 
Sbjct: 88  ILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTD 147

Query: 253 EGHLYTWGRG-----------------FNSTSDVNCPQSLPSSLS----FSQAALGWNHV 291
           +G L++WGR                   N +S    PQ + +S S      +   G +H 
Sbjct: 148 KG-LFSWGRSDKGQLANGELKSEIKDQINYSSK---PQFIKNSDSTFRNIKKVCSGSDHS 203

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           LVL  DG V   G  + G     ++ +   P  +   K   L+   V+ IA G  HS ++
Sbjct: 204 LVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNK--ELENKLVLDIACGGYHSLIL 261

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG--LGNTCDQIHPKVVN 409
           T                           +  I ++GWGE+GQLG    +T +   PK + 
Sbjct: 262 TS--------------------------DNEIYSFGWGEYGQLGHSENDTKNYYSPKKI- 294

Query: 410 LGDEFQNRDTQLE-VFCGS 427
              E  N  T+++ VF GS
Sbjct: 295 ---ESINSSTKIKSVFAGS 310



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 37/192 (19%)

Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD----VNCPQSL 275
           I  + LP     L +I    I A+   SA L+ +   Y WG   N  S+    +    + 
Sbjct: 16  IADMDLP---TKLLNITATDIFASAYHSALLNDKNEFYHWGLFSNIVSEAPNVIEIKDNN 72

Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
             +     A+LG N +L+LT D ++  +G   +G+L   + +   + L V  +++  L  
Sbjct: 73  KKNNKIKDASLGGNFILMLTIDNDLYSMGKGSYGVLGLDKEM---KDLEVEPKRIETLKN 129

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
             +I +++G EHS V T                           ++ + +WG  + GQL 
Sbjct: 130 RNIISLSSGYEHSIVTT---------------------------DKGLFSWGRSDKGQLA 162

Query: 396 LGNTCDQIHPKV 407
            G    +I  ++
Sbjct: 163 NGELKSEIKDQI 174


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  ANTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDQ---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWGR  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGR--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q   G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 150/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGANTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGRNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  + A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +  GGAH  AL+     + G V
Sbjct: 157 QFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ GA T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGANTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSDQ-----GQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+  G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 455 MLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADR-SVKEVACGGNHSVFLLEDGEVYTCG 513

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 514 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 568

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 569 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 625

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 626 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 685

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L     L   KV+ I+ G EH+AV+T                          ++
Sbjct: 686 SPCHVKL-----LRTQKVVYISCGEEHTAVLT--------------------------KS 714

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 715 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 773



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 161/383 (42%), Gaps = 56/383 (14%)

Query: 39  WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQ G +  L   ++ PQ+    +  SV  +ACGG H + L        G+V++ 
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLE-----DGEVYTC 512

Query: 97  GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF+ G G+ 
Sbjct: 513 GLNTKGQLGHER--EGNKPEQIGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSD 567

Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG
Sbjct: 568 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 624

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           + K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D
Sbjct: 625 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 683

Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              P    L  +      + G  H  VLT  G V   G    G L          P    
Sbjct: 684 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 739

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
             +V  L G +V QIA G +H+              +++ P            +  I  +
Sbjct: 740 -RRVLELMGSEVTQIACGRQHT--------------LAFVP-----------SSGLIYAF 773

Query: 387 GWGEHGQLGLGNTCDQIHPKVVN 409
           G G  GQLG G+TC+   P  V 
Sbjct: 774 GCGARGQLGTGHTCNVKCPSPVK 796



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 12/213 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 611 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 665

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 666 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 723

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 724 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 781

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
           G       +V  P    G        +SA  DR
Sbjct: 782 GTG--HTCNVKCPSPVKGYWAAHSGQLSARADR 812



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 508 EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSD-----RGQLF 560

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 561 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 619

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 620 HGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 676

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 677 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 734

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 735 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 781


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 143/327 (43%), Gaps = 29/327 (8%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           + ++ WG  + GQLG G + DE  L P  +     + +  +ACG  H L LT+      G
Sbjct: 1   MDLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTA-----NG 55

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           KV++ G     QLGH    +    +P+   +   Y +  I+ G  HS  +++ G + + G
Sbjct: 56  KVYACGNNDQAQLGH----NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWG 111

Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           D   GQLG   D      P  + S V+K+V QIACG  HSL  L  C   ++Y +GS   
Sbjct: 112 DNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLA-LTSC--GELYSWGSNIY 168

Query: 211 GQLGVS-KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           GQLGV     +   + P     L  I +  I+  G+ S  +S    ++ +GR      G 
Sbjct: 169 GQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           N  S+   P  L +  +L     A G    + LT +G V   G   +G L      +   
Sbjct: 229 NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML 288

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
           P       V  L G  + Q+A G  H+
Sbjct: 289 P-----RMVMELMGSTITQVACGNRHT 310



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 106/201 (52%), Gaps = 16/201 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIG 90
           +++SWG+   GQLG  +   ELS     L L++L  + +  +ACGG H   ++  S+V G
Sbjct: 159 ELYSWGSNIYGQLGV-KPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFG 217

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
                +GR + GQLG  +  +  YP  +         +  ++ G   S F+++ G +FTC
Sbjct: 218 -----FGRNNCGQLGLNDESNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTC 270

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G GT+GQLGHG   +   P  V   +   + Q+ACG RH+L L+      +VYGFG G  
Sbjct: 271 GAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYGFGLGSS 328

Query: 211 GQLGVSKDRIRSVSLPQVTIG 231
           GQLG       SV+LPQ  +G
Sbjct: 329 GQLG--NRSTNSVTLPQEVLG 347



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 149/354 (42%), Gaps = 56/354 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WG  S GQLG G + D     P          +  I+ G  H+ F++ +G ++ CG+
Sbjct: 3   LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGN 62

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
               QLGH        P+ +    N  V  IACG RHS+ L +     QV  +G    GQ
Sbjct: 63  NDQAQLGHN--LPTKRPLLIPELQNYVVVAIACGSRHSMALTE---WGQVLSWGDNDCGQ 117

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG S D+   + LP++   L    +V I+   + S AL++ G LY+WG        V  P
Sbjct: 118 LGQSTDQ-SIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPP 176

Query: 273 QSL-----PSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           Q L     P  L+       +  A G NH  +++    V   G ++ G L   +   S R
Sbjct: 177 QELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDE--SNR 234

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
                L+ +  L GV+   +A G E S  +T +                           
Sbjct: 235 AYPTQLKTLRTL-GVRF--VACGDEFSVFLTNE--------------------------G 265

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAI 433
            + T G G +GQLG G+  +++ P++V   +G       T  +V CG+  T A+
Sbjct: 266 GVFTCGAGTYGQLGHGSNTNEMLPRMVMELMG------STITQVACGNRHTLAL 313


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++ WG    GQLG  +    + SPQ L       V+ ++ GG H   L+     + G V
Sbjct: 138 QLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLS-----LSGVV 192

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  S+GQLG G+  D   P  V    G +     IS G  H+  +S  G +FT G G
Sbjct: 193 FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK--TVSISCGGEHTATLSKGGTVFTFGSG 250

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            FGQLGH   +    P  V+      V Q+ CG  H+LVL+   L N++Y FG G +GQL
Sbjct: 251 GFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLV--ALTNRIYSFGCGMQGQL 308

Query: 214 GVSKDRIRSVSLP 226
           G  +   +SV LP
Sbjct: 309 GNGEQVKQSVPLP 321



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 138/322 (42%), Gaps = 46/322 (14%)

Query: 44  DGQLGTGRLHDELSPQLLNLSSLS----SVSMLACG--GAHVLALTSPSSVIGGKVFSWG 97
           DG++   RL DE   Q   L  L      +  + CG  GA +LA        GGKV    
Sbjct: 52  DGKVSVLRLRDEDCNQDGKLKQLDLKREKIRSIVCGEDGAVLLA-------DGGKVLLMD 104

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
           + +               +P+   D  +  +  I+ G  HS  +S+ G LF  G+   GQ
Sbjct: 105 KYTVC-------------RPLKGLDNTK--VIQIACGDQHSVALSNDGQLFVWGENAHGQ 149

Query: 158 LGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           LG    ++   SP  + S     V QI+ G  HS VL    L   V+G+GS   GQLG+ 
Sbjct: 150 LGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVL---SLSGVVFGWGSNSAGQLGLG 206

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
               R V  P +   L   + V IS  G+ +A LS  G ++T+G       G NS  D +
Sbjct: 207 DTTDRFV--PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEH 264

Query: 271 CPQSLPSSL---SFSQAALGWNHVLVLTG-DGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            P+ L + L     SQ   G +H LVL      +   G    G L + E+V  + PL V 
Sbjct: 265 HPR-LVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVL 323

Query: 327 LEKVSNLDGVKVIQIAAGAEHS 348
           L    N +   + +I AG +HS
Sbjct: 324 LPTDCNCE-FTMEKIIAGEKHS 344



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++G+G  GQLG   L DE  P+L+     S VS + CG  H L L +    +  +++S
Sbjct: 244 VFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVA----LTNRIYS 299

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHS 138
           +G G  GQLG+GE V    P PV         +T+  I AG  HS
Sbjct: 300 FGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHS 344



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 67/250 (26%)

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS-----------------LPQVTI-- 230
           S++ L+D   NQ      GK  QL + +++IRS+                  + + T+  
Sbjct: 56  SVLRLRDEDCNQ-----DGKLKQLDLKREKIRSIVCGEDGAVLLADGGKVLLMDKYTVCR 110

Query: 231 ---GLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPS--S 278
              GL + +++ I+     S ALS +G L+ WG             + +  PQ L S   
Sbjct: 111 PLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCG 170

Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
           +  +Q + G NH  VL+  G V   G +  G L   +      P       V +L G K 
Sbjct: 171 IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTI-----VKSLSGKKT 225

Query: 339 IQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
           + I+ G EH+A                           +++   + T+G G  GQLG  +
Sbjct: 226 VSISCGGEHTA--------------------------TLSKGGTVFTFGSGGFGQLGHNS 259

Query: 399 TCDQIHPKVV 408
             D+ HP++V
Sbjct: 260 LKDEHHPRLV 269


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 180/423 (42%), Gaps = 97/423 (22%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WG+  +GQL   +   +  L P+ L++ +L ++  + CG  H + LT     I G+
Sbjct: 8   ELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLT-----IDGE 62

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+S G     QLGHG+    L  K V       Y I  ++ G  H+  ++ +G LFT G 
Sbjct: 63  VYSCGCNEFQQLGHGQSGGQL-AKVVAL---EHYRIISVACGAYHNAAITYNGLLFTWGC 118

Query: 153 GTFGQLGH-GDYRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            + GQLG  GD     + VK V +  +  V Q++ G+ H+LVL       +V+ FGS  +
Sbjct: 119 NSNGQLGREGD----DTGVKLVRALSDHKVVQVSLGVEHTLVLTDTA---RVFAFGSNLK 171

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---------- 260
           GQLG+     +SVS+PQ  + L  + +  I A G  S  L+  G LY WG          
Sbjct: 172 GQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLS 231

Query: 261 --------------------------------RGFN----STSDVNCPQSLPS--SLSFS 282
                                           R F+    S S+V+ P  + +       
Sbjct: 232 YFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVV 291

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
             A G  H + LT DG V   G   +G L   E   ST  +SV   K++   G  V QIA
Sbjct: 292 YLACGETHTVALTRDGGVFTFGAGRYGQLGHNE---STIGISVP-RKITEFMGNVVTQIA 347

Query: 343 AGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQ 402
            G  H+  +  K    RLF                        +G G + QLG+G+T ++
Sbjct: 348 CGRFHTLALVPKTG--RLF-----------------------AFGQGTNAQLGMGDTKNR 382

Query: 403 IHP 405
           + P
Sbjct: 383 LLP 385



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 50/234 (21%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE---LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +V+++G+   GQLG G   ++   +  Q+L LS L  V  +  GG H   LT     + G
Sbjct: 162 RVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLP-VRRIVAGGWHSFVLT-----VSG 215

Query: 92  KVFSWGRGSSGQLG-----------HGEM-----------VDALYPK-----PV------ 118
            +++WG  + GQLG             E+           VD    K     P+      
Sbjct: 216 SLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSN 275

Query: 119 ----TFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKV 172
               TF    R   + +++ G  H+  ++  G +FT G G +GQLGH +     S P K+
Sbjct: 276 VSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKI 335

Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           + F+   V QIACG  H+L L+      +++ FG G   QLG+   + R +  P
Sbjct: 336 TEFMGNVVTQIACGRFHTLALVPKT--GRLFAFGQGTNAQLGMGDTKNRLLPCP 387



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 9/106 (8%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYT 127
           V  LACG  H +ALT       G VF++G G  GQLGH E    +  P+ +T F G+   
Sbjct: 290 VVYLACGETHTVALTR-----DGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGN--V 342

Query: 128 ITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
           +T I+ G  H+   V  +G LF  G GT  QLG GD ++   P  V
Sbjct: 343 VTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPV 388



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 13/88 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELS-----PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           V+++GAG  GQLG    H+E +     P+ +     + V+ +ACG  H LAL   +    
Sbjct: 309 VFTFGAGRYGQLG----HNESTIGISVPRKITEFMGNVVTQIACGRFHTLALVPKT---- 360

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPV 118
           G++F++G+G++ QLG G+  + L P PV
Sbjct: 361 GRLFAFGQGTNAQLGMGDTKNRLLPCPV 388


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLED-----GEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 93/182 (51%), Gaps = 10/182 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 GV 215
           G 
Sbjct: 328 GT 329



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 24/271 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSDR-----GQLF 106

Query: 95  SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG GS GQLG     D++  P+ +   +  + TI  +S G  H   ++  G  FT G  
Sbjct: 107 SWGAGSDGQLGLMTTEDSVAVPRLIQKLN--QQTILQVSCGNWHCLALAADGQFFTWGKN 164

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQ
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQ 221

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S 
Sbjct: 222 LGLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 267 SDVNCPQSLPSSL--SFSQAALGWNHVLVLT 295
           +D   P+ +   +    +Q A G  H L   
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-----GGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 92/180 (51%), Gaps = 10/180 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++WG G  GQLG G L D   P+ +     + ++S LACG  H L  T       G V+
Sbjct: 167 LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTES-----GDVY 221

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G   + +Y  PV         +T ++AG  HS  V+++G LFT G G 
Sbjct: 222 TWGSNEFGQLGIGRY-NEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGA 280

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ GHGDY     P  V S V   + ++ CG   ++ L KD   N +Y FG+   GQLG
Sbjct: 281 EGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKD---NDIYVFGNNSYGQLG 337



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 163/358 (45%), Gaps = 63/358 (17%)

Query: 93  VFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +++WGR  + +LG  G   D+  P+ +  F+     I  ++ G  H+  + + GCL + G
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFE--NCAIQQVACGGGHTLVLLEDGCLHSFG 69

Query: 152 DGTFGQLGHGDYRSHSSPVK----VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
              +GQLG+G      SP+     +SS  NK +  +ACG  HS  L    +   V+ +G 
Sbjct: 70  YNQYGQLGNG--TKVDSPLDASRDISSLSNKLI-AVACGRYHSAALD---VNGTVFTWGG 123

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN--- 264
           GK G+LG + ++ R++   ++T   H      I      +AA++ +G LYTWG G +   
Sbjct: 124 GKNGRLGHNDEQTRTIPC-RIT---HLPRAHKIFCGYHITAAITDDG-LYTWGWGEHGQL 178

Query: 265 ---STSDVNCPQSL---PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              S  D   P+ +    ++L+ SQ A G  H LV T  G+V   G +  G L     + 
Sbjct: 179 GQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLG----IG 234

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
               +  +   +++L G+ V  +AAG  HSA VT                          
Sbjct: 235 RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVT-------------------------- 268

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAISR 435
              ++ TWG G  GQ G G+  D   P +V +L   F      L+VFCG  FT A+S+
Sbjct: 269 NTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVF-----ILKVFCGHNFTVALSK 321



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 141/355 (39%), Gaps = 69/355 (19%)

Query: 27  EEEEQQVVKVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSP 85
            +E +    +++WG   + +LG  G   D   P+L+ +    ++  +ACGG H L L   
Sbjct: 3   RKEYRASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLED 62

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
                G + S+G    GQLG+G  VD+               I  ++ G  HS  +  +G
Sbjct: 63  -----GCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIA-VACGRYHSAALDVNG 116

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSF------------------------------ 175
            +FT G G  G+LGH D ++ + P +++                                
Sbjct: 117 TVFTWGGGKNGRLGHNDEQTRTIPCRITHLPRAHKIFCGYHITAAITDDGLYTWGWGEHG 176

Query: 176 --------------------VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
                                N  + Q+ACG RH LV  +      VY +GS + GQLG+
Sbjct: 177 QLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTE---SGDVYTWGSNEFGQLGI 233

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
            +      S P +   L  + +  ++A    SAA++  G L+TWG G          +D 
Sbjct: 234 GRYN-EIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDC 292

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           + P  + S   +   +   G N  + L+ D ++ + G + +G L D  + S   P
Sbjct: 293 DMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTP 347



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 91/219 (41%), Gaps = 46/219 (21%)

Query: 252 AEGHLYTWGRGFN------STSDVNCPQSLPS---SLSFSQAALGWNHVLVLTGDGEVLM 302
           A   LYTWGR  N       T D +C   L     + +  Q A G  H LVL  DG +  
Sbjct: 8   ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV--VTGK-FHW-- 357
            G + +G L +  +V S    S  +  +SN    K+I +A G  HSA   V G  F W  
Sbjct: 68  FGYNQYGQLGNGTKVDSPLDASRDISSLSN----KLIAVACGRYHSAALDVNGTVFTWGG 123

Query: 358 ------------VRLF--IISYTP----FFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
                        R     I++ P     F  + I     +  + TWGWGEHGQLG G+ 
Sbjct: 124 GKNGRLGHNDEQTRTIPCRITHLPRAHKIFCGYHITAAITDDGLYTWGWGEHGQLGQGSL 183

Query: 400 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 438
            D   PK V + D+     +QL   CG        RHCL
Sbjct: 184 EDSYGPKKV-IFDDANLAISQLA--CG-------DRHCL 212



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKV 93
           V++WG+   GQLG GR ++  S  +L L+SL+   V+ +A G  H  A+T+      G +
Sbjct: 220 VYTWGSNEFGQLGIGRYNEIYSSPVL-LTSLAGMMVTFVAAGDRHSAAVTNT-----GSL 273

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG G+ GQ GHG+  D   P  V    G    I  +  G N +  +S    ++  G+ 
Sbjct: 274 FTWGCGAEGQCGHGDYNDCDMPFLVESLVG--VFILKVFCGHNFTVALSKDNDIYVFGNN 331

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           ++GQLG G   S  +P K+   +   +  I CG  H
Sbjct: 332 SYGQLGDGSKSSCCTPRKLFFSIPGTI-DITCGHFH 366



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 107/262 (40%), Gaps = 44/262 (16%)

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQ 201
           S  L+T G     +LG    R  S  P  +  F N  + Q+ACG  H+LVLL+D CL   
Sbjct: 9   SSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCL--- 65

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            + FG  + GQLG +  ++ S       I     +++ ++     SAAL   G ++TWG 
Sbjct: 66  -HSFGYNQYGQLG-NGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGG 123

Query: 262 GFNSTSDVNCPQS--LPSSLSFSQAA----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           G N     N  Q+  +P  ++    A     G++    +T DG +   G   HG L    
Sbjct: 124 GKNGRLGHNDEQTRTIPCRITHLPRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGS 182

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
              S  P  V  +  +    + + Q+A G  H  V T                       
Sbjct: 183 LEDSYGPKKVIFDDAN----LAISQLACGDRHCLVRT----------------------- 215

Query: 376 VIAENRAIMTWGWGEHGQLGLG 397
              E+  + TWG  E GQLG+G
Sbjct: 216 ---ESGDVYTWGSNEFGQLGIG 234


>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Takifugu rubripes]
          Length = 388

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 174/415 (41%), Gaps = 67/415 (16%)

Query: 41  AGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           A + GQLG G + D   P L + ++L   +V ++  GG H   +T       G+VF  G+
Sbjct: 2   ANSYGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITED-----GEVFVCGQ 56

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG G + D      +    G   T+T+++ GW+ + F++DSG + +CG   FGQL
Sbjct: 57  NHRGQLGLGHLTDI---STLQRCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQL 113

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           G G   ++++ V++   +   V  +A G+RHSL +       Q +G G   + +  +S  
Sbjct: 114 GIGQKPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQ-WGIGLMSQAKRTLSPS 172

Query: 219 RIRS---VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDVN 270
            + S     LP +  GL+      ++A       L+  G L+ WG        +S   ++
Sbjct: 173 PVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQLLSSEPFLS 232

Query: 271 CPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
            P  +  SL   +  L    GW H++  T  G V   G  ++G L      S +      
Sbjct: 233 SPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQST 292

Query: 327 L--------EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
                    E+V  L G    QI  G+EH+  + G                         
Sbjct: 293 TEDQEVRLPEEVPALQGAT--QITCGSEHNLAILGG------------------------ 326

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
               +++WGW EHG  G G+  D   P++V            L + CG+G + A+
Sbjct: 327 ---RLLSWGWNEHGMCGDGSHADVFQPQLV-------PALRPLLIGCGAGHSMAV 371


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 80  MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 138

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 139 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 193

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 194 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 250

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 251 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 310

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 311 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 339

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 340 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 398



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 104 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 156

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 157 IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 213

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 214 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 269

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 270 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 329

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 330 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 384

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 385 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 419

Query: 408 VN 409
           V 
Sbjct: 420 VK 421



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 236 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 290

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 291 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 348

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 349 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 406

Query: 214 G 214
           G
Sbjct: 407 G 407



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 134/287 (46%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 133 EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSD-----RGQLF 185

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 186 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 244

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 245 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 301

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +  R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 302 GLSDEEDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 359

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 360 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 406



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 344

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 345 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 402

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 403 RGQLGTG----HTCNVKCPSPVK 421


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 154/382 (40%), Gaps = 65/382 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG   DGQLG G      SP    +  ++  + +A G  H +A +       G V++
Sbjct: 94  VWAWGNNDDGQLGDGTTTRRFSP----VQVMTGATAIAAGIYHTVAASQD-----GTVWT 144

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR SSGQLG G  +    P  V    G    +T ++AG NHS  +   G ++T GD   
Sbjct: 145 WGRNSSGQLGDGTSIQRFSPVQVQGLTG----VTAVAAGRNHSAALGQGGTVWTWGDNLV 200

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G      +PV+V       V  I+     ++ L +D     V+ +G+   GQLG 
Sbjct: 201 GQLGDGTSTQRLTPVQVQGLT--GVIAISANDSETVALRQD---GTVWAWGNNSSGQLGD 255

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
               +R    P   +GL    +  I+A G  + AL  +G L+ WG       G  +T   
Sbjct: 256 GTTTVRFT--PVQVLGL--TGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGS 311

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P+ +      +  A    H + L  DG +   G +  G L D        P+     +
Sbjct: 312 YRPEQVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPV-----Q 366

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           V  L GV    IAAG                            ++  +A  +    W WG
Sbjct: 367 VQGLTGVTA--IAAG----------------------------YLYTVASKQDGTVWAWG 396

Query: 390 --EHGQLGLGNTCDQIHPKVVN 409
             E GQLG G T  ++ P  V 
Sbjct: 397 DNEWGQLGDGTTTRRLTPVQVQ 418



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 167/400 (41%), Gaps = 55/400 (13%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +W+WG  + GQLG G L   L+P  + +  L+ V+ +A G +H LA+        G V+S
Sbjct: 996  LWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQD-----GTVWS 1050

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  + GQLG G    +L P  V    G    +T ISAG  H+  +   G ++  G  ++
Sbjct: 1051 WGGNAYGQLGDGTTAQSLTPVQVQGLTG----VTAISAGDAHTVALRRDGTVWAWGRNSW 1106

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G     ++PV+V       V  IA G  H++ L +D     V+ +G    GQLG 
Sbjct: 1107 GQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVALRQD---GTVWAWGRNSWGQLGD 1161

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
                 R+   P    GL    ++ I+A    + AL  +G ++ WG       G  +T+  
Sbjct: 1162 GTTTHRAT--PVQVQGL--TGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRR 1217

Query: 270  NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
              P  +      +  A G+ H   +  DG     G +  G L D        P+     +
Sbjct: 1218 LTPAQVQGLTGVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPV-----Q 1272

Query: 330  VSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFINVIAENR 381
            V  L GV  +  AAG  H+ VV         G     +L   S T    P  +  +    
Sbjct: 1273 VQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEALTGAF 1330

Query: 382  AIMT--------------WGWGEH--GQLGLGNTCDQIHP 405
            ++                WGWG +  GQ+G G T D+  P
Sbjct: 1331 SLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTP 1370



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 178/403 (44%), Gaps = 61/403 (15%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            +W+WG  + GQLG G L   L P  + +  L SV+ +A GG H+ A         G +++
Sbjct: 946  LWTWGLNSYGQLGGGPLSYRLLP--VQVQGLMSVTAMAAGGYHMAAAGQD-----GTLWT 998

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  S GQLG G +  +L P  V         +  I+AG++H+  V   G +++ G   +
Sbjct: 999  WGLNSYGQLGGGPLSQSLTPVQVQVQG--LTGVAAIAAGFSHTLAVRQDGTVWSWGGNAY 1056

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G      +PV+V       V  I+ G  H++ L +D     V+ +G    GQLG 
Sbjct: 1057 GQLGDGTTAQSLTPVQVQGLTG--VTAISAGDAHTVALRRD---GTVWAWGRNSWGQLGD 1111

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                 R+   P    GL    ++ I+A    + AL  +G ++ WGR      G  +T+  
Sbjct: 1112 GTTTHRAT--PVQVQGL--TGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHR 1167

Query: 270  NCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
              P   Q L   ++ +  +L   H + L  DG V   G +  G L D    ++TR L+ A
Sbjct: 1168 ATPVQVQGLTGVIAIAAGSL---HTVALRQDGTVWAWGFNDLGQLGDG---TTTRRLTPA 1221

Query: 327  LEKVSNLDGVKVIQIAAGAEHSAVV-------TGKFH-WVRLFIISYTPFFPPFFIN--- 375
              +V  L GV  I  AAG  H+A V       T  F+ W +L   ++T    P  +    
Sbjct: 1222 --QVQGLTGVTTI--AAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLT 1277

Query: 376  -------------VIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                         V+ E+  +  WG     QLG G++ D+  P
Sbjct: 1278 GVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTP 1320



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 166/430 (38%), Gaps = 105/430 (24%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG+   GQLG G     L+P  + +  L  V+ +A GG H+ A         G +++
Sbjct: 844  VWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQD-----GTLWT 898

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFF------------------DGHRYT---------- 127
            WG  S GQLG G +   L P  V                     DG  +T          
Sbjct: 899  WGLNSYGQLGGGPLSYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG 958

Query: 128  ------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
                              +T ++AG  H       G L+T G  ++GQLG G      +P
Sbjct: 959  GGPLSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTP 1018

Query: 170  VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
            V+V       V  IA G  H+L + +D     V+ +G    GQLG   D   + SL  V 
Sbjct: 1019 VQVQVQGLTGVAAIAAGFSHTLAVRQD---GTVWSWGGNAYGQLG---DGTTAQSLTPVQ 1072

Query: 230  I-GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSL 279
            + GL    +  ISA    + AL  +G ++ WGR      G  +T+    P   Q L   +
Sbjct: 1073 VQGL--TGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVI 1130

Query: 280  SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
            + +  +L   H + L  DG V   G +  G L D        P+     +V  L G  VI
Sbjct: 1131 AIAAGSL---HTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPV-----QVQGLTG--VI 1180

Query: 340  QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
             IAAG+ H+                            + ++  +  WG+ + GQLG G T
Sbjct: 1181 AIAAGSLHTV--------------------------ALRQDGTVWAWGFNDLGQLGDGTT 1214

Query: 400  CDQIHPKVVN 409
              ++ P  V 
Sbjct: 1215 TRRLTPAQVQ 1224



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 176/446 (39%), Gaps = 99/446 (22%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG+ + GQLG G       P+   +  L+ V+ +A  G H +AL        G +++
Sbjct: 292 LWAWGSNSRGQLGNGTTFGSYRPE--QVQGLTGVTAIAASGIHTVALRQD-----GTLWA 344

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  SSGQLG G       P  V    G    +T I+AG+ ++      G ++  GD  +
Sbjct: 345 WGNNSSGQLGDGTTTVRFTPVQVQGLTG----VTAIAAGYLYTVASKQDGTVWAWGDNEW 400

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
           GQLG G      +PV+V       V  IA G  +++   +D     V+ +G  KR QLG 
Sbjct: 401 GQLGDGTTTRRLTPVQVQGLTG--VTAIAAGYLYTVASKQD---GTVWAWGDNKRSQLGE 455

Query: 215 --------------------VSKDRIRSVSLPQ-------------------VTIGLHDI 235
                               ++   + +V++ Q                    T  L  +
Sbjct: 456 GAVSQRHTPGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRLTPV 515

Query: 236 EIVG------ISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQ 283
           ++ G      ++A+     A+  +G ++ WG GF       +  D + P  +      + 
Sbjct: 516 QVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTGVTA 575

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A G NH + L  DG V   G +++G L D        P+     +V  + G   + IAA
Sbjct: 576 IAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPV-----QVPGVTGA--VAIAA 628

Query: 344 GAEHS-AVVTGKFHWVRLFII-----------SYTPFFPPFFINVIA------------E 379
           G  H+ A++     W   + I            ++P       +VIA            +
Sbjct: 629 GGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQGLADVIAIATNNGHTVAVRQ 688

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHP 405
           +  + TWG    GQLG G T  ++ P
Sbjct: 689 DGTVWTWGLNSSGQLGDGTTTQRLTP 714



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 158/382 (41%), Gaps = 63/382 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G     L+P  + +  L+ V+ +A    H++A+        G V++
Sbjct: 492 VWAWGDNARGQLGDGTTTRRLTP--VQVQGLAGVTAVAASDYHLVAVRQD-----GTVWA 544

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  GQLG G  +D   P  V    G    +T I+AG NH+  +   G ++  G   +
Sbjct: 545 WGVGFWGQLGDGTGMDRSTPVQVQGLTG----VTAIAAGSNHTVALRQDGTVWAWGFNNY 600

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G    H +PV+V          IA G  H++ LL+D     V+ +G    GQLG 
Sbjct: 601 GQLGDGTTAGHLTPVQVPGVTGAVA--IAAGGSHTVALLQD---GTVWTWGYNIWGQLGD 655

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SDVNCP 272
                R    P    GL D  ++ I+ N   + A+  +G ++TW  G NS+    D    
Sbjct: 656 GTTTHRHS--PVQVQGLAD--VIAIATNNGHTVAVRQDGTVWTW--GLNSSGQLGDGTTT 709

Query: 273 QSLPS----SLSFSQAAL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           Q L       L+ + A L   +  + +  D  +   G +H G L D        P+    
Sbjct: 710 QRLTPVQVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPV---- 765

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +V  L  + V  +AAG  H A                             ++  + TWG
Sbjct: 766 -QVQGL--MDVTAMAAGGYHMAAA--------------------------GQDGTLWTWG 796

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
              +GQLG G    ++ P  V 
Sbjct: 797 LNSYGQLGGGPLSYRLLPVQVQ 818



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 151/384 (39%), Gaps = 61/384 (15%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG  + GQLG G     L+P  + +  L+  + +    +  +A+    ++     ++
Sbjct: 692  VWTWGLNSSGQLGDGTTTQRLTP--VQVHGLTDATAILTSSSQTVAMRQDRTL-----WA 744

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG    GQLG G     L P  V         +T ++AG  H       G L+T G  ++
Sbjct: 745  WGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGLNSY 800

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G       PV+V    +     IA G  H++ + +D     V+ +GS   GQLG 
Sbjct: 801  GQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQD---GTVWAWGSNFSGQLG- 856

Query: 216  SKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN---- 270
              D   + SL  V + +  + ++  ++A G   AA   +G L+TW  G NS   +     
Sbjct: 857  --DGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTW--GLNSYGQLGGGPL 912

Query: 271  ----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
                 P  +   +  +  A G  H+     DG +   G + +G L          PLS  
Sbjct: 913  SYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG-------PLSYR 965

Query: 327  LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
            L  V     + V  +AAG  H A                             ++  + TW
Sbjct: 966  LLPVQVQGLMSVTAMAAGGYHMAAA--------------------------GQDGTLWTW 999

Query: 387  GWGEHGQLGLGNTCDQIHPKVVNL 410
            G   +GQLG G     + P  V +
Sbjct: 1000 GLNSYGQLGGGPLSQSLTPVQVQV 1023



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 15/139 (10%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GKV 93
             W+WG    GQLG G   D  +P  + +  L+ VS LA G AH +       V+G  G V
Sbjct: 1248 AWTWGFNLWGQLGDGTFTDRATP--VQVQGLTGVSALAAGYAHTV-------VVGEDGTV 1298

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG  S  QLG+G   D   P  V    G       ++AG  H+  +S  G  +  G  
Sbjct: 1299 WAWGNNSGTQLGNGSSTDRSTPVQVEALTGAF----SLAAGRFHTVAMSPDGAGWGWGRN 1354

Query: 154  TFGQLGHGDYRSHSSPVKV 172
              GQ+G G      +PV V
Sbjct: 1355 NLGQVGDGTTADRPTPVNV 1373



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 13/118 (11%)

Query: 4    PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
            P+  +   G SAL       +   E+      VW+WG  +  QLG G   D  +P  + +
Sbjct: 1270 PVQVQGLTGVSALAAGYAHTVVVGEDG----TVWAWGNNSGTQLGNGSSTDRSTP--VQV 1323

Query: 64   SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
             +L+    LA G  H +A+ SP     G  + WGR + GQ+G G   D   P PV   
Sbjct: 1324 EALTGAFSLAAGRFHTVAM-SPD----GAGWGWGRNNLGQVGDGTTAD--RPTPVNVM 1374


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 179/415 (43%), Gaps = 76/415 (18%)

Query: 48  GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
           G+G   D   P+ L  + L  V  +ACG  H   +T       G+VFSWG    G+LGHG
Sbjct: 286 GSGVQMDSFVPKALESAVLLDVQAIACGRQHAALVTK-----QGEVFSWGEELGGRLGHG 340

Query: 108 EMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYR 164
              D  +PK   F DG + + +  ++ G  HS  V+ SG L+  G     FG LG G   
Sbjct: 341 VDSDVSHPK---FVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEA 397

Query: 165 SHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
           +   P K+   +   +V  ++CG  H+ V+       Q++ FG G  G LG   DRI SV
Sbjct: 398 TQWVPRKLDGPLEGIHVSSVSCGPWHTAVVTS---AGQLFTFGDGTFGVLG-HGDRI-SV 452

Query: 224 SLPQVTIGL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---- 266
           S+P+    L             H   +V I   G  +++  + G L+TWG G        
Sbjct: 453 SIPREVESLKGLRTMRAACGVWHTAAVVEIMV-GSSNSSNCSSGKLFTWGDGDKCRLGHG 511

Query: 267 -SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
             +     +  ++L   +F Q A G +    LT  G+V  +G   +G L +P+      P
Sbjct: 512 DKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQ-ADGMLP 570

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
             V  + + N     V ++A GA H AV+T +                            
Sbjct: 571 TRVEGKLMKNF----VEELACGAYHVAVLTSRTE-------------------------- 600

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
           + TWG G +G+LG G+  D+  P VV        +D Q++ + CG+ FT AI  H
Sbjct: 601 VYTWGKGANGRLGHGDADDRNSPSVVEAL-----KDKQVKGIVCGTSFTAAICLH 650



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 142/323 (43%), Gaps = 31/323 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG G   D   P+ ++     +V ++ACG  H  A+T     + G ++
Sbjct: 325 EVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVT-----LSGDLY 379

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
            WG  +   G LG G       P+     DG      ++ +S G  H+  V+ +G LFT 
Sbjct: 380 IWGGNAYNFGLLGCGSEATQWVPRK---LDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDGTFG LGHGD  S S P +V S       + ACG+ H+  +++  +G+         +
Sbjct: 437 GDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGK 496

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
           ++ +G G + +LG      R V  P     L +     ++     +AAL+  G +YT   
Sbjct: 497 LFTWGDGDKCRLGHGDKEARLV--PTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGS 554

Query: 259 --WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
             +G+  N  +D   P  +   L      + A G  HV VLT   EV   G   +G L  
Sbjct: 555 PVYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGH 614

Query: 314 PERVSSTRPLSVALEKVSNLDGV 336
            +      P  V   K   + G+
Sbjct: 615 GDADDRNSPSVVEALKDKQVKGI 637



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 14/173 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G   +LG G     L P  +      +   +ACG +   ALT+      G+V+
Sbjct: 496 KLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAALTT-----TGQVY 550

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D + P   T  +G   +  +  ++ G  H   ++    ++T G 
Sbjct: 551 TMGSPVYGQLGNPQ-ADGMLP---TRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGK 606

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           G  G+LGHGD    +SP  V +  +K V  I CG   +  +   CL   V G 
Sbjct: 607 GANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAI---CLHKWVSGI 656


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 134/287 (46%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +  R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEEDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 5   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 63

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 64  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 118

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 119 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 175

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 176 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 235

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 236 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 264

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 265 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 323



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 161/390 (41%), Gaps = 56/390 (14%)

Query: 32  QVVKVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           ++  +  WG  + GQ G  T        PQ+    S  SV  +ACGG H + L       
Sbjct: 1   KIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----- 55

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
            G+V++ G  + GQLGH    +   P+ +    D H   I H++ G +HS  +SD G LF
Sbjct: 56  DGEVYTCGLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLF 110

Query: 149 TCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           + G G+ GQLG      S + P  +     + + Q++CG  H L L  D    Q + +G 
Sbjct: 111 SWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGK 167

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
              GQLG+ K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       
Sbjct: 168 NSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 226

Query: 262 GFNSTSDVN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G +   D    C   L  +      + G  H  VLT  G V   G    G L        
Sbjct: 227 GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 286

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P      +V  L G +V QIA G +H+              +++ P            
Sbjct: 287 VNP-----RRVLELMGSEVTQIACGRQHT--------------LAFVP-----------S 316

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           +  I  +G G  GQLG G+TC+   P  V 
Sbjct: 317 SGLIYAFGCGARGQLGTGHTCNVKCPSPVK 346


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 174/411 (42%), Gaps = 86/411 (20%)

Query: 9    TEKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDE 55
             E G++ L+    P   +    QQVV              V + G G+ G+LG G   D 
Sbjct: 1136 AEAGRNILVPTTAPSFSQA---QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD- 1191

Query: 56   LSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
                L  L+ +S++        + +CG   H +ALT       G+VFSWG G  G+LGHG
Sbjct: 1192 ----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHG 1242

Query: 108  EMVDALYPKPVTFFDG---------------------HRYTITHISAGWNHSGFVSDSGC 146
                   P+ +    G                     H +    +S G+ HS  V+  G 
Sbjct: 1243 NSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGK 1302

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ---IACGMRHSLVLLKDCLGNQVY 203
            LFT G+G +G+LG G+  +   P +V++     + Q   +ACG+ H+LV+  D  G  V+
Sbjct: 1303 LFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGLNHTLVVSAD--GMMVW 1360

Query: 204  GFGSGKRGQLGV------SKDRIRSVSLPQVTIG-------LHDIEIVGISANGDRSAAL 250
             FG G  G+LG+      S  ++ +V L   T+        L  I I  ++     S AL
Sbjct: 1361 AFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKKVACGTQFSVAL 1420

Query: 251  SAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLM 302
            + +G ++T+G+        +   + N PQ LP  S +     A+G  H L L+  G+V  
Sbjct: 1421 TKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYA 1480

Query: 303  LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
             G +  G L          P  V +     L G  + Q++AG  HSA  T 
Sbjct: 1481 WGSNSEGQLGLGHTNHVREPTVVTM-----LQGKHIHQVSAGRCHSAAWTA 1526



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 147/350 (42%), Gaps = 75/350 (21%)

Query: 89   IGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
            +GGK  VF WG G  GQL      + L P     F   +  +     G N +  +  +G 
Sbjct: 1118 LGGKCDVFLWGAGRHGQLAEAGR-NILVPTTAPSFSQAQQVV----CGQNCTFVIQPNGT 1172

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGNQVY 203
            +  CG+G++G+LG G+         +S+     V Q+  +CG   HS+ L +     +V+
Sbjct: 1173 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SGEVF 1229

Query: 204  GFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
             +G G  G+LG  + DR R    P+    L   E+V +                   GRG
Sbjct: 1230 SWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQV-------------------GRG 1267

Query: 263  FNSTSDV-NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
              + + +  C   L   L   Q + G+ H  V+T DG++   G   +G L      +   
Sbjct: 1268 RAAGAGLCRCRSHLHLRL---QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 1324

Query: 322  PLSVALEKVSNLDGVKVIQIA---AGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            P     E+V+ L+G ++ Q+A    G  H+ VV+                         A
Sbjct: 1325 P-----ERVAALEGYQIGQVANVACGLNHTLVVS-------------------------A 1354

Query: 379  ENRAIMTWGWGEHGQLGLGNTCDQIHPKV--VNLGDEFQNRDTQLEVFCG 426
            +   +  +G G++G+LGLGN+  +  P+V  V L      ++ +++V CG
Sbjct: 1355 DGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCG 1404



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 9/145 (6%)

Query: 290  HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            H + LT  GEV   G   +G L         RP      ++  L G +V+Q+  G    A
Sbjct: 1218 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQVGRGRAAGA 1272

Query: 350  VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             +      + L +     F       V+  +  + T+G G++G+LGLGNT ++  P+ V 
Sbjct: 1273 GLCRCRSHLHLRLQMSCGFK---HSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVA 1329

Query: 410  LGDEFQNRDTQLEVFCGSGFTYAIS 434
              + +Q       V CG   T  +S
Sbjct: 1330 ALEGYQIGQVA-NVACGLNHTLVVS 1353


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH  AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALS-----MSGNI 212

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G    R + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386

Query: 274 SLPS 277
           ++P+
Sbjct: 387 TIPT 390



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)

Query: 53  HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
           +D  S + L   S+     +  + CG  H LAL+      GG++F+WG+   GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
                 P+ V    G    +  ISAG  HS  +S SG +++ G    GQLG G   S   
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDD 233

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
           P  +    N+ V  +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R   + 
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
           ++ +G    +I          A +S  G ++++G G +       T D   P  LP  +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            S+     +H    T + E++M+ G +  +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL   L   +    A G 
Sbjct: 194 AQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  V
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342

Query: 409 NL 410
            +
Sbjct: 343 KV 344


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 134/287 (46%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +  R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEEDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 165/377 (43%), Gaps = 53/377 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WGA + GQLG G     L+   ++ S+   V  +A GG+H LA+ S  +     ++
Sbjct: 57  SVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHALAVLSDKT-----LW 111

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGR   GQLG G    +  P  V    G    +   ++ +N +  +SD G + T G   
Sbjct: 112 AWGRNGDGQLGVGSTTSSFSPVKVPGRTGVE-VVAMAASTFNSAAVLSD-GKVLTWGYNA 169

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG+G     SSPV+VS+    ++  ++ G  H L L     G  V+ +G    GQLG
Sbjct: 170 YGQLGNGSTTDQSSPVEVSAL--SDIKGVSVGKYHMLALRS---GGTVWAWGFNGSGQLG 224

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           +        + PQ    L    +  +SA    S AL  +G ++ WG+      G  S +D
Sbjct: 225 LGSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSFTD 282

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +P      + A G  H L L  DG V   G +  G L D   +S + P+     
Sbjct: 283 RPSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPV----- 337

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  L G  V+ +AAG  HS                         + V+++ R + TWG 
Sbjct: 338 QVPGLTG--VVSVAAGDGHS-------------------------VAVLSDGR-VYTWGR 369

Query: 389 GEHGQLGLGNTCDQIHP 405
              GQLG G+     HP
Sbjct: 370 NSAGQLGDGSQDALPHP 386



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 186/496 (37%), Gaps = 119/496 (23%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G      SP  + +  L+ V  +A G  H +A+ S      G+V++
Sbjct: 314 VWAWGFNGSGQLGDGTTLSRSSP--VQVPGLTGVVSVAAGDGHSVAVLSD-----GRVYT 366

Query: 96  WGRGSSGQLGHGEMVDALYPKP----VTFFDG-HRYT----------------------- 127
           WGR S+GQLG G      +P P    + F  G HR                         
Sbjct: 367 WGRNSAGQLGDGSQDALPHPTPGQALLPFVCGNHRLEPEEQCDDGNSINGDGCSALCLAE 426

Query: 128 ---------ITHISAGWNHSGFVSDSGCLFTC------------------GDGTF----- 155
                    I   +   +    V+  GC F C                   DG       
Sbjct: 427 SGSSLCGDGIKAAAEACDDGNLVNGDGCSFVCRLETPRLVAGAKFTLFQKNDGKLWAWGH 486

Query: 156 ---GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG     +  +PV VS+    +V  +A G  HSL L  D    +++ +GS    Q
Sbjct: 487 NFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSD---GKLWSWGSNSLSQ 543

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSDVNC 271
           LGVS+D + S + P +  G+  +  V        S  + + G +  WG  G+    D   
Sbjct: 544 LGVSRDTLGSRASPALVSGVSGVVAVAAGET--HSLVVLSNGKVSAWGYNGYGQIGDGCS 601

Query: 272 P--------QSLPSSL-SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           P         + P++L S    A G NH L L  DG V   G ++ G L D   V  TRP
Sbjct: 602 PVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRP 661

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHWV-----------RLFIISYTPFFP 370
           + VA          +V+ + AG  HS A+ +    W              +     P   
Sbjct: 662 VQVARLN-------RVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQV 714

Query: 371 PFFINVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNR 417
           P    V+A             +  +  WG+  +GQ+G G+    I+ P  V +   F ++
Sbjct: 715 PGLSGVVAVAAGGRHSLALRADGTVWAWGYNSNGQIGDGSDASIIYRPSPVKV--LFSSQ 772

Query: 418 DTQLEVFCGSGFTYAI 433
           D  + V  G   + A+
Sbjct: 773 DVVMGVAAGDTHSVAV 788



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 162/390 (41%), Gaps = 61/390 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+W+WG    GQLG     + L+P  ++ +SL+ V  +A GG H LAL S      GK++
Sbjct: 480 KLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSD-----GKLW 534

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG  S  QLG     D L  +           +  ++AG  HS  V  +G +   G   
Sbjct: 535 SWGSNSLSQLGVSR--DTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNG 592

Query: 155 FGQLGHG----DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           +GQ+G G         SSP + ++  +  +  +A G  HSL L  D     V+ +G    
Sbjct: 593 YGQIGDGCSPVPTFYCSSPTEPTNLFS--ILGVAAGQNHSLALRSD---GTVWAWGRNNS 647

Query: 211 GQLGVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTS 267
           GQLG     DR R V + ++        +V + A    S AL ++G ++ WG  G     
Sbjct: 648 GQLGDGSLVDRTRPVQVARLN------RVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLG 701

Query: 268 DVN-----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST-R 321
           D        P  +P        A G  H L L  DG V   G + +G + D    S   R
Sbjct: 702 DGTYFGQMLPVQVPGLSGVVAVAAGGRHSLALRADGTVWAWGYNSNGQIGDGSDASIIYR 761

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P  V +   S+ D   V+ +AAG  HS                         + V++  R
Sbjct: 762 PSPVKV-LFSSQD--VVMGVAAGDTHS-------------------------VAVLSGGR 793

Query: 382 AIMTWGWGEHGQLGLG-NTCDQIHPKVVNL 410
            + TWG  + GQLG   N  D+  P  V L
Sbjct: 794 -VRTWGQNDSGQLGYATNNTDRSTPGEVTL 822



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 130/325 (40%), Gaps = 54/325 (16%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++WG  S GQLG G     L   PV F +G    +  ++AG +H+  V     L+  
Sbjct: 56  GSVWTWGANSGGQLGDGTTAYRLASAPVDFSNG--MVVKRVAAGGSHALAVLSDKTLWAW 113

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLG G   S  SPVKV       V  +A    +S  +L D    +V  +G    
Sbjct: 114 GRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNSAAVLSD---GKVLTWGYNAY 170

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
           GQLG         S P     L DI+  G+S       AL + G ++ W  GFN      
Sbjct: 171 GQLG--NGSTTDQSSPVEVSALSDIK--GVSVGKYHMLALRSGGTVWAW--GFNGSGQLG 224

Query: 265 ----STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
               S +  N PQ        +  + G +H L L  DG V   G ++ G L       + 
Sbjct: 225 LGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSF--TD 282

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
           RP  V + +++      V+++AA         G+FH + L +                 +
Sbjct: 283 RPSPVQVPRLTG-----VVEVAA---------GQFHALALRL-----------------D 311

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHP 405
             +  WG+   GQLG G T  +  P
Sbjct: 312 GTVWAWGFNGSGQLGDGTTLSRSSP 336



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 31/153 (20%)

Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
           L   +AA G  + L+   DG V   G +  G L D      T    +A   V   +G+ V
Sbjct: 37  LETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGD-----GTTAYRLASAPVDFSNGMVV 91

Query: 339 IQIAAGAEHS-AVVTGKFHWV-------RLFIISYTPFFPP------------------F 372
            ++AAG  H+ AV++ K  W        +L + S T  F P                  F
Sbjct: 92  KRVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTF 151

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
               +  +  ++TWG+  +GQLG G+T DQ  P
Sbjct: 152 NSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSP 184


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 155/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      +  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S     + Q+ACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S P V   L  I    I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QI  G +H+                 T F P         +  I ++G
Sbjct: 286 RKVFELMGSLVTQITCGRQHT-----------------TAFVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G T ++  P  V 
Sbjct: 321 LGGNGQLGTGTTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 58/331 (17%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  I  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--IRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   ++   P  V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L +I+IV ++     S ALS    +++WG+        G
Sbjct: 114 GQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
           +      N P  + S L   F+Q A G  H  VLT  G +   G +  G L    D +R 
Sbjct: 173 YEYKKQ-NSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T         + +L   KV+ I  G +H+A +T                         
Sbjct: 232 VPTL--------LKSLRTQKVVHICCGEDHTAALT------------------------- 258

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 -KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +      P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKARKR--PEHVGALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG     + +   P          I  ++ G+ HS  +S    +F+ G   +
Sbjct: 108 WGLATDGQLGLPGTEECIR-VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKY 166

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G +Y+  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQLG
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL---TLSGAIFGWGRNKFGQLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           ++ D  R V  P +   L   ++V I    D +AAL+ EG ++T+G G
Sbjct: 224 LNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAG 269



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     + SP ++        + +A GGAH   LT     + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  + HI  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK--VVHICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QI CG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SLS + ++  ACG  H LAL+      G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPR--NIKSLSEIQIVQVACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E      P  +    G  +    I+AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S   + V  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
 gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
          Length = 418

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 179/429 (41%), Gaps = 79/429 (18%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNL---SSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           WG G  G+LG G L    SP +       +    + LACGGAH L LT       G+VF+
Sbjct: 35  WGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQS-----GRVFA 89

Query: 96  WGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            G    GQLG G  V   L P  V+   G    +  +SAG +HS  V+  G LF  G  +
Sbjct: 90  TGLNDFGQLGVGSSVTHTLEPVEVS---GFHERVVEVSAGNHHSCAVTADGKLFVWGRNS 146

Query: 155 FGQ--LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            GQ  LG G  +  S+P KV    +  +  +A G  HS+ + ++    +V  +G+   G+
Sbjct: 147 GGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEE---GEVLSWGAAGSGR 203

Query: 213 LGVSKD-RIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----R 261
           LG  +   I   SL      P++      I+I  I+A    SA +  +G L+ +G    +
Sbjct: 204 LGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEK 263

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSS 319
           GF  +++   P  +       + A G  H  V+T  G++   G + +G   L   + V S
Sbjct: 264 GFGRSNEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCS 323

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
              L  +L K      + V +++ G +H+AV++G                          
Sbjct: 324 PEILKSSLFK------LPVSKVSCGWKHTAVISGD------------------------- 352

Query: 380 NRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
              I TWGWG              GQLG GN  D   P +V  G   +     + V CG 
Sbjct: 353 --DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGKNAR----AVHVSCGF 406

Query: 428 GFTYAISRH 436
             T AI  +
Sbjct: 407 NHTGAIYEY 415


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 166/366 (45%), Gaps = 56/366 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS---PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +V S G+    QLG      E+S   P+ +       +  + CG  H +ALT       G
Sbjct: 71  RVLSCGSNDHDQLG-----QEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTE-----AG 120

Query: 92  KVFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +V+ WG  S GQLG+GE  ++ L P+ V       +T+  I+ G NH   + ++G L+  
Sbjct: 121 QVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAP--FTVVQIACGSNHCLALLNNGALYAW 178

Query: 151 GDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           GD   GQLG G        PV+V++ +   + QIACG  HS+VL K  +   ++ +GS +
Sbjct: 179 GDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGV---IFVWGSNR 235

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
            GQLG+S ++ R  + P +   L    +  I+A G  SAAL+A G ++T+G  F  + +V
Sbjct: 236 FGQLGLSDNKDR--AFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEV 293

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
               SL  + S  Q+AL      ++  + E        +G L    +     P+     K
Sbjct: 294 RI--SLRGTESNPQSALARKLFSLI--EREFCRHSYGSYGQLGHGSKNDQLTPM-----K 344

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           +  L G  + QIA G  H+              + Y P     F           T+G G
Sbjct: 345 IQELMGTTITQIALGRCHT--------------VCYAPTVGKVF-----------TFGLG 379

Query: 390 EHGQLG 395
            +GQLG
Sbjct: 380 GNGQLG 385



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 146/337 (43%), Gaps = 42/337 (12%)

Query: 96  WGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +G  +SG+LG G + D +   P+ +   +G R  +  I+ G +H+  ++  G + +CG  
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIR--VRQIATGAHHTLVLTSHGRVLSCGSN 78

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              QLG     S + P  V++     + Q+ CG +HS+ L +     QVY +GS  +GQL
Sbjct: 79  DHDQLGQE--VSTTKPEPVTALQCLRIVQVCCGQQHSMALTE---AGQVYMWGSNSKGQL 133

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVN 270
           G  + +   +S P+    L    +V I+   +   AL   G LY WG   N       V 
Sbjct: 134 GNGEGQESRLS-PRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVG 192

Query: 271 CPQSLPSS------LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            PQ +P        L  SQ A G NH +VL+  G + + G +  G L   +      P  
Sbjct: 193 EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFP-- 250

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVT---GKF---------HWVRLFI--ISYTP--F 368
             L K      VK   IAAG  HSA +T   G F         H VR+ +      P   
Sbjct: 251 -TLLKTLRQQHVKF--IAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSA 307

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                 ++I   R      +G +GQLG G+  DQ+ P
Sbjct: 308 LARKLFSLI--EREFCRHSYGSYGQLGHGSKNDQLTP 342



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 106/277 (38%), Gaps = 62/277 (22%)

Query: 151 GDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G+   G+LG G    H    P  +       V QIA G  H+LVL       +V   GS 
Sbjct: 22  GNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSH---GRVLSCGSN 78

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
              QLG       S + P+    L  + IV +      S AL+  G +Y WG   NS   
Sbjct: 79  DHDQLGQEV----STTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGS--NSKGQ 132

Query: 269 VNCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS----- 312
           +   +   S LS             Q A G NH L L  +G +   G + +G L      
Sbjct: 133 LGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVG 192

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
           +P+RV           +V+NL G+ + QIA GA HS V                      
Sbjct: 193 EPQRVPV---------EVTNLLGLPLSQIACGANHSMV---------------------- 221

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
               ++++  I  WG    GQLGL +  D+  P ++ 
Sbjct: 222 ----LSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLK 254



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 75/204 (36%), Gaps = 36/204 (17%)

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
           N   GFG+   G+LG+       V +P+    L  I +  I+     +  L++ G + + 
Sbjct: 16  NWTLGFGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSC 75

Query: 260 GR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           G       G   ++    P +    L   Q   G  H + LT  G+V M G +  G L +
Sbjct: 76  GSNDHDQLGQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGN 135

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
            E   S     ++   V  L    V+QIA G+ H                          
Sbjct: 136 GEGQES----RLSPRFVKTLAPFTVVQIACGSNHCL------------------------ 167

Query: 374 INVIAENRAIMTWGWGEHGQLGLG 397
              +  N A+  WG   +GQLG+G
Sbjct: 168 --ALLNNGALYAWGDNGNGQLGIG 189


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 152/340 (44%), Gaps = 48/340 (14%)

Query: 28  EEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
           + + Q VK    +W WG    GQLG G   D  +P  + +   S  + L+ G  H LA+ 
Sbjct: 482 QYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAP--VQVGGDSDWTSLSVGREHTLAVK 539

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           +      G ++ WG+  +GQLG G+  D   P+ V    G       +SAG  ++  V D
Sbjct: 540 AD-----GTLWGWGQNYNGQLGLGDTDDRKTPERV----GSDSDWATVSAGTGYTLAVKD 590

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
            G L+  G  + GQLG GD  +  +PV+V+S  + +   ++ G RH+L +  D     ++
Sbjct: 591 DGTLWAWGRNSHGQLGLGDTNNRDAPVQVAS--DNDWAAVSAGSRHTLAVKND---GTLW 645

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
            +G    GQLG+     R V  P+  +G  D +   +S     + A+  +G L+ WGR  
Sbjct: 646 AWGRNSDGQLGLGDTDNRDV--PE-QVG-SDTDWAAVSTGSGHTLAVKTDGTLWAWGRNS 701

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G   T + + P+ +     ++    GW H L +  DG +   G + +G L      
Sbjct: 702 DGQLGLGDTDERHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLG----- 756

Query: 318 SSTRPLSVALEKVSNLDGVKV-IQIAAGAEHSAVVTGKFH 356
                       + + DG    +Q+ + ++ + V  G++H
Sbjct: 757 ------------LGDTDGRHAPMQVGSDSDWATVAAGRYH 784



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 173/421 (41%), Gaps = 49/421 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG    GQLG G   D  +P+   + S S    ++ G  H LAL +      G +++
Sbjct: 194 LWAWGENYFGQLGLGDTDDRHAPE--QVGSDSDWVAVSAGRHHTLALKAD-----GTLWA 246

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR   GQLG G   +   P+ V    G       +  G  HS  V + G L++ G    
Sbjct: 247 WGRNYFGQLGLGGTTNRNAPEQV----GSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNV 302

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG GD      P +V +  + +   ++ G+ H+L +  D     ++ +G    GQLG+
Sbjct: 303 GQLGLGDTVERRRPEQVGN--DSDWATVSAGLLHTLAVKND---GTLWAWGGNGFGQLGL 357

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                R      V +G  D +   ++A    S A+  +G L++WG       G   T D 
Sbjct: 358 GDTDNRDAP---VQVG-SDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDR 413

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           + P+ +   + ++    G  H L +  DG +   G +  G L     V  T PL    E 
Sbjct: 414 HAPEQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTEA 473

Query: 330 VSNLDGVKVIQI-AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI-------------- 374
                     Q  A  A+ S    G+ H  +L +        P  +              
Sbjct: 474 DWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDSDWTSLSVGRE 533

Query: 375 NVIAENRAIMTWGWGE--HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
           + +A       WGWG+  +GQLGLG+T D+  P+ V    ++        V  G+G+T A
Sbjct: 534 HTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWAT------VSAGTGYTLA 587

Query: 433 I 433
           +
Sbjct: 588 V 588



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 57/354 (16%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
           ++  +LA GG H LA+ +      G +++WG+ + GQLG G+      P  V    G   
Sbjct: 123 TAFPVLAAGGVHTLAMKAD-----GTLWAWGQNNVGQLGLGDTEKRDTPAQV----GSDT 173

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
               +SAG  ++  V D G L+  G+  FGQLG GD     +P +V S  + +   ++ G
Sbjct: 174 DWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGS--DSDWVAVSAG 231

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
             H+L L  D     ++ +G    GQLG+     R+   P+  +G H  +  G+      
Sbjct: 232 RHHTLALKAD---GTLWAWGRNYFGQLGLGGTTNRNA--PE-QVGSHS-DWAGVIGGDRH 284

Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
           S A+  +G L++WG+      G   T +   P+ + +   ++  + G  H L +  DG +
Sbjct: 285 SLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTL 344

Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRL 360
              GG+  G L               L    N D    +Q+ +  + +A+  G+      
Sbjct: 345 WAWGGNGFGQL--------------GLGDTDNRD--APVQVGSDNDWAALNAGQ------ 382

Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                       +   +  + ++ +WGW + G+LGLG+T D+  P+ V  G E+
Sbjct: 383 -----------RYSLAVKNDGSLWSWGWNDFGELGLGDTDDRHAPEQVGGGMEW 425



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 154/380 (40%), Gaps = 61/380 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +WSWG    G+LG G   D  +P+   +      + +  G  H L + +      G + +
Sbjct: 394 LWSWGWNDFGELGLGDTDDRHAPE--QVGGGMEWAAVTAGMYHTLGVKAD-----GTLRA 446

Query: 96  WGRGSSGQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WGR   G+LG G MV    P + VT  D         SAG   +  V   G L+  G   
Sbjct: 447 WGRNDFGELGLGVMVYITSPLQTVTEAD-----WAAASAGQYQTQAVKADGSLWGWGRNH 501

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG GD     +PV+V    + +   ++ G  H+L +  D     ++G+G    GQLG
Sbjct: 502 SGQLGLGDTDDRHAPVQVGG--DSDWTSLSVGREHTLAVKADGT---LWGWGQNYNGQLG 556

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
           +     R    P+  +G  D +   +SA    + A+  +G L+ WGR      G   T++
Sbjct: 557 LGDTDDRKT--PE-RVG-SDSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNN 612

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
            + P  + S   ++  + G  H L +  DG +   G +  G L               L 
Sbjct: 613 RDAPVQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQL--------------GLG 658

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
              N D  +  Q+ +  + +AV TG  H                    +  +  +  WG 
Sbjct: 659 DTDNRDVPE--QVGSDTDWAAVSTGSGH-----------------TLAVKTDGTLWAWGR 699

Query: 389 GEHGQLGLGNTCDQIHPKVV 408
              GQLGLG+T ++  P+ V
Sbjct: 700 NSDGQLGLGDTDERHAPEQV 719



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 11/129 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG  +DGQLG G   +  +P+   +   S  + +  G  H LA+ +      G ++ 
Sbjct: 694 LWAWGRNSDGQLGLGDTDERHAPE--QVGGDSDWAAVTAGWQHTLAIKND-----GTLWG 746

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G+      P  V    G       ++AG  H+  V D G L   G   F
Sbjct: 747 WGLNLYGQLGLGDTDGRHAPMQV----GSDSDWATVAAGRYHTLAVKDDGTLRAWGRNRF 802

Query: 156 GQLGHGDYR 164
           GQLG   YR
Sbjct: 803 GQLGQRTYR 811


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 155/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      +  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S     + Q+ACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S P V   L  I    I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QI  G +H+                 T F P         +  I ++G
Sbjct: 286 RKVFELMGSLVTQITCGRQHT-----------------TAFVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G T ++  P  V 
Sbjct: 321 LGGNGQLGTGTTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 58/331 (17%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  I  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--IRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   ++   P  V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L +I+IV ++     S ALS    +++WG+        G
Sbjct: 114 GQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
           +      N P  + S L   F+Q A G  H  VLT  G +   G +  G L    D +R 
Sbjct: 173 YEYKKQ-NSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T         + +L   KV+ I  G +H+A +T                         
Sbjct: 232 VPTL--------LKSLRTQKVVHICCGEDHTAALT------------------------- 258

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 -KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +      P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKARKR--PEHVGALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG     + +   P          I  ++ G+ HS  +S    +F+ G   +
Sbjct: 108 WGLATDGQLGLPGTEECIR-VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKY 166

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G +Y+  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQLG
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL---TLSGAIFGWGRNKFGQLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           ++ D  R V  P +   L   ++V I    D +AAL+ EG ++T+G G
Sbjct: 224 LNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAG 269



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     + SP ++        + +A GGAH   LT     + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  + HI  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK--VVHICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QI CG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SLS + ++  ACG  H LAL+      G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPR--NIKSLSEIQIVQVACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E      P  +    G  +    I+AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S   + V  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|426245676|ref|XP_004016632.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Ovis aries]
          Length = 538

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 186/464 (40%), Gaps = 88/464 (18%)

Query: 10  EKGKSALINNAKPKIEEEEEEQQV---VKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSS 65
           ++G+     N  P   E    + V     +++WGA + GQLG G   D LS Q L +   
Sbjct: 62  KRGRPTASRNPSPAWPEPHSLEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCK 121

Query: 66  LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
              +  +  GG H   +T       G +F  G    GQLG G   + LY  P     G  
Sbjct: 122 SGCIKQITGGGGHSAVVTDE-----GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLG-- 174

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             I  ++ GW+ +  ++++G + +CG  +FGQLG           +    + + V  IA 
Sbjct: 175 CAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPRGPRRCVIPQAIELLREKVVSIAA 234

Query: 186 GMRHSLVLLKDCLGNQVYGFG-----SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
           G+RH+L          V+ +G     SG+R   G +     +   P    GL + + V +
Sbjct: 235 GLRHALAATAS---GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV 291

Query: 241 SANGDRSAALSAEGHLYTWGRG-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHV 291
            A  D SA+L+  G LY WG        +  + +  PQ + +    ++  AA+  GW H+
Sbjct: 292 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEAHCFQNEKIAAVWSGWTHL 351

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG--------------VK 337
           +  T  G+V   G + +G L    R   TR    + ++  +L G                
Sbjct: 352 VAQTVTGKVFTWGRADYGQLG---RTVETREGWQSEKQDPSLPGSGPQKGTPSCLPCLTG 408

Query: 338 VIQIAAGAEHS-AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
             +I+ G+EH+ AV+ G  H                            +WGW EHG  G 
Sbjct: 409 ATEISCGSEHNLAVIRGVCH----------------------------SWGWNEHGMCGD 440

Query: 397 GNTCDQIHPKVV-----NLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G   D   PK V     +LG         L V CG+G + A+ +
Sbjct: 441 GTEADVWAPKPVPGLPSSLG---------LHVGCGAGHSLALCQ 475


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 852  GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 904

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
              HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 905  GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 964

Query: 193  LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 965  LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 1019

Query: 253  EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
             G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 1020 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1079

Query: 305  GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 1080 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 1118



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 864  EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 918

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 919  TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 978

Query: 155  FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 979  YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 1035

Query: 215  V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 1036 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1079



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           P+L+       +  +ACG +H  ALTS      G++++WG G  G+LGHG+    L PK 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTS-----SGELYTWGLGEYGRLGHGDNTTQLKPKM 60

Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
           V    GHR       +    +  ++D G +F+ GDG FG+LG G     + P  +     
Sbjct: 61  VKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG 120

Query: 178 KNVHQIACGMRHSLVLLKDCL--GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
           + V QI CG + SL L K  +    QVY +G    GQ G     +     P +  GL   
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQ 178

Query: 236 EIVGISANGDRSAA 249
           +I  ++     S A
Sbjct: 179 KITRVACGSSHSVA 192



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 7/157 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 971  VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 1025

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 1026 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 1083

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            GQLG G   +   P  V++   K V+++ACG  H+L 
Sbjct: 1084 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 757  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 814

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
            G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 815  GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 871

Query: 209  KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 872  EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 928

Query: 264  -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 929  GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 988

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
                P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 989  GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 1043

Query: 370  PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
             P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 1044 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 1103

Query: 411  GDEFQNRDTQLEVFCGSGFTYAIS 434
              +  NR     V CGS  T A S
Sbjct: 1104 QGKKVNR-----VACGSAHTLAWS 1122



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 14/165 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
           ++++WG G  G+LG G    +L P+++ +     V  +ACG   A  LALT       G 
Sbjct: 35  ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE-----GL 89

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT--- 149
           VFSWG G  G+LG G       P+ +   +G    +  I  G   S  ++ SG ++T   
Sbjct: 90  VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ--GVCQIECGAQFSLALTKSGVVWTWQV 147

Query: 150 --CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
              GD   GQ G+G    +  P  V     + + ++ACG  HS+ 
Sbjct: 148 YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 192



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 20/183 (10%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           I  I+ G +HS  ++ SG L+T G G +G+LGHGD  +   P  V   +   V Q+ACG 
Sbjct: 17  IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 76

Query: 188 R--HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
           R   +L L  + L   V+ +G G  G+LG  +      ++PQ    L+   +  I     
Sbjct: 77  RDAQTLALTDEGL---VFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQ 131

Query: 246 RSAALSAEGHLYTW----------GRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVL 292
            S AL+  G ++TW          G+  N T+ VN   +L   L     ++ A G +H +
Sbjct: 132 FSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 191

Query: 293 VLT 295
             T
Sbjct: 192 AWT 194



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 1074 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 1132


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G V
Sbjct: 157 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 212 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D LG +V+ FGSGK GQL
Sbjct: 270 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 327

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G      + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 328 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 385

Query: 274 SLPS 277
           ++P+
Sbjct: 386 TIPT 389



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 28/254 (11%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHR 125
             +  + CG  H LAL+      GG++F+WG+   GQLG G +      P+ V    G  
Sbjct: 137 KKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG-- 189

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG  HS  +S SG +++ G   FGQLG G   S  SP  + +  N+ V  +AC
Sbjct: 190 VPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLAC 249

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  HS +L +D L   ++ FG+GK GQLG   +++ +R   + ++ +G    +I      
Sbjct: 250 GGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA--CGR 303

Query: 244 GDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
               A +S  G ++++G G +       T D   P  LP  +S S+     +H    T +
Sbjct: 304 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TSE 357

Query: 298 GEVLMLGGSHHGML 311
            E++M+ G +  +L
Sbjct: 358 KELIMIAGGNQSIL 371



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 107/242 (44%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  + +
Sbjct: 137 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 192

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL  +L   +    A G 
Sbjct: 193 AQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGG 251

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 306

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  V
Sbjct: 307 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341

Query: 409 NL 410
            +
Sbjct: 342 KV 343



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 86/232 (37%), Gaps = 45/232 (19%)

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
            QI C  R   VL +   G QV+   +G  G              P+      +++I  +
Sbjct: 54  RQICCSPRRLAVLERGGAGVQVHQVLAGSGG-----------ARTPKCIKLGKNMKIHSV 102

Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
               D    LS++G  + +             +S+       Q   G  H L L+  GE+
Sbjct: 103 DQGADHMLILSSDGKPFEYDYSMKHLRS----ESILQEKKIIQITCGDYHSLALSKGGEL 158

Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRL 360
              G + HG L     V    P +   + V +L GV + QI+AG  HS  ++        
Sbjct: 159 FAWGQNLHGQLG----VGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-------- 206

Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                           ++ N  + +WG  E GQLGLG+T  +  P ++   D
Sbjct: 207 ----------------MSGN--VYSWGKNEFGQLGLGHTESKDSPSLIEALD 240


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 179/417 (42%), Gaps = 106/417 (25%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG G   D   P+ ++     +V ++ACG     A+T     + G ++
Sbjct: 291 EVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLSCAVT-----LSGDLY 345

Query: 95  SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            WG  +   G LG G       P+ ++   +G    ++ +S G  H+  V+ +G LFT G
Sbjct: 346 IWGGNAYNFGLLGCGSEATQWVPRKLSGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFG 403

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
           DGTFG LGHGD  S S+P +V S       ++ACG+ H+  +++  +G+         ++
Sbjct: 404 DGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKL 463

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G G +G+LG                            +GD+ A L            
Sbjct: 464 FTWGDGDKGRLG----------------------------HGDKEARL------------ 483

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
                    P  + + +  SF Q A G +  + LT  G+V  +G   +G L +P+     
Sbjct: 484 --------VPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQ-ADGK 534

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V  + + N     V ++A GA H AV+T +                          
Sbjct: 535 VPTRVEGKLMKNF----VEELACGAYHVAVLTSRTE------------------------ 566

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
             + TWG G +G+LG G+T D+  P +V        +D Q++ + CG+ FT AI  H
Sbjct: 567 --VYTWGKGANGRLGHGDTDDRNFPSIVE-----ALKDKQVKGIICGTSFTAAICLH 616



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 14/173 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG G  G+LG G     L P  +      S   +ACG +  +ALT+      G+V+
Sbjct: 462 KLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVALTT-----SGQVY 516

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    GQLG+ +  D   P   T  +G   +  +  ++ G  H   ++    ++T G 
Sbjct: 517 TMGSPVYGQLGNPQ-ADGKVP---TRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGK 572

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           G  G+LGHGD    + P  V +  +K V  I CG   +  +   CL   V G 
Sbjct: 573 GANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAI---CLHKWVSGI 622


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 156/385 (40%), Gaps = 61/385 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW WG    GQLG G   D  +P  + +S L S V+ +A GGAH  ALTS      G V
Sbjct: 80  EVWCWGYNWSGQLGDGSYTDRSTP--VAVSGLPSGVTAIAAGGAHTCALTSS-----GGV 132

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
             WG    GQLG G   D   P  V+   G    +T I+AG  H+  +  SG ++  G  
Sbjct: 133 MCWGGNYFGQLGDGSYTDRSTPVAVS---GLPSGVTAIAAGGAHTCALMSSGGVWCWGYN 189

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G    H +PV VS   ++ V  IA G  H+  L        V+ +G    GQL
Sbjct: 190 LSGQLGDGSTIYHITPVAVSGLPSE-VTAIAAGYAHTCALTGS---GGVWCWGDNGFGQL 245

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------FN 264
           G         S P    GL    +  I+A G  + AL++ G ++ WGR          F 
Sbjct: 246 G--DGSFTDSSTPAAVGGLPS-GVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFT 302

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           + S       LPS +  +  A G  H   LT  G V   GG+  G L D      + P  
Sbjct: 303 NRSTPGAVGGLPSGV--TAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTP-- 358

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
                VS L    V  IAAG  H+   T                           +  + 
Sbjct: 359 ---GAVSGLP-SGVTAIAAGGAHTCART--------------------------SSGGVW 388

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVN 409
            WG   +GQLG G T D+  P  V+
Sbjct: 389 CWGGNFYGQLGDGTTTDRSTPGAVS 413



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 147/329 (44%), Gaps = 35/329 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    GQLG G   +  +P  +  S L S V+ +A G  H  ALTS      G V+
Sbjct: 438 VWCWGDNFYGQLGDGTTTNRSTPGAV--SGLPSGVTAIAAGNYHTCALTSS-----GGVW 490

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WGR  SGQLG G   +   P  V    G    +T I+AG  H+  +  SG ++  G   
Sbjct: 491 CWGRNDSGQLGDGTTTNRSTPGAV---GGLPSGVTAIAAGDYHTCALMSSGGVWCWGLNN 547

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G Y   S+PV V       V  IA G  H+  L      + V+ +G+   GQLG
Sbjct: 548 RGQLGDGSYTDSSTPVAVGGL-PSGVMAIAAGNYHTCALTGS---DGVWCWGTNSDGQLG 603

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 RS   P    GL    +  I+A    + AL++ G ++ WG       G  +T++
Sbjct: 604 DGTTTNRST--PVAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTN 660

Query: 269 VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            + P +   LPS +  +  A G  H   LTG G V   G +++G L D    + + P   
Sbjct: 661 RSTPGAVSGLPSGV--TAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTP--- 715

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
               VS L    V  IAAG  H+  +TG 
Sbjct: 716 --GAVSGLP-SGVTAIAAGVYHTCALTGS 741



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 172/409 (42%), Gaps = 60/409 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    GQLG G   D  +P  +  S L S V+ +A GGAH  A TS      G V+
Sbjct: 336 VWCWGGNDSGQLGDGSYTDRSTPGAV--SGLPSGVTAIAAGGAHTCARTSS-----GGVW 388

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG    GQLG G   D   P  V+   G    +T I+AG  H+  ++ S  ++  GD  
Sbjct: 389 CWGGNFYGQLGDGTTTDRSTPGAVS---GLPSGVTAIAAGNYHTCALTGSDGVWCWGDNF 445

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G   + S+P  VS      V  IA G  H+  L        V+ +G    GQLG
Sbjct: 446 YGQLGDGTTTNRSTPGAVSGL-PSGVTAIAAGNYHTCALTSS---GGVWCWGRNDSGQLG 501

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
                 RS   P    GL    +  I+A    + AL + G ++ WG       G  S +D
Sbjct: 502 DGTTTNRST--PGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTD 558

Query: 269 VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            + P +   LPS +     A G  H   LTG   V   G +  G L D    + + P++ 
Sbjct: 559 SSTPVAVGGLPSGV--MAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVA- 615

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH-WVRLFIIS-----------YTPFFP--- 370
               VS L    V  IAAG  H+  +T     W   + +S            TP      
Sbjct: 616 ----VSGLP-SGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGL 670

Query: 371 PFFINVIA---ENRAIMT-----WGWGE--HGQLGLGNTCDQIHPKVVN 409
           P  +  IA   E+   +T     W WG+  +GQLG G T ++  P  V+
Sbjct: 671 PSGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVS 719



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 131/299 (43%), Gaps = 27/299 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG    GQLG G   +  +P  +     S V+ +A G  H  AL S      G V+ 
Sbjct: 489 VWCWGRNDSGQLGDGTTTNRSTPGAVG-GLPSGVTAIAAGDYHTCALMSS-----GGVWC 542

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G   D+  P  V    G    +  I+AG  H+  ++ S  ++  G  + 
Sbjct: 543 WGLNNRGQLGDGSYTDSSTPVAV---GGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSD 599

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   + S+PV VS      V  IA G  H+  L        V+ +G    GQLG 
Sbjct: 600 GQLGDGTTTNRSTPVAVSGL-PSGVTAIAAGNYHTCALTSS---GGVWCWGYNLSGQLGD 655

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDV 269
                RS   P    GL    +  I+A  + + AL+  G ++ WG  +       +T++ 
Sbjct: 656 GTTTNRST--PGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNR 712

Query: 270 NCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           + P +   LPS ++   A +   H   LTG G V+  G +  G L D   +  T P+ V
Sbjct: 713 STPGAVSGLPSGVTAIAAGV--YHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 769



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 95/195 (48%), Gaps = 15/195 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG  +DGQLG G   +  +P  + +S L S V+ +A G  H  ALTS      G V+
Sbjct: 591 VWCWGTNSDGQLGDGTTTNRSTP--VAVSGLPSGVTAIAAGNYHTCALTSS-----GGVW 643

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG   SGQLG G   +   P  V+   G    +T I+AG  H+  ++ SG ++  GD  
Sbjct: 644 CWGYNLSGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGDEHTCALTGSGGVWCWGDNY 700

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G   + S+P  VS      V  IA G+ H+  L        V  +G+   GQLG
Sbjct: 701 YGQLGDGTTTNRSTPGAVSGL-PSGVTAIAAGVYHTCALTGS---GGVMCWGNNGDGQLG 756

Query: 215 VSKDRIRSVSLPQVT 229
             +   R+  +  VT
Sbjct: 757 DGRPLYRTTPVDVVT 771



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 69/147 (46%), Gaps = 11/147 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    GQLG G   +  +P  +  S L S V+ +A G  H  ALT       G V+
Sbjct: 642 VWCWGYNLSGQLGDGTTTNRSTPGAV--SGLPSGVTAIAAGDEHTCALTGS-----GGVW 694

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG    GQLG G   +   P  V+   G    +T I+AG  H+  ++ SG +   G+  
Sbjct: 695 CWGDNYYGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGVYHTCALTGSGGVMCWGNNG 751

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVH 181
            GQLG G     ++PV V +  +  V+
Sbjct: 752 DGQLGDGRPLYRTTPVDVVTSASWGVY 778


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G +HS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGDHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADEHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-ESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L     L   KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKL-----LRAQKVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGDHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADEH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRAQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADEHIVHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     +++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEESV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +  R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEEDRES--PCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 11/226 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G  T GQLG G   D  +P+++ +  LSSV  +A G +++L++T       G V+S
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEV--LSSVVQIAAGPSYILSVTE-----NGTVYS 289

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G++  LGHGE  D L P+P+  F      I  +SAG  H+  +  +G ++T G G  
Sbjct: 290 FGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYC 349

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LGHGD    ++P  ++S  N+   Q+    R + VL+       VYGFGS   G LG 
Sbjct: 350 GALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNS---GSVYGFGSMGFGSLGF 406

Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              R+    L P++   L    +  IS     +  +++ G ++ +G
Sbjct: 407 LDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFG 452



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 128/346 (36%), Gaps = 79/346 (22%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY-TITH 130
           +  G  H L +++ S      V+S G G  G LG G   +       T  D      + H
Sbjct: 116 ITTGKYHTLLISNSS------VYSCGSGLCGVLGQGS--ETTQCVAFTRIDSPPLPRVVH 167

Query: 131 ISAGWNHSGFVSDSGCLFTCGD-------------------------------------- 152
           +SA +NH+ FV  SG +FTCGD                                      
Sbjct: 168 VSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNF 227

Query: 153 ---------------GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
                           T GQLGHGD +   +P  +   V  +V QIA G  + L + ++ 
Sbjct: 228 TVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTEN- 284

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
               VY FGSG    LG  +        P        I IV +SA  + + AL + G +Y
Sbjct: 285 --GTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVY 342

Query: 258 TWGRGF------NSTSDVNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           TWG+G+          +   P+   SL + L+  Q         VL   G V   G    
Sbjct: 343 TWGKGYCGALGHGDEIEKTTPELLTSLKNQLAV-QVCARKRKTFVLVNSGSVYGFGSMGF 401

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           G L   +R  S + L   +  +  L    V QI+ G  H+ V+T +
Sbjct: 402 GSLGFLDRRVSDKVLKPRI--LDTLRAHHVSQISTGLYHTVVITSR 445



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 22/255 (8%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++ G  + GQLGHG+  D   PK +        ++  I+AG ++   V+++G +++ 
Sbjct: 235 GHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS----SVVQIAAGPSYILSVTENGTVYSF 290

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G G    LGHG+      P  +  F  K +H  +++ G  H++ L  +     VY +G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGF---VYTWGKG 347

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNS-- 265
             G LG   D I   + P++   L +   V + A   ++  L   G +Y +G  GF S  
Sbjct: 348 YCGALG-HGDEIEKTT-PELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLG 405

Query: 266 ------TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                 +  V  P+ L +  +   SQ + G  H +V+T  G++   G +    L      
Sbjct: 406 FLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLR 465

Query: 318 SSTRPLSVALEKVSN 332
           S   P  + ++  S 
Sbjct: 466 SCLEPTQIFIKDTSE 480



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 126/314 (40%), Gaps = 46/314 (14%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMR 188
            I+ G  H+  +S+S  +++CG G  G LG G   +   +  ++ S     V  ++    
Sbjct: 115 QITTGKYHTLLISNSS-VYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFN 173

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           H+  +++     +V+  G       G  +D  R +  P++   L  I    ++A  + + 
Sbjct: 174 HAAFVMQS---GEVFTCGDNSSSCCG-HRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTV 229

Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
            L+ +GH+YT G       G   T D   P+ +    S  Q A G +++L +T +G V  
Sbjct: 230 FLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSVVQIAAGPSYILSVTENGTVYS 289

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
            G   +  L   E+    +P  +   +     G+ +++++AG EH+              
Sbjct: 290 FGSGANFCLGHGEQHDELQPRPI---QKFRRKGIHIVRVSAGDEHAV------------- 333

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-----NLGDEFQNR 417
                         +  N  + TWG G  G LG G+  ++  P+++      L  +   R
Sbjct: 334 -------------ALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCAR 380

Query: 418 DTQLEVFCGSGFTY 431
             +  V   SG  Y
Sbjct: 381 KRKTFVLVNSGSVY 394



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 60/192 (31%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGKV 93
           V+S+G+G +  LG G  HDEL P+ +       + ++  + G  H +AL S      G V
Sbjct: 287 VYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDS-----NGFV 341

Query: 94  FSWGRGSSGQLGHGEMVDALYP-------------------------------------- 115
           ++WG+G  G LGHG+ ++   P                                      
Sbjct: 342 YTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGF 401

Query: 116 ---------------KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
                          KP        + ++ IS G  H+  ++  G +F  GD    QLGH
Sbjct: 402 GSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGH 461

Query: 161 GDYRSHSSPVKV 172
              RS   P ++
Sbjct: 462 DTLRSCLEPTQI 473


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 157/359 (43%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  VNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDQ---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWGR  NS   +  
Sbjct: 115 QLGLMTIE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGR--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q   G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 121/247 (48%), Gaps = 21/247 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWGAG+DGQLG   + D ++ P+L+   +  ++  ++CG  H LAL +      G+ 
Sbjct: 104 QLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQF 158

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WGR S GQLG G E      P+ V   +G    +  + AG  HS  +S SG +F  G 
Sbjct: 159 FTWGRNSHGQLGLGKEFPSQASPQRVRSLEG--IPLAQVVAGGAHSFALSLSGAVFGWGM 216

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG  D +   SP  V     + V  I+CG  H+ VL K      V+ FG+G  GQ
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQ 273

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFNS------ 265
           LG   D +     P+  + L   E+  I+     + A + + G +Y +G G         
Sbjct: 274 LG--HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGH 331

Query: 266 TSDVNCP 272
           T +V CP
Sbjct: 332 TCNVKCP 338



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 150/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGVNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGRNSHGQLGLGKE-FPSQASPQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  + A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGVNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSDQ-----GQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG   + D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTIEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+  G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S ++ R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +  WG  S GQ G    +  +  +P V  F   R ++  ++ G NHS F+ + G ++TCG
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLGH   R  + P ++ +  ++++  +ACG  HSL L       Q++ +G+G  G
Sbjct: 60  LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +  
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171

Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            +  PS  S            +Q A G  H   L+  G V   G ++ G L   +     
Sbjct: 172 GKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V L +       KV+ I+ G EH+AV+T                          ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
             + T+G G  GQLG  +  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 150/362 (41%), Gaps = 54/362 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +   P+ 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77

Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
           +    D H   I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +   
Sbjct: 78  IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             + + Q++CG  H L L  D    Q + +G    GQLG+ K+     S PQ    L  I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKEYPSQAS-PQRVRSLEGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
            +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H  VLT  G V   G    G L          P      +V  L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
           +              +++ P            +  I  +G G  GQLG G+TC+   P  
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGAKGQLGTGHTCNVKCPSP 340

Query: 408 VN 409
           V 
Sbjct: 341 VK 342



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+ +  + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G +GQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGAKGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 134/287 (46%), Gaps = 23/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++ G  T GQLG  R  ++  P+ +   +   +  +ACG +H LAL+       G++F
Sbjct: 54  EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIVHVACGESHSLALSD-----RGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG GS GQLG     D++   P      ++ TI  +S G  H   ++  G  FT G  +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G +Y S +SP +V S     + Q+A G  HS  L    L   V+G+G    GQL
Sbjct: 166 HGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+S +  R    P     L   ++V IS   + +A L+  G ++T+G       G +S +
Sbjct: 223 GLSDEEDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
           D   P+ +   +    +Q A G  H L      G +   G    G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQL 327



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 324 KGQLGTG----HTCNVKCPSPVK 342


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 362

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 363 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 422

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 423 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 479

Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 480 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 523



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 296 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 348

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
             HS  V+ +G L+T G G +G+LGH D      P  V +     V  +ACG     +L 
Sbjct: 349 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 408

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 409 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 463

Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 464 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 523

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 524 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 562



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 415 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 469

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 470 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 527

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 528 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 563



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR--PVQLIGGEQTLFAVTADGKLYAT 258

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
           G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 259 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 315

Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
           + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 316 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 372

Query: 264 -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 373 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 432

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
               P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 433 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 487

Query: 370 PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
            P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 488 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 547

Query: 411 GDEFQNRDTQLEVFCGSGFTYAIS 434
             +  NR     V CGS  T A S
Sbjct: 548 QGKKVNR-----VACGSAHTLAWS 566



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 518 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 576


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 169/414 (40%), Gaps = 67/414 (16%)

Query: 36   VWSWGAGTDGQLGTGRLH--DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            V++WG    G+LG G      +L P+ +       V  + CGG H LA T       G V
Sbjct: 896  VYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTE-----SGSV 950

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            + WG G  GQLG G+      P P+      +  +T ++AG+ H+  V  SG +   G G
Sbjct: 951  YGWGNGRIGQLGLGDRTLHWLPVPIKTL--RKMHVTQLAAGYAHTIVVLKSGEVMVFGGG 1008

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
              GQLG G  +    P K+ +    ++ Q ACG  H+ +L +     +VY  GS   GQL
Sbjct: 1009 EVGQLGTGMRKDLLVPTKLQAM--PSIVQAACGYCHTALLTE---AGEVYTCGSAMSGQL 1063

Query: 214  GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
            G + +       P++  GL+   I  I+     + A++   ++YTWG    + SD    Q
Sbjct: 1064 GHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQ 1123

Query: 274  SLPSSL---------------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV- 317
               +++                 S  + G  H +  T DGEV +   S  G L  P  + 
Sbjct: 1124 ERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVW--SSTGSLQPPLLLR 1181

Query: 318  ---------SSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
                     ++  PL V A+    +     V++ AA  E                     
Sbjct: 1182 GSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEE-------------------- 1221

Query: 368  FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                 F  V+ EN  + +WG G  GQLGLG+  D+     V   +E + R  +L
Sbjct: 1222 -----FTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVAKSEESRRRSVRL 1270



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 28/247 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V  +G G  GQLGTG   D L P    L ++ S+   ACG  H   LT       G+V+
Sbjct: 1001 EVMVFGGGEVGQLGTGMRKDLLVPT--KLQAMPSIVQAACGYCHTALLTE-----AGEVY 1053

Query: 95   SWGRGSSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG- 151
            + G   SGQLGH + +  D L PK V   +G R  I  I+ G  H+  ++D   ++T G 
Sbjct: 1054 TCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKR--IRFIACGSFHTIAITDLDNVYTWGG 1111

Query: 152  ------DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD--------- 196
                  DG   Q          +P  V   + K +  ++CG  HS+    D         
Sbjct: 1112 VQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSST 1171

Query: 197  -CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
              L   +   GSG     G ++  +   ++P          +   +A  + +  ++  G 
Sbjct: 1172 GSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGL 1231

Query: 256  LYTWGRG 262
            LY+WG G
Sbjct: 1232 LYSWGSG 1238


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 115 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 167

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
             HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 227

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 228 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 282

Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 283 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 342

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 343 DNDEGQLGDGTTNAIQRPRLVAA-----LQGKKVNRVACGSAHT 381



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA-----GDLY 181

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 182 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 241

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS---GAVYTWGKGDYHRLG 298

Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 299 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 342



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 7/157 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 234 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS-----GAVYT 288

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 346

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
           GQLG G   +   P  V++   K V+++ACG  H+L 
Sbjct: 347 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 154/383 (40%), Gaps = 56/383 (14%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 20  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR--PVQLIGGEQTLFAVTADGKLYAT 77

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
           G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 78  GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 134

Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
           + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 135 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 191

Query: 264 -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 192 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 251

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
               P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 252 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 306

Query: 370 PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
            P  +       VIA            E+  + TWG  + GQLG G T     P++V   
Sbjct: 307 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA-- 364

Query: 412 DEFQNRDTQLEVFCGSGFTYAIS 434
              Q +     V CGS  T A S
Sbjct: 365 -ALQGKKVN-RVACGSAHTLAWS 385


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 155/382 (40%), Gaps = 54/382 (14%)

Query: 39  WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E  L P+  +      +  + CG  H + +        G V++ 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G  H+  ++D G ++  G  T G
Sbjct: 59  GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114

Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  G       P  + S     + Q+ACG  HSL L K   G++V+ +G  K GQLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             +  +  S P V   L  I    I+A G  S  L+  G ++ WGR      G N  +D 
Sbjct: 172 GYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  +        G +H   LT +G V   G   +G L          P     
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            KV  L G  V QI  G +H+                 T F P         +  I ++G
Sbjct: 286 RKVFELMGSLVTQITCGRQHT-----------------TAFVP--------SSGRIYSFG 320

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
            G +GQLG G T ++  P  V 
Sbjct: 321 LGGNGQLGTGTTSNRKSPFTVK 342



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 58/331 (17%)

Query: 93  VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + +   L P+   FF   R  I  +  G  H+ FV D G ++TC
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--IRDVGCGLRHTVFVLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   ++   P  V +   +N+  ++CG  H+L L       QVY +G    
Sbjct: 59  GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+       + +P+    L +I+IV ++     S ALS    +++WG+        G
Sbjct: 114 GQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172

Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
           +      N P  + S L   F+Q A G  H  VLT  G +   G +  G L    D +R 
Sbjct: 173 YEYKKQ-NSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
             T         + +L   KV+ I  G +H+A +T                         
Sbjct: 232 VPTL--------LKSLRTQKVVHICCGEDHTAALT------------------------- 258

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   + T+G G +GQLG  +T  +I+P+ V
Sbjct: 259 -KEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +      P+ +      ++  ++CG AH LAL        G+V++
Sbjct: 55  VYTCGCNDLGQLGHEKARKR--PEHVGALDAQNIVAVSCGEAHTLALND-----KGQVYA 107

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG     + +   P          I  ++ G+ HS  +S    +F+ G   +
Sbjct: 108 WGLATDGQLGLPGTEECIR-VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKY 166

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G +Y+  +SP  + S +     QIA G  HS VL    L   ++G+G  K GQLG
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL---TLSGAIFGWGRNKFGQLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           ++ D  R V  P +   L   ++V I    D +AAL+ EG ++T+G G
Sbjct: 224 LNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAG 269



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     + SP ++        + +A GGAH   LT     + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WGR   GQLG  +  D   P  +      +  + HI  G +H+  ++  G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK--VVHICCGEDHTAALTKEGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH       +P KV   +   V QI CG +H+   +      ++Y FG G  GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327

Query: 214 G 214
           G
Sbjct: 328 G 328



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           +V++WG  TDGQLG     + +  P+  N+ SLS + ++  ACG  H LAL+      G 
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPR--NIKSLSEIQIVQVACGYYHSLALSK-----GS 156

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +VFSWG+   GQLG G E      P  +    G  +    I+AG  HS  ++ SG +F  
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D      P  + S   + V  I CG  H+  L K+     V+ FG+G  
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275


>gi|115470737|ref|NP_001058967.1| Os07g0165200 [Oryza sativa Japonica Group]
 gi|113610503|dbj|BAF20881.1| Os07g0165200, partial [Oryza sativa Japonica Group]
          Length = 754

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 165/370 (44%), Gaps = 44/370 (11%)

Query: 3   APLMEETEKGKSA--LINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL 60
           A L  E  KG++   L++    +   +  +   ++V+SWG+GT+ QLGTG  H +  P  
Sbjct: 119 ASLALEDTKGRTPVDLLSGPVSQANGDSPDSVAMEVFSWGSGTNYQLGTGNAHIQKLPCK 178

Query: 61  LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH-----GEMVDALYP 115
           ++    S +  +A    H +A++S      G++++WG G  G+LGH     G+    + P
Sbjct: 179 VDALHGSYIKTVAASKFHSVAVSS-----DGELYTWGFGRGGRLGHPDIHSGQTTAVITP 233

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
           + VT   G R  +  ++A  +H+   +++G LFT G    GQLG+    +  +P +VSS 
Sbjct: 234 RQVTVGLG-RKRVNVVAAAKHHTVIATEAGELFTWGSNREGQLGYPSVDTQPTPRRVSSL 292

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
               +  +A   +HS  +       +V+ +GS K GQLG       S  +P++   L   
Sbjct: 293 -KARIISVAAANKHSAAVADT---GEVFTWGSNKEGQLGYGTSNSASNCIPRMVEYLKGK 348

Query: 236 EIVGISANGDRSAALSAEGHLYTWG------------RGFNSTSDVNCPQSLPSSLSFSQ 283
               +SA    + AL  +G ++TWG            R      + N        L    
Sbjct: 349 AFKCVSAAKYHTVALGTDGEVFTWGHRLVTPRRAVISRCLKKGGNTNLKFHRMERLQVIS 408

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A G  H  VLT DG +       + + SDP+         +   ++ ++ G  V+ I+A
Sbjct: 409 VAAGVMHTTVLTADGAIF------YWVSSDPD---------LRCRQIFSMCGRNVVNISA 453

Query: 344 GAEHSAVVTG 353
           G   +A+ T 
Sbjct: 454 GKYWTALATA 463



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 50/230 (21%)

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D +  +V+ +GSG   QLG     I+   LP     LH   I  ++A+   S A+S++G 
Sbjct: 148 DSVAMEVFSWGSGTNYQLGTGNAHIQK--LPCKVDALHGSYIKTVAASKFHSVAVSSDGE 205

Query: 256 LYTWGRGFN-----------STSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
           LYTWG G              T+ V  P+ +   L   +    A   +H ++ T  GE+ 
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAGELF 265

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G +  G L  P   +   P      +VS+L   ++I +AA  +HSA V          
Sbjct: 266 TWGSNREGQLGYPSVDTQPTP-----RRVSSLKA-RIISVAAANKHSAAV---------- 309

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                           A+   + TWG  + GQLG G  N+     P++V 
Sbjct: 310 ----------------ADTGEVFTWGSNKEGQLGYGTSNSASNCIPRMVE 343


>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
 gi|194695574|gb|ACF81871.1| unknown [Zea mays]
 gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 418

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 177/425 (41%), Gaps = 77/425 (18%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNL---SSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           WG G  G+LG G L    SP +       +    + LACGGAH L LT       G+VF+
Sbjct: 33  WGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQ-----NGRVFA 87

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            G    GQLG G  V  +  +PV    G    +  +SAG +HS  V+  G LF  G  + 
Sbjct: 88  TGLNDFGQLGIGTSVTHML-EPVE-ISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSG 145

Query: 156 GQ--LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           GQ  LG G  +  S+P KV    +  V  +A G  HS+ + ++    +V  +G+   G+L
Sbjct: 146 GQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEE---GEVLSWGAAGSGRL 202

Query: 214 GVSKD-RIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RG 262
           G  +   I   SL      P++      I+I  I+A    SA +  +G L+ +G    +G
Sbjct: 203 GHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEKG 262

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSST 320
           F   ++   P  +       + A G  H  V+T  G++   G + +G   L   + V S 
Sbjct: 263 FGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSP 322

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
             L  +L K      + V +++ G +H+AVV+G                           
Sbjct: 323 EILKSSLFK------LPVSKVSCGWKHTAVVSGD-------------------------- 350

Query: 381 RAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
             I TWGWG              GQLG GN  D   P +V  G   +     + V CG  
Sbjct: 351 -DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGTNAR----AVHVSCGFN 405

Query: 429 FTYAI 433
            T AI
Sbjct: 406 HTGAI 410


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 148/361 (40%), Gaps = 52/361 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           PQ+    S  SV  +ACGG H + L        G+V++ G  + GQLGH    +    KP
Sbjct: 72  PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHEREGN----KP 122

Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFV 176
                     I H++ G +HS  +SD G LF+ G G+ GQLG      S + P  +    
Sbjct: 123 EQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN 182

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ    L  I 
Sbjct: 183 QQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGIP 238

Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALGW 288
           +  ++A G  S ALS  G ++ WG       G +   D    C   L  +      + G 
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 298

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            H  VLT  G V   G    G L          P      +V  L G +V QIA G +H+
Sbjct: 299 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQHT 353

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                         +++ P            +  I  +G G  GQLG G+TC+   P  V
Sbjct: 354 --------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSPV 388

Query: 409 N 409
            
Sbjct: 389 K 389



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 163/377 (43%), Gaps = 63/377 (16%)

Query: 80  LALTSPSSVIGGKVFSWGRGSSGQLGHGE-----MVDALYPKP-VTFFDGHRYTITHISA 133
             L S  SV+  K    G+ +   LG  +      +  +  +P V  F   R ++  ++ 
Sbjct: 30  FVLISKMSVLNSKEKDIGKENGNDLGASQPGISTNLRGIVAEPQVCGFISDR-SVKEVAC 88

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G NHS F+ + G ++TCG  T GQLGH   R  + P ++ +  ++N+  +ACG  HSL L
Sbjct: 89  GGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQNIVHVACGESHSLAL 146

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
                  Q++ +G+G  GQLG+      SV++P++   L+   I+ +S       AL+A+
Sbjct: 147 SDR---GQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 202

Query: 254 GHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLM 302
           G  +TWG+  NS   +   +  PS  S            +Q A G  H   L+  G V  
Sbjct: 203 GQFFTWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFA 260

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
            G ++ G L   +      P  V L +       KV+ I+ G EH+AV+T          
Sbjct: 261 WGMNNAGQLGLSDEEDRESPCHVKLLRTQ-----KVVYISCGEEHTAVLT---------- 305

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN---- 416
                           ++  + T+G G  GQLG  +  D+++P+ V   +G E       
Sbjct: 306 ----------------KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACG 349

Query: 417 RDTQLEVFCGSGFTYAI 433
           R   L     SG  YA 
Sbjct: 350 RQHTLAFVPSSGLIYAF 366



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 204 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 258

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 259 FAWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 316

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 317 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 374

Query: 214 G 214
           G
Sbjct: 375 G 375



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 120/247 (48%), Gaps = 21/247 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWGAG+DGQLG     D ++ P+L+   +  ++  ++CG  H LAL +      G+ 
Sbjct: 151 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQF 205

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG+ S GQLG G E      P+ V   +G    +  ++AG  HS  +S SG +F  G 
Sbjct: 206 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEG--IPLAQVAAGGAHSFALSLSGAVFAWGM 263

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG  D     SP  V     + V  I+CG  H+ VL K      V+ FG+G  GQ
Sbjct: 264 NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQ 320

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFNS------ 265
           LG   D +     P+  + L   E+  I+     + A + + G +Y +G G         
Sbjct: 321 LG--HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGH 378

Query: 266 TSDVNCP 272
           T +V CP
Sbjct: 379 TCNVKCP 385



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 258 VFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 312

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 313 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 370

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 371 RGQLGTG----HTCNVKCPSPVK 389


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 128/276 (46%), Gaps = 28/276 (10%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ +GRG  GQLG G   D   P+ V         + +++AG  H+  V+  G L+  G
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSR--DVVNLAAGALHTAAVTSDGELYVMG 58

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
                QLG        +P +V++     V ++ACG  H+L ++    G  V  FGS + G
Sbjct: 59  SNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVD---GGAVAAFGSAEYG 115

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--------WGRGF 263
           Q+G+     R V LP+V   L  + IV ++A G  + ALS+ G +++         GRG 
Sbjct: 116 QVGLGPCGAR-VELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGT 174

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-------SDPER 316
              +DV  P S    L   Q A G NH   +T DG VL  G   H +L        D E 
Sbjct: 175 TEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN 234

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            S+ +P       V  L G+   Q++ G +H+ ++T
Sbjct: 235 CSTPKP-------VQALKGIVGRQVSCGDDHTVLLT 263



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 28/285 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +VW +G G  GQLG G   D   P+L+       V  LA G  H  A+TS      G+++
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSD-----GELY 55

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
             G     QLG  +  DAL P  VT  +  ++ +  ++ G  H+  V D G +   G   
Sbjct: 56  VMGSNEESQLGVRQRSDALAPTRVTALE--QFQVQRVACGPAHTLAVVDGGAVAAFGSAE 113

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQ+G G   +    P  V    + ++ ++A G  H+L L        V+  G+G  G L
Sbjct: 114 YGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSST---GGVFSCGNGSFGAL 170

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------- 262
           G  +       +P+    L  + +V I+   + SAA++A+G + TWGRG           
Sbjct: 171 G--RGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCG 228

Query: 263 ---FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
              F + S     Q+L   +   Q + G +H ++LT DG V   G
Sbjct: 229 HGDFENCSTPKPVQAL-KGIVGRQVSCGDDHTVLLTEDGSVYAWG 272


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 318 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 370

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
             HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 371 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 430

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 431 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 485

Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 486 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 545

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 546 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 584



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 384

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 385 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 444

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 445 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 501

Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 502 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 545



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 437 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 491

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 492 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 549

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 550 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 585



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 154/383 (40%), Gaps = 56/383 (14%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 280

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
           G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 281 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 337

Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
           + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 338 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 394

Query: 264 -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 395 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 454

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
               P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 455 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 509

Query: 370 PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
            P  +       VIA            E+  + TWG  + GQLG G T     P++V   
Sbjct: 510 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA-- 567

Query: 412 DEFQNRDTQLEVFCGSGFTYAIS 434
              Q +     V CGS  T A S
Sbjct: 568 -ALQGKKVN-RVACGSAHTLAWS 588



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 540 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 598


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 161/419 (38%), Gaps = 112/419 (26%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG       L P+++   + + V  +A G  H  AL      I G++F
Sbjct: 223 EVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCAL-----AISGELF 277

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WG G  S G           YP  + F      ++  ++ G  H+  +S SG LFT GD
Sbjct: 278 EWGEGTHSLGVWDDQCQRSQWYPHKL-FGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           GTFG LGHGD  S + P +V S     V  +ACG  H+  +                   
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI------------------- 377

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSDV 269
                                 +EI+G   +       +  G L+TWG   RG    SD 
Sbjct: 378 ----------------------VEILGTVKSN------APSGKLFTWGDADRGKLGHSDK 409

Query: 270 N------CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-----SDPERVS 318
                  C ++L  S  F+Q +      + LT  G V  +G   HG L      D    S
Sbjct: 410 ESKLVPTCVKALTDS-DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICS 468

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              PL              V +I++G+ H AV+T                          
Sbjct: 469 VEGPLKTEF----------VREISSGSSHVAVLTM------------------------- 493

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            N  + TWG G  GQLGLGN  D+  P +V   +     D Q++ + CGS FT A+  H
Sbjct: 494 -NGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE-----DKQVDSIACGSNFTVAVCLH 546



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 53/273 (19%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL----PQVTIGLHD 234
           +V  ++CG +H+ ++ K     +V+ +G    G+LG        VS+    P++   L  
Sbjct: 204 DVQNVSCGEKHAAIVTKQ---GEVFSWGKEDGGRLG------HKVSVGVLHPKIIESLAF 254

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTS--DVNCPQS--LPSSL-------SFSQ 283
             +  I+     + AL+  G L+ WG G +S    D  C +S   P  L       S  +
Sbjct: 255 THVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVK 314

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A G  H  +++  G++   G    G+L   +  S  RP     ++V +L G++V  +A 
Sbjct: 315 MACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP-----KEVESLKGLRVKAVAC 369

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI 403
           G  H+A +      V+    S  P            +  + TWG  + G+LG  +   ++
Sbjct: 370 GPWHTAAIVEILGTVK----SNAP------------SGKLFTWGDADRGKLGHSDKESKL 413

Query: 404 HPKVVN-LGD-EFQNRDTQLEVFCGSGFTYAIS 434
            P  V  L D +F       +V C    T A++
Sbjct: 414 VPTCVKALTDSDF------AQVSCAKALTVALT 440



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           KV++WG GT+GQLG G   D  SP L+       V  +ACG    +A+    S+ G
Sbjct: 496 KVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 551



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 42/199 (21%)

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSL 275
           +VSLP++      +++  +S     +A ++ +G +++WG+      G   +  V  P+ +
Sbjct: 190 NVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKII 249

Query: 276 PSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHH--GMLSDPERVSSTRPLSVALEKV 330
             SL+F+     A G  H   L   GE+   G   H  G+  D  + S   P  +     
Sbjct: 250 -ESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKL----F 304

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L+GV V+++A G  H+A                          +I+ +  + T+G G 
Sbjct: 305 GPLEGVSVVKMACGQWHTA--------------------------IISSSGQLFTYGDGT 338

Query: 391 HGQLGLGNTCDQIHPKVVN 409
            G LG G+T     PK V 
Sbjct: 339 FGVLGHGDTSSVARPKEVE 357


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 151/334 (45%), Gaps = 44/334 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG    GQL       E+     N       SV  ++ G  H L L        G +
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLK-----DGTL 55

Query: 94  FSWGRGSSGQLGHG------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
            S G+   GQLG        E + +L  +          TI  +S G NHS  + D G +
Sbjct: 56  LSCGQNPYGQLGRKGNNSRIEQISSLEAQ----------TIVDVSCGTNHSVAMCDEGNI 105

Query: 148 FTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           ++ GDG+ GQLG G + S + +P +++  +N+ + QI+CG  HS+ L +D    +V+ +G
Sbjct: 106 YSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAED---GRVFSWG 162

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
             K GQLG+    I   + PQ+   L  I +V ++A G ++ ALS  G ++ WGR     
Sbjct: 163 QNKCGQLGLGSQIINQAT-PQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQ 221

Query: 262 -GFNSTSDVNC--PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
            GF + +      P ++ S   L  +  + G  H  VL  DG V   G   +G L     
Sbjct: 222 LGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSG 281

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
             ++ P  +  E+ S     +V Q+A G  H+ +
Sbjct: 282 NQTSVPQKI--EEYSR----QVSQVACGRYHTLL 309



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 11/195 (5%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G ++ ++ +PQL+       +  +  GG+   AL+     + G V
Sbjct: 157 RVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALS-----MSGTV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WGR ++GQLG          KP          + +IS G  H+  ++  G ++T GD 
Sbjct: 212 FAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDD 271

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           T+GQLG       S P K+  + ++ V Q+ACG  H+L+ +  C  N++  FG G + Q 
Sbjct: 272 TYGQLGQQSGNQTSVPQKIEEY-SRQVSQVACGRYHTLLYVFTC--NRIVSFGKGSQRQQ 328

Query: 214 G--VSKDRIRSVSLP 226
           G   S D+  +  LP
Sbjct: 329 GNDESSDQAEASQLP 343


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 154/342 (45%), Gaps = 29/342 (8%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG    G+LG G   D   P+L+   +L+++  +ACG  H  A+++      G +F
Sbjct: 1101 EVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHTCAVST-----SGDLF 1155

Query: 95   SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +WG G  + G LGHG  +    PK V+   +G    +  ++ G  HS   + +G LFT G
Sbjct: 1156 TWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG--LQVLSVACGTWHSALATANGKLFTFG 1213

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
            DG FG LGHGD  S S P +V         ++ACG+ H++ +++            +++ 
Sbjct: 1214 DGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVMNQTGTSMSSKKLFT 1273

Query: 205  FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
            +G G + +LG       +  LP     L D     I+     + AL+  GH++T      
Sbjct: 1274 WGDGDKNRLGHGNK--ETYLLPTCVSSLIDYNFQQIACGHTLTVALTTSGHVFTMGGTSH 1331

Query: 260  GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
            G+  +S SD   P  +   L      + + G +HV VLT   EV   G   +G L   ++
Sbjct: 1332 GQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDK 1391

Query: 317  VSSTRPLSVALEKVSNLDGVKVIQ--IAAGAEHSAVVTGKFH 356
                 P  V   K  ++  +      + +G   +   T K H
Sbjct: 1392 EDRKTPTLVEALKERHVKSISCADQSVCSGCRQAFGFTRKRH 1433



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 165/391 (42%), Gaps = 69/391 (17%)

Query: 72   LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
            +ACG  H+  +T       G+VF+WG  + G+LGHG  VD   PK V F       I  +
Sbjct: 1086 IACGVRHIALVTR-----QGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFL--ALTNIDFV 1138

Query: 132  SAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMR 188
            + G  H+  VS SG LFT GDG    G LGHG   SH  P +VS  V    V  +ACG  
Sbjct: 1139 ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTW 1198

Query: 189  HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ---VTIGLHDIEI-------V 238
            HS +   +    +++ FG G  G LG   DR  SVS P+   +  GL  +++       V
Sbjct: 1199 HSALATAN---GKLFTFGDGAFGVLG-HGDR-ESVSYPKEVKMLSGLKTMKVACGVWHTV 1253

Query: 239  GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNH 290
             I    +++    +   L+TWG G  +       ++  LP+ +S      F Q A G   
Sbjct: 1254 AIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTL 1313

Query: 291  VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
             + LT  G V  +GG+ HG L      SS     +       L G  V +I+ G  H AV
Sbjct: 1314 TVALTTSGHVFTMGGTSHGQLG-----SSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAV 1368

Query: 351  VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +T +                            + TWG G +G+LG G+  D+  P +V  
Sbjct: 1369 LTSR--------------------------SEVFTWGKGSNGRLGHGDKEDRKTPTLVEA 1402

Query: 411  GDEFQNR-----DTQLEVFCGSGFTYAISRH 436
              E   +     D  +   C   F +   RH
Sbjct: 1403 LKERHVKSISCADQSVCSGCRQAFGFTRKRH 1433



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/357 (21%), Positives = 122/357 (34%), Gaps = 109/357 (30%)

Query: 91   GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            G V+ WG   S  +     V+             R     I+ G  H   V+  G +FT 
Sbjct: 1058 GDVYVWGEVCSDGISQDGTVNC------------RTVKIDIACGVRHIALVTRQGEVFTW 1105

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
            G+   G+LGHG     S P  V      N+  +ACG  H+                    
Sbjct: 1106 GEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHT-------------------- 1145

Query: 211  GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---- 266
                                         +S +GD          L+TWG G ++     
Sbjct: 1146 ---------------------------CAVSTSGD----------LFTWGDGIHNVGLLG 1168

Query: 267  --SDVN--CPQSLP---SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
              SD++   P+ +      L     A G  H  + T +G++   G    G+L   +R S 
Sbjct: 1169 HGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESV 1228

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
            + P  V +     L G+K +++A G  H+  +    +     + S               
Sbjct: 1229 SYPKEVKM-----LSGLKTMKVACGVWHTVAIVEVMNQTGTSMSS--------------- 1268

Query: 380  NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 434
             + + TWG G+  +LG GN    + P  V+  +   FQ      ++ CG   T A++
Sbjct: 1269 -KKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQ------QIACGHTLTVALT 1318


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 161/419 (38%), Gaps = 112/419 (26%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG       L P+++   + + V  +A G  H  AL      I G++F
Sbjct: 288 EVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCAL-----AISGELF 342

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WG G  S G           YP  + F      ++  ++ G  H+  +S SG LFT GD
Sbjct: 343 EWGEGTHSLGVWDDQCQRSQWYPHKL-FGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 401

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           GTFG LGHGD  S + P +V S     V  +ACG  H+  +                   
Sbjct: 402 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI------------------- 442

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSDV 269
                                 +EI+G   +       +  G L+TWG   RG    SD 
Sbjct: 443 ----------------------VEILGTVKSN------APSGKLFTWGDADRGKLGHSDK 474

Query: 270 N------CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-----SDPERVS 318
                  C ++L  S  F+Q +      + LT  G V  +G   HG L      D    S
Sbjct: 475 ESKLVPTCVKALTDS-DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICS 533

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
              PL              V +I++G+ H AV+T                          
Sbjct: 534 VEGPLKTEF----------VREISSGSSHVAVLTM------------------------- 558

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            N  + TWG G  GQLGLGN  D+  P +V   +     D Q++ + CGS FT A+  H
Sbjct: 559 -NGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE-----DKQVDSIACGSNFTVAVCLH 611



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 53/273 (19%)

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL----PQVTIGLHD 234
           +V  ++CG +H+ ++ K     +V+ +G    G+LG        VS+    P++   L  
Sbjct: 269 DVQNVSCGEKHAAIVTKQ---GEVFSWGKEDGGRLG------HKVSVGVLHPKIIESLAF 319

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTS--DVNCPQS--LPSSL-------SFSQ 283
             +  I+     + AL+  G L+ WG G +S    D  C +S   P  L       S  +
Sbjct: 320 THVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVK 379

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
            A G  H  +++  G++   G    G+L   +  S  RP     ++V +L G++V  +A 
Sbjct: 380 MACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP-----KEVESLKGLRVKAVAC 434

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI 403
           G  H+A +      V+    S  P            +  + TWG  + G+LG  +   ++
Sbjct: 435 GPWHTAAIVEILGTVK----SNAP------------SGKLFTWGDADRGKLGHSDKESKL 478

Query: 404 HPKVVN-LGD-EFQNRDTQLEVFCGSGFTYAIS 434
            P  V  L D +F       +V C    T A++
Sbjct: 479 VPTCVKALTDSDF------AQVSCAKALTVALT 505



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           KV++WG GT+GQLG G   D  SP L+       V  +ACG    +A+    S+ G
Sbjct: 561 KVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 616



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 42/199 (21%)

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSL 275
           +VSLP++      +++  +S     +A ++ +G +++WG+      G   +  V  P+ +
Sbjct: 255 NVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKII 314

Query: 276 PSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHH--GMLSDPERVSSTRPLSVALEKV 330
             SL+F+     A G  H   L   GE+   G   H  G+  D  + S   P  +     
Sbjct: 315 -ESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKL----F 369

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L+GV V+++A G  H+A                          +I+ +  + T+G G 
Sbjct: 370 GPLEGVSVVKMACGQWHTA--------------------------IISSSGQLFTYGDGT 403

Query: 391 HGQLGLGNTCDQIHPKVVN 409
            G LG G+T     PK V 
Sbjct: 404 FGVLGHGDTSSVARPKEVE 422


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 14/206 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   S   ++ ++ G AH +AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALS-----MSGNI 212

Query: 94  FSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +SWG+   GQLG  H E  D+  P  +   D  +  +  ++ G +H+  ++  G LFT G
Sbjct: 213 YSWGKNEFGQLGLDHTESKDS--PSLIEALDNQK--VEFLACGGSHTALLTQDGLLFTFG 268

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G  GQLGH   ++   P  V+      V QIACG  H+L  + D LG +V+ FGSGK G
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKEG 326

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEI 237
           QLG    R + + LP       D++ 
Sbjct: 327 QLGNGGTRDQLIPLPMKVSSNEDLKF 352



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 47/254 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  I +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLSGIPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G + T   + P SL  +L   +    A G 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSP-SLIEALDNQKVEFLACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELAGNRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  +
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342

Query: 409 NLGDEFQNRDTQLE 422
            +     N D + E
Sbjct: 343 KVSS---NEDLKFE 353



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 38/296 (12%)

Query: 34  VKVWSWGAGTDGQL-----GTGRLHDELSPQLLNLSSL---SSVSMLACGGAHVLALTSP 85
           +K+ S   G D  L     G    +D  S + L   S+     +  + CG  H LAL+  
Sbjct: 97  MKIHSMDLGADHMLILSSGGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK- 155

Query: 86  SSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
               GG++F+WG+   GQLG G +      P+ V    G    +  ISAG  HS  +S S
Sbjct: 156 ----GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSG--IPLAQISAGEAHSMALSMS 209

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G +++ G   FGQLG     S  SP  + +  N+ V  +ACG  H+ +L +D L   ++ 
Sbjct: 210 GNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGL---LFT 266

Query: 205 FGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGR 261
           FG+GK GQLG   +++ +R    P +   L    +  I+     + A  ++ G ++++G 
Sbjct: 267 FGAGKHGQLGHNSTQNELR----PCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGS 322

Query: 262 GFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G         T D   P  LP  +S ++     +H    T + E++M+ G +  +L
Sbjct: 323 GKEGQLGNGGTRDQLIP--LPMKVSSNEDLKFESH----TSEKELIMIAGENQSIL 372


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 26/213 (12%)

Query: 20  AKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGR-LHDELSPQLLN 62
           A P++ ++  +Q +++V                ++WG  + GQLG G+    + SPQ + 
Sbjct: 8   AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVR 67

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
                 ++ +A GGAH  AL+     + G VF WG  ++GQLG  +  D   P  V    
Sbjct: 68  SLEGIPLAQVAAGGAHSFALS-----LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
             +  + +IS G  H+  ++ SG +FT G G+ GQLGHG      +P +V   +   V Q
Sbjct: 123 TQK--VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQ 180

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           IACG +H+L  +       +Y FG G RGQLG 
Sbjct: 181 IACGRQHTLAFVPS--SGLIYAFGCGARGQLGT 211



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 104/225 (46%), Gaps = 24/225 (10%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
           P+L+   +  ++  ++CG  H LAL +      G+ F+WG+ S GQLG G E      P+
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFFTWGKNSHGQLGLGKEFPSQTSPQ 64

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V   +G    +  ++AG  HS  +S SG +F  G    GQLG  D +   SP  V    
Sbjct: 65  RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHD 234
            + V  I+CG  H+ VL K      V+ FG+G  GQL  G   D +     P+  + L  
Sbjct: 123 TQKVVYISCGEEHTAVLTKS---GGVFTFGAGSCGQLGHGSMNDEVN----PRRVLELMG 175

Query: 235 IEIVGISANGDRSAA-LSAEGHLYTWGRGFNS------TSDVNCP 272
            E+  I+     + A + + G +Y +G G         T +V CP
Sbjct: 176 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 81/197 (41%), Gaps = 38/197 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 93  VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGHG M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 148 FGAGSCGQLGHGSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G    H+  VK  S                           V G+ +   GQL 
Sbjct: 206 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHSGQLS 235

Query: 215 VSKDRIRSVSLPQVTIG 231
              DR +   + Q+  G
Sbjct: 236 ARADRFKYRVVKQIFSG 252



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 107/285 (37%), Gaps = 55/285 (19%)

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
           P  +     + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S + PQ 
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQTSPQR 65

Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLS 280
              L  I +  ++A G  S ALS  G ++ WG       G +   D    C   L  +  
Sbjct: 66  VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 125

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
               + G  H  VLT  G V   G    G L          P      +V  L G +V Q
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNP-----RRVLELMGSEVTQ 180

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
           IA G +H+              +++ P            +  I  +G G  GQLG G+TC
Sbjct: 181 IACGRQHT--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTC 215

Query: 401 DQIHPKVVN------------LGDEFQNRDTQLEVFCGSGFTYAI 433
           +   P  V               D F+ R  + ++F G   T+ +
Sbjct: 216 NVKCPSPVKGYWAAHSGQLSARADRFKYRVVK-QIFSGGDQTFVL 259



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 50/229 (21%)

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS- 280
           SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS   +   +  PS  S 
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGLGKEFPSQTSP 63

Query: 281 ----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
                      +Q A G  H   L+  G V   G ++ G L   +      P  V L + 
Sbjct: 64  QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRT 123

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
                 KV+ I+ G EH+AV+T                          ++  + T+G G 
Sbjct: 124 Q-----KVVYISCGEEHTAVLT--------------------------KSGGVFTFGAGS 152

Query: 391 HGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
            GQLG G+  D+++P+ V   +G E       R   L     SG  YA 
Sbjct: 153 CGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 201


>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
          Length = 1271

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 178/434 (41%), Gaps = 102/434 (23%)

Query: 24  IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
           + + + E+    +W WG     + GT  +   L P+ ++L +   +  +ACGG H+L LT
Sbjct: 457 LNDHQSEEPSSHMWVWGRPPSLEGGTPLV---LRPKQVSLLNGQPIVQVACGGEHLLYLT 513

Query: 84  SPSSVIGGKVFSWGRGSSGQLG------HGEMVDALYPKPVTFFDG-----HRYTITHIS 132
           S      G V+S+G     +        +    D  Y + ++         HR TI  IS
Sbjct: 514 S-----TGDVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAMIS 568

Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
            G  HS  ++D+G L+T G G  G+LGHGD R  + P KV S + ++V   +CG+  +  
Sbjct: 569 CGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVASASCGLGDN-- 626

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
             +D   +Q+ GF  G R                          I  +    + +AAL  
Sbjct: 627 KWRDT-PHQIVGFPQGTR--------------------------ISNVVCGWNFTAALDR 659

Query: 253 EGHLYTWGR--------GFNSTSDV--NCPQSLPSSLSFSQA---ALGWNHVLVLTGDGE 299
           +G+++TWG+        G+     V   C + L    + S A   A G+ H +VLT  GE
Sbjct: 660 QGNIFTWGKTGEGQCGLGYVDKDQVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGE 719

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G   +G L+  +  S                      + A  + + V  G FH + 
Sbjct: 720 LYSWGLGEYGQLARVQLPSDA--------------------LCAPDQLTRVYCGAFHSI- 758

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                              E R +  WG   +G  GLG+T ++  P+ +   D F ++ T
Sbjct: 759 ----------------ATTEKRVMFAWGLNSYGACGLGHTANKDKPERI---DCFSSQ-T 798

Query: 420 QLEVFCGSGFTYAI 433
           +L V CG  +T A+
Sbjct: 799 ELVVACGHKYTIAL 812


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 83  ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 137

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 138 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 195

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D    +V+ FGSGK GQL
Sbjct: 196 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 253

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G      + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 254 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 311

Query: 274 SLPS 277
           ++P+
Sbjct: 312 TIPT 315



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 23/233 (9%)

Query: 88  VIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           V GG++F+WG+   GQLG G +      P+ V    G    +  ISAG  HS  +S SG 
Sbjct: 79  VRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGN 136

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +++ G   FGQLG G   S  SP  + +  N+ V  +ACG  HS +L +D L   ++ FG
Sbjct: 137 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGL---LFTFG 193

Query: 207 SGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
           +GK GQLG   +++ +R   + ++ +G    +I          A +S  G ++++G G +
Sbjct: 194 AGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA--CGRWHTLAYVSDFGKVFSFGSGKD 250

Query: 265 ------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                  T D   P  LP  +S S+     +H    T + E++M+ G +  +L
Sbjct: 251 GQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TSEKELIMIAGGNQSIL 297



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 41/221 (18%)

Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
           G +++ +G    GQLGV + +  S + PQ+   L  + +  ISA    S ALS  G++Y+
Sbjct: 81  GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYS 139

Query: 259 WGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHG 309
           WG+      G   T   + P SL  +L   +    A G +H  +LT DG +   G   HG
Sbjct: 140 WGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 198

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L      +  RP  VA      L G +V QIA G  H+      F              
Sbjct: 199 QLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHTLAYVSDFG------------- 240

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                        + ++G G+ GQLG G T DQ+ P  V +
Sbjct: 241 ------------KVFSFGSGKDGQLGNGGTLDQLIPLPVKV 269


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG   DG+LG G       P+++       V  +A GGAH   +T+      G ++
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 462

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG+G  G+LGH +  D L PK V    GHR       +G   +  ++D   +++ GDG 
Sbjct: 463 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 522

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G+LG G       P+K+ S     V ++ CG + S+ L K      VY +G G   +LG
Sbjct: 523 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 579

Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             S D +R    P+   GL   +++ I+         + +G +YTWG
Sbjct: 580 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 623



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           GG H LAL+S      G+V+SWG    G+LGHG       P+ +    G    +  ++AG
Sbjct: 396 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 448

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
             HS  V+ +G L+T G G +G+LGH D      P  V +     V  IACG     +L 
Sbjct: 449 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 508

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           L  D   + V+ +G G  G+LG  +       +P     L  + +V +      S AL+ 
Sbjct: 509 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 563

Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
            G +YTWG+G        S   V  P+ +           A G  H +  T DGEV   G
Sbjct: 564 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 623

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            +  G L D    +  RP  VA      L G KV ++A G+ H+
Sbjct: 624 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 662



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG G  G+LG G       P  ++  +   V  + CG    +ALT       G V++
Sbjct: 515 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 569

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G   +LGHG       P+ V    G +  +  I+ G  H    ++ G ++T GD   
Sbjct: 570 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 627

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           GQLG G   +   P  V++   K V+++ACG  H+L
Sbjct: 628 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 663



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G ++ WG    GQLG  E      P P       R     +  G      V+  G L+  
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR--PVQLIGGEQTLFAVTADGKLYAT 358

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
           G G  G+LG G   S S+P  + S  +  + ++A   G +H L L  +    +VY +G  
Sbjct: 359 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 415

Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
           + G+LG      RS    P+V   L  IE+V ++A G  SA ++A G LYTWG+G     
Sbjct: 416 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 472

Query: 264 -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            +S S+      L  +L   +        G    L LT D  V   G   +G L      
Sbjct: 473 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 532

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
               P+     K+ +L G+ V+++  G++ S  +T        GK  + RL   S     
Sbjct: 533 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 587

Query: 370 PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
            P  +       VIA            E+  + TWG  + GQLG G T     P++V  L
Sbjct: 588 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 647

Query: 411 GDEFQNRDTQLEVFCGSGFTYAIS 434
             +  NR     V CGS  T A S
Sbjct: 648 QGKKVNR-----VACGSAHTLAWS 666



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG   +GQLG G  +    P+L+       V+ +ACG AH LA ++      GK+
Sbjct: 618 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 676


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 20/251 (7%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V +++ G +H +AL     + G  V SWGRG  GQLGHG+  D L P  ++ FDG    I
Sbjct: 14  VLLISAGASHTVAL-----LTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ--DI 66

Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             ++ G +++   S SG  +++ G G FG+LGHGD      P  + +     + QI+CG 
Sbjct: 67  VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGD 126

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H L +  +   N+V  +G  + G+LG+   +   V  PQ  +    I I  ++A  + S
Sbjct: 127 CHCLAVTME---NKVLSWGRNQNGELGLGTTKDSHV--PQKILAFEGIRIKMVAAGAEHS 181

Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEV 300
            A++ +G LY WG       G   T+D   P+ +          + GW H + ++  G +
Sbjct: 182 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGL 241

Query: 301 LMLGGSHHGML 311
              G S +G L
Sbjct: 242 YTHGWSKYGQL 252



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 16/227 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D L P  L+      +  + CG  + +A +      G  V+S
Sbjct: 33  VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKS----GKDVYS 88

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG+  D   P P+    G R  I  IS G  H   V+    + + G    
Sbjct: 89  WGWGDFGRLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQN 146

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G  +    P K+ +F    +  +A G  HS+ + +D     +YG+G G+ G LG+
Sbjct: 147 GELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED---GDLYGWGWGRYGNLGL 203

Query: 216 --SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             + DR+    +P+  + +   +IV +S     + ++S+ G LYT G
Sbjct: 204 GDTNDRL----IPE-KVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 245



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV SWG   +G+LG G   D   PQ +       + M+A G  H +A+T       G ++
Sbjct: 137 KVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED-----GDLY 191

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V   DG +  I  +S GW H+  +S SG L+T G   
Sbjct: 192 GWGWGRYGNLGLGDTNDRLIPEKVNI-DGDK--IVMVSCGWRHTISISSSGGLYTHGWSK 248

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
           +GQLGHGD+     P KV +  +K + Q+
Sbjct: 249 YGQLGHGDFEDCLVPRKVQALSDKLISQV 277



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 117/263 (44%), Gaps = 54/263 (20%)

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
           I+ G  H++ LL    GN V  +G G+ GQLG   + DR+    LP         +IV +
Sbjct: 17  ISAGASHTVALLT---GNVVCSWGRGEDGQLGHGDTDDRL----LPTKLSAFDGQDIVSV 69

Query: 241 SANGDRSAALSAEGH-LYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHV 291
           +   D + A S  G  +Y+WG       G    SD+  P  + +   L   Q + G  H 
Sbjct: 70  TCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC 129

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           L +T + +VL  G + +G L       S  P     +K+   +G+++  +AAGAEHS  +
Sbjct: 130 LAVTMENKVLSWGRNQNGELGLGTTKDSHVP-----QKILAFEGIRIKMVAAGAEHSVAI 184

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
           T                          E+  +  WGWG +G LGLG+T D++ P+ VN+ 
Sbjct: 185 T--------------------------EDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI- 217

Query: 412 DEFQNRDTQLEVFCGSGFTYAIS 434
               + D  + V CG   T +IS
Sbjct: 218 ----DGDKIVMVSCGWRHTISIS 236


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 91  ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 145

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 146 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 203

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D    +V+ FGSGK GQL
Sbjct: 204 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 261

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G      + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 262 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 319

Query: 274 SLPS 277
           ++P+
Sbjct: 320 TIPT 323



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 28/257 (10%)

Query: 69  VSMLACGGA-----HVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFD 122
           +++L  GGA      VLA +  +    G++F+WG+   GQLG G +      P+ V    
Sbjct: 63  LAVLERGGAGVQVHQVLAGSGGARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 122

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           G    +  ISAG  HS  +S SG +++ G   FGQLG G   S  SP  + +  N+ V  
Sbjct: 123 G--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEF 180

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
           +ACG  HS +L +D L   ++ FG+GK GQLG   +++ +R   + ++ +G    +I   
Sbjct: 181 LACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA-- 234

Query: 241 SANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
                  A +S  G ++++G G +       T D   P  LP  +S S+     +H    
Sbjct: 235 CGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH---- 288

Query: 295 TGDGEVLMLGGSHHGML 311
           T + E++M+ G +  +L
Sbjct: 289 TSEKELIMIAGGNQSIL 305



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 101/257 (39%), Gaps = 58/257 (22%)

Query: 180 VHQIACGMRHSLVLLKDCLGNQV-----------------YGFGSGKRGQLGVSKDRIRS 222
             QI+C  R   VL +   G QV                 + +G    GQLGV + +  S
Sbjct: 53  TRQISCSPRRLAVLERGGAGVQVHQVLAGSGGARTPSGELFAWGQNLHGQLGVGR-KFPS 111

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP 276
            + PQ+   L  + +  ISA    S ALS  G++Y+WG+      G   T   + P SL 
Sbjct: 112 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-SLI 170

Query: 277 SSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
            +L   +    A G +H  +LT DG +   G   HG L      +  RP  VA      L
Sbjct: 171 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----EL 225

Query: 334 DGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQ 393
            G +V QIA G  H+      F                           + ++G G+ GQ
Sbjct: 226 VGNRVTQIACGRWHTLAYVSDFG-------------------------KVFSFGSGKDGQ 260

Query: 394 LGLGNTCDQIHPKVVNL 410
           LG G T DQ+ P  V +
Sbjct: 261 LGNGGTLDQLIPLPVKV 277


>gi|149720067|ref|XP_001501726.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Equus caballus]
          Length = 444

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 169/424 (39%), Gaps = 71/424 (16%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           GA + GQLG G   D L PQ LN       V  +  GG H   +T      GG +F  G 
Sbjct: 3   GANSYGQLGLGHKEDVLLPQQLNDFCKPGCVRRITGGGGHSAVVTD-----GGSLFVCGL 57

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG G   D LY  P     G    I  ++ GW+ +  ++ +G + +CG  +FGQL
Sbjct: 58  NKDGQLGLGHTEDVLYFTPCRSLLG--CPIQQVACGWDFTIILTGNGQVLSCGSNSFGQL 115

Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRGQL 213
           G  HG  R    P  +     K V  IA G+RH+L      +  Q +G G   SG+R   
Sbjct: 116 GVPHGPRRC-VVPQAIEPLREKVV-SIAAGLRHALAATASGIVFQ-WGTGLASSGRRLCP 172

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSD 268
           G +     +   P    GL D +   + A  D SA+L+  G LY WG        +  + 
Sbjct: 173 GETLPLFLTAKEPSRVTGLEDSKATCVVAGSDHSASLTDAGELYVWGSNKHGQLASQAAF 232

Query: 269 VNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-----------D 313
           +  PQ + +        +    GW H++  T  G+V   G + +G L            D
Sbjct: 233 LPVPQKIEAHCFQHEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLESHENWRLD 292

Query: 314 PERVS--STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
            + +S    RP       +  L G    +++ G+EH+  V G                  
Sbjct: 293 MQGLSLPCPRPQKSTPSPLHCLTG--ATEVSCGSEHNLAVIGG----------------- 333

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                     A  +WGW EHG  G G   +   PK V    +     + L V CG+G + 
Sbjct: 334 ----------ACYSWGWNEHGMCGDGTEANIWAPKPV----QSLRLSSGLLVGCGAGHSL 379

Query: 432 AISR 435
           A+ +
Sbjct: 380 ALCQ 383



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 22/100 (22%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE---LSPQLLNLSS-------------LSSVSMLACGGAH 78
           KV++WG    GQLG      E   L  Q L+L               L+  + ++CG  H
Sbjct: 267 KVFTWGRADYGQLGRKLESHENWRLDMQGLSLPCPRPQKSTPSPLHCLTGATEVSCGSEH 326

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
            LA      VIGG  +SWG    G  G G   +   PKPV
Sbjct: 327 NLA------VIGGACYSWGWNEHGMCGDGTEANIWAPKPV 360



 Score = 38.5 bits (88), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 23/177 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG+   GQL +      + PQ +         V+ +  G  H++A T       GK
Sbjct: 214 ELYVWGSNKHGQLASQAAFLPV-PQKIEAHCFQHEKVTAVWSGWTHLVAQTET-----GK 267

Query: 93  VFSWGRGSSGQLG-------------HGEMVDALYPKPVTFFDGHRYT-ITHISAGWNHS 138
           VF+WGR   GQLG              G  +    P+  T    H  T  T +S G  H+
Sbjct: 268 VFTWGRADYGQLGRKLESHENWRLDMQGLSLPCPRPQKSTPSPLHCLTGATEVSCGSEHN 327

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
             V    C ++ G    G  G G   +  +P  V S    +   + CG  HSL L +
Sbjct: 328 LAVIGGAC-YSWGWNEHGMCGDGTEANIWAPKPVQSLRLSSGLLVGCGAGHSLALCQ 383


>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
 gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
          Length = 594

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 145/309 (46%), Gaps = 33/309 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+SWG    GQ G G     +  SP   ++    S+  +ACG +H LA+          +
Sbjct: 73  VYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPY----GL 128

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG    GQLG G+ ++   P  +   D  R T   I+ G  HS  VS+ G L+T G G
Sbjct: 129 YSWGCNRWGQLGLGDQINRNQPTRINHSD--RATFVAIACGSQHSMIVSNFGELYTFGCG 186

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           T G+LG GD      P  VSS V K +     G+ HS  +  D  G ++Y FG  + GQL
Sbjct: 187 TTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCV--DSTG-KIYSFGWNRYGQL 243

Query: 214 GVSKDRIRSVSLP------QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           G     ++S +LP      Q+T  +H +++V      + + ALS  G + ++  GFN+  
Sbjct: 244 GTGS--VKSHTLPAKMKETQITSKMHFVKVV---CGKNHTLALSNNGEMVSF--GFNACG 296

Query: 268 DV----NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS- 318
            +    +  Q  P+ + FS+  L    G+ H L +T +GE    G    G L   E  + 
Sbjct: 297 QLGVGSHLDQINPTKIEFSEKVLDIATGYYHSLCVTDNGEAYSWGYMSDGGLGLSEVYTH 356

Query: 319 STRPLSVAL 327
            T+P  + L
Sbjct: 357 QTKPKLIPL 365



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 147/345 (42%), Gaps = 52/345 (15%)

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
           +L ++S S+   G V+SWG    GQ G+G     + P PV F    + +I  I+ G +H+
Sbjct: 60  ILEVSSNSNE-DGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHT 118

Query: 139 GFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
             ++++   L++ G   +GQLG GD  + + P +++         IACG +HS+++    
Sbjct: 119 LAIAENPYGLYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSN-- 176

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            G ++Y FG G  G+LG+  +  R    P V   L   +IV   A    S+ + + G +Y
Sbjct: 177 FG-ELYTFGCGTTGRLGLGDESPR--FKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIY 233

Query: 258 T--WGR----GFNSTSDVNCPQSLP-----SSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
           +  W R    G  S      P  +      S + F +   G NH L L+ +GE++  G +
Sbjct: 234 SFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFN 293

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             G L     +    P  +   +       KV+ IA G  HS  VT              
Sbjct: 294 ACGQLGVGSHLDQINPTKIEFSE-------KVLDIATGYYHSLCVT-------------- 332

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT-CDQIHPKVVNL 410
                       +N    +WG+   G LGL      Q  PK++ L
Sbjct: 333 ------------DNGEAYSWGYMSDGGLGLSEVYTHQTKPKLIPL 365



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 31/248 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGG 91
           K++S+G    GQLGTG +     P  +  + ++S      + CG  H LAL++      G
Sbjct: 231 KIYSFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSN-----NG 285

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           ++ S+G  + GQLG G  +D + P  + F +     +  I+ G+ HS  V+D+G  ++ G
Sbjct: 286 EMVSFGFNACGQLGVGSHLDQINPTKIEFSE----KVLDIATGYYHSLCVTDNGEAYSWG 341

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             + G LG  +  +H +  K+   V+         +RH+     D   +++YG G     
Sbjct: 342 YMSDGGLGLSEVYTHQTKPKLIPLVH---------IRHTFSDSNDAF-DEIYGKGDENTT 391

Query: 212 QLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGRG--FNSTSD 268
           +  +   +       Q      D +E VG  A    SA +++ G LYT+G G  F + + 
Sbjct: 392 EETIENHK----KYIQDKYSTGDFVEKVG--AGAWNSAIITSSGKLYTFGYGDTFRTGNH 445

Query: 269 VNCPQSLP 276
               Q +P
Sbjct: 446 EENDQDIP 453



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 124/301 (41%), Gaps = 48/301 (15%)

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNV 180
           G R +I  +S+  N  G V      ++ G   FGQ G+G  ++    SPV+ S  +  ++
Sbjct: 55  GKRNSILEVSSNSNEDGLV------YSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISI 108

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
             IACG  H+L + ++  G  +Y +G  + GQLG+  D+I   + P           V I
Sbjct: 109 KTIACGDSHTLAIAENPYG--LYSWGCNRWGQLGLG-DQINR-NQPTRINHSDRATFVAI 164

Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDV--NCPQSLPSSLS------FSQAALGWNHVL 292
           +     S  +S  G LYT+G G      +    P+  P+ +S            G  H  
Sbjct: 165 ACGSQHSMIVSNFGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSS 224

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +   G++   G + +G L      S T P  +           K  QI +      VV 
Sbjct: 225 CVDSTGKIYSFGWNRYGQLGTGSVKSHTLPAKM-----------KETQITSKMHFVKVVC 273

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
           GK H + L                 + N  ++++G+   GQLG+G+  DQI+P  +   +
Sbjct: 274 GKNHTLAL-----------------SNNGEMVSFGFNACGQLGVGSHLDQINPTKIEFSE 316

Query: 413 E 413
           +
Sbjct: 317 K 317



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 11/184 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++++G GT G+LG G       P +  +SSL    +++C GA V+  +   S   GK++
Sbjct: 179 ELYTFGCGTTGRLGLGDESPRFKPTV--VSSLVGKQIVSC-GAGVMHSSCVDST--GKIY 233

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           S+G    GQLG G +     P  +       +     +  G NH+  +S++G + + G  
Sbjct: 234 SFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFN 293

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G +    +P K+    ++ V  IA G  HSL +  +    + Y +G    G L
Sbjct: 294 ACGQLGVGSHLDQINPTKIE--FSEKVLDIATGYYHSLCVTDN---GEAYSWGYMSDGGL 348

Query: 214 GVSK 217
           G+S+
Sbjct: 349 GLSE 352


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 136/280 (48%), Gaps = 32/280 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG      LG G   D L PQ +NL  ++ VS    G  H  A+     V GG VF
Sbjct: 55  RMYCWGL-----LGLGETLDVLYPQKVNLEGVTCVS---AGHRHAAAI-----VGGGDVF 101

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WGRG SGQLG G       P+P++F       +  +S G +HS F+++ G L+  G G 
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSF----PMPVKALSCGGSHSLFITEDGRLYATGRGK 157

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G   S  SPV+V        V    CG   S++  +     QV+ FGS   GQL
Sbjct: 158 EGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATES---GQVFTFGSDDYGQL 214

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
           G+ +    +++  +V + L    +  I+A    +AA++++G LYTWG G +      +T 
Sbjct: 215 GLGQFARYAMTPKEVAV-LAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTV 273

Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG--EVLML 303
           DV+ P  +    +L     A G +H + +   G  E LML
Sbjct: 274 DVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLML 313



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++ G G +GQLGTG     LSP  + +   S  V    CG    +  T       G+V
Sbjct: 149 RLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATES-----GQV 203

Query: 94  FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F++G    GQLG G+    A+ PK V    G    +  I+AG  H+  V+  G L+T G 
Sbjct: 204 FTFGSDDYGQLGLGQFARYAMTPKEVAVLAGK--NVRSIAAGDYHAAAVTSDGKLYTWGY 261

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ----------- 201
           G  GQLG+G+    S PV V    N  V  +ACG  H++ ++   L  Q           
Sbjct: 262 GRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLES 321

Query: 202 --VYGFGSGKRGQLG 214
             V+  G G+ GQLG
Sbjct: 322 GEVFVMGRGREGQLG 336



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 27/174 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+++G+   GQLG G+     ++P+ + + +  +V  +A G  H  A+TS      GK+
Sbjct: 202 QVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSD-----GKL 256

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD---------- 143
           ++WG G SGQLG+G  VD   P  V      R  +  ++ G +H+  V D          
Sbjct: 257 YTWGYGRSGQLGNGNTVDVSLPVLVRELQNLR--VQSVACGCDHTVAVIDRGLKEQLMLI 314

Query: 144 ------SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
                 SG +F  G G  GQLG GD     SP    S V   V Q+ACG  H+L
Sbjct: 315 SSQVLESGEVFVMGRGREGQLGRGDI--VESPAVYRS-VPLQVQQVACGTSHTL 365



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 116/296 (39%), Gaps = 53/296 (17%)

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +G LG G+      P KV+    + V  ++ G RH+  ++    G  V+ +G G  GQLG
Sbjct: 59  WGLLGLGETLDVLYPQKVNL---EGVTCVSAGHRHAAAIVG---GGDVFVWGRGFSGQLG 112

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
           +  ++      P        + +  +S  G  S  ++ +G LY  GRG          +S
Sbjct: 113 LGTNKSHFTPQPLS----FPMPVKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQES 168

Query: 275 LPSSLSFSQ---------AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           + S +             A  G +  ++ T  G+V   G   +G L     +      ++
Sbjct: 169 VLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLG----LGQFARYAM 224

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
             ++V+ L G  V  IAAG  H+A VT                           +  + T
Sbjct: 225 TPKEVAVLAGKNVRSIAAGDYHAAAVT--------------------------SDGKLYT 258

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 441
           WG+G  GQLG GNT D   P +V    E QN   Q  V CG   T A+    L  Q
Sbjct: 259 WGYGRSGQLGNGNTVDVSLPVLVR---ELQNLRVQ-SVACGCDHTVAVIDRGLKEQ 310


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 10/225 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G DG+LG G       P+L+       +  +ACGG H  A+TS      G +++
Sbjct: 35  VYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITS-----AGWLYT 89

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G  G+LGHG+  D L PK V     ++       +G   +  V+D   +++ GDG +
Sbjct: 90  WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 149

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G       P+K+ S     V ++ CG + S+ L +      VY +G G   +LG 
Sbjct: 150 GKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTR---SGAVYTWGKGDYHRLGH 206

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             D    V  P+    L   +I+ I+       A S +G ++TWG
Sbjct: 207 GTD--DHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWG 249



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 129/287 (44%), Gaps = 27/287 (9%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           ++ GG H +AL+S      G V+SWG G  G+LGHG  V   Y +P    D     I  I
Sbjct: 19  VSSGGKHCIALSSE-----GHVYSWGEGDDGKLGHGNKVS--YDRPKLIEDLLGVEIVDI 71

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RH 189
           + G +HS  ++ +G L+T G G +G+LGHGD      P  V +  +  V  +ACG     
Sbjct: 72  ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQ 131

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +L +  D   + V+ +G G  G+LG  +       +P     L  + +V +      S A
Sbjct: 132 TLCVTDD---DNVWSWGDGDYGKLG--RGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVA 186

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL 301
           L+  G +YTWG+      G  +   V  P+ + +         A G  H +  +  GEV 
Sbjct: 187 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVF 246

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             G +  G L D    +  RP       V  L G K+ ++A G+ H+
Sbjct: 247 TWGDNDEGQLGDGTTSALHRP-----RLVHALQGKKITRVACGSAHT 288



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 29/194 (14%)

Query: 18  NNAKPKIEEEEEEQQVV------------------KVWSWGAGTDGQLGTGRLHDELSPQ 59
           +  +PK+ E  ++ +V+                   VWSWG G  G+LG G       P 
Sbjct: 105 DQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVP- 163

Query: 60  LLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
            L + SL+   V  + CG    +ALT       G V++WG+G   +LGHG       P+ 
Sbjct: 164 -LKIDSLAGLGVVKVECGSQFSVALTR-----SGAVYTWGKGDYHRLGHGTDDHVRRPRK 217

Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
           V    G +  I  I+ G  H    SD G +FT GD   GQLG G   +   P  V +   
Sbjct: 218 VAALQGKK--IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQG 275

Query: 178 KNVHQIACGMRHSL 191
           K + ++ACG  H+L
Sbjct: 276 KKITRVACGSAHTL 289



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 131/316 (41%), Gaps = 54/316 (17%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           +S+G  H   +S  G +++ G+G  G+LGHG+  S+  P  +   +   +  IACG  HS
Sbjct: 19  VSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHS 78

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-R 246
             +        +Y +G G+ G+LG   S D++R    P+V   L D +++ ++  +GD +
Sbjct: 79  AAITS---AGWLYTWGKGRYGRLGHGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQ 131

Query: 247 SAALSAEGHLYTWG--------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
           +  ++ + ++++WG        RG +    V       + L   +   G    + LT  G
Sbjct: 132 TLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSG 191

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            V   G   +  L         RP      KV+ L G K+I IA G+ H    + K    
Sbjct: 192 AVYTWGKGDYHRLGHGTDDHVRRP-----RKVAALQGKKIISIATGSLHCVACSDKGE-- 244

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                                   + TWG  + GQLG G T     P++V+     Q + 
Sbjct: 245 ------------------------VFTWGDNDEGQLGDGTTSALHRPRLVH---ALQGKK 277

Query: 419 TQLEVFCGSGFTYAIS 434
               V CGS  T A S
Sbjct: 278 IT-RVACGSAHTLAWS 292



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 76/194 (39%), Gaps = 79/194 (40%)

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
           I+ V +S+ G    ALS+EGH+Y+WG G +                              
Sbjct: 14  IKKVAVSSGGKHCIALSSEGHVYSWGEGDD------------------------------ 43

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
                         G L    +VS  RP     + + +L GV+++ IA G  HSA +T  
Sbjct: 44  --------------GKLGHGNKVSYDRP-----KLIEDLLGVEIVDIACGGHHSAAITSA 84

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
             W                         + TWG G +G+LG G++ DQ+ PKVV    ++
Sbjct: 85  -GW-------------------------LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 118

Query: 415 QNRDTQLEVFCGSG 428
           +     ++V CGSG
Sbjct: 119 K----VIDVACGSG 128


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 39  QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 93

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 94  FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 151

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 152 SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 209

Query: 214 G 214
           G
Sbjct: 210 G 210



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 20/223 (8%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
           P+L+   +  ++  ++CG  H LAL S      G+ F+WG+ S GQLG G E      P+
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAS-----DGQFFTWGKNSHGQLGLGKEFPSQASPQ 64

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V   +G    +  ++AG  HS  +S SG +F  G    GQLG  D +   SP  V    
Sbjct: 65  RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            + V  I+CG  H+ VL K      V+ FG+G  GQLG   D +     P+  + L   E
Sbjct: 123 TQKVVYISCGEEHTAVLTK---SGGVFTFGAGSYGQLG--HDSMNDEVNPRRVLELMGSE 177

Query: 237 IVGISANGDRSAA-LSAEGHLYTWG------RGFNSTSDVNCP 272
           +  I+     + A + + G +Y +G       G   T +V CP
Sbjct: 178 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 93  VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 148 FGAGSYGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 206 RGQLGTG----HTCNVKCPSPVK 224



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 98/253 (38%), Gaps = 42/253 (16%)

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S +
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALASD---GQFFTWGKNSHGQLGLGKE-FPSQA 61

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLP 276
            PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D   P    L 
Sbjct: 62  SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 121

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
            +      + G  H  VLT  G V   G   +G L          P      +V  L G 
Sbjct: 122 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP-----RRVLELMGS 176

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +V QIA G +H+              +++ P            +  I  +G G  GQLG 
Sbjct: 177 EVTQIACGRQHT--------------LAFVP-----------SSGLIYAFGCGARGQLGT 211

Query: 397 GNTCDQIHPKVVN 409
           G+TC+   P  V 
Sbjct: 212 GHTCNVKCPSPVK 224


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 151/335 (45%), Gaps = 38/335 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V +WG+   GQLG       + P+L+ +L S + +  + CGG H   +T       G++ 
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHS-----GELI 64

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  GQLG G++ D + P+ +T        + ++S    HS  + + G L+T G   
Sbjct: 65  VWGYGGCGQLGLGDLKDIVIPRVMTSIK----NVINVSCSDRHSAAILEDGRLYTWGCNK 120

Query: 155 FGQLGHGD------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            G+LG G            +P  V   +N+ V +++CG  H+  L      N+ Y +G G
Sbjct: 121 SGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDL---NKAYTWGLG 177

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
            +G+LG        V  P++   L  + +  I   G  +A L   G +Y  G       G
Sbjct: 178 MQGRLG--HGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLG 235

Query: 263 FNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLM--LGGSHHGMLSDPERV 317
           F S  D+  P+ L  SL   S  + +LG+ H  V+T  G+V     GG    + + PE  
Sbjct: 236 FGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPE-- 293

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
               P  ++ + V  L+ +  + I+ G  H+ V++
Sbjct: 294 ----PDILSPKLVEKLNSIIAVNISCGHSHTVVIS 324



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 42/333 (12%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG G  GQLG G L D + P+++  +S+ +V  ++C   H  A+        G++++WG 
Sbjct: 66  WGYGGCGQLGLGDLKDIVIPRVM--TSIKNVINVSCSDRHSAAILED-----GRLYTWGC 118

Query: 99  GSSGQLGHGEMVDALY------PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
             SG+LG G +   L       P+ V      +  +  +S G  H+  ++D    +T G 
Sbjct: 119 NKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEK--VIKVSCGSFHTACLTDLNKAYTWGL 176

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LGHGD     +P  + S    +V  I CG  H+ +LL +    +VY  G G  G+
Sbjct: 177 GMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNN---GKVYFCGGGAFGK 233

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNS 265
           LG        + +P++  G L +  I  +S     SA ++ +G +YTWG+G      +N 
Sbjct: 234 LGFGSK--EDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNG 291

Query: 266 TS-DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH---HGMLSDPERVSS 319
              D+  P+ +   +S+     + G +H +V++  G+V   G +    HG++       +
Sbjct: 292 PEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLGHGVIDSKPNDPT 351

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             P+         L    ++Q++ G  H+  ++
Sbjct: 352 LHPI---------LQNKNIVQVSCGKTHTIALS 375



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 150/359 (41%), Gaps = 59/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V +WG    GQLG       + PK + + +  +R  I  +  G +HS  ++ SG L   G
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNR--IKEVCCGGHHSAVITHSGELIVWG 67

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G  GQLG GD +    P  ++S   KNV  ++C  RHS  +L+D    ++Y +G  K G
Sbjct: 68  YGGCGQLGLGDLKDIVIPRVMTSI--KNVINVSCSDRHSAAILED---GRLYTWGCNKSG 122

Query: 212 QLGV----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN--- 264
           +LG+           +  PQ+   L + +++ +S     +A L+     YTWG G     
Sbjct: 123 KLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRL 182

Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERV 317
               T+DV  P+ + S   LS      G +H  +L  +G+V   GG   G L     E +
Sbjct: 183 GHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDI 242

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
              + L  +L   S      + +++ G +HSAV+T K                       
Sbjct: 243 YIPKLLQGSLTNKS------IKEVSLGYQHSAVITTK----------------------- 273

Query: 378 AENRAIMTWGW-GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
                + TWG  G  G +  G   D + PK+V    E  N    + + CG   T  IS 
Sbjct: 274 ---GKVYTWGQGGRLGHIYNGPEPDILSPKLV----EKLNSIIAVNISCGHSHTVVISN 325



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 28/283 (9%)

Query: 35  KVWSWGAGTDGQLGTGR------LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
           ++++WG    G+LG G        +   +PQL+       V  ++CG  H   LT  +  
Sbjct: 112 RLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLN-- 169

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
              K ++WG G  G+LGHG+  D   PK +    G   ++ +I  G +H+  + ++G ++
Sbjct: 170 ---KAYTWGLGMQGRLGHGDTNDVYTPKLIESLAG--LSVKNIVCGGHHTAILLNNGKVY 224

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            CG G FG+LG G       P  +  S  NK++ +++ G +HS V+       +VY +G 
Sbjct: 225 FCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTK---GKVYTWGQ 281

Query: 208 GKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-- 264
           G  G+LG +       +  P++   L+ I  V IS     +  +S  G +Y WG   N  
Sbjct: 282 G--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLG 339

Query: 265 ---STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLM 302
                S  N P   P   + +  Q + G  H + L+ D E+L+
Sbjct: 340 HGVIDSKPNDPTLHPILQNKNIVQVSCGKTHTIALS-DIELLI 381


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 140/314 (44%), Gaps = 46/314 (14%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +  +V+      +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNDEGQLGLGDTEERT-TFHRVSFFTSQHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGRGFNSTSDVNCPQSL----PSSLSFSQA----ALGWNHVLVLTGDGEVL 301
           L+ +G L+ WG   NS   +  P  L    P  ++  +     + G+ H   +T DGE+ 
Sbjct: 155 LTEDGRLFMWGD--NSEGQIGLPNILNACVPHQVTIGKPVSWISCGYYHSAFVTTDGELY 212

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------- 352
           + G S +G L  P  + S   +   + ++      KVIQ+A G EHS V+T         
Sbjct: 213 IFGESENGKLGLPNELLSNHRIPQLVPEIPE----KVIQVACGGEHSVVLTEDAVYTFGL 268

Query: 353 GKFHWVRLFIISYTPFFPPFFINV-----------------IAENRAIMTWGWGEHGQLG 395
           G+F  + L  + +    P    N+                 + +N  + T+G G HG+LG
Sbjct: 269 GQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMYTFGDGRHGKLG 328

Query: 396 LG--NTCDQIHPKV 407
           LG  N  +Q  P +
Sbjct: 329 LGLENFTNQFTPTL 342



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G    GQLG G+  +      V+FF   ++ I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNDEGQLGLGDTEERTTFHRVSFFTS-QHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLPNILNACVPHQVT--IGKPVSWISCGYYHSAFVTTD---GELYIFGESENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +  + + +  +PQ+   + + +++ ++  G+ S  L+ E  +YT+G G            
Sbjct: 224 LPNELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLT-EDAVYTFGLGQFGQLGLGTLLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++  + + S  + G NH  +LT +G +   G   HG L
Sbjct: 282 ETSEPKVVENI-GNKTISYISCGENHAALLTDNGLMYTFGDGRHGKL 327



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +   PQL+       V  +ACGG H + LT  +      
Sbjct: 210 ELYIFGESENGKLGLPNELLSNHRIPQLV-PEIPEKVIQVACGGEHSVVLTEDA------ 262

Query: 93  VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G ++ +   PK V    G++ TI++IS G NH+  ++D+G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTLLFETSEPKVVENI-GNK-TISYISCGENHAALLTDNGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +  +P    +F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVF 364



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 72/186 (38%), Gaps = 46/186 (24%)

Query: 238 VGISANGDRSAALSAEGHLY-----TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALG 287
           V +S   + SA ++    LY      WG+ G  S S V+ P  +    P  +    AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL--AACG 95

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
            NH LV T  G V   GG+  G L   D E  ++   +S    +       K+ Q++AG+
Sbjct: 96  RNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQH------KIKQLSAGS 149

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
             SA +T                          E+  +  WG    GQ+GL N  +   P
Sbjct: 150 NTSAALT--------------------------EDGRLFMWGDNSEGQIGLPNILNACVP 183

Query: 406 KVVNLG 411
             V +G
Sbjct: 184 HQVTIG 189


>gi|403340993|gb|EJY69790.1| hypothetical protein OXYTRI_09469 [Oxytricha trifallax]
          Length = 1074

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 146/319 (45%), Gaps = 23/319 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL-------SPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
           ++  G+ + GQLG G    +L       +P L++      V  + CG     ++   S+ 
Sbjct: 137 LYMMGSNSQGQLGIGDNCPDLQNKDCAGAPCLVDKLRDYKVESVECGSNFTFSIVKDSNN 196

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
               +F+WG    GQLG   + +  +P  + FF+ +   I  ISAG +HS F+++   ++
Sbjct: 197 QEQSIFAWGCNREGQLGLSSLAEIDFPTKLKFFEDYNIRIKQISAGSSHSLFLTEESQVY 256

Query: 149 TCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
             G  + GQLG G   + +  P+ + + V+K + QI+ G  HSL L       +VY  G+
Sbjct: 257 AVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVIIQISAGDHHSLFLTS---TGEVYCCGN 313

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNST 266
            +  QLG+   +    +  ++T  L + +IV I A  + SAA+S  G L+ WG+G F S 
Sbjct: 314 NQLNQLGIMDAQTNQYTPLKIT-ALQNYKIVKIEAKQE-SAAISNAGELFLWGKGVFGS- 370

Query: 267 SDVNCPQS-LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                PQ  L  S      +LG +    L   G +   G + HG L   ++     P  V
Sbjct: 371 --YRTPQKILTISNPVCDISLGRSLGTALDSKGLLWTWGTNEHGELGVGDQDPRIHPYPV 428

Query: 326 ALEKVSNLDGVKVIQIAAG 344
                  L G KV QI  G
Sbjct: 429 LT-----LKGKKVTQIMCG 442



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 168/406 (41%), Gaps = 69/406 (16%)

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLG--HGEM----VDALY---PKPVTFFDGHRYTI 128
           H      P      +VF WG    GQLG  H ++     D ++   PK  +F       I
Sbjct: 63  HTQIKNEPQFYEFTEVFVWGDDRWGQLGLYHQKLKKGNCDQVFFKVPKTCSF----NILI 118

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD-------YRSHSSPVKVSSFVNKNVH 181
             IS G NHS  +++ G L+  G  + GQLG GD            +P  V    +  V 
Sbjct: 119 KQISCGDNHSAILTNQGHLYMMGSNSQGQLGIGDNCPDLQNKDCAGAPCLVDKLRDYKVE 178

Query: 182 QIACGMRHSLVLLKDCLGNQ---VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD--IE 236
            + CG   +  ++KD   NQ   ++ +G  + GQLG+S   +  +  P       D  I 
Sbjct: 179 SVECGSNFTFSIVKDS-NNQEQSIFAWGCNREGQLGLSS--LAEIDFPTKLKFFEDYNIR 235

Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAA 285
           I  ISA    S  L+ E  +Y  G   NS+  +   Q +  ++              Q +
Sbjct: 236 IKQISAGSSHSLFLTEESQVYAVGS--NSSGQLGIGQQINQAIQPIIIDTLVDKVIIQIS 293

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPE-RVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
            G +H L LT  GEV   G +    L   + + +   PL     K++ L   K+++I A 
Sbjct: 294 AGDHHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPL-----KITALQNYKIVKIEAK 348

Query: 345 AEHSAVVTG--KFHWVRLFIISY-TPFFPPFFINVIA------------ENRAIM-TWGW 388
            E +A+      F W +    SY TP       N +             +++ ++ TWG 
Sbjct: 349 QESAAISNAGELFLWGKGVFGSYRTPQKILTISNPVCDISLGRSLGTALDSKGLLWTWGT 408

Query: 389 GEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            EHG+LG+G+   +IHP  V+ L  +   + TQ  + CG  F  A+
Sbjct: 409 NEHGELGVGDQDPRIHPYPVLTLKGK---KVTQ--IMCGGKFVVAL 449


>gi|414883648|tpg|DAA59662.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1078

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 45/357 (12%)

Query: 33  VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
             +V+SWG+GT+ QLGTG  H +  P  +     S +  +A    H +A++S      G+
Sbjct: 151 ATEVFSWGSGTNYQLGTGNAHIQKLPCKVEALHGSYIKTVAASKFHSVAVSS-----NGE 205

Query: 93  VFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           +++WG G  G+LGH     G+    + P+ VT   G R  +  ++A  +H+   ++ G L
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLG-RKRVNAVAAAKHHTVIATELGEL 264

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           FT G    GQLG+    +  +P +V S   + +  +A   +HS  +       +V+ +G 
Sbjct: 265 FTWGSNREGQLGYPSVDTQPTPRRVGSL-KQRIISVAAANKHSAAVADT---GEVFTWGC 320

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
            K GQLG       S  +P++   L    + G+SA    +  L A+G ++TWG    +  
Sbjct: 321 NKEGQLGYGTSNSASNCIPRMVEYLKGKVLRGVSAAKYHTIVLGADGEVFTWGHRLVTPR 380

Query: 268 DVNCPQSLP----SSLSFSQ--------AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
            V   + L     ++L F +         A G  H   LT DG +       + + SDP+
Sbjct: 381 RVVVARCLKKGGNTNLKFHRMERLQVISVAAGTTHNTALTADGALF------YWVSSDPD 434

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFIISYTPFF 369
                    +  +++ ++ G  ++ I+AG   +AV T     F W        TP F
Sbjct: 435 ---------LKCQQIFSMCGRNIVNISAGKYWTAVATSTGDVFMWDAKKRKDETPIF 482



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 96/246 (39%), Gaps = 50/246 (20%)

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
           V  I+C +  +     D +  +V+ +GSG   QLG     I+   LP     LH   I  
Sbjct: 132 VDLISCPVSQANGDFPDAVATEVFSWGSGTNYQLGTGNAHIQK--LPCKVEALHGSYIKT 189

Query: 240 ISANGDRSAALSAEGHLYTWGRGFN-----------STSDVNCPQSLPSSL---SFSQAA 285
           ++A+   S A+S+ G LYTWG G              T+ V  P+ +   L     +  A
Sbjct: 190 VAASKFHSVAVSSNGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNAVA 249

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
              +H ++ T  GE+   G +  G L  P   +   P  V   K       ++I +AA  
Sbjct: 250 AAKHHTVIATELGELFTWGSNREGQLGYPSVDTQPTPRRVGSLKQ------RIISVAAAN 303

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQI 403
           +HSA V                          A+   + TWG  + GQLG G  N+    
Sbjct: 304 KHSAAV--------------------------ADTGEVFTWGCNKEGQLGYGTSNSASNC 337

Query: 404 HPKVVN 409
            P++V 
Sbjct: 338 IPRMVE 343


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 177/466 (37%), Gaps = 115/466 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-------------------VSMLACGG 76
           +++WG G+ G LG G   D  +P  + L S +                    V+  + G 
Sbjct: 202 LYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGA 261

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
            H +A TS      G +++WG G +G+LG G    +L P  V +       I  ++AG +
Sbjct: 262 KHSMACTSD-----GTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDR--DIVFVNAGDS 314

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  +   G L+T G G FG+LGHGD      P KV  F    V Q+ACG  H+L L   
Sbjct: 315 HSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHK 374

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSAEG 254
                V+ +G+G    LG  +    S  +  V   L DIE  ++ I+A    SAA++  G
Sbjct: 375 ---GTVFAWGAGL--ALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG 429

Query: 255 HLYTWGRGFNSTSDVNCPQSLP-------------------------------------- 276
            L  WG G +S       Q+ P                                      
Sbjct: 430 DLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDV 489

Query: 277 --------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
                   SS +      G +H + LTG G V + G +  G L   E V   +   V LE
Sbjct: 490 PGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLE 549

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
             S      + +IA G++H   V                          A+   +  WG 
Sbjct: 550 CFST----PIRRIACGSKHCLAV--------------------------AQYGDVFAWGA 579

Query: 389 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            ++GQLGLG       P  V    +       ++VFCG  ++  I+
Sbjct: 580 NDNGQLGLGVVRPSFEPAAVTALRQ------AVDVFCGDDYSACIT 619



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 177/432 (40%), Gaps = 87/432 (20%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++ WG      LG G  + + + P L+   S      ++CG  +   L   +   GGKV
Sbjct: 69  QLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKV 128

Query: 94  FSWGRGSSGQLGHGE-MVDAL-------------------YPKPVTFFDGHRYTITHISA 133
           +++G G+ G+LG+ +   D +                    PKP       +  I  IS 
Sbjct: 129 YTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISC 188

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKNVH----- 181
           G +H+  +SD G L+  G G++G LG GD     +PV+V       S    +NV      
Sbjct: 189 GADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVR 248

Query: 182 ----QIAC---GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
                + C   G +HS+    D     ++ +G G  G+LG+  +R  S+S P V   + D
Sbjct: 249 ADPVVVTCCSAGAKHSMACTSD---GTLWTWGHGGNGRLGLGHNR-GSLS-PAVVDYILD 303

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAAL 286
            +IV ++A    SA +  +G LYTWG       G     ++  P+ +     +   Q A 
Sbjct: 304 RDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVAC 363

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGA 345
           G  H L LT  G V   G        + E  S      VA+ K +S+++   V+ IAAG 
Sbjct: 364 GTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM---VAVPKHLSDIEAA-VLNIAAGP 419

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            HSA VT                              ++ WG G   +LG G+  +Q  P
Sbjct: 420 YHSAAVT--------------------------VGGDLLVWGVGGSSRLGHGDQQNQPFP 453

Query: 406 KVVNLGDEFQNR 417
           K V    + +NR
Sbjct: 454 KYVA---DLRNR 462



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 136/337 (40%), Gaps = 67/337 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG+  DGQLG G   +E   + + L   S+ +  +ACG  H LA+        G VF
Sbjct: 521 VWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQY-----GDVF 575

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVT-------FFDGHRYT--ITHISAGWNHSGFV-SDS 144
           +WG   +GQLG G +  +  P  VT        F G  Y+  IT +    + SG   ++ 
Sbjct: 576 AWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEF 635

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSS---PVKV-----------SSFVNKNVHQIAC----- 185
           G L+  G    G+LG G+  +  S   P KV            S   +   ++ C     
Sbjct: 636 GDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSP 695

Query: 186 ---GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
              G  HSL +       + Y +G+G  G+LG+      +   P        + +  ++A
Sbjct: 696 LCSGTSHSLAITAQ---GECYAWGAGYYGRLGIGT--TANAYTPTRCDFPKGVRLRSVAA 750

Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVN--CPQ---------SLPSSLSFSQAALGWNHV 291
               S ALS +G L+ WGR  ++ S  N   P+          +P   S S +     H 
Sbjct: 751 GACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASE---RHS 807

Query: 292 LVLTGDGEVLMLGGS----------HHGMLSDPERVS 318
           L +T  GEV   G +              L  PERV+
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVA 844



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 142/357 (39%), Gaps = 68/357 (19%)

Query: 47  LGTGRLHDELSP-QLLNLSSLS-------SVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           LG  RL  E S   +L++   S       ++  L CG +H +ALT       G V+ WG 
Sbjct: 472 LGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTG-----AGAVWVWGS 526

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG GE V+    +PV   +     I  I+ G  H   V+  G +F  G    GQL
Sbjct: 527 NDDGQLGLGEDVEEDQYEPVK-LECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQL 585

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG-------------NQVYGF 205
           G G  R    P  V++   +    + CG  +S  +    LG               ++ +
Sbjct: 586 GLGVVRPSFEPAAVTAL--RQAVDVFCGDDYSACITS--LGGAQSVSGETGTEFGDLWAW 641

Query: 206 GSGKRGQLGVSKD---------RIRSVSLPQVTIGLHDIEIVG-----------ISANGD 245
           G+ + G+LG+ +D         +    S+P     L  +E+             + +   
Sbjct: 642 GAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTS 701

Query: 246 RSAALSAEGHLYTWGRGF------NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGD 297
            S A++A+G  Y WG G+       +T++   P     P  +     A G  H L L+ D
Sbjct: 702 HSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMD 761

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVAL-EKVSNLDGV-KVIQIAAGAEHSAVVT 352
           G++   G          +  S+T  +S  +  ++    GV KV  I+A   HS  VT
Sbjct: 762 GDLWFWGRRE-------DTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVT 811



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 123/328 (37%), Gaps = 88/328 (26%)

Query: 127 TITHISAGWNHS---GFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQ 182
           ++  ++ G  H+   G   D   LF  G      LG G + R    P  V  F      +
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFE 106

Query: 183 IACGMRHSLVLLKDCL--GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
           ++CG  +S VL+K     G +VY FG G RG+LG  K++   V+  Q             
Sbjct: 107 VSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQ------------- 153

Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVL 294
              GD S            G G         P+  PS + F      ++ + G +H L L
Sbjct: 154 ---GDFS------------GDGQEDGPSWFTPK--PSRVRFRDKCKIARISCGADHTLAL 196

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL-------EKVSNL-------DGVKVIQ 340
           + +G +   G   +G L   +   S  P+ V L       +K  N+       D V V  
Sbjct: 197 SDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTC 256

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
            +AGA+HS   T                           +  + TWG G +G+LGLG+  
Sbjct: 257 CSAGAKHSMACT--------------------------SDGTLWTWGHGGNGRLGLGHNR 290

Query: 401 DQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
             + P VV   D   +RD    VF  +G
Sbjct: 291 GSLSPAVV---DYILDRDI---VFVNAG 312



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           + ++WGAG  G+LG G   +  +P   +      +  +A G  H LAL+     + G ++
Sbjct: 711 ECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALS-----MDGDLW 765

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WGR    +       + + P+     +G      +  ISA   HS  V+++G +F  GD
Sbjct: 766 FWGR----REDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGD 821

Query: 153 GTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
               Q G G  ++     P +V+   +     +A G + S  +L      +V+  G  K 
Sbjct: 822 NKLYQTGCGKRQAERLDRPERVAGLPSA-CQWVATGPQGSFFILAS---GEVFAAGVIKS 877

Query: 211 GQLGVSKDRIRSVSLPQVTIGLH 233
           G+LG    + R+     V +  H
Sbjct: 878 GRLGTGWSK-RTYQFSPVAVITH 899



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 59/248 (23%)

Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           +++ F   +V ++A G+ H+LV+       Q++G+G      LG+  + IR    P +  
Sbjct: 39  RIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVE-IRERVFPGLVP 97

Query: 231 GLHDIEIVGISANGDRSAALSAE-----GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
               +    +S   + SA L        G +YT+G G  +   +  P++    ++  Q  
Sbjct: 98  FFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLG--NRGRLGYPKNKADGVAGYQGD 155

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
                    +GDG+             D     + +P      +V   D  K+ +I+ GA
Sbjct: 156 F--------SGDGQ------------EDGPSWFTPKP-----SRVRFRDKCKIARISCGA 190

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
           +H+                            +++  A+  WG G +G LG G+T D   P
Sbjct: 191 DHTLA--------------------------LSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 406 KVVNLGDE 413
             V LG E
Sbjct: 225 VRVYLGSE 232


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 178/425 (41%), Gaps = 80/425 (18%)

Query: 26  EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG------AHV 79
           + E+      +++ G G  GQLG  +  ++  PQ +          L  G       A V
Sbjct: 167 QPEQAAPEYAMYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPLYQGAPDDIHLAVV 226

Query: 80  LALTSPSSVIG--GKVFSWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGW 135
            A +S S+ I   G++++WG  SSG+LGHG    ++   P+ +T     R  I  +S G 
Sbjct: 227 SAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSL--QRTRIVSVSCGA 284

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           NH+  +S++G L++CG G  GQLGHG +      + V +  ++ V  +A G  HS+ L  
Sbjct: 285 NHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGRAHSVALAA 344

Query: 196 DCLGNQVYGFGSGKRGQLGVSK---------DRIRSVSLPQVTIGLH------DIEIVGI 240
           D    +++ +G   +GQLG ++          +  S+  PQ    L          +  I
Sbjct: 345 D---GKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAI 401

Query: 241 SANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQSLPSSLSFS--------QA 284
           +A GD S A++  G L  +G         G   T D   P  +P +L           Q 
Sbjct: 402 AAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVRAMQV 461

Query: 285 ALGWNHVLVLT---GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
             G  H L L    G  +V  +GG+ +G L   +R+   R        +  L G  ++ +
Sbjct: 462 HCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHR-----FHPIPALKGKSIVCV 516

Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
           + G  H+A                           I ++  +  WG G+ GQLGLG+  +
Sbjct: 517 SVGDWHNA--------------------------AICQDGRLYVWGRGDCGQLGLGDDRN 550

Query: 402 QIHPK 406
           +  PK
Sbjct: 551 RWAPK 555


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 157 ELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 212 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D    +V+ FGSGK GQL
Sbjct: 270 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 327

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G      + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 328 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 385

Query: 274 SLPS 277
           ++P+
Sbjct: 386 TIPT 389



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 30/255 (11%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHR 125
             +  + CG  H LAL+      GG++F+WG+   GQLG G    +   P+ V    G  
Sbjct: 137 KKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAG-- 189

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG  HS  +S SG +++ G   FGQLG G   S  SP  + +  N+ V  +AC
Sbjct: 190 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLAC 249

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  HS +L +D L   ++ FG+GK GQLG   +++ +R    P +   L    +  I+  
Sbjct: 250 GGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELR----PCLVAELVGNRVTQIACG 302

Query: 244 GDRSAALSAE-GHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
              + A  ++ G ++++G G +       T D   P  LP  +S S+     +H    T 
Sbjct: 303 RWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TS 356

Query: 297 DGEVLMLGGSHHGML 311
           + E++M+ G +  +L
Sbjct: 357 EKELIMIAGGNQSIL 371



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 103/242 (42%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV +    S + PQ+   L  + +
Sbjct: 137 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGRT-FPSTTTPQIVEHLAGVPL 192

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL  +L   +    A G 
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGG 251

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 306

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                 F                           + ++G G+ GQLG G T DQ+ P  V
Sbjct: 307 LAYVSDFG-------------------------KVFSFGSGKDGQLGNGGTLDQLIPLPV 341

Query: 409 NL 410
            +
Sbjct: 342 KV 343



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 87/233 (37%), Gaps = 45/233 (19%)

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
             QI C  R   VL +   G QV+   +G  G              P+      +++I  
Sbjct: 53  TRQICCSPRRLAVLERGGAGVQVHQVLAGSGG-----------ARTPKCIKLGKNMKIHS 101

Query: 240 ISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
           +    D    LS++G  + +             +S+       Q   G  H L L+  GE
Sbjct: 102 VDQGADHMLILSSDGKPFEYDYSMKHLRS----ESILQEKKIIQITCGDYHSLALSKGGE 157

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G + HG L     V  T P +   + V +L GV + QI+AG  HS  ++       
Sbjct: 158 LFAWGQNLHGQLG----VGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS------- 206

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                            ++ N  I +WG  E GQLGLG+T  +  P ++   D
Sbjct: 207 -----------------MSGN--IYSWGKNEFGQLGLGHTESKDSPSLIEALD 240


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 157 ELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +SWG+   GQLG G       P  +   D  +  +  ++ G +HS  ++  G LFT G G
Sbjct: 212 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLGH   ++   P  V+  V   V QIACG  H+L  + D    +V+ FGSGK GQL
Sbjct: 270 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 327

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           G      + + LP       ++++   ++  +          +  W +  NS   VN  +
Sbjct: 328 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 385

Query: 274 SLPS 277
           ++P+
Sbjct: 386 TIPT 389



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 28/254 (11%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHR 125
             +  + CG  H LAL+      GG++F+WG+   GQLG G    +   P+ V    G  
Sbjct: 137 KKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAG-- 189

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ISAG  HS  +S SG +++ G   FGQLG G   S  SP  + +  N+ V  +AC
Sbjct: 190 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLAC 249

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  HS +L +D L   ++ FG+GK GQLG   +++ +R   + ++ +G    +I      
Sbjct: 250 GGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA--CGR 303

Query: 244 GDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
               A +S  G ++++G G +       T D   P  LP  +S S+     +H    T +
Sbjct: 304 WHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TSE 357

Query: 298 GEVLMLGGSHHGML 311
            E++M+ G +  +L
Sbjct: 358 KELIMIAGGNQSIL 371



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 103/242 (42%), Gaps = 44/242 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV +    S + PQ+   L  + +
Sbjct: 137 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGRT-FPSTTTPQIVEHLAGVPL 192

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G   T   + P SL  +L   +    A G 
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGG 251

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 306

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                 F                           + ++G G+ GQLG G T DQ+ P  V
Sbjct: 307 LAYVSDFG-------------------------KVFSFGSGKDGQLGNGGTLDQLIPLPV 341

Query: 409 NL 410
            +
Sbjct: 342 KV 343



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 87/233 (37%), Gaps = 45/233 (19%)

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
             QI C  R   VL +   G QV+   +G  G              P+      +++I  
Sbjct: 53  TRQICCSPRRLAVLERGGAGVQVHQVLAGSGG-----------ARTPKCIKLGKNMKIHS 101

Query: 240 ISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
           +    D    LS++G  + +             +S+       Q   G  H L L+  GE
Sbjct: 102 VDQGADHMLILSSDGKPFEYDYSMKHLRS----ESILQEKKIIQITCGDYHSLALSKGGE 157

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           +   G + HG L     V  T P +   + V +L GV + QI+AG  HS  ++       
Sbjct: 158 LFAWGQNLHGQLG----VGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS------- 206

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                            ++ N  I +WG  E GQLGLG+T  +  P ++   D
Sbjct: 207 -----------------MSGN--IYSWGKNEFGQLGLGHTESKDSPSLIEALD 240


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  +T I+ G   S  V D+G +F  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVT-IACGQMCSMAVVDTGEVFVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRVIEIAACHS-AHTSAAKTQGGHVYMWGQ 336



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 22/272 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 61  TTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSG-PHVVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  IV I+     S A+   G ++ WG     
Sbjct: 177 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNG 235

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G  S+ +   P  + +   +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           + + P  V +EK       +VI+IAA   HSA
Sbjct: 296 NQSYPTPVVVEK------DRVIEIAAC--HSA 319



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P K+ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATT--EGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +++ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RIAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 274 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPV 303


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 143/342 (41%), Gaps = 85/342 (24%)

Query: 73  ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK----PVTFFDGHRYTI 128
           ACG  H +ALT       G+V+SWG  ++G LGHG     L PK    P+ +      +I
Sbjct: 4   ACGKLHTVALTEE-----GRVYSWG-CANGALGHGNSKSQLLPKALDRPLIY---SMPSI 54

Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
           T I+ G  H+  V   G L+T G   +GQLGHGD ++H  P +V +   K   + A G +
Sbjct: 55  TTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQ 114

Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           HSLVL +    N+VY FGS   GQLG+ + +++  + P +   L    +  I+     S 
Sbjct: 115 HSLVLTE---ANKVYAFGSNVFGQLGL-ESKVKYSAAPDIVSRLRRSGVCHITCGYSHSM 170

Query: 249 ALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           AL     LY+WGR        +C Q            LG  H                  
Sbjct: 171 ALLKSEQLYSWGRN-------DCGQ------------LGLGHYR---------------- 195

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT-P 367
                    SS  P  + + K S     +V QI+ G +H+            F+  Y  P
Sbjct: 196 ---------SSPVPEHLTMFKKS-----QVQQISCGYDHNIA----------FVSEYAGP 231

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             PP           + TWG GE GQLG      +  PKVV 
Sbjct: 232 GVPPL--------EKVYTWGRGEEGQLGHDELYSRCVPKVVQ 265



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 122/286 (42%), Gaps = 68/286 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN---LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +V+SWG   +G LG G    +L P+ L+   + S+ S++ +ACG  H LA+        G
Sbjct: 18  RVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTLAVGQD-----G 71

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG---------------------------- 123
            +++WGR   GQLGHG+      P+ V   +                             
Sbjct: 72  TLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSN 131

Query: 124 -----------------------HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
                                   R  + HI+ G++HS  +  S  L++ G    GQLG 
Sbjct: 132 VFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGL 191

Query: 161 GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG------NQVYGFGSGKRGQLG 214
           G YRS   P  ++ F    V QI+CG  H++  + +  G       +VY +G G+ GQLG
Sbjct: 192 GHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLG 251

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              D + S  +P+V   L    I  ++A G  SAA+     LYTWG
Sbjct: 252 --HDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 20/194 (10%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           KV+++G+   GQLG   ++    +P +++    S V  + CG +H +AL         ++
Sbjct: 124 KVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSE-----QL 178

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSG------- 145
           +SWGR   GQLG G    +  P+ +T F   +  +  IS G++H+  FVS+         
Sbjct: 179 YSWGRNDCGQLGLGHYRSSPVPEHLTMFK--KSQVQQISCGYDHNIAFVSEYAGPGVPPL 236

Query: 146 -CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
             ++T G G  GQLGH +  S   P  V + + + +  +A G   S  + +     Q+Y 
Sbjct: 237 EKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDE---AKQLYT 293

Query: 205 FGSGKRGQLGVSKD 218
           +G  + GQLG   D
Sbjct: 294 WGCSREGQLGHGDD 307



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 15/125 (12%)

Query: 238 VGISANGDRSAALSAEGHLYTWG-----RGFNSTSDVNCPQSLPSSLSFSQA-----ALG 287
           VG +     + AL+ EG +Y+WG      G  ++     P++L   L +S       A G
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACG 60

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             H L +  DG +   G + +G L   +  +   P      +V  L+    I+ AAG +H
Sbjct: 61  EFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLP-----RRVEALEKKICIKAAAGGQH 115

Query: 348 SAVVT 352
           S V+T
Sbjct: 116 SLVLT 120


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V+ +ACG  H L LTS      G+
Sbjct: 48  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVTEVACGSYHSLVLTSD-----GE 101

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   + L P+ VT    ++  + +I+ G   S  V ++G ++  G 
Sbjct: 102 VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNK-VVVNIACGQMCSMAVVNTGEVYVWGY 160

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 161 NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 217

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 218 LGTGNKSNQSYPAPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 265



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 20/251 (7%)

Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
           G LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G
Sbjct: 5   GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNG 63

Query: 162 DYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
                  P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S    
Sbjct: 64  TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTA 119

Query: 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQS 274
             +   +VT  L +  +V I+     S A+   G +Y WG       G  S+ +   P  
Sbjct: 120 NQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 179

Query: 275 LPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
           + +   +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK   
Sbjct: 180 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEK--- 236

Query: 333 LDGVKVIQIAA 343
               ++I+IAA
Sbjct: 237 ---DRIIEIAA 244



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 13/218 (5%)

Query: 45  GQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
           G LG G +   + P+ L   +   ++ L+ G G H++  T+      G+VF+WG  +  Q
Sbjct: 5   GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTE-----GEVFTWGHNAYSQ 59

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG+G     L P  ++    ++  +T ++ G  HS  ++  G +F  G    GQ+G G  
Sbjct: 60  LGNGTTNHGLVPCHISTNLSNK-QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 118

Query: 164 RSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
            +   P +V+  + NK V  IACG   S+ ++      +VY +G    GQLG+     + 
Sbjct: 119 ANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNT---GEVYVWGYNGNGQLGLGSSGNQP 175

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              P     L  I +  ++     +  L+ EG +Y WG
Sbjct: 176 T--PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 211


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 149/335 (44%), Gaps = 49/335 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG  + G+LG    +D   P +++      ++ +ACG  H LAL        G V++
Sbjct: 229 VYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLALDEI-----GVVYA 283

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG GS G+LG G       PK +  F+  +  IT I+ G   S  +SDSG +F+ G G  
Sbjct: 284 WGNGSGGRLGLGNSEVVSIPKIIPHFEDEK--ITSIACGQEFSLALSDSGKVFSWGKGLH 341

Query: 156 GQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           G LG+      S S+P  +         QI+CG  HS+VL K      VY FGS    +L
Sbjct: 342 GNLGYDVSTMLSQSTPKVIPML--PPASQISCGNWHSMVLSK---SGDVYTFGSNIDCRL 396

Query: 214 GVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC- 271
           G S +     S P  V IG    +I  I A  + +A LS    +YTWG      S+++C 
Sbjct: 397 GHSGNG----STPTMVQIG---SKIKKIGAGANFNAVLSESNAIYTWG------SNIHCQ 443

Query: 272 --------------PQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                         PQ + + L +  S   +G+ HV+VLT  GEV   G +        E
Sbjct: 444 LGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGVGE 503

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            +           +V   D   V +IAAG   S +
Sbjct: 504 AIKEV----CNFTRVKIPDNSTVFKIAAGGNSSLI 534



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 134/291 (46%), Gaps = 60/291 (20%)

Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
            F+   ++ T I  G N +  ++D+G +++ G  ++G+LGH      S P  +S+F NK 
Sbjct: 202 LFNQKEHSPTTIKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQ 261

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
           + QIACG  HSL L  D +G  VY +G+G  G+LG+    +  VS+P++     D +I  
Sbjct: 262 ITQIACGKDHSLAL--DEIG-VVYAWGNGSGGRLGLGNSEV--VSIPKIIPHFEDEKITS 316

Query: 240 ISANGDRSAALSAEGHLYTWGRGF--NSTSDV------NCPQSLPSSLSFSQAALGWNHV 291
           I+   + S ALS  G +++WG+G   N   DV      + P+ +P     SQ + G  H 
Sbjct: 317 IACGQEFSLALSDSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQISCGNWHS 376

Query: 292 LVLTGDGEVLMLGGS------HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
           +VL+  G+V   G +      H G  S P  V                 G K+ +I AGA
Sbjct: 377 MVLSKSGDVYTFGSNIDCRLGHSGNGSTPTMVQI---------------GSKIKKIGAGA 421

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
             +A                          V++E+ AI TWG   H QLG+
Sbjct: 422 NFNA--------------------------VLSESNAIYTWGSNIHCQLGV 446



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 22/226 (9%)

Query: 35  KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           KV+SWG G  G LG     +  + +P+++ +  L   S ++CG  H + L+       G 
Sbjct: 332 KVFSWGKGLHGNLGYDVSTMLSQSTPKVIPM--LPPASQISCGNWHSMVLSK-----SGD 384

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+++G     +LGH    +   P  V    G +  I  I AG N +  +S+S  ++T G 
Sbjct: 385 VYTFGSNIDCRLGHSG--NGSTPTMVQI--GSK--IKKIGAGANFNAVLSESNAIYTWGS 438

Query: 153 GTFGQLG--HGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
               QLG    D+R+++  P  V + +   +  I  G  H +VL       +V+ FG   
Sbjct: 439 NIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTD---TGEVFTFGDNS 495

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
             Q GV +      +  +V I   +  +  I+A G+ S    + GH
Sbjct: 496 MMQCGVGEAIKEVCNFTRVKIP-DNSTVFKIAAGGNSSLISLSSGH 540


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 147/316 (46%), Gaps = 44/316 (13%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           K+++WG    G LG       E +P L+   SL+SV ++  A GG H LA+        G
Sbjct: 58  KLFTWGWNQRGTLGHPPETKTESTPSLVK--SLASVKIVQAAIGGWHCLAVDDQ-----G 110

Query: 92  KVFSWGRGSSGQLGH-------GEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
           + ++WG    GQ G        G  V  D + PK        + T+  ++AG  HS  ++
Sbjct: 111 RAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA----PQLTVRQVAAGGTHSVVLT 166

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
             G ++T G         GD +  S PV+V     +NV  IA G  H+L L +D     +
Sbjct: 167 REGYVWTWGQ----PWPPGDIKQISIPVRVQGL--ENVRLIAVGAFHNLALKED---GTL 217

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G+ + GQLG    + RS  +P    GL D+ +V I+A G  S AL+ EG +Y WGRG
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSFPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRG 275

Query: 263 F--------NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                    N  S    PQ  +L +     Q + G  H + LT DG +   G   HG L 
Sbjct: 276 EHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335

Query: 313 DPERVSSTRPLSVALE 328
              +V++ +PL + ++
Sbjct: 336 YGRKVTTGQPLELPID 351



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 153/363 (42%), Gaps = 70/363 (19%)

Query: 93  VFSWGRGSSGQLGHG--------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           V +WG G  GQLG G         +V+AL P          + +  +  G  +S  + D 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVEALEP----------FNVRSVVGGSRNSLAICDD 56

Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           G LFT G    G LGH  + ++ S+P  V S  +  + Q A G  H L +       + Y
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQ---GRAY 113

Query: 204 GFGSGKRGQLG--VSKDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
            +G  + GQ G   SKD       R + +P+       + +  ++A G  S  L+ EG++
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--PQLTVRQVAAGGTHSVVLTREGYV 171

Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
           +TWG+ +       ++ P  +    +    A+G  H L L  DG +   G + +G L   
Sbjct: 172 WTWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG-- 229

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                T+P S  +  V  LD + ++ IAAG  HS  +T +                    
Sbjct: 230 --TGDTQPRSFPI-PVQGLDDLTLVDIAAGGWHSTALTNEGE------------------ 268

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                   +  WG GEHG+LG G+     ++ P+ VNL       D  ++V CG   + A
Sbjct: 269 --------VYGWGRGEHGRLGFGDNDKSSKMLPQKVNL---LAGEDI-IQVSCGGTHSVA 316

Query: 433 ISR 435
           ++R
Sbjct: 317 LTR 319



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 169/425 (39%), Gaps = 77/425 (18%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG+G DGQLG G   ++    ++      +V  +  G  + LA+        GK+F+WG
Sbjct: 9   AWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDD-----GKLFTWG 63

Query: 98  RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
               G LGH  E      P  V      +     I  GW H   V D G  +  G   +G
Sbjct: 64  WNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121

Query: 157 QLGHGDYRSHS-SPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           Q G    +  +  PV+    + K       V Q+A G  HS+VL ++     V+ +G   
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTRE---GYVWTWG--- 175

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
             Q     D I+ +S+P    GL ++ ++ + A    + AL  +G L+ WG    G   T
Sbjct: 176 --QPWPPGD-IKQISIPVRVQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGT 230

Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            D   P+S P        L+    A G  H   LT +GEV   G   HG L   +   S+
Sbjct: 231 GDTQ-PRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSS 289

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
           + L    +KV+ L G  +IQ++ G  HS  +T                           +
Sbjct: 290 KMLP---QKVNLLAGEDIIQVSCGGTHSVALT--------------------------RD 320

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHP-----KVVNLGDEFQNRDTQLE-------VFCGSG 428
             I ++G G+HG+LG G       P      +  L   F + D + +       V CG  
Sbjct: 321 GRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGR 380

Query: 429 FTYAI 433
            T AI
Sbjct: 381 HTLAI 385



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 27/179 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +W+WG    GQLGTG       P  +  L  L+ V  +A GG H  ALT+      G+V+
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVD-IAAGGWHSTALTNE-----GEVY 270

Query: 95  SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WGRG  G+LG G+      + P+ V    G    I  +S G  HS  ++  G +F+ G 
Sbjct: 271 GWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGE--DIIQVSCGGTHSVALTRDGRIFSFGR 328

Query: 153 GTFGQLGHGDYRSHSSPVKVS--------SFVNKN--------VHQIACGMRHSLVLLK 195
           G  G+LG+G   +   P+++          F + +           +ACG RH+L +++
Sbjct: 329 GDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 11/226 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G  T GQLG G   D  +P+++ +  LSSV  +A G +++L++T       G V+S
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEV--LSSVVQIAAGPSYILSVTE-----NGTVYS 289

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G++  LGHGE  D L P+ +  F      I  +SAG  H+  +  +G ++T G G  
Sbjct: 290 FGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYC 349

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LGHGD    ++P  ++S  N+ V Q+    R + VL+       VYGFGS   G LG 
Sbjct: 350 GALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDS---GSVYGFGSMGFGSLGF 406

Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              R+    L P++   L    +  IS     +  +++ G ++ +G
Sbjct: 407 LDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFG 452



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 22/255 (8%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++ G  + GQLGHG+  D   PK +        ++  I+AG ++   V+++G +++ 
Sbjct: 235 GHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS----SVVQIAAGPSYILSVTENGTVYSF 290

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G G    LGHG+      P  +  F  K +H  +++ G  H++ L  +     VY +G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSN---GYVYTWGKG 347

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNS-- 265
             G LG   D I   + P++   L +  +V + A   ++  L   G +Y +G  GF S  
Sbjct: 348 YCGALG-HGDEIEKTT-PELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLG 405

Query: 266 ------TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                 +  V  P+ L +  +   SQ + G  H +V+T  G++   G +    L      
Sbjct: 406 FLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLR 465

Query: 318 SSTRPLSVALEKVSN 332
           S   P  + ++ VS 
Sbjct: 466 SCLEPTEIFIKDVSE 480



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 141/364 (38%), Gaps = 83/364 (22%)

Query: 55  ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDAL 113
           E S Q++  SS +    +  G  H L +++ S      V+S G G  G LG G E    +
Sbjct: 101 EQSSQMVETSSGNM--QITTGKYHTLLISNSS------VYSCGSGLCGVLGQGSETTQCV 152

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD--------------------- 152
               + F    R  + H+SA +NH+ FV  SG +FTCGD                     
Sbjct: 153 AFTRIDFPPLAR--VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLV 210

Query: 153 --------------------------------GTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
                                            T GQLGHGD +   +P  +   V  +V
Sbjct: 211 ESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIE--VLSSV 268

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIV 238
            QIA G  + L + ++     VY FGSG    L  G   D ++  ++ +       I IV
Sbjct: 269 VQIAAGPSYILSVTEN---GTVYSFGSGANFCLGHGEQHDELQPRAIQKFR--RKGIHIV 323

Query: 239 GISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPS--SLSFSQAALGWNH 290
            +SA  + + AL + G++YTWG+G+          +   P+ L S  +    Q       
Sbjct: 324 RVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRK 383

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
             VL   G V   G    G L   +R  S + L   +  +  L    V QI+ G  H+ V
Sbjct: 384 TFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRI--LDTLRTHHVSQISTGLYHTVV 441

Query: 351 VTGK 354
           +T +
Sbjct: 442 ITSR 445



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 43/288 (14%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF--VNKNVHQIACGM 187
            I+ G  H+  +S+S  +++CG G  G LG G   +         F  + + VH ++   
Sbjct: 115 QITTGKYHTLLISNSS-VYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVH-VSASF 172

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            H+  +++     +V+  G       G  +D  R +  P++   L  I    ++A  + +
Sbjct: 173 NHAAFVMQS---GEVFTCGDNSSSCCG-HRDTTRPIFRPRLVESLKGIPCKQVAAGLNFT 228

Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
             L+ +GH+YT G       G   T D   P+ +    S  Q A G +++L +T +G V 
Sbjct: 229 VFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSVVQIAAGPSYILSVTENGTVY 288

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G   +  L   E+    +P   A++K     G+ +++++AG EH+             
Sbjct: 289 SFGSGANFCLGHGEQHDELQPR--AIQKFRR-KGIHIVRVSAGDEHAV------------ 333

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                          +  N  + TWG G  G LG G+  ++  P+++ 
Sbjct: 334 --------------ALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLT 367



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 60/192 (31%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGKV 93
           V+S+G+G +  LG G  HDEL P+ +       + ++  + G  H +AL S      G V
Sbjct: 287 VYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDS-----NGYV 341

Query: 94  FSWGRGSSGQLGHGEMVDALYP-------------------------------------- 115
           ++WG+G  G LGHG+ ++   P                                      
Sbjct: 342 YTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGF 401

Query: 116 ---------------KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
                          KP        + ++ IS G  H+  ++  G +F  GD    QLGH
Sbjct: 402 GSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGH 461

Query: 161 GDYRSHSSPVKV 172
              RS   P ++
Sbjct: 462 DTLRSCLEPTEI 473


>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 651

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 113/225 (50%), Gaps = 17/225 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V + G G+ G+LG G  +++ + + L      S+  VS       H LA T+      G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWG G  G+LGHG      YPK +     G    +  +SAG+ HS  V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           +G FG+LGHGD  S + P  V      NV +++CG  H++ L KD  G  V+ FG G  G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
           +LG        V  P+V   L  + I  + A    S AL++ G +
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 25/272 (9%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V+ WG  SS QL  G     L PK    F   +     I AG   +  +S  G +  CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
            G++G+LG GD  + S+  K++   ++++ +++       H+L    +    +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485

Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
             G+LG      +    P++  G L    +V +SA    SAA++ +G LYTWG       
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSST 320
           G   ++  N P  +    +  + + G +H + L+ DG  V   GG  +G L   +     
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           +P     + +  L G+ + ++ AG++ S  +T
Sbjct: 604 KP-----KVIEALQGMFIRKVCAGSQSSLALT 630



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G  G+LG G    +  P+L+       V + ++ G  H  A+T       G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
           ++WG G  G+LGHG+      P  V         +  +S G +H+  +S  G  +++ G 
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G  G+LGHGD      P  + +     + ++  G + SL L
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            VS++  ++  G  +  QL  G       P    SF   +   I  G   + V+  D   
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
             V   G G  G+LG+     +S +L ++T   H  I+ V  S   D  + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +WG G        ++S    P+ +   L        + G+ H   +T DGE+   G    
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L   +  S++R +   ++ +SN     V +++ G+ H+                    
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                I +  + R + ++G G++G+LG G+T     PKV+ 
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V DSG ++  G 
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 236

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSP--------SSVIGG------------KVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S         + V GG            ++F  G    G 
Sbjct: 23  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGC 82

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +    G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 83  LGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
            +  +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 198 PTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 313 -DRIIEIAA 320


>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
           KNP414]
 gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
           KNP414]
          Length = 388

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 157/335 (46%), Gaps = 35/335 (10%)

Query: 31  QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q+   VW+WGA ++ QLG G   D  SP  + + +L SV  ++ GGA   A+ S      
Sbjct: 46  QKDGTVWAWGANSNAQLGDGTKTDRYSP--IPVKNLDSVIGISAGGAASFAVRSD----- 98

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G  ++WG    GQLG G   D L P  V       +++  + AG +HS  V   G ++  
Sbjct: 99  GTAWAWGSNLFGQLGDGTTYDRLTPVQVQGL----HSVVALEAGSSHSLAVKADGSVWAW 154

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G  T+GQLG G   S S+PV+V +    +V  +A G  HSL +  D     V+ +G+   
Sbjct: 155 GWNTYGQLGDGTTDSRSTPVQVQAL--DSVVAVAAGSGHSLAVKAD---GSVWAWGANWS 209

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
           GQLG         ++P    GL    +V +SA    S+AL ++G ++ WG   +      
Sbjct: 210 GQLG--DGTYTESTVPVQVTGLG--SVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSE 265

Query: 265 -STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            + S+   P  +    S +  + G ++ L L  DG V   G +  G L +    SS+ P+
Sbjct: 266 TAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPV 325

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHS-AVVTGKFHW 357
                +V+ L    V+ +AAG  H  AV +G   W
Sbjct: 326 -----QVTRLG--SVVSVAAGPLHGLAVQSGGTVW 353



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 90/222 (40%), Gaps = 19/222 (8%)

Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
           AL        D  +  +   + G  HS F+   G ++  G  +  QLG G      SP+ 
Sbjct: 16  ALTANMAVAADRSKTPVEAAAGGTGHSLFLQKDGTVWAWGANSNAQLGDGTKTDRYSPIP 75

Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVT 229
           V +    +V  I+ G   S  +  D      + +GS   GQL  G + DR+  V +    
Sbjct: 76  VKNL--DSVIGISAGGAASFAVRSD---GTAWAWGSNLFGQLGDGTTYDRLTPVQVQ--- 127

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQ 283
            GLH   +V + A    S A+ A+G ++ WG       G  +T   + P  + +  S   
Sbjct: 128 -GLH--SVVALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDSVVA 184

Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            A G  H L +  DG V   G +  G L D     ST P+ V
Sbjct: 185 VAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQV 226



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 10/123 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WGA   GQLG+       SP  + ++ ++S + ++ G  + LAL +      G V++
Sbjct: 251 VWAWGANDSGQLGSETAASN-SPSPVQVTGMASAAAISSGSDYSLALKND-----GTVWA 304

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  SSGQLG+G    +  P  VT       ++  ++AG  H   V   G ++  G+ T+
Sbjct: 305 WGYNSSGQLGNGTTTSSSAPVQVTRLG----SVVSVAAGPLHGLAVQSGGTVWDWGNNTY 360

Query: 156 GQL 158
           GQL
Sbjct: 361 GQL 363


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 145 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 198

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V DSG ++  G 
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 257

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 258 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 314

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 315 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 362



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 47/336 (13%)

Query: 43  TDGQLGTGRLHDELSPQLLNLS------SLSSVSMLACGGAHVLALTSP--------SSV 88
           T G   T R+ +EL P     S      +LSS+ ML  G   + +L S         + V
Sbjct: 18  TKGLPRTVRMEEEL-PLFCGYSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACV 76

Query: 89  IGG------------KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
            GG            ++F  G    G LG G++   + P+ +    G +       +G  
Sbjct: 77  FGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-P 135

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLK 195
           H    +  G +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  
Sbjct: 136 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 195

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D    +V+ +G    GQ+G S   +   +  +VT  L +  +V I+       A+   G 
Sbjct: 196 D---GEVFAWGYNNSGQVG-SGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGE 251

Query: 256 LYTWGR--------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           +Y WG         G +      C  +    +   + A G+ H LVLT +G+V   G + 
Sbjct: 252 VYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 311

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
           +G L    + + + P  V +EK       ++I+IAA
Sbjct: 312 YGQLGTGNKSNQSYPTPVTVEK------DRIIEIAA 341


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 177/466 (37%), Gaps = 115/466 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-------------------VSMLACGG 76
           +++WG G+ G LG G   D  +P  + L S +                    V+  + G 
Sbjct: 202 LYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGA 261

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
            H +A TS      G +++WG G +G+LG G    +L P  V +       I  ++AG +
Sbjct: 262 KHSMACTSD-----GTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDR--DIVFVNAGDS 314

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  +   G L+T G G FG+LGHGD      P KV  F    V Q+ACG  H+L L   
Sbjct: 315 HSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHK 374

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSAEG 254
                V+ +G+G    LG  +    S  +  V   L DIE  ++ I+A    SAA++  G
Sbjct: 375 ---GTVFAWGAGL--ALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG 429

Query: 255 HLYTWGRGFNSTSDVNCPQSLP-------------------------------------- 276
            L  WG G +S       Q+ P                                      
Sbjct: 430 DLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDV 489

Query: 277 --------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
                   SS +      G +H + LTG G V + G +  G L   E V   +   V LE
Sbjct: 490 PGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLE 549

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
             S      + +IA G++H   V                          A+   +  WG 
Sbjct: 550 CFST----PIRRIACGSKHCLAV--------------------------AQYGDVFAWGA 579

Query: 389 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            ++GQLGLG       P  V    +       ++VFCG  ++  I+
Sbjct: 580 NDNGQLGLGVVRPSFEPAAVTALRQ------AVDVFCGDDYSACIT 619



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 180/434 (41%), Gaps = 91/434 (20%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++ WG      LG G  + + + P L+   S      ++CG  +   L   +   GGKV
Sbjct: 69  QLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKV 128

Query: 94  FSWGRGSSGQLGHGE-MVDAL-------------------YPKP--VTFFDGHRYTITHI 131
           +++G G+ G+LG+ +   D +                    PKP  V F D  +  I  I
Sbjct: 129 YTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRD--KCKIARI 186

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKNVHQ-- 182
           S G +H+  +SD G L+  G G++G LG GD     +PV+V       S    +NV    
Sbjct: 187 SCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGK 246

Query: 183 -------IAC---GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
                  + C   G +HS+    D     ++ +G G  G+LG+  +R  S+S P V   +
Sbjct: 247 VRADPVIVTCCSAGAKHSMACTSD---GTLWTWGHGGNGRLGLGHNR-GSLS-PAVVDYI 301

Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQA 284
            D +IV ++A    SA +  +G LYTWG       G     ++  P+ +     +   Q 
Sbjct: 302 LDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQV 361

Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAA 343
           A G  H L LT  G V   G        + E  S      VA+ K +S+++   V+ IAA
Sbjct: 362 ACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM---VAVPKHLSDIEAA-VLNIAA 417

Query: 344 GAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI 403
           G  HSA VT                              ++ WG G   +LG G+  +Q 
Sbjct: 418 GPYHSAAVT--------------------------VGGDLLVWGVGGSSRLGHGDQQNQP 451

Query: 404 HPKVVNLGDEFQNR 417
            PK V    + +NR
Sbjct: 452 FPKYVA---DLRNR 462



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 136/337 (40%), Gaps = 67/337 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG+  DGQLG G   +E   + + L   S+ +  +ACG  H LA+        G VF
Sbjct: 521 VWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQY-----GDVF 575

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVT-------FFDGHRYT--ITHISAGWNHSGFV-SDS 144
           +WG   +GQLG G +  +  P  VT        F G  Y+  IT +    + SG   ++ 
Sbjct: 576 AWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEF 635

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSS---PVKV-----------SSFVNKNVHQIAC----- 185
           G L+  G    G+LG G+  +  S   P KV            S   +   ++ C     
Sbjct: 636 GDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSP 695

Query: 186 ---GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
              G  HSL +       + Y +G+G  G+LG+      +   P        + +  ++A
Sbjct: 696 LCSGTSHSLAITAQ---GECYAWGAGYYGRLGIGT--TANAYTPTRCDFPKGVRLRSVAA 750

Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVN--CPQ---------SLPSSLSFSQAALGWNHV 291
               S ALS +G L+ WGR  ++ S  N   P+          +P   S S +     H 
Sbjct: 751 GACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASE---RHS 807

Query: 292 LVLTGDGEVLMLGGS----------HHGMLSDPERVS 318
           L +T  GEV   G +              L  PERV+
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVA 844



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 141/357 (39%), Gaps = 68/357 (19%)

Query: 47  LGTGRLHDELSP-QLLNLSSLS-------SVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           LG  RL  E S   +L++   S       ++  L CG +H +ALT       G V+ WG 
Sbjct: 472 LGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTG-----AGAVWVWGS 526

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG GE V+    +PV   +     I  I+ G  H   V+  G +F  G    GQL
Sbjct: 527 NDDGQLGLGEDVEEDQYEPVK-LECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQL 585

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG-------------NQVYGF 205
           G G  R    P  V++   +    + CG  +S  +    LG               ++ +
Sbjct: 586 GLGVVRPSFEPAAVTAL--RQAVDVFCGDDYSACITS--LGGAQSVSGETGTEFGDLWAW 641

Query: 206 GSGKRGQLGVSKDRIRS---------VSLPQVTIGLHDIEIVG-----------ISANGD 245
           G+ + G+LG+ +D              S+P     L  +E+             + +   
Sbjct: 642 GAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTS 701

Query: 246 RSAALSAEGHLYTWGRGF------NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGD 297
            S A++A+G  Y WG G+       +T++   P     P  +     A G  H L L+ D
Sbjct: 702 HSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMD 761

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVAL-EKVSNLDGV-KVIQIAAGAEHSAVVT 352
           G++   G          +  S+T  +S  +  ++    GV KV  I+A   HS  VT
Sbjct: 762 GDLWFWGRRE-------DTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVT 811



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 123/328 (37%), Gaps = 88/328 (26%)

Query: 127 TITHISAGWNHS---GFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQ 182
           ++  ++ G  H+   G   D   LF  G      LG G + R    P  V  F      +
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFE 106

Query: 183 IACGMRHSLVLLKDCL--GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
           ++CG  +S VL+K     G +VY FG G RG+LG  K++   V+  Q             
Sbjct: 107 VSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQ------------- 153

Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVL 294
              GD S            G G         P+  PS + F      ++ + G +H L L
Sbjct: 154 ---GDFS------------GDGQEDGPSWFTPK--PSRVRFRDKCKIARISCGADHTLAL 196

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL-------EKVSNL-------DGVKVIQ 340
           + +G +   G   +G L   +   S  P+ V L       +K  N+       D V V  
Sbjct: 197 SDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTC 256

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
            +AGA+HS   T                           +  + TWG G +G+LGLG+  
Sbjct: 257 CSAGAKHSMACT--------------------------SDGTLWTWGHGGNGRLGLGHNR 290

Query: 401 DQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
             + P VV   D   +RD    VF  +G
Sbjct: 291 GSLSPAVV---DYILDRDI---VFVNAG 312



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 18/203 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           + ++WGAG  G+LG G   +  +P   +      +  +A G  H LAL+     + G ++
Sbjct: 711 ECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALS-----MDGDLW 765

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WGR    +       + + P+     +G      +  ISA   HS  V+++G +F  GD
Sbjct: 766 FWGR----REDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGD 821

Query: 153 GTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
               Q G G  ++     P +V+   +     +A G + S  +L      +V+  G  K 
Sbjct: 822 NKLYQTGCGKRQAERLDRPERVAGLPSA-CQWVATGPQGSFFILAS---GEVFAAGVIKS 877

Query: 211 GQLGVSKDRIRSVSLPQVTIGLH 233
           G+LG    + R+     V +  H
Sbjct: 878 GRLGTGWSK-RTYQFSPVAVITH 899



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 59/248 (23%)

Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           +++ F   +V ++A G+ H+LV+       Q++G+G      LG+  + IR    P +  
Sbjct: 39  RIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVE-IRERVFPGLVP 97

Query: 231 GLHDIEIVGISANGDRSAALSAE-----GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
               +    +S   + SA L        G +YT+G G  +   +  P++    ++  Q  
Sbjct: 98  FFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLG--NRGRLGYPKNKADGVAGYQGD 155

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
                    +GDG+             D     + +P      +V   D  K+ +I+ GA
Sbjct: 156 F--------SGDGQ------------EDGPSWFTPKP-----SRVRFRDKCKIARISCGA 190

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
           +H+                            +++  A+  WG G +G LG G+T D   P
Sbjct: 191 DHTLA--------------------------LSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 406 KVVNLGDE 413
             V LG E
Sbjct: 225 VRVYLGSE 232


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 110/226 (48%), Gaps = 10/226 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG G +GQLG G   +  +P ++       V  + CG  H + +     + GG+++
Sbjct: 101 RVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIV-----LAGGELY 155

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G   +GQ G G   D L P+ V    G    + H S G  H+  V+  G +FT G G+
Sbjct: 156 TCGWNKNGQCGVGSTSDLLSPQCVESLRGE--GVQHASCGAGHTAVVTGGGEVFTFGSGS 213

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLGHGD +  S P +V + V   +  +ACG  +++    D   ++V+GFG    GQLG
Sbjct: 214 CGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFD---HRVFGFGLNNVGQLG 270

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            S      +S P+    L + E+     N     AL+  G L  WG
Sbjct: 271 ASSTSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 32/306 (10%)

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG-GKVFSWGRGSSGQLGHGEMVDALYP 115
           +P++L  +    V  +ACG      L   + V+G G+V  WG    GQ G G      +P
Sbjct: 19  TPRMLKKAMGRQVRDVACG------LVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHP 72

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
             V    G       +S G  H+  VS+ G +F+ G G  GQLGHG   + ++P  V + 
Sbjct: 73  TFVGSLFG--VACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAM 130

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             ++V  + CG+ H++++L    G ++Y  G  K GQ GV       +  PQ    L   
Sbjct: 131 RGRDVLAVTCGVGHTVIVLA---GGELYTCGWNKNGQCGVGS--TSDLLSPQCVESLRGE 185

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALG 287
            +   S     +A ++  G ++T+G       G     D++ P+ + +   +  S  A G
Sbjct: 186 GVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACG 245

Query: 288 WNHVLVLTGDGEVLMLG----------GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
             + +    D  V   G           + H  LS+P ++   +   V L K +  + + 
Sbjct: 246 EEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCNQSEVIA 305

Query: 338 VIQIAA 343
           + +  A
Sbjct: 306 LTRRGA 311



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 46/264 (17%)

Query: 155 FGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           +GQ G   G+  S S+P  +   + + V  +ACG+ HS +++      +V  +G  K GQ
Sbjct: 4   WGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGS---GEVLCWGENKYGQ 60

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
            G           P     L  +  + +S  G  +  +S +G +++WG G N      S 
Sbjct: 61  CGTGTQE--QTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSR 118

Query: 267 SDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            ++  P  + +       A+  G  H +++   GE+   G + +G       V ST  L 
Sbjct: 119 DNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCG----VGSTSDL- 173

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
           ++ + V +L G  V   + GA H+AVVTG                             + 
Sbjct: 174 LSPQCVESLRGEGVQHASCGAGHTAVVTG--------------------------GGEVF 207

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVV 408
           T+G G  GQLG G+  D   P+ V
Sbjct: 208 TFGSGSCGQLGHGDCQDLSMPRRV 231



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 40/183 (21%)

Query: 256 LYTWGRGFNSTSD---VNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           +Y WG+  ++  +    + P+ L  ++       A G  H  ++ G GEVL  G + +G 
Sbjct: 1   VYFWGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQ 60

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
                +  +  P  V      +L GV  + ++ G  H+ VV+                  
Sbjct: 61  CGTGTQEQTEHPTFVG-----SLFGVACMSVSCGGAHTVVVS------------------ 97

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
                   E+  + +WG G +GQLG G+  +   P VV      + RD  L V CG G T
Sbjct: 98  --------EDGRVFSWGLGANGQLGHGSRDNLTTPSVVQ---AMRGRDV-LAVTCGVGHT 145

Query: 431 YAI 433
             +
Sbjct: 146 VIV 148


>gi|22202769|dbj|BAC07425.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|125557351|gb|EAZ02887.1| hypothetical protein OsI_25020 [Oryza sativa Indica Group]
 gi|125599227|gb|EAZ38803.1| hypothetical protein OsJ_23206 [Oryza sativa Japonica Group]
          Length = 1073

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 152/338 (44%), Gaps = 42/338 (12%)

Query: 33  VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
            ++V+SWG+GT+ QLGTG  H +  P  ++    S +  +A    H +A++S      G+
Sbjct: 151 AMEVFSWGSGTNYQLGTGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSS-----DGE 205

Query: 93  VFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           +++WG G  G+LGH     G+    + P+ VT   G R  +  ++A  +H+   +++G L
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLG-RKRVNVVAAAKHHTVIATEAGEL 264

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           FT G    GQLG+    +  +P +VSS     +  +A   +HS  +       +V+ +GS
Sbjct: 265 FTWGSNREGQLGYPSVDTQPTPRRVSSL-KARIISVAAANKHSAAVADT---GEVFTWGS 320

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------- 260
            K GQLG       S  +P++   L       +SA    + AL  +G ++TWG       
Sbjct: 321 NKEGQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVALGTDGEVFTWGHRLVTPR 380

Query: 261 -----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                R      + N        L     A G  H  VLT DG +       + + SDP+
Sbjct: 381 RAVISRCLKKGGNTNLKFHRMERLQVISVAAGVMHTTVLTADGAIF------YWVSSDPD 434

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
                    +   ++ ++ G  V+ I+AG   +A+ T 
Sbjct: 435 ---------LRCRQIFSMCGRNVVNISAGKYWTALATA 463



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 50/230 (21%)

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D +  +V+ +GSG   QLG     I+   LP     LH   I  ++A+   S A+S++G 
Sbjct: 148 DSVAMEVFSWGSGTNYQLGTGNAHIQK--LPCKVDALHGSYIKTVAASKFHSVAVSSDGE 205

Query: 256 LYTWGRGFN-----------STSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
           LYTWG G              T+ V  P+ +   L   +    A   +H ++ T  GE+ 
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAGELF 265

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G +  G L  P   +   P      +VS+L   ++I +AA  +HSA V          
Sbjct: 266 TWGSNREGQLGYPSVDTQPTP-----RRVSSLKA-RIISVAAANKHSAAV---------- 309

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                           A+   + TWG  + GQLG G  N+     P++V 
Sbjct: 310 ----------------ADTGEVFTWGSNKEGQLGYGTSNSASNCIPRMVE 343


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  ++   P+ VT    ++  +T I+ G      V DSG ++  G 
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 236

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 23  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +    G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 83  LGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   I  
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTINQ 197

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 313 -DRIIEIAA 320


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 28/318 (8%)

Query: 8   ETEKGKSALINNAKPKIEEEEEEQQVV----KVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
           E   GK    N+    +   +E   VV    K++ +G+   GQLG G       P  +  
Sbjct: 24  ENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKA 83

Query: 64  SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
                V + ACG  H L  T      GG V++ G  + GQLG G+  +      ++FF  
Sbjct: 84  LKPEKVKLAACGRNHTLVSTE-----GGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138

Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
             + I  +SAG N S  +++ G LF  GD + GQ+G  +  +   P +V+  + K V  I
Sbjct: 139 -EHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWI 195

Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           +CG  HS  +  D    ++Y FG  + G+LG+    + +   PQ+   + + +++ ++  
Sbjct: 196 SCGYYHSAFVTTD---GELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251

Query: 244 GDRSAALSAEGHLYTWGRG----------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
           G+ +  L+ E  +YT+G G             TS+    +++    + S  + G NH  +
Sbjct: 252 GEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-TISYISCGENHTAL 309

Query: 294 LTGDGEVLMLGGSHHGML 311
           +T  G +   G   HG L
Sbjct: 310 ITDIGLMYTFGDGRHGKL 327



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +   +    TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIE--NIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG  ++GQ+G   + +   PQ + +     VS ++CG  H   +T+      G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +G   +G+LG    +   +  P    +     I  ++ G  H+  ++++  ++T G G 
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           FGQLG G +   +S P  + +  ++ +  I+CG  H+ ++    L   +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327

Query: 214 GVSKDRIRSVSLPQV 228
           G+  +   +  +P +
Sbjct: 328 GLGLENFTNHFIPTL 342


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  ++   P+ VT    ++  +T I+ G      V DSG ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +    G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 78  LGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   I  
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTINQ 192

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 308 -DRIIEIAA 315


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 122 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 175

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 234

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 235 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 291

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 292 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 339



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 21  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 80

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 81  LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 139

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 140 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 195

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 196 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 255

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 256 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 310

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 311 -DRIIEIAA 318


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 133/293 (45%), Gaps = 33/293 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG    G+LG     D   P  ++      +  + CG       +S       KVF
Sbjct: 233 KLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCG-----MYSSACISHDMKVF 287

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG GS GQLGH E  D   P+ V     H   I  ++ G+ H   +S  G ++T G+G 
Sbjct: 288 TWGSGSKGQLGHVEKSDEWLPRSVAAL--HHIPIVQVALGYEHMAALSLDGDVYTWGEGE 345

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQI---------ACGMRHSLVLLKDCLGNQVYGF 205
            GQLGHGD  S S+P K+   +     ++         ACG   +L+L       ++  F
Sbjct: 346 HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTD---YGRLISF 402

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----- 260
           G  + G LG+ + R+ +      +  +     V +SA  +  AA++++G++YTWG     
Sbjct: 403 GMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFG 462

Query: 261 -------RGFNSTSDVNCPQSLPSSLSFSQAA--LGWNHVLVLTGDGEVLMLG 304
                  R +++  D   P  L   L     A   G N+ ++L+ DG VL+LG
Sbjct: 463 AVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVLVLG 515



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 127/280 (45%), Gaps = 27/280 (9%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F+WG   + QLG G+     +PK V+        I  +S G +H   +  +G LFT G 
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              G+LG    +    P +V    ++ +  + CGM  S  +  D    +V+ +GSG +GQ
Sbjct: 240 CDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDM---KVFTWGSGSKGQ 296

Query: 213 LG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SD 268
           LG V K       LP+    LH I IV ++   +  AALS +G +YTWG G +      D
Sbjct: 297 LGHVEKS---DEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD 353

Query: 269 VN---CPQSLPSSLSFSQA-----------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
           +N    P+ L   L  +             A G +  L+LT  G ++  G S  G L   
Sbjct: 354 LNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLG 413

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           E+  + RP    L     +D  + + ++AG EH A VT K
Sbjct: 414 EKRLAARP---HLITSRIMDKRRFVHLSAGDEHCAAVTSK 450



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 81/213 (38%), Gaps = 44/213 (20%)

Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGW 288
           I+ +S   D  AA+ + G L+TWG       G  S  DV  P  +             G 
Sbjct: 215 IIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGM 274

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
                ++ D +V   G    G L   E+     P SVA      L  + ++Q+A G EH 
Sbjct: 275 YSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVA-----ALHHIPIVQVALGYEHM 329

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPK 406
           A                           ++ +  + TWG GEHGQLG G  N+C      
Sbjct: 330 AA--------------------------LSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKL 363

Query: 407 VVNLGD---EFQNRDTQLEVFCGSGFTYAISRH 436
           ++ L +   E  +  + + + CG+  T  ++ +
Sbjct: 364 LLELENTTGEVADVGSPVLLACGASVTLILTDY 396


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 118/224 (52%), Gaps = 16/224 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V + G G+ G+LG G  +++   + LN   S ++ +S       H LALTS      G+V
Sbjct: 427 VRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSE-----GQV 481

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           FSWG G  G+LGHG  +   YPK +      +  +  ISAG+ HS  V+D G L+T G+G
Sbjct: 482 FSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVC-ISAGYRHSACVTDDGQLYTWGEG 540

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +G+LGHGD  S + P  V      NV ++ CG  H++ + +D     V+ FG G  G+L
Sbjct: 541 DYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQD--SRTVWSFGGGDNGKL 596

Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
           G    +RI    + +  IGL  I+ VG  +    S AL++ G +
Sbjct: 597 GHGDTNRIYKPKIIESLIGLF-IKKVGCGSQS--SLALTSTGQV 637



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 26/277 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG+ +  QL  G     L P++    S +    +  G      ++S      G V 
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKILLPKMA--ISFAESQQIEAGQYCTFVISS-----DGSVR 428

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G+GS G+LG G+  +    K + F +     I+       H+  ++  G +F+ GDG 
Sbjct: 429 ACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGD 488

Query: 155 FGQLGHGDYRSHSSP-VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +G+LGHG+  +   P V +   + K V  I+ G RHS  +  D    Q+Y +G G  G+L
Sbjct: 489 YGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDD---GQLYTWGEGDYGRL 545

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN------S 265
           G      R+V  P +   + D+  VG +      + A+S +   ++++G G N       
Sbjct: 546 GHGDSNSRNV--PTL---VKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD 600

Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEV 300
           T+ +  P+ + S   L   +   G    L LT  G+V
Sbjct: 601 TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 48/283 (16%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           +S  VS++  +F  G  +  QL  G       P    SF      QI  G   + V+  D
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAES--QQIEAGQYCTFVISSD 424

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGH 255
                V   G G  G+LG+  D      L ++      I  +  S   D  + AL++EG 
Sbjct: 425 ---GSVRACGKGSYGRLGLG-DSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 256 LYTWGRG------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGS 306
           +++WG G        +T     P+ +   L        + G+ H   +T DG++   G  
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
            +G L   +  S++R +   ++ VSN     V ++  G+ H+                  
Sbjct: 541 DYGRLGHGD--SNSRNVPTLVKDVSN-----VGKVVCGSSHT------------------ 575

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                  I V  ++R + ++G G++G+LG G+T     PK++ 
Sbjct: 576 -------IAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIE 611


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 141/313 (45%), Gaps = 40/313 (12%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           K+++WG    G LG       E +P L+   +   +   A GG H LA+        G+ 
Sbjct: 58  KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQ-----GRA 112

Query: 94  FSWGRGSSGQLGH-------GEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           ++WG    GQ G        G  V  D + PK        + T+  ++AG  HS  ++  
Sbjct: 113 YAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA----QQLTVRQVAAGGTHSVVLTRE 168

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G ++T G         GD +  S PV+V     +NV  IA G  H+L L +D     ++ 
Sbjct: 169 GYVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKED---GTLWA 219

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
           +G+ + GQLG    + RS  +P    GL D+ +V I+A G  S AL+ EG +Y WGRG  
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEH 277

Query: 264 -------NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                  N  S    PQ  +L +     Q + G  H + LT DG +   G   HG L   
Sbjct: 278 GRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337

Query: 315 ERVSSTRPLSVAL 327
            +V++ +PL + +
Sbjct: 338 RKVTTGQPLELPI 350



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 155/363 (42%), Gaps = 70/363 (19%)

Query: 93  VFSWGRGSSGQLGHG--------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           V +WG G  GQLG G         +VDAL P          + +  +  G  +S  + D 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEP----------FNVRSVVGGSRNSLAICDD 56

Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           G LFT G    G LGH  + ++ S+P  V S  N  + Q A G  H L +  D  G + Y
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAV--DDQG-RAY 113

Query: 204 GFGSGKRGQLG--VSKDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
            +G  + GQ G   SKD       R + +P+       + +  ++A G  S  L+ EG++
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSVVLTREGYV 171

Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
           +TWG+ +       ++ P  +    +    A+G  H L L  DG +   G + +G L   
Sbjct: 172 WTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG-- 229

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                T+P S  +  V  LD + ++ IAAG  HS  +T +                    
Sbjct: 230 --TGDTQPRSYPI-PVQGLDDLTLVDIAAGGWHSTALTNEGE------------------ 268

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                   +  WG GEHG+LG G+     ++ P+ VNL       D  ++V CG   + A
Sbjct: 269 --------VYGWGRGEHGRLGFGDNDKSSKMLPQKVNL---LAGEDI-IQVSCGGTHSVA 316

Query: 433 ISR 435
           ++R
Sbjct: 317 LTR 319



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 157/385 (40%), Gaps = 65/385 (16%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG+G DGQLG G   ++    +++     +V  +  G  + LA+        GK+F+WG
Sbjct: 9   AWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDD-----GKLFTWG 63

Query: 98  RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
               G LGH  E      P  V      +     I  GW H   V D G  +  G   +G
Sbjct: 64  WNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121

Query: 157 QLGHGDYRSHS-SPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           Q G    +  +  PV+    + K       V Q+A G  HS+VL ++     V+ +G   
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWTWG--- 175

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
             Q     D I+ +S+P    GL ++ ++ + A    + AL  +G L+ WG    G   T
Sbjct: 176 --QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGT 230

Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            D   P+S P        L+    A G  H   LT +GEV   G   HG L   +   S+
Sbjct: 231 GDTQ-PRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSS 289

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
           + L    +KV+ L G  +IQ++ G  HS  +T                           +
Sbjct: 290 KMLP---QKVNLLAGEDIIQVSCGGTHSVALT--------------------------RD 320

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHP 405
             I ++G G+HG+LG G       P
Sbjct: 321 GRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +W+WG    GQLGTG       P  +  L  L+ V  +A GG H  ALT+      G+V+
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNE-----GEVY 270

Query: 95  SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WGRG  G+LG G+      + P+ V    G    I  +S G  HS  ++  G +F+ G 
Sbjct: 271 GWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGE--DIIQVSCGGTHSVALTRDGRIFSFGR 328

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKN----------------VHQIACGMRHSLVLLK 195
           G  G+LG+G   +   P+++   +                      +ACG RH+L +++
Sbjct: 329 GDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 14/206 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    GQLG GR      +PQ++   +   ++ ++ G AH +AL+     + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEAHSMALS-----MSGNI 212

Query: 94  FSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +SWG+   GQLG  H E  D+  P  +   D  +  +  ++ G +H+  ++  G LFT G
Sbjct: 213 YSWGKNEFGQLGLDHTESKDS--PSLIEALDNQK--VEFLACGGSHTALLTQDGLLFTFG 268

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G  GQLGH   ++   P  V+      V QIACG  H+L  + D LG +V+ FGSGK G
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKEG 326

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEI 237
           QLG    R + + LP       D++ 
Sbjct: 327 QLGNGGTRDQLIPLPMKVSSNEDLKF 352



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 47/254 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLGV + +  S + PQ+   L  I +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTAPQIVEHLAGIPL 193

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
             ISA    S ALS  G++Y+WG+      G + T   + P SL  +L   +    A G 
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSP-SLIEALDNQKVEFLACGG 252

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG +   G   HG L      +  RP  VA      L G +V QIA G  H+
Sbjct: 253 SHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELAGNRVTQIACGRWHT 307

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T DQ+ P  +
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM 342

Query: 409 NLGDEFQNRDTQLE 422
            +     N D + E
Sbjct: 343 KVSS---NEDLKFE 353



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 38/296 (12%)

Query: 34  VKVWSWGAGTDGQL-----GTGRLHDELSPQLLNLSSL---SSVSMLACGGAHVLALTSP 85
           +K+ S   G D  L     G    +D  S + L   S+     +  + CG  H LAL+  
Sbjct: 97  MKIHSMDLGADHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK- 155

Query: 86  SSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
               GG++F+WG+   GQLG G +      P+ V    G    +  ISAG  HS  +S S
Sbjct: 156 ----GGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAG--IPLAQISAGEAHSMALSMS 209

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G +++ G   FGQLG     S  SP  + +  N+ V  +ACG  H+ +L +D L   ++ 
Sbjct: 210 GNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGL---LFT 266

Query: 205 FGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGR 261
           FG+GK GQLG   +++ +R    P +   L    +  I+     + A  ++ G ++++G 
Sbjct: 267 FGAGKHGQLGHNSTQNELR----PCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGS 322

Query: 262 GFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G         T D   P  LP  +S ++     +H    T + E++M+ G +  +L
Sbjct: 323 GKEGQLGNGGTRDQLIP--LPMKVSSNEDLKFESH----TSEKELIMIAGENQSIL 372


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 312



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +   +G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G S   +      +VT  L +  +V I+       A+   G +Y WG     
Sbjct: 153 GYNNSGQVG-SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 272 NQSYPTPVTVEK------DRIIEIAA 291


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 312



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +   +G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G S   +      +VT  L +  +V I+       A+   G +Y WG     
Sbjct: 153 GYNNSGQVG-SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 272 NQSYPTPVTVEK------DRIIEIAA 291


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 78  LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 308 -DRIIEIAA 315


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 27/289 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
           KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 50  KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 103

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           GKVF WG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 104 GKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 161

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
           G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 162 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 218

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
             G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G      
Sbjct: 219 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 276

Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
             SDV+   PQ +           A+G  H L +T  G+V   G + HG
Sbjct: 277 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG 325



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 137/324 (42%), Gaps = 24/324 (7%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG     QLG  +      P      S  +V  +A G   + A+T     + GKV++ G 
Sbjct: 2   WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----VEGKVYACGE 56

Query: 99  GSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
            ++G+LG G     +  P+ +T    +      + +G  H+  ++  G +F  G+G  G+
Sbjct: 57  ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGK 116

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LGH    +   P  + +   K +  IACG  HS  L       ++Y +G G+ G+LG   
Sbjct: 117 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS---GELYTWGLGEYGRLGHGD 173

Query: 218 DRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
           +  +    + +V +G H +  V   +   ++ AL+ EG +++WG       G   +   N
Sbjct: 174 NTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 232

Query: 271 CPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
            PQ++   +     Q   G    L LT  G V   G   +  L     V   +P     +
Sbjct: 233 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP-----Q 287

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT 352
            V  L G K++ +A GA H   VT
Sbjct: 288 VVEGLRGKKIVHVAVGALHCLAVT 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG G  G+LG G       PQ +   +   V  + CG    LALT       G V++
Sbjct: 212 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS-----GVVWT 266

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG+G   +LGHG  V    P+ V    G +  I H++ G  H   V+DSG ++  GD   
Sbjct: 267 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKK--IVHVAVGALHCLAVTDSGQVYAWGDNDH 324

Query: 156 GQLG 159
           GQ G
Sbjct: 325 GQQG 328



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 119/285 (41%), Gaps = 55/285 (19%)

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLK 195
           V+  G ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  
Sbjct: 45  VTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTV 102

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D    +V+ +G G  G+LG    R+ +   P++   L    I  I+     SAAL++ G 
Sbjct: 103 D---GKVFWWGEGDDGKLG-HFSRM-NCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 157

Query: 256 LYTWGRGF-------NSTSDVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLG 304
           LYTWG G        ++T+ +  P+ +   L     Q A G      L LT +G V   G
Sbjct: 158 LYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 216

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
               G L          P     + +  L+G  V QI  GA+ S  +T            
Sbjct: 217 DGDFGKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT------------ 259

Query: 365 YTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                         ++  + TWG G++ +LG G+      P+VV 
Sbjct: 260 --------------KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE 290



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 50/219 (22%)

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQS 274
            + +P  +  L  + +V ++       A++ EG +Y  G   N       S+  V  P+ 
Sbjct: 17  KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQ 76

Query: 275 LP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           +   SS    + A+  G  H   LT DG+V   G    G L    R++  +P  +   K 
Sbjct: 77  ITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKT 136

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
                 ++  IA G+ HSA +T                           +  + TWG GE
Sbjct: 137 K-----RIRDIACGSSHSAALT--------------------------SSGELYTWGLGE 165

Query: 391 HGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 427
           +G+LG G+   Q+ PK+V   LG         ++V CGS
Sbjct: 166 YGRLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 198


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 11/226 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G  T GQLG G   D  +P+++ +  LSSV  +A G +++L++T       G V+S
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEV--LSSVVQIAAGPSYILSVTE-----NGTVYS 289

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G++  LGHGE  D L P+ +  F      I  +SAG  H+  +  +G ++T G G  
Sbjct: 290 FGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYC 349

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G LGHGD    ++P  ++S  N+ V Q+    R + VL+       VYGFGS   G LG 
Sbjct: 350 GALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDS---GSVYGFGSMGFGSLGF 406

Query: 216 SKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
              R+   V  P++   L    +  IS     +  +++ G ++ +G
Sbjct: 407 LDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFG 452



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 22/253 (8%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V++ G  + GQLGHG+  D   PK +        ++  I+AG ++   V+++G +++ 
Sbjct: 235 GHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS----SVVQIAAGPSYILSVTENGTVYSF 290

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G G    LGHG+      P  +  F  K +H  +++ G  H++ L  +     VY +G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSN---GYVYTWGKG 347

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNS-- 265
             G LG   D I   + P++   L +  +V + A   ++  L   G +Y +G  GF S  
Sbjct: 348 YCGALG-HGDEIEKTT-PELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLG 405

Query: 266 ------TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                 +  V  P+ L +  +   SQ + G  H +V+T  G++   G +    L      
Sbjct: 406 FLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILR 465

Query: 318 SSTRPLSVALEKV 330
           S   P  + ++ V
Sbjct: 466 SCLEPTEIFIKDV 478



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 34/309 (11%)

Query: 55  ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDAL 113
           E S Q++  SS +    +  G  H L +++ S      V+S G G  G LG G E    +
Sbjct: 101 EQSSQMVETSSGNM--QITTGKYHTLLISNSS------VYSCGSGLCGVLGQGSETTQCV 152

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKV 172
               + F    R  + H+SA +NH+ FV  SG +FTCGD +    GH D  R    P  V
Sbjct: 153 AFTRIDFPPLAR--VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLV 210

Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
            S       Q+A G+  ++ L +      VY  G+   GQLG    + R    P++   L
Sbjct: 211 ESLKGIPCKQVAAGLNFTVFLTRK---GHVYTCGTNTHGQLGHGDTQDRPT--PKMIEVL 265

Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP----SSLSFS 282
               +V I+A      +++  G +Y++G G N         D   P+++       +   
Sbjct: 266 SS--VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIV 323

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
           + + G  H + L  +G V   G  + G L   + +  T P     E +++L    V+Q+ 
Sbjct: 324 RVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTP-----ELLTSLKNQLVVQVC 378

Query: 343 AGAEHSAVV 351
           A    + V+
Sbjct: 379 ARKRKTFVL 387



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 60/192 (31%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGKV 93
           V+S+G+G +  LG G  HDEL P+ +       + ++  + G  H +AL S      G V
Sbjct: 287 VYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDS-----NGYV 341

Query: 94  FSWGRGSSGQLGHGEMVDALYP-------------------------------------- 115
           ++WG+G  G LGHG+ ++   P                                      
Sbjct: 342 YTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGF 401

Query: 116 ---------------KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
                          KP        + ++ IS G  H+  ++  G +F  GD    QLGH
Sbjct: 402 GSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGH 461

Query: 161 GDYRSHSSPVKV 172
              RS   P ++
Sbjct: 462 DILRSCLEPTEI 473


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 78  LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 308 -DRIIEIAA 315


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 176/405 (43%), Gaps = 61/405 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG   DGQLG G       P  + +  LS +  +A G +H LAL        G V++
Sbjct: 215 VWAWGENYDGQLGDGTTVTRRVP--VPIQGLSGIVAVASGTSHSLALR-----YDGNVWA 267

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   SGQLG G  +    P  VT   G    I  +  G ++S  V   G ++T G  T+
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVTELSG----IVSVEGGPDYSMAVRYDGTVWTWGINTY 323

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   + S PV+ S      V  +A G  H+L +  +   N ++ +G    GQ G 
Sbjct: 324 GQLGDGTTIARSVPVQTSGL--SGVVAVAAGRTHALAMRAN---NSIWAWGGNVNGQRG- 377

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  RSV     TI L+  E+V ++A  D S A+ ++G L+ WG       G  +T + 
Sbjct: 378 --DESRSVYFSPRTI-LN--EVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNR 432

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P  +  ++     A G  H L +  DG +   G +  G L D    S T P+     +
Sbjct: 433 WAPAEVLGNVV--SVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM-----Q 485

Query: 330 VSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFINVIAENR 381
           V  + G+    +AAG+++S  +         G+  + +L   +      P  +  ++   
Sbjct: 486 VPGISGIA--SVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQGLSGIV 543

Query: 382 AIMT--------------WGWGE--HGQLGLGNTCDQIHPKVVNL 410
           AI T              W WG+   GQLG G T ++  P  V +
Sbjct: 544 AIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQV 588



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 152/379 (40%), Gaps = 61/379 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG   DGQLG G L     P  + +  LS V+ +A G  H LAL        G V++
Sbjct: 115 VWAWGRNDDGQLGDGTLSTRGDP--VQVQGLSGVTTVALGATHSLAL-----CYDGSVWA 167

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G  +    P+ V         +  ++AG NHS  V   G ++  G+   
Sbjct: 168 WGANDHGQLGDGTSIARRTPQMVAGLQ----EVVAVAAGANHSLAVLSDGTVWAWGENYD 223

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   +   PV +       +  +A G  HSL L  D  GN V+ +GS   GQLG 
Sbjct: 224 GQLGDGTTVTRRVPVPIQGL--SGIVAVASGTSHSLALRYD--GN-VWAWGSNYSGQLGD 278

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSD-VNCPQ 273
                RS S  QVT       IV +    D S A+  +G ++TWG   +    D     +
Sbjct: 279 GSSLSRS-SPVQVT---ELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIAR 334

Query: 274 SLPSSLS----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           S+P   S        A G  H L +  +  +   GG+ +G   D  R     P ++  E 
Sbjct: 335 SVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTILNE- 393

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
                   V+ +AA  +HS  V                            +  +  WG  
Sbjct: 394 --------VVTMAATNDHSLAVR--------------------------SDGGLWAWGAN 419

Query: 390 EHGQLGLGNTCDQIHPKVV 408
             GQLG G T ++  P  V
Sbjct: 420 NEGQLGDGTTKNRWAPAEV 438



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 172/405 (42%), Gaps = 63/405 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            VW+WGA   GQLG G      +PQ++  + L  V  +A G  H LA+ S      G V+
Sbjct: 164 SVWAWGANDHGQLGDGTSIARRTPQMV--AGLQEVVAVAAGANHSLAVLSD-----GTVW 216

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG G  V    P P+    G    I  +++G +HS  +   G ++  G   
Sbjct: 217 AWGENYDGQLGDGTTVTRRVPVPIQGLSG----IVAVASGTSHSLALRYDGNVWAWGSNY 272

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   S SSPV+V+      +  +  G  +S+ +  D     V+ +G    GQLG
Sbjct: 273 SGQLGDGSSLSRSSPVQVTEL--SGIVSVEGGPDYSMAVRYD---GTVWTWGINTYGQLG 327

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
                 RSV  P  T GL    +V ++A    + A+ A   ++ WG      RG  S S 
Sbjct: 328 DGTTIARSV--PVQTSGLSG--VVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSV 383

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P+++ + +  + AA   +H L +  DG +   G ++ G L D     +T+      E
Sbjct: 384 YFSPRTILNEV-VTMAATN-DHSLAVRSDGGLWAWGANNEGQLGD----GTTKNRWAPAE 437

Query: 329 KVSNLDGVKVIQIAAGAEHSAVV--------------------TGKFHWVRLFI-----I 363
            + N     V+ +AAG  HS  V                    TG    + + +     I
Sbjct: 438 VLGN-----VVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPMQVPGISGI 492

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +       + +  +  +R +  WG   +GQLG G T ++  P  V
Sbjct: 493 ASVAAGSDYSV-ALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRV 536



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 24/226 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +W+WG   +GQ G        SP+ +    L+ V  +A    H LA+ S      G ++
Sbjct: 364 SIWAWGGNVNGQRGDESRSVYFSPRTI----LNEVVTMAATNDHSLAVRSD-----GGLW 414

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQLG G   +   P  V         +  ++AG  HS  V D G L+  G  T
Sbjct: 415 AWGANNEGQLGDGTTKNRWAPAEVLG------NVVSVAAGRRHSLAVRDDGSLWAWGSNT 468

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   S + P++V       +  +A G  +S+ L  D     ++ +G    GQLG
Sbjct: 469 VGQLGDGTGSSRTIPMQVPGI--SGIASVAAGSDYSVALRYD---RTLWAWGENSYGQLG 523

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                 R V  P    GL    IV I+       A+ + G ++ WG
Sbjct: 524 DGTTVNRHV--PTRVQGLSG--IVAIATGNGHMLAVRSNGTVWAWG 565



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 18/243 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG  + GQLG G   +   P    +  LS +  +A G  H+LA+ S      G V++
Sbjct: 511 LWAWGENSYGQLGDGTTVNRHVPT--RVQGLSGIVAIATGNGHMLAVRS-----NGTVWA 563

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  SSGQLG G  ++   P  V    G        +    HS  V   G L+  G    
Sbjct: 564 WGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGAA----HSLAVRYDGTLWAWGINNT 619

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            QLG G       P +V      +   ++    HSL +L D     ++ +G+   GQLG 
Sbjct: 620 SQLGDGTGIPRLVPTQVQGI--GSAVAVSAAKHHSLAVLAD---GTLWDWGANNYGQLGR 674

Query: 216 SKDRIRSVSLPQVTI-GLHD-IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
           ++D          T+ G+ + +   G S     S AL ++G+L  WG           P+
Sbjct: 675 NQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPE 734

Query: 274 SLP 276
           ++P
Sbjct: 735 NIP 737



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 43/177 (24%)

Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNH 290
           +V I +  D S A+ ++G ++ WGR      G  + S    P  +      +  ALG  H
Sbjct: 96  MVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGLSGVTTVALGATH 155

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            L L  DG V   G + HG L D   ++   P  VA  +       +V+ +AAGA HS  
Sbjct: 156 SLALCYDGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQ-------EVVAVAAGANHS-- 206

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH--GQLGLGNTCDQIHP 405
                                  + V+++      W WGE+  GQLG G T  +  P
Sbjct: 207 -----------------------LAVLSDG---TVWAWGENYDGQLGDGTTVTRRVP 237


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 185/411 (45%), Gaps = 73/411 (17%)

Query: 50  GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
           G L D L P+LL  + +  V  ++ GG H   +T       G++FSWG+G  G+LGH   
Sbjct: 303 GMLVDALLPKLLESTMMLDVQSISLGGKHAALITK-----HGEIFSWGQGKCGRLGHKIN 357

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS- 168
           +D  +PK V   +G       ++ G   +  ++ +G ++T GD  FG     +  S S  
Sbjct: 358 MDLDHPKLVDSLNG--IAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRW 415

Query: 169 -PVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
            P K+S  +   ++  +ACG  H+ V+   C   +++ +G G  G LG     + S+S P
Sbjct: 416 LPQKLSGPLKGISISNVACGEWHTAVV-SAC--GRLFTYGDGTFGALG--HGNLISLSQP 470

Query: 227 QVTIGLHDIEIVGISANGDRSAAL-----------SAEGHLYTWGRGFNST--SDVNCPQ 273
           +    L+ + +  ++     +AA+           SA G L+TWG G         N  +
Sbjct: 471 KEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERK 530

Query: 274 SLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            LP+ ++      F+Q + G    + LT  G V  +G S HG L +     S+R  SVA+
Sbjct: 531 LLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGN----LSSRDASVAI 586

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +   L    V  I++G+ H A +T                              + TWG
Sbjct: 587 VE-GKLKEEFVKAISSGSYHVASLTS--------------------------TGRVYTWG 619

Query: 388 WGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            G HGQLGLG++ D+  P  V  LGD+      Q+E + CGS FT AI  H
Sbjct: 620 KGAHGQLGLGDSDDRNLPTFVEALGDK------QVESIACGSNFTAAICLH 664


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 312



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +   +G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G S   +      +VT  L +  +V I+       A+   G +Y WG     
Sbjct: 153 GYNNSGQVG-SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 272 NQSYPTPVTVEK------DRIIEIAA 291


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 23  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQAWVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 83  LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 313 -DRIIEIAA 320


>gi|350419254|ref|XP_003492121.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Bombus impatiens]
          Length = 727

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 176/397 (44%), Gaps = 68/397 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVIG 90
           + SWGA + GQLG G   +E + P  ++LS  S     +  +  G  H L L        
Sbjct: 5   LMSWGANSHGQLGQGIESEECVLPCEVDLSKCSLEPKKIKKIVGGAGHTLILDD-----S 59

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G+V+S G  + GQ+G       L  + +     ++  I  I+ GW+ S  ++  G L   
Sbjct: 60  GRVYSCGWNNKGQVGFPTKDSILSFRELNEKLKNK-VIVDIACGWDCSAALTIEGTLLLW 118

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG        +         + +  I+ G+RH+++L +DC   ++   G+G +
Sbjct: 119 GSNRFGQLGKHPNSLQWTHEPFEVVTGRKIKGISMGLRHTVLLTEDC---KILVAGTGSK 175

Query: 211 GQLGVS----KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
           GQLG+S    K  + +       + L DIE   +S     + A++ +G++Y +G      
Sbjct: 176 GQLGLSFSNSKGSLNAAYSFTEVLTLSDIE--SVSCGQYHTIAVAKDGNIYAFGDNKYGQ 233

Query: 262 -GFNSTSDVNCPQS-LPSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSHHGMLSD 313
            G N+ +   CP++ +P  LS  Q  L      GW+HV+VL  D  +   G + +G L  
Sbjct: 234 LGLNTDA---CPKTFIPIKLSDVQFKLPINMYSGWSHVIVL-NDNNIFGWGRNTYGQLGI 289

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
              +   +P      ++ NL   KV +++AG+EH+  +T                     
Sbjct: 290 ---IKLEKPSIWKATRIENLP--KVHRVSAGSEHNVALT--------------------- 323

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                EN  I+ WGW EHG  G G+T D   P+ + L
Sbjct: 324 -----ENGEILCWGWNEHGNCGNGHTKDVKFPEQLVL 355



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++ WG  T GQLG  +L      +   + +L  V  ++ G  H +ALT       G++  
Sbjct: 276 IFGWGRNTYGQLGIIKLEKPSIWKATRIENLPKVHRVSAGSEHNVALTE-----NGEILC 330

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
           WG    G  G+G   D  +P+ +     + YT   I +G  HS
Sbjct: 331 WGWNEHGNCGNGHTKDVKFPEQLVL--PYNYTGILIGSGAAHS 371


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +   +G +       +G  H    +  G 
Sbjct: 61  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G S   +      +VT  L +  +V I+       A+   G +Y WG     
Sbjct: 177 GYNNSGQVG-SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 296 NQSYPTPVTVEK------DRIIEIAA 315


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 23  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 83  LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 313 -DRIIEIAA 320


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++SWG    GQLG GR    +E  P+ ++      ++++ACG  H + LT PS    G 
Sbjct: 214 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-PS----GT 268

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF WGR S GQLG  +  D L+P  +      R  I H+  G NH+  ++  G +FT G 
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQR--IKHVCCGENHTAALTADGGVFTFGA 326

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           GT+GQLGHG   + + P +V   +   + Q++CG  H++         ++Y FG G  GQ
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQ--SGRLYIFGLGMSGQ 384

Query: 213 LGVSKDRIRSVSLPQVTIGL 232
           LG     + S +LP    GL
Sbjct: 385 LG--NGTLESSALPVTVPGL 402



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 154/378 (40%), Gaps = 58/378 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELS-------PQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
           ++SWG G +G+LG  +  D +        P+ +      +V  +ACG  H L L +    
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA---- 108

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G V+S G    GQLG    +  L  + V     H   I  ++ G  HS  +SD+G +F
Sbjct: 109 -NGSVYSCGANDFGQLGQDRSMRKL--EQVAALSAHE--IRAVACGEAHSLALSDAGQVF 163

Query: 149 TCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           + G    GQLG G +  S   P  +      ++ QIACG  H L L  +    +++ +G 
Sbjct: 164 SWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANN---GELFSWGG 220

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
              GQLG+ +D   +  LP+    L  + +  ++     S  L+  G ++ WGR      
Sbjct: 221 NASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQL 280

Query: 262 GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G +   D   P  L    S        G NH   LT DG V   G   +G L    +V+ 
Sbjct: 281 GLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNE 340

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P      +V  L G  + Q++ G  H+              ++Y P           +
Sbjct: 341 AVP-----RRVVELMGTAISQLSCGRCHT--------------VAYAP-----------Q 370

Query: 380 NRAIMTWGWGEHGQLGLG 397
           +  +  +G G  GQLG G
Sbjct: 371 SGRLYIFGLGMSGQLGNG 388



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 140/336 (41%), Gaps = 62/336 (18%)

Query: 93  VFSWGRGSSGQLGHGEMVDAL-------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           ++SWG G +G+LG  +  D +        P+ V  F G R  +  ++ G  H+  +  +G
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRF-GTR-AVREVACGHKHTLVLLANG 110

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            +++CG   FGQLG    RS     +V++     +  +ACG  HSL L       QV+ +
Sbjct: 111 SVYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGEAHSLALSD---AGQVFSW 165

Query: 206 GSGKRGQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--- 259
           G  + GQLG     + R+R    P+V   L  + IV I+       AL+  G L++W   
Sbjct: 166 GCNRNGQLGCGTEEESRLR----PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 221

Query: 260 -----GRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                G G +ST +   P+ +     +  +  A G  H + LT  G V + G +  G L 
Sbjct: 222 ASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLG 281

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             ++     P       +  L   ++  +  G  H+A +T                    
Sbjct: 282 LSDQRDRLHPTV-----LKPLRSQRIKHVCCGENHTAALTA------------------- 317

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                  +  + T+G G +GQLG G   ++  P+ V
Sbjct: 318 -------DGGVFTFGAGTYGQLGHGVKVNEAVPRRV 346



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 55/280 (19%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S P +V  F  + V ++ACG +H+LVLL +     VY  G+   GQLG    + RS+   
Sbjct: 80  SQPERVRRFGTRAVREVACGHKHTLVLLAN---GSVYSCGANDFGQLG----QDRSMRKL 132

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC---------PQSLP- 276
           +    L   EI  ++     S ALS  G +++WG   N    + C         P+ +  
Sbjct: 133 EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG--CNRNGQLGCGTEEESRLRPKVIKK 190

Query: 277 -SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
            ++L   Q A G  H L L  +GE+   GG+  G L      +    L     +VS+L G
Sbjct: 191 LATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLP---RRVSHLVG 247

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
           V +  +A GA HS              +  TP            +  +  WG    GQLG
Sbjct: 248 VPLALVACGAMHS--------------VGLTP------------SGTVFVWGRNSCGQLG 281

Query: 396 LGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 434
           L +  D++HP V+        R  +++ V CG   T A++
Sbjct: 282 LSDQRDRLHPTVLK-----PLRSQRIKHVCCGENHTAALT 316


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 161/381 (42%), Gaps = 59/381 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V +WG    GQLG G   D   P  + +  L++V+ +A G  H +ALTS      G V++
Sbjct: 79  VLTWGQNMHGQLGDGTNTDRKIP--VQVKDLNNVTAIAGGAWHSVALTSD-----GTVWT 131

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   +GQLG G       P  V         IT I++   H+  +   G ++T G   +
Sbjct: 132 WGSNWAGQLGDGTTKSRNKPVQVNNLK----NITAIASKGLHNLALKSDGTVWTWGRNIY 187

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G     ++PV+  S     +  IA G  HSL    D     ++ +G  + GQLG 
Sbjct: 188 GQLGDGTTTDRNTPVQTRSL--NTIISIAGGGYHSLAQKADG---TIWTWGLNQYGQLG- 241

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
               I + ++P +  G+ D+ +  I   GD S  L   G ++ WG       G  ST + 
Sbjct: 242 -DGTITNRTIPVLVNGIKDVSM--IRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNR 298

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           + P  +    +      G +H L+L  DG V   G + +G L D   +S   P+  +   
Sbjct: 299 STPVPMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQAS--T 356

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           +SN     V  IA+G +HS                            +  +  I  WG  
Sbjct: 357 LSN-----VTAIASGEQHSI--------------------------ALKSDGTIWAWGSN 385

Query: 390 EHGQLGLGNTCDQIHPKVVNL 410
            +GQLG G+  ++  P +V +
Sbjct: 386 RNGQLGDGSISNRSTPVLVKI 406



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 149/347 (42%), Gaps = 61/347 (17%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
           S++  ++ G  H +AL S      G V +WG+   GQLG G   D   P  V   +    
Sbjct: 58  STILQVSGGSFHSIALKSD-----GTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN---- 108

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
            +T I+ G  HS  ++  G ++T G    GQLG G  +S + PV+V++   KN+  IA  
Sbjct: 109 NVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNL--KNITAIASK 166

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             H+L L  D     V+ +G    GQL  G + DR    + P  T  L+   I+ I+  G
Sbjct: 167 GLHNLALKSDG---TVWTWGRNIYGQLGDGTTTDR----NTPVQTRSLN--TIISIAGGG 217

Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
             S A  A+G ++TWG       G  + ++   P  +      S    G +H +VL  +G
Sbjct: 218 YHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNG 277

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            + + G + HG L D  R +  R   V +  + N     ++ I  G +HS          
Sbjct: 278 TIWIWGFNQHGQLGD--RSTDNRSTPVPMGDLKN-----IMTIDGGGDHSL--------- 321

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                            ++  +  + TWG  E+GQLG G T  +  P
Sbjct: 322 -----------------ILKSDGTVWTWGNNENGQLGDGTTMSRATP 351


>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
 gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
          Length = 837

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 151/357 (42%), Gaps = 49/357 (13%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG  + GQLG G     L+P  + +S LS+ + LA G +H  AL         +V  WGR
Sbjct: 500 WGRNSSGQLGDGTTERRLTP--VTVSGLSAATALAAGDSHTCALLDTR-----RVRCWGR 552

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
            SSGQLG G   D + P  V+   G     T ++AG +H+  + D+G +   G  + GQL
Sbjct: 553 NSSGQLGDGTRTDRVTPVAVSGLSG----ATALAAGNSHTCTLLDTGTVQCWGWNSSGQL 608

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVS 216
           G G      +P  VS      V  +A G  H+  L+       V  +G    GQL  G  
Sbjct: 609 GDGTRTDRVTPAAVSGL--SGVTALAAGANHTCALMDS---GTVQCWGRNSSGQLGDGTR 663

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
            DR+     P    GL  +  +   AN   + AL   G +  WGR      G  +T+D  
Sbjct: 664 TDRV----TPAAVSGLSGVTALAAGAN--HTCALMDSGTVQCWGRNSSGQLGDGTTTDRV 717

Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
            P ++      +    G NH   L   G V   G +  G L D        P++     V
Sbjct: 718 TPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVA-----V 772

Query: 331 SNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFI--ISYTPFFPPFFINVI 377
           S L G+    +AAG+EH+  V         G+  + RL I  + Y+P   P  + +I
Sbjct: 773 SGLSGITA--LAAGSEHTCAVLNTGAARCWGRNLFGRLGISPLDYSPL--PRTVVII 825



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 148/386 (38%), Gaps = 63/386 (16%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           Q      WG  + GQLG G     L+P  + +S LS  + LA G  H  AL +  +    
Sbjct: 443 QTRTAQCWGENSPGQLGDGTTERRLTP--VTVSGLSGATSLAAGDGHTCALMNVRTA--- 497

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
               WGR SSGQLG G     L P  V+         T ++AG +H+  + D+  +   G
Sbjct: 498 --QCWGRNSSGQLGDGTTERRLTPVTVSGLSA----ATALAAGDSHTCALLDTRRVRCWG 551

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             + GQLG G      +PV VS         +A G  H+  LL D    Q +G+ S   G
Sbjct: 552 RNSSGQLGDGTRTDRVTPVAVSGL--SGATALAAGNSHTCTLL-DTGTVQCWGWNS--SG 606

Query: 212 QLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           QLG     DR+     P    GL  +  +   AN   + AL   G +  WGR      G 
Sbjct: 607 QLGDGTRTDRV----TPAAVSGLSGVTALAAGAN--HTCALMDSGTVQCWGRNSSGQLGD 660

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            + +D   P ++      +  A G NH   L   G V   G +  G L D        P 
Sbjct: 661 GTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTTTDRVTP- 719

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                 VS L GV  +   AGA H+                     P   +         
Sbjct: 720 ----AAVSGLSGVTAL--VAGANHTCA-----------------LMPTGTVQC------- 749

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVN 409
             WG  E GQLG G T D++ P  V+
Sbjct: 750 --WGKNEFGQLGDGTTTDRLTPVAVS 773



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 106/236 (44%), Gaps = 26/236 (11%)

Query: 30  EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           +   V+ W W +   GQLG G   D ++P  +  S LS V+ LA G  H  AL       
Sbjct: 593 DTGTVQCWGWNS--SGQLGDGTRTDRVTPAAV--SGLSGVTALAAGANHTCALMDS---- 644

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G V  WGR SSGQLG G   D + P  V+   G    +T ++AG NH+  + DSG +  
Sbjct: 645 -GTVQCWGRNSSGQLGDGTRTDRVTPAAVSGLSG----VTALAAGANHTCALMDSGTVQC 699

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G  + GQLG G      +P  VS      V  +  G  H+  L+       V  +G  +
Sbjct: 700 WGRNSSGQLGDGTTTDRVTPAAVSGL--SGVTALVAGANHTCALMPT---GTVQCWGKNE 754

Query: 210 RGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            GQL  G + DR+  V++  ++       I  ++A  + + A+   G    WGR  
Sbjct: 755 FGQLGDGTTTDRLTPVAVSGLS------GITALAAGSEHTCAVLNTGAARCWGRNL 804



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 120/285 (42%), Gaps = 30/285 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V  WG  + GQLG G   D ++P  + +S LS  + LA G +H   L        G V 
Sbjct: 546 RVRCWGRNSSGQLGDGTRTDRVTP--VAVSGLSGATALAAGNSHTCTLLDT-----GTVQ 598

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  SSGQLG G   D + P  V+   G    +T ++AG NH+  + DSG +   G  +
Sbjct: 599 CWGWNSSGQLGDGTRTDRVTPAAVSGLSG----VTALAAGANHTCALMDSGTVQCWGRNS 654

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
            GQLG G      +P  VS      V  +A G  H+  L+       V  +G    GQL 
Sbjct: 655 SGQLGDGTRTDRVTPAAVSGL--SGVTALAAGANHTCALMDS---GTVQCWGRNSSGQLG 709

Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            G + DR+     P    GL  +  +   AN   + AL   G +  WG+      G  +T
Sbjct: 710 DGTTTDRV----TPAAVSGLSGVTALVAGAN--HTCALMPTGTVQCWGKNEFGQLGDGTT 763

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           +D   P ++      +  A G  H   +   G     G +  G L
Sbjct: 764 TDRLTPVAVSGLSGITALAAGSEHTCAVLNTGAARCWGRNLFGRL 808



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 158/410 (38%), Gaps = 61/410 (14%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           Q   V  WG  + GQLG G     L+P  +++S LS  + LA GG H  AL        G
Sbjct: 343 QTETVQCWGLNSSGQLGDGTTERRLTP--VSVSGLSGSTALAAGGVHTCALLQT-----G 395

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            V  WGR   GQLG G     L P  V+   G     T ++AG  H+  V  +      G
Sbjct: 396 TVQCWGRNEFGQLGDGTTERRLTPVVVSGLSG----ATALTAGDRHTCAVLQTRTAQCWG 451

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           + + GQLG G      +PV VS         +A G  H+  L+          +G    G
Sbjct: 452 ENSPGQLGDGTTERRLTPVTVSGL--SGATSLAAGDGHTCALMNV---RTAQCWGRNSSG 506

Query: 212 QL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           QL  G ++ R+  V++  ++          ++A    + AL     +  WGR      G 
Sbjct: 507 QLGDGTTERRLTPVTVSGLS------AATALAAGDSHTCALLDTRRVRCWGRNSSGQLGD 560

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
            + +D   P ++      +  A G +H   L   G V   G +  G L D  R     P 
Sbjct: 561 GTRTDRVTPVAVSGLSGATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVTP- 619

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFIN 375
                 VS L GV    +AAGA H+  +         G+    +L   + T    P  ++
Sbjct: 620 ----AAVSGLSGVTA--LAAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTPAAVS 673

Query: 376 ----------------VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                            + ++  +  WG    GQLG G T D++ P  V+
Sbjct: 674 GLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTTTDRVTPAAVS 723



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 144/381 (37%), Gaps = 61/381 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V  WG  + GQLG G     L+P  + +S LS V+ LA G  H  A+    +V       
Sbjct: 297 VRCWGLNSSGQLGDGTTERRLTP--VAVSGLSGVTALAAGDFHTCAVLQTETV-----QC 349

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  SSGQLG G     L P  V+   G     T ++AG  H+  +  +G +   G   F
Sbjct: 350 WGLNSSGQLGDGTTERRLTPVSVSGLSGS----TALAAGGVHTCALLQTGTVQCWGRNEF 405

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G      +PV VS         +  G RH+  +L+         +G    GQLG 
Sbjct: 406 GQLGDGTTERRLTPVVVSGL--SGATALTAGDRHTCAVLQT---RTAQCWGENSPGQLGD 460

Query: 216 SKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                R   L  VT+ GL       ++A    + AL        WGR      G  +T  
Sbjct: 461 GTTERR---LTPVTVSGLSGA--TSLAAGDGHTCALMNVRTAQCWGRNSSGQLGDGTTER 515

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P ++    + +  A G +H   L     V   G +  G L D  R     P++V   
Sbjct: 516 RLTPVTVSGLSAATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAV--- 572

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
             S L G   +  AAG  H+                            + +   +  WGW
Sbjct: 573 --SGLSGATAL--AAGNSHTCT--------------------------LLDTGTVQCWGW 602

Query: 389 GEHGQLGLGNTCDQIHPKVVN 409
              GQLG G   D++ P  V+
Sbjct: 603 NSSGQLGDGTRTDRVTPAAVS 623



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 160/406 (39%), Gaps = 61/406 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V  WG    GQLG G  +D  +P  + +S LS V+ LA GG H  A     ++  G V  
Sbjct: 197 VRCWGENEHGQLGDGTTNDRWTP--VAVSGLSGVTALAAGGRHTCA-----ALNTGTVQC 249

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   +GQLG G     L P  V+   G     T ++AG+ H+  + D+G +   G  + 
Sbjct: 250 WGGNGAGQLGDGTRTSRLTPMAVSGLSG----ATALAAGFEHTCALLDTGTVRCWGLNSS 305

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
           GQLG G      +PV VS      V  +A G  H+  +L+      V  +G    GQL  
Sbjct: 306 GQLGDGTTERRLTPVAVSGL--SGVTALAAGDFHTCAVLQT---ETVQCWGLNSSGQLGD 360

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVNCP 272
           G ++ R+  VS+  ++          ++A G  + AL   G +  WGR  F    D    
Sbjct: 361 GTTERRLTPVSVSGLS------GSTALAAGGVHTCALLQTGTVQCWGRNEFGQLGDGTTE 414

Query: 273 QSLP----SSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           + L     S LS + A   G  H   +         G +  G L D        P++   
Sbjct: 415 RRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVT--- 471

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFIN---- 375
             VS L G     +AAG  H+  +         G+    +L   +      P  ++    
Sbjct: 472 --VSGLSGAT--SLAAGDGHTCALMNVRTAQCWGRNSSGQLGDGTTERRLTPVTVSGLSA 527

Query: 376 ------------VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                        + + R +  WG    GQLG G   D++ P  V+
Sbjct: 528 ATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVS 573



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 147/385 (38%), Gaps = 66/385 (17%)

Query: 33  VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           V   W    G++G+L T       SP       LS V  LA G  H  AL +      G 
Sbjct: 47  VAHTWIDSTGSEGRLMTNPGKAPASPL-----PLSRVIALAAGRYHTCALLNT-----GT 96

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+ WG   SGQLG G   D   P  V+   G    +T ++AG  H+  + ++G +   G 
Sbjct: 97  VWCWGWNGSGQLGDGTTTDRAMPVAVSGLSG----VTALAAGRYHTCALLNTGTVQCWGL 152

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            + GQLG     +  +PV VS      V  +A G RH+  LL       V  +G  + GQ
Sbjct: 153 NSSGQLGDWTITNRVTPVAVSGL--SGVIALAAGDRHTCALLDT---RTVRCWGENEHGQ 207

Query: 213 L--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
           L  G + DR   V++  ++       +  ++A G  + A    G +  WG       G  
Sbjct: 208 LGDGTTNDRWTPVAVSGLS------GVTALAAGGRHTCAALNTGTVQCWGGNGAGQLGDG 261

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           + +    P ++      +  A G+ H   L   G V   G +  G L D        P++
Sbjct: 262 TRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRLTPVA 321

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
                VS L GV           +A+  G FH                    + +   + 
Sbjct: 322 -----VSGLSGV-----------TALAAGDFH-----------------TCAVLQTETVQ 348

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVN 409
            WG    GQLG G T  ++ P  V+
Sbjct: 349 CWGLNSSGQLGDGTTERRLTPVSVS 373


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 14/199 (7%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++SWG   DGQLG G R   E  P L+       ++ +ACG  H  AL+       G +
Sbjct: 155 ELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSK-----SGAI 209

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WG+ + GQLG  +  + L+P  +      R  + +I+ G + S F+S  G +FTCG G
Sbjct: 210 YGWGKNTYGQLGLNDEENKLHPTQLKTLRSIR--VKYIACGEDFSAFLSADGGVFTCGAG 267

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGHG   +   P K+   +   V Q++CG RH+L L+      +VY FG G  GQL
Sbjct: 268 MYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPS--RGRVYSFGLGGGGQL 325

Query: 214 GVSKDRIRS-VSLPQVTIG 231
           G    R+++  S PQV +G
Sbjct: 326 GT---RVKTNCSTPQVVLG 341



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 142/326 (43%), Gaps = 29/326 (8%)

Query: 36  VWSWGAGTDGQLGTGRL-HDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ WG+   G+LG G + HD++ +P        S+VS +  G  H + LT       G+V
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTK-----SGEV 55

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           FS G     QLGH +      P+ V   D +R  IT IS G NH+   ++ G LF  G  
Sbjct: 56  FSCGNNDLDQLGHKKQRTK--PEKVEGLDFYR--ITKISCGGNHTLAFNEWGQLFGWGSD 111

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLG     +   P  + S    ++ QI+CG  HSL L  +    ++Y +G    GQL
Sbjct: 112 SHGQLGFNG-TTQPLPKIIKSLATFHIVQISCGKNHSLALTNN---GELYSWGGNYDGQL 167

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G+   R      P +   L  I I  I+   + S ALS  G +Y WG+      G N   
Sbjct: 168 GLGM-RSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEE 226

Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           +   P  L +  S+     A G +    L+ DG V   G   +G L      +   P   
Sbjct: 227 NKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILP--- 283

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVV 351
              K+  L G  V Q++ G  H+  +
Sbjct: 284 --RKIMELMGSTVTQVSCGKRHTLAL 307



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 150/351 (42%), Gaps = 54/351 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++ WG    G+LG G +       P+     +   ++ ++ G NH+  ++ SG +F+CG+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
               QLGH   R  + P KV       + +I+CG  H+L   +     Q++G+GS   GQ
Sbjct: 61  NDLDQLGHKKQR--TKPEKVEGLDFYRITKISCGGNHTLAFNE---WGQLFGWGSDSHGQ 115

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
           LG +     +  LP++   L    IV IS   + S AL+  G LY+WG       G    
Sbjct: 116 LGFNG---TTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR 172

Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           S+     +L  SL     +  A G NH   L+  G +   G + +G L   +  +   P 
Sbjct: 173 SEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHP- 231

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                ++  L  ++V  IA G + SA ++                           +  +
Sbjct: 232 ----TQLKTLRSIRVKYIACGEDFSAFLSA--------------------------DGGV 261

Query: 384 MTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
            T G G +GQLG G+T ++I P K++ L        T  +V CG   T A+
Sbjct: 262 FTCGAGMYGQLGHGSTSNEILPRKIMELMGS-----TVTQVSCGKRHTLAL 307



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 119/269 (44%), Gaps = 24/269 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G     QLG  +      P+ +       ++ ++CGG H LA         G++F
Sbjct: 54  EVFSCGNNDLDQLGHKK--QRTKPEKVEGLDFYRITKISCGGNHTLAFNE-----WGQLF 106

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQLG         P P        + I  IS G NHS  ++++G L++ G   
Sbjct: 107 GWGSDSHGQLGFNGTTQ---PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNY 163

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G    +   P  + S +   +  IACG  HS  L K      +YG+G    GQL
Sbjct: 164 DGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSK---SGAIYGWGKNTYGQL 220

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTS 267
           G++ +  +    P     L  I +  I+   D SA LSA+G ++T G G        STS
Sbjct: 221 GLNDEENK--LHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTS 278

Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVL 294
           +   P+ +   +  + +Q + G  H L L
Sbjct: 279 NEILPRKIMELMGSTVTQVSCGKRHTLAL 307


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 173/422 (40%), Gaps = 72/422 (17%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG G  G+LG G L  +  P +       +++ +ACGGAH L LT       G V++ G 
Sbjct: 37  WGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTED-----GCVYATGL 91

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG  E       +P+  F G    +  ISAG+NHS  ++  G L+  G  T GQL
Sbjct: 92  NDFGQLGVSES-KHYSVEPLCVF-GEEKKVVQISAGYNHSCAITVDGELYMWGKNTSGQL 149

Query: 159 GHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           G G    +  P+  KV      N+   A G  HS+ +     G   + +G G  G+LG  
Sbjct: 150 GLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD---GGAAFSWGIGVSGRLGHG 206

Query: 217 KD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RG-----F 263
            +       +  S   P++   L  I++  ++A    SA     G ++ +G RG      
Sbjct: 207 HESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFGERGIEKLRL 266

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
              SD   P  +    S  + A G  H  VLT  GE+   G + +G L     + S+  +
Sbjct: 267 KEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLG----IGSSDVI 322

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
            +  +         V Q++ G +H+A                           I+E R +
Sbjct: 323 HLPEKVQGPFLKSSVSQVSCGWKHTA--------------------------AISEGR-V 355

Query: 384 MTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
            TWGWG              GQLG G+  D I+P  V  G++ +     L+V CG   T 
Sbjct: 356 FTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVK----ALQVSCGFNHTG 411

Query: 432 AI 433
           AI
Sbjct: 412 AI 413



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 58/341 (17%)

Query: 140 FVSDSGCLFTC--GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           F  D+G  F    G+G +G+LG G+  S   PV   +F NK ++ IACG  H+L L +D 
Sbjct: 25  FSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTED- 83

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
               VY  G    GQLGVS+ +  SV  P    G  + ++V ISA  + S A++ +G LY
Sbjct: 84  --GCVYATGLNDFGQLGVSESKHYSVE-PLCVFG-EEKKVVQISAGYNHSCAITVDGELY 139

Query: 258 TWGRGFNSTSDVNCPQSLPS------------SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            WG+  N++  +   +  P+             ++   AALG  H + ++  G     G 
Sbjct: 140 MWGK--NTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGI 197

Query: 306 SHHGMLSDPERVSSTRPLSVALEK----VSNLDGVKVIQIAAGAEHSAV--------VTG 353
              G L      S         E     + +L+G+KV  +AAG  +SA         V G
Sbjct: 198 GVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFG 257

Query: 354 KFHWVRLFIISYTPFFPPFFIN----------------VIAENRAIMTWGWGEHGQLGLG 397
           +    +L +   +    P  I+                V+  +  + TWG  E+G LG+G
Sbjct: 258 ERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIG 317

Query: 398 NTCDQIHPKVVNLGDEFQN---RDTQLEVFCGSGFTYAISR 435
           ++       V++L ++ Q    + +  +V CG   T AIS 
Sbjct: 318 SS------DVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISE 352



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 25/239 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGK 92
           +++ WG  T GQLG G+    + P    +  L   ++ M A G  H +A++      GG 
Sbjct: 137 ELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD-----GGA 191

Query: 93  VFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            FSWG G SG+LGHG     L          P+ +   +G +  + +++AG  +S    +
Sbjct: 192 AFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIK--VKYVAAGLLNSACTDE 249

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +GC+F  G+    +L   +    + P  +S   +    ++ACG  H+ VL       ++Y
Sbjct: 250 NGCVFVFGERGIEKLRLKEMSDATKPSLISELPSSK--EVACGGYHTCVLTNS---GELY 304

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            +GS + G LG+    +  + LP+   G      V   + G +  A  +EG ++TWG G
Sbjct: 305 TWGSNENGCLGIGSSDV--IHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWG 361



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 25/164 (15%)

Query: 46  QLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
           +L    + D   P L+  S L S   +ACGG H   LT+      G++++WG   +G LG
Sbjct: 263 KLRLKEMSDATKPSLI--SELPSSKEVACGGYHTCVLTNS-----GELYTWGSNENGCLG 315

Query: 106 HGEMVDALYPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG----DGTF---- 155
            G       P+ V   F    + +++ +S GW H+  +S+ G +FT G    +GTF    
Sbjct: 316 IGSSDVIHLPEKVQGPFL---KSSVSQVSCGWKHTAAISE-GRVFTWGWGGSNGTFSEVG 371

Query: 156 ----GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
               GQLGHG    + +P +V    +    Q++CG  H+  +L+
Sbjct: 372 HSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 415


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 123/249 (49%), Gaps = 25/249 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 136 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 189

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++ T+ +I+ G   S  V D+G ++  G 
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-TVVNIACGQMCSMAVVDTGEVYVWGY 248

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 249 NGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 305

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-------- 262
           LG      +S   P +      IEI    +    SAA +  GH+Y WG  RG        
Sbjct: 306 LGTGNKSNQSYPTPVIVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQCRGQSVTLPHL 364

Query: 263 --FNSTSDV 269
             F+ST DV
Sbjct: 365 THFSSTDDV 373



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 22/272 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 78  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHVVLATTEGE 136

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 137 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 193

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G +Y WG   N 
Sbjct: 194 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNG 252

Query: 266 --------TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                        C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 253 QLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 312

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           + + P  V +EK       ++I+IAA   HSA
Sbjct: 313 NQSYPTPVIVEK------DRIIEIAAC--HSA 336


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 23  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 83  LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 313 -DRIIEIAA 320


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 183/411 (44%), Gaps = 73/411 (17%)

Query: 50  GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
           G L D L P+LL  + +  V  ++ GG H   +T       G++FSWG+G  G+LGH   
Sbjct: 283 GMLVDALLPKLLESTMMLDVQSISLGGKHAALITK-----HGEIFSWGQGKCGRLGHKIN 337

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS- 168
           +D  +PK V   +G       ++ G   +  ++ +G ++T GD  FG     +  S S  
Sbjct: 338 MDLDHPKLVDSLNG--IAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRW 395

Query: 169 -PVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
            P K+S      ++  +ACG  H+ V+       +++ +G G  G LG     + S+S P
Sbjct: 396 LPQKLSGPLKGISISNVACGEWHTAVV---SACGRLFTYGDGTFGALG--HGNLISLSQP 450

Query: 227 QVTIGLHDIEIVGISANGDRSAAL-----------SAEGHLYTWGRGFNST--SDVNCPQ 273
           +    L+ + +  ++     +AA+           SA G L+TWG G         N  +
Sbjct: 451 KEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERK 510

Query: 274 SLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
            LP+ ++      F+Q + G    + LT  G V  +G S HG L +     S+R  SVA+
Sbjct: 511 LLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGN----LSSRDASVAI 566

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
            +   L    V  I++G+ H A +T                              + TWG
Sbjct: 567 VE-GKLKEEFVKAISSGSYHVASLTSTGR--------------------------VYTWG 599

Query: 388 WGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLE-VFCGSGFTYAISRH 436
            G HGQLGLG++ D+  P  V  LGD+      Q+E + CGS FT AI  H
Sbjct: 600 KGAHGQLGLGDSDDRNLPTFVEALGDK------QVESIACGSNFTAAICLH 644


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++SWG    GQLG GR    +E  P+ ++      ++++ACG  H + LT PS    G 
Sbjct: 208 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-PS----GT 262

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF WGR S GQLG  +  D L+P  +      R  I H+  G NH+  ++  G +FT G 
Sbjct: 263 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQR--IKHVCCGENHTAALTADGGVFTFGA 320

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           GT+GQLGHG   + + P +V   +   + Q++CG  H++         ++Y FG G  GQ
Sbjct: 321 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQ--SGRLYIFGLGMSGQ 378

Query: 213 LGVSKDRIRSVSLPQVTIGL 232
           LG     + S +LP    GL
Sbjct: 379 LG--NGTLESSALPVTVPGL 396



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 154/378 (40%), Gaps = 58/378 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELS-------PQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
           ++SWG G +G+LG  +  D +        P+ +      +V  +ACG  H L L +    
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA---- 102

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
             G V+S G    GQLG    +  L  + V     H   I  ++ G  HS  +SD+G +F
Sbjct: 103 -NGSVYSCGANDFGQLGQDRSMRKL--EQVAALSAHE--IRAVACGEAHSLALSDAGQVF 157

Query: 149 TCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           + G    GQLG G +  S   P  +      ++ QIACG  H L L  +    +++ +G 
Sbjct: 158 SWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANN---GELFSWGG 214

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
              GQLG+ +D   +  LP+    L  + +  ++     S  L+  G ++ WGR      
Sbjct: 215 NASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQL 274

Query: 262 GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G +   D   P  L    S        G NH   LT DG V   G   +G L    +V+ 
Sbjct: 275 GLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNE 334

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
             P      +V  L G  + Q++ G  H+              ++Y P           +
Sbjct: 335 AVP-----RRVVELMGTAISQLSCGRCHT--------------VAYAP-----------Q 364

Query: 380 NRAIMTWGWGEHGQLGLG 397
           +  +  +G G  GQLG G
Sbjct: 365 SGRLYIFGLGMSGQLGNG 382



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 140/336 (41%), Gaps = 62/336 (18%)

Query: 93  VFSWGRGSSGQLGHGEMVDAL-------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           ++SWG G +G+LG  +  D +        P+ V  F G R  +  ++ G  H+  +  +G
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRF-GTR-AVREVACGHKHTLVLLANG 104

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            +++CG   FGQLG    RS     +V++     +  +ACG  HSL L       QV+ +
Sbjct: 105 SVYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGEAHSLALSD---AGQVFSW 159

Query: 206 GSGKRGQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--- 259
           G  + GQLG     + R+R    P+V   L  + IV I+       AL+  G L++W   
Sbjct: 160 GCNRNGQLGCGTEEESRLR----PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 215

Query: 260 -----GRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                G G +ST +   P+ +     +  +  A G  H + LT  G V + G +  G L 
Sbjct: 216 ASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLG 275

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             ++     P       +  L   ++  +  G  H+A +T                    
Sbjct: 276 LSDQRDRLHPTV-----LKPLRSQRIKHVCCGENHTAALTA------------------- 311

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                  +  + T+G G +GQLG G   ++  P+ V
Sbjct: 312 -------DGGVFTFGAGTYGQLGHGVKVNEAVPRRV 340



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 55/280 (19%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S P +V  F  + V ++ACG +H+LVLL +     VY  G+   GQLG    + RS+   
Sbjct: 74  SQPERVRRFGTRAVREVACGHKHTLVLLAN---GSVYSCGANDFGQLG----QDRSMRKL 126

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC---------PQSLP- 276
           +    L   EI  ++     S ALS  G +++WG   N    + C         P+ +  
Sbjct: 127 EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG--CNRNGQLGCGTEEESRLRPKVIKK 184

Query: 277 -SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
            ++L   Q A G  H L L  +GE+   GG+  G L      +    L     +VS+L G
Sbjct: 185 LATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLP---RRVSHLVG 241

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
           V +  +A GA HS              +  TP            +  +  WG    GQLG
Sbjct: 242 VPLALVACGAMHS--------------VGLTP------------SGTVFVWGRNSCGQLG 275

Query: 396 LGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 434
           L +  D++HP V+        R  +++ V CG   T A++
Sbjct: 276 LSDQRDRLHPTVLK-----PLRSQRIKHVCCGENHTAALT 310


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G+  +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 23  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +   +G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 83  LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 313 -DRIIEIAA 320


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVDTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +VS+     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 312



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 22/272 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSG-PHVVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 153 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  S    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           + + P  V +EK       ++I+IAA   HSA
Sbjct: 272 NQSYPTPVVVEK------DRIIEIAAC--HSA 295


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +   +    TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIE--NIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG  ++GQ+G   + +   PQ + +     VS ++CG  H   +T+      G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +G   +G+LG    +   +  P    +     I  ++ G  H+  ++++  ++T G G 
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           FGQLG G +   +S P  + +  ++ +  I+CG  H+ ++    L   +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327

Query: 214 GVSKDRIRSVSLPQV 228
           G+  +   +  +P +
Sbjct: 328 GLGLENFTNHFIPTL 342


>gi|380789959|gb|AFE66855.1| secretion-regulating guanine nucleotide exchange factor [Macaca
           mulatta]
          Length = 458

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 177/411 (43%), Gaps = 79/411 (19%)

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           +P++ +   +F+WG  S GQLG G   D L P+ +  F   R ++  I+ G  HS  V+D
Sbjct: 11  APATAV---LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTD 66

Query: 144 SGCLFTCG---DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            G LF CG   DG  G LGH +   + +P K  S     + Q+ACG   +++L ++    
Sbjct: 67  IGDLFVCGLNKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIILTEN---G 120

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           QV   GS   GQLGV     R V +PQ  I LH  ++V I+A    + A +A G ++ WG
Sbjct: 121 QVLSCGSNSFGQLGVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWG 178

Query: 261 RGFNSTSDVNCP-QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGG 305
            G  S     CP Q+LP           + L  S+A     G +H   LT  GEV + G 
Sbjct: 179 TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 238

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH--SAVVTGK-FHWVRL-- 360
           + HG L+     ++  P+   +E        KV  + +G  H  +   TGK F W R   
Sbjct: 239 NKHGQLATE---AAFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADY 294

Query: 361 -------------FIISYTPFFP--------PFFINVIA----------ENRAIM----- 384
                         +     F P        P  ++ +            N A++     
Sbjct: 295 GQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHNLAVIGGVCY 354

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           +WGW EHG  G G   +   PK V    +     + L V CG+G + A+ +
Sbjct: 355 SWGWNEHGMCGDGTEANIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)

Query: 35  KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
           KV++WG    GQLG              D   P  +LLN     L  L+  + ++CG  H
Sbjct: 285 KVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEH 344

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
            LA      VIGG  +SWG    G  G G   +   PKPV               GH   
Sbjct: 345 NLA------VIGGVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLA 398

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +  + A   H   V D    +   D T
Sbjct: 399 LCQLPA---HPALVQDPKVTYLSPDAT 422



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 23/177 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           +V+ WG+   GQL T      + PQ +      +  V+ +  G  H++A T       GK
Sbjct: 232 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTET-----GK 285

Query: 93  VFSWGRGSSGQLGHG---------EMVDALYPKPVTFFDG----HRYT-ITHISAGWNHS 138
           VF+WGR   GQLG           E  D+  P      +     H  T  T +S G  H+
Sbjct: 286 VFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHN 345

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
             V    C ++ G    G  G G   +  +P  V + ++ +   + CG  HSL L +
Sbjct: 346 LAVIGGVC-YSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401


>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
 gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila
           SB210]
          Length = 4058

 Score =  104 bits (260), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 173/439 (39%), Gaps = 97/439 (22%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL----NLSSLSSVSMLACGGAHVLALTSPSSVIG 90
           +V +WG  + G +GTG L  +  P+++    N    S +  ++CG  H  A++     + 
Sbjct: 279 QVLAWGDNSYGNIGTGDLDYQEKPKIIQFDENKGDDSRIQFISCGANHCAAVS-----LS 333

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           GK+++WG+G  GQLGH  +++   P  V   +     + ++S G  H+  +++ G  ++ 
Sbjct: 334 GKLYTWGQGIQGQLGHQNVMNLSIPTAVKS-ELQEKKVVYVSCGGAHTVCLTNEGYAYSF 392

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+   GQLG GD    + PVK+    N  +  + CGM ++ +L +     +++  GS + 
Sbjct: 393 GNNKNGQLGLGDQEQRNVPVKIQKLQNYFIVNVVCGMNNTFILTQ---VGKIFACGSNQH 449

Query: 211 GQLGV-----SKDR-----------IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            +LG+      KD            ++ V+ P     L D+ I  I+A+   + ALS +G
Sbjct: 450 NKLGLDQLFYQKDNFLNPIDLDINFLKGVNNPN----LKDVYIYQIAASPHFTYALSNQG 505

Query: 255 HLYTWGRGFN----------------STSDVNCPQSLPSSLSFSQA-------------- 284
            L TWG   N                + S       +P S  F                 
Sbjct: 506 LLTTWGLQVNDCLGRSIDNYISEKMKNLSKNRTNMLIPCSTKFRNQIDSYTTYHKFYYPI 565

Query: 285 ---------------------ALGWNHVLVLTGDGEVLMLGGS---HHGMLSDPERVSST 320
                                 LG  H + LT  GE+ + G +    HG +S+  R    
Sbjct: 566 QNSTIFRASEKDFISNDIVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQEYD 625

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
                     SN   + +IQ     E    V   F+      I+Y      + +  I   
Sbjct: 626 E---------SNEKNINIIQNDISKETLPSVVSFFNIKENRRITYIAAGYEYCM-AIENK 675

Query: 381 RAIMTWGWGEHGQLGLGNT 399
           R +  WG    GQLG+G T
Sbjct: 676 RLVYAWGRNTDGQLGIGKT 694



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 90/342 (26%), Positives = 144/342 (42%), Gaps = 62/342 (18%)

Query: 58   PQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY 114
            P L+N   +     VS +ACG  + +A+ +       KV+ WG+   GQLG G +   ++
Sbjct: 2715 PSLVNFFDIKENRRVSFIACGAEYCMAIENRR-----KVYGWGKNDQGQLGIGAISTIVH 2769

Query: 115  -PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HSSPVKV 172
             P  V   +G    +  ++ G  H+ F+S+ GC+++CG  T G+LG G   +    P+K+
Sbjct: 2770 KPTEVQGLEG--LLMKQVACGQVHTLFLSEEGCVYSCGSPTDGKLGLGKRDAIQLFPMKI 2827

Query: 173  SSFVNKNVHQIACGMRHSLVLLKDC-----------LGNQ-----VYGFGSGKRGQLGV- 215
             S     + ++ACG  HSL L +D            L N+     VY +GS    +LG  
Sbjct: 2828 QSLA--KIDKVACGYTHSLALGEDVYVDEDFDDFNLLQNEFNKKVVYSWGSAYESKLGHG 2885

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GF-------- 263
             K+ +   +  Q      D     I A G  SAA+  E +L  WG     G+        
Sbjct: 2886 EKENLFEPNRIQANFSFRD-----IFAGGHHSAAIDKEHNLIVWGPYIYFGYQKPEEKNK 2940

Query: 264  -NSTSDVN---CPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLG----GSHHGMLS 312
             N   DVN    P   P      Q    ALG  + +VL    ++   G       +    
Sbjct: 2941 KNYRQDVNEFIRPTLHPRQQLIQQVQKVALGDKYSIVLNNINQIFQWGVFDKTYENKCKE 3000

Query: 313  DPE--RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +P   R      L + ++K+ N     + QIA    H+A+++
Sbjct: 3001 NPNLTRNQINESLMINIQKI-NAPSSTITQIAVANNHAALIS 3041



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 10/197 (5%)

Query: 65   SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
            S+ SV  +ACG +  + LT        ++FSWG   SG LG G+    + P  V    G 
Sbjct: 2329 SMFSVIQIACGWSFCMILTRSH-----QLFSWGDNRSGNLGLGDTRYRIKPSLVLLEFGK 2383

Query: 125  RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQI 183
             + +  I     HS  +   G L+T G G  GQLG     +   P +V   +  KN+ Q+
Sbjct: 2384 PFQVRFIDCQAQHSAAIQLDGKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKNITQV 2443

Query: 184  ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
            +CG+ H   +  D      Y +GS   GQLG+ KD +  ++ P V   L    I+ ++  
Sbjct: 2444 SCGVFHMACITNDGF---CYTWGSNTNGQLGLDKD-LPQINYPCVVERLQSYFIIQVTCG 2499

Query: 244  GDRSAALSAEGHLYTWG 260
             + +   S  G LY  G
Sbjct: 2500 YNNTFFFSQNGRLYGCG 2516



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 26/243 (10%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQ--LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
            +++SWG    G LG G     + P   LL       V  + C   H  A+      + GK
Sbjct: 2351 QLFSWGDNRSGNLGLGDTRYRIKPSLVLLEFGKPFQVRFIDCQAQHSAAIQ-----LDGK 2405

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            +++WG+G +GQLG     + L P+ V      +  IT +S G  H   +++ G  +T G 
Sbjct: 2406 LYTWGQGLNGQLGINAQSNMLLPQRVGGILEQK-NITQVSCGVFHMACITNDGFCYTWGS 2464

Query: 153  GTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             T GQLG   D    + P  V    +  + Q+ CG  ++    ++    ++YG GS +  
Sbjct: 2465 NTNGQLGLDKDLPQINYPCVVERLQSYFIIQVTCGYNNTFFFSQN---GRLYGCGSNQHN 2521

Query: 212  QLGV--------SKDRIRSVSLPQVTI------GLHDIEIVGISANGDRSAALSAEGHLY 257
            ++G+        SK+    V L    +       ++D+ I  I ++   + ALS +G+L 
Sbjct: 2522 KIGLDYNNYSKNSKNIYLPVELNNTFLKGVSFSKINDLYIYQIQSSFHSTFALSNKGYLT 2581

Query: 258  TWG 260
            +WG
Sbjct: 2582 SWG 2584



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 31/181 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++WG  TDGQLG G+    + SPQ++     + +  +ACG  H L LT       G+V+
Sbjct: 678 VYAWGRNTDGQLGIGKTQYYVESPQMVLGLEGNLMKAIACGENHTLFLTDT-----GQVY 732

Query: 95  SWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-------- 145
           S G    G+LG G   +  L P+ +T        +  IS G +HS  ++           
Sbjct: 733 SCGSSKDGKLGLGNRTNTQLQPQLITNLS----KVEQISCGQSHSMALAQDDFFKQDDDE 788

Query: 146 ----------CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
                      ++T G+    +LGHGD  +   P K+ S  N     I+ G  HS  L  
Sbjct: 789 EHARQINVKMVVYTWGNAWESKLGHGDRENLYEPTKIQS--NYLFKYISAGSHHSAALTT 846

Query: 196 D 196
           D
Sbjct: 847 D 847



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 32/219 (14%)

Query: 60  LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM---VDALYPK 116
             N+     ++ +A G  + +A+ +   V     ++WGR + GQLG G+    V++  P+
Sbjct: 650 FFNIKENRRITYIAAGYEYCMAIENKRLV-----YAWGRNTDGQLGIGKTQYYVES--PQ 702

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V   +G+   +  I+ G NH+ F++D+G +++CG    G+LG G+  +     ++ + +
Sbjct: 703 MVLGLEGN--LMKAIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQLQPQLITNL 760

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQ---------------VYGFGSGKRGQLGVSKDRIR 221
           +K V QI+CG  HS+ L +D    Q               VY +G+    +LG   DR  
Sbjct: 761 SK-VEQISCGQSHSMALAQDDFFKQDDDEEHARQINVKMVVYTWGNAWESKLG-HGDR-- 816

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             +L + T    +     ISA    SAAL+ + +L  WG
Sbjct: 817 -ENLYEPTKIQSNYLFKYISAGSHHSAALTTDDNLVVWG 854



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 18/202 (8%)

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK---- 178
           G +  +  I  G N    ++ +  +   GD ++G +G GD      P  +    NK    
Sbjct: 256 GRKTFVVQICCGLNFCLILTYNFQVLAWGDNSYGNIGTGDLDYQEKPKIIQFDENKGDDS 315

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEI 237
            +  I+CG  H   +    L  ++Y +G G +GQLG     + ++S+P  V   L + ++
Sbjct: 316 RIQFISCGANHCAAV---SLSGKLYTWGQGIQGQLG--HQNVMNLSIPTAVKSELQEKKV 370

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSF--SQAALGWN 289
           V +S  G  +  L+ EG+ Y++G       G       N P  +    ++       G N
Sbjct: 371 VYVSCGGAHTVCLTNEGYAYSFGNNKNGQLGLGDQEQRNVPVKIQKLQNYFIVNVVCGMN 430

Query: 290 HVLVLTGDGEVLMLGGSHHGML 311
           +  +LT  G++   G + H  L
Sbjct: 431 NTFILTQVGKIFACGSNQHNKL 452



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 14/151 (9%)

Query: 171  KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVT 229
            ++  F   +V QIACG    ++L +    +Q++ +G  + G LG+   R R   SL  + 
Sbjct: 2324 QIKGFSMFSVIQIACGWSFCMILTRS---HQLFSWGDNRSGNLGLGDTRYRIKPSLVLLE 2380

Query: 230  IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC------PQSLPSSL---S 280
             G    ++  I      SAA+  +G LYTWG+G N    +N       PQ +   L   +
Sbjct: 2381 FG-KPFQVRFIDCQAQHSAAIQLDGKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKN 2439

Query: 281  FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
             +Q + G  H+  +T DG     G + +G L
Sbjct: 2440 ITQVSCGVFHMACITNDGFCYTWGSNTNGQL 2470



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 56/270 (20%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV------- 88
            V+S G+ TDG+LG G+  D +    + + SL+ +  +ACG  H LAL     V       
Sbjct: 2801 VYSCGSPTDGKLGLGK-RDAIQLFPMKIQSLAKIDKVACGYTHSLALGEDVYVDEDFDDF 2859

Query: 89   ------IGGKV-FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
                     KV +SWG     +LGHGE  +   P  +       ++   I AG +HS  +
Sbjct: 2860 NLLQNEFNKKVVYSWGSAYESKLGHGEKENLFEPNRIQ----ANFSFRDIFAGGHHSAAI 2915

Query: 142  SDSGCLFTCGDGT-FGQLGHGDYRSHSSPVKVSSFVNKNVH----------QIACGMRHS 190
                 L   G    FG     +    +    V+ F+   +H          ++A G ++S
Sbjct: 2916 DKEHNLIVWGPYIYFGYQKPEEKNKKNYRQDVNEFIRPTLHPRQQLIQQVQKVALGDKYS 2975

Query: 191  LVLLKDCLGNQVYGFG--------------SGKRGQLGVS-KDRIRSVSLPQVTIGLHDI 235
            +VL      NQ++ +G              +  R Q+  S    I+ ++ P  TI     
Sbjct: 2976 IVLNNI---NQIFQWGVFDKTYENKCKENPNLTRNQINESLMINIQKINAPSSTI----T 3028

Query: 236  EIVGISANGDRSAALSAEGHLYTWGRGFNS 265
            +I    A  +  AAL ++  LYTWG   N+
Sbjct: 3029 QI----AVANNHAALISKNQLYTWGYDMNT 3054



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 22/140 (15%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV----- 88
           +V+S G+  DG+LG G R + +L PQL  +++LS V  ++CG +H +AL           
Sbjct: 730 QVYSCGSSKDGKLGLGNRTNTQLQPQL--ITNLSKVEQISCGQSHSMALAQDDFFKQDDD 787

Query: 89  --------IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
                   +   V++WG     +LGHG+  +   P  +       Y   +ISAG +HS  
Sbjct: 788 EEHARQINVKMVVYTWGNAWESKLGHGDRENLYEPTKIQ----SNYLFKYISAGSHHSAA 843

Query: 141 VSDSGCLFTCGDGTFGQLGH 160
           ++    L     G +   GH
Sbjct: 844 LTTDDNLVVW--GPYKYFGH 861



 Score = 42.7 bits (99), Expect = 0.34,   Method: Composition-based stats.
 Identities = 66/274 (24%), Positives = 110/274 (40%), Gaps = 53/274 (19%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
            KV+ WG    GQLG G +   +  +   +  L  + M  +ACG  H L L+       G 
Sbjct: 2747 KVYGWGKNDQGQLGIGAI-STIVHKPTEVQGLEGLLMKQVACGQVHTLFLSEE-----GC 2800

Query: 93   VFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSD------- 143
            V+S G  + G+LG G+  DA  L+P  +         I  ++ G+ HS  + +       
Sbjct: 2801 VYSCGSPTDGKLGLGKR-DAIQLFPMKIQSLA----KIDKVACGYTHSLALGEDVYVDED 2855

Query: 144  ------------SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
                           +++ G     +LGHG+  +   P ++ +  N +   I  G  HS 
Sbjct: 2856 FDDFNLLQNEFNKKVVYSWGSAYESKLGHGEKENLFEPNRIQA--NFSFRDIFAGGHHSA 2913

Query: 192  VLLKD----CLGNQVYGFGSGKRGQLGVSKDR------IRSVSLPQVTIGLHDIEIVGIS 241
             + K+      G  +Y FG  K  +      R      IR    P+  +    I+ V   
Sbjct: 2914 AIDKEHNLIVWGPYIY-FGYQKPEEKNKKNYRQDVNEFIRPTLHPRQQL----IQQVQKV 2968

Query: 242  ANGDR-SAALSAEGHLYTWGRGFNSTSDVNCPQS 274
            A GD+ S  L+    ++ WG  F+ T +  C ++
Sbjct: 2969 ALGDKYSIVLNNINQIFQWGV-FDKTYENKCKEN 3001



 Score = 40.8 bits (94), Expect = 1.5,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 44/207 (21%)

Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV----------- 223
           F++ ++  I  G+ H++ L       ++Y +GS +  Q G   + IR             
Sbjct: 578 FISNDIVDIELGVFHTMALTN---AGEIYVWGSNQMCQHGCISNIIRQEYDESNEKNINI 634

Query: 224 --------SLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGR------GFNS 265
                   +LP V +   +I+    I  I+A  +   A+  +  +Y WGR      G   
Sbjct: 635 IQNDISKETLPSV-VSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGIGK 693

Query: 266 TSD-VNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           T   V  PQ    L  +L     A G NH L LT  G+V   G S  G L    R ++  
Sbjct: 694 TQYYVESPQMVLGLEGNL-MKAIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNT-- 750

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
              +  + ++NL   KV QI+ G  HS
Sbjct: 751 --QLQPQLITNLS--KVEQISCGQSHS 773


>gi|350580248|ref|XP_003122992.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           isoform 1 [Sus scrofa]
          Length = 458

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 178/434 (41%), Gaps = 67/434 (15%)

Query: 28  EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
           E       +++WGA + GQLG G   D L PQ L+       V  +  GG H   +T   
Sbjct: 9   EAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTD-- 66

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
               G +F  G    GQLG G   D LY        G    I  ++ GW+ +  ++ +G 
Sbjct: 67  ---QGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLG--CPIQQVACGWDFTIILTKNGQ 121

Query: 147 LFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           + +CG  +FGQLG  HG  R      +      + V  IA G+RH+L      L  Q +G
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVP--QAIEVQREKVVSIAAGLRHALAATASGLVFQ-WG 178

Query: 205 FG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            G   SG+R   G +     +   P    GL + + V + A    SA+L+  G LY WG 
Sbjct: 179 TGLASSGRRLCPGQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGS 238

Query: 262 G-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHVLVLTGDGEVLMLGGSHHGMLS 312
                  +  + +  PQ + +    ++  AA+  GW H++  T  G+V   G + +G L 
Sbjct: 239 NKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298

Query: 313 ---------DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTGKFHWVRLF 361
                     P++ +S+ P S     V S+L  +    +++ G+EH+  V G        
Sbjct: 299 RTLESPEGWKPKKQASSLPCSRPARSVPSSLPCLTGATEVSCGSEHNLAVVGG------- 351

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                                  +WGW EHG  G G   +   PK V    +     + L
Sbjct: 352 --------------------TCYSWGWNEHGMCGDGTEANVWTPKPV----QALRSSSGL 387

Query: 422 EVFCGSGFTYAISR 435
            + CG+G + A+ +
Sbjct: 388 RLGCGAGHSLALCQ 401


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 237 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 22/267 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSG 145
           + +  ++F  G    G LG G++   + P+ +    G +  I  +S G   H    +  G
Sbjct: 66  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKK--IASLSYGSGPHIVLATTEG 123

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            +FT G   + QLG+G       P ++S+   NK V ++ACG  HSLVL  D    +V+ 
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSD---GEVFA 180

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           +G    GQ+G S   +      +VT  L +  +V I+       A+   G +Y WG    
Sbjct: 181 WGYNNSGQVG-SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 239

Query: 262 -----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
                G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    +
Sbjct: 240 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAA 343
            + + P  V +EK       ++I+IAA
Sbjct: 300 SNQSYPTPVTVEK------DRIIEIAA 320



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 43/273 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 72  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATT--EGEVFTWG 129

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V   Q++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 130 HNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 188

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST +   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 189 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG 248

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 249 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 278

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +   +  WG   +GQLG GN  +Q +P  V +
Sbjct: 279 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV 310


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 148/327 (45%), Gaps = 24/327 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G       P+L++  + S+V +  CG  H  A+T+      G ++
Sbjct: 316 QMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTA-----SGDLY 370

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  ++G LG G    A + KPV          +  IS G  H+ FV+  G LFT G
Sbjct: 371 AWGDGDHNAGLLGLGS--GASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 428

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL----KDCLGNQVYGFGS 207
           DGTFG LGHGD  S + P +V +       + ACG+ HS  ++    +     +++ +G 
Sbjct: 429 DGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGD 488

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           G  G+LG      R +  P     L       ++     + ALS  G +Y  G    S  
Sbjct: 489 GDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHD 546

Query: 268 DVNCPQSLPSSL--SFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            V  P  +   L  SF Q  A G++H+ VL    EV   G   +G L   +      P  
Sbjct: 547 IVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTL 606

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVV 351
           V       L G +V ++  G+ ++A +
Sbjct: 607 VKA-----LKGKQVRKVVCGSNYTATI 628



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 184/438 (42%), Gaps = 82/438 (18%)

Query: 28  EEEQQVVKVWSWGAGT-DGQLGTGR---------LHDELSPQLLNLSSLSSVSMLACGGA 77
           E+ + +  V+ WG    DG LG G          + D   P++L          ++CG  
Sbjct: 247 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 306

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           + + +T       G+++SWG  S G+LGHG      +PK +  F+G   T+     G  H
Sbjct: 307 YAVLVTKQ-----GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGS--TVELADCGEFH 359

Query: 138 SGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
           +  V+ SG L+  GDG    G LG G   SH  PV++        V  I+CG  H+  + 
Sbjct: 360 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 419

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL---- 250
            +    +++ FG G  G LG   DRI S ++P+    L+    +  +     SAA+    
Sbjct: 420 SE---GKLFTFGDGTFGALG-HGDRI-STNIPREVEALNGCRTIKAACGVWHSAAVVSVF 474

Query: 251 ---SAEGHLYTWGRGFNST---SDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDG 298
              ++ G L+TWG G +      D+ C + +PS +      SF Q A G +  + L+  G
Sbjct: 475 GEATSSGKLFTWGDGDDGRLGHGDIEC-RLIPSCVTELDTTSFQQVACGQSITVALSMSG 533

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
           +V  +G       +DP       P  +       L    V ++A G  H AV+  K    
Sbjct: 534 QVYAMG------TADPSHDIVRAPSCIE----GGLGKSFVQEVACGFHHIAVLNSK---- 579

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                              AE   + TWG G +GQLG G+T  +  P +V      Q R 
Sbjct: 580 -------------------AE---VYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVR- 616

Query: 419 TQLEVFCGSGFTYAISRH 436
              +V CGS +T  I  H
Sbjct: 617 ---KVVCGSNYTATICLH 631


>gi|387928890|ref|ZP_10131567.1| regulator of chromosome condensation-like protein [Bacillus
           methanolicus PB1]
 gi|387585708|gb|EIJ78032.1| regulator of chromosome condensation-like protein [Bacillus
           methanolicus PB1]
          Length = 641

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 150/327 (45%), Gaps = 37/327 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V +WGA   GQLG G L+D   P+++  ++L++   +A G  H LAL S S+V      +
Sbjct: 53  VCAWGANYSGQLGDGTLNDSNIPEIV--TALTNAIEVAAGVFHSLALLSNSTV-----RA 105

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   +GQLG G    +  P  V    G    I  ISAG NHS  + + G +   G   F
Sbjct: 106 WGDNFAGQLGDGTFNSSTVPVSVI---GLTNAIA-ISAGLNHSLALLNDGTVRAWGGNFF 161

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G   + ++PV +      NV  ++ G  HSL LL D     V  +G+   GQLG 
Sbjct: 162 GQLGNGTDITSNAPVIILGL--SNVVAVSAGGEHSLALLYD---GTVCAWGANYSGQLGD 216

Query: 216 SKDRIRSVSLPQVTIGLHDI--EIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
             +  RS+ +    IG   +   ++ ISA    S AL  +G +  WG       G  + +
Sbjct: 217 GTNTDRSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLNDGTVLAWGNNDYGQLGDGTNT 276

Query: 268 DVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
           + N P  +  +  +      +  A G  H L L  DG VL  G +  G L D     S  
Sbjct: 277 ESNVPVQVKGTGGYGVLNNVAAIAAGGFHSLALLNDGTVLAWGNNESGQLGDGSNSDSDI 336

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
           P++V+    SN        IA G +HS
Sbjct: 337 PVTVSGLTNSN-------TIAGGGDHS 356



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 162/387 (41%), Gaps = 59/387 (15%)

Query: 34  VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +  +SWG    GQLG G   D   P  +N  S +S+++   G  H L++ S      G V
Sbjct: 1   MTTFSWGNNEFGQLGDGTNIDSNVPVSVN-GSTNSIAITG-GIFHSLSVLS-----DGLV 53

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            +WG   SGQLG G + D+  P+ VT           ++AG  HS  +  +  +   GD 
Sbjct: 54  CAWGANYSGQLGDGTLNDSNIPEIVTAL----TNAIEVAAGVFHSLALLSNSTVRAWGDN 109

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G + S + PV V    N     I+ G+ HSL LL D     V  +G    GQL
Sbjct: 110 FAGQLGDGTFNSSTVPVSVIGLTNA--IAISAGLNHSLALLND---GTVRAWGGNFFGQL 164

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNC 271
           G   D   +   P + +GL +  +V +SA G+ S AL  +G +  WG  ++       N 
Sbjct: 165 GNGTDITSNA--PVIILGLSN--VVAVSAGGEHSLALLYDGTVCAWGANYSGQLGDGTNT 220

Query: 272 PQSLPSSL----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
            +S+P  +          +    + G  H L L  DG VL  G + +G L D     S  
Sbjct: 221 DRSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLNDGTVLAWGNNDYGQLGDGTNTESNV 280

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P+     +V    G  V+   A     A+  G FH + L                   + 
Sbjct: 281 PV-----QVKGTGGYGVLNNVA-----AIAAGGFHSLALL-----------------NDG 313

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            ++ WG  E GQLG G+  D   P  V
Sbjct: 314 TVLAWGNNESGQLGDGSNSDSDIPVTV 340



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
           V +WGA   GQLG G   D   P Q+  +     L++V  ++ G  H LAL +      G
Sbjct: 203 VCAWGANYSGQLGDGTNTDRSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLN-----DG 257

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGCLFT 149
            V +WG    GQLG G   ++  P  V    G+     +  I+AG  HS  + + G +  
Sbjct: 258 TVLAWGNNDYGQLGDGTNTESNVPVQVKGTGGYGVLNNVAAIAAGGFHSLALLNDGTVLA 317

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            G+   GQLG G       PV VS   N N   IA G  HSL
Sbjct: 318 WGNNESGQLGDGSNSDSDIPVTVSGLTNSNT--IAGGGDHSL 357


>gi|355566686|gb|EHH23065.1| Guanine nucleotide exchange factor-related protein [Macaca mulatta]
          Length = 458

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 166/399 (41%), Gaps = 70/399 (17%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F+WG  S GQLG G   D L P+ +  F   R ++  I+ G  HS  V+D G LF CG 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDIGDLFVCGL 75

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G            S     + Q+ACG   +++L ++    QV   GS   GQ
Sbjct: 76  NKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIILTEN---GQVLSCGSNSFGQ 132

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LGV     R V +PQ  I LH  ++V I+A    + A +A G ++ WG G  S     CP
Sbjct: 133 LGVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWGTGLASCGRRLCP 190

Query: 273 -QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            Q+LP           + L  S+A     G +H   LT  GEV + G + HG L+     
Sbjct: 191 GQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLATE--- 247

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEH--SAVVTGK-FHWVRL-------------- 360
           ++  P+   +E        KV  + +G  H  +   TGK F W R               
Sbjct: 248 AAFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEG 306

Query: 361 -FIISYTPFFP--------PFFINVIA----------ENRAIM-----TWGWGEHGQLGL 396
             +     F P        P  ++ +            N A++     +WGW EHG  G 
Sbjct: 307 WKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHNLAVIGGVCYSWGWNEHGMCGD 366

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G   +   PK V    +     + L V CG+G + A+ +
Sbjct: 367 GTEANIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)

Query: 35  KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
           KV++WG    GQLG              D   P  +LLN     L  L+  + ++CG  H
Sbjct: 285 KVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEH 344

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
            LA      VIGG  +SWG    G  G G   +   PKPV               GH   
Sbjct: 345 NLA------VIGGVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLA 398

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +  + A   H   V D    +   D T
Sbjct: 399 LCQLPA---HPALVQDPKVTYLSPDAT 422



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 23/177 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           +V+ WG+   GQL T      + PQ +      +  V+ +  G  H++A T       GK
Sbjct: 232 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTET-----GK 285

Query: 93  VFSWGRGSSGQLGHG---------EMVDALYPKPVTFFDG----HRYT-ITHISAGWNHS 138
           VF+WGR   GQLG           E  D+  P      +     H  T  T +S G  H+
Sbjct: 286 VFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHN 345

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
             V    C ++ G    G  G G   +  +P  V + ++ +   + CG  HSL L +
Sbjct: 346 LAVIGGVC-YSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 174/425 (40%), Gaps = 101/425 (23%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS----------MLACGGAHVLALTS 84
            K+++WG  + G LG G       P +   ++ + VS           +ACG  H +ALT+
Sbjct: 814  KLYTWGHSSYGCLGVG-------PHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTT 866

Query: 85   PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                    V+SWG    GQLG G    A YP  V         I  +SAG  HS  +S S
Sbjct: 867  ------NGVYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNE--LIVSVSAGQYHSLAISAS 918

Query: 145  GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G L+T G G +GQLGHG       P  + S  N+N+     G  HS++L  +    +V+ 
Sbjct: 919  GQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSN---GKVFT 975

Query: 205  FGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            FGSG  GQLG  S  +I S   P    GL +  I  I      + ALS  G LYTWG   
Sbjct: 976  FGSGSFGQLGNGSTTKITS---PVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWG--- 1028

Query: 264  NSTSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-----GDGEVLMLGGSHHGMLSDPERV 317
                      S P  L F +Q+     + LVL       D E+  L     G+L      
Sbjct: 1029 ----------SSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTAD-DGLLH----- 1072

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV--TGKFHWVRLFIISYTPFFPPFFIN 375
                 LS  L   S++ G  + Q+  G  HSAV+  TG+ +                   
Sbjct: 1073 -----LSPTLVDTSHISG-DIFQMCCGCHHSAVISTTGQLY------------------- 1107

Query: 376  VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ-------LEVFCGSG 428
                     TWG    GQLG+    +++ P V  +G      D+         EV CG+ 
Sbjct: 1108 ---------TWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGAD 1158

Query: 429  FTYAI 433
            FT A+
Sbjct: 1159 FTLAL 1163



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 118/269 (43%), Gaps = 58/269 (21%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
            ++W+WG G  GQLG G + D   P+LL   SL + ++++  G  +H + LTS      GK
Sbjct: 920  QLWTWGWGVYGQLGHGAIDDCEKPKLL--KSLENENIISAYGGYSHSIILTS-----NGK 972

Query: 93   VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG- 151
            VF++G GS GQLG+G       P PV    G    I  I   + H+  +SD G L+T G 
Sbjct: 973  VFTFGSGSFGQLGNGSTTKITSPVPVY---GLPEPIKCIYTAYFHNLALSDVGRLYTWGS 1029

Query: 152  ----------------------------DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQ 182
                                        D     L   D   H SP  V +S ++ ++ Q
Sbjct: 1030 SPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQ 1089

Query: 183  IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT-IGLHDIEIVGIS 241
            + CG  HS V+       Q+Y +G    GQLGVS  R R V  P VT +G   + +   S
Sbjct: 1090 MCCGCHHSAVI---STTGQLYTWGLNLDGQLGVSGIRERLV--PTVTLVGPPSVIVDSSS 1144

Query: 242  ANG----------DRSAALSAEGHLYTWG 260
             +G          D + AL A   L+ WG
Sbjct: 1145 TSGSLIKEVRCGADFTLALDAANKLWGWG 1173



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 64/258 (24%)

Query: 12   GKSALINNAKPKIEEEEEEQQVV----------------KVWSWGAGTDGQLGTGRLHDE 55
            G  A+ +  KPK+ +  E + ++                KV+++G+G+ GQLG G     
Sbjct: 933  GHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKI 992

Query: 56   LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG-------------RGSSG 102
             SP  +       +  +     H LAL+       G++++WG             + +  
Sbjct: 993  TSPVPV-YGLPEPIKCIYTAYFHNLALSD-----VGRLYTWGSSPQVLRFHAQSQKRARN 1046

Query: 103  QL--GHGEMVDALYPKPVTFFDGHRY------TITHIS-------AGWNHSGFVSDSGCL 147
            QL    G+  D      +T  DG  +        +HIS        G +HS  +S +G L
Sbjct: 1047 QLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQL 1106

Query: 148  FTCGDGTFGQLGHGDYRSHSSP-----------VKVSSFVNKNVHQIACGMRHSLVLLKD 196
            +T G    GQLG    R    P           V  SS     + ++ CG   +L L   
Sbjct: 1107 YTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDA- 1165

Query: 197  CLGNQVYGFGSGKRGQLG 214
               N+++G+GS   GQLG
Sbjct: 1166 --ANKLWGWGSNHEGQLG 1181


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +    G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 78  LGLGDVQSTIEPRRLDSLSGKKIASLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P ++S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   +  
Sbjct: 137 NHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
               +VT  L +  +V I+       A+   G +Y WG         G +      C  +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVA 252

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 308 -DRIIEIAA 315



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 107/273 (39%), Gaps = 43/273 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATT--EGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V   Q++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST +   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P  VA      L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPCRVAA-----LQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +   +  WG   +GQLG GN  +Q +P  V +
Sbjct: 274 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV 305


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 148/327 (45%), Gaps = 24/327 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G       P+L++  + S+V +  CG  H  A+T+      G ++
Sbjct: 319 QMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTA-----SGDLY 373

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  ++G LG G    A + KPV          +  IS G  H+ FV+  G LFT G
Sbjct: 374 AWGDGDHNAGLLGLGS--GASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 431

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL----KDCLGNQVYGFGS 207
           DGTFG LGHGD  S + P +V +       + ACG+ HS  ++    +     +++ +G 
Sbjct: 432 DGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGD 491

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           G  G+LG      R +  P     L       ++     + ALS  G +Y  G    S  
Sbjct: 492 GDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHD 549

Query: 268 DVNCPQSLPSSL--SFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            V  P  +   L  SF Q  A G++H+ VL    EV   G   +G L   +      P  
Sbjct: 550 IVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTL 609

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVV 351
           V       L G +V ++  G+ ++A +
Sbjct: 610 VKA-----LKGKQVRKVVCGSNYTATI 631



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 184/438 (42%), Gaps = 82/438 (18%)

Query: 28  EEEQQVVKVWSWGAGT-DGQLGTGR---------LHDELSPQLLNLSSLSSVSMLACGGA 77
           E+ + +  V+ WG    DG LG G          + D   P++L          ++CG  
Sbjct: 250 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 309

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           + + +T       G+++SWG  S G+LGHG      +PK +  F+G   T+     G  H
Sbjct: 310 YAVLVTKQ-----GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGS--TVELADCGEFH 362

Query: 138 SGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
           +  V+ SG L+  GDG    G LG G   SH  PV++        V  I+CG  H+  + 
Sbjct: 363 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 422

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL---- 250
            +    +++ FG G  G LG   DRI S ++P+    L+    +  +     SAA+    
Sbjct: 423 SE---GKLFTFGDGTFGALG-HGDRI-STNIPREVEALNGCRTIKAACGVWHSAAVVSVF 477

Query: 251 ---SAEGHLYTWGRGFNST---SDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDG 298
              ++ G L+TWG G +      D+ C + +PS +      SF Q A G +  + L+  G
Sbjct: 478 GEATSSGKLFTWGDGDDGRLGHGDIEC-RLIPSCVTELDTTSFQQVACGQSITVALSMSG 536

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
           +V  +G       +DP       P  +       L    V ++A G  H AV+  K    
Sbjct: 537 QVYAMG------TADPSHDIVRAPSCIE----GGLGKSFVQEVACGFHHIAVLNSK---- 582

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                              AE   + TWG G +GQLG G+T  +  P +V      Q R 
Sbjct: 583 -------------------AE---VYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVR- 619

Query: 419 TQLEVFCGSGFTYAISRH 436
              +V CGS +T  I  H
Sbjct: 620 ---KVVCGSNYTATICLH 634


>gi|355752291|gb|EHH56411.1| Guanine nucleotide exchange factor-related protein [Macaca
           fascicularis]
          Length = 458

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 166/399 (41%), Gaps = 70/399 (17%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F+WG  S GQLG G   D L P+ +  F   R ++  I+ G  HS  V+D G LF CG 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDIGDLFVCGL 75

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G            S     + Q+ACG   +++L ++    QV   GS   GQ
Sbjct: 76  NKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIILTEN---GQVLSCGSNSFGQ 132

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LGV    +R   +PQ  I LH  ++V I+A    + A +A G ++ WG G  S     CP
Sbjct: 133 LGVPHG-LRRCVVPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWGTGLASCGRRLCP 190

Query: 273 -QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            Q+LP           + L  S+A     G +H   LT  GEV + G + HG L+     
Sbjct: 191 GQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLATE--- 247

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEH--SAVVTGK-FHWVRL-------------- 360
           ++  P+   +E        KV  + +G  H  +   TGK F W R               
Sbjct: 248 AAFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEG 306

Query: 361 -FIISYTPFFP--------PFFINVIA----------ENRAIM-----TWGWGEHGQLGL 396
             +     F P        P  ++ +            N A++     +WGW EHG  G 
Sbjct: 307 WKLEKQDTFLPCSRLLNNMPSSLHCLTGATEVSCGSEHNLAVIGGVCYSWGWNEHGMCGD 366

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G   +   PK V    +     + L V CG+G + A+ +
Sbjct: 367 GTEANIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)

Query: 35  KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
           KV++WG    GQLG              D   P  +LLN     L  L+  + ++CG  H
Sbjct: 285 KVFTWGRADYGQLGRKLETYEGWKLEKQDTFLPCSRLLNNMPSSLHCLTGATEVSCGSEH 344

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
            LA      VIGG  +SWG    G  G G   +   PKPV               GH   
Sbjct: 345 NLA------VIGGVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLA 398

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +  + A   H   V D    +   D T
Sbjct: 399 LCQLPA---HPALVQDPKVTYLSPDAT 422



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 23/177 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           +V+ WG+   GQL T      + PQ +      +  V+ +  G  H++A T       GK
Sbjct: 232 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTET-----GK 285

Query: 93  VFSWGRGSSGQLGHG-EMVDAL-YPKPVTFFDGHRYT------------ITHISAGWNHS 138
           VF+WGR   GQLG   E  +     K  TF    R               T +S G  H+
Sbjct: 286 VFTWGRADYGQLGRKLETYEGWKLEKQDTFLPCSRLLNNMPSSLHCLTGATEVSCGSEHN 345

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
             V    C ++ G    G  G G   +  +P  V + ++ +   + CG  HSL L +
Sbjct: 346 LAVIGGVC-YSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 14/227 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWGAG  G+LG G    +  P  + L     V+ +  G ++  A++S      G++F
Sbjct: 599 EVYSWGAGEGGRLGHGDTASKEVPTKIALEK--QVTAIYAGASYSAAVSSV-----GELF 651

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGRG+ G+LGHG   D   P  V     ++     + +G  HS  V+D G LF  GDG 
Sbjct: 652 TWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGD 711

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FG+LG+G       PV++      +V +I  G + S+ L  D     +Y +G G  G+LG
Sbjct: 712 FGKLGNGSCNGSPLPVQIEGV--SSVARIYSGSQFSVALSYD---GTLYSWGKGHGGRLG 766

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
                  +V  P++   L   +IV ++       AL++ G LY WGR
Sbjct: 767 HGNSEHSNV--PKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGR 811



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 174/430 (40%), Gaps = 61/430 (14%)

Query: 25   EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALT 83
            +E+   +   KV  WG     QLG  +      P   + LS L  + +   GG+  L + 
Sbjct: 2898 DEQSSNEISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--SGGSKSLFIV 2955

Query: 84   SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
            S      GK+++ G G++G+LG G   +   P+ V   + +      + +G  H+  ++ 
Sbjct: 2956 SQD----GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTL 3011

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
             G +F+ G+G  G+LGHG+  +   P  + S   K +  IACG  HS  +       ++Y
Sbjct: 3012 DGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITS---SGELY 3068

Query: 204  GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW- 259
             +G G+ G+LG   D    +  P++   L    +V + A G R A    L+ EG +++W 
Sbjct: 3069 TWGLGEYGRLG-HGDNCTQLK-PKLVTALQGHRVVQV-ACGSRDAQTLCLTEEGLVFSWG 3125

Query: 260  -------GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                   GRG +    V       + +   Q   G    L LT  GEV   G   +  L 
Sbjct: 3126 DGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLG 3185

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
                    +P       +  L G KVI +A GA H   VT                    
Sbjct: 3186 HGTDQHVRKP-----TPIQGLRGKKVIHVAVGALHCLAVT-------------------- 3220

Query: 373  FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTY 431
                  ++  +  WG  +HGQ G GNT     P  V+ L   F NR     V CGS  + 
Sbjct: 3221 ------DSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNR-----VACGSSHSV 3269

Query: 432  AISRHCLPSQ 441
            A S    PS+
Sbjct: 3270 AWSLPQNPSE 3279



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 104/248 (41%), Gaps = 41/248 (16%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V+SWG G DG+LG G       P+L+   S   V  +ACG AH   +TS      G V 
Sbjct: 4051 EVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITS-----QGHVL 4105

Query: 95   SWGRGSSGQLGHGEMVDALYPK-------------------------------PVTFFDG 123
            +WG+G  G+LGHG+  D L PK                               P+     
Sbjct: 4106 TWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESL 4165

Query: 124  HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
                +  +  G   S  ++ SG ++T G G + +LGHG+      P KV++   K +  I
Sbjct: 4166 AGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISI 4225

Query: 184  ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
            A G  H  V   D    +V+ +G    GQLG     + ++  P++   L    IV +   
Sbjct: 4226 ATGSLHC-VACSD--SGEVFTWGDNDEGQLG--DGTVTAIQRPRLVQSLQGKHIVKVICG 4280

Query: 244  GDRSAALS 251
               + ALS
Sbjct: 4281 SAHTLALS 4288



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 133/316 (42%), Gaps = 71/316 (22%)

Query: 43  TDGQLGT--GRLHDELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGR 98
           T GQL +      + ++P+L+  L  +S + + A C G H +AL+S      G+V+SWG 
Sbjct: 551 TSGQLYSIHSSCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSS-----AGEVYSWGA 605

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
           G  G+LGHG+      P  +         +T I AG ++S  VS  G LFT G GT+G+L
Sbjct: 606 GEGGRLGHGDTASKEVPTKIAL----EKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRL 661

Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
           GHG+      P +V +     V  +A G    HS+ +     G  ++ +G G  G+LG  
Sbjct: 662 GHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTD---GGLLFAWGDGDFGKLG-- 716

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
                   LP    G+  +    I +    S ALS +G LY+WG+               
Sbjct: 717 NGSCNGSPLPVQIEGVSSV--ARIYSGSQFSVALSYDGTLYSWGK--------------- 759

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
                              G G  L  G S H  +  P+ V +             L+G 
Sbjct: 760 -------------------GHGGRLGHGNSEHSNV--PKLVHA-------------LEGK 785

Query: 337 KVIQIAAGAEHSAVVT 352
           K++ +A G+ H   +T
Sbjct: 786 KIVDVAVGSAHCLALT 801



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 127/312 (40%), Gaps = 59/312 (18%)

Query: 131  ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
            +++G  H   +S  G +F+ G+G  G+LGHG+  S+  P  + +     V  IACG  HS
Sbjct: 4036 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHS 4095

Query: 191  LVLLKDCLGNQ--VYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
                  C+ +Q  V  +G G+ G+L  G S+D+++       T  +  + +  I A+   
Sbjct: 4096 A-----CITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAE 4150

Query: 247  SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
               + A   +            V C      +L+ S +   W       G G+   LG  
Sbjct: 4151 EVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTW-------GKGDYHRLG-- 4201

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             HG  +D  R    RP     +KV+ L G K+I IA G+ H    +              
Sbjct: 4202 -HGN-TDHVR----RP-----KKVAALQGKKIISIATGSLHCVACS-------------- 4236

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 426
                        ++  + TWG  + GQLG G       P++V      Q +   ++V CG
Sbjct: 4237 ------------DSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQ---SLQGKHI-VKVICG 4280

Query: 427  SGFTYAISRHCL 438
            S  T A+S + L
Sbjct: 4281 SAHTLALSTYQL 4292



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 112/292 (38%), Gaps = 56/292 (19%)

Query: 75   GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
            GG H LAL+S      G+VFSWG G  G+LGHG       PK +    G    +  I+ G
Sbjct: 4039 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSG--IGVVDIACG 4091

Query: 135  WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP------------VKVSSFVNKNVHQ 182
              HS  ++  G + T G G +G+LGHGD      P            V V++ +     +
Sbjct: 4092 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEE 4151

Query: 183  IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
            +  G R S + ++   G  V     G   Q  V+  R  SV     T G  D   +    
Sbjct: 4152 VPMGAR-SPMKIESLAGLGVIKVECG--SQFSVALTRSGSV----YTWGKGDYHRL---- 4200

Query: 243  NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEV 300
                               G  +T  V  P+ + +         A G  H +  +  GEV
Sbjct: 4201 -------------------GHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEV 4241

Query: 301  LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
               G +  G L D    +  RP       V +L G  ++++  G+ H+  ++
Sbjct: 4242 FTWGDNDEGQLGDGTVTAIQRP-----RLVQSLQGKHIVKVICGSAHTLALS 4288



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 117/278 (42%), Gaps = 70/278 (25%)

Query: 154 TFGQLGHGDYRSHSS------PVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGF 205
           T GQL    Y  HSS      P  V      +V QIA  C  RH++ L       +VY +
Sbjct: 551 TSGQL----YSIHSSCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSS---AGEVYSW 603

Query: 206 GSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G+G+ G+LG     SK+    ++L +        ++  I A    SAA+S+ G L+TWGR
Sbjct: 604 GAGEGGRLGHGDTASKEVPTKIALEK--------QVTAIYAGASYSAAVSSVGELFTWGR 655

Query: 262 G------FNSTSDVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLGGSHHGML 311
           G        ++ D   P  + +  ++     ALG    H + +T  G +   G    G L
Sbjct: 656 GTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKL 715

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
            +     S  PL V +E VS+     V +I +G++ S              +SY      
Sbjct: 716 GNGSCNGS--PLPVQIEGVSS-----VARIYSGSQFSVA------------LSY------ 750

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                   +  + +WG G  G+LG GN+     PK+V+
Sbjct: 751 --------DGTLYSWGKGHGGRLGHGNSEHSNVPKLVH 780



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 37/146 (25%)

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            H + L+  GEV   G    G L   +  S   P  +ALEK       +V  I AGA +S
Sbjct: 589 RHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEK-------QVTAIYAGASYS 641

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A V+                        + E   + TWG G +G+LG GN+ D+  P  V
Sbjct: 642 AAVSS-----------------------VGE---LFTWGRGTYGRLGHGNSDDKFVPTQV 675

Query: 409 NLGDEFQNRDTQLEVFCGSGFTYAIS 434
                ++  D  L    GSG  ++++
Sbjct: 676 QALKAYKVVDVAL----GSGDAHSMA 697


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 42/310 (13%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
           LG G++   + P+ +    G +  I  +S G   H    +  G +FT G   + QLG+G 
Sbjct: 78  LGLGDVQSTIEPRRLDSLSGKK--IASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135

Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                 P ++S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   + 
Sbjct: 136 TNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVN 191

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
                +VT  L +  +V I+       A+   G +Y WG         G +      C  
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251

Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
           +    +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK    
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK---- 307

Query: 334 DGVKVIQIAA 343
              ++I+IAA
Sbjct: 308 --DRIIEIAA 315



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 43/273 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATT--EGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V   Q++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST +   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +   +  WG   +GQLG GN  +Q +P  V +
Sbjct: 274 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV 305


>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
          Length = 287

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 38/272 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDEL----------SPQLLNLSSLSSVSMLACGGAHVLALTSP 85
           V ++G   DGQLGTG     +           PQ ++      V  ++CG  H +AL + 
Sbjct: 5   VITFGCNDDGQLGTGAKRRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTMALAAS 64

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
                G V+SWG GS GQLGHG++     P+ V FF+ +   + +IS G  HS  V+  G
Sbjct: 65  -----GAVYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSAAVTKDG 119

Query: 146 CLFTCGDGTFGQLG---HGDYRSHSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLG 199
            L+  G+  +GQLG     +    S PV+         + + +++CG  H+  L      
Sbjct: 120 TLYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNH--- 176

Query: 200 NQVYGFGSGKRGQLGV--------SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +VY +G G  GQLG+          + +   S PQ+  G +   +V ++     SAA++
Sbjct: 177 GRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSAAVT 236

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPS 277
            +G++Y W +      G   +SD   P+S  S
Sbjct: 237 EKGYVYIWXKEDYGMLGIGQSSDXQNPKSASS 268



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 133/333 (39%), Gaps = 92/333 (27%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-------------HRYTITHISAGWNHSG 139
           V ++G    GQLG G        +P+   DG                 +  +S G  H+ 
Sbjct: 5   VITFGCNDDGQLGTGAK-----RRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTM 59

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDC 197
            ++ SG +++ G G+ GQLGHGD +S + P KV  F      V+ I+CG  HS  + KD 
Sbjct: 60  ALAASGAVYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSAAVTKD- 118

Query: 198 LGNQVYGFGSGKRGQLGVSKD-RIRSVSLP---QVTIGLHDIEIVGISANGDRSAALSAE 253
               +Y +G    GQLG+ K+      SLP    +  GL    IV +S  G  +AAL+  
Sbjct: 119 --GTLYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNH 176

Query: 254 GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           G +Y WGRG                                  D   L +G +      D
Sbjct: 177 GRVYIWGRG----------------------------------DSGQLGIGSTWFNNTED 202

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
              + ++RP     + +   +G +V+Q+A GA HSA VT K +                 
Sbjct: 203 ESLLRTSRP-----QLLDGFNGERVVQVACGAFHSAAVTEKGY----------------- 240

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
                    +  W   ++G LG+G + D  +PK
Sbjct: 241 ---------VYIWXKEDYGMLGIGQSSDXQNPK 264



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 29/161 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELS---------PQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           ++ WG    GQLG  + H+            P+ L    +  VS   CGG H  ALT+  
Sbjct: 121 LYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVS---CGGTHTAALTNH- 176

Query: 87  SVIGGKVFSWGRGSSGQLGHGE----------MVDALYPKPVTFFDGHRYTITHISAGWN 136
               G+V+ WGRG SGQLG G           ++    P+ +  F+G R  +  ++ G  
Sbjct: 177 ----GRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGER--VVQVACGAF 230

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
           HS  V++ G ++      +G LG G      +P   SSF +
Sbjct: 231 HSAAVTEKGYVYIWXKEDYGMLGIGQSSDXQNPKSASSFFD 271



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)

Query: 35  KVWSWGAGTDGQLGTG-----RLHDEL-----SPQLLNLSSLSSVSMLACGGAHVLALTS 84
           +V+ WG G  GQLG G        DE       PQLL+  +   V  +ACG  H  A+T 
Sbjct: 178 RVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSAAVTE 237

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFD 122
                 G V+ W +   G LG G+  D   PK   +FFD
Sbjct: 238 K-----GYVYIWXKEDYGMLGIGQSSDXQNPKSASSFFD 271


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 25/328 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG  + G+LG G       P+L++    S+V +  CG  H  A+T+      G ++
Sbjct: 324 QLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTT-----SGDLY 378

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  ++G LG G    A + KPV          +  IS G  H+ FV+ +G LFT G
Sbjct: 379 AWGDGDHNAGLLGLGS--GASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFG 436

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL----KDCLGNQVYGFGS 207
           DGTFG LGHGD  S + P +V +       + ACG+ HS  ++    +     +++ +G 
Sbjct: 437 DGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGD 496

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           G  G+LG     I S  +P     L       ++     + ALS  G +Y  G    S  
Sbjct: 497 GDDGKLG--HGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQD 554

Query: 268 D-VNCPQSLPSSL--SFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           D V  P  +   L  SF Q  A G++H+ VL    EV   G   +G L   +      P 
Sbjct: 555 DVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPT 614

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVV 351
                 V  L G +V ++  G+ ++A +
Sbjct: 615 -----LVKALKGKQVRKVVCGSNYTATI 637



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 184/438 (42%), Gaps = 81/438 (18%)

Query: 28  EEEQQVVKVWSWGAGT-DGQLGTGR---------LHDELSPQLLNLSSLSSVSMLACGGA 77
           E+ + +  V+ WG    DG LG G          + D   P++L          ++CG  
Sbjct: 255 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 314

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           + + +T       G+++SWG  S G+LGHG      +PK +  FDG   T+     G  H
Sbjct: 315 YAVLVTKQ-----GQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGS--TVELADCGEFH 367

Query: 138 SGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
           +  V+ SG L+  GDG    G LG G   SH  PV++       NV  I+CG  H+  + 
Sbjct: 368 TCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVT 427

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL---- 250
                 +++ FG G  G LG   DRI S ++P+    L+    +  +     SAA+    
Sbjct: 428 S---AGKLFTFGDGTFGALG-HGDRI-STNIPREVEALNGCRTIRTACGVWHSAAVVSVF 482

Query: 251 ---SAEGHLYTWGRGFNST---SDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDG 298
              S+ G L+TWG G +      D+   + +P S+      SF Q A G +  + L+  G
Sbjct: 483 GEASSSGKLFTWGDGDDGKLGHGDI-ASRLIPLSVTELDTTSFQQVACGQSITVALSMSG 541

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
           +V  +G       +DP +    R  S        L    V ++A G  H AV+  K    
Sbjct: 542 QVYAMG------TADPSQDDVVRAPSCI---EGGLGKSFVQEVACGYHHIAVLNSK---- 588

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                              AE   + TWG G +GQLG G+T  +  P +V      Q R 
Sbjct: 589 -------------------AE---VYTWGKGSNGQLGHGDTEYRRMPTLVKALKGKQVR- 625

Query: 419 TQLEVFCGSGFTYAISRH 436
              +V CGS +T  I  H
Sbjct: 626 ---KVVCGSNYTATICLH 640


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 25/249 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V ++G +F  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVNTGEVFVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-------- 262
           LG      +S   P V      IEI    +    SAA +  GH+Y WG  RG        
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQCRGQSVTLPHL 323

Query: 263 --FNSTSDV 269
             F+ST DV
Sbjct: 324 THFSSTDDV 332



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 22/272 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSG-PHIVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G   +   P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G ++ WG     
Sbjct: 153 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           + + P  V +EK       ++I+IAA   HSA
Sbjct: 272 NQSYPTPVVVEK------DRIIEIAAC--HSA 295



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATT--EGEVFTWG 100

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 101 HNAYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 160 VGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSG 219

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 220 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 249

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 250 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPV 279


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H ++ 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIF 364



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 62/232 (26%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT        ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGV 215
                                   C  N          +Y FG G+ G+LG+
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 33/336 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   + + P+L+     +++  +ACG  H  A+T     + G+++
Sbjct: 298 EVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVT-----MAGELY 352

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG G  ++G LGHG  V    PK +    +G    I  ++ G  H+  ++ +G LFT G
Sbjct: 353 TWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEG--LQIAFVACGPWHTALITSTGQLFTFG 410

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK--------DCLGNQVY 203
           DGTFG LGHGD ++ S P +V S +      +ACG+ H+  +++             +++
Sbjct: 411 DGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLF 470

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT----- 258
            +G G + +LG      R    P     L D     I+     +  L+  G ++T     
Sbjct: 471 TWGDGDKNRLGHGDKEARLK--PTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTV 528

Query: 259 WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           +G+  +S SD   P  +   +   S  + A G  HV VLT   EV   G   +G L   +
Sbjct: 529 YGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 588

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
                 P   AL  V  L    V  IA G+ +SA +
Sbjct: 589 IEDRKTP---AL--VEALKDRHVKYIACGSNYSAAI 619



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 181/405 (44%), Gaps = 69/405 (17%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACG  H   +T       G+VF+WG  S G+LGHG   + +
Sbjct: 265 DVLLPRPLESNVVLDVHHIACGVRHASLVTRQ-----GEVFTWGEESGGRLGHGVGKNVV 319

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVK 171
            P+ V        TI  ++ G  HS  V+ +G L+T GDG    G LGHG   SH  P +
Sbjct: 320 QPRLVEALIS--TTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKR 377

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           ++  +    +  +ACG  H+ ++       Q++ FG G  G LG   DR ++VS P+   
Sbjct: 378 IAGPLEGLQIAFVACGPWHTALITST---GQLFTFGDGTFGVLG-HGDR-QNVSYPREVE 432

Query: 231 GLHDIEIVGISANGDRSAALS-----------AEGHLYTWGRGFNST-----SDVNCPQS 274
            L  +  + ++     +AA+            + G L+TWG G  +       +     +
Sbjct: 433 SLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPT 492

Query: 275 LPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
             S+L   +F + A G +  + LT  G V  +G + +G L     +S  +   +  +K++
Sbjct: 493 CVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLG--SSLSDGKVPCLVGDKIA 550

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
              G  + +IA GA H AV+T K                            + TWG G +
Sbjct: 551 ---GESIEEIACGAYHVAVLTSK--------------------------NEVYTWGKGAN 581

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           G+LG G+  D+  P +V   +  ++R  +  + CGS ++ AI  H
Sbjct: 582 GRLGHGDIEDRKTPALV---EALKDRHVKY-IACGSNYSAAICLH 622


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 173/398 (43%), Gaps = 80/398 (20%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----------VSMLACGGAHVLALTS 84
           +++ +G   DGQLG      E   Q++ +  L            V  +A G  H L L+ 
Sbjct: 5   QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVD---ALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
                 GKV+S G   +G+LG G + +    +YP  ++       +I  ISAG +HS  V
Sbjct: 65  -----DGKVWSCGSNYNGELGRGGVREGSYTIYPVHIS----STVSIIQISAGRSHSMAV 115

Query: 142 SDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           SD G LF  G  + GQL   GD  +  +P +V S       Q+ACG  H++ L     G 
Sbjct: 116 SDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSL--PETVQVACGASHTVSLNG---GG 170

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +V+ +G    G       RIR  S  +V I +  I IV ISA    + AL+A G L+ WG
Sbjct: 171 RVFIWGQQSDG-------RIRH-SPAEVEIFI-SIPIVQISAGNLFTMALTASGTLFAWG 221

Query: 261 R------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-- 312
           +      G  +  DV  P ++P+  S      G +H + LT +G V   G    G L   
Sbjct: 222 KNEEGQLGDFTNKDVVNPCAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG 281

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV-TGKFHWVRLFIISYTPFFPP 371
            P R  +       +  ++ + G  V +IA G  H+ VV  GK H               
Sbjct: 282 QPNRSQN------CMRGITEMLGSHVTRIACGRCHTIVVANGKMH--------------- 320

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                        T+G   +GQLG GNT +QI P+V++
Sbjct: 321 -------------TFGLNSNGQLGHGNTRNQITPRVID 345


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 166/392 (42%), Gaps = 70/392 (17%)

Query: 72   LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
            +ACG  H+  +T       G+VF+W   + G+LGHG  VD   PK V F       I  +
Sbjct: 1207 IACGVRHIALVTRQ-----GEVFTWEEEAGGRLGHGIQVDVCRPKLVEFL--ALTNIDFV 1259

Query: 132  SAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMR 188
            + G  H+  VS SG LFT GDG    G LGHG   SH  P +VS  V    V  +ACG  
Sbjct: 1260 ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTW 1319

Query: 189  HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ---VTIGLHDIEI-------V 238
            HS +   +    +++ FG G  G LG   DR  SVS P+   +  GL  +++       V
Sbjct: 1320 HSALATAN---GKLFTFGDGAFGVLG-HGDR-ESVSYPKEVKMLSGLKTLKVACGVWHTV 1374

Query: 239  GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNH 290
             I    +++   ++   L+TWG G  +       ++  LP+ +S      F+Q A G   
Sbjct: 1375 AIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTF 1434

Query: 291  VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
             + LT  G V  +GG+ HG L      SS     +       L G  V +I+ G  H AV
Sbjct: 1435 TVALTTSGHVFTMGGTSHGQLG-----SSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAV 1489

Query: 351  VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +T +                            + TWG G +G+LG G+  D+  P +V  
Sbjct: 1490 LTSR--------------------------SEVFTWGKGSNGRLGHGDKDDRKTPTLVEA 1523

Query: 411  GDEFQNR------DTQLEVFCGSGFTYAISRH 436
              E   +      D  +   C   F +   RH
Sbjct: 1524 LRERHVKSISCGADQSVCSGCRQAFGFTRKRH 1555



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 150/332 (45%), Gaps = 32/332 (9%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++W     G+LG G   D   P+L+   +L+++  +ACG  H  A+++      G +F
Sbjct: 1222 EVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVST-----SGDLF 1276

Query: 95   SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +WG G  + G LGHG  +    PK V+   +G    +  ++ G  HS   + +G LFT G
Sbjct: 1277 TWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG--LQVLSVACGTWHSALATANGKLFTFG 1334

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
            DG FG LGHGD  S S P +V         ++ACG+ H++ +++            +++ 
Sbjct: 1335 DGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFT 1394

Query: 205  FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
            +G G + +LG       +  LP     L D     I+     + AL+  GH++T      
Sbjct: 1395 WGDGDKNRLGHGNK--ETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSH 1452

Query: 260  GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
            G+  +S SD   P  +   L      + + G +HV VLT   EV   G   +G L   ++
Sbjct: 1453 GQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDK 1512

Query: 317  VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
                 P  V       L    V  I+ GA+ S
Sbjct: 1513 DDRKTPTLVEA-----LRERHVKSISCGADQS 1539



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 21/176 (11%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            K+++WG G   +LG G     L P  ++     + + +ACG    +ALT+      G VF
Sbjct: 1391 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTT-----SGHVF 1445

Query: 95   SWGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            + G  S GQLG     G++   +  + V  F      +  IS G +H   ++    +FT 
Sbjct: 1446 TMGGTSHGQLGSSNSDGKLPCLVQDRLVGEF------VEEISCGDHHVAVLTSRSEVFTW 1499

Query: 151  GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG-NQVYGF 205
            G G+ G+LGHGD     +P  V +   ++V  I+CG   S+     C G  Q +GF
Sbjct: 1500 GKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGADQSV-----CSGCRQAFGF 1550


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 12/194 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WG    GQLG G     ++ PQ++ NLS +  V + A G AH +AL+     + G 
Sbjct: 276 ELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISA-GKAHSMALS-----MSGN 329

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++SWGR   GQLG G      +P  +   D  +  +  ++ G +H+  ++  G +FT G 
Sbjct: 330 IYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQK--VEFLACGGSHTALLTKDGLVFTFGA 387

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  GQLGH   ++   P  V+      V QIACG +H+L  + D LG +V+ FGSGK GQ
Sbjct: 388 GKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSD-LG-KVFSFGSGKEGQ 445

Query: 213 LGVSKDRIRSVSLP 226
           LG      + + LP
Sbjct: 446 LGNGGTHNQLIPLP 459



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 120/264 (45%), Gaps = 48/264 (18%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           K + QI CG  HSL L K   G +++ +G    GQLG+   +  S+++PQ+   L  I +
Sbjct: 256 KXIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGIG-SQFASIAIPQIVENLSGIPL 311

Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
           V ISA    S ALS  G++Y+WGR      G   T   + P SL  +L   +    A G 
Sbjct: 312 VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFP-SLIEALDNQKVEFLACGG 370

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H  +LT DG V   G   HG L      +  RP       V+ L G +V QIA G +H+
Sbjct: 371 SHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRP-----RLVTELAGNRVTQIACGRQHT 425

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +  +++   + ++G G+ GQLG G T +Q+ P  +
Sbjct: 426 -------------------------LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPM 460

Query: 409 NLGDE----FQNRDTQLEVFCGSG 428
            L       F++R ++ E+   +G
Sbjct: 461 KLPSNEELTFESRASEKELIMIAG 484



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 28/265 (10%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYT 127
           +  + CG  H LAL+      GG++F+WG+   GQLG G    ++  P+ V    G    
Sbjct: 258 IIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSG--IP 310

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +  ISAG  HS  +S SG +++ G   FGQLG G       P  + +  N+ V  +ACG 
Sbjct: 311 LVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGG 370

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
            H+ +L KD L   V+ FG+GK GQLG   +++ +R    P++   L    +  I+    
Sbjct: 371 SHTALLTKDGL---VFTFGAGKHGQLGHNSTQNELR----PRLVTELAGNRVTQIACGRQ 423

Query: 246 RSAALSAE-GHLYTWGRGFNS--------TSDVNCPQSLPSS--LSFSQAALGWNHVLVL 294
            + A  ++ G ++++G G              +  P  LPS+  L+F   A     +++ 
Sbjct: 424 HTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELTFESRASEKELIMIA 483

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSS 319
            G+  +L+  G  +  ++   ++ +
Sbjct: 484 GGNQSILLWMGKKNSYVNLRRKIPT 508



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++GAG  GQLG     +EL P+L+   + + V+ +ACG  H LA  S      GKVFS
Sbjct: 382 VFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDL----GKVFS 437

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTF 120
           +G G  GQLG+G   + L P P+  
Sbjct: 438 FGSGKEGQLGNGGTHNQLIPLPMKL 462



 Score = 45.4 bits (106), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 52/214 (24%)

Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLP--SSLSFS 282
           L +  I+ I+     S ALS  G L+ WG+         +  + +  PQ +   S +   
Sbjct: 253 LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLV 312

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVKV 338
           Q + G  H + L+  G +   G +  G L    +D +   S          +  LD  KV
Sbjct: 313 QISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSL---------IEALDNQKV 363

Query: 339 IQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
             +A G  H+A++T                          ++  + T+G G+HGQLG  +
Sbjct: 364 EFLACGGSHTALLT--------------------------KDGLVFTFGAGKHGQLGHNS 397

Query: 399 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
           T +++ P++V   +   NR TQ+   CG   T A
Sbjct: 398 TQNELRPRLVT--ELAGNRVTQIA--CGRQHTLA 427


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 55/367 (14%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +++WG G++G LGHGE     +P  V    G    I  ++ G  H+  +S  G +F+ G 
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPHVVEALLGK--DIRKVACGATHTLALSKDGEVFSWGS 266

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G  G+LG G  R   +P+++    + N+ Q+AC   HS  +        ++ FG    GQ
Sbjct: 267 GYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQ 326

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-- 270
           LG+ +D++ + S  Q    L + +I  ++     SAAL+  G L+ W  G N +  +   
Sbjct: 327 LGIPEDKLLT-SYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLW--GCNESGQLGNG 383

Query: 271 --CPQSLPSSL---------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGM----LSDPE 315
                SLPS L         +  + A G  H   +T  G +   G + +G     L+D +
Sbjct: 384 NYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQ 443

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
               T  ++V +   ++    + + +A G  H+AVVT                       
Sbjct: 444 DDHVTYNVAVRVRVPTDF---RCVHVACGDSHTAVVT----------------------- 477

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA-IS 434
              +   I TWG G+ G+LG G+  ++  P  + +G E ++      V CG   T   ++
Sbjct: 478 ---DGGEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGMEGKHVRG---VSCGRAHTACTVT 531

Query: 435 RHCLPSQ 441
           R  +P Q
Sbjct: 532 RAWVPDQ 538



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 152/350 (43%), Gaps = 38/350 (10%)

Query: 30  EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
           ++    +++WG GT+G LG G    E  P ++       +  +ACG  H LAL+      
Sbjct: 203 KEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKD---- 258

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGC 146
            G+VFSWG G  G+LG G + D   P  +   +     +T ++    HS  V   S  G 
Sbjct: 259 -GEVFSWGSGYGGRLGQGHLRDRFTPIRICGLES--LNLTQVACNEFHSAAVCACSKQGA 315

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           LF+ G+  +GQLG  + +  +S ++ VSS     + ++ACG  HS  L +      ++ +
Sbjct: 316 LFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEH---GSLWLW 372

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE---IVGISANGDRSAALSAEGHLYTWGRG 262
           G  + GQLG       S SLP +    +D+    ++ ++     SA ++ +G ++  G  
Sbjct: 373 GCNESGQLG--NGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN 430

Query: 263 --------FNSTSD------VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
                    N   D      V     +P+       A G +H  V+T  GE+   G    
Sbjct: 431 TYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKG 490

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
           G L   + ++   P  + +     ++G  V  ++ G  H+A    +  WV
Sbjct: 491 GRLGHGDNLNRHLPTEIEI----GMEGKHVRGVSCGRAHTACTVTR-AWV 535


>gi|255569510|ref|XP_002525722.1| conserved hypothetical protein [Ricinus communis]
 gi|223535022|gb|EEF36705.1| conserved hypothetical protein [Ricinus communis]
          Length = 1050

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 159/339 (46%), Gaps = 44/339 (12%)

Query: 33  VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
             +V+SWG+G + QLGTG  H +  P  ++    S + +++    H +A+++      G+
Sbjct: 153 TTEVFSWGSGANYQLGTGNAHLQKLPCKVDALHSSLIKLVSAAKFHSIAVSA-----HGE 207

Query: 93  VFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           V++WG G  G+LGH +          + P+ +T   G R  +  I+A  +H+   ++SG 
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQLTSGLGSRR-VKAIAAAKHHTVLATESGE 266

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +FT G    GQLG+    +  +P +VSS  ++ +  +A   +H+ V+       +V+ +G
Sbjct: 267 VFTWGSNREGQLGYT-VDTQPTPRRVSSLKSRII-AVAAANKHTAVV---SDSGEVFTWG 321

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
             K GQLG       S   P+V   L      G++A    +  L A+G +YTWG    + 
Sbjct: 322 CNKEGQLGYGTSNSASNYTPRVVEYLKGKTFKGVAAAKYHTIVLGADGEVYTWGHRLVTP 381

Query: 267 SDVNCPQSLPSS------------LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
             V   ++L  S            L  +  A G  H L LT DG +       + + SDP
Sbjct: 382 RRVVIARNLKKSGNSPLKFHRMERLHVASIAAGMVHSLALTDDGALF------YWVSSDP 435

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           +         +  +++ +L G KV+ I+AG   +AVVT 
Sbjct: 436 D---------LRCQQLYSLCGKKVVSISAGKYWNAVVTA 465



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 95/230 (41%), Gaps = 52/230 (22%)

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D +  +V+ +GSG   QLG     ++   LP     LH   I  +SA    S A+SA G 
Sbjct: 150 DSVTTEVFSWGSGANYQLGTGNAHLQK--LPCKVDALHSSLIKLVSAAKFHSIAVSAHGE 207

Query: 256 LYTWGRG------------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEV 300
           +YTWG G             +  + V  P+ L S L   +    A   +H ++ T  GEV
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQLTSGLGSRRVKAIAAAKHHTVLATESGEV 267

Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRL 360
              G +  G L        T+P      +VS+L   ++I +AA  +H+AVV+        
Sbjct: 268 FTWGSNREGQLG---YTVDTQPTP---RRVSSLKS-RIIAVAAANKHTAVVS-------- 312

Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVV 408
                             ++  + TWG  + GQLG G  N+     P+VV
Sbjct: 313 ------------------DSGEVFTWGCNKEGQLGYGTSNSASNYTPRVV 344



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 32/232 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG+  +GQLG      +  P    +SSL S +  +A    H   ++       G+V
Sbjct: 266 EVFTWGSNREGQLG---YTVDTQPTPRRVSSLKSRIIAVAAANKHTAVVSD-----SGEV 317

Query: 94  FSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           F+WG    GQLG+G    A    P+ V +  G   T   ++A   H+  +   G ++T G
Sbjct: 318 FTWGCNKEGQLGYGTSNSASNYTPRVVEYLKGK--TFKGVAAAKYHTIVLGADGEVYTWG 375

Query: 152 DGTFGQ----LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
                     +     +S +SP+K       +V  IA GM HSL L  D  G   Y   S
Sbjct: 376 HRLVTPRRVVIARNLKKSGNSPLKFHRMERLHVASIAAGMVHSLALTDD--GALFYWVSS 433

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
               +              Q    L   ++V ISA    +A ++A G +Y W
Sbjct: 434 DPDLRC-------------QQLYSLCGKKVVSISAGKYWNAVVTALGDVYMW 472


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 95/190 (50%), Gaps = 12/190 (6%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG    GQLG G     + P  +N      +  LA G +H L LT PS    G VF WG
Sbjct: 190 AWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLT-PS----GTVFGWG 244

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
           +   GQ+G  E  D LYP  V      +  +  ++ G + S  V+ +G LFT G GT+GQ
Sbjct: 245 KNMFGQIGQNEQRDILYPSLVKLLRTQK--VIRLACGEDFSVAVTATGGLFTFGAGTYGQ 302

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG-VS 216
           LGHG+  S   P +V   +   V  +ACG  H+L + +    N++Y FG    GQLG ++
Sbjct: 303 LGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE----NKLYAFGLNTSGQLGLLN 358

Query: 217 KDRIRSVSLP 226
                S+ LP
Sbjct: 359 VKHTTSIPLP 368



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 151/366 (41%), Gaps = 68/366 (18%)

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           G  S GQLG G + +    + +T  +  +    I  I+ G +HS  + D G +F+CG+  
Sbjct: 22  GNTSDGQLGLGGIAEE-NVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNND 80

Query: 155 FGQLGHGDYRSHSSPVK--------VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           F QLGH   +   +  +          SFV  +V  +ACG  H + L  D     ++ +G
Sbjct: 81  FYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTND---GHLFSWG 137

Query: 207 SGKRGQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG---- 260
           S   GQLGV + + +     P++   ++   IV I+   + S AL S +G L+ WG    
Sbjct: 138 SNVYGQLGVERMNVVAKARYPRIQ-EINLANIVQIACGSNHSLALESTDGVLHAWGLNDH 196

Query: 261 --------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                     F   + VN    +P      Q A G +H LVLT  G V   G +  G + 
Sbjct: 197 GQLGIGTRESFIGPTTVNKLMGIP----ICQLAAGASHSLVLTPSGTVFGWGKNMFGQIG 252

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             E+     P  V L +       KVI++A G + S  VT                    
Sbjct: 253 QNEQRDILYPSLVKLLRTQ-----KVIRLACGEDFSVAVTA------------------- 288

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                     + T+G G +GQLG GN   ++ PK V    E       L+V CG   T A
Sbjct: 289 -------TGGLFTFGAGTYGQLGHGNQNSELFPKQVM---ELMG-SVVLDVACGRCHTLA 337

Query: 433 ISRHCL 438
           I+ + L
Sbjct: 338 ITENKL 343



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 93/195 (47%), Gaps = 17/195 (8%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM---VDALYPKPVTFFDGHRYTI 128
           +ACG AH +ALT+      G +FSWG    GQLG   M     A YP+     + +   I
Sbjct: 117 VACGDAHCVALTN-----DGHLFSWGSNVYGQLGVERMNVVAKARYPR---IQEINLANI 168

Query: 129 THISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
             I+ G NHS    S  G L   G    GQLG G   S   P  V+  +   + Q+A G 
Sbjct: 169 VQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGA 228

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSLVL        V+G+G    GQ+G  ++  R +  P +   L   +++ ++   D S
Sbjct: 229 SHSLVLTP---SGTVFGWGKNMFGQIG--QNEQRDILYPSLVKLLRTQKVIRLACGEDFS 283

Query: 248 AALSAEGHLYTWGRG 262
            A++A G L+T+G G
Sbjct: 284 VAVTATGGLFTFGAG 298



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 138/336 (41%), Gaps = 41/336 (12%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGGKVFSW 96
           G  +DGQLG G + +E    L  + S  +   +  +ACG  H + L        G VFS 
Sbjct: 22  GNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLD-----DGSVFSC 76

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYT----------ITHISAGWNHSGFVSDSGC 146
           G     QLGH    D +  KP  + + H Y           +  ++ G  H   +++ G 
Sbjct: 77  GNNDFYQLGH----DGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGH 132

Query: 147 LFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           LF+ G   +GQLG    +  + +   ++      N+ QIACG  HSL L  +     ++ 
Sbjct: 133 LFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLAL--ESTDGVLHA 190

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           +G    GQLG+      S   P     L  I I  ++A    S  L+  G ++ WG+   
Sbjct: 191 WGLNDHGQLGIGTR--ESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMF 248

Query: 262 ---GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
              G N   D+  P    L  +    + A G +  + +T  G +   G   +G L    +
Sbjct: 249 GQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQ 308

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            S   P     ++V  L G  V+ +A G  H+  +T
Sbjct: 309 NSELFP-----KQVMELMGSVVLDVACGRCHTLAIT 339



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 11/147 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQ+G     D L P L+ L     V  LACG    +A+T+      G +F+
Sbjct: 240 VFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTAT-----GGLFT 294

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +G G+ GQLGHG     L+PK V    G    +  ++ G  H+  ++++  L+  G  T 
Sbjct: 295 FGAGTYGQLGHGNQNSELFPKQVMELMGS--VVLDVACGRCHTLAITENK-LYAFGLNTS 351

Query: 156 GQLGHGDYRSHSS---PVKVSSFVNKN 179
           GQLG  + +  +S   P+ +     KN
Sbjct: 352 GQLGLLNVKHTTSIPLPIPIEKQPRKN 378



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 101/275 (36%), Gaps = 76/275 (27%)

Query: 140 FVSDSGCLFTCGDGTFGQLGHG-----DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
            +  S  L  CG+ + GQLG G     + RS +      +F+   + QIACG  HS++LL
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLK--IRQIACGRHHSVMLL 68

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            D     V+  G+    QLG                  HD    GI     R   L    
Sbjct: 69  DD---GSVFSCGNNDFYQLG------------------HD----GIK----RKPNLYENL 99

Query: 255 HLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
           H Y           ++  QS    +     A G  H + LT DG +   G + +G L   
Sbjct: 100 HWY-----------IDVKQSF-VGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLG-V 146

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
           ER++          ++  ++   ++QIA G+ HS  +                       
Sbjct: 147 ERMNVVA--KARYPRIQEINLANIVQIACGSNHSLALE---------------------- 182

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
              + +  +  WG  +HGQLG+G     I P  VN
Sbjct: 183 ---STDGVLHAWGLNDHGQLGIGTRESFIGPTTVN 214


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT  +      
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTENA------ 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 62/243 (25%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT        ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTIGK----PVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGVSKDRIRSV 223
                                   C  N          +Y FG G+ G+LG+  +   + 
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 224 SLP 226
            +P
Sbjct: 338 FIP 340


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 42/310 (13%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G    G 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
           LG G++   + P+ +    G +  I  +S G   H    +  G +FT G   + QLG+G 
Sbjct: 78  LGLGDVQSTIEPRRLDSLSGKK--IASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135

Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                 P ++S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G S   + 
Sbjct: 136 TNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVN 191

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
                +VT  L +  +V I+       A+   G +Y WG         G +      C  
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251

Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
           +    +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK    
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEK---- 307

Query: 334 DGVKVIQIAA 343
              ++I+IAA
Sbjct: 308 --DRIIEIAA 315



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 20/196 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V++WG    GQ+G+G   ++  P+ +     + V + +ACG    +A+     V  G+V
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV-----VDTGEV 226

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WG   +GQLG G   +   P  V    G R  +  ++ G+ H+  ++D G ++  G  
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR--VQRVACGYAHTLVLTDEGQVYAWGAN 284

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++GQLG G+  + S P  V+   ++ +   AC   H+        G  VY +G   RGQ 
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQ--GGHVYMWGQC-RGQ- 340

Query: 214 GVSKDRIRSVSLPQVT 229
                   SV LP +T
Sbjct: 341 --------SVILPHLT 348



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 43/273 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATT--EGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V   Q++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST +   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +   +  WG   +GQLG GN  +Q +P  V +
Sbjct: 274 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPVTM 305


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 114/228 (50%), Gaps = 11/228 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG     QLG G  +  L P Q+    S   V  +ACG  H L LTS      G+V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSD-----GEV 173

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG  +SGQ+G G  V+   P+ VT    ++  +T I+ G      V D+G ++  G  
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGYN 232

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQL
Sbjct: 233 GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQL 289

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G      +S   P VT+    I  +    +   SAA +  GH+Y WG+
Sbjct: 290 GTGNKSNQSYPTP-VTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 61  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSG-PHIVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P ++S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G S   +      +VT  L +  +V I+       A+   G +Y WG     
Sbjct: 177 GYNNSGQVG-SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 296 NQSYPTPVTMEK------DRIIEIAA 315



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 20/196 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
           +V++WG    GQ+G+G   ++  P+ +     + V + +ACG    +A+     V  G+V
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAV-----VDTGEV 226

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WG   +GQLG G   +   P  V    G R  +  ++ G+ H+  ++D G ++  G  
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR--VQRVACGYAHTLVLTDEGQVYAWGAN 284

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++GQLG G+  + S P  V+   ++ +   AC   H+        G  VY +G   RGQ 
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQ--GGHVYMWGQ-CRGQ- 340

Query: 214 GVSKDRIRSVSLPQVT 229
                   SV LP +T
Sbjct: 341 --------SVILPHLT 348



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 43/273 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATT--EGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V   Q++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-QISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST +   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +   +  WG   +GQLG GN  +Q +P  V +
Sbjct: 274 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPVTM 305


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 160/332 (48%), Gaps = 26/332 (7%)

Query: 35  KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V S G  + GQLG  G    EL   +  L +L  V +++CG  H LA+        G+V
Sbjct: 43  RVLSCGDNSRGQLGRRGAQRGELPEPIQALETLI-VDLVSCGKEHSLAVCH-----KGRV 96

Query: 94  FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G 
Sbjct: 97  FAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFAL---SLCGTSFGWGSNSAG 211

Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QL +S   + + S   ++IG L ++ +V IS   + +A L+ +G ++T+G       G++
Sbjct: 212 QLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYS 271

Query: 265 STSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSST 320
            T +   PQ +       SQ   G  H L      G+V+    G S     + PE ++  
Sbjct: 272 PTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTEN 331

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             +S  L    +L  V+V  I AG   + V T
Sbjct: 332 FDIS-CLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 56/315 (17%)

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           ++G  HS  +  +  + +CGD + GQLG    +    P  + +     V  ++CG  HSL
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S ALS
Sbjct: 89  AV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHSLALS 144

Query: 252 AEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEV 300
            +  +++WG+  NS   +   +  PS  S            +Q A G  H   L+  G  
Sbjct: 145 KDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTS 202

Query: 301 LMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
              G +  G L+   R     S +PLS+       L  + V+ I+ G EH+AV+T     
Sbjct: 203 FGWGSNSAGQLALSGRNVPAQSNKPLSIG-----ALKNLGVVYISCGDEHTAVLT----- 252

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
                                ++  + T+G    GQLG   T ++  P++V   D   + 
Sbjct: 253 ---------------------QDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVS- 290

Query: 418 DTQLEVFCGSGFTYA 432
               ++ CGS  T A
Sbjct: 291 ----QIDCGSYHTLA 301


>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 171/417 (41%), Gaps = 62/417 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG    GQLG G   D  +P  ++L   ++V+ +A G  H LALTS      G V 
Sbjct: 57  TVLAWGDNLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTS-----TGTVL 111

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGR   GQL  G+  +     PVT       T+T I+AG +HS  ++ +G     G   
Sbjct: 112 AWGRNRFGQL--GDETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAITSTGSALAWGRNF 169

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G     + PV V+      V  IA G  HSL +           +G    GQLG
Sbjct: 170 SGQLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTS---AGTALAWGRNFAGQLG 226

Query: 215 VSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR--------GFNS 265
              D   + S   VT+ +     +  I+A    S A+++ G    WGR        G  +
Sbjct: 227 ---DGTTNDSTTPVTVSVAPGTTVTDIAAGRVHSLAITSAGTALGWGRNGSGQLGDGTTN 283

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            S      S P+   F+  A G +H L +T  G  L  G + +G L D    SS   ++V
Sbjct: 284 DSTTPTTVSPPTGTVFTTVAAGEDHSLAVTSAGTALAAGDNLYGQLGDGTNTSSNTFVTV 343

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
           +L   + +              +A+  G+FH                 + V A   A+  
Sbjct: 344 SLPPSTTI--------------TAIAVGRFH----------------NLGVTATGAALA- 372

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 442
           WG    GQLG G T ++  P+ V+L          +      GF ++++    P+ T
Sbjct: 373 WGINIDGQLGDGTTTNRNTPQAVDL---------PVSTTVAGGFGHSLALAAPPTST 420


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 174/398 (43%), Gaps = 63/398 (15%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT-----SPSSVI 89
            ++WSWG   DG LG G   D   P L +L+ L        GG+ V++++     S S  I
Sbjct: 1448 RIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPL--------GGSTVVSISTGSGASRSQAI 1499

Query: 90   G--GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
               G++++WG   +G LG G  +D   P  V         +T ++AG  H+  + D   L
Sbjct: 1500 DDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHNLVLDDQSRL 1559

Query: 148  FTCGDGTFGQLGHGDYRSHSSP----VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
            +  G    GQLG G   + + P    V +       V  +  G  HS++L  D LG +++
Sbjct: 1560 WAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIIL--DDLG-RLW 1616

Query: 204  GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
             +G  K G+LG      ++  +    + L+  +++ +SA    + AL  +G L+ WG   
Sbjct: 1617 VWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLND 1676

Query: 262  ----GFNSTSDVNCP-----QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                G  ST+D + P      SL      + +A GWN V  L   G +   G +  G+L 
Sbjct: 1677 SGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTV-ALDELGRLWAWGPNESGLLG 1735

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
            D   ++  RP+ V L   + L+G KV+ ++AG+                          F
Sbjct: 1736 DGTTINQHRPVQVDL---TPLNGRKVVAVSAGS--------------------------F 1766

Query: 373  FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
            +  V+ +   +  WG   +GQLG G    ++ P  V++
Sbjct: 1767 YFFVVDDRGELWAWGSNSYGQLGDGTKTRRLKPVRVDM 1804



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 7/149 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKV 93
            +W+WG    G+LG G   D   P  ++L+SL    V  ++ GG + +AL        G++
Sbjct: 1669 LWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDEL-----GRL 1723

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG   SG LG G  ++   P  V     +   +  +SAG  +   V D G L+  G  
Sbjct: 1724 WAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSN 1783

Query: 154  TFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
            ++GQLG G       PV+V      N  +
Sbjct: 1784 SYGQLGDGTKTRRLKPVRVDMSAMNNTSK 1812



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 46/276 (16%)

Query: 176  VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLH 233
            V  + +++A G  HSL+L      ++++ +G  + G LG   ++DR R V      +G  
Sbjct: 1426 VTGDKNRMAAGSLHSLILDNK---DRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGS 1482

Query: 234  DIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCP-----QSLPSSLSFS 282
             +  +   +   RS A+  +G L+ WG  F       +  D N P      SL SS   +
Sbjct: 1483 TVVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSS-KVT 1541

Query: 283  QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
              A G  H LVL     +   G +  G L D  R +   PL + ++ +  L G  V  + 
Sbjct: 1542 AVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVD-LEPLAGSTVTGVW 1600

Query: 343  AGAEHSAV--------VTGKFHWVRLFIISYTPFFPPFFINVIAEN-RAIMT-------- 385
            AG  HS +        V GK  +  L   + T    P  ++++  N R +M         
Sbjct: 1601 AGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHT 1660

Query: 386  ---------WGWG--EHGQLGLGNTCDQIHPKVVNL 410
                     W WG  + G+LG G+T D+  P  V+L
Sbjct: 1661 VALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDL 1696


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +IS G   S  V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNISCGQMCSMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    Q+Y +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 336



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 136/316 (43%), Gaps = 44/316 (13%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G   SG 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
           LG G++   + P+ +    G +  I  +S G   H    +  G +FT G   + QLG+G 
Sbjct: 78  LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135

Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                 P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G      +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 192

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
            +   +VT  L +  ++ IS     S A+   G +Y WG         G +      C  
Sbjct: 193 PIP-RRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251

Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
           +    +   + A G+ H LVLT +G++   G + +G L    + + + P  V +EK    
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 307

Query: 334 DGVKVIQIAAGAEHSA 349
              ++I+IAA   HSA
Sbjct: 308 --DRIIEIAAC--HSA 319


>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6 [Sarcophilus harrisii]
          Length = 1032

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 154/340 (45%), Gaps = 36/340 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWS G  + GQLG   +     P  +       V  ++CG  H LA+        G+++S
Sbjct: 58  VWSCGNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICK-----TGRIYS 112

Query: 96  WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG GS GQLG  E+ D    PK +      R  I  +S G  HS  ++  G +F+ GD  
Sbjct: 113 WGSGSRGQLGIKEVKDQCSIPKNIAALS--RDKIIQVSCGHYHSIALTQDGKVFSWGDND 170

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V+S     + Q+A G  HS  L    L    YG+G  K GQL
Sbjct: 171 HGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFAL---SLSGTSYGWGRNKEGQL 227

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIV------------GISANGDRSAALSAEGHLYTWGR 261
            +S      VS+       H+ E +            G+    +RS  + A+G + T+G 
Sbjct: 228 ALSGKNASVVSINYCI--WHEAEALTCKRSNSIKEFQGLKELLNRSRQI-ADGKVLTFGS 284

Query: 262 ------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT-GDGEVLMLG-GSHHGMLSD 313
                 G    +    PQ + S+  FSQ A G +H L      G+VL  G GS   + + 
Sbjct: 285 NNSGQLGHGLITKPRGPQIVESAELFSQIACGSHHTLAYACTSGQVLSFGCGSQRHLTNS 344

Query: 314 PERVSSTRPLSVA-LEKVSNLDGVKVIQIAAGAEHSAVVT 352
            ++ S  +  +++ L   ++  GV+V  I AGA  + V T
Sbjct: 345 LQQGSLEQNFNISNLISSNDFTGVRVKDIFAGANSNFVTT 384



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 22/234 (9%)

Query: 37  WSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSS-----VSMLACGGAHVLALTSPSSVI 89
           + WG  +  QLG   GR     SP+++     +S     +   ACG  H L L     + 
Sbjct: 3   YCWGDNSFRQLGINAGR---RASPRVVRCREGASLGGQQIVQAACGERHSLLL-----LA 54

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
            G V+S G  S GQLG   +  +  P P+   +     +  +S G  HS  +  +G +++
Sbjct: 55  DGTVWSCGNNSYGQLGRKNIKKSKRPAPIQALETQ--VVVSVSCGKEHSLAICKTGRIYS 112

Query: 150 CGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            G G+ GQLG  + +   S P  +++     + Q++CG  HS+ L +D    +V+ +G  
Sbjct: 113 WGSGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQD---GKVFSWGDN 169

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
             GQLG+  +   S + PQ    L  I +  ++A G  S ALS  G  Y WGR 
Sbjct: 170 DHGQLGLGTN-FPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRN 222



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 19/232 (8%)

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY---TITHISAGWNHSGFVSDSGCLFTC 150
           + WG  S  QLG      A  P+ V   +G       I   + G  HS  +   G +++C
Sbjct: 3   YCWGDNSFRQLGINAGRRA-SPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSC 61

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G+ ++GQLG  + +    P  + +   + V  ++CG  HSL +   C   ++Y +GSG R
Sbjct: 62  GNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAI---CKTGRIYSWGSGSR 118

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
           GQLG+ K+     S+P+    L   +I+ +S     S AL+ +G +++WG         G
Sbjct: 119 GQLGI-KEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLG 177

Query: 263 FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            N  S  + PQ + S   +  +Q A G +H   L+  G     G +  G L+
Sbjct: 178 TNFPSQAS-PQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRNKEGQLA 228



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 64/161 (39%), Gaps = 39/161 (24%)

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
           QAA G  H L+L  DG V   G + +G L       S RP  +       L+   V+ ++
Sbjct: 41  QAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPAPIQA-----LETQVVVSVS 95

Query: 343 AGAEHSAVV--TGKFH-W-------VRLFIISYTPFFPPFFINVIAENR----------- 381
            G EHS  +  TG+ + W       + +  +      P    N+ A +R           
Sbjct: 96  CGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPK---NIAALSRDKIIQVSCGHY 152

Query: 382 ---------AIMTWGWGEHGQLGLG-NTCDQIHPKVVNLGD 412
                     + +WG  +HGQLGLG N   Q  P+ VN  D
Sbjct: 153 HSIALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSLD 193


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT  +      
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTENA------ 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 62/243 (25%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT        ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTIGK----PVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGVSKDRIRSV 223
                                   C  N          +Y FG G+ G+LG+  +   + 
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNH 337

Query: 224 SLP 226
            +P
Sbjct: 338 FIP 340


>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
          Length = 932

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 39  QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 93

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 94  FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 151

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 152 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 209

Query: 214 G 214
           G
Sbjct: 210 G 210



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 20/223 (8%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
           P+L+   +  ++  ++CG  H LAL +      G+ F+WG+ S GQLG G E      P+
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFFTWGKNSHGQLGLGKEFPSQASPQ 64

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V   +G    +  ++AG  HS  +S SG +F  G    GQLG  D     SP  V    
Sbjct: 65  RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR 122

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            + V  I+CG  H+ VL K      V+ FG+G  GQLG   D +     P+  + L   E
Sbjct: 123 TQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQLG--HDSMNDEVNPRRVLELMGSE 177

Query: 237 IVGISANGDRSAA-LSAEGHLYTWG------RGFNSTSDVNCP 272
           +  I+     + A + + G +Y +G       G   T +V CP
Sbjct: 178 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 93  VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 148 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 206 RGQLGTG----HTCNVKCPSPVK 224



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 97/253 (38%), Gaps = 42/253 (16%)

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S +
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQA 61

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLP 276
            PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D   P    L 
Sbjct: 62  SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL 121

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
            +      + G  H  VLT  G V   G    G L          P      +V  L G 
Sbjct: 122 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGS 176

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +V QIA G +H+              +++ P            +  I  +G G  GQLG 
Sbjct: 177 EVTQIACGRQHT--------------LAFVP-----------SSGLIYAFGCGARGQLGT 211

Query: 397 GNTCDQIHPKVVN 409
           G+TC+   P  V 
Sbjct: 212 GHTCNVKCPSPVK 224


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G  + GQLG  R      P+ +   +   V +++CG  H +A+        GKVF
Sbjct: 42  RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCH-----KGKVF 96

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  + +  P  +    G +  I  +S G  HS  +S+ G +F+ G  
Sbjct: 97  AWGAGSEGQLGIGEFKEISFMPTKIKALAGIK--IIQVSCGHYHSLALSEDGHVFSWGRN 154

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G + RS + P KV S     + Q+A G  HS  L    L    +G+GS + GQ
Sbjct: 155 SEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---SLTGTSFGWGSNRSGQ 211

Query: 213 LGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           L +S ++++  +  P     L ++ ++ IS   + +A L+ EG ++T+G
Sbjct: 212 LALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 260



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 25/235 (10%)

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           ++G +HS  +  +  +++CGD ++GQLG    +S   P  + +  + +V  ++CG  HS+
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAAL 250
            +   C   +V+ +G+G  GQLG+ +   + +S +P     L  I+I+ +S     S AL
Sbjct: 88  AV---CHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHYHSLAL 142

Query: 251 SAEGHLYTWGR--------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEV 300
           S +GH+++WGR        G NS S    PQ + S   +  +Q A G  H   L+  G  
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 201

Query: 301 LMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
              G +  G L+   +  +    +P S+       L  + VI I+ G EH+AV+T
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIG-----ALKNLSVIYISCGYEHTAVLT 251



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 79/229 (34%), Gaps = 80/229 (34%)

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
           Q A G  HSL+L  +   ++VY  G    GQLG  +D+  S   P+    L+D+ +  +S
Sbjct: 26  QAASGEHHSLLLFSN---HRVYSCGDNSWGQLGQRRDQ--STERPEPIQALNDLHVDLVS 80

Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
                                                        G  H + +   G+V 
Sbjct: 81  C--------------------------------------------GKEHSVAVCHKGKVF 96

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G    G L     +   + +S    K+  L G+K+IQ++ G  HS             
Sbjct: 97  AWGAGSEGQLG----IGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLA----------- 141

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVN 409
                          ++E+  + +WG    GQLGLG N+  Q  P+ V 
Sbjct: 142 ---------------LSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK 175


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 62/232 (26%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT        ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGV 215
                                   C  N          +Y FG G+ G+LG+
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 92/182 (50%), Gaps = 13/182 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG  ++GQ+G   + +   PQ + +     VS ++CG  H   +T+      G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +G   +G+LG    +   +  P    +     I  ++ G  H+  ++++  ++T G G 
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           FGQLG G +   +S P  + +  ++ +  I+CG  H+ ++    L   +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327

Query: 214 GV 215
           G+
Sbjct: 328 GL 329


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 159/368 (43%), Gaps = 70/368 (19%)

Query: 88  VIGGKVFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
           V    + +WG G  GQLG G         +V+AL P          Y++  + +G  +S 
Sbjct: 2   VTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEP----------YSVRSVVSGSRNSL 51

Query: 140 FVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
            + D G +FT G    G LGH  + ++ + P +V +  N  + Q A G  H L +     
Sbjct: 52  AICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ-- 109

Query: 199 GNQVYGFGSGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
             + Y +G  + GQ G    KD +     R + +P+       + +  ++A G  S  L+
Sbjct: 110 -GRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVAAGGTHSVVLT 166

Query: 252 AEGHLYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            EGH++TWG+ +       ++ P  +    +    A+G  H L L  DG +L  G + +G
Sbjct: 167 REGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYG 226

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L   +   ++ P+ V       LD + ++ IAAG  HS  +T K               
Sbjct: 227 QLGTGDTQPTSHPVPV-----QGLDDLTLVDIAAGGWHSTALTDKGE------------- 268

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                        +  WG GEHG+LGLG+     ++ P+ VNL  E    +  ++V CG 
Sbjct: 269 -------------VYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAE----EDIIQVSCGG 311

Query: 428 GFTYAISR 435
             + A++R
Sbjct: 312 THSVALTR 319



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 139/310 (44%), Gaps = 34/310 (10%)

Query: 36  VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++WG    G LG       E  P  +   +   ++  A GG H LA+        G+ +
Sbjct: 59  MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ-----GRAY 113

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTF------FDGHRYTITHISAGWNHSGFVSDSGCLF 148
           +WG    GQ G   + D +  +PV            + T+  ++AG  HS  ++  G ++
Sbjct: 114 AWGGNEYGQCGEEPLKDEMG-RPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVW 172

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           T G         GD +  S PV+V     +NV  IA G  H+L L +D    ++  +G+ 
Sbjct: 173 TWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALEED---GRLLAWGNN 223

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           + GQLG    +  S  +P    GL D+ +V I+A G  S AL+ +G +Y WGRG      
Sbjct: 224 EYGQLGTGDTQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281

Query: 264 ---NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              N  S    PQ  +L +     Q + G  H + LT DG +   G   HG L    +V+
Sbjct: 282 LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341

Query: 319 STRPLSVALE 328
           + +PL + ++
Sbjct: 342 TGQPLELPIK 351



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 23/235 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-------LSSLSSVSMLACGGAHVLALTSPSS 87
           + ++WG    GQ G   L DE+   +          +   +V  +A GG H + LT    
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE-- 168

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              G V++WG+        G++     P  V   +  R     I+ G  H+  + + G L
Sbjct: 169 ---GHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRL 217

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
              G+  +GQLG GD +  S PV V    +  +  IA G  HS  L       +VYG+G 
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDK---GEVYGWGR 274

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G+ G+LG+  +   S  +PQ    L + +I+ +S  G  S AL+ +G ++++GRG
Sbjct: 275 GEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRG 329



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 27/180 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ +WG    GQLGTG       P  +  L  L+ V  +A GG H  ALT       G+V
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVD-IAAGGWHSTALTDK-----GEV 269

Query: 94  FSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           + WGRG  G+LG G+      + P+ V         I  +S G  HS  ++  G +F+ G
Sbjct: 270 YGWGRGEHGRLGLGDNDKSSKMVPQKVNLL--AEEDIIQVSCGGTHSVALTRDGRIFSFG 327

Query: 152 DGTFGQLGHGDYRSHSSPVKVS--------SFVNKNVHQ--------IACGMRHSLVLLK 195
            G  G+LG+G   +   P+++         SF + +  +        IACG RH+L +++
Sbjct: 328 RGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 387


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 19/265 (7%)

Query: 55  ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY 114
           E+  + L  + L   S   C   +  A+  P +V    V SWGRG  GQLGHG+  D L 
Sbjct: 36  EMLARFLISTPLLPESWRLCSKVNASAVNFPGNV----VCSWGRGEDGQLGHGDTDDRLL 91

Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVS 173
           P  ++ FDG    I  ++ G +++   S SG  +++ G G FG+LGHGD      P  + 
Sbjct: 92  PTKLSAFDGQ--DIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIR 149

Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
           +     + QI+CG  H L +  +   N+V  +G  + G+LG+   +   V  PQ  +   
Sbjct: 150 ALQGLRIKQISCGDCHCLAVTME---NKVLSWGRNQNGELGLGTTKDSHV--PQKILAFE 204

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLP-SSLSFSQAAL 286
            I I  ++A  + S A++ +G LY WG       G   T+D   P+ +          + 
Sbjct: 205 GIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSC 264

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGML 311
           GW H + ++  G +   G S +G L
Sbjct: 265 GWRHTISISSSGGLYTHGWSKYGQL 289



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 110/227 (48%), Gaps = 16/227 (7%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V SWG G DGQLG G   D L P  L+      +  + CG  + +A     S  G  V+S
Sbjct: 70  VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVA----RSKSGKDVYS 125

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG+  D   P P+    G R  I  IS G  H   V+    + + G    
Sbjct: 126 WGWGDFGRLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQN 183

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G  +    P K+ +F    +  +A G  HS+ + +D     +YG+G G+ G LG+
Sbjct: 184 GELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED---GDLYGWGWGRYGNLGL 240

Query: 216 --SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
             + DR+    +P+  + +   +IV +S     + ++S+ G LYT G
Sbjct: 241 GDTNDRL----IPE-KVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 282



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV SWG   +G+LG G   D   PQ +       + M+A G  H +A+T       G ++
Sbjct: 174 KVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED-----GDLY 228

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V   DG +  I  +S GW H+  +S SG L+T G   
Sbjct: 229 GWGWGRYGNLGLGDTNDRLIPEKVNI-DGDK--IVMVSCGWRHTISISSSGGLYTHGWSK 285

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
           +GQLGHGD+     P KV +  +K + Q+
Sbjct: 286 YGQLGHGDFEDCLVPRKVQALSDKLISQV 314



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 51/247 (20%)

Query: 199 GNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH- 255
           GN V  +G G+ GQLG   + DR+    LP         +IV ++   D + A S  G  
Sbjct: 67  GNVVCSWGRGEDGQLGHGDTDDRL----LPTKLSAFDGQDIVSVTCGADYTVARSKSGKD 122

Query: 256 LYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           +Y+WG       G    SD+  P  + +   L   Q + G  H L +T + +VL  G + 
Sbjct: 123 VYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 182

Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
           +G L       S  P     +K+   +G+++  +AAGAEHS  +T               
Sbjct: 183 NGELGLGTTKDSHVP-----QKILAFEGIRIKMVAAGAEHSVAIT--------------- 222

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
                      E+  +  WGWG +G LGLG+T D++ P+ VN+     + D  + V CG 
Sbjct: 223 -----------EDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI-----DGDKIVMVSCGW 266

Query: 428 GFTYAIS 434
             T +IS
Sbjct: 267 RHTISIS 273


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 62/232 (26%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT        ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGV 215
                                   C  N          +Y FG G+ G+LG+
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 11/194 (5%)

Query: 23   KIEEEEEEQQVV-KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVL 80
            K++ +E+++ +  ++++WG  + GQLG GR+     +PQ++   +   +  ++ G AH +
Sbjct: 901  KLKLDEKKKFLCGELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSM 960

Query: 81   ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
            AL+     + G V+SWG+   GQLG G       P  +   D  +  +  ++ G +H+  
Sbjct: 961  ALS-----MTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQK--VDFLACGGSHTAL 1013

Query: 141  VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            ++  G +FT G G +GQLGH   R    P  V+  +   V QIACG  H+L  + + LG 
Sbjct: 1014 LTQDGLVFTFGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSE-LG- 1071

Query: 201  QVYGFGSGKRGQLG 214
            +V+ FGSGK GQLG
Sbjct: 1072 KVFAFGSGKNGQLG 1085



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 13/206 (6%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD-ALYPK 116
           P+ +       V +++CG  H LA+        G+VF+WG GS GQLG GE  + +  P+
Sbjct: 88  PEQIQAFETLRVDLVSCGKEHSLAVCH-----KGRVFAWGAGSEGQLGIGEFKERSFTPQ 142

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSF 175
            +    G +  I  +S G+ HS  +S+ G +F+ G  + GQLG G +  S +SP +V S 
Sbjct: 143 KIKALAGIK--IIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSL 200

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHD 234
               + Q+A G  HS  L    L    +G+GS   GQL +S  +        +++G L  
Sbjct: 201 EGIPLAQVAAGGAHSFAL---SLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKT 257

Query: 235 IEIVGISANGDRSAALSAEGHLYTWG 260
           + +V IS   + +A L+  G +YT+G
Sbjct: 258 LGVVYISCGSEHTAVLTQNGAVYTFG 283



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 15/190 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WGAG++GQLG G   +   +PQ +   +   +  ++CG  H LAL+       G+V
Sbjct: 117 RVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYHSLALSE-----DGQV 171

Query: 94  FSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FSWG+ S GQLG G+ V +   P+ V   +G    +  ++AG  HS  +S SG  F  G 
Sbjct: 172 FSWGKNSHGQLGLGKEVPSQTSPQRVRSLEG--IPLAQVAAGGAHSFALSLSGTSFGWGS 229

Query: 153 GTFGQLGHGDYRS---HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            + GQL     ++      P+ V +     V  I+CG  H+ VL ++     VY FG+  
Sbjct: 230 NSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQN---GAVYTFGANS 286

Query: 210 RGQLGVSKDR 219
            GQLG S ++
Sbjct: 287 SGQLGHSAEQ 296



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 75/143 (52%), Gaps = 13/143 (9%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V+SWG    GQLG G    + SP LL       V  LACGG+H   LT       G VF+
Sbjct: 968  VYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQ-----DGLVFT 1022

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGDGT 154
            +G G  GQLGH    D L P  VT   G+R  +T I+ G W+   +VS+ G +F  G G 
Sbjct: 1023 FGAGKYGQLGHSSTRDELRPCLVTELLGNR--VTQIACGRWHTLAYVSELGKVFAFGSGK 1080

Query: 155  FGQLGHGDYRSHSSPVKVSSFVN 177
             GQLG+    +H+ P   +S+VN
Sbjct: 1081 NGQLGNCG--THNQP---NSYVN 1098



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 11/190 (5%)

Query: 78   HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
            H L L      + G++F+WG+ S GQLG G +  +  P P          +  ISAG  H
Sbjct: 900  HKLKLDEKKKFLCGELFAWGQNSHGQLGLGRIFPS-SPTPQIVEHLAGVPLVQISAGEAH 958

Query: 138  SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
            S  +S +G +++ G   FGQLG G   S  SP  + +  ++ V  +ACG  H+ +L +D 
Sbjct: 959  SMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDG 1018

Query: 198  LGNQVYGFGSGKRGQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-G 254
            L   V+ FG+GK GQLG S  +D +R    P +   L    +  I+     + A  +E G
Sbjct: 1019 L---VFTFGAGKYGQLGHSSTRDELR----PCLVTELLGNRVTQIACGRWHTLAYVSELG 1071

Query: 255  HLYTWGRGFN 264
             ++ +G G N
Sbjct: 1072 KVFAFGSGKN 1081



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 58/280 (20%)

Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           S P ++ +F    V  ++CG  HSL +   C   +V+ +G+G  GQLG+ + + RS + P
Sbjct: 86  SKPEQIQAFETLRVDLVSCGKEHSLAV---CHKGRVFAWGAGSEGQLGIGEFKERSFT-P 141

Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS------ 280
           Q    L  I+I+ +S     S ALS +G +++WG+  NS   +   + +PS  S      
Sbjct: 142 QKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGK--NSHGQLGLGKEVPSQTSPQRVRS 199

Query: 281 -----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPERVSSTRPLSVALEKVSN 332
                 +Q A G  H   L+  G     G +  G L+       V   +PLSV       
Sbjct: 200 LEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVG-----A 254

Query: 333 LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHG 392
           L  + V+ I+ G+EH+AV+T                          +N A+ T+G    G
Sbjct: 255 LKTLGVVYISCGSEHTAVLT--------------------------QNGAVYTFGANSSG 288

Query: 393 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
           Q  LG++ +Q  P+ V   D   +     ++ CGS  T A
Sbjct: 289 Q--LGHSAEQRGPQCVERIDGLVS-----QIDCGSYHTLA 321



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 39/216 (18%)

Query: 195  KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            K  L  +++ +G    GQLG+ +    S   PQ+   L  + +V ISA    S ALS  G
Sbjct: 908  KKFLCGELFAWGQNSHGQLGLGRI-FPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTG 966

Query: 255  HLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
            ++Y+WG+      G   T   + P  L +  S      A G +H  +LT DG V   G  
Sbjct: 967  NVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAG 1026

Query: 307  HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             +G L         RP       V+ L G +V QIA G  H+                  
Sbjct: 1027 KYGQLGHSSTRDELRPC-----LVTELLGNRVTQIACGRWHT------------------ 1063

Query: 367  PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQ 402
                   +  ++E   +  +G G++GQLG   T +Q
Sbjct: 1064 -------LAYVSELGKVFAFGSGKNGQLGNCGTHNQ 1092


>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
          Length = 938

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 47  QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 101

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 102 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 159

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L L+       +Y FG G +GQL
Sbjct: 160 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 217

Query: 214 G 214
           G
Sbjct: 218 G 218



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 114/240 (47%), Gaps = 21/240 (8%)

Query: 42  GTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGS 100
           G+DGQLG     D ++ P+L+   +  ++  ++CG  H LAL +      G+ F+WG+ S
Sbjct: 1   GSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFFTWGKNS 55

Query: 101 SGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
            GQLG G E      P+ V   +G    +  ++AG  HS  +S SG +F  G    GQLG
Sbjct: 56  HGQLGLGKEFPSQTSPQRVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 113

Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
             D +   SP  V     + V  I+CG  H+ VL K      V+ FG+G  GQLG   D 
Sbjct: 114 LSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQLG--HDS 168

Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRGFN------STSDVNCP 272
           +     P+  + L   E+  I+     + AL  + G +Y +G G         T +V CP
Sbjct: 169 VNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCP 228



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 101 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 155

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  + D + P+ V    G    +T I+ G  H+   V  SG ++  G G 
Sbjct: 156 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 213

Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
            GQLG              G + +HSS +  +   F  + V QI  G   + VL
Sbjct: 214 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 267



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 113/302 (37%), Gaps = 57/302 (18%)

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG  G +   D  S + P  +     + + Q++CG  H L L  D    Q + +G    G
Sbjct: 3   DGQLGLMTTED--SVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHG 57

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG+ K+   S + PQ    L  I +  ++A G  S ALS  G ++ WG       G + 
Sbjct: 58  QLGLGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 116

Query: 266 TSDVN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
             D    C   L  +      + G  H  VLT  G V   G    G L          P 
Sbjct: 117 EKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP- 175

Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAI 383
                +V  L G +V QIA G +H+                         + ++  +  I
Sbjct: 176 ----RRVLELMGSEVTQIACGRQHT-------------------------LALVPSSGLI 206

Query: 384 MTWGWGEHGQLGLGNTCDQIHPKVVN------------LGDEFQNRDTQLEVFCGSGFTY 431
             +G G  GQLG G+TC+   P  V               D F+ R  + ++F G   T+
Sbjct: 207 YAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVK-QIFSGGDQTF 265

Query: 432 AI 433
            +
Sbjct: 266 VL 267



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 98/243 (40%), Gaps = 51/243 (20%)

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
           G  GQLG+      SV++P++   L+   I+ +S       AL+A+G  +TWG+  NS  
Sbjct: 1   GSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHG 57

Query: 268 DVNCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
            +   +  PS  S            +Q A G  H   L+  G V   G ++ G L   + 
Sbjct: 58  QLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 117

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
                P  V L     L   KV+ I+ G EH+AV+T                        
Sbjct: 118 KDRESPCHVKL-----LRTQKVVYISCGEEHTAVLT------------------------ 148

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFT 430
             ++  + T+G G  GQLG  +  D+++P+ V   +G E       R   L +   SG  
Sbjct: 149 --KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLI 206

Query: 431 YAI 433
           YA 
Sbjct: 207 YAF 209


>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
 gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pan paniscus]
 gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Gorilla gorilla gorilla]
 gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
          Length = 932

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 39  QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 93

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 94  FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 151

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 152 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 209

Query: 214 G 214
           G
Sbjct: 210 G 210



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 20/223 (8%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
           P+L+   +  ++  ++CG  H LAL +      G+ F+WG+ S GQLG G E      P+
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFFTWGKNSHGQLGLGKEFPSQASPQ 64

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V   +G    +  ++AG  HS  +S SG +F  G    GQLG  D +   SP  V    
Sbjct: 65  RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            + V  I+CG  H+ VL K      V+ FG+G  GQLG   D +     P+  + L   E
Sbjct: 123 TQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQLG--HDSMNDEVNPRRVLELMGSE 177

Query: 237 IVGISANGDRSAA-LSAEGHLYTWG------RGFNSTSDVNCP 272
           +  I+     + A + + G +Y +G       G   T +V CP
Sbjct: 178 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 93  VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 148 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 206 RGQLGTG----HTCNVKCPSPVK 224



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 97/253 (38%), Gaps = 42/253 (16%)

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S +
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQA 61

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLP 276
            PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D    C   L 
Sbjct: 62  SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 121

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
            +      + G  H  VLT  G V   G    G L          P      +V  L G 
Sbjct: 122 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGS 176

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +V QIA G +H+              +++ P            +  I  +G G  GQLG 
Sbjct: 177 EVTQIACGRQHT--------------LAFVP-----------SSGLIYAFGCGARGQLGT 211

Query: 397 GNTCDQIHPKVVN 409
           G+TC+   P  V 
Sbjct: 212 GHTCNVKCPSPVK 224


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 52/354 (14%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V +WG G  GQLG G M D  +   +     H   +  + AG  +S  + + G LFT G 
Sbjct: 7   VLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFTWGW 66

Query: 153 GTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              G LGH  + ++ S+P +V +  N  + Q A G  H L +       Q Y +G  + G
Sbjct: 67  NQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ---GQAYAWGGNEYG 123

Query: 212 QLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
           Q G   +R         R +++PQ       + +  ++A G  S  L+  GH++TWG+ +
Sbjct: 124 QCGEEPERKEDGSKVLRRDIAIPQRCA--PQLRVRQVAAGGTHSVVLTHNGHVWTWGQPW 181

Query: 264 --NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
                  ++ P  +    +    A+G  H L L  +GEV   G + +G L   +    ++
Sbjct: 182 PPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQ 241

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P+      V  L G+ +  IAAG  HS  +T                           + 
Sbjct: 242 PVP-----VQGLSGLILADIAAGGWHSTALT--------------------------TDA 270

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            +  WG GEHG+LG G   D    K+V         +T  +V CG   T++++R
Sbjct: 271 EVYAWGRGEHGRLGFG---DDKSSKMVPQKVHLLAGETIAQVSCGG--THSVAR 319



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 40/313 (12%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    G LG       E +P  +       +   A GG H LA+        G+ 
Sbjct: 60  QLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ-----GQA 114

Query: 94  FSWGRGSSGQLGH-------GEMV---DALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           ++WG    GQ G        G  V   D   P+        +  +  ++AG  HS  ++ 
Sbjct: 115 YAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCA----PQLRVRQVAAGGTHSVVLTH 170

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +G ++T G         GD +  S+PV+V     +NV  IA G  H+L LL++    +V+
Sbjct: 171 NGHVWTWGQ----PWPPGDIKQISTPVRVQGL--ENVQLIAVGAFHNLALLEE---GEVW 221

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G+ + GQLG    + RS  +P    GL  + +  I+A G  S AL+ +  +Y WGRG 
Sbjct: 222 AWGNNEYGQLGTGDTQPRSQPVP--VQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGE 279

Query: 264 -------NSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                  +  S    PQ   L +  + +Q + G  H +  T DG +   G + HG L   
Sbjct: 280 HGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFSYGRADHGRLGYG 339

Query: 315 ERVSSTRPLSVAL 327
            +V++  P+ V +
Sbjct: 340 RKVTTGHPMEVPI 352



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 157/399 (39%), Gaps = 75/399 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS-----VIG 90
           V +WG+G DGQLG G + D+          + S+  LA  G  V+++ + S         
Sbjct: 7   VLAWGSGEDGQLGVGNMEDK--------DWVCSIQALASHGKRVVSVVAGSRNSLAICED 58

Query: 91  GKVFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           G++F+WG    G LGH  E      P  V   +  +     I  GW H   V D G  + 
Sbjct: 59  GQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAI-GGW-HCLAVDDQGQAYA 116

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFV--------NKNVHQIACGMRHSLVLLKDCLGNQ 201
            G   +GQ G    R       +   +           V Q+A G  HS+VL  +     
Sbjct: 117 WGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHN---GH 173

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           V+ +     GQ     D I+ +S P    GL +++++ + A    + AL  EG ++ WG 
Sbjct: 174 VWTW-----GQPWPPGD-IKQISTPVRVQGLENVQLIAVGAF--HNLALLEEGEVWAWGN 225

Query: 262 ---GFNSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
              G   T D   P+S P      S L  +  A G  H   LT D EV   G   HG L 
Sbjct: 226 NEYGQLGTGDTQ-PRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLG 284

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             +  SS     +  +KV  L G  + Q++ G  HS   T                    
Sbjct: 285 FGDDKSS----KMVPQKVHLLAGETIAQVSCGGTHSVART-------------------- 320

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
                A+ R I ++G  +HG+LG G      HP  V +G
Sbjct: 321 -----ADGR-IFSYGRADHGRLGYGRKVTTGHPMEVPIG 353


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 163/406 (40%), Gaps = 86/406 (21%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG  + G+LG G   D   PQL+   ++++V  +ACG  H  A++     I  ++F
Sbjct: 284 EVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHTCAVS-----ISDELF 338

Query: 95  SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           SWG G  + G LGHG  V    PK +    +G    +  I+ G  HS   + +G LFT G
Sbjct: 339 SWGDGKYNVGLLGHGTDVSHWVPKRINGPLEG--LQVISIACGTWHSALATSNGKLFTFG 396

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DGTFG LGHG+  S + P +V          +ACG+ H+  +++         F SG   
Sbjct: 397 DGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVE-------VTFQSG--- 446

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS-DVN 270
                                        S    R      +G  Y  G G   T     
Sbjct: 447 -----------------------------SNVSSRKLFTWGDGDKYRLGHGNKETYLQPT 477

Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           C  +L    +F Q A G    + LT  G +  +GG+  G L +     S     + +   
Sbjct: 478 CVSTL-IEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLGN-----SLSDGKIPILVQ 531

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
             L G  V +I+ GA H A +T +                            + TWG G 
Sbjct: 532 DALVGEFVEEISCGAHHVAALTSRSE--------------------------LYTWGKGA 565

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V    E   ++    + CGS FT  I  H
Sbjct: 566 NGRLGHGDIDDRKSPTLVEALKERHVKN----ISCGSSFTSCICIH 607



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 140/359 (38%), Gaps = 96/359 (26%)

Query: 91  GKVFSWGR---GSSGQLGHG----EMVDALYPKPV---TFFDGHRYTITHISAGWNHSGF 140
           G V+ WG     +    G+G       D L PKP+      D H+     I++G  H   
Sbjct: 224 GDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQ-----IASGVRHMAL 278

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           V+  G +FT G+ + G+LGHG  +    P  V      NV  +ACG  H+  +    + +
Sbjct: 279 VTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHTCAV---SISD 335

Query: 201 QVYGFGSGKR--GQLGVSKDRIRSVS--LPQVTIG-LHDIEIVGISANGDRSAALSAEGH 255
           +++ +G GK   G LG   D    VS  +P+   G L  ++++ I+     SA  ++ G 
Sbjct: 336 ELFSWGDGKYNVGLLGHGTD----VSHWVPKRINGPLEGLQVISIACGTWHSALATSNGK 391

Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           L+T+                                    GDG   +LG   HG      
Sbjct: 392 LFTF------------------------------------GDGTFGVLG---HG-----N 407

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFIN 375
           R S   P  V L     L G+K I +A G  H+A            I+  T     F   
Sbjct: 408 RESVAYPKEVQL-----LSGLKTITVACGVWHTAA-----------IVEVT-----FQSG 446

Query: 376 VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
               +R + TWG G+  +LG GN    + P  V+   E+       ++ CG   T A++
Sbjct: 447 SNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH----QIACGHTMTIALT 501


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G  + GQLG  R      P+ +   +   V +++CG  H +A+        GKVF
Sbjct: 42  RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCH-----KGKVF 96

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  + +  P  +    G +  I  +S G  HS  +S+ G +F+ G  
Sbjct: 97  AWGAGSEGQLGIGEFKEISFMPTKIKALAGIK--IIQVSCGHYHSLALSEDGHVFSWGRN 154

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G + RS + P KV S     + Q+A G  HS  L    L    +G+GS + GQ
Sbjct: 155 SEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---SLTGTSFGWGSNRSGQ 211

Query: 213 LGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           L +S ++++  +  P     L ++ ++ IS   + +A L+ EG ++T+G
Sbjct: 212 LALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 260



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 23/234 (9%)

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           ++G +HS  +  +  +++CGD ++GQLG    +S   P  + +  + +V  ++CG  HS+
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +   C   +V+ +G+G  GQLG+ + +  S  +P     L  I+I+ +S     S ALS
Sbjct: 88  AV---CHKGKVFAWGAGSEGQLGIGEFKEISF-MPTKIKALAGIKIIQVSCGHYHSLALS 143

Query: 252 AEGHLYTWGR--------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL 301
            +GH+++WGR        G NS S    PQ + S   +  +Q A G  H   L+  G   
Sbjct: 144 EDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSF 202

Query: 302 MLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             G +  G L+   +  +    +P S+       L  + VI I+ G EH+AV+T
Sbjct: 203 GWGSNRSGQLALSGNKVKEQIYKPHSIG-----ALKNLSVIYISCGYEHTAVLT 251



 Score = 38.9 bits (89), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 79/229 (34%), Gaps = 80/229 (34%)

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
           Q A G  HSL+L  +   ++VY  G    GQLG  +D+  S   P+    L+D+ +  +S
Sbjct: 26  QAASGEHHSLLLFSN---HRVYSCGDNSWGQLGQRRDQ--STERPEPIQALNDLHVDLVS 80

Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
                                                        G  H + +   G+V 
Sbjct: 81  C--------------------------------------------GKEHSVAVCHKGKVF 96

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G    G L     +   + +S    K+  L G+K+IQ++ G  HS             
Sbjct: 97  AWGAGSEGQLG----IGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLA----------- 141

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVN 409
                          ++E+  + +WG    GQLGLG N+  Q  P+ V 
Sbjct: 142 ---------------LSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK 175


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 173/401 (43%), Gaps = 70/401 (17%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           P+LLN + +  V  +ACG  H   +T       G+VFSWG  + G+LGH   V    PK 
Sbjct: 206 PRLLNTTHIIDVQSVACGEKHAAIVTK-----QGEVFSWGVDNGGRLGHKVSVSVSDPKI 260

Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSF 175
           +      R  +  I+ G  H+  VS SG L+  G+GT   G  G    RS   P K+   
Sbjct: 261 IESLASTR--VKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP 318

Query: 176 VNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
           ++  ++ +IACG  H+ ++       Q++ +G G  G LG   D + +V+ P+    L  
Sbjct: 319 LDGISILKIACGHWHTAIISS---AGQIFTYGDGTFGVLG-HGDTL-TVARPKQVESLKG 373

Query: 235 IEIVGISANGDRSAAL----------SAEGHLYTWG---RGFNSTSDVN------CPQSL 275
           +    I+     +AA+          +  G L+TWG   RG    +D        C + L
Sbjct: 374 VRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL 433

Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
            +   F+Q +      +VLT  G V  +G   HG L +P     +   S+ L +   L  
Sbjct: 434 -NDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP----LSEDTSICLIE-GPLKT 487

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
             V +I++G+ H AV+T                           N  + TWG G  GQLG
Sbjct: 488 EFVREISSGSSHIAVLTM--------------------------NGKVFTWGKGTEGQLG 521

Query: 396 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           LG+  D+ +P +V   ++ Q       + CG  FT AI  H
Sbjct: 522 LGDYVDRSYPTLVEALEDKQVHS----IACGFNFTMAICLH 558



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 28/313 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG         P+++   + + V  +A G  H  A++     I G+++
Sbjct: 235 EVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVS-----ISGELY 289

Query: 95  SWGRGSS--GQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            WG G+   G  G        +P K     DG   +I  I+ G  H+  +S +G +FT G
Sbjct: 290 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDG--ISILKIACGHWHTAIISSAGQIFTYG 347

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  + + P +V S        IACG  H+  +++       +    +++ 
Sbjct: 348 DGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 407

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
           +G   RG+LG +  +++ V  P     L+D +   +S    ++  L+  G ++T      
Sbjct: 408 WGDADRGKLGHADKKMKLV--PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEH 465

Query: 260 GRGFNSTSDVN--CPQSLPSSLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           GR  N  S+    C    P    F  + + G +H+ VLT +G+V   G    G L   + 
Sbjct: 466 GRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDY 525

Query: 317 VSSTRPLSV-ALE 328
           V  + P  V ALE
Sbjct: 526 VDRSYPTLVEALE 538



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG    G+LG      +L P  +   +    + ++C  A  + LT     I G VF
Sbjct: 404 KLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLT-----ITGVVF 458

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    G+LG+    D      +   +G   T  +  IS+G +H   ++ +G +FT G 
Sbjct: 459 TIGSKEHGRLGNPLSEDT----SICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 514

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           GT GQLG GDY   S P  V +  +K VH IACG   ++ +
Sbjct: 515 GTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 43/283 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQV 202
           +F  G+     L HGD     + V +   +N     +V  +ACG +H+ ++ K     +V
Sbjct: 182 IFVWGEVPGNVLDHGDV--SKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQ---GEV 236

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G    G+LG  K  + SVS P++   L    +  I+     + A+S  G LY WG G
Sbjct: 237 FSWGVDNGGRLG-HKVSV-SVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEG 294

Query: 263 FNST----SDVNCPQSLPSSL-------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +            Q  P  L       S  + A G  H  +++  G++   G    G+L
Sbjct: 295 THCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVL 354

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
              + ++  RP     ++V +L GV+   IA G  H+A +  +   V+    S  P    
Sbjct: 355 GHGDTLTVARP-----KQVESLKGVRAKAIACGPWHTAAIVERMGTVK----SNAP---- 401

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                   +  + TWG  + G+LG  +   ++ P  V   ++F
Sbjct: 402 --------SGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF 436


>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Papio anubis]
          Length = 932

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 39  QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 93

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 94  FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 151

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 152 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 209

Query: 214 G 214
           G
Sbjct: 210 G 210



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 20/223 (8%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
           P+L+   +  ++  ++CG  H LAL +      G+ F+WG+ S GQLG G E      P+
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFFTWGKNSHGQLGLGKEFPSQASPQ 64

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V   +G    +  ++AG  HS  +S SG +F  G    GQLG  D +   SP  V    
Sbjct: 65  RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            + V  I+CG  H+ VL K      V+ FG+G  GQLG   D +     P+  + L   E
Sbjct: 123 TQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQLG--HDSMNDEVNPRRVLELMGSE 177

Query: 237 IVGISANGDRSAA-LSAEGHLYTWGRGFNS------TSDVNCP 272
           +  I+     + A + + G +Y +G G         T +V CP
Sbjct: 178 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 93  VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 148 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 206 RGQLGTG----HTCNVKCPSPVK 224



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 97/253 (38%), Gaps = 42/253 (16%)

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S +
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQA 61

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLP 276
            PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D    C   L 
Sbjct: 62  SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 121

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
            +      + G  H  VLT  G V   G    G L          P      +V  L G 
Sbjct: 122 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGS 176

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +V QIA G +H+              +++ P            +  I  +G G  GQLG 
Sbjct: 177 EVTQIACGRQHT--------------LAFVP-----------SSGLIYAFGCGARGQLGT 211

Query: 397 GNTCDQIHPKVVN 409
           G+TC+   P  V 
Sbjct: 212 GHTCNVKCPSPVK 224


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 175/424 (41%), Gaps = 57/424 (13%)

Query: 28  EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           +EE+   +VWS G  + G+LG G      S + +       +  +  G  H +ALT    
Sbjct: 427 DEEEGDREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALT---- 482

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
            + GKV + G   +GQ G G      +   +     +  +  H   G  H+  V+  G  
Sbjct: 483 -VDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRA 541

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL-KDCLGNQ-VYGF 205
            TCG    GQLGHG+  S S P  V S  N+ V  ++C   H+++   +D  G Q +Y F
Sbjct: 542 ATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTF 601

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQLG +    R V  PQ    + D  +V ++     +  ++A G  + +G+    
Sbjct: 602 GRNDYGQLGHNDSIDRKV--PQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 262 --GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPE 315
             G +S  +   P  + + L   +      G+ H +VL     +   G + +G L     
Sbjct: 660 QLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA 719

Query: 316 RVSSTRPLSVALEK------VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
             SST  L +  ++      +  L+G  +++ A G  H+  V+                 
Sbjct: 720 NASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVS----------------- 762

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 429
                    +N  +  +G   HGQLG G+T ++++P  +   D+F  +   L     +GF
Sbjct: 763 ---------DNGVMYVFGRNNHGQLGTGDTNERVYPFPI---DDFVGKRVAL---VAAGF 807

Query: 430 TYAI 433
            + +
Sbjct: 808 YHTV 811



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 47/321 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +  + G    GQLG G    E  P+++       V +++C   H +            ++
Sbjct: 540 RAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLY 599

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++GR   GQLGH + +D   P+ V    D H   +  ++ G  H+  V+ +G  F  G  
Sbjct: 600 TFGRNDYGQLGHNDSIDRKVPQHVEAMGDQH---VVSVACGQYHTMVVTATGKAFAFGKN 656

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            +GQLG     +   PV+V + + K+   +I CG  H++VL   C G  ++ FG    GQ
Sbjct: 657 DYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVL---CSGAHLFAFGRNDYGQ 713

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG+ +                        AN   +A L  +   +++ R        +  
Sbjct: 714 LGLGR------------------------ANASSTANLQLQQQRFSYARLIEELEGKD-- 747

Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
                     + A G  H + ++ +G + + G ++HG L   +      P       + +
Sbjct: 748 --------IVRFACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPF-----PIDD 794

Query: 333 LDGVKVIQIAAGAEHSAVVTG 353
             G +V  +AAG  H+ V+TG
Sbjct: 795 FVGKRVALVAAGFYHTVVLTG 815



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 23/214 (10%)

Query: 25  EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           EE+   QQ +  +++G    GQLG     D   PQ +       V  +ACG  H + +T+
Sbjct: 589 EEDGSGQQYL--YTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTA 646

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 GK F++G+   GQLG   M + L P  V      ++    I  G+ H+  +   
Sbjct: 647 -----TGKAFAFGKNDYGQLGIDSMENQLVPVQVR-AGLEKHECLEIRCGYYHTIVLCSG 700

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSS------------PVKVSSFVNKNVHQIACGMRHSLV 192
             LF  G   +GQLG G   + S+               +     K++ + ACG  H++ 
Sbjct: 701 AHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVA 760

Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
           +  + +   +Y FG    GQLG      R    P
Sbjct: 761 VSDNGV---MYVFGRNNHGQLGTGDTNERVYPFP 791


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNIACGQMCSMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 336



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 29/297 (9%)

Query: 63  LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
           L S+    +    G  VL  T     +  ++F  G   SG LG G++   + P+ +    
Sbjct: 42  LQSIRQACVFGSAGNEVLYTT-----VDDEIFVLGTNCSGCLGIGDIQSTIEPRRLNSLT 96

Query: 123 GHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNV 180
           G +  I  +S G   H    +  G +FT G   + QLG+G       P  +S+   NK V
Sbjct: 97  GKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154

Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
            ++ACG  HSLVL  D    +V+ +G    GQ+G      + +   +VT  L +  ++ I
Sbjct: 155 IEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVMNI 210

Query: 241 SANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVL 292
           +     S A+   G +Y WG         G +      C  +    +   + A G+ H L
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           VLT +G+V   G + +G L    + + + P  V +EK       ++I+IAA   HSA
Sbjct: 271 VLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK------DRIIEIAAC--HSA 319



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 108/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P +++S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCSGCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 274 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPV 303


>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Nomascus leucogenys]
          Length = 932

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           + ++WG  + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G V
Sbjct: 39  QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 93

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  ++GQLG  +  D   P  V      +  + +IS G  H+  ++ SG +FT G G
Sbjct: 94  FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 151

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           + GQLGH       +P +V   +   V QIACG +H+L  +       +Y FG G RGQL
Sbjct: 152 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 209

Query: 214 G 214
           G
Sbjct: 210 G 210



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 20/223 (8%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
           P+L+   +  ++  ++CG  H LAL +      G+ F+WG+ S GQLG G E      P+
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFFTWGKNSHGQLGLGKEFPSQASPQ 64

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
            V   +G    +  ++AG  HS  +S SG +F  G    GQLG  D +   SP  V    
Sbjct: 65  RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
            + V  I+CG  H+ VL K      V+ FG+G  GQLG   D +     P+  + L   E
Sbjct: 123 TQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQLG--HDSMNDEVNPRRVLELMGSE 177

Query: 237 IVGISANGDRSAA-LSAEGHLYTWGRGFNS------TSDVNCP 272
           +  I+     + A + + G +Y +G G         T +V CP
Sbjct: 178 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG    GQLG     D  SP  + L     V  ++CG  H   LT       G VF+
Sbjct: 93  VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
           +G GS GQLGH  M D + P+ V    G    +T I+ G  H+  FV  SG ++  G G 
Sbjct: 148 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205

Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
            GQLG G    H+  VK  S V 
Sbjct: 206 RGQLGTG----HTCNVKCPSPVK 224



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 97/253 (38%), Gaps = 42/253 (16%)

Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           S + P  +     + + Q++CG  H L L  D    Q + +G    GQLG+ K+   S +
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQA 61

Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLP 276
            PQ    L  I +  ++A G  S ALS  G ++ WG       G +   D    C   L 
Sbjct: 62  SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 121

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
            +      + G  H  VLT  G V   G    G L          P      +V  L G 
Sbjct: 122 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGS 176

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +V QIA G +H+              +++ P            +  I  +G G  GQLG 
Sbjct: 177 EVTQIACGRQHT--------------LAFVP-----------SSGLIYAFGCGARGQLGT 211

Query: 397 GNTCDQIHPKVVN 409
           G+TC+   P  V 
Sbjct: 212 GHTCNVKCPSPVK 224


>gi|145351110|ref|XP_001419929.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580162|gb|ABO98222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 783

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 162/365 (44%), Gaps = 67/365 (18%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT----SPSSVIGG 91
           V+SWG G  G+LG     D   P  + L   +    LACG AH LA+     + S   GG
Sbjct: 95  VYSWGEGAGGKLGLPSAQDAEMPTRVELDGRAVT--LACGVAHSLAVVRDADASSDGDGG 152

Query: 92  KVFSWG--RGSSGQLGHGEMVDALYPKPVTFFDGHR------------YTITHISAGWNH 137
               WG    + G LG  E       + VTFF G                +  +S G  H
Sbjct: 153 DACVWGDPNAAPGLLGRPEA------RAVTFFPGKISFAMDSISAGGGVKVVQVSCGPCH 206

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLK 195
           +  V+++G  FT G+G+F  LGHGD     +P ++ +F   N  V ++ACG+ H+  ++ 
Sbjct: 207 TACVTETGACFTWGEGSFYALGHGDRECQRAPRELETFRRDNRVVLRVACGVWHTAAIVA 266

Query: 196 ------------------DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT---IGLHD 234
                             D +  +++ +G G+ GQLG+    +   S+P  T   +G   
Sbjct: 267 AVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQLGIRG--VEEASVPTATSDQLGKPG 324

Query: 235 IEIVGISANGDRSAALSAEGHLYTWG--RGFNSTSDVNCPQSLPSSLSFSQAAL--GWNH 290
            E+  +S     + AL+++G ++  G     +++  V     LP+  + S +A+  G NH
Sbjct: 325 SEVCNVSCGQHHTVALTSKGDVWLAGCVGKVDNSLRVKVFTRLPNFETGSVSAVESGDNH 384

Query: 291 VLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
           V+  T DG V   G   +G L    +D ++         A E++ +L G  V++IA G  
Sbjct: 385 VVAATRDGRVFSWGVGKNGRLGHGKNDRDK--------AAPEEIESLRGRTVLRIACGPT 436

Query: 347 HSAVV 351
            SA V
Sbjct: 437 SSACV 441



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 158/429 (36%), Gaps = 101/429 (23%)

Query: 49  TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
           T R     +P++L  +    V  +A G  H LA T       G V+SWG G+ G+LG   
Sbjct: 56  TARWRRVDTPRVLEGTDTLDVVEIAIGARHGLARTR-----AGAVYSWGEGAGGKLGLPS 110

Query: 109 MVDALYPKPVTFFDGHRYT----ITHISAGWNHSGFVSD----SGCLFTCGDGTFGQLGH 160
             DA  P  V   DG   T    + H  A    +   SD      C++   +   G LG 
Sbjct: 111 AQDAEMPTRVE-LDGRAVTLACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGR 169

Query: 161 GDYRSHS-SPVKVSSFVNK-------NVHQIACGMRHSLVLLKD--CLG---NQVYGFGS 207
            + R+ +  P K+S  ++         V Q++CG  H+  + +   C        Y  G 
Sbjct: 170 PEARAVTFFPGKISFAMDSISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGH 229

Query: 208 GKRGQLGVSKD----RIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSA--------EG 254
           G R      ++    R  +  + +V  G+ H   IV    N  R   + A        +G
Sbjct: 230 GDRECQRAPRELETFRRDNRVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDG 289

Query: 255 HLYTWGR------GFNSTSDVNCPQSLPSSL-----SFSQAALGWNHVLVLTGDGEVLML 303
            L+TWG       G     + + P +    L          + G +H + LT  G+V + 
Sbjct: 290 ELFTWGDGESGQLGIRGVEEASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLA 349

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH---SAVVTGKFHWVRL 360
           G                      + KV N   VKV       E    SAV +G  H    
Sbjct: 350 G---------------------CVGKVDNSLRVKVFTRLPNFETGSVSAVESGDNH---- 384

Query: 361 FIISYTPFFPPFFINVIAENR--AIMTWGWGEHGQLGLG-NTCDQIHPKVVNLGDEFQNR 417
                          V+A  R   + +WG G++G+LG G N  D+  P+ +   +  + R
Sbjct: 385 ---------------VVAATRDGRVFSWGVGKNGRLGHGKNDRDKAAPEEI---ESLRGR 426

Query: 418 DTQLEVFCG 426
            T L + CG
Sbjct: 427 -TVLRIACG 434



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 89/237 (37%), Gaps = 52/237 (21%)

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP 272
           R R V  P+V  G   +++V I+       A +  G +Y+WG       G  S  D   P
Sbjct: 58  RWRRVDTPRVLEGTDTLDVVEIAIGARHGLARTRAGAVYSWGEGAGGKLGLPSAQDAEMP 117

Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG-----------GSHHGMLSDPE-RVSST 320
             +         A G  H L +  D +    G            +  G+L  PE R  + 
Sbjct: 118 TRVELDGRAVTLACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTF 177

Query: 321 RP--LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            P  +S A++ +S   GVKV+Q++ G  H+A VT                          
Sbjct: 178 FPGKISFAMDSISAGGGVKVVQVSCGPCHTACVT-------------------------- 211

Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ--LEVFCGSGFTYAI 433
           E  A  TWG G    LG G+   Q  P+ +    E   RD +  L V CG   T AI
Sbjct: 212 ETGACFTWGEGSFYALGHGDRECQRAPREL----ETFRRDNRVVLRVACGVWHTAAI 264


>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1590

 Score =  103 bits (257), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 109/403 (27%), Positives = 166/403 (41%), Gaps = 48/403 (11%)

Query: 62  NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
           N   ++    +A G  H LAL S      G V++WG    GQLG     +   P  V+  
Sbjct: 557 NFMLITVTPKIAAGARHSLALKS-----NGTVWAWGNNGDGQLGDETTKNRTIPAQVSNV 611

Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
           +     IT I  G +HS  +   G ++  G    GQLG G     ++PV++S     ++ 
Sbjct: 612 NA----ITTIDGGASHSLALKSDGTVWVWGANWDGQLGDGTNTRKTTPVQISGL--SDII 665

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
            IACGM HS+ L  D     V+ FG    GQLG   +  R+   P    GL D+  + I+
Sbjct: 666 SIACGMYHSIALKSD---GTVWAFGRNDYGQLGDGTNVYRNK--PVQVSGLSDV--IAIA 718

Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
                  AL ++G ++ WG       G  +T++ N P  + S  + +  A GW H L L 
Sbjct: 719 GGDYHCLALKSDGIVWAWGNNESGQLGDGTTTNRNTPVQVSSISNVAAIARGWVHSLALK 778

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI-QIAAGAEHSAVVTGK 354
            D  V   G +  G L D    + T P+++                IA  ++ +    G+
Sbjct: 779 SDETVWAWGSNGSGQLGDGTTTNRTTPVNITNINNIIAIAGGGGYTIALKSDGTGWTCGE 838

Query: 355 FHW-------VRLFIISY--TPFFPPFFINVIA------------ENRAIMTWGWGEHGQ 393
           + W          +  SY  TP       +V+A            ++  + TWG   +GQ
Sbjct: 839 YGWDYSENNGSSYWGYSYRTTPDQVAGINDVVAVAGGWQHIVVLKQDGTVWTWGVNWYGQ 898

Query: 394 LGLGNTCDQIHPKVV--NLGDEFQNRDTQLEVFCGSGFTYAIS 434
           LG G T D+  P  V  NLG+       +  +   SG +Y  S
Sbjct: 899 LGDGTTTDRDTPVQVDINLGEMPDTFPPEGSISINSGVSYTNS 941



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 93/306 (30%), Positives = 132/306 (43%), Gaps = 41/306 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WGA  DGQLG G    + +P  + +S LS +  +ACG  H +AL S      G V++
Sbjct: 633 VWVWGANWDGQLGDGTNTRKTTP--VQISGLSDIISIACGMYHSIALKS-----DGTVWA 685

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           +GR   GQLG G  V    P  V+        +  I+ G  H   +   G ++  G+   
Sbjct: 686 FGRNDYGQLGDGTNVYRNKPVQVSGLS----DVIAIAGGDYHCLALKSDGIVWAWGNNES 741

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   + ++PV+VSS    NV  IA G  HSL L  D     V+ +GS   GQLG 
Sbjct: 742 GQLGDGTTTNRNTPVQVSSI--SNVAAIARGWVHSLALKSD---ETVWAWGSNGSGQLGD 796

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT----------------W 259
                R+  +           I+ I+  G  + AL ++G  +T                W
Sbjct: 797 GTTTNRTTPVNITN----INNIIAIAGGGGYTIALKSDGTGWTCGEYGWDYSENNGSSYW 852

Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           G  + +T     P  +         A GW H++VL  DG V   G + +G L D      
Sbjct: 853 GYSYRTT-----PDQVAGINDVVAVAGGWQHIVVLKQDGTVWTWGVNWYGQLGDGTTTDR 907

Query: 320 TRPLSV 325
             P+ V
Sbjct: 908 DTPVQV 913


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 121/249 (48%), Gaps = 25/249 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 112 EVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 165

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT     +  + +I+ G   S  V ++G +F  G 
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSK-VVVNIACGQMCSMAVVNTGEVFVWGY 224

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 225 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 281

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-------- 262
           LG      +S   P V      IEI    +    SAA +  GH+Y WG  RG        
Sbjct: 282 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQCRGQSVTLPHL 340

Query: 263 --FNSTSDV 269
             F+ST DV
Sbjct: 341 THFSSTDDV 349



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 134/315 (42%), Gaps = 42/315 (13%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S +                    + +  ++F  G    G 
Sbjct: 11  ATLSSLKMLDVGKWPIFSLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGC 70

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G++   + P+ +    G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 71  LGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 129

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
            +   P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G      + 
Sbjct: 130 NAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQP 186

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
           +   +VT  L    +V I+     S A+   G ++ WG         G +      C  +
Sbjct: 187 IP-RRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVA 245

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 246 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK----- 300

Query: 335 GVKVIQIAAGAEHSA 349
             ++I+IAA   HSA
Sbjct: 301 -DRIIEIAAC--HSA 312



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 60  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT--EGEVFTWG 117

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 118 HNAYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 176

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 177 VGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSG 236

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 237 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 266

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 267 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPV 296


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 121/249 (48%), Gaps = 25/249 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT     +  + +I+ G   S  V ++G +F  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSK-VVVNIACGQMCSMAVVNTGEVFVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-------- 262
           LG      +S   P V      IEI    +    SAA +  GH+Y WG  RG        
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQCRGQSVTLPHL 323

Query: 263 --FNSTSDV 269
             F+ST DV
Sbjct: 324 THFSSTDDV 332



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 22/272 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G   +   P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L    +V I+     S A+   G ++ WG     
Sbjct: 153 GYNNSGQVGSGSTANQPIP-RRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           + + P  V +EK       ++I+IAA   HSA
Sbjct: 272 NQSYPTPVVVEK------DRIIEIAAC--HSA 295



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT--EGEVFTWG 100

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 101 HNAYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 160 VGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSG 219

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 220 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 249

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 250 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPV 279


>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 570

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 160/404 (39%), Gaps = 61/404 (15%)

Query: 22  PKIEEEEEEQQVV---KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAH 78
           P   + E     V      +WG    GQLG G      +P  ++L + +  + +  G  H
Sbjct: 42  PVAAQNEPSPSAVGSDAFLAWGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFH 101

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
            LALTS      G V +WGR  SGQLG G  V +  P  V    G   T+T ++AG+ HS
Sbjct: 102 SLALTS-----AGTVLAWGRNDSGQLGDGTTVSSSTPVVVRLPVG--VTVTAVAAGFGHS 154

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
             ++ +G +   G  +FGQLG G   S S+PV V   V   V  +A G  HSL L     
Sbjct: 155 LALTSTGVVLAWGSNSFGQLGDGTTVSSSTPVAVRLPVGVTVTAVAAGSGHSLALTSV-- 212

Query: 199 GNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
                 +G+   GQLG    VS     +V LP  T       +  ++     S AL++ G
Sbjct: 213 -GAALAWGNNFSGQLGDGTTVSSSTPVAVRLPVGT------TVTAVAGGSHHSLALTSAG 265

Query: 255 HLYTWGRGFN--------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
               WG  F+         +S      SLP   + +  A G  H + LT  G  L  G +
Sbjct: 266 AALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSN 325

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
             G L D     S+ P++V+L   + +  +       GA + A                 
Sbjct: 326 GDGQLGDGTNADSSVPIAVSLPAGATITAIAAHD---GAHNLA----------------- 365

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                     I    A + WG    GQLG G   D   P  V+L
Sbjct: 366 ----------ITSTGAALAWGGNGDGQLGDGTNADSSVPIAVSL 399



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 139/324 (42%), Gaps = 28/324 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG    GQLG G      +P ++ L    +V+ +A G  H LALTS      G V 
Sbjct: 110 TVLAWGRNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTST-----GVVL 164

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  S GQLG G  V +  P  V    G   T+T ++AG  HS  ++  G     G+  
Sbjct: 165 AWGSNSFGQLGDGTTVSSSTPVAVRLPVG--VTVTAVAAGSGHSLALTSVGAALAWGNNF 222

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   S S+PV V   V   V  +A G  HSL L           +G    GQLG
Sbjct: 223 SGQLGDGTTVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTS---AGAALAWGGNFSGQLG 279

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWGR--------GFNS 265
              D     S   V + L     V   A GD  S AL++ G    WG         G N+
Sbjct: 280 ---DGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNA 336

Query: 266 TSDVNCPQSLPSSLSFSQAAL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            S V    SLP+  + +  A     H L +T  G  L  GG+  G L D     S+ P++
Sbjct: 337 DSSVPIAVSLPAGATITAIAAHDGAHNLAITSTGAALAWGGNGDGQLGDGTNADSSVPIA 396

Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
           V+L       G  +  IAA  EHS
Sbjct: 397 VSLPA-----GTTITAIAASVEHS 415



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 6/156 (3%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG    GQLG G      +P +++L   ++V+ LA G AH +ALTS      G   +WG
Sbjct: 269 AWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTS-----AGAALAWG 323

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
               GQLG G   D+  P  V+   G   T      G  H+  ++ +G     G    GQ
Sbjct: 324 SNGDGQLGDGTNADSSVPIAVSLPAGATITAIAAHDG-AHNLAITSTGAALAWGGNGDGQ 382

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           LG G     S P+ VS      +  IA  + HSL L
Sbjct: 383 LGDGTNADSSVPIAVSLPAGTTITAIAASVEHSLAL 418


>gi|195449389|ref|XP_002072053.1| GK22640 [Drosophila willistoni]
 gi|194168138|gb|EDW83039.1| GK22640 [Drosophila willistoni]
          Length = 1261

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 95/176 (53%), Gaps = 16/176 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLS--SVSMLACGGAHVLALTSPSSVIGGK 92
           ++SWG+   GQLG     +  +    ++L+S+    ++ +ACGG H   ++  S+V G  
Sbjct: 148 IYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLISKSSAVYG-- 205

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFTC 150
              WGR + GQLG  ++ D  YP  +T     G RY    ++ G   S F++  G LFTC
Sbjct: 206 ---WGRNNRGQLGLNDLSDRPYPTELTTLRPCGVRY----VACGDEFSVFLTHKGALFTC 258

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           GDGT GQLGHG+  +  +P KV    +K V Q+AC   ++L  +      Q+YGFG
Sbjct: 259 GDGTHGQLGHGNLSNALAPFKVMKLRDKPVTQVACAKHYTLAFVPSI--GQLYGFG 312



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 17/228 (7%)

Query: 39  WGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +   T GQ+   R    LSP +L+       VS +ACG +H L LT       G V SWG
Sbjct: 47  YECETHGQVHNTRKRSRLSPFRLVAGLQDIEVSAIACGSSHSLVLTK-----SGVVMSWG 101

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
               GQL  G+  ++  P  V   D  +     I+ G  HS  +++ G +++ G   +GQ
Sbjct: 102 VNDCGQL--GQTTNSRVPTMVKVPD-KKPLFVQIACGNEHSLALTNDGTIYSWGSNRYGQ 158

Query: 158 LGHGDYRSHSS---PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           LG  +  + S+   P+ ++S     +  IACG  H  ++ K    + VYG+G   RGQLG
Sbjct: 159 LGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLISK---SSAVYGWGRNNRGQLG 215

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           ++    R    P     L    +  ++   + S  L+ +G L+T G G
Sbjct: 216 LNDLSDRPY--PTELTTLRPCGVRYVACGDEFSVFLTHKGALFTCGDG 261



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 22/232 (9%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           ++ I+ G +HS  ++ SG + + G    GQLG        + VKV       V QIACG 
Sbjct: 78  VSAIACGSSHSLVLTKSGVVMSWGVNDCGQLGQTTNSRVPTMVKVPDKKPLFV-QIACGN 136

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDR 246
            HSL L  D     +Y +GS + GQLG+S+ + + +   P     +H I I  I+  G+ 
Sbjct: 137 EHSLALTND---GTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNH 193

Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTG 296
              +S    +Y WGR      G N  SD   P  L    P  + +   A G    + LT 
Sbjct: 194 CFLISKSSAVYGWGRNNRGQLGLNDLSDRPYPTELTTLRPCGVRY--VACGDEFSVFLTH 251

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
            G +   G   HG L      ++  P      KV  L    V Q+A    ++
Sbjct: 252 KGALFTCGDGTHGQLGHGNLSNALAPF-----KVMKLRDKPVTQVACAKHYT 298



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 133/320 (41%), Gaps = 59/320 (18%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACG 186
           +  I+ G  ++ F++  G ++ C   T GQ+ +   RS  SP + V+   +  V  IACG
Sbjct: 27  LRDIAFGDRYTLFLTAKGKVYECE--THGQVHNTRKRSRLSPFRLVAGLQDIEVSAIACG 84

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
             HSLVL K      V  +G    GQLG  +  R+ ++    V +       V I+   +
Sbjct: 85  SSHSLVLTK---SGVVMSWGVNDCGQLGQTTNSRVPTM----VKVPDKKPLFVQIACGNE 137

Query: 246 RSAALSAEGHLYTWGR------GFNSTSDV-NC--PQSLPS--SLSFSQAALGWNHVLVL 294
            S AL+ +G +Y+WG       G +   ++ NC  P  L S   +  +  A G NH  ++
Sbjct: 138 HSLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLI 197

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           +    V   G ++ G L   +   S RP    L   + L    V  +A G E S  +T K
Sbjct: 198 SKSSAVYGWGRNNRGQLGLNDL--SDRPYPTEL---TTLRPCGVRYVACGDEFSVFLTHK 252

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDE 413
                                      A+ T G G HGQLG GN  + + P KV+ L D+
Sbjct: 253 --------------------------GALFTCGDGTHGQLGHGNLSNALAPFKVMKLRDK 286

Query: 414 FQNRDTQLEVFCGSGFTYAI 433
                   +V C   +T A 
Sbjct: 287 -----PVTQVACAKHYTLAF 301



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 58/258 (22%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           + +  IA G R++L L       +VY   +   GQ+  ++ R R +S  ++  GL DIE+
Sbjct: 25  EQLRDIAFGDRYTLFLTAK---GKVYECET--HGQVHNTRKRSR-LSPFRLVAGLQDIEV 78

Query: 238 VGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLS-FSQAALGWNH 290
             I+     S  L+  G + +WG       G  + S V     +P     F Q A G  H
Sbjct: 79  SAIACGSSHSLVLTKSGVVMSWGVNDCGQLGQTTNSRVPTMVKVPDKKPLFVQIACGNEH 138

Query: 291 VLVLTGDGEVLMLGGSHHGML--SDPERVSSTR-PLSVALEKVSNLDGVKVIQIAAGAEH 347
            L LT DG +   G + +G L  S+PE +S+   P+      ++++ G+ +  IA G  H
Sbjct: 139 SLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPM-----HLTSIHGIPIATIACGGNH 193

Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-- 405
                        F+IS              ++ A+  WG    GQLGL +  D+ +P  
Sbjct: 194 C------------FLIS--------------KSSAVYGWGRNNRGQLGLNDLSDRPYPTE 227

Query: 406 ---------KVVNLGDEF 414
                    + V  GDEF
Sbjct: 228 LTTLRPCGVRYVACGDEF 245


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 151/363 (41%), Gaps = 52/363 (14%)

Query: 56  LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
           L P+  +     +V  + CG  H + +        G V++ G    GQLGH +      P
Sbjct: 7   LEPRRCDFFINKNVRDVGCGSRHTVFVLD-----DGTVYTCGCNDLGQLGHDKSRKK--P 59

Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSS 174
             V   D    TI  +S G  H+  ++D G +F+ G    GQ+G      +   P  + S
Sbjct: 60  DQVGALDAQ--TIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKS 117

Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
             +  + Q+ACG  HSL L K+   + +Y +G  + GQLG+  + I+  S P+    L  
Sbjct: 118 LYDIQIVQVACGHHHSLALSKE---SDIYSWGQNQYGQLGLGSE-IKKESAPRHIKSLAG 173

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAAL 286
           I    I+A G  S AL+  G ++ WGR      G N  +D + P  L S  S        
Sbjct: 174 IPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICC 233

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
           G +H   LT +G V   G   +G L          P      KV  L G  V QIA G +
Sbjct: 234 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP-----RKVFELMGSIVTQIACGRQ 288

Query: 347 HSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
           H+              +++ P            +  I ++G G +GQLG G+T ++  P 
Sbjct: 289 HT--------------LAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPF 323

Query: 407 VVN 409
            V 
Sbjct: 324 TVK 326



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 14/182 (7%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
           ++SWG    GQLG G  +  E +P+  ++ SL+ +    +A GG H  ALT     + G 
Sbjct: 142 IYSWGQNQYGQLGLGSEIKKESAPR--HIKSLAGIPFAHIAAGGGHSFALT-----MSGA 194

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F WGR   GQLG  +  D   P  +      +  I HI  G +H+  ++  G +FT G 
Sbjct: 195 IFGWGRNKFGQLGLNDETDRSAPALLKSLRSQK--IIHICCGEDHTAALTKEGGVFTFGA 252

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G +GQLGH       +P KV   +   V QIACG +H+L  +      ++Y FG G  GQ
Sbjct: 253 GGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 310

Query: 213 LG 214
           LG
Sbjct: 311 LG 312



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 137/308 (44%), Gaps = 52/308 (16%)

Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
            L P+   FF      +  +  G  H+ FV D G ++TCG    GQLGH   +S   P +
Sbjct: 6   VLEPRRCDFFINK--NVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHD--KSRKKPDQ 61

Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVT 229
           V +   + +  ++CG  H+L L       QV+ +G    GQ+G  V++D IR   +P+  
Sbjct: 62  VGALDAQTIVAVSCGEAHTLALNDK---GQVFSWGHAAHGQIGLSVAEDYIR---VPRNI 115

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS-TSDVNCPQSLPS--SLS 280
             L+DI+IV ++     S ALS E  +Y+WG+      G  S     + P+ + S   + 
Sbjct: 116 KSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIP 175

Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
           F+  A G  H   LT  G +   G +  G L   +    + P   AL K  +L   K+I 
Sbjct: 176 FAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAP---ALLK--SLRSQKIIH 230

Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
           I  G +H+A +T                          +   + T+G G +GQLG  +T 
Sbjct: 231 ICCGEDHTAALT--------------------------KEGGVFTFGAGGYGQLGHNSTN 264

Query: 401 DQIHPKVV 408
            +++P+ V
Sbjct: 265 HEVNPRKV 272



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 145/322 (45%), Gaps = 27/322 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
           V++ G    GQLG    HD+   +   + +L + +++A  CG AH LAL        G+V
Sbjct: 39  VYTCGCNDLGQLG----HDKSRKKPDQVGALDAQTIVAVSCGEAHTLALND-----KGQV 89

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           FSWG  + GQ+G     D +   P      +   I  ++ G +HS  +S    +++ G  
Sbjct: 90  FSWGHAAHGQIGLSVAEDYIR-VPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQN 148

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            +GQLG G + +  S+P  + S        IA G  HS  L    +   ++G+G  K GQ
Sbjct: 149 QYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFAL---TMSGAIFGWGRNKFGQ 205

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LG++ +  RS   P +   L   +I+ I    D +AAL+ EG ++T+G       G NST
Sbjct: 206 LGLNDETDRSA--PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 263

Query: 267 SDVNCPQSLPSSLS--FSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           +    P+ +   +    +Q A G  H L      G +   G   +G L      +   P 
Sbjct: 264 NHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPF 323

Query: 324 SVALEKVSNLDGVKVIQIAAGA 345
           +V    +++ D V+ +  A G 
Sbjct: 324 TVKGNWLTHEDYVQRLPEANGC 345



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
           +V+SWG    GQ+G     D +  P+  N+ SL  + +  +ACG  H LAL+  S     
Sbjct: 88  QVFSWGHAAHGQIGLSVAEDYIRVPR--NIKSLYDIQIVQVACGHHHSLALSKESD---- 141

Query: 92  KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
            ++SWG+   GQLG G E+     P+ +    G  +   HI+AG  HS  ++ SG +F  
Sbjct: 142 -IYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPF--AHIAAGGGHSFALTMSGAIFGW 198

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D    S+P  + S  ++ +  I CG  H+  L K+     V+ FG+G  
Sbjct: 199 GRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE---GGVFTFGAGGY 255

Query: 211 GQLG 214
           GQLG
Sbjct: 256 GQLG 259


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 11/228 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG     QLG G  +  L P Q+    S   V  +ACG  H L LTS      G+V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS-----DGEV 173

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G  
Sbjct: 174 FAWGYNNSGQVGSGPTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQL
Sbjct: 233 GNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQL 289

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           G      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 290 GTGNKSNQSYPTPVVVEKDRIIEIAACHST-HTSAAKTQGGHVYMWGQ 336



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      S +  ++F  G   SG 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G+    + P+ +    G +       +G  H    +  G +FT G   + QLG+G  
Sbjct: 78  LGLGDAQSTIEPRRLDSLSGKKIACLSYGSG-PHVVLATTEGEVFTWGHNAYSQLGNGTT 136

Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
                P ++S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G      + 
Sbjct: 137 NHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGPTANQP 193

Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS--------TSDVNCPQS 274
           +   +VT  L +  +V I+     S A+   G +Y WG   N              C  +
Sbjct: 194 IP-RRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVA 252

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
               +   + A G+ H LVLT +G+V   G + +G L    + + + P  V +EK     
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK----- 307

Query: 335 GVKVIQIAA 343
             ++I+IAA
Sbjct: 308 -DRIIEIAA 315


>gi|308799813|ref|XP_003074688.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116000858|emb|CAL50538.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 604

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 178/450 (39%), Gaps = 99/450 (22%)

Query: 24  IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS------------LSSVSM 71
           + + E ++    + ++G G  GQLG G   +  +P  + +                 V  
Sbjct: 153 VTDAEGDKVGTTIATFGRGFHGQLGLGSYDNHAAPAFVRMGDELARGHDSDDEHFEGVDS 212

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH--GEMVDALYPKPVTFFDGHRYTIT 129
           +A GG+H +AL+       G V SWG  SSG+LG+     ++   P+ V         IT
Sbjct: 213 IALGGSHCVALSRD-----GGVISWGLASSGELGYTGNTPIEVNVPRRVFVGIDICTKIT 267

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            ++ G NH+  + + G LF CG G  GQLGHG +R  +   +V +    +V    CG  H
Sbjct: 268 QVTTGSNHTMAIDEFGRLFACGRGRHGQLGHGTFRDAAPFSRVEALKGMHVVSAVCGGSH 327

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS-------VSLPQVTIGLHDIE--IVGI 240
           S+ +  D  GN V+ +G  + GQLG+      +       V  P +   L+D++  +  +
Sbjct: 328 SVCITSD--GN-VWAWGDCRYGQLGLGDLTFAAAAGWNNGVPWPCLVESLNDMDEPVASV 384

Query: 241 SANGDRSAALSAEGHLYTWGRG-----------------------------------FNS 265
           SA G  S  ++A G ++  GRG                                   F  
Sbjct: 385 SAGGAHSIFVTAGGRMFVCGRGKHGALGVGKNPFLTIGPPTSACGNRLTPEAVNIHHFVR 444

Query: 266 TSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
            +D +  Q+     S       + AA G  H   LT  G V   G + +G L   ++ S 
Sbjct: 445 RADGSVDQNRVQQCSCGPRCRVAVAAAGATHSCCLTACGGVFTTGENSYGQLGHGDKKS- 503

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
               +    +V  L G +VI +A+G  H+  +                      +     
Sbjct: 504 ----TFVFTRVEALRGKRVITVASGHNHTGAM----------------------VENTDG 537

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           + ++ TWG G+ GQLG GN      P+ V 
Sbjct: 538 SNSLYTWGRGDWGQLGTGNMRSYTTPQEVK 567



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 50/242 (20%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-------PQLLNLSSLSS----VSMLACGGAHVLALT 83
            VW+WG    GQLG G L    +       P    + SL+     V+ ++ GGAH + +T
Sbjct: 336 NVWAWGDCRYGQLGLGDLTFAAAAGWNNGVPWPCLVESLNDMDEPVASVSAGGAHSIFVT 395

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMV------------DALYPKPVTFFD--------- 122
           +     GG++F  GRG  G LG G+              + L P+ V             
Sbjct: 396 A-----GGRMFVCGRGKHGALGVGKNPFLTIGPPTSACGNRLTPEAVNIHHFVRRADGSV 450

Query: 123 ----------GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
                     G R  +   +AG  HS  ++  G +FT G+ ++GQLGHGD +S     +V
Sbjct: 451 DQNRVQQCSCGPRCRVAVAAAGATHSCCLTACGGVFTTGENSYGQLGHGDKKSTFVFTRV 510

Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLG-NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
            +   K V  +A G  H+  ++++  G N +Y +G G  GQLG     +RS + PQ   G
Sbjct: 511 EALRGKRVITVASGHNHTGAMVENTDGSNSLYTWGRGDWGQLGTGN--MRSYTTPQEVKG 568

Query: 232 LH 233
            +
Sbjct: 569 FN 570


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  +   V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGNPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENIRDQ-TISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 62/232 (26%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT  +     ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTIGN----PVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGV 215
                                   C  N          +Y FG G+ G+LG+
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329


>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
 gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
          Length = 994

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 91/192 (47%), Gaps = 10/192 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++ WG    GQLG  +      SPQ L       V+ ++ GG H   L+     + G VF
Sbjct: 137 LFVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLS-----LSGVVF 191

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S+GQLG G+  D   P  V    G +     IS G  H+  +S  G +FT G G 
Sbjct: 192 GWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK--TVSISCGGEHTATLSKGGTVFTFGSGG 249

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           FGQLGH   +    P  V+      V Q+ CG  H+LV       N++Y FG G +GQLG
Sbjct: 250 FGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDS--SNRIYSFGCGMQGQLG 307

Query: 215 VSKDRIRSVSLP 226
             +   +SV LP
Sbjct: 308 NGEQVKQSVPLP 319



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 11/189 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ WG+ + GQLG G   D   P ++   S      ++CGG H   L+      GG VF+
Sbjct: 190 VFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSK-----GGTVFT 244

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGT 154
           +G G  GQLGH  + D  +P+ V    G +  ++ ++ G +H+    DS   +++ G G 
Sbjct: 245 FGSGGFGQLGHNSLKDEHHPRLVAELWGSK--VSQVTCGRHHTLVFEDSSNRIYSFGCGM 302

Query: 155 FGQLGHGDYRSHSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            GQLG+G+    S P+ V   +      + ++  G  HS  L     GN+     SG  G
Sbjct: 303 QGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAGEHHSFALFFKNPGNESEKPKSGSNG 362

Query: 212 QLGVSKDRI 220
            +    DR+
Sbjct: 363 GILTLNDRM 371



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 134/319 (42%), Gaps = 45/319 (14%)

Query: 51  RLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
           RLH+E + + L    L +  +  + CG A  + L        GKV               
Sbjct: 59  RLHNEDADEKLEPLQLQNERIRSIVCGEAGAVLLAD-----DGKVLV------------- 100

Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHS 167
           M  +   +P+   D  +  +  I+ G  HS  +S+ G LF  G+   GQLG   +     
Sbjct: 101 MDQSTVCRPLKGLDNRQ--VIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQ 158

Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSL 225
           SP  + S     V QI+ G  HS VL    L   V+G+GS   GQLG+  + DR     +
Sbjct: 159 SPQHLQSLCEIPVAQISAGGNHSFVL---SLSGVVFGWGSNSAGQLGLGDTTDRF----I 211

Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL 279
           P +   L   + V IS  G+ +A LS  G ++T+G       G NS  D + P+ L + L
Sbjct: 212 PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPR-LVAEL 270

Query: 280 ---SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
                SQ   G +H LV       +   G    G L + E+V  + PL V L   +    
Sbjct: 271 WGSKVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLP--TECTE 328

Query: 336 VKVIQIAAGAEHSAVVTGK 354
             + ++ AG  HS  +  K
Sbjct: 329 FTMEKLIAGEHHSFALFFK 347



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 121/323 (37%), Gaps = 78/323 (24%)

Query: 96  WGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +G G   Q+ HG   + ++ P            +  ISAG ++ GF+ +       G   
Sbjct: 13  FGLGKPEQVSHGNWGIKSICPSSA---------VQDISAGKSYVGFIRE-------GTAW 56

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
             +L + D      P+++    N+ +  I CG   +++L  D              G++ 
Sbjct: 57  ILRLHNEDADEKLEPLQLQ---NERIRSIVCGEAGAVLLADD--------------GKVL 99

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTS 267
           V         L     GL + +++ I+     S ALS +G L+ WG             +
Sbjct: 100 VMDQSTVCRPLK----GLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQA 155

Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
               PQ L S   +  +Q + G NH  VL+  G V   G +  G L   +      P  V
Sbjct: 156 GTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIV 215

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
                 +L G K + I+ G EH+A                           +++   + T
Sbjct: 216 -----KSLSGKKTVSISCGGEHTAT--------------------------LSKGGTVFT 244

Query: 386 WGWGEHGQLGLGNTCDQIHPKVV 408
           +G G  GQLG  +  D+ HP++V
Sbjct: 245 FGSGGFGQLGHNSLKDEHHPRLV 267


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 173/401 (43%), Gaps = 70/401 (17%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           P+LLN + +  V  +ACG  H   +T       G+VFSWG  + G+LGH   V    PK 
Sbjct: 196 PRLLNTTHIIDVQSVACGEKHAAIVTK-----QGEVFSWGVDNGGRLGHKVSVSVSDPKI 250

Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSF 175
           +      R  +  I+ G  H+  VS SG L+  G+GT   G  G    RS   P K+   
Sbjct: 251 IESLASTR--VKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP 308

Query: 176 VNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
           ++  ++ +IACG  H+ ++       Q++ +G G  G LG   D + +V+ P+    L  
Sbjct: 309 LDGISILKIACGHWHTAIISS---AGQLFAYGDGTFGVLG-HGDTL-TVARPKQVESLKG 363

Query: 235 IEIVGISANGDRSAAL----------SAEGHLYTWG---RGFNSTSDVN------CPQSL 275
           +    I+     +AA+          +  G L+TWG   RG    +D        C + L
Sbjct: 364 VRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL 423

Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
            +   F+Q +      +VLT  G V  +G   HG L +P     +   S+ L +   L  
Sbjct: 424 -NDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP----LSEDTSICLIE-GPLKT 477

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
             V +I++G+ H AV+T                           N  + TWG G  GQLG
Sbjct: 478 EFVREISSGSSHIAVLT--------------------------MNGKVFTWGKGTEGQLG 511

Query: 396 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           LG+  D+ +P +V   ++ Q       + CG  FT AI  H
Sbjct: 512 LGDYVDRSYPTLVEALEDKQVHS----IACGFNFTMAICLH 548



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 142/313 (45%), Gaps = 28/313 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG         P+++   + + V  +A G  H  A++     I G+++
Sbjct: 225 EVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVS-----ISGELY 279

Query: 95  SWGRGSS--GQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            WG G+   G  G        +P K     DG   +I  I+ G  H+  +S +G LF  G
Sbjct: 280 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDG--ISILKIACGHWHTAIISSAGQLFAYG 337

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  + + P +V S        IACG  H+  +++       +    +++ 
Sbjct: 338 DGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 397

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
           +G   RG+LG +  +++ V  P     L+D +   +S    ++  L+  G ++T      
Sbjct: 398 WGDADRGKLGHADKKMKLV--PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEH 455

Query: 260 GRGFNSTSDVN--CPQSLPSSLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           GR  N  S+    C    P    F  + + G +H+ VLT +G+V   G    G L   + 
Sbjct: 456 GRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDY 515

Query: 317 VSSTRPLSV-ALE 328
           V  + P  V ALE
Sbjct: 516 VDRSYPTLVEALE 528



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG    G+LG      +L P  +   +    + ++C  A  + LT     I G VF
Sbjct: 394 KLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLT-----ITGVVF 448

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    G+LG+    D      +   +G   T  +  IS+G +H   ++ +G +FT G 
Sbjct: 449 TIGSKEHGRLGNPLSEDT----SICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 504

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           GT GQLG GDY   S P  V +  +K VH IACG   ++ +
Sbjct: 505 GTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 43/283 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQV 202
           +F  G+     L HGD     + V +   +N     +V  +ACG +H+ ++ K     +V
Sbjct: 172 IFVWGEVPGNVLDHGDV--SKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQ---GEV 226

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G    G+LG  K  + SVS P++   L    +  I+     + A+S  G LY WG G
Sbjct: 227 FSWGVDNGGRLG-HKVSV-SVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEG 284

Query: 263 FNST----SDVNCPQSLPSSL-------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +            Q  P  L       S  + A G  H  +++  G++   G    G+L
Sbjct: 285 THCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVL 344

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
              + ++  RP     ++V +L GV+   IA G  H+A +  +   V+    S  P    
Sbjct: 345 GHGDTLTVARP-----KQVESLKGVRAKAIACGPWHTAAIVERMGTVK----SNAP---- 391

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                   +  + TWG  + G+LG  +   ++ P  V   ++F
Sbjct: 392 --------SGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF 426


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  ++ I+ G   S  V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMS-IACGQMCSMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    Q+Y +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA S  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKSQGGHVYMWGQ 336



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 44/316 (13%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G   SG 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
           LG G++   + P+ +    G +  I  +S G   H    +  G +FT G   + QLG+G 
Sbjct: 78  LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135

Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                 P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G      +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 192

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
            +   +VT  L +  ++ I+     S A+   G +Y WG         G +      C  
Sbjct: 193 PIP-RRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251

Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
           +    +   + A G+ H LVLT +G++   G + +G L    + + + P  V +EK    
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 307

Query: 334 DGVKVIQIAAGAEHSA 349
              ++I+IAA   HSA
Sbjct: 308 --DRIIEIAAC--HSA 319



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   I  WG   +GQLG GN  +Q +P  V
Sbjct: 274 -DEGQIYAWGANSYGQLGTGNKSNQSYPTPV 303


>gi|307194573|gb|EFN76865.1| Secretion-regulating guanine nucleotide exchange factor
           [Harpegnathos saltator]
          Length = 385

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 179/403 (44%), Gaps = 73/403 (18%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVI 89
           K+ SWGA + GQLG G L ++ + P+ ++LS       SV  +  GG H L L +     
Sbjct: 5   KLISWGANSHGQLGQGVLSEQCVLPKEIDLSGCDLRPESVKKIVGGGGHTLILDTE---- 60

Query: 90  GGKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
            G+V+S GR   GQ G  + E  + L  + ++  DG   T+  +  GW+ S  ++  G L
Sbjct: 61  -GRVYSCGRNDKGQAGVSNTERTNVLTFQRLSL-DGK--TMIDVCCGWDTSAALTKDGDL 116

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           +  G   +GQLG       S+   + +  +  V +I+ G+RH++V+  +     V   G+
Sbjct: 117 YLWGSNRYGQLGDDPSIHSSTSSPICTIQSGKVKRISMGLRHTVVVTDN---GTVLVCGA 173

Query: 208 GKRGQLGVSKDRIRSVSLPQ--VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
             +GQLG++    +     +   T GL D++ V    +    A L+ +G   T+  G N 
Sbjct: 174 NSKGQLGLTNMESKQSRDVRHCFTAGLTDVDHVACGEHHTVVATLN-KGTFTTYFFGDNK 232

Query: 266 TSDV-----NCPQSLP--------SSLSFS-QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                     C +  P        S  S S Q   GW+H  +L+ DG V   G + +G L
Sbjct: 233 HGQAGIDPRECTRICPAYRFVRCDSRFSVSIQIHAGWSHTNILS-DGAVYSWGRNSYGQL 291

Query: 312 ----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
               S+ E   S R     +++V NL   K++Q++ G+EH+                   
Sbjct: 292 GRGQSEEEGCESWR-----MQRVENLP--KIVQLSVGSEHNV------------------ 326

Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                    +AE   I  WGW EHG  G GNT D + P+ + L
Sbjct: 327 --------ALAETGTIFCWGWNEHGNCGNGNTKDVLLPERLPL 361


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 173/401 (43%), Gaps = 70/401 (17%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           P+LLN + +  V  +ACG  H   +T       G+VFSWG  + G+LGH   V    PK 
Sbjct: 194 PRLLNTTHIIDVQSVACGEKHAAIVTK-----QGEVFSWGVDNGGRLGHKVSVSVSDPKI 248

Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSF 175
           +      R  +  I+ G  H+  VS SG L+  G+GT   G  G    RS   P K+   
Sbjct: 249 IESLASTR--VKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP 306

Query: 176 VNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
           ++  ++ +IACG  H+ ++       Q++ +G G  G LG   D + +V+ P+    L  
Sbjct: 307 LDGISILKIACGHWHTAIISS---AGQLFAYGDGTFGVLG-HGDTL-TVARPKQVESLKG 361

Query: 235 IEIVGISANGDRSAAL----------SAEGHLYTWG---RGFNSTSDVN------CPQSL 275
           +    I+     +AA+          +  G L+TWG   RG    +D        C + L
Sbjct: 362 VRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL 421

Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
            +   F+Q +      +VLT  G V  +G   HG L +P     +   S+ L +   L  
Sbjct: 422 -NDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP----LSEDTSICLIE-GPLKT 475

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
             V +I++G+ H AV+T                           N  + TWG G  GQLG
Sbjct: 476 EFVREISSGSSHIAVLT--------------------------MNGKVFTWGKGTEGQLG 509

Query: 396 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           LG+  D+ +P +V   ++ Q       + CG  FT AI  H
Sbjct: 510 LGDYVDRSYPTLVEALEDKQVHS----IACGFNFTMAICLH 546



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 142/313 (45%), Gaps = 28/313 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+SWG    G+LG         P+++   + + V  +A G  H  A++     I G+++
Sbjct: 223 EVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVS-----ISGELY 277

Query: 95  SWGRGSS--GQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            WG G+   G  G        +P K     DG   +I  I+ G  H+  +S +G LF  G
Sbjct: 278 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDG--ISILKIACGHWHTAIISSAGQLFAYG 335

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
           DGTFG LGHGD  + + P +V S        IACG  H+  +++       +    +++ 
Sbjct: 336 DGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 395

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
           +G   RG+LG +  +++ V  P     L+D +   +S    ++  L+  G ++T      
Sbjct: 396 WGDADRGKLGHADKKMKLV--PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEH 453

Query: 260 GRGFNSTSDVN--CPQSLPSSLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           GR  N  S+    C    P    F  + + G +H+ VLT +G+V   G    G L   + 
Sbjct: 454 GRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDY 513

Query: 317 VSSTRPLSV-ALE 328
           V  + P  V ALE
Sbjct: 514 VDRSYPTLVEALE 526



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG    G+LG      +L P  +   +    + ++C  A  + LT     I G VF
Sbjct: 392 KLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLT-----ITGVVF 446

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTCGD 152
           + G    G+LG+    D      +   +G   T  +  IS+G +H   ++ +G +FT G 
Sbjct: 447 TIGSKEHGRLGNPLSEDT----SICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 502

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           GT GQLG GDY   S P  V +  +K VH IACG   ++ +
Sbjct: 503 GTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 43/283 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQV 202
           +F  G+     L HGD     + V +   +N     +V  +ACG +H+ ++ K     +V
Sbjct: 170 IFVWGEVPGNVLDHGDV--SKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQ---GEV 224

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G    G+LG  K  + SVS P++   L    +  I+     + A+S  G LY WG G
Sbjct: 225 FSWGVDNGGRLG-HKVSV-SVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEG 282

Query: 263 FNST----SDVNCPQSLPSSL-------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +            Q  P  L       S  + A G  H  +++  G++   G    G+L
Sbjct: 283 THCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVL 342

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
              + ++  RP     ++V +L GV+   IA G  H+A +  +   V+    S  P    
Sbjct: 343 GHGDTLTVARP-----KQVESLKGVRAKAIACGPWHTAAIVERMGTVK----SNAP---- 389

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                   +  + TWG  + G+LG  +   ++ P  V   ++F
Sbjct: 390 --------SGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF 424


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 119/234 (50%), Gaps = 19/234 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
           KV++ G  T+G+LG G +     P    +++LSS  V  +A   GG H  ALT     + 
Sbjct: 479 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 532

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           GKVFSWG G  G+LGH   ++   P+ +      R  I  I+ G +HS  ++ SG L+T 
Sbjct: 533 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 590

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
           G G +G+LGHGD  +   P  V   +   V Q+ACG R   +L L  + L   V+ +G G
Sbjct: 591 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 647

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
             G+LG  +      ++PQ    L+   +  I      S AL+  G ++TWG+G
Sbjct: 648 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 118/283 (41%), Gaps = 31/283 (10%)

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           ++ I  KVF WG     QLG  +      P            +  ++ G      V+  G
Sbjct: 421 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 478

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            ++ CG+ T G+LG G   S + P+      +SS+V K V  +  G RH+  L  D    
Sbjct: 479 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 533

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +V+ +G G  G+LG    R+ +   P++   L    I  I+     SAAL++ G LYTWG
Sbjct: 534 KVFSWGEGDDGKLG-HFSRM-NCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 591

Query: 261 RGF-------NSTSDVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLGGSHHG 309
            G        ++T+ +  P+ +   L     Q A G      L LT +G V   G    G
Sbjct: 592 LGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 650

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            L          P     + +  L+G  V QI  GA+ S  +T
Sbjct: 651 KLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALT 688



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 123/284 (43%), Gaps = 55/284 (19%)

Query: 168 SPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
           S +KV SF       NV Q+A G +    L    +  +VY  G    G+LG+    I S 
Sbjct: 445 SKIKVPSFSETLSALNVVQVAGGSKS---LFAVTVEGKVYACGEATNGRLGLG---ISSG 498

Query: 224 SLP---QVT-IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNC--PQ 273
           ++P   Q+T +  + ++ V + + G  + AL+ +G +++WG G +      S +NC  P+
Sbjct: 499 TVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 558

Query: 274 SLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
            + +  +      A G +H   LT  GE+   G   +G L   +  +  +P  V +    
Sbjct: 559 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV---- 614

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L G +VIQ+A G+  +  +                         + +   + +WG G+ 
Sbjct: 615 -LLGHRVIQVACGSRDAQTLA------------------------LTDEGLVFSWGDGDF 649

Query: 392 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           G+LG G +     P+ +    E  N     ++ CG+ F+ A+++
Sbjct: 650 GKLGRGGSEGCNIPQNI----ERLNGQGVCQIECGAQFSLALTK 689



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 52/240 (21%)

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +V+ +G   + QLG  K     + +P  +  L  + +V ++       A++ EG +Y  G
Sbjct: 427 KVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 484

Query: 261 RGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
              N       S+  V  P+ +   SS    + A+  G  H   LT DG+V   G    G
Sbjct: 485 EATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 544

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L    R++  +P       +  L   ++  IA G+ HSA +T                 
Sbjct: 545 KLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALT----------------- 582

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 427
                     +  + TWG GE+G+LG G+   Q+ PK+V   LG         ++V CGS
Sbjct: 583 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 627


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 112/233 (48%), Gaps = 21/233 (9%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            V++WG    GQLG G +++   P+L+   +  +V  L+CG  H LALT       G+VF+
Sbjct: 897  VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLALTEK-----GQVFA 951

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG G  GQLG G + D   P  V         I  I+AG  HS  +SD G +F+ G G F
Sbjct: 952  WGWGVHGQLGLGNIDDQRLPVCVNHLKDQ--VIKDIAAGHGHSLVLSDKGQIFSFGSGVF 1009

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNV-------HQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            GQLG G+    S PV +     K +       H I+CG  HS +L    +   VY +G  
Sbjct: 1010 GQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLT---VSGGVYTWGRS 1066

Query: 209  KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWG 260
              GQLG      + V+ P   I  +  +   IS   + +AA   + G ++ WG
Sbjct: 1067 LDGQLGNGGH--KEVTAP-TQINENTFKADCISCGCEFTAAQEKQTGKIFCWG 1116



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 114/240 (47%), Gaps = 25/240 (10%)

Query: 36   VWSWGAGTDGQLGTG---RLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
            +++WG    G LG G     H   SP  LLN   L  V  +ACG  H  ALT+       
Sbjct: 843  IYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLE-VLYVACGKNHTTALTN------N 895

Query: 92   KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
             V++WG    GQLG G++ ++ YP+ +T        +  +S G  H+  +++ G +F  G
Sbjct: 896  GVYAWGCSKYGQLGLGDVYESPYPRLITSLANEN--VITLSCGQFHTLALTEKGQVFAWG 953

Query: 152  DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             G  GQLG G+      PV V+   ++ +  IA G  HSLVL       Q++ FGSG  G
Sbjct: 954  WGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDK---GQIFSFGSGVFG 1010

Query: 212  QLGVSKDRIRSVSLPQVTIGLHDIEIV-------GISANGDRSAALSAEGHLYTWGRGFN 264
            QLG       SV  P +  G+ +  I+        IS     SA L+  G +YTWGR  +
Sbjct: 1011 QLGTGNTTKSSV--PVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLD 1068



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 136/308 (44%), Gaps = 38/308 (12%)

Query: 70   SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTI 128
            S+L CG  H       + +  G +++WG+   G LG G  M     P P++  +  +  +
Sbjct: 826  SVLNCGYGHT------ALIRNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEV 879

Query: 129  THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
             +++ G NH+  ++++G ++  G   +GQLG GD      P  ++S  N+NV  ++CG  
Sbjct: 880  LYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQF 938

Query: 189  HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
            H+L L +     QV+ +G G  GQLG+    I    LP     L D  I  I+A    S 
Sbjct: 939  HTLALTEK---GQVFAWGWGVHGQLGLG--NIDDQRLPVCVNHLKDQVIKDIAAGHGHSL 993

Query: 249  ALSAEGHLYTWGRG-FNSTSDVNCPQS--------------LPSSLSFSQAALGWNHVLV 293
             LS +G ++++G G F      N  +S              L ++  F   + G +H  +
Sbjct: 994  VLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSAL 1053

Query: 294  LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV--- 350
            LT  G V   G S  G L +      T P  +      N +  K   I+ G E +A    
Sbjct: 1054 LTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQI------NENTFKADCISCGCEFTAAQEK 1107

Query: 351  VTGK-FHW 357
             TGK F W
Sbjct: 1108 QTGKIFCW 1115



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 30/203 (14%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +V++WG G  GQLG G + D+  P  +N      +  +A G  H L L+       G++F
Sbjct: 948  QVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDK-----GQIF 1002

Query: 95   SWGRGSSGQLGHGEMVDALYP--------KPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
            S+G G  GQLG G    +  P        K +    G+ ++   IS G +HS  ++ SG 
Sbjct: 1003 SFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHS---ISCGCHHSALLTVSGG 1059

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ---IACGMRHSLVLLKDCLGNQVY 203
            ++T G    GQLG+G ++  ++P +    +N+N  +   I+CG   +    K     +++
Sbjct: 1060 VYTWGRSLDGQLGNGGHKEVTAPTQ----INENTFKADCISCGCEFTAAQEKQ--TGKIF 1113

Query: 204  GFGSGKRGQLGVSKDRIRSVSLP 226
             +GS   GQ+     R+ ++++P
Sbjct: 1114 CWGSNSVGQV-----RVTNLAIP 1131



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 129/321 (40%), Gaps = 55/321 (17%)

Query: 131  ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HS--SPVKVSSFVNKNVHQIACGM 187
            ++ G+ H+  + + G ++T G    G LG G   S HS  SP+ + +     V  +ACG 
Sbjct: 828  LNCGYGHTALIRN-GTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVACGK 886

Query: 188  RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
             H+  L      N VY +G  K GQLG+    +     P++   L +  ++ +S     +
Sbjct: 887  NHTTALT----NNGVYAWGCSKYGQLGLGD--VYESPYPRLITSLANENVITLSCGQFHT 940

Query: 248  AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLT 295
             AL+ +G ++ WG       G  +  D    Q LP  ++          A G  H LVL+
Sbjct: 941  LALTEKGQVFAWGWGVHGQLGLGNIDD----QRLPVCVNHLKDQVIKDIAAGHGHSLVLS 996

Query: 296  GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
              G++   G    G L       S+ P  V ++ +S     K+I IA G  HS  ++   
Sbjct: 997  DKGQIFSFGSGVFGQLGTGNTTKSSVP--VLIQGISE----KIILIATGYFHS--ISCGC 1048

Query: 356  HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
            H   L  +S                  + TWG    GQLG G   +   P  +N     +
Sbjct: 1049 HHSALLTVS----------------GGVYTWGRSLDGQLGNGGHKEVTAPTQIN-----E 1087

Query: 416  NRDTQLEVFCGSGFTYAISRH 436
            N      + CG  FT A  + 
Sbjct: 1088 NTFKADCISCGCEFTAAQEKQ 1108


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNIACGQMCSMAVVDTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    Q+Y +G+   GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 312



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 24/273 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSG 145
           + +  ++F  G   SG LG G++   + P+ +    G +  I  +S G   H    +  G
Sbjct: 37  TTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDG 94

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ 
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFA 151

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
           +G    GQ+G      + +   +VT  L +  ++ I+     S A+   G +Y WG    
Sbjct: 152 WGYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN 210

Query: 262 -----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
                G +      C  +    +   + A G+ H LVLT +G++   G + +G L    +
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 270

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
            + + P  V +EK       ++I+IAA   HSA
Sbjct: 271 SNQSYPTPVVVEK------DRIIEIAAC--HSA 295



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 43  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 100

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 101 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 160 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 219

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 220 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 249

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   I  WG   +GQLG GN  +Q +P  V
Sbjct: 250 -DEGQIYAWGANSYGQLGTGNKSNQSYPTPV 279


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNIACGQMCSMAVVDTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    Q+Y +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 336



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 44/316 (13%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G   SG 
Sbjct: 18  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGC 77

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
           LG G++   + P+ +    G +  I  +S G   H    +  G +FT G   + QLG+G 
Sbjct: 78  LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135

Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                 P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G      +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 192

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
            +   +VT  L +  ++ I+     S A+   G +Y WG         G +      C  
Sbjct: 193 PIP-RRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251

Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
           +    +   + A G+ H LVLT +G++   G + +G L    + + + P  V +EK    
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 307

Query: 334 DGVKVIQIAAGAEHSA 349
              ++I+IAA   HSA
Sbjct: 308 --DRIIEIAAC--HSA 319



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   I  WG   +GQLG GN  +Q +P  V
Sbjct: 274 -DEGQIYAWGANSYGQLGTGNKSNQSYPTPV 303


>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
          Length = 439

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 147/346 (42%), Gaps = 45/346 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+ + S   +   ACG  H LALT       G VF
Sbjct: 86  KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET-----GSVF 140

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 141 AFGENKMGQLGLGNQTDAIPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 198

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 199 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHT 258

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 259 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGAAQIYAGYTCS 312

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 313 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPS 372

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   +    +   S A ++V  LDG+   Q+A G  HS V+
Sbjct: 373 PTFGELGYGDHKPKS---STAAQEVKTLDGIYTEQVAMGYSHSLVI 415



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 149/364 (40%), Gaps = 63/364 (17%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AH L +T+      GK++SWGR   GQLGHG+      PK +      +  I   + G N
Sbjct: 76  AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLS--KEVIVSAACGRN 128

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           H+  ++++G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++  
Sbjct: 129 HTLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQI-MYNGQPITKMACGAEFSMIM-- 185

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E  
Sbjct: 186 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 233

Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                     T D    Q LP  ++     A G NH LVL     V   G   +G L   
Sbjct: 234 ---------KTKD---GQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHA 281

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
           E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P 
Sbjct: 282 EQKDEMVP---RLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 338

Query: 372 FFIN----------------VIAENRAIMTWGWG-EHGQLGLGNTCDQIHPKVVNLGDEF 414
              +                ++A + + ++WG     G+LG G+      PK      E 
Sbjct: 339 AVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 394

Query: 415 QNRD 418
           +  D
Sbjct: 395 KTLD 398



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  +     + +   ACG  H+L L + 
Sbjct: 77  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 136

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  ++  P   I  +   I  ++   + S  +  +G+L
Sbjct: 137 ---GSVFAFGENKMGQLGLG-NQTDAIPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 191

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+            LG N       DG+ +        +  D E 
Sbjct: 192 YSFG----------CPE---------YGQLGHNS------DGKFI---ARAQRIEYDCEL 223

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A G  H+ V+  +                 
Sbjct: 224 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQ----------------- 264

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 265 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAA-QIYAGYTCSF 313

Query: 432 AIS 434
           A+S
Sbjct: 314 AVS 316



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 69/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 248 VRDVACGTNHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 302

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
             I AG+  S  VS+ G LF                              CG        
Sbjct: 303 AQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAA 362

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 363 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARD 418


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 25/250 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG+ ++GQLG       + +P+++   +   V  +ACG +H +ALT+      G++
Sbjct: 104 EVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNV-----GEI 158

Query: 94  FSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + WG  S GQLG G        P  V    G    I+HIS G + S  V+ SG ++  G 
Sbjct: 159 YCWGSNSHGQLGLGSSGTPETKPCLVKLLQG--IPISHISCGADFSFAVTPSGAVYGWGK 216

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            +FGQLG GD      P ++ S   + V  I CGM H+  L +D     V+ FG+G  GQ
Sbjct: 217 NSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRD---GGVFTFGAGMYGQ 273

Query: 213 LG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWG------RGF 263
           LG   S + +    LP+  + L    +  I      + A + ++G +Y +G       G 
Sbjct: 274 LGHCTSANEM----LPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGT 329

Query: 264 NSTSDVNCPQ 273
            ST++VN PQ
Sbjct: 330 KSTANVNSPQ 339



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 99/198 (50%), Gaps = 12/198 (6%)

Query: 35  KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++ WG+ + GQLG G     E  P L+ L     +S ++CG     A+T PS    G V
Sbjct: 157 EIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVT-PS----GAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WG+ S GQLG G+  D   P+P          +T+I  G +H+  ++  G +FT G G
Sbjct: 212 YGWGKNSFGQLGLGDTTDR--PQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLGH    +   P KV   +   V QI CG  H+L  +      ++Y FG G  GQL
Sbjct: 270 MYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPS--KGRIYAFGLGGSGQL 327

Query: 214 GVSKDRIRSVSLPQVTIG 231
           G       +V+ PQ+ IG
Sbjct: 328 GTKS--TANVNSPQLVIG 343



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 148/362 (40%), Gaps = 54/362 (14%)

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
           SP+    + +  +  + CG  H + +        GK+FS+G    GQLGH         +
Sbjct: 24  SPRASPFTLVDDIVQVGCGENHTILVMK-----DGKLFSFGLNDYGQLGHCR--SRTRAE 76

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HSSPVKVSSF 175
           PV   + H   IT ++ G  H+   ++ G +F  G  + GQLG     S   +P  V S 
Sbjct: 77  PVDGLEAH--NITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSL 134

Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
             K V QIACG  HS+ L       ++Y +GS   GQLG+          P +   L  I
Sbjct: 135 ATKQVVQIACGRSHSMALTN---VGEIYCWGSNSHGQLGLGSSGTPETK-PCLVKLLQGI 190

Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAAL--- 286
            I  IS   D S A++  G +Y WG+      G   T+D   P  L  SL F +      
Sbjct: 191 PISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQL-KSLRFQRVTYIRC 249

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
           G +H   LT DG V   G   +G L      +   P      KV  L G  V QI  G  
Sbjct: 250 GMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLP-----RKVLELMGTTVTQICCGRC 304

Query: 347 HSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK 406
           H+              +++ P          ++ R I  +G G  GQLG  +T +   P+
Sbjct: 305 HT--------------LAFVP----------SKGR-IYAFGLGGSGQLGTKSTANVNSPQ 339

Query: 407 VV 408
           +V
Sbjct: 340 LV 341



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 135/329 (41%), Gaps = 54/329 (16%)

Query: 93  VFSWGR----GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
           +F WGR             E++ +    P T  D     I  +  G NH+  V   G LF
Sbjct: 1   MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDD----IVQVGCGENHTILVMKDGKLF 56

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           + G   +GQLGH   R+ + P  V      N+ Q+ACG +H+L   ++  G +V+ +GS 
Sbjct: 57  SFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGAQHTLA--QNEWG-EVFAWGSN 111

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
             GQLG++ +    +  P++   L   ++V I+     S AL+  G +Y WG        
Sbjct: 112 SNGQLGLNVEE-SMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLG 170

Query: 262 -GFNSTSDVN-CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
            G + T +   C   L   +  S  + G +    +T  G V   G +  G L   +    
Sbjct: 171 LGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDR 230

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
            +P      ++ +L   +V  I  G +H+A +T                           
Sbjct: 231 PQP-----TQLKSLRFQRVTYIRCGMDHTAALT--------------------------R 259

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           +  + T+G G +GQLG   + +++ P+ V
Sbjct: 260 DGGVFTFGAGMYGQLGHCTSANEMLPRKV 288


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V+ +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSN-KQVTEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V ++G ++  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVNTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++S+     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI         SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPAPVVVEKDRIIEIAACHL-AHTSAAKTQGGHVYMWGQ 312



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 153 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  S    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 272 NQSYPAPVVVEK------DRIIEIAA 291


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V+ +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSN-KQVTEVACGSYHSLVLTSD-----GE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V ++G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVNTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++S+     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI         SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPAPVVVEKDRIIEIAACHL-AHTSAAKTQGGHVYMWGQ 336



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 61  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 177 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 235

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  S    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 296 NQSYPAPVVVEK------DRIIEIAA 315


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 128 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 181

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNIACGQMCSMAVVDTGEVYVWGY 240

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    Q+Y +G+   GQ
Sbjct: 241 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 297

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 298 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 345



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 44/316 (13%)

Query: 64  SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
           ++LSS+ ML  G   + +L S                      + +  ++F  G   SG 
Sbjct: 27  ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGC 86

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
           LG G++   + P+ +    G +  I  +S G   H    +  G +FT G   + QLG+G 
Sbjct: 87  LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 144

Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                 P  +S+   NK V ++ACG  HSLVL  D    +V+ +G    GQ+G      +
Sbjct: 145 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 201

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
            +   +VT  L +  ++ I+     S A+   G +Y WG         G +      C  
Sbjct: 202 PIP-RRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 260

Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
           +    +   + A G+ H LVLT +G++   G + +G L    + + + P  V +EK    
Sbjct: 261 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 316

Query: 334 DGVKVIQIAAGAEHSA 349
              ++I+IAA   HSA
Sbjct: 317 --DRIIEIAAC--HSA 328



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 76  IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 133

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + +++ ++     S  L+++G ++ WG      
Sbjct: 134 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 192

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 193 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 252

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 253 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 282

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   I  WG   +GQLG GN  +Q +P  V
Sbjct: 283 -DEGQIYAWGANSYGQLGTGNKSNQSYPTPV 312


>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
          Length = 483

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 149/348 (42%), Gaps = 49/348 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+ + S   +   ACG  H LALT       G VF
Sbjct: 130 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET-----GSVF 184

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 185 AFGENKMGQLGLGNQTDAIPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 242

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 243 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHT 302

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 303 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGAAQIYAGYTCS 356

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 357 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPS 416

Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   D +  SST     A ++V  LDG+   Q+A G  HS V+
Sbjct: 417 PTFGELGYGDHKPKSST-----AAQEVKTLDGIYTEQVAMGYSHSLVI 459



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 149/364 (40%), Gaps = 63/364 (17%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AH L +T+      GK++SWGR   GQLGHG+      PK +      +  I   + G N
Sbjct: 120 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLS--KEVIVSAACGRN 172

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           H+  ++++G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++  
Sbjct: 173 HTLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQI-MYNGQPITKMACGAEFSMIM-- 229

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E  
Sbjct: 230 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 277

Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                     T D    Q LP  ++     A G NH LVL     V   G   +G L   
Sbjct: 278 ---------KTKD---GQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHA 325

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
           E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P 
Sbjct: 326 EQKDEMVP---RLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 382

Query: 372 FFIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDEF 414
              +                ++A + + ++WG     G+LG G+      PK      E 
Sbjct: 383 AVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 438

Query: 415 QNRD 418
           +  D
Sbjct: 439 KTLD 442



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  +     + +   ACG  H+L L + 
Sbjct: 121 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 180

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  ++  P   I  +   I  ++   + S  +  +G+L
Sbjct: 181 ---GSVFAFGENKMGQLGLG-NQTDAIPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 235

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+       + Q  LG N       DG+ +        +  D E 
Sbjct: 236 YSFG----------CPE-------YGQ--LGHNS------DGKFI---ARAQRIEYDCEL 267

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A G  H+ V+  +                 
Sbjct: 268 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQ----------------- 308

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 309 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAA-QIYAGYTCSF 357

Query: 432 AIS 434
           A+S
Sbjct: 358 AVS 360



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 69/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 292 VRDVACGTNHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 346

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
             I AG+  S  VS+ G LF                              CG        
Sbjct: 347 AQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAA 406

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 407 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARD 462


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + S+V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGENHTALIT 311



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++T  G +   G   HG L
Sbjct: 282 ETSEPKVIENI-RDQTISYISCGENHTALITDIGLMYTFGDGRHGKL 327



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT  +      
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTENA------ 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F+   V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 62/232 (26%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT        ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGV 215
                                   C  N          +Y FG G+ G+LG+
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329


>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
 gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
          Length = 338

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 154/330 (46%), Gaps = 35/330 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WGA ++ QLG G   D  SP  + + +L SV  ++ GGA   A+ S      G  ++
Sbjct: 1   MWAWGANSNAQLGDGTKTDRYSP--IPVKNLDSVIGISAGGAASFAVRSD-----GTAWA 53

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G   D L P  V       +++  + AG +HS  V   G ++  G  T+
Sbjct: 54  WGSNLFGQLGDGTTYDRLTPVQVQGL----HSVVALEAGSSHSLAVKADGSVWAWGWNTY 109

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S S+PV+V      +V  +A G  HSL +  D     V+ +G+   GQLG 
Sbjct: 110 GQLGDGTTDSRSTPVQVEGL--DSVVAVAAGSGHSLAVKAD---GSVWAWGANWSGQLG- 163

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSD 268
                   ++P    GL    +V +SA    S+AL ++G ++ WG   +       + S+
Sbjct: 164 -DGTYTESTVPVQVTGLG--SVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASN 220

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +    S +  + G ++ L L  DG V   G +  G L +    SS+ P+     
Sbjct: 221 SPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPV----- 275

Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTGKFHW 357
           +V+ L    V+ +AAG  H  AV +G   W
Sbjct: 276 QVTRLG--SVVSVAAGPLHGLAVQSGGTVW 303



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 120/326 (36%), Gaps = 52/326 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +++WG  S+ QLG G   D   P PV   D    ++  ISAG   S  V   G  +  G 
Sbjct: 1   MWAWGANSNAQLGDGTKTDRYSPIPVKNLD----SVIGISAGGAASFAVRSDGTAWAWGS 56

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             FGQLG G      +PV+V      +V  +  G  HSL +  D     V+ +G    GQ
Sbjct: 57  NLFGQLGDGTTYDRLTPVQVQGL--HSVVALEAGSSHSLAVKAD---GSVWAWGWNTYGQ 111

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
           LG      RS   P    GL    +V ++A    S A+ A+G ++ WG  ++      + 
Sbjct: 112 LGDGTTDSRST--PVQVEGLD--SVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTY 167

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           ++   P  +    S    + G      L  DG V   G +  G L   E  +S  P  V 
Sbjct: 168 TESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGS-ETAASNSPSPVQ 226

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
                                   VTG          +        +   +  +  +  W
Sbjct: 227 ------------------------VTG-------MASAAAISSGSDYSLALKNDGTVWAW 255

Query: 387 GWGEHGQLGLGNTCDQIHP-KVVNLG 411
           G+   GQLG G T     P +V  LG
Sbjct: 256 GYNSSGQLGNGTTTSSSAPVQVTRLG 281



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 10/123 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WGA   GQLG+       SP  + ++ ++S + ++ G  + LAL +      G V++
Sbjct: 201 VWAWGANDSGQLGS-ETAASNSPSPVQVTGMASAAAISSGSDYSLALKND-----GTVWA 254

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  SSGQLG+G    +  P  VT       ++  ++AG  H   V   G ++  G+ T+
Sbjct: 255 WGYNSSGQLGNGTTTSSSAPVQVTRLG----SVVSVAAGPLHGLAVQSGGTVWDWGNNTY 310

Query: 156 GQL 158
           GQL
Sbjct: 311 GQL 313


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 113/234 (48%), Gaps = 15/234 (6%)

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           + V G  V SWGRG  GQLGHG+  D L P  ++ FDG    I  ++ G +++   S SG
Sbjct: 118 NQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ--DIVSVTCGADYTVARSKSG 175

Query: 146 C-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
             +++ G G FG+LGHGD      P  + +     + QI+CG  H L +    + N+V  
Sbjct: 176 KDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAV---TMENKVLS 232

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---- 260
           +G  + G+LG+   +   V  PQ  +    I I  ++A  + S A++ +G LY WG    
Sbjct: 233 WGRNQNGELGLGTTKDSHV--PQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRY 290

Query: 261 --RGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
              G   T+D   P+ +          + GW H + ++  G +   G S +G L
Sbjct: 291 GNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQL 344



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 119/256 (46%), Gaps = 16/256 (6%)

Query: 7   EETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL 66
           EE  K  S ++N         + +     V SWG G DGQLG G   D L P  L+    
Sbjct: 96  EEPVKVHSGMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDG 155

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
             +  + CG  + +A     S  G  V+SWG G  G+LGHG+  D   P P+    G R 
Sbjct: 156 QDIVSVTCGADYTVA----RSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLR- 210

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
            I  IS G  H   V+    + + G    G+LG G  +    P K+ +F    +  +A G
Sbjct: 211 -IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAG 269

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             HS+ + +D     +YG+G G+ G LG+  + DR+    +P+  + +   +IV +S   
Sbjct: 270 AEHSVAITED---GDLYGWGWGRYGNLGLGDTNDRL----IPE-KVNIDGDKIVMVSCGW 321

Query: 245 DRSAALSAEGHLYTWG 260
             + ++S+ G LYT G
Sbjct: 322 RHTISISSSGGLYTHG 337



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 8/149 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV SWG   +G+LG G   D   PQ +       + M+A G  H +A+T       G ++
Sbjct: 229 KVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED-----GDLY 283

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG G  G LG G+  D L P+ V   DG +  I  +S GW H+  +S SG L+T G   
Sbjct: 284 GWGWGRYGNLGLGDTNDRLIPEKVNI-DGDK--IVMVSCGWRHTISISSSGGLYTHGWSK 340

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
           +GQLGHGD+     P KV +  +K + Q+
Sbjct: 341 YGQLGHGDFEDCLVPRKVQALSDKLISQV 369



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 122/287 (42%), Gaps = 67/287 (23%)

Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG-----FGSGKRGQLG--VS 216
           +    PVKV S           GM +    L + + NQV G     +G G+ GQLG   +
Sbjct: 93  KEEEEPVKVHS-----------GMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGHGDT 141

Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWG------RGFNSTSDV 269
            DR+    LP         +IV ++   D + A S  G  +Y+WG       G    SD+
Sbjct: 142 DDRL----LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDL 197

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  + +   L   Q + G  H L +T + +VL  G + +G L       S  P     
Sbjct: 198 FIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVP----- 252

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
           +K+   +G+++  +AAGAEHS  +T                          E+  +  WG
Sbjct: 253 QKILAFEGIRIKMVAAGAEHSVAIT--------------------------EDGDLYGWG 286

Query: 388 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           WG +G LGLG+T D++ P+ VN+     + D  + V CG   T +IS
Sbjct: 287 WGRYGNLGLGDTNDRLIPEKVNI-----DGDKIVMVSCGWRHTISIS 328


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 156/378 (41%), Gaps = 62/378 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++W+WG    GQLG G   +   P  +NL+ ++SVS    G  H  AL      + G V+
Sbjct: 419 RLWAWGDNNQGQLGNGTQQNSSLPLPVNLTGITSVS---SGHRHTAALR-----LDGTVW 470

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG    GQLG G   D   P  V    G    +T I+ G  HS  +  +G ++  G   
Sbjct: 471 SWGTNQYGQLGDGTRTDRSTPVQVPGLTG----VTSIATGDYHSLALRSNGTVWGWGFNR 526

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQLG G     + PV+VS     N+  IA G  HSL L  D     V+ FG    GQLG
Sbjct: 527 YGQLGDGTTVDRTQPVQVSGLT--NIVSIAAGGGHSLALRSD---GTVWAFGYNFDGQLG 581

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
            +  R  ++ LP   +GL +  +V ++A    S AL A+G ++ WG       G  +T  
Sbjct: 582 -NGTRTWTI-LPVQAVGLGN--VVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQG 637

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVAL 327
              P  +    + +    G  H L L  DG V   G +  G L +    +   P L V++
Sbjct: 638 SAVPLQVSGLSAITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTPGLVVSM 697

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
              +         I AG  HS  V                            +  +  WG
Sbjct: 698 SNAT--------AIFAGDLHSLAVR--------------------------ADGTLWAWG 723

Query: 388 WGEHGQLGLGNTCDQIHP 405
              HGQLG G+T +   P
Sbjct: 724 LNSHGQLGTGDTVEAWFP 741



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 134/296 (45%), Gaps = 26/296 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VWSWG    GQLG G   D  +P  + +  L+ V+ +A G  H LAL S      G V+ 
Sbjct: 469 VWSWGTNQYGQLGDGTRTDRSTP--VQVPGLTGVTSIATGDYHSLALRS-----NGTVWG 521

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G  VD   P  V+        I  I+AG  HS  +   G ++  G    
Sbjct: 522 WGFNRYGQLGDGTTVDRTQPVQVSGLT----NIVSIAAGGGHSLALRSDGTVWAFGYNFD 577

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G       PV+       NV  +A G  +SL L  D     V+ +G    GQLGV
Sbjct: 578 GQLGNGTRTWTILPVQAVGL--GNVVSLAAGKMYSLALRAD---GTVWAWGYNASGQLGV 632

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVN 270
              +  +V L QV+ GL    I  I+A    S AL ++G ++ WG  F     N TSD  
Sbjct: 633 GTTQGSAVPL-QVS-GLS--AITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNR 688

Query: 271 CPQSLPSSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
               L  S+S + A    + H L +  DG +   G + HG L   + V +  P+ V
Sbjct: 689 LTPGLVVSMSNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQV 744



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 140/319 (43%), Gaps = 35/319 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            W+WG    GQLG G       P L+ L+   +V     G  H LA+ +      G V++
Sbjct: 271 AWAWGYNAFGQLGDGTTVQRTLPVLIGLTETRTV---VAGNYHSLAVRTD-----GAVWA 322

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG     QLG G +  +  P       G       + AG+ HS  +   G  ++ GD  F
Sbjct: 323 WGDNRYRQLGTGNLTSSAVPLHAGMTGG-----VTLVAGFRHSVALGADGTAWSWGDNVF 377

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG   ++   +PV+V+          + G  H+++L  +    +++ +G   +GQLG 
Sbjct: 378 GQLGDTTFQPRMAPVQVTGLALGRADATS-GQLHTVMLGAN---GRLWAWGDNNQGQLGN 433

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
              +  S+ LP    G     I  +S+    +AAL  +G +++WG       G  + +D 
Sbjct: 434 GTQQNSSLPLPVNLTG-----ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDR 488

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
           + P  +P     +  A G  H L L  +G V   G + +G L D   V  T+P+     +
Sbjct: 489 STPVQVPGLTGVTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPV-----Q 543

Query: 330 VSNLDGVKVIQIAAGAEHS 348
           VS L    ++ IAAG  HS
Sbjct: 544 VSGL--TNIVSIAAGGGHS 560



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 170/407 (41%), Gaps = 65/407 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG     QLG+  L    SP  + +  LS +  +  GG+  LAL +      G V++
Sbjct: 171 VWAWGDNRSNQLGSATL--TRSPVPIPVPGLSDIVAVVAGGSSSLALRAD-----GTVWA 223

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G  V    P  V   D     +THISAG  H+  +   G  +  G   F
Sbjct: 224 WGDNRYGQLGDGTTVRRAAPVRVANLD----AVTHISAGAYHALALRADGTAWAWGYNAF 279

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G     + PV +     + V     G  HSL +  D     V+ +G  +  QLG 
Sbjct: 280 GQLGDGTTVQRTLPVLIGLTETRTV---VAGNYHSLAVRTD---GAVWAWGDNRYRQLGT 333

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGIS--ANGDRSAALSAEGHLYTWGRG-FNSTSDVNC- 271
               + S ++P     LH     G++  A    S AL A+G  ++WG   F    D    
Sbjct: 334 GN--LTSSAVP-----LHAGMTGGVTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQ 386

Query: 272 PQSLPS-----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
           P+  P      +L  + A  G  H ++L  +G +   G ++ G L +  + +S+ PL V 
Sbjct: 387 PRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPV- 445

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFFPPFFINVIA 378
                NL G+    +++G  H+A +         G   + +L   + T    P  +  + 
Sbjct: 446 -----NLTGIT--SVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPGLT 498

Query: 379 ENRAIMT--------------WGWG--EHGQLGLGNTCDQIHPKVVN 409
              +I T              WGWG   +GQLG G T D+  P  V+
Sbjct: 499 GVTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVS 545



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 162/384 (42%), Gaps = 69/384 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GKV 93
            WSWG    GQLG       ++P          V+ LA G A   +    + ++G  G++
Sbjct: 369 AWSWGDNVFGQLGDTTFQPRMAP--------VQVTGLALGRADATSGQLHTVMLGANGRL 420

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG  + GQLG+G   ++  P PV         IT +S+G  H+  +   G +++ G  
Sbjct: 421 WAWGDNNQGQLGNGTQQNSSLPLPVNLTG-----ITSVSSGHRHTAALRLDGTVWSWGTN 475

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLG G     S+PV+V       V  IA G  HSL L  +     V+G+G  + GQL
Sbjct: 476 QYGQLGDGTRTDRSTPVQVPGLTG--VTSIATGDYHSLALRSN---GTVWGWGFNRYGQL 530

Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------ 265
           G   + DR + V +  +T       IV I+A G  S AL ++G ++ +G  F+       
Sbjct: 531 GDGTTVDRTQPVQVSGLT------NIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGT 584

Query: 266 -TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
            T  +   Q++      S AA G  + L L  DG V   G +  G L       S  PL 
Sbjct: 585 RTWTILPVQAVGLGNVVSLAA-GKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPL- 642

Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
               +VS L    +  I AG  HS                            +  +  + 
Sbjct: 643 ----QVSGLS--AITSITAGTYHSLA--------------------------LRSDGWVW 670

Query: 385 TWGWGEHGQLGLGNTCDQIHPKVV 408
            WG+   GQLG G + +++ P +V
Sbjct: 671 AWGFNFEGQLGNGTSDNRLTPGLV 694



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 160/397 (40%), Gaps = 42/397 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++WG    GQLG G   D+ +P  + ++ ++S   +A G  + LAL        G V++
Sbjct: 71  VFAWGFNRLGQLGDGTTQDKAAP--VQVAGVASAVSVAAGDQYSLALDE-----NGDVWA 123

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  +SGQLG G +     P+ V+           +++G+ H+  +   G ++  GD   
Sbjct: 124 WGDNASGQLGDGTLTPRAQPRRVSGLT----QGVSLASGFAHAVALRADGTVWAWGDNRS 179

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            QLG         P+ V      ++  +  G   SL L  D     V+ +G  + GQLG 
Sbjct: 180 NQLGSATLTRSPVPIPVPGL--SDIVAVVAGGSSSLALRAD---GTVWAWGDNRYGQLGD 234

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSD-VNCPQ 273
                R+  +    +      +  ISA    + AL A+G  + WG   F    D     +
Sbjct: 235 GTTVRRAAPVRVANLD----AVTHISAGAYHALALRADGTAWAWGYNAFGQLGDGTTVQR 290

Query: 274 SLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           +LP  +  ++      G  H L +  DG V   G + +  L      SS  PL   +   
Sbjct: 291 TLPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGG 350

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT----- 385
             L       +A GA+ +A   G   + +L   ++ P   P  +  +A  RA  T     
Sbjct: 351 VTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLALGRADATSGQLH 410

Query: 386 ----------WGWGEH--GQLGLGNTCDQIHPKVVNL 410
                     W WG++  GQLG G   +   P  VNL
Sbjct: 411 TVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNL 447



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 131/340 (38%), Gaps = 58/340 (17%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           LA G  H LA+ S      G VF+WG    GQLG G   D   P  V        +   +
Sbjct: 55  LAVGQYHSLAVHSE-----GTVFAWGFNRLGQLGDGTTQDKAAPVQVAGV----ASAVSV 105

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           +AG  +S  + ++G ++  GD   GQLG G     + P +VS         +A G  H++
Sbjct: 106 AAGDQYSLALDENGDVWAWGDNASGQLGDGTLTPRAQPRRVSGLTQG--VSLASGFAHAV 163

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            L  D     V+ +G  +  QLG +      V +P    GL D  IV + A G  S AL 
Sbjct: 164 ALRAD---GTVWAWGDNRSNQLGSATLTRSPVPIP--VPGLSD--IVAVVAGGSSSLALR 216

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
           A+G ++ WG       G  +T     P  + +  + +  + G  H L L  DG     G 
Sbjct: 217 ADGTVWAWGDNRYGQLGDGTTVRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWGY 276

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
           +  G L D   V  T P+ + L                  E   VV G +H +       
Sbjct: 277 NAFGQLGDGTTVQRTLPVLIGLT-----------------ETRTVVAGNYHSL------- 312

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                      +  + A+  WG   + QLG GN      P
Sbjct: 313 ----------AVRTDGAVWAWGDNRYRQLGTGNLTSSAVP 342



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 120/294 (40%), Gaps = 48/294 (16%)

Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
           G R     ++ G  HS  V   G +F  G    GQLG G  +  ++PV+V+     +   
Sbjct: 47  GARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGV--ASAVS 104

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           +A G ++SL L ++     V+ +G    GQLG     +   + P+   GL   + V +++
Sbjct: 105 VAAGDQYSLALDEN---GDVWAWGDNASGQLG--DGTLTPRAQPRRVSGL--TQGVSLAS 157

Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
               + AL A+G ++ WG       G  + +    P  +P          G +  L L  
Sbjct: 158 GFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRA 217

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
           DG V   G + +G L D   V    P+     +V+NLD   V  I+AGA H+        
Sbjct: 218 DGTVWAWGDNRYGQLGDGTTVRRAAPV-----RVANLD--AVTHISAGAYHA-------- 262

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                            + + A+  A   WG+   GQLG G T  +  P ++ L
Sbjct: 263 -----------------LALRADGTA-WAWGYNAFGQLGDGTTVQRTLPVLIGL 298


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 164/398 (41%), Gaps = 45/398 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG    GQLG G       P  +  + L+S+S LA G +H LAL        G V++
Sbjct: 481 IWAWGDNRRGQLGIGITATREIP--VQATGLASISALAAGDSHSLALRG-----NGSVWT 533

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G  +D      V         IT ++AG +HS  + + G ++  G   F
Sbjct: 534 WGSNAYGQLGDGTAIDRATAAQVPGL----TDITALAAGNHHSLALRNDGTVWVWGSNDF 589

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S  +PV+VS      +  +  G  HS+ +    L   V+ +G+   GQLG 
Sbjct: 590 GQLGDGTVTSRKTPVQVSGL--SAMRAVEAGPAHSVAV---HLNGTVWVWGNNDFGQLG- 643

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDV- 269
               + S ++P    GL  +  V +      S AL  +G L+ WG        N TS + 
Sbjct: 644 -DGTVTSRAMPVQVSGLTGVTAVAVGVY--HSLALRNDGTLWAWGYNNVGQLGNGTSGIQ 700

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALE 328
           + P  +P        A G  H L L  DG V   G +  G L D      + P  V  L 
Sbjct: 701 STPAQVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLT 760

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE--------- 379
            V  L+      +A  +E S    G     +L   + T    P  ++ + +         
Sbjct: 761 NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNA 820

Query: 380 -------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                  +R +  WG  + GQ+G G     I P  VN+
Sbjct: 821 HALALRTDRTVWAWGGNQRGQIGDGTAS--IMPAPVNV 856



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 161/395 (40%), Gaps = 80/395 (20%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G   D  +P  + +  L+SV  +A   AH LAL S      G V++
Sbjct: 164 VWAWGFNGSGQLGNGTATDRATP--VQVPGLTSVMAVAASEAHSLALRSD-----GTVWA 216

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--------HSGFVSDSGCL 147
           WG    GQLG G       P  V    G    +T ++AG N        HS  +   G +
Sbjct: 217 WGDNGYGQLGDGTKAQRTTPVQVLGLAG----VTALAAGGNGTTVAISAHSLALRSDGTV 272

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           +  GD + GQLG G     ++PV+V      +V  +A G  HSL L  D     V+ +G+
Sbjct: 273 WAWGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDD---GTVWAWGN 327

Query: 208 GKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISA---------NGDRSAALSAEGHL 256
              GQL  G +  R   V +P +T       ++ ++A          GD S AL ++G +
Sbjct: 328 NSSGQLGDGTTTARPTPVQVPGLT------SVIAVAAGGGDDSLGMRGDHSLALKSDGTV 381

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN------HVLVLTGDGEVLMLGGSHHGM 310
           + WG   +       P +  + +  S+   G        H +VL  DG V   G +  G 
Sbjct: 382 WAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 441

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L   E V+  R               K +Q++  A  +A+ TG  H V            
Sbjct: 442 LG--EGVTPVR--------------AKPMQVSGLAAITALATGDGHSV------------ 473

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                 +  +  I  WG    GQLG+G T  +  P
Sbjct: 474 -----AVGSDGGIWAWGDNRRGQLGIGITATREIP 503



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 26/298 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG+   GQLG G +    +P  + +S LS++  +  G AH +A+      + G V+ 
Sbjct: 581 VWVWGSNDFGQLGDGTVTSRKTP--VQVSGLSAMRAVEAGPAHSVAVH-----LNGTVWV 633

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G +     P  V+   G    +T ++ G  HS  + + G L+  G    
Sbjct: 634 WGNNDFGQLGDGTVTSRAMPVQVSGLTG----VTAVAVGVYHSLALRNDGTLWAWGYNNV 689

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G     S+P +V       V  +A G  HSL L  D     V+G+G+   GQLG 
Sbjct: 690 GQLGNGTSGIQSTPAQVPGLTG--VIALAAGNGHSLALRTD---GTVWGWGANSFGQLGD 744

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                RS   P    GL ++  + ++A    + AL +E  ++ WG       G  + +  
Sbjct: 745 GTTTPRST--PTQVPGLTNV--IALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQK 800

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  +      +  A G  H L L  D  V   GG+  G + D        P++V+ 
Sbjct: 801 TTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSF 858



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 161/391 (41%), Gaps = 78/391 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--------AHVLALTSPSS 87
           VW+WG    GQLG G      +P  + +  L+ V+ LA GG        AH LAL S   
Sbjct: 214 VWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAISAHSLALRSD-- 269

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              G V++WG  S+GQLG G   +   P  V        ++T ++AG  HS  + D G +
Sbjct: 270 ---GTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSLALRDDGTV 322

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSF-----VNKNVHQIACGMR--HSLVLLKDCLGN 200
           +  G+ + GQLG G   +  +PV+V        V       + GMR  HSL L  D    
Sbjct: 323 WAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD---G 379

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSA-ALSAEGHLY 257
            V+ +G     Q G      R+  + QV+      E+ G +A   GD  A  L ++G ++
Sbjct: 380 TVWAWGYNLSRQFGDGMPATRTTPV-QVS------ELTGGTALVAGDLHAVVLKSDGTVW 432

Query: 258 TWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            WG       G   T     P  +    + +  A G  H + +  DG +   G +  G L
Sbjct: 433 AWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 492

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                +++TR + V    ++++       +AAG  HS  + G                  
Sbjct: 493 G--IGITATREIPVQATGLASIS-----ALAAGDSHSLALRG------------------ 527

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQ 402
                   N ++ TWG   +GQLG G   D+
Sbjct: 528 --------NGSVWTWGSNAYGQLGDGTAIDR 550



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 136/361 (37%), Gaps = 74/361 (20%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           ++  G H LAL        G V++WG   SGQLG+G   D   P  V        ++  +
Sbjct: 148 VSAAGDHTLALRRD-----GTVWAWGFNGSGQLGNGTATDRATPVQVPGL----TSVMAV 198

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG----- 186
           +A   HS  +   G ++  GD  +GQLG G     ++PV+V       V  +A G     
Sbjct: 199 AASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTT 256

Query: 187 ---MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
                HSL L  D     V+ +G    GQLG      R+   P   +GL    +  ++A 
Sbjct: 257 VAISAHSLALRSD---GTVWAWGDNSAGQLGDGTTTERAT--PVQVLGL--TSVTALAAG 309

Query: 244 GDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG---------W 288
              S AL  +G ++ WG       G  +T+    P  +P   S    A G          
Sbjct: 310 AFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRG 369

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H L L  DG V   G +      D    + T P+     +VS L G            +
Sbjct: 370 DHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPV-----QVSELTG-----------GT 413

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A+V G  H V                 V+  +  +  WG    GQLG G T  +  P  V
Sbjct: 414 ALVAGDLHAV-----------------VLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQV 456

Query: 409 N 409
           +
Sbjct: 457 S 457


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 147/332 (44%), Gaps = 32/332 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLL---NLSSLSSVSMLACGGA-HVLALTSPSSVIGG 91
           V++ G    GQ   G    E  P L     LSS  +V + +  G+ H+ AL +      G
Sbjct: 88  VYTCGYNDSGQCAIGT--TERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHA-----NG 140

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
            +++ G    GQLG G     +    V    G R  +  +   + H+  V D+G L+ CG
Sbjct: 141 NLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKR--VADVGCSYFHTAIVMDNGDLYACG 198

Query: 152 DGTFGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
              +GQLG GD+R+    P  V  F  + V  +ACG  +++  L+D     V  FG    
Sbjct: 199 CNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLRD---GGVVAFGKNDH 255

Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
           GQLG+       VS P ++   L  + +  +S     +A ++ +G +YT+GR      G 
Sbjct: 256 GQLGLDSTS-EPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGL 314

Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
                +  P  + S   +  +Q A G  H LVL+ DG+V   G ++HG L     V    
Sbjct: 315 GHKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLS 374

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           P     + +S L    V ++AAG  HS  + G
Sbjct: 375 P-----QLISTLRNKTVTKVAAGFYHSVCLVG 401



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 164/400 (41%), Gaps = 57/400 (14%)

Query: 25  EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS---SVSMLACGGAHVLA 81
           E E +  +V  V+S+G  T G+L  G   D  +P  ++L + +    V  +ACG      
Sbjct: 22  EGESDVLEVEGVYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAI 81

Query: 82  LTSPSSVIGGKVFSWGRGSSGQ--LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
           L        G V++ G   SGQ  +G  E V  L   P      +R        G  H  
Sbjct: 82  LFE-----DGDVYTCGYNDSGQCAIGTTERVPTLRFSP--GLSSNRTVRIFSGNGSEHLA 134

Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
            +  +G L+T G    GQLG G   +      V     K V  + C   H+ +++ +   
Sbjct: 135 ALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDN--- 191

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
             +Y  G    GQLG+   R   + +P+         ++ ++     + A   +G +  +
Sbjct: 192 GDLYACGCNDYGQLGLGDHRNGEL-VPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAF 250

Query: 260 GR------GFNSTSD-VNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           G+      G +STS+ V+ P  L + L      Q + G++H  V+T DG V   G + +G
Sbjct: 251 GKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYG 310

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L    ++   RP      +V +L  +++ Q+A G  H+ V                   
Sbjct: 311 QLGLGHKMHMARP-----ARVESLARMRITQVACGCYHTLV------------------- 346

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                  ++++  +  +G   HGQLGL  + D + P++++
Sbjct: 347 -------LSDDGKVFPFGRNNHGQLGLETSVDCLSPQLIS 379



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 9/175 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKV 93
           V ++G    GQLG     + +S      + L    V  L+CG  H   +T       G V
Sbjct: 247 VVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTE-----DGAV 301

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +++GR   GQLG G  +    P  V      R  IT ++ G  H+  +SD G +F  G  
Sbjct: 302 YTFGRNDYGQLGLGHKMHMARPARVESL--ARMRITQVACGCYHTLVLSDDGKVFPFGRN 359

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
             GQLG        SP  +S+  NK V ++A G  HS+ L+    G      GSG
Sbjct: 360 NHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLVGPTEGETPPAQGSG 414


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 164/398 (41%), Gaps = 45/398 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG    GQLG G       P  +  + L+S+S LA G +H LAL        G V++
Sbjct: 482 IWAWGDNRRGQLGIGITATREIP--VQATGLASISALAAGDSHSLALRG-----NGSVWT 534

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G  +D      V         IT ++AG +HS  + + G ++  G   F
Sbjct: 535 WGSNAYGQLGDGTAIDRATAAQVPGL----TDITALAAGNHHSLALRNDGTVWVWGSNDF 590

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G   S  +PV+VS      +  +  G  HS+ +    L   V+ +G+   GQLG 
Sbjct: 591 GQLGDGTVTSRKTPVQVSGL--SAMRAVEAGPAHSVAV---HLNGTVWVWGNNDFGQLG- 644

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDV- 269
               + S ++P    GL  +  V +      S AL  +G L+ WG        N TS + 
Sbjct: 645 -DGTVTSRAMPVQVSGLTGVTAVAVGVY--HSLALRNDGTLWAWGYNNVGQLGNGTSGIQ 701

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALE 328
           + P  +P        A G  H L L  DG V   G +  G L D      + P  V  L 
Sbjct: 702 STPAQVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLT 761

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE--------- 379
            V  L+      +A  +E S    G     +L   + T    P  ++ + +         
Sbjct: 762 NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNA 821

Query: 380 -------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                  +R +  WG  + GQ+G G     I P  VN+
Sbjct: 822 HALALRTDRTVWAWGGNQRGQIGDGTAS--IMPAPVNV 857



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 161/395 (40%), Gaps = 80/395 (20%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G   D  +P  + +  L+SV  +A   AH LAL S      G V++
Sbjct: 165 VWAWGFNGSGQLGNGTATDRATP--VQVPGLTSVMAVAASEAHSLALRSD-----GTVWA 217

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--------HSGFVSDSGCL 147
           WG    GQLG G       P  V    G    +T ++AG N        HS  +   G +
Sbjct: 218 WGDNGYGQLGDGTKAQRTTPVQVLGLAG----VTALAAGGNGTTVAISAHSLALRSDGTV 273

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           +  GD + GQLG G     ++PV+V      +V  +A G  HSL L  D     V+ +G+
Sbjct: 274 WAWGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDD---GTVWAWGN 328

Query: 208 GKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISA---------NGDRSAALSAEGHL 256
              GQL  G +  R   V +P +T       ++ ++A          GD S AL ++G +
Sbjct: 329 NSSGQLGDGTTTARPTPVQVPGLT------SVIAVAAGGGDDSLGMRGDHSLALKSDGTV 382

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN------HVLVLTGDGEVLMLGGSHHGM 310
           + WG   +       P +  + +  S+   G        H +VL  DG V   G +  G 
Sbjct: 383 WAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 442

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L   E V+  R               K +Q++  A  +A+ TG  H V            
Sbjct: 443 LG--EGVTPVR--------------AKPMQVSGLAAITALATGDGHSV------------ 474

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                 +  +  I  WG    GQLG+G T  +  P
Sbjct: 475 -----AVGSDGGIWAWGDNRRGQLGIGITATREIP 504



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 26/298 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG+   GQLG G +    +P  + +S LS++  +  G AH +A+      + G V+ 
Sbjct: 582 VWVWGSNDFGQLGDGTVTSRKTP--VQVSGLSAMRAVEAGPAHSVAVH-----LNGTVWV 634

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G +     P  V+   G    +T ++ G  HS  + + G L+  G    
Sbjct: 635 WGNNDFGQLGDGTVTSRAMPVQVSGLTG----VTAVAVGVYHSLALRNDGTLWAWGYNNV 690

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G     S+P +V       V  +A G  HSL L  D     V+G+G+   GQLG 
Sbjct: 691 GQLGNGTSGIQSTPAQVPGLTG--VIALAAGNGHSLALRTD---GTVWGWGANSFGQLGD 745

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                RS   P    GL ++  + ++A    + AL +E  ++ WG       G  + +  
Sbjct: 746 GTTTPRST--PTQVPGLTNV--IALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQK 801

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  +      +  A G  H L L  D  V   GG+  G + D        P++V+ 
Sbjct: 802 TTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSF 859



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 161/391 (41%), Gaps = 78/391 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--------AHVLALTSPSS 87
           VW+WG    GQLG G      +P  + +  L+ V+ LA GG        AH LAL S   
Sbjct: 215 VWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAISAHSLALRSD-- 270

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              G V++WG  S+GQLG G   +   P  V        ++T ++AG  HS  + D G +
Sbjct: 271 ---GTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSLALRDDGTV 323

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSF-----VNKNVHQIACGMR--HSLVLLKDCLGN 200
           +  G+ + GQLG G   +  +PV+V        V       + GMR  HSL L  D    
Sbjct: 324 WAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD---G 380

Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSA-ALSAEGHLY 257
            V+ +G     Q G      R+  + QV+      E+ G +A   GD  A  L ++G ++
Sbjct: 381 TVWAWGYNLSRQFGDGMPATRTTPV-QVS------ELTGGTALVAGDLHAVVLKSDGTVW 433

Query: 258 TWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            WG       G   T     P  +    + +  A G  H + +  DG +   G +  G L
Sbjct: 434 AWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 493

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                +++TR + V    ++++       +AAG  HS  + G                  
Sbjct: 494 G--IGITATREIPVQATGLASIS-----ALAAGDSHSLALRG------------------ 528

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQ 402
                   N ++ TWG   +GQLG G   D+
Sbjct: 529 --------NGSVWTWGSNAYGQLGDGTAIDR 551



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 136/361 (37%), Gaps = 74/361 (20%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           ++  G H LAL        G V++WG   SGQLG+G   D   P  V        ++  +
Sbjct: 149 VSAAGDHTLALRRD-----GTVWAWGFNGSGQLGNGTATDRATPVQVPGL----TSVMAV 199

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG----- 186
           +A   HS  +   G ++  GD  +GQLG G     ++PV+V       V  +A G     
Sbjct: 200 AASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTT 257

Query: 187 ---MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
                HSL L  D     V+ +G    GQLG      R+   P   +GL    +  ++A 
Sbjct: 258 VAISAHSLALRSD---GTVWAWGDNSAGQLGDGTTTERAT--PVQVLGL--TSVTALAAG 310

Query: 244 GDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG---------W 288
              S AL  +G ++ WG       G  +T+    P  +P   S    A G          
Sbjct: 311 AFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRG 370

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           +H L L  DG V   G +      D    + T P+     +VS L G            +
Sbjct: 371 DHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPV-----QVSELTG-----------GT 414

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           A+V G  H V                 V+  +  +  WG    GQLG G T  +  P  V
Sbjct: 415 ALVAGDLHAV-----------------VLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQV 457

Query: 409 N 409
           +
Sbjct: 458 S 458


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 139/313 (44%), Gaps = 48/313 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G  + ++V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAIS 434
            + CG   T  I+
Sbjct: 299 YISCGESHTALIT 311



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +++ G LF  GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVTNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TSD    +++    + S  + G +H  ++T  G +   G   HG L
Sbjct: 282 ETSDPKVIENIRDQ-TISYISCGESHTALITDIGLMYTFGDGRHGKL 327



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG     L +  +PQL++      V  +ACGG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G +H+  ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSDPKVIENI--RDQTISYISCGESHTALITDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +H  P   S+F    V  +ACG  H +V 
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVF 364



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 62/232 (26%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G   +GQLG G   +  +  +++  +S   +  L+ G     ALT       G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG  S GQ+G   + +   P+ VT        ++ IS G+ HS FV+  G L+  G+  
Sbjct: 163 MWGDNSEGQIGLKNVTNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPE 218

Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC--------------- 197
            G+LG  +    +H +P  VS    K V Q+ACG  H++VL ++                
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277

Query: 198 --------------LGNQ--------------------VYGFGSGKRGQLGV 215
                         + +Q                    +Y FG G+ G+LG+
Sbjct: 278 TFLFETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGL 329


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 178/436 (40%), Gaps = 82/436 (18%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSS----VI 89
           K++S+G+  + +LG    +D+L P Q+ +L     +        +   LT   +     I
Sbjct: 48  KLFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTDEQNENDPTI 107

Query: 90  GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
             KV+ WG   SG +    +    Y  P T        +  +  G + +  ++  G +  
Sbjct: 108 SNKVYMWGTNKSGNM---SLPSEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLG 164

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G+  FGQLG GD R+ ++P  V +  N+++  I  G+ HS+ + K      V+G+G   
Sbjct: 165 FGENNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVTK---AGHVFGWGYNV 221

Query: 210 RGQLG---VSKDRIRSVS-------------------------LPQVTIGLHDIEIVGIS 241
            GQ+G   V   R+ S +                         LP +  GL  I+I  + 
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 242 ANGDRSAALSAEGHLYTWGRGFNST----SDVNCPQSLPSSLSFS-------QAALGWNH 290
              D +  LSA G++Y++G     T    S++    + P+ + F+       Q + G +H
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASH 341

Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            L LT  G V   G    G L      S+    S  L K  N + +K++++AAG  HS  
Sbjct: 342 TLFLTSGGNVYSCGWGTEGRLGLGMDTSNRD--SPTLLKYFNQNKIKIVKVAAGGSHSMA 399

Query: 351 VTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                                     + +   + TWG G +G+LG GN  D+  PK +N 
Sbjct: 400 --------------------------LDDQGRVYTWGNGSNGKLGHGNESDENLPKQIN- 432

Query: 411 GDEFQNRDTQLEVFCG 426
              F +    +++F G
Sbjct: 433 ---FFSHSNVIDIFAG 445



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 9/165 (5%)

Query: 36  VWSWGAGTDGQLGTG-RLHDELS-PQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGK 92
           V+S+G+   G LG G  L   ++ P  +  +  +  +  L+ G +H L LTS     GG 
Sbjct: 296 VYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTS-----GGN 350

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+S G G+ G+LG G +  +   P  + +F+ ++  I  ++AG +HS  + D G ++T G
Sbjct: 351 VYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWG 410

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           +G+ G+LGHG+    + P +++ F + NV  I  G+ +SLVL+K+
Sbjct: 411 NGSNGKLGHGNESDENLPKQINFFSHSNVIDIFAGIDNSLVLIKE 455


>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
          Length = 464

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 150/349 (42%), Gaps = 49/349 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+ +    ++ + ACG  H LALT       G V+
Sbjct: 112 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTET-----GSVY 166

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 167 AFGENKMGQLGLGNQTDAVPSPTQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 224

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 225 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 284

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 285 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGAAQIYAGYTCS 338

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 339 FAVSETGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPS 398

Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
              G L   D +  SST     A ++V  LDG+   Q+A G  HS V+ 
Sbjct: 399 PTFGELGYGDHKPKSST-----AAQEVKTLDGIYTEQVAMGYAHSLVIA 442



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 148/364 (40%), Gaps = 63/364 (17%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AH L +T+      GK++SWGR   GQLGHG+      PK +         I   + G N
Sbjct: 102 AHSLLITAE-----GKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSE--AIVLAACGRN 154

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           H+  ++++G ++  G+   GQLG G+      SP ++  +  + + ++ACG   S+++  
Sbjct: 155 HTLALTETGSVYAFGENKMGQLGLGNQTDAVPSPTQI-MYNGQPITKMACGAEFSMIM-- 211

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E  
Sbjct: 212 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 259

Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                     T D    Q LP  ++     A G NH LVL     V   G   +G L   
Sbjct: 260 ---------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 307

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
           E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P 
Sbjct: 308 EQKDEMVP---RLVKLFDFPGRGAAQIYAGYTCSFAVSETGGLFFWGATNTSRESTMYPK 364

Query: 372 FFIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDEF 414
              +                ++A + + ++WG     G+LG G+      PK      E 
Sbjct: 365 AVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 420

Query: 415 QNRD 418
           +  D
Sbjct: 421 KTLD 424



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 70/304 (23%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  +    ++ +   ACG  H+L L + 
Sbjct: 103 HSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTET 162

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGH 255
                VY FG  K GQLG+     ++ ++P  T  +++ + I  ++   + S  +  +G+
Sbjct: 163 ---GSVYAFGENKMGQLGLGN---QTDAVPSPTQIMYNGQPITKMACGAEFSMIMDCKGN 216

Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
           LY++G          CP+       + Q  LG N       DG+ +        +  D E
Sbjct: 217 LYSFG----------CPE-------YGQ--LGHN------SDGKFI---ARAQRIEYDCE 248

Query: 316 RVSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
            V   R +++ +EK  +     +  V V  +A GA H+ V+  +                
Sbjct: 249 LVP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ---------------- 290

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
                     + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   +
Sbjct: 291 ----------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAA-QIYAGYTCS 338

Query: 431 YAIS 434
           +A+S
Sbjct: 339 FAVS 342



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 274 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 328

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
             I AG+  S  VS++G LF                              CG        
Sbjct: 329 AQIYAGYTCSFAVSETGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAA 388

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 389 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYAHSLVIARD 444


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 147/327 (44%), Gaps = 50/327 (15%)

Query: 93  VFSWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           +  WG  S GQLG G + + +   P+   FF G R  +  +  G  H+ F+ D G ++TC
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKR--VCDVGCGLKHTVFLLDDGTVYTC 58

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G    GQLGH   +S   P  V +   + +  ++CG  H+L L       QV+ +G G  
Sbjct: 59  GCNDLGQLGHE--KSRKKPEHVVALDAQIIVAVSCGESHTLALNDK---GQVFSWGLGSN 113

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNST--- 266
           GQLG++      V +P+    L D++I  ++     S ALS  G +++WG+  F      
Sbjct: 114 GQLGLNNFE-ECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLG 172

Query: 267 ---SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
              S ++ PQ + S   + F+Q + G  H   +T  G V   G +  G L   +      
Sbjct: 173 MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWF 232

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P   AL K  +L   +VI ++ G +H+A +T                          + R
Sbjct: 233 P---ALLK--SLRSQRVIFVSCGEDHTAALT--------------------------KLR 261

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            + T+G G +GQLG   T  +I+P+ V
Sbjct: 262 GVFTFGAGGYGQLGHNCTNHEINPRKV 288



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 136/318 (42%), Gaps = 29/318 (9%)

Query: 39  WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG  + GQLG G + +E+   P+         V  + CG  H + L        G V++ 
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLD-----DGTVYTC 58

Query: 97  GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
           G    GQLGH +      P+ V   D     I  +S G +H+  ++D G +F+ G G+ G
Sbjct: 59  GCNDLGQLGHEKSRKK--PEHVVALDAQ--IIVAVSCGESHTLALNDKGQVFSWGLGSNG 114

Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG  ++      P  +    +  + Q+ACG  HS  L K   G QV+ +G  + GQLG+
Sbjct: 115 QLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSK---GGQVFSWGQNQFGQLGL 171

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
                 S+S PQ+   L  I    +SA G  S A++  G ++ WG+      G N T D 
Sbjct: 172 GMHG-SSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDR 230

Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             P  L S  S      + G +H   LT    V   G   +G L          P     
Sbjct: 231 WFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINP----- 285

Query: 328 EKVSNLDGVKVIQIAAGA 345
            KV  L G  V QI+ G+
Sbjct: 286 RKVFELMGNVVTQISCGS 303



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 16/184 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G++GQLG     + +  P+ +   S   ++ +ACG  H  AL+      GG+V
Sbjct: 104 QVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSK-----GGQV 158

Query: 94  FSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           FSWG+   GQLG   HG  +    P+ +    G  +    +SAG  HS  ++ SG +F  
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIST--PQIIQSLQGIPFA--QLSAGGAHSFAITLSGAVFGW 214

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G   FGQLG  D +    P  + S  ++ V  ++CG  H+  L K      V+ FG+G  
Sbjct: 215 GKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTK---LRGVFTFGAGGY 271

Query: 211 GQLG 214
           GQLG
Sbjct: 272 GQLG 275



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V++ G    GQLG  +   +  P+ +       +  ++CG +H LAL        G+VFS
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK--PEHVVALDAQIIVAVSCGESHTLALND-----KGQVFS 107

Query: 96  WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG GS+GQLG     + +  P+ +      +  I  ++ G+ HS  +S  G +F+ G   
Sbjct: 108 WGLGSNGQLGLNNFEECVRVPRNIKCLSDVQ--IAQVACGYWHSHALSKGGQVFSWGQNQ 165

Query: 155 FGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           FGQLG G +  S S+P  + S       Q++ G  HS  +    L   V+G+G  K GQL
Sbjct: 166 FGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAI---TLSGAVFGWGKNKFGQL 222

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G++  + R    P +   L    ++ +S   D +AAL+    ++T+G G
Sbjct: 223 GLNDTKDR--WFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAG 269



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 56/298 (18%)

Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G+ ++GQLG G  D      P K   F  K V  + CG++H++ LL D     VY  G  
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDD---GTVYTCGCN 61

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
             GQLG  K R +    P+  + L    IV +S     + AL+ +G +++WG G N    
Sbjct: 62  DLGQLGHEKSRKK----PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLG 117

Query: 269 VN-------CPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
           +N        P+++   S +  +Q A G+ H   L+  G+V   G +  G L      SS
Sbjct: 118 LNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSS 177

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
                +    + +L G+   Q++AG  HS  +T                           
Sbjct: 178 ISTPQI----IQSLQGIPFAQLSAGGAHSFAIT--------------------------L 207

Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISR 435
           + A+  WG  + GQLGL +T D+  P ++      ++  +Q  +F  CG   T A+++
Sbjct: 208 SGAVFGWGKNKFGQLGLNDTKDRWFPALL------KSLRSQRVIFVSCGEDHTAALTK 259



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 8/153 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     +S PQ++        + L+ GGAH  A+T     + G V
Sbjct: 157 QVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT-----LSGAV 211

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG+   GQLG  +  D  +P  +      R  +  +S G +H+  ++    +FT G G
Sbjct: 212 FGWGKNKFGQLGLNDTKDRWFPALLKSLRSQR--VIFVSCGEDHTAALTKLRGVFTFGAG 269

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
            +GQLGH       +P KV   +   V QI+CG
Sbjct: 270 GYGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 139/314 (44%), Gaps = 42/314 (13%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           K+++WG    G LG       E +P L+   +   +   A G  H LA+        G+ 
Sbjct: 58  KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQ-----GRA 112

Query: 94  FSWGRGSSGQLGH-------GEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           ++WG    GQ G        G  V  D + PK        + T+  ++AG  HS  ++  
Sbjct: 113 YAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA----QQLTVRQVAAGGTHSVVLTRE 168

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G ++T G         GD +  S PV+V     +NV  IA G  H+L L +D     ++ 
Sbjct: 169 GYVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKED---GTLWA 219

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
           +G+ + GQLG    + RS  +P    GL D+ +V I+A G  S AL+ EG +Y WGRG  
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEH 277

Query: 264 -------NSTSDVNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                  N  S    PQ    LP      Q + G  H + LT DG +   G   HG L  
Sbjct: 278 GRLGFGDNDKSSKMLPQKVNLLPGE-DIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336

Query: 314 PERVSSTRPLSVAL 327
             +V++ +PL + +
Sbjct: 337 GRKVTTGQPLELPI 350



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 74/365 (20%)

Query: 93  VFSWGRGSSGQLGHG--------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           V +WG G  GQLG G         +VDAL P          + +  +  G  +S  + D 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEP----------FNVRSVVGGSRNSLAICDD 56

Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           G LFT G    G LGH  + ++ S+P  V S  N  + Q A G  H L +  D  G + Y
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAV--DDQG-RAY 113

Query: 204 GFGSGKRGQLG--VSKDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
            +G  + GQ G   SKD       R + +P+       + +  ++A G  S  L+ EG++
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSVVLTREGYV 171

Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
           +TWG+ +       ++ P  +    +    A+G  H L L  DG +   G + +G L   
Sbjct: 172 WTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG-- 229

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
                T+P S  +  V  LD + ++ IAAG  HS  +T +                    
Sbjct: 230 --TGDTQPRSYPI-PVQGLDDLTLVDIAAGGWHSTALTNEGE------------------ 268

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNL--GDEFQNRDTQLEVFCGSGFT 430
                   +  WG GEHG+LG G+     ++ P+ VNL  G++       ++V CG   +
Sbjct: 269 --------VYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDI------IQVSCGGTHS 314

Query: 431 YAISR 435
            A++R
Sbjct: 315 VALTR 319



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 156/385 (40%), Gaps = 65/385 (16%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG+G DGQLG G   ++    +++     +V  +  G  + LA+        GK+F+WG
Sbjct: 9   AWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICD-----DGKLFTWG 63

Query: 98  RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
               G LGH  E      P  V         I   + G  H   V D G  +  G   +G
Sbjct: 64  WNQRGTLGHPPETKTESTPSLVKSL--ANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYG 121

Query: 157 QLGHGDYRSHS-SPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           Q G    +  +  PV+    + K       V Q+A G  HS+VL ++     V+ +G   
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWTWG--- 175

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
             Q     D I+ +S+P    GL ++ ++ + A    + AL  +G L+ WG    G   T
Sbjct: 176 --QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGT 230

Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            D   P+S P        L+    A G  H   LT +GEV   G   HG L   +   S+
Sbjct: 231 GDTQ-PRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSS 289

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
           + L    +KV+ L G  +IQ++ G  HS  +T                           +
Sbjct: 290 KMLP---QKVNLLPGEDIIQVSCGGTHSVALT--------------------------RD 320

Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHP 405
             I ++G G+HG+LG G       P
Sbjct: 321 GRIFSFGRGDHGRLGYGRKVTTGQP 345



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +W+WG    GQLGTG       P  +  L  L+ V  +A GG H  ALT+      G+V+
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNE-----GEVY 270

Query: 95  SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
            WGRG  G+LG G+      + P+ V    G    I  +S G  HS  ++  G +F+ G 
Sbjct: 271 GWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGE--DIIQVSCGGTHSVALTRDGRIFSFGR 328

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKN----------------VHQIACGMRHSLVLLK 195
           G  G+LG+G   +   P+++   +                      +ACG RH+L +++
Sbjct: 329 GDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 176/469 (37%), Gaps = 120/469 (25%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-------------------VSMLACGG 76
           +++WG G+ G LG G   D  SP  + L S                      V+  A G 
Sbjct: 202 LYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGA 261

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
            H +A TS      G +++WG G +G+LG G    +L P  V +       +  +SAG +
Sbjct: 262 KHSMACTS-----DGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDR--DVVFVSAGDS 314

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  +   G L+T G G FG+LGHGD      P KV  F    V Q+ACG  H+L L   
Sbjct: 315 HSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHK 374

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH--DIE--IVGISANGDRSAALSA 252
                V+ +G+G    L +            VT+  H  DIE  ++ ++A    SAA++ 
Sbjct: 375 ---GTVFAWGAG----LALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTV 427

Query: 253 EGHLYTWGRGFNST----SDVNCP--------------QSLPSSLSFSQ----------- 283
            G L  WG G +S        N P                L S L  S+           
Sbjct: 428 GGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVL 487

Query: 284 ------------------AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
                                G NH + LTG G V + G +  G L   E+V   +   V
Sbjct: 488 GESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPV 547

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
            L+  S      + +IA G++H   V                          A+   +  
Sbjct: 548 KLDCFST----PIRRIACGSKHCLAV--------------------------AQYGDVFA 577

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           WG  + GQLGLG       P  V    +       ++VFCG  ++  I+
Sbjct: 578 WGANDDGQLGLGVLRPSFEPAAVTALRQ------AIDVFCGDDYSACIT 620



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 176/432 (40%), Gaps = 87/432 (20%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ +WG   +  LG G    + + P L+   S   V  ++CG  +   L   +   GGKV
Sbjct: 69  QLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKV 128

Query: 94  FSWGRGSSGQLGHGEMV----------DA----------LYPKPVTFFDGHRYTITHISA 133
           +++G G+ G+LG+ +            DA            PKP       +  I  IS 
Sbjct: 129 YTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISC 188

Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKN------- 179
           G +H+  +SD G L+  G G++G LG GD     SPV+V       S    +N       
Sbjct: 189 GADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRG 248

Query: 180 -----VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
                V   A G +HS+    D     ++ +G G  G+LG+  +R  S+S P V   + D
Sbjct: 249 TDPVVVTCCAAGAKHSMACTSD---GTLWTWGHGGNGRLGLGHNR-GSLS-PAVVDYILD 303

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAAL 286
            ++V +SA    SA +  +G LYTWG       G     ++  P+ +     +   Q A 
Sbjct: 304 RDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVAC 363

Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGA 345
           G  H L LT  G V   G    G+              V + K +S+++ V V+ +AAG 
Sbjct: 364 GTFHTLALTHKGTVFAWGA---GLALGLGEGEDGGGGMVTVPKHLSDIE-VAVLNVAAGP 419

Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
            HSA VT                              ++ WG G   +LG G+  +Q  P
Sbjct: 420 YHSAAVT--------------------------VGGDLLVWGVGGSSRLGHGDQQNQPFP 453

Query: 406 KVVNLGDEFQNR 417
           K V    + +NR
Sbjct: 454 KYVA---DLRNR 462



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 137/347 (39%), Gaps = 78/347 (22%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY- 126
           +V  +A G  H  A+T     +GG +  WG G S +LGHG+  +  +PK V       Y 
Sbjct: 411 AVLNVAAGPYHSAAVT-----VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV 465

Query: 127 ------------------------------------TITHISAGWNHSGFVSDSGCLFTC 150
                                               T+  +  G NH+  ++ +G ++  
Sbjct: 466 ADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVW 525

Query: 151 GDGTFGQLGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G    GQLG G+        PVK+  F +  + +IACG +H L + +      V+ +G+ 
Sbjct: 526 GSNDEGQLGLGEQVEEDQYEPVKLDCF-STPIRRIACGSKHCLAVAQ---YGDVFAWGAN 581

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLH---------DIEIVGISANGDRSAALSAE-----G 254
             GQLG+    +R    P     L          D      S  G ++ +L+ E     G
Sbjct: 582 DDGQLGLGV--LRPSFEPAAVTALRQAIDVFCGDDYSACITSNGGAQTVSLALESGTEFG 639

Query: 255 HLYTWGRGFN---------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            L+TWG   +         ++  +  PQ +P S+     +LG +H L +T  GE    G 
Sbjct: 640 DLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPVCACSLGTSHALAITARGECYAWGA 699

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            ++G L      ++  P      K     GV++  +AAGA HS  ++
Sbjct: 700 GYYGRLGIGTTANAYAPTKCDFPK-----GVRIRSVAAGASHSLALS 741



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 30/290 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG+  +GQLG G   +E   + + L   S+ +  +ACG  H LA+        G VF
Sbjct: 522 VWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSKHCLAVAQ-----YGDVF 576

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVT-------FFDGHRYTITHISAGWNHSGFV-----S 142
           +WG    GQLG G +  +  P  VT        F G  Y+    S G   +  +     +
Sbjct: 577 AWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITSNGGAQTVSLALESGT 636

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           + G L+T G    G+LG G+  +  S +     V  +V   AC +  S  L     G + 
Sbjct: 637 EFGDLWTWGAAESGKLGLGEDVASGS-ILTPQKVPFSVPVCACSLGTSHALAITARG-EC 694

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           Y +G+G  G+LG+      +   P        + I  ++A    S ALS +G L+ WG+ 
Sbjct: 695 YAWGAGYYGRLGIGT--TANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKK 752

Query: 263 FN--STSDVNCPQSL-----PSSL-SFSQAALGWNHVLVLTGDGEVLMLG 304
            +  ST++ N P+       PS +      A   +H L +T  GEV   G
Sbjct: 753 EDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWG 802



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 146/426 (34%), Gaps = 105/426 (24%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +W+WG G +G+LG G     LSP +++      V  ++ G +H   +        G +++
Sbjct: 273 LWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQ-----GVLYT 327

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDG-----------HRYTITH-------------- 130
           WG G  G+LGHG+  +   P+ V  F G           H   +TH              
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387

Query: 131 ---------------------------ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
                                      ++AG  HS  V+  G L   G G   +LGHGD 
Sbjct: 388 LGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447

Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
           ++   P  V+   N+        M     L +D     V G                 S 
Sbjct: 448 QNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLG----------------ESA 491

Query: 224 SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQSL 275
                      ++ +G   N   + AL+  G ++ WG         G     D   P  L
Sbjct: 492 GGAGANAAAWTLQSLGCGEN--HTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKL 549

Query: 276 PS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
              S    + A G  H L +   G+V   G +  G L       S  P +V   +     
Sbjct: 550 DCFSTPIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALR----- 604

Query: 335 GVKVIQIAAGAEHSAVVT--GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHG 392
             + I +  G ++SA +T  G    V L + S T F              + TWG  E G
Sbjct: 605 --QAIDVFCGDDYSACITSNGGAQTVSLALESGTEF------------GDLWTWGAAESG 650

Query: 393 QLGLGN 398
           +LGLG 
Sbjct: 651 KLGLGE 656



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 114/334 (34%), Gaps = 100/334 (29%)

Query: 127 TITHISAGWNHS---GFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQ 182
           ++  ++ G  H+   G   D   L   G      LG G + R    P  V  F    V +
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFE 106

Query: 183 IACGMRHSLVLLKDCL--GNQVYGFGSGKRGQLGVSKDRIRSVSLPQ------------- 227
           ++CG  +S VL+K     G +VY FG G RG+LG  K +    +  Q             
Sbjct: 107 VSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166

Query: 228 ------VTIGLHD-IEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQS 274
                   +   D  +I  IS   D + ALS  G LY WG       G   TSD   P  
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSP-- 224

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
                                    V +L GS  G     E +   R            D
Sbjct: 225 -------------------------VRVLLGSEKGSGKKKENLGIGR---------RGTD 250

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
            V V   AAGA+HS   T                           +  + TWG G +G+L
Sbjct: 251 PVVVTCCAAGAKHSMACTS--------------------------DGTLWTWGHGGNGRL 284

Query: 395 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
           GLG+    + P VV   D   +RD    VF  +G
Sbjct: 285 GLGHNRGSLSPAVV---DYILDRDV---VFVSAG 312



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS-SVSMLAC--GGAHVLALTSPSSVIGGK 92
           +W+WGA   G+LG G   D  S  +L    +  SV + AC  G +H LA+T+      G+
Sbjct: 641 LWTWGAAESGKLGLG--EDVASGSILTPQKVPFSVPVCACSLGTSHALAITA-----RGE 693

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY-------------------------- 126
            ++WG G  G+LG G   +A  P    F  G R                           
Sbjct: 694 CYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKE 753

Query: 127 ------------------------TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD 162
                                    +  I+A  +HS  V+++G +F  GD    Q G G 
Sbjct: 754 DTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGK 813

Query: 163 YRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            ++     P  ++   N     +A G + S  +L  C G +VY  G    G+LG
Sbjct: 814 RQAERLDRPEMIAGLPNV-CQWVATGPQASFFVL--CSG-EVYAAGVINGGRLG 863


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 171/427 (40%), Gaps = 74/427 (17%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +   V +WG+G DGQLG G   ++  P  +      +V+ +  G  + LA+        G
Sbjct: 6   RATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDD-----G 60

Query: 92  KVFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++F+WG    G LGH  E      P PV    G  + I   + G  H   V D G  +  
Sbjct: 61  RLFTWGWNQRGTLGHPPETKTESSPGPVDALAG--FKIVQAAIGGWHCLAVDDKGRAYAW 118

Query: 151 GDGTFGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           G   +GQ G    R            P+     +   V Q+A G  HS+VL ++     V
Sbjct: 119 GGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQE---GHV 175

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
           + +     GQ     D I+ +S P    GL  + ++ + A    + AL+ +  L+ WG  
Sbjct: 176 WTW-----GQPWPPGD-IKQISTPVRVQGLEKVRVIAVGAF--HNLALTEDVILWAWGNN 227

Query: 262 --GFNSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS- 312
             G   T D   P+S P      S LS    A G  H   LT DGEV   G   HG L  
Sbjct: 228 EYGQLGTGDTQ-PRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGF 286

Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             ++ S   PL V L     L G  ++Q++ G  HS                        
Sbjct: 287 GDDKSSHMVPLKVEL-----LAGEDIVQVSCGGTHSV----------------------- 318

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPK--VVNLGDEFQNRDTQLE---VFCGS 427
               +A +  + ++G G+HG+LG G      HP    +NL     +RD + +   V CG 
Sbjct: 319 ---ALARDGRMFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGG 375

Query: 428 GFTYAIS 434
             T AI+
Sbjct: 376 RHTLAIA 382


>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 558

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 158/389 (40%), Gaps = 61/389 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            + +WGA   GQLG G      +P  ++L   ++V+ +A G +H LALTS      G V 
Sbjct: 58  TILAWGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTS-----AGAVL 112

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQLG G  +++    P+T       T+  I+A   HS  ++ +G +   G   
Sbjct: 113 AWGENNFGQLGTGNNLNSSV--PITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGANN 170

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD--CLGNQVYGFGSGKRGQ 212
            GQLG+G+  + ++PV V+      V  IA G  HSL +      L     G G      
Sbjct: 171 VGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAITSTGAALAWGGNGNGQLGNNS 230

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFN 264
              S + I +V+LP  T       I  I+A    S A+++ G    W        G G N
Sbjct: 231 TATSLEPI-AVTLPPST------TITAIAAGSSYSLAITSTGTALAWGGNSNGQLGTGNN 283

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           + S +    +LP   + +  A G+ H L +T  G  L  GG+  G L      +S  P+ 
Sbjct: 284 ADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVI 343

Query: 325 VALEK---VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           V L     ++  DG                 G FH +                       
Sbjct: 344 VNLPPDTTITTNDG-----------------GFFHSLGSM-----------------STG 369

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
           A + WG    GQLG GN  + + P  V L
Sbjct: 370 AALAWGNNFSGQLGTGNNTNSLDPIAVAL 398



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 141/339 (41%), Gaps = 54/339 (15%)

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
           +PS V    + +WG  + GQLG G  +    P  V+       T+T ++ G +HS  ++ 
Sbjct: 50  TPSGVASDTILAWGANNVGQLGDGSTIARNAPVAVSLPP--DTTVTAVAGGDSHSLALTS 107

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +G +   G+  FGQLG G+  + S P+ V+   +  V  IA    HSL L        V 
Sbjct: 108 AGAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALTS---AGAVL 164

Query: 204 GFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +G+   GQLG     + +   +V+LP  T       +  I+A  + S A+++ G    W
Sbjct: 165 AWGANNVGQLGNGNTFNSNTPVTVNLPPGT------TVATIAAGTNHSLAITSTGAALAW 218

Query: 260 GRGF--------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           G            +TS      +LP S + +  A G ++ L +T  G  L  GG+ +G L
Sbjct: 219 GGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQL 278

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                  S  P++VAL       G  +  IAAG  HS  VT                   
Sbjct: 279 GTGNNADSLIPIAVALPP-----GTTITSIAAGFTHSLAVT------------------- 314

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                       + WG    GQLG+G T +   P +VNL
Sbjct: 315 -------STGTALAWGGNSRGQLGIGTTTNSDTPVIVNL 346



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 122/314 (38%), Gaps = 61/314 (19%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WGA   GQLG G   +  +P  +NL   ++V+ +A G  H LA+TS      G   
Sbjct: 162 AVLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAITS-----TGAAL 216

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG   +GQLG+     +L P  VT       TIT I+AG ++S  ++ +G     G  +
Sbjct: 217 AWGGNGNGQLGNNSTATSLEPIAVTLPP--STTITAIAAGSSYSLAITSTGTALAWGGNS 274

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G+      P+ V+      +  IA G  HSL +           +G   RGQLG
Sbjct: 275 NGQLGTGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTST---GTALAWGGNSRGQLG 331

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
           +                                              G  + SD     +
Sbjct: 332 I----------------------------------------------GTTTNSDTPVIVN 345

Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
           LP   + +    G+ H L     G  L  G +  G L      +S  P++VAL       
Sbjct: 346 LPPDTTITTNDGGFFHSLGSMSTGAALAWGNNFSGQLGTGNNTNSLDPIAVALPS----- 400

Query: 335 GVKVIQIAAGAEHS 348
           G K+  IAAG  HS
Sbjct: 401 GTKITTIAAGGGHS 414



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 7/158 (4%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG  ++GQLGTG   D L P  + L   ++++ +A G  H LA+TS      G   +WG
Sbjct: 269 AWGGNSNGQLGTGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTS-----TGTALAWG 323

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             S GQLG G   ++  P  V        TIT    G+ HS     +G     G+   GQ
Sbjct: 324 GNSRGQLGIGTTTNSDTPVIVNLPP--DTTITTNDGGFFHSLGSMSTGAALAWGNNFSGQ 381

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           LG G+  +   P+ V+      +  IA G  HSL L+ 
Sbjct: 382 LGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLALVA 419



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           +WG    GQLGTG   + L P  + L S + ++ +A GG H LAL +P +
Sbjct: 373 AWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLALVAPPT 422


>gi|440793924|gb|ELR15095.1| chromo' (CHRromatin Organization MOdifier) domain containing
           protein [Acanthamoeba castellanii str. Neff]
          Length = 1421

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 11/163 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK-- 92
           K+++WG   DGQLG G   D  +P+L+   +   V+ +ACGG H+L +T     IG K  
Sbjct: 211 KLFTWGVNKDGQLGYGNEEDCSTPRLVRFPARQRVAEIACGGEHMLCIT-----IGDKGT 265

Query: 93  --VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
             ++SWG    GQLG G+      P  V    G    +T I AGWN S   +D G L   
Sbjct: 266 RTLYSWGNNKVGQLGLGDTTARNEPTVVEALRGR--GVTKIGAGWNFSFVTTDEGELLAF 323

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           G+G  GQLG         PV+V+ F  + + QIA G  H+L+L
Sbjct: 324 GEGDSGQLGIAKPCKELKPVRVTRFGKRKMLQIAPGRVHTLLL 366



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 122/320 (38%), Gaps = 90/320 (28%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V + G+G  G LG G       P    +S    VS +A     VLALT      GG V+
Sbjct: 136 EVRAVGSGQMGCLGYGLTKASDVPVEARISE--PVSSIAASEHFVLALTE-----GGNVY 188

Query: 95  SWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG GS  +LGHG+ +   L P        H+                     LFT G  
Sbjct: 189 SWG-GSGARLGHGDDLTVKLVP--------HK---------------------LFTWGVN 218

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL-VLLKDCLGNQVYGFGSGKRGQ 212
             GQLG+G+    S+P  V     + V +IACG  H L + + D     +Y +G+ K GQ
Sbjct: 219 KDGQLGYGNEEDCSTPRLVRFPARQRVAEIACGGEHMLCITIGDKGTRTLYSWGNNKVGQ 278

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LG+     R+   P V   L                           GRG          
Sbjct: 279 LGLGDTTARNE--PTVVEALR--------------------------GRGV--------- 301

Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
                    ++   GWN   V T +GE+L  G    G L   +     +P+     +V+ 
Sbjct: 302 ---------TKIGAGWNFSFVTTDEGELLAFGEGDSGQLGIAKPCKELKPV-----RVTR 347

Query: 333 LDGVKVIQIAAGAEHSAVVT 352
               K++QIA G  H+ ++T
Sbjct: 348 FGKRKMLQIAPGRVHTLLLT 367



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 95/251 (37%), Gaps = 50/251 (19%)

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G  +  QLG+     R  + PQ    L   +   +SA+G+ SAA++  G  Y WG+    
Sbjct: 37  GDNRDAQLGLGD--FRRYAQPQPLQELKGKQPTVVSASGNLSAAITKSGETYIWGKCGRL 94

Query: 262 --GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G       + P   P  S L+    A G   V+ LT DGEV  +G    G L      
Sbjct: 95  FHGGCGDEHRSMPTLHPELSKLNLKSIACGLGFVVGLTEDGEVRAVGSGQMGCLGYGLTK 154

Query: 318 SSTRPLSVAL-EKVSNLDGVKVIQIAAGAEHSAVVTGK----FHW----VRL-----FII 363
           +S  P+   + E VS++         A +EH  +   +    + W     RL       +
Sbjct: 155 ASDVPVEARISEPVSSI---------AASEHFVLALTEGGNVYSWGGSGARLGHGDDLTV 205

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 423
              P               + TWG  + GQLG GN  D   P++V     F  R    E+
Sbjct: 206 KLVPH-------------KLFTWGVNKDGQLGYGNEEDCSTPRLVR----FPARQRVAEI 248

Query: 424 FCGSGFTYAIS 434
            CG      I+
Sbjct: 249 ACGGEHMLCIT 259


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 139/295 (47%), Gaps = 29/295 (9%)

Query: 70  SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
           + ++ G  H LA+ S      G +++WG  SSGQLG+  ++++  P  V+  DG   T T
Sbjct: 52  TQVSAGINHSLAMGSD-----GNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDG--VTFT 104

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV---NKNVHQIACG 186
            +SAG +HS  V   G  +  G  T G+LG+G     S P+ VS+        + Q+  G
Sbjct: 105 QVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAG 164

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANG 244
             HSL +  +     +Y +G  + GQLG       SV L +V+ G     +    +SA  
Sbjct: 165 GFHSLAVGSN---GDIYSWGYNRSGQLGDGTTLASSVPL-KVSAGAVPAGVTFSQVSAGD 220

Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTG 296
             S A+ + G  Y WG       G  S S    P   S P+ +SF+Q + G  H L +  
Sbjct: 221 RHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGS 280

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           DG+    G +  G L +    SS  P+      VS + G+ V Q++AGA+HS  +
Sbjct: 281 DGKAYAWGNNDSGQLGNATTTSSLAPV-----LVSPMGGLAVTQVSAGADHSLAI 330



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 163/387 (42%), Gaps = 53/387 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +++WG  + GQLG   + +   P L++     + + ++ G  H LA+ S      G  +
Sbjct: 69  NIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSD-----GNAY 123

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WGR + G+LG+G    +  P  V+        TI+ + AG  HS  V  +G +++ G  
Sbjct: 124 AWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYN 183

Query: 154 TFGQLGHGDYRSHSSPVKVSSF---VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
             GQLG G   + S P+KVS+          Q++ G RHSL +  +    + Y +G  + 
Sbjct: 184 RSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSN---GKTYAWGEARG 240

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
           GQLG+    I     P +      +    +SA    S A+ ++G  Y WG        N+
Sbjct: 241 GQLGIGS--ISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNA 298

Query: 266 TSDVNCPQSLPS---SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           T+  +    L S    L+ +Q + G +H L +  DG     G + +G L +    +ST P
Sbjct: 299 TTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVP 358

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           +      V+  DGV   +I AG  HS                             A +  
Sbjct: 359 V-----MVTAPDGVTFTRIEAGGLHSLTA--------------------------ASDEN 387

Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             TWG    GQLG G +   + P  ++
Sbjct: 388 TYTWGANSFGQLGNGTSDGSLVPVAIS 414



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K ++WG    GQLG       L+P L++     +V+ ++ G  H LA+ +      G  +
Sbjct: 283 KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGAD-----GNAY 337

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG   +GQLG+  +  +  P  VT  DG   T T I AG  HS   +     +T G  +
Sbjct: 338 AWGLNVNGQLGNNTITTSTVPVMVTAPDG--VTFTRIEAGGLHSLTAASDENTYTWGANS 395

Query: 155 FGQLGHGDYRSHSSPVKVSSF 175
           FGQLG+G       PV +S F
Sbjct: 396 FGQLGNGTSDGSLVPVAISRF 416



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 36/180 (20%)

Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHV 291
           +SA  + S A+ ++G++Y WG       G NS  + + P   S P  ++F+Q + G +H 
Sbjct: 54  VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
           L +  DG     G +  G L +     S+ PL V+   V +  GV + Q+ AG  HS  V
Sbjct: 114 LAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPS--GVTISQVMAGGFHSLAV 171

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
                                       N  I +WG+   GQLG G T     P  V+ G
Sbjct: 172 --------------------------GSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAG 205


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V+ +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVTEVACGSYHSLVLTSD-----GE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V ++G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAV-NIACGQMCSMAVVNTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P +      IEI    +    SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPAPVIVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 336



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 22/272 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 61  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +   V I+     S A+   G +Y WG     
Sbjct: 177 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNG 235

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G  S+ +   P  + +   +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           + + P  V +EK       ++I+IAA   HSA
Sbjct: 296 NQSYPAPVIVEK------DRIIEIAAC--HSA 319



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 67  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT--EGEVFTWG 124

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + ++  ++     S  L+++G ++ WG      
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L    A   A G    + +   GEV + G + +G L      
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSG 243

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +++ L G++V ++A G  H+ V+T                         
Sbjct: 244 NQPTPC-----RIAALQGIRVQRVACGYAHTLVLT------------------------- 273

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 274 -DEGQVYAWGANSYGQLGTGNKSNQSYPAPV 303


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V+ +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVTEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V ++G ++  G 
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAV-NIACGQMCSMAVVNTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P +      IEI    +    SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPAPVIVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 312



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 22/272 (8%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 37  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 96  VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +   V I+     S A+   G +Y WG     
Sbjct: 153 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNG 211

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G  S+ +   P  + +   +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           + + P  V +EK       ++I+IAA   HSA
Sbjct: 272 NQSYPAPVIVEK------DRIIEIAAC--HSA 295



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 106/271 (39%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S   K +  ++ G    +VL       +V+ +G
Sbjct: 43  IFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT--EGEVFTWG 100

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V    ++  L + ++  ++     S  L+++G ++ WG      
Sbjct: 101 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L    A   A G    + +   GEV + G + +G L      
Sbjct: 160 VGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSG 219

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P  +A      L G++V ++A G  H+ V+T                         
Sbjct: 220 NQPTPCRIAA-----LQGIRVQRVACGYAHTLVLT------------------------- 249

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 250 -DEGQVYAWGANSYGQLGTGNKSNQSYPAPV 279


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G  + GQLG  R      P+ +   +   V +++CG  H +A+        GKVF
Sbjct: 42  RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHK-----GKVF 96

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  + +  P  +    G +  I  +S G  HS  +S+ G +F+ G  
Sbjct: 97  AWGAGSEGQLGIGEFKEISFMPTKIKALAGIK--IIQVSCGHYHSLALSEDGHVFSWGRN 154

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G + RS + P KV S     + Q+A G  HS  L    L    +G+GS + GQ
Sbjct: 155 SEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---SLTGTSFGWGSNRSGQ 211

Query: 213 LGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           L +S ++++  +  P     L ++ ++ IS   + +A L+ EG ++T+G
Sbjct: 212 LALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 260



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 23/234 (9%)

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           ++G +HS  +  +  +++CGD ++GQLG    +S   P  + +  + +V  ++CG  HS+
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            +   C   +V+ +G+G  GQLG+ + +  S  +P     L  I+I+ +S     S ALS
Sbjct: 88  AV---CHKGKVFAWGAGSEGQLGIGEFKEISF-MPTKIKALAGIKIIQVSCGHYHSLALS 143

Query: 252 AEGHLYTWGR--------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL 301
            +GH+++WGR        G NS S    PQ + S   +  +Q A G  H   L+  G   
Sbjct: 144 EDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSF 202

Query: 302 MLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             G +  G L+   +  +    +P S+       L  + VI I+ G EH+AV+T
Sbjct: 203 GWGSNRSGQLALSGNKVKEQIYKPHSIGA-----LKNLSVIYISCGYEHTAVLT 251



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 64/161 (39%), Gaps = 33/161 (20%)

Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
           S +   QAA G +H L+L  +  V   G +  G L      S+ RP     E +  L+ +
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERP-----EPIQALNDL 74

Query: 337 KVIQIAAGAEHSAVVTGK---FHWV-----RLFIISYTPF-FPPFFINVIA--------- 378
            V  ++ G EHS  V  K   F W      +L I  +    F P  I  +A         
Sbjct: 75  HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSC 134

Query: 379 ---------ENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVN 409
                    E+  + +WG    GQLGLG N+  Q  P+ V 
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK 175


>gi|348504160|ref|XP_003439630.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Oreochromis niloticus]
          Length = 1369

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 101/203 (49%), Gaps = 23/203 (11%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
           ++++WG    GQLG G R     SPQ  ++ SLS++ ++  A GG    AL+     + G
Sbjct: 632 QLYTWGQDCRGQLGLGTRKSVCRSPQ--HVPSLSAIPLIQVAAGGDQSFALS-----VSG 684

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG------ 145
            VFSWGR   GQLG G+  D   P PV   +  +    HIS G +H+  ++ S       
Sbjct: 685 GVFSWGRNDCGQLGLGDTKDRHTPAPVQCLNMKK--AQHISCGQDHTAILTKSSGXXXXX 742

Query: 146 --CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
              +FT G G  GQLGH   R+   P  V+      V +I CG  H+L L +     QVY
Sbjct: 743 XXAVFTFGSGQHGQLGHNSLRNELRPRLVAELWGAKVTKITCGRNHTLALTE---SKQVY 799

Query: 204 GFGSGKRGQLGVSKDRIRSVSLP 226
            FG   +GQLG  ++   SV LP
Sbjct: 800 SFGCEDQGQLGHREESNPSVPLP 822



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 10/200 (5%)

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHR 125
             +  ++CG   V  L+    V+ G++++WG+   GQLG G        P+ V       
Sbjct: 607 EKIEAVSCGDDVVALLSESGKVLYGQLYTWGQDCRGQLGLGTRKSVCRSPQHVPSLSA-- 664

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
             +  ++AG + S  +S SG +F+ G    GQLG GD +   +P  V     K    I+C
Sbjct: 665 IPLIQVAAGGDQSFALSVSGGVFSWGRNDCGQLGLGDTKDRHTPAPVQCLNMKKAQHISC 724

Query: 186 GMRHSLVLLKDC-----LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
           G  H+ +L K           V+ FGSG+ GQLG   + +R+   P++   L   ++  I
Sbjct: 725 GQDHTAILTKSSGXXXXXXXAVFTFGSGQHGQLG--HNSLRNELRPRLVAELWGAKVTKI 782

Query: 241 SANGDRSAALSAEGHLYTWG 260
           +   + + AL+    +Y++G
Sbjct: 783 TCGRNHTLALTESKQVYSFG 802



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS---SVIGGK 92
           V+SWG    GQLG G   D  +P  +   ++     ++CG  H   LT  S         
Sbjct: 686 VFSWGRNDCGQLGLGDTKDRHTPAPVQCLNMKKAQHISCGQDHTAILTKSSGXXXXXXXA 745

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF++G G  GQLGH  + + L P+ V    G +  +T I+ G NH+  +++S  +++ G 
Sbjct: 746 VFTFGSGQHGQLGHNSLRNELRPRLVAELWGAK--VTKITCGRNHTLALTESKQVYSFGC 803

Query: 153 GTFGQLGHGDYRSHSSPVKV 172
              GQLGH +  + S P+ V
Sbjct: 804 EDQGQLGHREESNPSVPLPV 823



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 143/376 (38%), Gaps = 91/376 (24%)

Query: 93  VFSWG----RGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITH----ISAGWNHSGFVSD 143
           +FSWG    RG   + G G           T  DG H   I+H    +SAG N   FV  
Sbjct: 526 MFSWGEDCQRGFYVKDGSG-------TDSTTTHDGVHYLNISHHIADLSAGRNVLAFVKS 578

Query: 144 SGCLFTC-----GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-- 196
           +G  F        DG   + G   +  H   ++           ++CG    + LL +  
Sbjct: 579 NGNAFIIRTNESKDGRRAR-GRQKFVKHKEKIEA----------VSCG-DDVVALLSESG 626

Query: 197 -CLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
             L  Q+Y +G   RGQLG+   K   RS   PQ    L  I ++ ++A GD+S ALS  
Sbjct: 627 KVLYGQLYTWGQDCRGQLGLGTRKSVCRS---PQHVPSLSAIPLIQVAAGGDQSFALSVS 683

Query: 254 GHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDG------ 298
           G +++WGR      G   T D + P  +   L+  +A   + G +H  +LT         
Sbjct: 684 GGVFSWGRNDCGQLGLGDTKDRHTPAPV-QCLNMKKAQHISCGQDHTAILTKSSGXXXXX 742

Query: 299 --EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
              V   G   HG L      +  RP  VA      L G KV +I  G  H+  +T    
Sbjct: 743 XXAVFTFGSGQHGQLGHNSLRNELRPRLVA-----ELWGAKVTKITCGRNHTLALT---- 793

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 416
                                 E++ + ++G  + GQLG     +   P  V L  E   
Sbjct: 794 ----------------------ESKQVYSFGCEDQGQLGHREESNPSVPLPVRLPQETSE 831

Query: 417 RDTQLEVFCGSGFTYA 432
              +  +F G   ++A
Sbjct: 832 LKIR-NIFAGENCSFA 846



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++G+G  GQLG   L +EL P+L+     + V+ + CG  H LALT        +V+S
Sbjct: 746 VFTFGSGQHGQLGHNSLRNELRPRLVAELWGAKVTKITCGRNHTLALTE-----SKQVYS 800

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHS 138
           +G    GQLGH E  +   P PV    +     I +I AG N S
Sbjct: 801 FGCEDQGQLGHREESNPSVPLPVRLPQETSELKIRNIFAGENCS 844


>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
          Length = 484

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 148/346 (42%), Gaps = 45/346 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S  ++ + ACG  H LALT       G VF
Sbjct: 132 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 186

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 187 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCPE 244

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 245 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 304

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 305 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCS 358

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 359 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 418

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   +    +   S A ++V  LDG+   Q+A G  HS V+
Sbjct: 419 PTFGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVI 461



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 154/379 (40%), Gaps = 63/379 (16%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AH L +T+      GK++SWGR   GQLGHG+      P+ +         I   + G N
Sbjct: 122 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE--AIVLAACGRN 174

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           H+  ++D+G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++  
Sbjct: 175 HTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLM-- 231

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E  
Sbjct: 232 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 279

Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                     T D    Q LP  ++     A G NH LVL     V   G   +G L   
Sbjct: 280 ---------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 327

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
           E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P 
Sbjct: 328 EQKDEMVP---RLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 384

Query: 372 FFIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDEF 414
              +                ++A + + ++WG     G+LG G+      PK      E 
Sbjct: 385 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 440

Query: 415 QNRDTQLEVFCGSGFTYAI 433
           +  D         G+++++
Sbjct: 441 KTLDGIFSEQVAMGYSHSL 459



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  + +  ++ +   ACG  H+L L   
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 183 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 237

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+       + Q  LG N       DG+ +        +  D E 
Sbjct: 238 YSFG----------CPE-------YGQ--LGHNS------DGKFI---ARAQRIEYDCEL 269

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ V+  +                 
Sbjct: 270 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 310

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 311 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGA-TQIYAGYTCSF 359

Query: 432 AIS 434
           A+S
Sbjct: 360 AVS 362



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 294 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 348

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
           T I AG+  S  VS+ G LF                              CG        
Sbjct: 349 TQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAA 408

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 409 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 464


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 175/432 (40%), Gaps = 91/432 (21%)

Query: 39  WGAGTDGQLGTGRLHDELSPQ---LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           WG G  G+LG G L    +P         +    + LACGGAH L LT       G+VF+
Sbjct: 39  WGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQS-----GRVFA 93

Query: 96  WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            G    GQLG G     +  P  VT F      +  ISAG +HS  V+  G LF  G  +
Sbjct: 94  TGLNDFGQLGIGSSTTHIVDPIEVTGFG---EKVVQISAGNHHSCAVTADGELFVWGKNS 150

Query: 155 FGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            GQLG G    +  S+P KV    +  V  +A G  HS+ + +   G +   +G+   G+
Sbjct: 151 SGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTE---GGEALSWGAAGAGR 207

Query: 213 LG-------VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
           LG       +    + S   P++   L  ++I  I+A    SA +  +G L+ +G+    
Sbjct: 208 LGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEK 267

Query: 263 -FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH--------GMLSD 313
            F  ++D   P  +       + A G  H   LT  G++   G + +        GM+  
Sbjct: 268 VFGRSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRS 327

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
           PE + ST            L  + V +++ G +H+AV++G+                   
Sbjct: 328 PEVLRST------------LFKLPVSKVSCGWKHTAVISGE------------------- 356

Query: 374 INVIAENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 421
                    I TWGWG              GQLG GN  D   P +V LG   +     +
Sbjct: 357 --------DIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNAR----AV 404

Query: 422 EVFCGSGFTYAI 433
            V CG   T AI
Sbjct: 405 HVSCGFNHTGAI 416


>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
           strain 10D]
          Length = 457

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 164/386 (42%), Gaps = 85/386 (22%)

Query: 36  VWSWGAGTDGQLGTG----------RLHDELSPQ-LLNLSSLSSVSM-----LACGGAHV 79
           +++ G G  GQLG G          R+   L P+ + N+   S+V++     +ACG  H 
Sbjct: 83  LYTVGHGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITNVGRSSAVALPPIEAVACGRYHT 142

Query: 80  LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH--------------- 124
            A++S      G++FSWG G +G+LG G  + +  P PV+                    
Sbjct: 143 FAVSS-----DGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAIP 197

Query: 125 -RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS-------SFV 176
               I  +  G++HS  +S  G ++TCG G +GQLGHG      S + V+       +  
Sbjct: 198 SECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDEHGNALP 257

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV-----------SL 225
           N  + ++A G RH+LVL  D    ++YGFGS + GQLG++    +             S 
Sbjct: 258 NLRIIKVASGDRHTLVLTDD---GRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSE 314

Query: 226 PQVTIG--LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQSLP 276
           P++  G  L    I  I+     S ALS +G +  WG G +       S +    PQ L 
Sbjct: 315 PRLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQILN 374

Query: 277 S------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
           +      S   +  A G  + L L  D E+ + G   +G+L     + +  P  +A E V
Sbjct: 375 TRNSPLASRRVTGIACGHENTLFLVSDNEIYVTGSGEYGLLG----IGAGAP-RMAFEPV 429

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFH 356
                   +Q+  G        G FH
Sbjct: 430 R-------VQLPPGFRVDRATMGHFH 448



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 51/270 (18%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP------------------QLLNLSSLSSVSMLACGG 76
           +++SWG G +G+LGTG       P                  + L + S   +  + CG 
Sbjct: 150 RLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAIPSECQIVAVECGY 209

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH-----RYTITHI 131
            H +AL++      G V++ G G+ GQLGHG   D      VTF D H        I  +
Sbjct: 210 HHSVALSAI-----GVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDEHGNALPNLRIIKV 264

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLG---HGDYRSHSSPVKVS------------SFV 176
           ++G  H+  ++D G ++  G   +GQLG     D  +  +P                +  
Sbjct: 265 ASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSEPRLLTGGALA 324

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV----TIGL 232
            + + QIACG RHS+ L       +V  +G G  GQLG+ +  I     PQ+       L
Sbjct: 325 GRRIAQIACGERHSVALSDQ---GEVICWGHGMSGQLGLGES-ITMTPTPQILNTRNSPL 380

Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRG 262
               + GI+   + +  L ++  +Y  G G
Sbjct: 381 ASRRVTGIACGHENTLFLVSDNEIYVTGSG 410



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 145/383 (37%), Gaps = 100/383 (26%)

Query: 96  WGRGSSGQLG--HGEMVDALYPK--PVTFFD---GHRYTITHI---SAGWNHSGFVSDSG 145
           WGR  + +LG  + E  D   P   P    D     R T  H+   + G +H+  +  +G
Sbjct: 23  WGRAKNHRLGIPYAEG-DIFQPSELPKIVLDRLVSDRRTPNHVLQVACGGSHTAILLRNG 81

Query: 146 CLFTCGDGTFGQLGHGD-YRSHSSPVKV---------------SSFVNKNVHQIACGMRH 189
            L+T G G +GQLG G   R  S P +V               S+     +  +ACG  H
Sbjct: 82  ALYTVGHGLYGQLGLGQRIRRVSLPTRVRGVLGPEAITNVGRSSAVALPPIEAVACGRYH 141

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH---------------- 233
           +  +  D    +++ +G GK G+LG   +    +  P  T+                   
Sbjct: 142 TFAVSSD---GRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAIPS 198

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVNCP---------------QSLPS 277
           + +IV +      S ALSA G +YT G G +      +C                 +LP 
Sbjct: 199 ECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDEHGNALP- 257

Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPERVSSTRPLSVA-------L 327
           +L   + A G  H LVLT DG +   G + +G L      ++ ++  P S         L
Sbjct: 258 NLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFSEPRL 317

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                L G ++ QIA G  HS                            +++   ++ WG
Sbjct: 318 LTGGALAGRRIAQIACGERHSV--------------------------ALSDQGEVICWG 351

Query: 388 WGEHGQLGLGNTCDQI-HPKVVN 409
            G  GQLGLG +      P+++N
Sbjct: 352 HGMSGQLGLGESITMTPTPQILN 374



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 98/251 (39%), Gaps = 54/251 (21%)

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
            +V Q+ACG  H+ +LL++     +Y  G G  GQLG+ + RIR VSLP    G+   E 
Sbjct: 62  NHVLQVACGGSHTAILLRN---GALYTVGHGLYGQLGLGQ-RIRRVSLPTRVRGVLGPEA 117

Query: 238 VGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
           +    N  RS+A++                       LP        A G  H   ++ D
Sbjct: 118 I---TNVGRSSAVA-----------------------LPP---IEAVACGRYHTFAVSSD 148

Query: 298 GEVLMLGGSHHGMLSDPERVSS--TRPLSVALEKVSNLDG--VKVIQIAAGAEHSAVVTG 353
           G +   GG  +G L     + S    P+S   EKV    G   + + I +  +  AV  G
Sbjct: 149 GRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAIPSECQIVAVECG 208

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
             H V L  I                   + T GWG +GQLG G+  D+     V   DE
Sbjct: 209 YHHSVALSAIG-----------------VVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDE 251

Query: 414 FQNRDTQLEVF 424
             N    L + 
Sbjct: 252 HGNALPNLRII 262


>gi|326519524|dbj|BAK00135.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1067

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 42/337 (12%)

Query: 33  VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
             +V+SWG+GT+ QLGTG  H +  P  ++    S +  +A    H +A++S      G+
Sbjct: 151 ATEVFSWGSGTNYQLGTGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSS-----DGE 205

Query: 93  VFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           +++WG G  G+LGH     G+    + P+ VT   G R  +  ++A  +H+   + +G L
Sbjct: 206 LYTWGFGRGGRLGHPDIRSGQTTAVITPRQVTVGLG-RKKVNVVAAAKHHTVIATSAGEL 264

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           FT G    GQLG+    +  +P +VSS   + +  +A   +HS  +       +V+ +GS
Sbjct: 265 FTWGSNREGQLGYPSVDTQPTPRRVSSL-KQRIIAVAAANKHSAAVADT---GEVFTWGS 320

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------- 260
            K GQLG       S  +P++   L      G+SA    +    A+G ++TWG       
Sbjct: 321 NKEGQLGYGTSNSASNCIPRMVEYLKGKVFKGVSAAKYHTLVFGADGEVFTWGHRLVTPR 380

Query: 261 -----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
                R      + N        L     A G  H   LT DG +     S         
Sbjct: 381 RVVIARCLKKGGNANVKFHRMERLQVISVAAGVMHSTALTSDGALFYWNSSD-------- 432

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
                  L +  ++V ++ G  V+ I+AG   +A+ T
Sbjct: 433 -------LDLRCQQVFSMCGRNVVSISAGKYWTALAT 462



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 50/227 (22%)

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
           +  +V+ +GSG   QLG     I+   LP     LH   I  ++A+   S A+S++G LY
Sbjct: 150 VATEVFSWGSGTNYQLGTGNAHIQK--LPCKVDALHGSYIKTVAASKFHSVAVSSDGELY 207

Query: 258 TWGRGFN-----------STSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLML 303
           TWG G              T+ V  P+ +   L   +    A   +H ++ T  GE+   
Sbjct: 208 TWGFGRGGRLGHPDIRSGQTTAVITPRQVTVGLGRKKVNVVAAAKHHTVIATSAGELFTW 267

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G +  G L  P   +   P      +VS+L   ++I +AA  +HSA V            
Sbjct: 268 GSNREGQLGYPSVDTQPTP-----RRVSSLKQ-RIIAVAAANKHSAAV------------ 309

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVV 408
                         A+   + TWG  + GQLG G  N+     P++V
Sbjct: 310 --------------ADTGEVFTWGSNKEGQLGYGTSNSASNCIPRMV 342


>gi|357111495|ref|XP_003557548.1| PREDICTED: uncharacterized protein LOC100828625 [Brachypodium
           distachyon]
          Length = 1078

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 159/343 (46%), Gaps = 42/343 (12%)

Query: 27  EEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           + ++    +V+SWG+GT+ QLGTG  H +  P  +     S +  +A    H +A++S  
Sbjct: 145 DSQDSVATEVFSWGSGTNYQLGTGNAHIQKLPCKVEALHGSYIKTVAASKFHSVAVSS-- 202

Query: 87  SVIGGKVFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
               G++++WG G  G+LGH     G+    + P+ VT   G R  +  ++A  +H+   
Sbjct: 203 ---DGELYTWGFGRGGRLGHPDIQSGQTTAVITPRQVTVGLG-RKQVNVVAAAKHHTVIA 258

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           +++G LFT G    GQLG+    + ++P +VSS   + +  +A   +HS  +       +
Sbjct: 259 TEAGELFTWGSNREGQLGYPSVDTQATPRRVSSL-KQRIISVAAANKHSAAVADT---GE 314

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           V+ +G  K GQLG       S  +P++   L    + G+SA    +  L A+  ++TWG 
Sbjct: 315 VFTWGCNKEGQLGYGTSNSASNCIPRMVEYLKGKVLKGVSAAKYHTLVLGADSEVFTWGH 374

Query: 262 GFNSTSDVNCPQSLP----SSLSFSQ--------AALGWNHVLVLTGDGEVLMLGGSHHG 309
              +   V   + L     +S+ F +         A G  H   LT DG +         
Sbjct: 375 RLVTPRRVVIARCLKKGGNTSVKFHRMQRLHVISVAAGVMHSTALTADGAIFSW------ 428

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           + SDP+         +  ++V ++ G  V+ I+AG   +A+ T
Sbjct: 429 VSSDPD---------LRCQQVFSMCGRNVVSISAGKYWTALAT 462



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 95/231 (41%), Gaps = 50/231 (21%)

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
           +D +  +V+ +GSG   QLG     I+   LP     LH   I  ++A+   S A+S++G
Sbjct: 147 QDSVATEVFSWGSGTNYQLGTGNAHIQK--LPCKVEALHGSYIKTVAASKFHSVAVSSDG 204

Query: 255 HLYTWGRGFN-----------STSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEV 300
            LYTWG G              T+ V  P+ +   L   Q    A   +H ++ T  GE+
Sbjct: 205 ELYTWGFGRGGRLGHPDIQSGQTTAVITPRQVTVGLGRKQVNVVAAAKHHTVIATEAGEL 264

Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRL 360
              G +  G L  P   +   P      +VS+L   ++I +AA  +HSA V         
Sbjct: 265 FTWGSNREGQLGYPSVDTQATP-----RRVSSLKQ-RIISVAAANKHSAAV--------- 309

Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                            A+   + TWG  + GQLG G  N+     P++V 
Sbjct: 310 -----------------ADTGEVFTWGCNKEGQLGYGTSNSASNCIPRMVE 343


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 95  EVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSN-KQVIEVACGSYHSLVLTSD-----GE 148

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNK-VVVNIACGQMCSVAVVDTGEVYVWGY 207

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDE---GQVYAWGANSYGQ 264

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      IEI    +    SAA +  GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDRIIEIAACHST-HTSAAKTQGGHVYMWGQ 312



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + I  ++F  G   SG LG G++   L P+ +      +       +G  H    +  G 
Sbjct: 37  TTINDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSG-PHIILATTEGE 95

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P +VS+   NK V ++ACG  HSLVL  D    +VY +
Sbjct: 96  VFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSD---GEVYAW 152

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      +++   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 153 GYNNSGQVGSGSTANQAIP-RRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNG 211

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 212 QLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++I+IAA
Sbjct: 272 NQSYPTPVVVEK------DRIIEIAA 291



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 43/271 (15%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +F  G    G LG GD +S   P ++ S  +K +  ++ G    ++L       +V+ +G
Sbjct: 43  IFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATT--EGEVFTWG 100

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
                QLG        V   QV+  L + +++ ++     S  L+++G +Y WG      
Sbjct: 101 HNGYTQLGNGTTNHGLVPC-QVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQ 159

Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G  ST++   P+ +   L        A G    + +   GEV + G + +G L      
Sbjct: 160 VGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSG 219

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           +   P      +V+ L G++V ++A G  H+ V+T                         
Sbjct: 220 NQPTPC-----RVAALQGIRVQRVACGFAHTLVLT------------------------- 249

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
            +   +  WG   +GQLG GN  +Q +P  V
Sbjct: 250 -DEGQVYAWGANSYGQLGTGNKSNQSYPTPV 279


>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
 gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
          Length = 500

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 150/348 (43%), Gaps = 49/348 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S  ++ + ACG  H LALT       G VF
Sbjct: 148 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 202

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 203 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCPE 260

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 261 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 320

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 321 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCS 374

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 375 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 434

Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   D +  SST     A ++V  LDG+   Q+A G  HS V+
Sbjct: 435 PTFGELGYGDHKPKSST-----AAQEVKTLDGIFSEQVAMGYSHSLVI 477



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 154/380 (40%), Gaps = 63/380 (16%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
            AH L +T+      GK++SWGR   GQLGHG+      P+ +         I   + G 
Sbjct: 137 AAHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE--AIVLAACGR 189

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           NH+  ++D+G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++ 
Sbjct: 190 NHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLM- 247

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E 
Sbjct: 248 -DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE- 295

Query: 255 HLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                      T D    Q LP  ++     A G NH LVL     V   G   +G L  
Sbjct: 296 ----------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 342

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFP 370
            E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P
Sbjct: 343 AEQKDEMVP---RLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYP 399

Query: 371 PFFIN----------------VIAENRAIMTWGWG-EHGQLGLGNTCDQIHPKVVNLGDE 413
               +                ++A + + ++WG     G+LG G+      PK      E
Sbjct: 400 KAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQE 455

Query: 414 FQNRDTQLEVFCGSGFTYAI 433
            +  D         G+++++
Sbjct: 456 VKTLDGIFSEQVAMGYSHSL 475



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  + +  ++ +   ACG  H+L L   
Sbjct: 139 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 198

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 199 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 253

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+            LG N       DG+ +        +  D E 
Sbjct: 254 YSFG----------CPE---------YGQLGHN------SDGKFI---ARAQRIEYDCEL 285

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ V+  +                 
Sbjct: 286 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 326

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 327 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAT-QIYAGYTCSF 375

Query: 432 AIS 434
           A+S
Sbjct: 376 AVS 378



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 310 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 364

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
           T I AG+  S  VS+ G LF                              CG        
Sbjct: 365 TQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAA 424

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 425 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 480


>gi|356571739|ref|XP_003554031.1| PREDICTED: uncharacterized protein LOC100800604 [Glycine max]
          Length = 1061

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 43/339 (12%)

Query: 33  VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
             +V+SWG+GT+ QLGTG  H +  P  ++    S + +++ G  H +ALT+      G+
Sbjct: 153 ATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTA-----RGE 207

Query: 93  VFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           V++WG G  G+LGH +          + P+ VT   G R  +  I A  +H    +  G 
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMA-IGAAKHHMVIATQGGE 266

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +FT G    GQLG+    +  +P +VSS  ++ V  +A   +H+ V+    LG +V+ +G
Sbjct: 267 VFTWGSNREGQLGYPSVDTQPTPRRVSSLRSRIV-AVAAANKHTAVV--SDLG-EVFTWG 322

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
             + GQLG       S   P+V   L    +  +SA    +  L ++G ++TWG    + 
Sbjct: 323 CNREGQLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTWGHRLVTP 382

Query: 267 SDVNCPQSLPSS------------LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
             V   ++L  S            LS    A G  H + LT DG +       + + SDP
Sbjct: 383 KRVVVSRNLKRSGSTLLKFHRKERLSVVSIAAGMVHSMALTDDGALF------YWVSSDP 436

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           +         +  +++  + G  ++ I+AG   +A VT 
Sbjct: 437 D---------LRCQQLYAMCGRNMVSISAGKYWTAAVTA 466



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 35/295 (11%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           S +  +VFSWG G++ QLG G       P  V    G    I  ISAG  HS  ++  G 
Sbjct: 150 SSVATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGS--FIKLISAGKFHSVALTARGE 207

Query: 147 LFTCGDGTFGQLGHGDYRSHS------SPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLG 199
           ++T G G  G+LGH D+  HS      +P +V+S + ++ V  I     H ++  +   G
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIGAAKHHMVIATQ---G 264

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
            +V+ +GS + GQLG     + +   P+    L    IV ++A    +A +S  G ++TW
Sbjct: 265 GEVFTWGSNREGQLGYPS--VDTQPTPRRVSSLRS-RIVAVAAANKHTAVVSDLGEVFTW 321

Query: 260 G------RGF-NSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           G       G+  S S  N    +  SL   + ++ +    H +VL  DGEV   G   H 
Sbjct: 322 GCNREGQLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTWG---HR 378

Query: 310 MLSDPERVSSTRPLSVA---LEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWV 358
           +++ P+RV  +R L  +   L K    + + V+ IAAG  HS  +T     F+WV
Sbjct: 379 LVT-PKRVVVSRNLKRSGSTLLKFHRKERLSVVSIAAGMVHSMALTDDGALFYWV 432



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 51/229 (22%)

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
           +  +V+ +GSG   QLG     I+ +     ++G   I++  ISA    S AL+A G +Y
Sbjct: 152 VATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKL--ISAGKFHSVALTARGEVY 209

Query: 258 TWGRG------------FNSTSDVNCPQSLPSSL-SFSQAALGW--NHVLVLTGDGEVLM 302
           TWG G             +  + V  P+ + S L S    A+G   +H+++ T  GEV  
Sbjct: 210 TWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIGAAKHHMVIATQGGEVFT 269

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
            G +  G L  P   +   P      +VS+L   +++ +AA  +H+AVV+          
Sbjct: 270 WGSNREGQLGYPSVDTQPTP-----RRVSSLRS-RIVAVAAANKHTAVVSD--------- 314

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                         + E   + TWG    GQLG G  N+     P+VV 
Sbjct: 315 --------------LGE---VFTWGCNREGQLGYGTSNSASNYTPRVVE 346


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 137/316 (43%), Gaps = 54/316 (17%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           ++S G  H+  V+ +  L+  G   +GQLG G       P  V +   + V   ACG  H
Sbjct: 39  YLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +L+L    +GN VY  G    GQLG+     R+ +  +++    +  I  +SA  + SAA
Sbjct: 99  TLILT--VVGN-VYAAGGNNEGQLGLGDTEERN-TFHRISFFTSEHNIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           LS +G L+ WG       G N    V  P  +      S  + G+ H   +T DGE+   
Sbjct: 155 LSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWISCGYYHSAFVTMDGELYTF 214

Query: 304 GGSHHGMLSDPER--VSSTRPLSVALEKVSNLDGV--KVIQIAAGAEHSAVVTGKFHWVR 359
           G    G L  P+   ++   P  VA        G+  KVIQ+A G  H+ V+T K     
Sbjct: 215 GEPESGKLGLPKELLINHRTPQLVA--------GIPEKVIQVACGGGHTVVLTEK----- 261

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVVNLGDEFQNRD 418
                                 A+ T+G G+ GQLGLG  C + + PKV+   ++ +N+ 
Sbjct: 262 ----------------------AVYTFGLGQFGQLGLGTFCFETLEPKVI---EQIKNQK 296

Query: 419 TQLEVFCGSGFTYAIS 434
               + CG   T  IS
Sbjct: 297 ITY-ISCGENHTALIS 311



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 134/288 (46%), Gaps = 26/288 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G   D   P  +       V   ACG  H L LT     + G V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHTLILT-----VVGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  +S+ G LF  GD +
Sbjct: 110 AAGGNNEGQLGLGDTEERNTFHRISFFTS-EHNIKQLSAGSNTSAALSEDGRLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  D  S   P +V+  + K +  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLNDVISVCVPHQVN--IGKPISWISCGYYHSAFVTMD---GELYTFGEPESGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----------F 263
           + K+ + +   PQ+  G+ + +++ ++  G  +  L+ E  +YT+G G           F
Sbjct: 224 LPKELLINHRTPQLVAGIPE-KVIQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFCF 281

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            +       Q     +++   + G NH  +++  G +   G   HG L
Sbjct: 282 ETLEPKVIEQIKNQKITY--ISCGENHTALISDIGLMYTFGDGRHGKL 327



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++++G    G+LG  +  L +  +PQL+       V  +ACGG H + LT  +      
Sbjct: 210 ELYTFGEPESGKLGLPKELLINHRTPQLV-AGIPEKVIQVACGGGHTVVLTEKA------ 262

Query: 93  VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G    + L PK +      +  IT+IS G NH+  +SD G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQK--ITYISCGENHTALISDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +   P+  S F+   V  +ACG   +LV 
Sbjct: 321 DGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGCQTLVF 364


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  102 bits (253), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 85/284 (29%), Positives = 124/284 (43%), Gaps = 57/284 (20%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +++WG G  G+LG G L     P+L+       SL  VS +A GG H +ALT     + G
Sbjct: 182 LYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVS-VANGGKHTVALT-----VCG 235

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKP--VTF------------------------FDGHR 125
            V+S+G   S QLG G +  + Y  P  VTF                        F+  +
Sbjct: 236 NVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQ 295

Query: 126 YT-------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
                    I  +S   N S  +S  G L+T G G  G+LGHGD    S+P +V S    
Sbjct: 296 QQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGH 355

Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
            +  ++ G  HS+ L K     +V+ +G G+ GQLG      + ++  Q+     +  I 
Sbjct: 356 TIVDMSLGGGHSMALTKR---GEVFSWGRGENGQLGHGTFTSQQMTPKQIQ-AFQNKTIK 411

Query: 239 GISANGDRSAALSAEGHLYTWGRG----------FNSTSDVNCP 272
            ISA G  S A+   G ++ WGRG           +S  D+N P
Sbjct: 412 VISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDINSP 455



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 20/187 (10%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G +++WGRG +G+LGHG+ +    PK V    GH  TI  +S G  HS  ++  G +F+ 
Sbjct: 322 GYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGH--TIVDMSLGGGHSMALTKRGEVFSW 379

Query: 151 GDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           G G  GQLGHG + S   +P ++ +F NK +  I+ G  HS+ +  D  G+ ++ +G G 
Sbjct: 380 GRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAI--DTNGS-MFAWGRGD 436

Query: 210 RGQLGVSK--DRIRSVSLPQVTIGLHDI------------EIVGISANGDRSAALSAEGH 255
            G LGVS   D +  ++ P +   L++               + +S+    + A +  G 
Sbjct: 437 YGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGD 496

Query: 256 LYTWGRG 262
           LY+WG G
Sbjct: 497 LYSWGCG 503



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 92/397 (23%), Positives = 157/397 (39%), Gaps = 92/397 (23%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH-RYT 127
           V  ++ G  H   +T       G +++WG G  G+LGHG +     P+ V FF+      
Sbjct: 163 VVFISTGAIHTSIITDK-----GHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLR 217

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--HSSPVKV------------- 172
           +  ++ G  H+  ++  G +++ G     QLG G+  S  +S+P  V             
Sbjct: 218 VVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNS 277

Query: 173 ----------SSFVNKNVHQ----------IACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
                     S+  NK   Q          ++C    S  + K  LG  +Y +G G  G+
Sbjct: 278 SSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISK--LG-YLYTWGRGDNGR 334

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------- 265
           LG     ++S   P+  + LH   IV +S  G  S AL+  G +++WGRG N        
Sbjct: 335 LGHGDSLMQST--PKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTF 392

Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS---- 319
           TS    P+ + +  + +    + G  H + +  +G +   G   +G+L     + S    
Sbjct: 393 TSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDI 452

Query: 320 TRPLSVALEKVSNLD-------GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPF 372
             P+ +     SN         G + I +++G +H+   T                    
Sbjct: 453 NSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQT-------------------- 492

Query: 373 FINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                 EN  + +WG G   +LGL N  +Q+ PK +N
Sbjct: 493 ------ENGDLYSWGCGSGNRLGLANEENQLIPKKLN 523



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 28/214 (13%)

Query: 35  KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG G +GQLG G     +++P+ +      ++ +++ GG H +A+ +      G +
Sbjct: 375 EVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDT-----NGSM 429

Query: 94  FSWGRGSSGQLGHGEMVDAL--YPKPVTF--------------FDGHRYTITHISAGWNH 137
           F+WGRG  G LG    +D+L     PV                  G R+   ++S+G+ H
Sbjct: 430 FAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERF--INVSSGFQH 487

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ-IACGMRHSLVLLKD 196
           +   +++G L++ G G+  +LG  +  +   P K++   N +     +CG   ++++ K 
Sbjct: 488 NVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCGEIITIIVEKK 547

Query: 197 CLGNQVYGFGSGKRGQLGVSK---DRIRSVSLPQ 227
            + N      +      G++K   D  + + LP+
Sbjct: 548 LIENSDTSTSTPINTSSGITKSTGDDSKELVLPK 581


>gi|256075111|ref|XP_002573864.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
           mansoni]
 gi|360044963|emb|CCD82511.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
           mansoni]
          Length = 414

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 169/443 (38%), Gaps = 97/443 (21%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WGA + GQLGTG   D   P+++N +    V++++ GG H L            +FS G
Sbjct: 3   TWGANSHGQLGTGDDKDAYEPKIINFTD--PVALISGGGGHSLISNE------NNIFSCG 54

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             S GQLG     +     P +F      T+  +S GW+ S  V   G +F+ G   +GQ
Sbjct: 55  LNSVGQLGRSNDCNHFKIIPFSFAP----TVHKVSCGWDFSVAVLSDGSVFSWGSNEYGQ 110

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG     S   PV++     + V  I+ G+RH   ++   +  +++G+GS +R QL V K
Sbjct: 111 LGKESINSSIVPVRIDI---EPVRSISAGLRH---VVSVTISGKLFGWGSNRRKQLFVDK 164

Query: 218 --------DRIRSVSLPQVTIG--LHDI-EIVGISANGDRSAALSAEGHLYTWG--RGFN 264
                   D  + +      +   L D  E V  +A    S A +    L  +G  R F 
Sbjct: 165 VLNKAEHYDESKQICYRPTLLNSVLGDTHEWVDCAAGAYHSVARTRTNKLALFGDTRFFK 224

Query: 265 STSDV-----NCPQSLPSSLSFS----------QAALGWNHVLVLTGDGEVLMLGGSHHG 309
             S+V     N    L S + +           Q   GW+HVLV T  GEV   G S  G
Sbjct: 225 LKSEVHDLSLNTESRLSSPIWYDAELFGNNKVEQVVCGWSHVLVRTSVGEVYSWGRSDFG 284

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDG--------------VKVIQIAAGAEHSAVVTGKF 355
            L     + S + +  + E   N D               V V  IA G+EHS       
Sbjct: 285 QLGRTVNILS-KFIGKSNEIFPNFDAYPGKVHFHLNDGHEVTVKTIACGSEHSL------ 337

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
                                I  N  +  WGW EHG  G+          +     + +
Sbjct: 338 --------------------AIDSNGQLWVWGWNEHGMCGV----------ITKTASQIE 367

Query: 416 NRDTQLEVFCGSGFTYAISRHCL 438
              TQ EV       Y IS  C 
Sbjct: 368 QHGTQEEVIPYITQPYRISFRCF 390



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 107/267 (40%), Gaps = 59/267 (22%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+SWG+   GQLG   ++  + P  +++  + S+S    G  HV+++T     I GK+F 
Sbjct: 100 VFSWGSNEYGQLGKESINSSIVPVRIDIEPVRSIS---AGLRHVVSVT-----ISGKLFG 151

Query: 96  WGRGSSGQ------LGHGEMVD-----ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           WG     Q      L   E  D        P  +    G  +     +AG  HS   + +
Sbjct: 152 WGSNRRKQLFVDKVLNKAEHYDESKQICYRPTLLNSVLGDTHEWVDCAAGAYHSVARTRT 211

Query: 145 GCLFTCGDGTFGQLGH-------GDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLK 195
             L   GD  F +L               SSP+   +  F N  V Q+ CG  H  VL++
Sbjct: 212 NKLALFGDTRFFKLKSEVHDLSLNTESRLSSPIWYDAELFGNNKVEQVVCGWSH--VLVR 269

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL----------------------H 233
             +G +VY +G    GQLG      R+V++    IG                       H
Sbjct: 270 TSVG-EVYSWGRSDFGQLG------RTVNILSKFIGKSNEIFPNFDAYPGKVHFHLNDGH 322

Query: 234 DIEIVGISANGDRSAALSAEGHLYTWG 260
           ++ +  I+   + S A+ + G L+ WG
Sbjct: 323 EVTVKTIACGSEHSLAIDSNGQLWVWG 349


>gi|325192607|emb|CCA27034.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 362

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 172/423 (40%), Gaps = 100/423 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE-----------LSPQLLNLSSLSSVSMLACGGAHVLALT 83
           K+++WG+    QLG G +              L+P   N   + +V  +ACG  + +A+T
Sbjct: 13  KLFAWGSNDHHQLGIGTMMQSSGSDRVQRTNILAPCAANWV-VRNVVAVACGWQNTIAIT 71

Query: 84  SPSSVIGG-------KVFSWGRGSSGQLGHG-EMVDALYPKPVT-FFDGHRYTITHISAG 134
            P ++  G       KVF WG    GQLG   E +D   P  +  +     Y +  +S G
Sbjct: 72  GPVNLTEGTQSSHEHKVFCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSVSCG 131

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVL 193
           W HS  V+ +G  F  G G  G+LG G    HS +P ++     +   Q+ CG +HS+ +
Sbjct: 132 WKHSLLVTATGEAFAWGTGRHGELGLGTSILHSVNPTRI--LTRQMFQQVHCGWQHSVFV 189

Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
             D    +V   GS K GQLG + D +  +  P++       E+                
Sbjct: 190 SFD---GKVSSCGSNKHGQLG-TNDSLAPLYSPRLITTTESDEV---------------- 229

Query: 254 GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                                   S+   Q ++GW+H + +T   EVL  G   HG L  
Sbjct: 230 -----------------------KSIVVKQISVGWHHCVCITLGNEVLSWGKGSHGQLGI 266

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
                +  P S+ ++ + +     + Q+A G+EH+ ++T                     
Sbjct: 267 GLDDGAYTPTSILIDPIKHR---AISQVACGSEHTLLLT--------------------- 302

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYA 432
                 + ++ + GWGEHG LG G T ++  P  +     FQ++   +E V  G   + A
Sbjct: 303 -----HDGSVYSCGWGEHGNLGHGTTTNEDIPSEILY---FQDQQLAVESVRAGGAVSIA 354

Query: 433 ISR 435
           I+R
Sbjct: 355 IAR 357


>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
 gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 434

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 174/426 (40%), Gaps = 74/426 (17%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           WG+G  G+LG G L  + +P + +  S  S++ +ACGGAH L LT        +VF+ G 
Sbjct: 54  WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETR-----RVFATGL 108

Query: 99  GSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
              GQLG  ++   A+ P  V+  D     I HISAG+ HS  ++  G L+  G  + GQ
Sbjct: 109 NDCGQLGVSDVKSHAMDPLEVSGLD---KDILHISAGYYHSAAITVDGELYMWGKNSSGQ 165

Query: 158 LGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           LG G    R    P KV +     +  +A G  HS+ +     G +V  +G G  G+LG 
Sbjct: 166 LGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGGGSGRLGH 222

Query: 216 SKD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
                     R  S   P++   L  I++  ++A    SA     G  + +G       G
Sbjct: 223 GHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMG 282

Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
           F    +   P  +       + A G  H  V+T  GE+   G + +G L       S  P
Sbjct: 283 FGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSP 342

Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRA 382
           + V    + +     V Q++ G +H+A ++                           +  
Sbjct: 343 VRVEGPFLES----TVSQVSCGWKHTAAIS---------------------------DNN 371

Query: 383 IMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
           + TWGWG              GQLG G+  D   P +V+LG   +     + + CG   T
Sbjct: 372 VFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVR----AVHISCGFNHT 427

Query: 431 YAISRH 436
            A+  H
Sbjct: 428 AAVLEH 433


>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
          Length = 498

 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 150/348 (43%), Gaps = 49/348 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S  ++ + ACG  H LALT       G VF
Sbjct: 146 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 200

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 201 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCPE 258

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 259 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 318

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 319 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCS 372

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 373 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 432

Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   D +  SST     A ++V  LDG+   Q+A G  HS V+
Sbjct: 433 PTFGELGYGDHKPKSST-----AAQEVKTLDGIFSEQVAMGYSHSLVI 475



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 154/380 (40%), Gaps = 63/380 (16%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
            AH L +T+      GK++SWGR   GQLGHG+      P+ +         I   + G 
Sbjct: 135 AAHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE--AIVLAACGR 187

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           NH+  ++D+G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++ 
Sbjct: 188 NHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLM- 245

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E 
Sbjct: 246 -DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE- 293

Query: 255 HLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                      T D    Q LP  ++     A G NH LVL     V   G   +G L  
Sbjct: 294 ----------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 340

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFP 370
            E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P
Sbjct: 341 AEQKDEMVP---RLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYP 397

Query: 371 PFFIN----------------VIAENRAIMTWGWG-EHGQLGLGNTCDQIHPKVVNLGDE 413
               +                ++A + + ++WG     G+LG G+      PK      E
Sbjct: 398 KAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQE 453

Query: 414 FQNRDTQLEVFCGSGFTYAI 433
            +  D         G+++++
Sbjct: 454 VKTLDGIFSEQVAMGYSHSL 473



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  + +  ++ +   ACG  H+L L   
Sbjct: 137 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 196

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 197 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 251

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+            LG N       DG+ +        +  D E 
Sbjct: 252 YSFG----------CPE---------YGQLGHN------SDGKFI---ARAQRIEYDCEL 283

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ V+  +                 
Sbjct: 284 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 324

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 325 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAT-QIYAGYTCSF 373

Query: 432 AIS 434
           A+S
Sbjct: 374 AVS 376



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 308 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 362

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
           T I AG+  S  VS+ G LF                              CG        
Sbjct: 363 TQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAA 422

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 423 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 478


>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
 gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
          Length = 394

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 167/405 (41%), Gaps = 73/405 (18%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WGA + GQLG G   D L PQL+    +  + +  ++ GG H  A+T       G 
Sbjct: 10  RLFAWGANSYGQLGLGTTQDSLLPQLVTGFPNHETVIKSISAGGGHSAAVTD-----AGH 64

Query: 93  VFSWGRGSSGQLGHGEMVD----ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
           V+  G+ S GQLG     D    +L P  +T        ++ ++ GW+ +  ++DSG L 
Sbjct: 65  VYVCGQNSEGQLGLNHTTDVTHFSLCPGTLTL------RVSKVACGWDFTLILTDSGELL 118

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           +CG  T+ QLG         P  +     + V  +A G+RH L L  +    Q++ +GSG
Sbjct: 119 SCGANTYSQLGRAGEERSCIPRPLD-IQKRKVLDVAAGLRHVLALTDN---GQIFQWGSG 174

Query: 209 -----KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
                +R         + S + P    G++ I    ++A      ALS  G +Y WG   
Sbjct: 175 LASHARRFSQQKPIPAVYSSTEPCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSNK 234

Query: 263 ----FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                +S   +  P  + + L   +  +    GW H++  T  G+V   G +++  L  P
Sbjct: 235 HGQLLHSDPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTDTGKVFTWGRANYSQLGRP 294

Query: 315 ERVSSTRPLSVALEKVS---------NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
                T      L+ +S         +L G    Q+A G+EH+  V G            
Sbjct: 295 PNSEGTGLHETVLQGISANQLPAWIPSLTGSS--QVACGSEHNLAVCGGL---------- 342

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                            + +WGW EHG  G G+  +   P +V +
Sbjct: 343 -----------------LYSWGWNEHGMCGNGSETNVPVPTLVGI 370


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 150/353 (42%), Gaps = 52/353 (14%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V +WG G  GQLG G   +  +   V   D   Y ++ + AG  +S  + D G LFT G 
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDWAHRVAALD--PYAVSAVVAGSRNSLAICDDGRLFTWGW 67

Query: 153 GTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              G LGH  + ++ SSP  V +     + Q A G  H L +       + Y +G  + G
Sbjct: 68  NQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK---GRAYAWGGNEYG 124

Query: 212 QLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
           Q G   +R         R +  PQ       +++  ++A G  S  L+ EGH++TWG+ +
Sbjct: 125 QCGEEPERKEDGTRALRRDIPTPQRCA--LKLKVQQVAAGGTHSVVLTQEGHVWTWGQPW 182

Query: 264 --NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
                  ++ P  +         A+G  H L L+ D  +   G + +G L     +  T+
Sbjct: 183 PPGDIKQISTPVRVQGLEKVMMIAVGAFHNLALSEDAVLWAWGNNEYGQLG----IGDTQ 238

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
           P S  + +V  L G+ ++ IAAG  HS  +T                          ++ 
Sbjct: 239 PRSQPI-RVEGLSGLSLVDIAAGGWHSTALT--------------------------KDG 271

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
            +  WG GEHG+LG G   D     +V L  +  + +  ++V CG   + A++
Sbjct: 272 EVYAWGRGEHGRLGFG---DDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALT 321



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 155/394 (39%), Gaps = 69/394 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V +WG+G DGQLG G   ++     +      +VS +  G  + LA+        G++F+
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICD-----DGRLFT 64

Query: 96  WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG    G LGH  E      P PV    G +     I  GW H   V D G  +  G   
Sbjct: 65  WGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAI-GGW-HCLAVDDKGRAYAWGGNE 122

Query: 155 FGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +GQ G    R            P      +   V Q+A G  HS+VL ++     V+ + 
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQE---GHVWTW- 178

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
               GQ     D I+ +S P    GL  + ++ + A    + ALS +  L+ WG    G 
Sbjct: 179 ----GQPWPPGD-IKQISTPVRVQGLEKVMMIAVGAF--HNLALSEDAVLWAWGNNEYGQ 231

Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPER 316
               D   P+S P      S LS    A G  H   LT DGEV   G   HG L    ++
Sbjct: 232 LGIGDTQ-PRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDK 290

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
            S   PL V L     LDG  ++Q++ G  HS  +T                        
Sbjct: 291 SSHMVPLKVQL-----LDGEDIVQVSCGGTHSVALT------------------------ 321

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
              +  I ++G G+HG+LG G      HP  V L
Sbjct: 322 --SDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPL 353



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 148/350 (42%), Gaps = 57/350 (16%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    G LG       E SP  +   +   +   A GG H LA+        G+ 
Sbjct: 61  RLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK-----GRA 115

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR---------------YTITHISAGWNHS 138
           ++WG    GQ G          +P    DG R                 +  ++AG  HS
Sbjct: 116 YAWGGNEYGQCGE---------EPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHS 166

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
             ++  G ++T G         GD +  S+PV+V     + V  IA G  H+L L +D +
Sbjct: 167 VVLTQEGHVWTWGQ----PWPPGDIKQISTPVRVQGL--EKVMMIAVGAFHNLALSEDAV 220

Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
              ++ +G+ + GQLG+   + RS   P    GL  + +V I+A G  S AL+ +G +Y 
Sbjct: 221 ---LWAWGNNEYGQLGIGDTQPRS--QPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYA 275

Query: 259 WGRGF---------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
           WGRG           S+  V     L       Q + G  H + LT DG +   G   HG
Sbjct: 276 WGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHG 335

Query: 310 MLSDPERVSSTRPLSVAL-----EKVSNLDGV-KVIQIAAGAEHS-AVVT 352
            L    +V++  P+ V L     +  +  DG+ +   +A G  H+ A+VT
Sbjct: 336 RLGYGRKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAIVT 385


>gi|147822080|emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
          Length = 653

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 41/342 (11%)

Query: 28  EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           E +    +++SWG+G + QLGTG  H +  P  ++    + +  ++    H +A+++   
Sbjct: 148 ERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSA--- 204

Query: 88  VIGGKVFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
              G+V++WG G  G+LGH E          + P+ VT   G R  +  I+A  +H+   
Sbjct: 205 --RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSR-RVKAIAAAKHHTVVA 261

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           ++ G +FT G    GQLG+    +   P +VSS  +K V  +A   +H+ V+ +     +
Sbjct: 262 TEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-AVAAANKHTAVISES---GE 317

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           V+ +G  K+GQLG       S   P+V   L    + G++A    +  L A+G ++TWG 
Sbjct: 318 VFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGH 377

Query: 262 GFNSTSDV----NCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGML 311
              +   V    N  ++  + L F Q       A G  H + LT DG +       + + 
Sbjct: 378 RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIF------YWVS 431

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           SDP+         +  ++V +L G  V  I+AG    A VT 
Sbjct: 432 SDPD---------LRCQQVYSLCGRTVSSISAGKYWIAAVTA 464



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 51/232 (21%)

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
           +D +  +++ +GSG   QLG     I+   LP     LH   I  +SA    S A+SA G
Sbjct: 149 RDSVATELFSWGSGVNYQLGTGNTHIQK--LPCKVDSLHGTFIKSVSAAKFHSVAVSARG 206

Query: 255 HLYTWGRG------------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGE 299
            +YTWG G             +  + V  P+ +   L   +    A   +H +V T  GE
Sbjct: 207 EVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGE 266

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   G +  G L        T+P+     +VS+L   K++ +AA  +H+AV         
Sbjct: 267 VFTWGSNREGQLGYTS--VDTQPIP---RRVSSLKS-KIVAVAAANKHTAV--------- 311

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                            I+E+  + TWG  + GQLG G  N+     P+VV 
Sbjct: 312 -----------------ISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVE 346


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 17/231 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-AVVNIACGQMCSMAVVDAGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P +V++    +V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
           LG      +S   P   I +    I+ I+A  +   SAA +  G++Y WG+
Sbjct: 289 LGTGNKSNQSYPTP---ISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQ 336



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 61  TTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 177 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNG 235

Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               G +      C  +    +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  +++EK       ++I+IAA
Sbjct: 296 NQSYPTPISVEK------DRIIEIAA 315


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 164/395 (41%), Gaps = 52/395 (13%)

Query: 82  LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
           +  PS  +   V +WG G  GQLG G   +    + +   D   Y ++ + AG  +S  +
Sbjct: 1   MAPPSRPVA--VLAWGSGEDGQLGMGGCDEKDRARCICALDA--YAVSAVVAGSRNSLAI 56

Query: 142 SDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
            D G LFT G    G LGH  + ++ SSP  V + V   + Q A G  H L +       
Sbjct: 57  CDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDK---G 113

Query: 201 QVYGFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
           + Y +G  + GQ G   +R         R + +PQ       +++  ++A G  S  L+ 
Sbjct: 114 RAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCA--LKLKVRQVAAGGTHSVVLTQ 171

Query: 253 EGHLYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           EGH++TWG+ +      +++ P  +      S  A+G  H L L+ D  +   G + +G 
Sbjct: 172 EGHVWTWGQPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRILWAWGNNEYGQ 231

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRL------F 361
           L     +  T+P S  + +V  L  + ++ IAAG  HSA +T +   + W R       F
Sbjct: 232 LG----IGDTQPRSQPI-RVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGF 286

Query: 362 IISYTPFFPPFFINVIA------------------ENRAIMTWGWGEHGQLGLGNTCDQI 403
               +    P  + ++A                   +  I ++G G+HG+LG G      
Sbjct: 287 GDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVTTG 346

Query: 404 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 438
           HP  V +        T  E    + +     RH L
Sbjct: 347 HPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTL 381



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 138/308 (44%), Gaps = 32/308 (10%)

Query: 36  VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++WG    G LG       E SP  ++      +   A GG H LA+        G+ +
Sbjct: 62  LFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDK-----GRAY 116

Query: 95  SWGRGSSGQLGHG-----EMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
           +WG    GQ G       +   AL    P+      +  +  ++AG  HS  ++  G ++
Sbjct: 117 AWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVW 176

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           T G         GD ++ S+PV+V     + V  IA G  H+L L  D +   ++ +G+ 
Sbjct: 177 TWGQ----PWPPGDIKNISTPVRVQGL--EQVSMIAVGAFHNLALSVDRI---LWAWGNN 227

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
           + GQLG+   + RS   P    GL ++ +V I+A G  SAAL+ EG +Y WGRG      
Sbjct: 228 EYGQLGIGDTQPRS--QPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLG 285

Query: 264 ----NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                S+  V     L +     Q + G  H +VLT DG +   G   HG L D  +V++
Sbjct: 286 FGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVTT 345

Query: 320 TRPLSVAL 327
             P+ V +
Sbjct: 346 GHPMEVPI 353



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 29/238 (12%)

Query: 35  KVWSWGAGTDGQLG---------TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTS 84
           + ++WG    GQ G         T  L  ++  PQ   L     V  +A GG H + LT 
Sbjct: 114 RAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKL--KVRQVAAGGTHSVVLTQ 171

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G V++WG+        G++ +   P  V   +     ++ I+ G  H+  +S  
Sbjct: 172 E-----GHVWTWGQ----PWPPGDIKNISTPVRVQGLE----QVSMIAVGAFHNLALSVD 218

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
             L+  G+  +GQLG GD +  S P++V    N ++  IA G  HS  L K+    +VY 
Sbjct: 219 RILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKE---GEVYA 275

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           +G G+ G+LG   D+   +   QV + L   +IV +S  G  S  L+++G ++++GRG
Sbjct: 276 WGRGEHGRLGFGDDKSSHMVPLQVQL-LAGEDIVQVSCGGTHSVVLTSDGRIFSYGRG 332


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 162/384 (42%), Gaps = 59/384 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
           +VW WG    GQLG G   D  +P  + +S L S V+ +A GG H  ALT       G V
Sbjct: 226 EVWCWGGNNYGQLGDGSYTDSSTP--VAVSGLPSGVTAIAAGGVHTCALTGS-----GGV 278

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
             WG   SGQLG+G       P  V+   G    +T I+AG  H+  ++ SG ++  G  
Sbjct: 279 RCWGANYSGQLGNGLTFGRSTPGAVS---GLPSGVTAIAAGDYHTCALTGSGGVWCWGGN 335

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G   + S+PV VS      V  IA G  H+  L+       V  +G   RGQL
Sbjct: 336 YSGQLGDGTTTARSTPVAVSGL-PSGVETIAAGDYHTCALMSS---GGVRCWGHNDRGQL 391

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
           G      RS   P    GL    +  I+A    + A ++ G ++ WG       G  S +
Sbjct: 392 GDGTTTARST--PVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFT 448

Query: 268 DVNCPQSLPSSLSFSQ--AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           D + P ++    S  +  AA GW H   LTG G V   G ++ G L D   +    P++ 
Sbjct: 449 DSSTPVAVSGLASGVETIAAGGW-HTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVA- 506

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
               VS L    V  IAAG  H+  +TG                          +  +  
Sbjct: 507 ----VSGLP-SGVTAIAAGGVHTCALTG--------------------------SGGVWC 535

Query: 386 WGWGEHGQLGLGNTCDQIHPKVVN 409
           WG    GQLG G T D+  P  V+
Sbjct: 536 WGGNFAGQLGDGTTTDRSTPVAVS 559



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 161/382 (42%), Gaps = 57/382 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    G+LG G   D  +P  + +S L S V+ +A GGAH  ALTS      G+V+
Sbjct: 74  VWCWGGNDFGRLGDGSYTDSSTP--VAVSGLPSGVTAIAAGGAHTCALTSS-----GEVW 126

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG    GQLG G       P  V+   G    +T I+AG  H+   + SG ++  G   
Sbjct: 127 CWGSNFYGQLGDGSYTTRSTPVAVS---GLPSGVTAIAAGGWHTCARTSSGGVWCWGGNY 183

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G     S+PV VS   ++ V  IA G  H+   +      +V+ +G    GQLG
Sbjct: 184 RGQLGDGTTTDRSTPVAVSGLPSE-VTAIAAGDAHTCARMSS---GEVWCWGGNNYGQLG 239

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCP 272
                    S P    GL    +  I+A G  + AL+  G +  WG  ++    + +   
Sbjct: 240 --DGSYTDSSTPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFG 296

Query: 273 QSLPSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
           +S P ++S      +  A G  H   LTG G V   GG++ G L D    + + P++V+ 
Sbjct: 297 RSTPGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVS- 355

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
                        + +G E   +  G +H   L                   +  +  WG
Sbjct: 356 ------------GLPSGVE--TIAAGDYHTCALM-----------------SSGGVRCWG 384

Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
             + GQLG G T  +  P  V+
Sbjct: 385 HNDRGQLGDGTTTARSTPVAVS 406



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 167/408 (40%), Gaps = 59/408 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    GQLG G      +P  + +S L S V  +A G  H  AL S      G V 
Sbjct: 329 VWCWGGNYSGQLGDGTTTARSTP--VAVSGLPSGVETIAAGDYHTCALMSS-----GGVR 381

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG    GQLG G       P  V+   G    +T I+AG  H+   + SG ++  GD +
Sbjct: 382 CWGHNDRGQLGDGTTTARSTPVAVS---GLPSGVTAIAAGRLHTCARTSSGGVWCWGDNS 438

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G +   S+PV VS   +  V  IA G  H+  L        V+ +G    GQLG
Sbjct: 439 DGQLGDGSFTDSSTPVAVSGLAS-GVETIAAGGWHTCALTGS---GGVWCWGRNNSGQLG 494

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
              D      +  V +      +  I+A G  + AL+  G ++ WG  F       +T+D
Sbjct: 495 ---DGSTIYHITPVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTD 551

Query: 269 VNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
            + P     LPS +  +  A G  H   LTG G V   GG+  G L D    + + P++ 
Sbjct: 552 RSTPVAVSGLPSGV--TAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVA- 608

Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH-WVRLFIIS----------YTPFFP---P 371
               VS L    V  IAAG  ++  +TG    W   + +S           TP      P
Sbjct: 609 ----VSGLP-SGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGLP 663

Query: 372 FFINVIA----------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
             +  IA           +  +  WG    GQLG G T  +  P  V+
Sbjct: 664 SGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVS 711



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 112/274 (40%), Gaps = 62/274 (22%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           VW WG    GQLG G     ++P  + +S L S V+ +A GG H  ALT       G V+
Sbjct: 482 VWCWGRNNSGQLGDGSTIYHITP--VAVSGLPSGVTAIAAGGVHTCALTGS-----GGVW 534

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            WG   +GQLG G   D   P  V+   G    +T I+AG  H+  ++ SG ++  G   
Sbjct: 535 CWGGNFAGQLGDGTTTDRSTPVAVS---GLPSGVTAIAAGDIHTCALTGSGGVWCWGGND 591

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD----CLGNQVYG------ 204
           FGQLG G   + S+PV VS      V  IA G+R++  L       C G  + G      
Sbjct: 592 FGQLGDGTTTNRSTPVAVSGL-PSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGT 650

Query: 205 -------------------------------------FGSGKRGQLGVSKDRIRSVSLPQ 227
                                                +G+   GQLG      RS   P 
Sbjct: 651 TSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRST--PV 708

Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
              GL    +  I+A G+ + AL + G ++ WGR
Sbjct: 709 AVSGLPS-GVTAIAAGGEHTCALMSSGGVWCWGR 741



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 10/146 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW WG    GQL  G         +  L S   V+ +A GG +  A TS      G V  
Sbjct: 635 VWCWGYNLSGQLDDGTTSRSTPVAVSGLPS--GVTAIAAGGWYTCARTSS-----GGVRC 687

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG   SGQLG G       P  V+   G    +T I+AG  H+  +  SG ++  G    
Sbjct: 688 WGANGSGQLGDGTTTKRSTPVAVS---GLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDS 744

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVH 181
           GQLG G     ++PV V +  +  V+
Sbjct: 745 GQLGDGRPLYRTTPVDVVTSASWGVY 770


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 120/245 (48%), Gaps = 25/245 (10%)

Query: 22  PKIEEEEEEQQVV-------KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC 74
           PK+++ E  Q           V + G G+ G+LG G   ++ +P+ L+  +   V  ++ 
Sbjct: 389 PKVQQLEAGQYCTFVIDNDGAVSACGKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISS 448

Query: 75  G---GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
                 H LALT     + G +FSWG G  G+LGHG +    YPK +      +  +  I
Sbjct: 449 SKGSDGHTLALT-----VEGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGK-VVKCI 502

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
            AG+ HS  V++ G L+T G+G FG+LGHGD    + P  V      NV Q+ACG  H++
Sbjct: 503 CAGYRHSAAVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDI--SNVGQVACGSSHTI 560

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            + +D  G  V+ FG GK G     +D  R V  P+V      + I  ++     S AL+
Sbjct: 561 AVSQD--GRTVWTFGGGKLG----FEDANR-VYRPKVVDAFAGLYIRKVACGSHSSLALT 613

Query: 252 AEGHL 256
           + G +
Sbjct: 614 SSGQV 618



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 28/279 (10%)

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           PS      V++WG  SS QL  G     L PK VT F      +  + AG   +  + + 
Sbjct: 352 PSDADSCVVYAWGSNSSHQLAEGTSEKILQPKLVTNFP----KVQQLEAGQYCTFVIDND 407

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQ 201
           G +  CG G++G+LG GD  + ++P K+S      V +I+       H+L L  +     
Sbjct: 408 GAVSACGKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVE---GA 464

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWG 260
           ++ +G G  G+LG     I +   P++  G    ++V     G R SAA++ +G LYTWG
Sbjct: 465 LFSWGDGDYGKLG--HGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWG 522

Query: 261 R------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGMLSD 313
                  G    S  N P  +    +  Q A G +H + ++ DG  V   GG   G   D
Sbjct: 523 EGDFGRLGHGDNSGRNVPTLVKDISNVGQVACGSSHTIAVSQDGRTVWTFGGGKLG-FED 581

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             RV   RP     + V    G+ + ++A G+  S  +T
Sbjct: 582 ANRV--YRP-----KVVDAFAGLYIRKVACGSHSSLALT 613


>gi|397614675|gb|EJK62945.1| hypothetical protein THAOC_16425, partial [Thalassiosira oceanica]
          Length = 619

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 183/426 (42%), Gaps = 81/426 (19%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLS---SVSMLACGG-----AHVLALTSPSSVI 89
           +WG G  GQLG G+  DE  P+L+ L S+     +  +A GG     AH L LTS     
Sbjct: 145 AWGVGARGQLGNGKREDEAEPKLM-LGSIGWGVRIVQVAAGGGLVRVAHSLLLTST---- 199

Query: 90  GGKVFSWGRGSSGQLGHG-----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
            G+V S+G    G LGHG      + D L PK +    G +  +  ++AG  HSG V++ 
Sbjct: 200 -GRVLSFGTAQYGALGHGYDQGKTLSDVLRPKYIEALRGEK--VVCVAAGELHSGAVTED 256

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           G ++T G+G  GQLG GD R H  P +V+     ++ V  I+ G RH+LV   D    +V
Sbjct: 257 GDVYTWGEGFCGQLGLGDRRPHLLPEQVTRGGLEDECVANISMGCRHTLVATDD---GEV 313

Query: 203 YGFGSGKRGQLGVS-KDRIRSVSLPQVTIGLHDIEIVGISANG------DRSAALSAEGH 255
           + +G G+ G LG S  D   +  +  V     D ++ G++A        +  A + A   
Sbjct: 314 FSWGLGRFGVLGRSYTDFTYNNDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQAAAE 373

Query: 256 -------LYTWGRGFNSTSDVNCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLM 302
                  L +     N T D    Q +P  +   +       + G  H +VL   G +  
Sbjct: 374 DGVPFDALISSLDALNLTLDDPSTQCIPGRVDALEGIRAVGVSAGHRHSMVLDEHGGLYT 433

Query: 303 LGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
            G    G L   +      P+ V A EK    D V++ Q++AG + S  V  + +     
Sbjct: 434 FGSGAGGALGHGDLFGQEFPVRVSAFEK----DAVEIHQMSAGVDVSMAVDTRGN----- 484

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQ 420
                                + +WG    G++GLG   + +  P+ V++GD        
Sbjct: 485 ---------------------VYSWGKRADGRIGLGIIEENVKVPRKVDVGDPLFR---A 520

Query: 421 LEVFCG 426
           ++V CG
Sbjct: 521 VDVECG 526



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 96/245 (39%), Gaps = 32/245 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKV 93
           V++WG G  GQLG G     L P+ +    L    V+ ++ G  H L  T       G+V
Sbjct: 259 VYTWGEGFCGQLGLGDRRPHLLPEQVTRGGLEDECVANISMGCRHTLVATDD-----GEV 313

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFF--DGHRYTITHISA---------------GWN 136
           FSWG G  G LG     D  Y   +     DG    +  ++A                  
Sbjct: 314 FSWGLGRFGVLGR-SYTDFTYNNDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQAAA 372

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
             G   D+  L +  D     L   D  +   P +V +        ++ G RHS+VL + 
Sbjct: 373 EDGVPFDA--LISSLDAL--NLTLDDPSTQCIPGRVDALEGIRAVGVSAGHRHSMVLDEH 428

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                +Y FGSG  G LG      +   +         +EI  +SA  D S A+   G++
Sbjct: 429 ---GGLYTFGSGAGGALGHGDLFGQEFPVRVSAFEKDAVEIHQMSAGVDVSMAVDTRGNV 485

Query: 257 YTWGR 261
           Y+WG+
Sbjct: 486 YSWGK 490



 Score = 41.6 bits (96), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G ++++G G+ G LGHG++    +P  V+ F+     I  +SAG + S  V   G +++ 
Sbjct: 429 GGLYTFGSGAGGALGHGDLFGQEFPVRVSAFEKDAVEIHQMSAGVDVSMAVDTRGNVYSW 488

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNK-----NVHQIACGMRHSLVL 193
           G    G++G G    +   VKV   V+          + CG  HS+++
Sbjct: 489 GKRADGRIGLGIIEEN---VKVPRKVDVGDPLFRAVDVECGYVHSVIV 533


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+S G  + GQLG  R  +   P+ +       + +++CG  H +A+        G+VF
Sbjct: 41  RVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCH-----KGRVF 95

Query: 95  SWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  +  L P  +    G +  I  +S G  HS  +S+ G +F+ G  
Sbjct: 96  AWGAGSEGQLGIGEFKEINLMPMRIKTLGGIK--IIQVSCGHYHSLALSEDGQVFSWGKN 153

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G    S +SP KV+S     + Q+A G  HS  L    L    YG+GS   GQ
Sbjct: 154 SQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFAL---SLTGTSYGWGSNSVGQ 210

Query: 213 LGVS-KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           L +S ++    +S P     L ++ ++ IS   + +A L+ +G ++T+G
Sbjct: 211 LALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFG 259



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 27/256 (10%)

Query: 111 DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
           D+  P+ +   DG    +   ++G  HS  +  +  +++CGD + GQLG    ++   P 
Sbjct: 8   DSRQPRRLNGRDG--LELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE 65

Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVT 229
            + +    ++  ++CG  HS+ +   C   +V+ +G+G  GQLG+ +   + ++L P   
Sbjct: 66  PIQALGTLDIDLVSCGKEHSIAV---CHKGRVFAWGAGSEGQLGIGE--FKEINLMPMRI 120

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQSLPS--SL 279
             L  I+I+ +S     S ALS +G +++WG+        G  S+S  + PQ + S   +
Sbjct: 121 KTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQAS-PQKVTSLEGI 179

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK-- 337
             +Q A G +H   L+  G     G +  G L+      S    +V + K  ++D +K  
Sbjct: 180 PLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLA-----LSGENSTVQISKPHSIDALKNL 234

Query: 338 -VIQIAAGAEHSAVVT 352
            VI I+ G EH+AV+T
Sbjct: 235 GVIYISCGYEHTAVLT 250



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 47/228 (20%), Positives = 78/228 (34%), Gaps = 80/228 (35%)

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
           Q A G RHSL+L  +   ++VY  G    GQLG  +++      P   +G  DI++V   
Sbjct: 25  QAASGERHSLLLFSN---HRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLV--- 78

Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
                                                      + G  H + +   G V 
Sbjct: 79  -------------------------------------------SCGKEHSIAVCHKGRVF 95

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G    G L     +   + +++   ++  L G+K+IQ++ G  HS             
Sbjct: 96  AWGAGSEGQLG----IGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLA----------- 140

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG-NTCDQIHPKVV 408
                          ++E+  + +WG    GQLGLG  +  Q  P+ V
Sbjct: 141 ---------------LSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKV 173


>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
          Length = 533

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 15/256 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++ G  +   LGT R    L P  ++ LS  + VS+    G HVLAL+       G+V
Sbjct: 42  ELYAIGTNSCSCLGTNRSQGTLEPSRIDTLSGRAIVSLAYGSGPHVLALSQ-----NGEV 96

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FSWG  + GQLG G     + P  V     GH   +  I+ G +HS  V+D G +F  G 
Sbjct: 97  FSWGHNAFGQLGLGSTTVGIAPSLVGDTLSGH--NVVQIACGSHHSVAVTDRGEIFAWGR 154

Query: 153 GTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQ+G G   +   P +V+   +N+ V  + CG   ++ L     G +V+ +G    G
Sbjct: 155 NSCGQVGIGSNVNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTD---GGEVFAWGFNGNG 211

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLG     + +   P + IGLH++ I  I+     S AL+ EG L+ WG         N 
Sbjct: 212 QLGAGN--LSNQHSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQLCANL 269

Query: 272 PQSLPSSLSFSQAALG 287
           P+S  +S     +ALG
Sbjct: 270 PRSNQTSPVLVASALG 285



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 12/239 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V+SWG    GQLG G     ++P L+ +  S  +V  +ACG  H +A+T       G++
Sbjct: 95  EVFSWGHNAFGQLGLGSTTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVTDR-----GEI 149

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F+WGR S GQ+G G  V+   P+ VT    +R+ +  +  G N +  ++D G +F  G  
Sbjct: 150 FAWGRNSCGQVGIGSNVNQDLPRQVTGHLLNRF-VRSVVCGQNSTMALTDGGEVFAWGFN 208

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G+  +  SP  V    N  + QIACG  HSL L  +    Q++ +GS   GQL
Sbjct: 209 GNGQLGAGNLSNQHSPALVIGLHNVVIEQIACGFAHSLALTDE---GQLFAWGSNTCGQL 265

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
             +  R    S   V   L  I  V      + + A++  G +Y WG+    T+   CP
Sbjct: 266 CANLPRSNQTSPVLVASALGRIIEVAAVHACNITVAVNQSGKVYMWGQVRGQTA--TCP 322



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 75/202 (37%), Gaps = 42/202 (20%)

Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN---HVL 292
           ++G  +  ++ EG LY  G       G N +     P  + +    +  +L +    HVL
Sbjct: 29  SSGSEAILVTKEGELYAIGTNSCSCLGTNRSQGTLEPSRIDTLSGRAIVSLAYGSGPHVL 88

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            L+ +GEV   G +  G L          P  V       L G  V+QIA G+ HS  VT
Sbjct: 89  ALSQNGEVFSWGHNAFGQLGLGSTTVGIAPSLVG----DTLSGHNVVQIACGSHHSVAVT 144

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
            +                            I  WG    GQ+G+G+  +Q  P+ V    
Sbjct: 145 DRGE--------------------------IFAWGRNSCGQVGIGSNVNQDLPRQVT--G 176

Query: 413 EFQNRDTQLEVFCGSGFTYAIS 434
              NR  +  V CG   T A++
Sbjct: 177 HLLNRFVR-SVVCGQNSTMALT 197


>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
 gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
 gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
 gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
          Length = 520

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 148/347 (42%), Gaps = 45/347 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S  ++ + ACG  H LALT       G VF
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 222

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 223 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCPE 280

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 281 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 340

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 341 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCS 394

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 395 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 454

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
              G L   +    +   S A ++V  LDG+   Q+A G  HS V+ 
Sbjct: 455 PTFGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIA 498



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 154/379 (40%), Gaps = 63/379 (16%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AH L +T+      GK++SWGR   GQLGHG+      P+ +         I   + G N
Sbjct: 158 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE--AIVLAACGRN 210

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           H+  ++D+G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++  
Sbjct: 211 HTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLM-- 267

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E  
Sbjct: 268 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 315

Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                     T D    Q LP  ++     A G NH LVL     V   G   +G L   
Sbjct: 316 ---------KTKDG---QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 363

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
           E+     P  V   K+ +  G    QI AG   S  V+   G F W        +  +P 
Sbjct: 364 EQKDEMVPRLV---KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 420

Query: 372 FFIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDEF 414
              +                ++A + + ++WG     G+LG G+      PK      E 
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 476

Query: 415 QNRDTQLEVFCGSGFTYAI 433
           +  D         G+++++
Sbjct: 477 KTLDGIFSEQVAMGYSHSL 495



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  + +  ++ +   ACG  H+L L   
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 219 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 273

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+       + Q  LG N       DG+ +        +  D E 
Sbjct: 274 YSFG----------CPE-------YGQ--LGHNS------DGKFIARA---QRIEYDCEL 305

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ V+  +                 
Sbjct: 306 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 346

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 347 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGA-TQIYAGYTCSF 395

Query: 432 AIS 434
           A+S
Sbjct: 396 AVS 398



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 330 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 384

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
           T I AG+  S  VS+ G LF                              CG        
Sbjct: 385 TQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAA 444

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 445 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 500


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 36/278 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG     QLG G  +  L+P L++ + LS  V+ +ACG  H +ALT+      G+V
Sbjct: 104 EVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTT-----DGEV 158

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG  +SGQ+G G   +   P+ V+    ++  + +I+ G   S  V D+G ++  G  
Sbjct: 159 YAWGYNNSGQVGSGSTANQPTPRRVSSCLQNK-VVVNIACGQLCSMAVLDNGEIYGWGYN 217

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G+  +  +P ++++    N+ Q+ACG  H+L L  +     VY +G+   GQL
Sbjct: 218 CNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGF---VYAWGANSYGQL 274

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG--RG------- 262
           G      +++  P   I      IV ++A      SAA +  G +  WG  RG       
Sbjct: 275 GTGNKSNQALPTP---INTDKERIVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVASPH 331

Query: 263 ---FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
              F+ST DV           F+  A+ W H+L + GD
Sbjct: 332 LTHFSSTDDV--------FACFATPAVTW-HLLSVDGD 360



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 28/294 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKV 93
           +V++ G    G LG G L   + P+ +++     +  L+ G G HV+  T+      G+V
Sbjct: 51  EVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATA-----DGEV 105

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++WG     QLG+G     L P  V T     R  +T ++ G +H+  ++  G ++  G 
Sbjct: 106 YAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKR--VTEVACGSHHTIALTTDGEVYAWGY 163

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQ+G G   +  +P +VSS + NK V  IACG   S+ +L +    ++YG+G    G
Sbjct: 164 NNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDN---GEIYGWGYNCNG 220

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV-- 269
           QLG+  +  +    P     L  + IV ++     + AL+ EG +Y WG   NS   +  
Sbjct: 221 QLGLGNNGNQQT--PCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGA--NSYGQLGT 276

Query: 270 --NCPQSLPSSLSFSQ------AALGWNHV-LVLTGDGEVLMLGGSHHGMLSDP 314
                Q+LP+ ++  +      AA   +H     T  G+VLM G      ++ P
Sbjct: 277 GNKSNQALPTPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVASP 330



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 123/327 (37%), Gaps = 83/327 (25%)

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCL 147
           +  +VF+ G   SG LG G++   + P+ +    G +  I  +S G   H    +  G +
Sbjct: 48  VNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKK--IVSLSYGTGPHVVIATADGEV 105

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +  G   + QLG+G      +P  VS+  ++K V ++ACG  H++ L  D    +VY +G
Sbjct: 106 YAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTD---GEVYAWG 162

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
               GQ+G S       +  +V+  L +  +V I+     S A+   G +Y WG   N  
Sbjct: 163 YNNSGQVG-SGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNG- 220

Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
                                               LG  ++G    P R+++       
Sbjct: 221 -----------------------------------QLGLGNNGNQQTPCRIAA------- 238

Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTW 386
                 L GV ++Q+A G  H+  +T                          +   +  W
Sbjct: 239 ------LQGVNIVQVACGYAHTLALT--------------------------DEGFVYAW 266

Query: 387 GWGEHGQLGLGNTCDQIHPKVVNLGDE 413
           G   +GQLG GN  +Q  P  +N   E
Sbjct: 267 GANSYGQLGTGNKSNQALPTPINTDKE 293


>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
          Length = 1011

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 57/316 (18%)

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WG+  + QL  G++     P+ V F     + ++++  G N +  ++D+G +++ G  
Sbjct: 192 YQWGQMFTTQLSLGKVST---PQTVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWGLC 248

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           ++G+LG         P ++    NK + QIACG  HSL L  D +G  VY +G+G  G+L
Sbjct: 249 SYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLAL--DEIGC-VYAWGNGAGGRL 305

Query: 214 GVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR----------- 261
           G++K  +  VSLP +     D +++VGI+   D S A+  +G +++WG+           
Sbjct: 306 GLNKTDV--VSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFGKLGYSNP 363

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            GF ST     P+ + S  +  Q + G  H L LT  G+V   G +  G          +
Sbjct: 364 MGFQST-----PRRVESIPACKQVSCGNWHSLTLTNGGDVYAFGSNREGRCGRELTTVES 418

Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
            P  V  +       +K+ +I AG   +AV+T                           +
Sbjct: 419 PPNRVIFDA-----NIKIKKIGAGLNFNAVLTT--------------------------S 447

Query: 381 RAIMTWGWGEHGQLGL 396
             I TWG  + GQLG+
Sbjct: 448 NMIYTWGNNDKGQLGV 463



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 149/354 (42%), Gaps = 58/354 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++SWG  + G+LG    +D   P Q++ L +   ++ +ACG  H LAL        G V+
Sbjct: 242 IYSWGLCSYGKLGQYSKNDCPIPSQIMELKN-KQITQIACGKDHSLALDEI-----GCVY 295

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G+ G+LG  +      P  V  F   +  +  I+ G +HS  V   G +F+ G   
Sbjct: 296 AWGNGAGGRLGLNKTDVVSLPTMVAHFPD-QVKVVGIACGQDHSMAVCQDGRVFSWGQAG 354

Query: 155 FGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           FG+LG+ +     S+P +V S       Q++CG  HSL L     G  VY FGS + G+ 
Sbjct: 355 FGKLGYSNPMGFQSTPRRVESI--PACKQVSCGNWHSLTLTN---GGDVYAFGSNREGRC 409

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------- 262
           G     + S   P   I   +I+I  I A  + +A L+    +YTWG             
Sbjct: 410 GRELTTVESP--PNRVIFDANIKIKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLGVLIET 467

Query: 263 ------------------------FNSTSDVNCPQSLPSSLSF--SQAALGWNHVLVLTG 296
                                    N T     PQ + + L +  +   +G+ HV+VLT 
Sbjct: 468 KSNSTNNSRNNNNNNNYISVYAATLNDTYTY-VPQLVKTLLPYPINNIEVGYEHVVVLTD 526

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
            GEV+  G +    L   E +      +    KV   +   V +IAAG   S V
Sbjct: 527 AGEVITFGSNQMDQLGHGELLRD----AGTFRKVEIQNKSTVFKIAAGNYASLV 576



 Score = 40.8 bits (94), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 34/196 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++G+  +G+ G      E  P  +   +   +  +  G      LT+        +++
Sbjct: 398 VYAFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTT-----SNMIYT 452

Query: 96  WGRGSSGQLG--------------------------HGEMVDALYPKPVTFFDGHRYTIT 129
           WG    GQLG                             + D     P        Y I 
Sbjct: 453 WGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLLPYPIN 512

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMR 188
           +I  G+ H   ++D+G + T G     QLGHG+    +   +     NK+ V +IA G  
Sbjct: 513 NIEVGYEHVVVLTDAGEVITFGSNQMDQLGHGELLRDAGTFRKVEIQNKSTVFKIAAGNY 572

Query: 189 HSLVLLKDCLGNQVYG 204
            SLV L    G+ ++G
Sbjct: 573 ASLVSLSS--GHSIFG 586



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 76/200 (38%), Gaps = 44/200 (22%)

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSAEGHLYTWGR----GFN 264
           GQ+  ++  +  VS PQ  +  H  E  +  +   G+ +  L+  G +Y+WG        
Sbjct: 195 GQMFTTQLSLGKVSTPQTVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWGLCSYGKLG 254

Query: 265 STSDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
             S  +CP  +PS +        +Q A G +H L L   G V   G    G L     ++
Sbjct: 255 QYSKNDCP--IPSQIMELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGGRLG----LN 308

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
            T  +S+        D VKV+ IA G +HS  V                           
Sbjct: 309 KTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAV--------------------------C 342

Query: 379 ENRAIMTWGWGEHGQLGLGN 398
           ++  + +WG    G+LG  N
Sbjct: 343 QDGRVFSWGQAGFGKLGYSN 362


>gi|406991558|gb|EKE11048.1| hypothetical protein ACD_15C00149G0001, partial [uncultured
           bacterium]
          Length = 1643

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 183/437 (41%), Gaps = 87/437 (19%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIG 90
           K WSWG  + GQLG   L +   P Q+L+  +   LS VS +  G  + +A  + S    
Sbjct: 491 KAWSWGYDSTGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSD--- 547

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFF---DGHRYTITHISAGWNHSGFVSDSGCL 147
           G V+SWG+   GQLG+   VD +   P++ +   +G+   +  +S+G  H+  +   G +
Sbjct: 548 GSVWSWGKNDKGQLGN-NTVDPVR-TPISTWGPANGNIPDVQSVSSGRYHTIALKTDGTV 605

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS---FVN-KNVHQIACGMRHSLVLLKDCLGNQVY 203
           +  G    GQLG    ++  +P++V     F N +N+ ++A G  HSL    D     V+
Sbjct: 606 WDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAGDYHSLARRSDG---TVW 662

Query: 204 GFGSGKRGQLGVS---KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            +G G  G+LG       R   V +           +V ISA  D S AL ++G ++ WG
Sbjct: 663 AWGRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVALRSDGTVWAWG 722

Query: 261 R------GFNSTSDVNCPQSLPSS------LSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
           +      G NST+  N P  +          + S  + G N VLV   DG V   G + +
Sbjct: 723 KNDRGQLGDNSTNYKNLPVQVLGVGGAGFLNNVSSISAGSNFVLVAKNDGTVFSWGHNAN 782

Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
           G L D        P+ V       L+   V  I+AG  HS                    
Sbjct: 783 GQLGDNTVSGKLTPIQV-------LNINNVSSISAGYAHSLA------------------ 817

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQ-IHPKVVNLGDEFQNRDTQLEVFCGS 427
                   +  + ++ +WGW  +GQLG G   D  + P              Q++   G+
Sbjct: 818 --------LKTDGSVWSWGWNGNGQLGEGTNIDNSLLP-------------LQVKNSTGT 856

Query: 428 GFTYAISR------HCL 438
           GF   IS+      HCL
Sbjct: 857 GFLSDISKIATGSNHCL 873



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 149/345 (43%), Gaps = 47/345 (13%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLN----LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           VW WG   +GQLGT    + L+P  +       +L ++  +A G  H LA  S      G
Sbjct: 605 VWDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAGDYHSLARRSD-----G 659

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCL 147
            V++WGRGS G+LG G  +   Y  PV   D    G    +  ISAG ++S  +   G +
Sbjct: 660 TVWAWGRGSLGELGDGTWISTRY-NPVQVKDAAGTGFLTNVVAISAGEDYSVALRSDGTV 718

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           +  G    GQLG       + PV+V     + F+N NV  I+ G    LV   D     V
Sbjct: 719 WAWGKNDRGQLGDNSTNYKNLPVQVLGVGGAGFLN-NVSSISAGSNFVLVAKNDG---TV 774

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G    GQLG   D   S  L  + + L+   +  ISA    S AL  +G +++W  G
Sbjct: 775 FSWGHNANGQLG---DNTVSGKLTPIQV-LNINNVSSISAGYAHSLALKTDGSVWSW--G 828

Query: 263 FNSTSDVNCPQSLPSSL---------------SFSQAALGWNHVLVLTGDGEVLMLGGSH 307
           +N    +    ++ +SL                 S+ A G NH LV+  D      G + 
Sbjct: 829 WNGNGQLGEGTNIDNSLLPLQVKNSTGTGFLSDISKIATGSNHCLVMKSDNTAFAWGLNG 888

Query: 308 HGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGAEHSAVV 351
           +G L +   V+   P+ V      S   GV  ++  AG  +S ++
Sbjct: 889 NGQLGNNSIVNKNLPVQVLNSNGSSGFTGVSFVE--AGFANSTII 931



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 154/343 (44%), Gaps = 44/343 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
           VWSWG  T GQLG   + ++  P Q+L +     LSSV+ ++ G ++ LA+ S      G
Sbjct: 324 VWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGASYALAVKSD-----G 378

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFT 149
            V +WG+  SGQLG+    D+  P  V   D  G+  +I  +SA   HS  +   G +++
Sbjct: 379 TVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMGNLSSIISVSADGTHSLSLKSDGTVWS 438

Query: 150 CGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G    GQLG   +    +PV+V     + F+  ++  IA G + SL +  D    + + 
Sbjct: 439 WGKNDKGQLGINSFIDKKTPVQVLDSTGTGFL-TDIVSIATGNKFSLAVKNDG---KAWS 494

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGDRSAA---LSAEGHLYTWG 260
           +G    GQLG +    RS+    +  G   ++  V     GD  A      ++G +++WG
Sbjct: 495 WGYDSTGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSDGSVWSWG 554

Query: 261 R------GFNSTSDVNCPQS--------LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
           +      G N+   V  P S        +P   S S       H + L  DG V   GG+
Sbjct: 555 KNDKGQLGNNTVDPVRTPISTWGPANGNIPDVQSVSSGRY---HTIALKTDGTVWDWGGN 611

Query: 307 HHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHS 348
            +G L      +   P+ V       NL+   ++++AAG  HS
Sbjct: 612 GNGQLGTTAGQNRLTPIQVRGPGGFGNLE--NIVEVAAGDYHS 652



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 144/336 (42%), Gaps = 49/336 (14%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
           VWSWG  T GQLG   L D  +P Q++       L+ + M++ G  H LAL S      G
Sbjct: 212 VWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYLNDIEMVSAGTNHSLALKSD-----G 266

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCL 147
            V+SWG   +GQLG+  +  +L   PV        G    +  +SAG  +S  +   G +
Sbjct: 267 TVWSWGNNDNGQLGNNLV--SLKNIPVQVVGPGGIGVLSNVISVSAGEGYSLALKSDGTV 324

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           ++ G  T GQLG         PV+V       F+  +V  I+ G  ++L +  D     V
Sbjct: 325 WSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFL-SSVASISAGASYALAVKSDG---TV 380

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI----EIVGISANGDRSAALSAEGHLYT 258
             +G    GQLG   +      +P   +G+  +     I+ +SA+G  S +L ++G +++
Sbjct: 381 VAWGKNDSGQLG--NNSYADSYVPVQVLGVDGMGNLSSIISVSADGTHSLSLKSDGTVWS 438

Query: 259 WGR------GFNSTSDVNCP-QSLPSS-----LSFSQAALGWNHVLVLTGDGEVLMLGGS 306
           WG+      G NS  D   P Q L S+           A G    L +  DG+    G  
Sbjct: 439 WGKNDKGQLGINSFIDKKTPVQVLDSTGTGFLTDIVSIATGNKFSLAVKNDGKAWSWGYD 498

Query: 307 HHGMLSDPERVSSTRPLSV-------ALEKVSNLDG 335
             G L D      + P  +        L +VS +DG
Sbjct: 499 STGQLGDNALTERSLPFQILDTGATGNLSQVSFIDG 534



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 58/301 (19%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQ 182
           +  ISAG +    +     +++ G+ T GQLG        +PV+V     S ++N ++  
Sbjct: 193 VAAISAGNSFVLAIKSDNSVWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYLN-DIEM 251

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI--EIVGI 240
           ++ G  HSL L  D     V+ +G+   GQLG +   ++++ +  V  G   +   ++ +
Sbjct: 252 VSAGTNHSLALKSDG---TVWSWGNNDNGQLGNNLVSLKNIPVQVVGPGGIGVLSNVISV 308

Query: 241 SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---------QSLPSSLSFSQAA 285
           SA    S AL ++G +++WG+      G N+  + + P         + L S  S S  A
Sbjct: 309 SAGEGYSLALKSDGTVWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGA 368

Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAG 344
              ++ L +  DG V+  G +  G L +     S  P+ V  ++ + NL    +I ++A 
Sbjct: 369 ---SYALAVKSDGTVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMGNLS--SIISVSAD 423

Query: 345 AEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH 404
             HS                            +  +  + +WG  + GQLG+ +  D+  
Sbjct: 424 GTHSL--------------------------SLKSDGTVWSWGKNDKGQLGINSFIDKKT 457

Query: 405 P 405
           P
Sbjct: 458 P 458


>gi|350580250|ref|XP_003480771.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           isoform 2 [Sus scrofa]
          Length = 379

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 134/318 (42%), Gaps = 51/318 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +F+WG  S GQLG G   D L P+ ++ F      +  I+ G  HS  V+D G LF CG 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVLLPQQLSEFC-KPGCVKRITGGGGHSAIVTDQGSLFVCGL 75

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G            S +   + Q+ACG   +++L K+    QV   GS   GQ
Sbjct: 76  NKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKN---GQVLSCGSNSFGQ 132

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
           LGV     R V +PQ  I +   ++V I+A    + A +A G ++ WG G  S+    CP
Sbjct: 133 LGVPHGPRRCV-VPQA-IEVQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCP 190

Query: 273 -QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            Q+LP           + L  SQA     G  H   LT  GE+ + G + HG L+     
Sbjct: 191 GQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLAS---Q 247

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           ++  PL   +E        KV  + +G  H    T                         
Sbjct: 248 AAFLPLPQKIE-AHRFQNEKVAAVWSGWTHLVAQT------------------------- 281

Query: 378 AENRAIMTWGWGEHGQLG 395
            E   + TWG  ++GQLG
Sbjct: 282 -ETGKVFTWGRADYGQLG 298



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 150/354 (42%), Gaps = 36/354 (10%)

Query: 28  EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
           E       +++WGA + GQLG G   D L PQ L+       V  +  GG H   +T   
Sbjct: 9   EAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTD-- 66

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
               G +F  G    GQLG G   D LY        G    I  ++ GW+ +  ++ +G 
Sbjct: 67  ---QGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLG--CPIQQVACGWDFTIILTKNGQ 121

Query: 147 LFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           + +CG  +FGQLG  HG  R      +      + V  IA G+RH+L      L  Q +G
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVP--QAIEVQREKVVSIAAGLRHALAATASGLVFQ-WG 178

Query: 205 FG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            G   SG+R   G +     +   P    GL + + V + A    SA+L+  G LY WG 
Sbjct: 179 TGLASSGRRLCPGQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGS 238

Query: 262 G-----FNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                  +  + +  PQ + +    +   +    GW H++  T  G+V   G + +G L 
Sbjct: 239 NKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298

Query: 313 ---------DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTGKF 355
                     P++ +S+ P S     V S+L  +    +++ G+EH+  V G  
Sbjct: 299 RTLESPEGWKPKKQASSLPCSRPARSVPSSLPCLTGATEVSCGSEHNLAVVGPL 352


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 48/348 (13%)

Query: 68   SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
            + + +A G +HVLA+ S      G V+SWGR   GQLG G   D   P+PV    G  + 
Sbjct: 851  TYTQVAAGDSHVLAIGS-----NGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFK 905

Query: 128  ITHISAGWNHSGFVSDSGCLFTCGDGTFGQ---LGHGDYRSHSSPVKVSSFVNKNVHQIA 184
               +SAG   S  +     ++T G  + G+     +   R + +P        + +H + 
Sbjct: 906  AVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQ 965

Query: 185  CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
              +  S V+  D  GN VY +G    GQLG       S +     +     +   ISA  
Sbjct: 966  VSLNWSFVMALDADGN-VYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGS 1024

Query: 245  DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS------SLSFSQAALGWNHVL 292
              + A+  +G+ +TWG       G  STSD   PQ++ +      SL  +Q + G +H L
Sbjct: 1025 WHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSL 1084

Query: 293  VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            V+  DG +   G + +G L     V+ T+P ++  +  +     K ++ +AG  HS    
Sbjct: 1085 VVDRDGSLWAWGWNSNGQLGIGNTVNQTKPATIK-DPANKAQTFKAVRSSAGQLHSLA-- 1141

Query: 353  GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
                                    I ++  +  WG  ++GQLG   T 
Sbjct: 1142 ------------------------IRQDGNLWAWGDNQYGQLGNNQTA 1165



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 151/378 (39%), Gaps = 56/378 (14%)

Query: 50   GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
            G  H  ++P  +N         ++ GG+  + + S      G  ++WG    GQL     
Sbjct: 777  GGQHVTITPPTINRGI--RFDQVSAGGSFSIGVAS-----DGNAYAWGNNKYGQLAQKPA 829

Query: 110  VDALYPKPV--TFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-- 163
              ++   PV     DG    +T T ++AG +H   +  +G +++ G    GQLG G    
Sbjct: 830  DVSMQKTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTD 889

Query: 164  RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS---GKRGQLGVSKDRI 220
            R +  PVK +        Q++ G+  S  +  +   N+VY +GS   GK      S  R 
Sbjct: 890  RYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSE---NRVYTWGSESTGKGQTPAYSTTRK 946

Query: 221  RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---------STSDVNC 271
                          +  V +S N     AL A+G++YTWG   N         STS  + 
Sbjct: 947  NPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASN 1006

Query: 272  PQSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
            P  LPS S   SQ + G  H L +  DG     G + +G L D       +P +V     
Sbjct: 1007 PARLPSQSFQASQISAGSWHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQ-NPT 1065

Query: 331  SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
                 +K  QI+AG +HS VV                            + ++  WGW  
Sbjct: 1066 DTSQSLKATQISAGVDHSLVVD--------------------------RDGSLWAWGWNS 1099

Query: 391  HGQLGLGNTCDQIHPKVV 408
            +GQLG+GNT +Q  P  +
Sbjct: 1100 NGQLGIGNTVNQTKPATI 1117



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 171/408 (41%), Gaps = 73/408 (17%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP----QLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
            ++SWG+   GQLG G   +   P    +   +S   +    + G    + L S      
Sbjct: 254 NLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQASAGYLFSVGLGS-----D 308

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLF 148
           GK++SWG  + GQLG+        P+PV         +T    + G  H+  +   G L+
Sbjct: 309 GKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVGSLHALGLGSDGNLY 368

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           + GD    QLG G      +P++V       S F  K   Q++    HSL L  D   N 
Sbjct: 369 SWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWK---QMSGWGWHSLALGSD---NW 422

Query: 202 VYGFGSGKRGQLG---VSKDRIRSVSL--PQVTIGLHDIEIVGISANGD-RSAALSAEGH 255
           +YG+G+  RG++G   ++ ++I  V +  PQ   G+      G    GD  S A+ ++G+
Sbjct: 423 IYGWGANTRGEVGTGSITDNKITPVRIATPQ---GVPSNFTWGQFQMGDYYSQAIGSDGN 479

Query: 256 LYTW------GRGFNSTSDVNCPQS-------LPSSLSFSQAALGWNHVLVLTGDGEVLM 302
           +YTW        G  ST DV  P         LP + S+ Q +L     L +  DG +  
Sbjct: 480 IYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLP-NFSWKQVSLLSVASLAIGSDGNLYS 538

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
            G +++G L D        P+ VA  + +   G+  +Q +AG ++++             
Sbjct: 539 WGANNNGQLGDNTTTQRNTPIRVAAPQNAPT-GLTWVQASAGWDNNSF------------ 585

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                         +A +  + +WG   +GQLG   T D+  P  VN+
Sbjct: 586 -------------GLASDGNLYSWGKNANGQLGDNTTNDRHIPGRVNM 620



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 138/334 (41%), Gaps = 39/334 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS--MLACGGAHVLALTSPSSVIGGKV 93
            V+SWG    GQLG G   D  +PQ +  +         ++ G A   A+ S +     +V
Sbjct: 871  VYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSEN-----RV 925

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCLFT 149
            ++WG  S+G+ G           P    D    G       +S  W+    +   G ++T
Sbjct: 926  YTWGSESTGK-GQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYT 984

Query: 150  CGDGTFGQLGHG-----DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
             G  T GQLG+G      Y S+ + +   SF      QI+ G  H+L +  D  GN  + 
Sbjct: 985  WGYNTNGQLGNGTSDSTSYASNPARLPSQSF---QASQISAGSWHALAI--DTDGN-TWT 1038

Query: 205  FGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            +G    GQL  G + D+ +  ++   T     ++   ISA  D S  +  +G L+ WG  
Sbjct: 1039 WGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAWGWN 1098

Query: 263  FN------------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
             N              + +  P +   +    +++ G  H L +  DG +   G + +G 
Sbjct: 1099 SNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDNQYGQ 1158

Query: 311  LSDPERVS-STRPLSVALEKVS-NLDGVKVIQIA 342
            L + +  + +T P+ VA +     L GV+   IA
Sbjct: 1159 LGNNQTATRNTTPMPVAFDPTPLVLTGVRFGGIA 1192



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 17/160 (10%)

Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVG 239
           Q++ G  H L +  D  GN +Y +GS   GQLG   + +R   V + +      D   V 
Sbjct: 238 QVSAGRGHILAVASD--GN-LYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQ 294

Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTS------DVNCPQSLPSSLSFSQAALG 287
            SA    S  L ++G LY+WG       G N+T+       VN PQ+ PS  ++ Q A+G
Sbjct: 295 ASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVG 354

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
             H L L  DG +   G + H  L D        P+ V +
Sbjct: 355 SLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKM 394



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
           P  + FSQ + G  H+L +  DG +   G + HG L D        P+ V   +  + D 
Sbjct: 231 PRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQD- 289

Query: 336 VKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
              +Q +AG               LF +             +  +  + +WG   +GQLG
Sbjct: 290 FTWVQASAG--------------YLFSVG------------LGSDGKLYSWGDNTYGQLG 323

Query: 396 LGNTCDQIHPKVVNL 410
              T     P+ VNL
Sbjct: 324 NNTTTAHYTPEPVNL 338


>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
           Kuenenia stuttgartiensis]
          Length = 387

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 176/421 (41%), Gaps = 69/421 (16%)

Query: 1   MVAPLMEETEKGKSALINNAKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDEL 56
           +V   +  T   K++      PKI         +K    +WSWG    GQLG G + ++ 
Sbjct: 19  LVVVFLVSTLAVKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNKH 78

Query: 57  SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
           SP  + +  LSS+ ++  G  H +AL S      G V++WG   +GQLG G    +  P 
Sbjct: 79  SP--VQVKHLSSIIVIDGGAWHSIALKSD-----GTVWAWGGNWAGQLGDGSYKSSNIPI 131

Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
                 G    I  IS G  H+  +   G ++  G    GQLG GD ++   P+++    
Sbjct: 132 KTKELSG----IIAISCGGQHNLALKSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGL- 186

Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHD 234
             N+  I+ G  HSL +  D     ++ +GS    QL  G + +R   V +  +      
Sbjct: 187 -NNIVAISAGGYHSLAIKSD---GSLWAWGSNNMEQLGDGSATNRCSPVHVSNLR----- 237

Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGW 288
            +I+ ++  GD S AL ++G +  WG       G  +T++ N P ++       + A   
Sbjct: 238 -DIIAVNGGGDFSLALKSDGTIMAWGSNGLSQLGDGTTTNRNTPVNVSDVRDIIEIAAKG 296

Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           NH L LT +G+V   G            + + RP  V + ++++     VI IA      
Sbjct: 297 NHSLALTIEGKVWEFGSIGATPTEKEVTLPAYRP--VLVNEITD-----VIAIAC----- 344

Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENR-AIMTWGWGEHGQLGLGNTCDQIHPKV 407
               G+FH                  NV+ +N  ++  WG    GQLG G    +  P +
Sbjct: 345 ----GEFH------------------NVVLKNDGSLWVWGINNFGQLGDGTVGSKTKPVL 382

Query: 408 V 408
           +
Sbjct: 383 I 383


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 178/425 (41%), Gaps = 84/425 (19%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++++WG    GQLG G    + SPQL+    + +V  +AC  +   A+        GK++
Sbjct: 31  QLYAWGWNNFGQLGIGNSISQYSPQLV---PIQNVLFVACKSSVSAAIDK-----SGKLY 82

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WGR   G LG+G++ +   P  V           +++ G  H   ++  G L+T G+  
Sbjct: 83  TWGRSKFGLLGNGQVENINIPTLVECL--KHLDFKYVACGNYHMAAITRDGQLYTWGNQD 140

Query: 155 FGQLGHG-------------DYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLG 199
            G+LGH              +Y+ +    K+   V  N  VHQ++ G + +L+L  D  G
Sbjct: 141 HGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDD--G 198

Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
           N VY  G  K+G LG        +S  Q++   +   I+ I +  D S AL ++G+++ W
Sbjct: 199 N-VYSVGLNKKGILGYETKNAEELSFKQIS---NLKNIIQIDSGTDFSVALDSDGNMFAW 254

Query: 260 GRGF------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           G  +       S S +  PQ +       Q + G   +  L+ DG +   G    G L  
Sbjct: 255 GSNYFGQLGTPSPSVIQTPQQIKGLPKIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGT 314

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
           P +     P  ++ +   N+D     +++ G  H                          
Sbjct: 315 PSKQDIPTPHKISFDH--NID-----KVSCGQAH-------------------------- 341

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCD-----QIHPKVVNLGDEFQNRDTQLEVFCGSG 428
           + +I+ N+  M  G G+ GQLG G+  +     +  P +V         +  L++ CG  
Sbjct: 342 VGIISNNKLYMH-GRGKEGQLGRGSETESPNSSRYSPLLV--------LENVLKIACGGS 392

Query: 429 FTYAI 433
            ++AI
Sbjct: 393 HSFAI 397



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 56/349 (16%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG    G LG G++ +   P L+          +ACG  H+ A+T       G+++
Sbjct: 80  KLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAAITRD-----GQLY 134

Query: 95  SWGRGSSGQLGHG-----------------EMVDALYPKPVTFFDGHRYTITHISAGWNH 137
           +WG    G+LGH                   +  A  P+ V       + +  +S G   
Sbjct: 135 TWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKL----NFKVHQVSLGDQF 190

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           +  +SD G +++ G    G LG+    +     K  S + KN+ QI  G   S+ L  D 
Sbjct: 191 TLILSDDGNVYSVGLNKKGILGYETKNAEELSFKQISNL-KNIIQIDSGTDFSVAL--DS 247

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
            GN ++ +GS   GQLG     +  +  PQ   GL  I+    S       ALSA+G LY
Sbjct: 248 DGN-MFAWGSNYFGQLGTPSPSV--IQTPQQIKGLPKIK--QFSCGEQFIGALSADGVLY 302

Query: 258 TWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
           TWG G +      S  D+  P  +    +  + + G  HV +++ + ++ M G    G L
Sbjct: 303 TWGFGGDGQLGTPSKQDIPTPHKISFDHNIDKVSCGQAHVGIIS-NNKLYMHGRGKEGQL 361

Query: 312 ---SDPERVSSTR--PLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTGK 354
              S+ E  +S+R  PL V LE         V++IA G  HS A+V  K
Sbjct: 362 GRGSETESPNSSRYSPLLV-LE--------NVLKIACGGSHSFAIVNQK 401



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 139/348 (39%), Gaps = 67/348 (19%)

Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           S FV     L+  G   FGQLG G+  S  SP  V     +NV  +AC    S  + K  
Sbjct: 23  SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QNVLFVACKSSVSAAIDKS- 78

Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
              ++Y +G  K G LG    ++ ++++P +   L  ++   ++      AA++ +G LY
Sbjct: 79  --GKLYTWGRSKFGLLG--NGQVENINIPTLVECLKHLDFKYVACGNYHMAAITRDGQLY 134

Query: 258 TWGR--------GFNSTSDV---------------NCPQSLPSSLSFSQAALGWNHVLVL 294
           TWG          F++ + +                 P+ +  +    Q +LG    L+L
Sbjct: 135 TWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLIL 194

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           + DG V  +G +  G+L       +     ++ +++SNL    +IQI +G + S  +   
Sbjct: 195 SDDGNVYSVGLNKKGILG----YETKNAEELSFKQISNLK--NIIQIDSGTDFSVALDSD 248

Query: 355 ---FHWVRLFI----------------ISYTPFFPPF-----FINVIAENRAIMTWGWGE 390
              F W   +                 I   P    F     FI  ++ +  + TWG+G 
Sbjct: 249 GNMFAWGSNYFGQLGTPSPSVIQTPQQIKGLPKIKQFSCGEQFIGALSADGVLYTWGFGG 308

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 438
            GQLG  +  D   P  ++      N D   +V CG      IS + L
Sbjct: 309 DGQLGTPSKQDIPTPHKISFD---HNID---KVSCGQAHVGIISNNKL 350


>gi|426367607|ref|XP_004050820.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Gorilla gorilla gorilla]
          Length = 458

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 161/392 (41%), Gaps = 70/392 (17%)

Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
           S GQLG G   D L P+ +  F   R ++  I+ G  HS  V+D G LF CG    GQLG
Sbjct: 24  SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82

Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
            G            S     + Q+ACG   +++L ++    QV   GS   GQLGV    
Sbjct: 83  LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVPHGP 139

Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSLP-- 276
            R V +PQ  I LH  ++V I+A    + A +A G ++ WG G  S     CP Q+LP  
Sbjct: 140 RRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLF 197

Query: 277 ---------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
                    + L  S+A     G +H   LT  GEV + G + HG L++    ++  P+ 
Sbjct: 198 FTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFLPVP 254

Query: 325 VALEKVSNLDGVKVIQIAAGAEH--SAVVTGK-FHWVR---------------------- 359
             +E        KV  I +G  H  +   TGK F W R                      
Sbjct: 255 QKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQD 313

Query: 360 -LFIISYTPFFPPFFINVIA----------ENRAIM-----TWGWGEHGQLGLGNTCDQI 403
                S  P   P  ++ I            N AI+     +WGW EHG  G G   +  
Sbjct: 314 SFLPCSRPPNSMPSSLHCITGATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGTEANVW 373

Query: 404 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
            PK V    +     + L V CG+G + A+ +
Sbjct: 374 APKPV----QALLSSSGLLVGCGAGHSLALCQ 401



 Score = 41.6 bits (96), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 23/177 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           +V+ WG+   GQL        + PQ +      +  V+ +  G  H++A T       GK
Sbjct: 232 EVYVWGSNKHGQLANEAAFLPV-PQKIEAHCFQNEKVTAIWSGWTHLVAQTET-----GK 285

Query: 93  VFSWGRGSSGQLGHG---------EMVDALYP--KPVTFFDGHRYTIT---HISAGWNHS 138
           +F+WGR   GQLG           E  D+  P  +P        + IT    +S G  H+
Sbjct: 286 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSLHCITGATEVSCGSEHN 345

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
                 G  ++ G    G  G G   +  +P  V + ++ +   + CG  HSL L +
Sbjct: 346 -LAIIGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDE-LSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           K++S G+   G+LG  +     +S  ++ L SSLSS+ ++   G    +L   ++   G+
Sbjct: 57  KLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTA---GE 113

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VFSWGR   GQLG G++      KP         T+  I+ G NH   ++D G LF+ G 
Sbjct: 114 VFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGC 173

Query: 153 GTFGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             +GQLG G   S H +P ++       + QIA G  HS +L        V+G+G    G
Sbjct: 174 NKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFIL---TWSRAVFGWGKNSFG 230

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG++ +  +  S P +   L + +++ IS   D + AL+ EG ++++G       G NS
Sbjct: 231 QLGLNDEYDK--SHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNS 288

Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLT 295
           T +   P+ +   +    SQ A G  H +  +
Sbjct: 289 TQNEILPKRVMELMGSVISQVACGRRHTVAFS 320



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 138/335 (41%), Gaps = 59/335 (17%)

Query: 93  VFSWGRGSSGQL--GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           VF WGR + GQL  G  E    L PK V+        I  IS G  H+  V+  G L++C
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRL--QELDIKEISCGEKHTLIVTKDGKLYSC 61

Query: 151 GDGTFGQLGHGDYRSHSSPVK----VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           G   +G+LGH   RS +  +     VSS  +  V Q A G   SLV+       +V+ +G
Sbjct: 62  GSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVI---TTAGEVFSWG 118

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
              +GQLG  K        P++   L    +V I+   +   AL+ +G L++WG      
Sbjct: 119 RNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQ 178

Query: 261 ------RGFNST-SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                   F+ T   + C + +P     +Q A G NH  +LT    V   G +  G L  
Sbjct: 179 LGLGSSHSFHDTPQQIVCLRGIP----IAQIASGGNHSFILTWSRAVFGWGKNSFGQLGL 234

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
            +    + P         +L   KV+ I+ G +H+  +T                     
Sbjct: 235 NDEYDKSHP-----TLCKSLRNQKVMYISCGEDHTVALT--------------------- 268

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                +   + ++G G  GQLG  +T ++I PK V
Sbjct: 269 -----KEGGVFSFGAGGFGQLGHNSTQNEILPKRV 298


>gi|395815365|ref|XP_003781199.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Otolemur garnettii]
          Length = 875

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 158/400 (39%), Gaps = 71/400 (17%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           GA + GQLG G   D L PQ LN       V  +  GG H   +T      GG +F  G 
Sbjct: 438 GANSYGQLGLGHKEDVLLPQQLNDFCKPRCVRRITGGGGHSAIVTD-----GGGLFVCGL 492

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG G   D LY  P     G    I  ++ GW+ +  ++++G + +CG  +FGQL
Sbjct: 493 NKDGQLGLGHTDDVLYFTPCKSLLG--CAIQQVACGWDFTIILTENGQVLSCGSNSFGQL 550

Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG-----SGKRG 211
           G  HG  R    P  +   + + V  IA G+RH+L      +   V+ +G     SG+R 
Sbjct: 551 GVPHGPRRC-VVPQAIE-LLREKVVCIAAGLRHALAAT---VSGIVFQWGTGLASSGRRL 605

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNST 266
             G +     +   P    GL + + V + A  D SA+L+  G +Y WG           
Sbjct: 606 CPGNALPLFLTAKEPSRVTGLENCKAVCVVAGSDHSASLTDAGEVYVWGSNKHGQLATQA 665

Query: 267 SDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----------- 311
           + +  PQ + +    ++       GW H++  T  G++   G + +G L           
Sbjct: 666 AFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKMFTWGRADYGQLGRTLESHEGWK 725

Query: 312 --SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
                  +  +RP +     +  L G    +++ G+EH+  V G                
Sbjct: 726 LEKQDSSLPCSRPQNSMPSSLHCLSGA--TEVSCGSEHNLAVIGG--------------- 768

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
                          +WGW EHG  G G   +   PK V 
Sbjct: 769 ------------TCYSWGWNEHGMCGDGTEDNIWAPKPVQ 796



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 83/205 (40%), Gaps = 27/205 (13%)

Query: 168 SPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           +P   S  + K+   I   M   RH L ++ D L       G+   GQLG+       V 
Sbjct: 402 NPYTRSIQILKDTKSITSAMDELRHDLDVISDALAK-----GANSYGQLGLGHKE--DVL 454

Query: 225 LPQVTIGLHDIEIVG-ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS 277
           LPQ          V  I+  G  SA ++  G L+  G       G   T DV       S
Sbjct: 455 LPQQLNDFCKPRCVRRITGGGGHSAIVTDGGGLFVCGLNKDGQLGLGHTDDVLYFTPCKS 514

Query: 278 SL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
            L  +  Q A GW+  ++LT +G+VL  G +  G L  P       P    + +   L  
Sbjct: 515 LLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPH-----GPRRCVVPQAIELLR 569

Query: 336 VKVIQIAAGAEH--SAVVTG-KFHW 357
            KV+ IAAG  H  +A V+G  F W
Sbjct: 570 EKVVCIAAGLRHALAATVSGIVFQW 594



 Score = 40.4 bits (93), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 23/175 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           +V+ WG+   GQL T      + PQ +      +  V+ +  G  H++A T       GK
Sbjct: 649 EVYVWGSNKHGQLATQAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTE-----TGK 702

Query: 93  VFSWGRGSSGQLGHG---------EMVDALYP--KPVTFFDGHRYTI---THISAGWNHS 138
           +F+WGR   GQLG           E  D+  P  +P        + +   T +S G  H+
Sbjct: 703 MFTWGRADYGQLGRTLESHEGWKLEKQDSSLPCSRPQNSMPSSLHCLSGATEVSCGSEHN 762

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
             V    C ++ G    G  G G   +  +P  V S  +     + CG  HSL L
Sbjct: 763 LAVIGGTC-YSWGWNEHGMCGDGTEDNIWAPKPVQSLWSSLALLVGCGAGHSLAL 816



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 31/201 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA-CGGAHVLALTSPSSVI--GGK 92
           V+ WG G     G         P  L     S V+ L  C    V+A +  S+ +   G+
Sbjct: 591 VFQWGTGLASS-GRRLCPGNALPLFLTAKEPSRVTGLENCKAVCVVAGSDHSASLTDAGE 649

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY---TITHISAGWNHSGFVSDSGCLFT 149
           V+ WG    GQL       A  P P    + H +    +T + +GW H    +++G +FT
Sbjct: 650 VYVWGSNKHGQLA---TQAAFLPVPQKI-EAHCFQNEKVTAVWSGWTHLVAQTETGKMFT 705

Query: 150 CGDGTFGQLGHG---------DYRSHSSPV-KVSSFVNKNVH------QIACGMRHSLVL 193
            G   +GQLG           + +  S P  +  + +  ++H      +++CG  H+L +
Sbjct: 706 WGRADYGQLGRTLESHEGWKLEKQDSSLPCSRPQNSMPSSLHCLSGATEVSCGSEHNLAV 765

Query: 194 LKDCLGNQVYGFGSGKRGQLG 214
               +G   Y +G  + G  G
Sbjct: 766 ----IGGTCYSWGWNEHGMCG 782


>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Nomascus leucogenys]
          Length = 704

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 137/312 (43%), Gaps = 48/312 (15%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           H+S G  HS  V+ +  L+  G   +GQLG G   + S P  V +   + V   ACG  H
Sbjct: 39  HLSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
            LV  +   G  VY  G    GQLG+     R+ +   ++    + +I  +SA  + SAA
Sbjct: 99  ILVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           ++ +G L+ WG+      G  +  +V  PQ +      S  + G+ H   +T DGE+ + 
Sbjct: 155 VTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G   +G L  P ++         + ++      KVIQ+A G EH+ V+T           
Sbjct: 215 GEPENGKLGLPSQLLGNHRTPQLVSEIPE----KVIQVARGGEHTVVLT----------- 259

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
                          EN A+ T+G G+ GQLGLG    +   PKV+ N+ D+     T  
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298

Query: 422 EVFCGSGFTYAI 433
            + CG   T  I
Sbjct: 299 YISCGENHTALI 310



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H+L  T      GG V+
Sbjct: 55  KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHILVSTE-----GGNVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  + GQLG G+  +      ++FF    + I  +SAG N S  V++ G LF  G  +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAAVTEDGRLFMWGKNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K V  I+CG  HS  +  D    ++Y FG  + G+LG
Sbjct: 169 EGQIGLKNVPNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +    + +   PQ+   + + +++ ++  G+ +  L+ E  +YT+G G            
Sbjct: 224 LPSQLLGNHRTPQLVSEIPE-KVIQVARGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    +++    + S  + G NH  ++   G +   G S HG L
Sbjct: 282 ETSEPKVIENI-RDQTISYISCGENHTALIRDIGLMYTFGNSRHGKL 327



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++ +G   +G+LG  +  L +  +PQL++      V  +A GG H + LT         
Sbjct: 210 ELYVFGEPENGKLGLPSQLLGNHRTPQLVS-EIPEKVIQVARGGEHTVVLTE------NA 262

Query: 93  VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK +        TI++IS G NH+  + D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALIRDIGLMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           +   G+LG G  ++ +H  P   S F+   V  +ACG  H +V 
Sbjct: 321 NSRHGKLGLGLENFTNHFIPTLCSDFLRFIVKLVACGGCHMVVF 364



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 93/182 (51%), Gaps = 13/182 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG  ++GQ+G   + +   PQ + +     VS ++CG  H   +T+      G+++
Sbjct: 160 RLFMWGKNSEGQIGLKNVPNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +G   +G+LG    +   +  P    +     I  ++ G  H+  ++++  ++T G G 
Sbjct: 213 VFGEPENGKLGLPSQLLGNHRTPQLVSEIPEKVI-QVARGGEHTVVLTENA-VYTFGLGQ 270

Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           FGQLG G +   +S P  + +  ++ +  I+CG  H+  L++D     +Y FG+ + G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHT-ALIRDI--GLMYTFGNSRHGKL 327

Query: 214 GV 215
           G+
Sbjct: 328 GL 329


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 157/363 (43%), Gaps = 70/363 (19%)

Query: 93  VFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           + +WG G  GQLG G         +V+AL P          Y++  + +G  +S  + D 
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEP----------YSVRSVVSGSRNSLAICDD 56

Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           G +FT G    G LGH  + ++ + P +V +  N  + Q A G  H L +       + Y
Sbjct: 57  GTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ---GRAY 113

Query: 204 GFGSGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
            +G  + GQ G    KD +     R + +P+       + +  ++A G  S  L+ EGH+
Sbjct: 114 AWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVAAGGTHSVVLTREGHV 171

Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
           +TWG+ +       +  P  +    + S  A+G  H L L  DG +L  G + +G L   
Sbjct: 172 WTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG 231

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFI 374
           +   ++ P+ V       LD + ++ IAAG  HS  +T K                    
Sbjct: 232 DTQPTSHPVPV-----HGLDDLTLVDIAAGGWHSTALTDKGE------------------ 268

Query: 375 NVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                   +  WG GEHG+LG G+     ++ P+ VNL  E    +  ++V CG   + A
Sbjct: 269 --------VYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAE----EDIIQVSCGGTHSVA 316

Query: 433 ISR 435
           ++R
Sbjct: 317 LTR 319



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 135/307 (43%), Gaps = 34/307 (11%)

Query: 38  SWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +WG    G LG       E  P  +   +   ++  A GG H LA+        G+ ++W
Sbjct: 61  TWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ-----GRAYAW 115

Query: 97  GRGSSGQLGHGEMVDALYPKPVTF------FDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G    GQ G   + D +  +PV            + T+  ++AG  HS  ++  G ++T 
Sbjct: 116 GGNEYGQCGEEPLKDEMG-RPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTW 174

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G         GD +    PV+V     +NV  IA G  H+L L +D    ++  +G+ + 
Sbjct: 175 GQ----PWPPGDIKQIFVPVRVQGL--ENVSIIAVGAFHNLALEED---GRLLAWGNNEY 225

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------- 263
           GQLG    +  S  +P    GL D+ +V I+A G  S AL+ +G +Y WGRG        
Sbjct: 226 GQLGTGDTQPTSHPVP--VHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFG 283

Query: 264 -NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
            N  S    PQ  +L +     Q + G  H + LT DG +   G   HG L    +V++ 
Sbjct: 284 DNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTG 343

Query: 321 RPLSVAL 327
           +PL + +
Sbjct: 344 QPLELPI 350



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 23/235 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-------LSSLSSVSMLACGGAHVLALTSPSS 87
           + ++WG    GQ G   L DE+   +          +   +V  +A GG H + LT    
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE-- 168

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              G V++WG+        G++     P  V   +     ++ I+ G  H+  + + G L
Sbjct: 169 ---GHVWTWGQ----PWPPGDIKQIFVPVRVQGLE----NVSIIAVGAFHNLALEEDGRL 217

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
              G+  +GQLG GD +  S PV V    +  +  IA G  HS  L       +VYG+G 
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDK---GEVYGWGR 274

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           G+ G+LG   +   S  +PQ    L + +I+ +S  G  S AL+ +G ++++GRG
Sbjct: 275 GEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRG 329



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 27/180 (15%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ +WG    GQLGTG       P  ++ L  L+ V  +A GG H  ALT       G+V
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVD-IAAGGWHSTALTDK-----GEV 269

Query: 94  FSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           + WGRG  G+LG G+      + P+ V         I  +S G  HS  ++  G +F+ G
Sbjct: 270 YGWGRGEHGRLGFGDNDKSSKMVPQKVNLL--AEEDIIQVSCGGTHSVALTRDGRIFSFG 327

Query: 152 DGTFGQLGHGDYRSHSSPVKVS--------SFVNKNVHQ--------IACGMRHSLVLLK 195
            G  G+LG+G   +   P+++         SF + +  +        IACG RH+L +++
Sbjct: 328 RGDHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVE 387


>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
 gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
          Length = 538

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 15/258 (5%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++SWG     QLG G  +  LSPQL+  + +   V  +ACG  H LALT     + G+VF
Sbjct: 103 LYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALT-----LEGEVF 157

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG  + GQ+G G   +   P+ V    G R  +T I+ G   S  + D+G ++  G   
Sbjct: 158 AWGYNNCGQVGSGTTTNQATPRKVAACLGTR-KVTEIACGQTSSMALLDNGEVYGWGYNG 216

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G+  +  +P +V++     V QI CG  H++ L  +     VY +G+   GQLG
Sbjct: 217 NGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDE---GSVYAWGANSYGQLG 273

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RGFNSTSDVNCP 272
            + ++   V+  ++ +       +G +     S+A++  G +Y WG  RG + TS +   
Sbjct: 274 -TGNKANLVTPTKIALDKGRFVEIGATHYNHVSSAITQTGKVYMWGQCRGQSITSPMETR 332

Query: 273 QSL--PSSLSFSQAALGW 288
            S    +   FS  A+ W
Sbjct: 333 FSTVDDAFACFSMPAVTW 350



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 24/291 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKVF 94
           V++ G+     LG G     L P+ +++     +  +  G G HVL  T       G ++
Sbjct: 50  VYALGSNCSSCLGVGDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCTD-----NGDLY 104

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           SWG     QLG+G     L P+ +T    G +  +  ++ G +HS  ++  G +F  G  
Sbjct: 105 SWGHNGYSQLGNGSTNQGLSPQLITTNLIGRK--VVKVACGSHHSLALTLEGEVFAWGYN 162

Query: 154 TFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQ+G G   + ++P KV++ +  + V +IACG   S+ LL +    +VYG+G    GQ
Sbjct: 163 NCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDN---GEVYGWGYNGNGQ 219

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
           LGV  +  +    P     L  + +V I      + AL+ EG +Y WG       G  + 
Sbjct: 220 LGVGNNVNQPN--PCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNK 277

Query: 267 SDVNCPQ--SLPSSLSFSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDP 314
           +++  P   +L         A  +NHV   +T  G+V M G      ++ P
Sbjct: 278 ANLVTPTKIALDKGRFVEIGATHYNHVSSAITQTGKVYMWGQCRGQSITSP 328



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLS-SLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG    GQ+G+G   ++ +P+ +        V+ +ACG    +AL        G+V
Sbjct: 155 EVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLD-----NGEV 209

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + WG   +GQLG G  V+   P P       +  +  I  G+ H+  ++D G ++  G  
Sbjct: 210 YGWGYNGNGQLGVGNNVNQ--PNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGAN 267

Query: 154 TFGQLGHGDYRSHSSPVKVS 173
           ++GQLG G+  +  +P K++
Sbjct: 268 SYGQLGTGNKANLVTPTKIA 287



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 110/284 (38%), Gaps = 43/284 (15%)

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           N +  ++    ++  G      LG GD +S   P K+     K +  I  G    +++  
Sbjct: 39  NEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCT 98

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           D     +Y +G     QLG      + +S   +T  L   ++V ++     S AL+ EG 
Sbjct: 99  D--NGDLYSWGHNGYSQLGNGSTN-QGLSPQLITTNLIGRKVVKVACGSHHSLALTLEGE 155

Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGS 306
           ++ WG       G  +T++   P+ + + L     ++ A G    + L  +GEV   G +
Sbjct: 156 VFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGYN 215

Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
            +G L     V+   P  VA      L  + V+QI  G  H+  +T              
Sbjct: 216 GNGQLGVGNNVNQPNPCRVAA-----LQQMIVVQIVCGYAHAMALT-------------- 256

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
                       +  ++  WG   +GQLG GN  + + P  + L
Sbjct: 257 ------------DEGSVYAWGANSYGQLGTGNKANLVTPTKIAL 288



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 10/112 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG   +GQLG G   ++ +P  +       V  + CG AH +ALT       G V+
Sbjct: 208 EVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDE-----GSVY 262

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI-----THISAGWNHSGFV 141
           +WG  S GQLG G   + + P  +    G    I      H+S+    +G V
Sbjct: 263 AWGANSYGQLGTGNKANLVTPTKIALDKGRFVEIGATHYNHVSSAITQTGKV 314


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 172/429 (40%), Gaps = 83/429 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V +WG+G DGQLG G   +E   + +      +VS +  G  + LA+ +      G++F+
Sbjct: 13  VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICAD-----GRLFT 67

Query: 96  WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG    G LGH  E      P PV    G   +I   + G  H   V D G  +  G   
Sbjct: 68  WGWNQRGTLGHPPETKTESSPAPVDALAG--VSIVQAAIGGWHCLAVDDKGRAYAWGGNE 125

Query: 155 FGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +GQ G    R            P+         V Q+A G  HS+VL +D     V+ +G
Sbjct: 126 YGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQD---GHVWTWG 182

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
                Q     D I+ +S P    GL +++++ + A    + AL+ +G L+ WG    G 
Sbjct: 183 -----QPWPPGD-IKQISTPVRVQGLENVKVIAVGAF--HNLALTEDGILWAWGNNEYGQ 234

Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             T D   P+S P      S LS    A G  H   LT +GEV   G   HG L   +  
Sbjct: 235 LGTGDTQ-PRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDK 293

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           SS     +  +KV  L G  +IQ++ G  HS  +T                         
Sbjct: 294 SS----HMVPQKVELLAGEDIIQVSCGGTHSVALT------------------------- 324

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL------------GDEFQNRDTQLEVFC 425
             +  + ++G G+HG+LG G      HP  V +            G ++Q R     V C
Sbjct: 325 -RDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQAR----YVAC 379

Query: 426 GSGFTYAIS 434
           G   T AI+
Sbjct: 380 GGRHTLAIA 388



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 155/363 (42%), Gaps = 54/363 (14%)

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           P+S +   V +WG G  GQLG G   +  + + V   D     ++ + AG  +S  +   
Sbjct: 5   PASSLPTAVLAWGSGEDGQLGMGGYEEEDWARGVAALDA--LAVSAVVAGSRNSLAICAD 62

Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           G LFT G    G LGH  + ++ SSP  V +    ++ Q A G  H L +       + Y
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK---GRAY 119

Query: 204 GFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
            +G  + GQ G   +R         R + +PQ       +++  ++A G  S  L+ +GH
Sbjct: 120 AWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCA--PKLKVRQVAAGGTHSVVLTQDGH 177

Query: 256 LYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           ++TWG+ +       ++ P  +    +    A+G  H L LT DG +   G + +G L  
Sbjct: 178 VWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGT 237

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
            +    ++P+     +V  L  + ++ IAAG  HS  +T                     
Sbjct: 238 GDTQPRSQPI-----RVEGLSDLSLVDIAAGGWHSTALT--------------------- 271

Query: 374 INVIAENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG GEHG+LG G +    + P+ V L       D  ++V CG   + A
Sbjct: 272 -----KEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVEL---LAGEDI-IQVSCGGTHSVA 322

Query: 433 ISR 435
           ++R
Sbjct: 323 LTR 325



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 32/310 (10%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    G LG       E SP  ++  +  S+   A GG H LA+        G+ 
Sbjct: 64  RLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK-----GRA 118

Query: 94  FSWGRGSSGQLGHG-----EMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           ++WG    GQ G       +   AL    P+      +  +  ++AG  HS  ++  G +
Sbjct: 119 YAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHV 178

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           +T G         GD +  S+PV+V     +NV  IA G  H+L L +D +   ++ +G+
Sbjct: 179 WTWGQ----PWPPGDIKQISTPVRVQGL--ENVKVIAVGAFHNLALTEDGI---LWAWGN 229

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + GQLG    + RS   P    GL D+ +V I+A G  S AL+ EG +Y WGRG     
Sbjct: 230 NEYGQLGTGDTQPRS--QPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRL 287

Query: 264 ---NSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              +  S    PQ   L +     Q + G  H + LT DG +   G   HG L    +V+
Sbjct: 288 GFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVT 347

Query: 319 STRPLSVALE 328
           +  P+ V ++
Sbjct: 348 TGHPMEVPID 357


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  100 bits (250), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 98/378 (25%), Positives = 173/378 (45%), Gaps = 52/378 (13%)

Query: 92  KVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++FSWG   +GQLG G+  +   YP P   +  +   I ++S G  H+ F++    +++ 
Sbjct: 83  EIFSWGSDQAGQLGLGQSQIGKSYPVPR--YCTYNIGIKYVSCGDEHAAFITTGNMVYSM 140

Query: 151 GDGTFGQLGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           G  T GQLG GD   +  +SP+ V + +++    IACG  H+LV  +      VY +G G
Sbjct: 141 GSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTER---GDVYSWGQG 197

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHD-----IEIVGISANGDRSAALSAEGHLYTWGR-- 261
             G LG     +    LP++    HD      +++ +SA    SA L   G +YT G+  
Sbjct: 198 IFGALGAGN--LDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQND 255

Query: 262 ----GFNSTSDVNCPQSL---PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
               G       N P S+   P  +S    A G  H+L+LT  G V   G +  G L   
Sbjct: 256 AGQLGIGGRDQENIPISIKKFPERVSM--IACGQMHLLMLTKQGTVYSCGANSFGQLGLN 313

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV-------------VTGKF---HWV 358
            + +S+ PL      + ++  + +  +AAG+  +++             V G+F   H V
Sbjct: 314 NKRNSSSPL-----LIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEFLTPHRV 368

Query: 359 RLFI-ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
           +    ++ +      F   + ++  + +WG    G+LG G+  ++  P+++N   +  ++
Sbjct: 369 KTIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTPQIIN---QLNDK 425

Query: 418 DTQLEVFCGSGFTYAISR 435
              L V CG  F+ A+ +
Sbjct: 426 IVTL-VSCGRNFSIALGQ 442



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 75/282 (26%), Positives = 115/282 (40%), Gaps = 61/282 (21%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIG--- 90
           +++SWG+   GQLG G+     S  +    + +  +  ++CG  H   +T+ + V     
Sbjct: 83  EIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGS 142

Query: 91  ----------------------------------------------GKVFSWGRGSSGQL 104
                                                         G V+SWG+G  G L
Sbjct: 143 NTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFGAL 202

Query: 105 GHGEMVDALYPKPVTFFDGHRYT---ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
           G G + D   PK +        T   +  +SAG   S  +  SG ++TCG    GQLG G
Sbjct: 203 GAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQLGIG 262

Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
                + P+ +  F  + V  IACG  H L+L K      VY  G+   GQLG++    R
Sbjct: 263 GRDQENIPISIKKFPER-VSMIACGQMHLLMLTKQ---GTVYSCGANSFGQLGLNNK--R 316

Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGRG 262
           + S P +   +  I +  ++A G  SA++S + G LY WG G
Sbjct: 317 NSSSPLLIQDISHIPMRYVAA-GSFSASISYDSGDLYLWGSG 357



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 29/231 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLS--SLSSVSML--ACGGAHVLALTSPSSVIGG 91
           V+SWG G  G LG G L D+  P+L+++S   LS+ S +     G    A+   S    G
Sbjct: 191 VYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQS----G 246

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +V++ G+  +GQLG G       P  +  F      ++ I+ G  H   ++  G +++CG
Sbjct: 247 RVYTCGQNDAGQLGIGGRDQENIPISIKKFPER---VSMIACGQMHLLMLTKQGTVYSCG 303

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             +FGQLG  + R+ SSP+ +    +  +  +A G   + +         +Y +GSG  G
Sbjct: 304 ANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDS---GDLYLWGSGVFG 360

Query: 212 QLGVSKDRIRSVS--LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +  ++  R++++      V+IG H     GI+ N D        G +Y+WG
Sbjct: 361 EF-LTPHRVKTIKGMTVSVSIGNH----FGIAVNQD--------GIVYSWG 398



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 79/206 (38%), Gaps = 53/206 (25%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIG 90
           Q  +V++ G    GQLG G    E  P  +++      VSM+ACG  H+L LT       
Sbjct: 244 QSGRVYTCGQNDAGQLGIGGRDQENIP--ISIKKFPERVSMIACGQMHLLMLTKQ----- 296

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G V+S G  S GQLG     ++    P+   D     + +++AG   +    DSG L+  
Sbjct: 297 GTVYSCGANSFGQLGLNNKRNS--SSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLW 354

Query: 151 GDGTFGQ-------------------------------------------LGHGDYRSHS 167
           G G FG+                                           LG GD+    
Sbjct: 355 GSGVFGEFLTPHRVKTIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERP 414

Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVL 193
           +P  ++   +K V  ++CG   S+ L
Sbjct: 415 TPQIINQLNDKIVTLVSCGRNFSIAL 440


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 181/430 (42%), Gaps = 81/430 (18%)

Query: 34   VKVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAH--VLALTSPSSVIG 90
            + V+SWG      LG G  +     P+++   S   ++ +ACG  H  VL  +S      
Sbjct: 1013 LNVYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNA 1072

Query: 91   GKVFSWGRGSSGQLGH--GEMVDAL-----------------YPKPVTFFDGHRYTITHI 131
            G VF++G G+SG+LG+      D L                  P+PV    G R  I  I
Sbjct: 1073 GTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSI 1132

Query: 132  SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRH 189
            + G NH+   +  GC+++ G G +G LG G   +  +PVKV  F + N+    C  G RH
Sbjct: 1133 ACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKV-VFPSDNIFISKCCAGSRH 1191

Query: 190  SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
            S+ L K+  GN V+ +G G  G+LG+     R+   P +       E+  IS     SA 
Sbjct: 1192 SMALDKE--GN-VWSWGYGGNGRLGLGS--TRNYYTPNLIRIFDTYEVFQISCGDSHSAC 1246

Query: 250  LSAEGHLYTWG--RG-----FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEV 300
            L   G +YTWG  RG         SDV  P  + S       Q A G  + L L+  G++
Sbjct: 1247 LDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKI 1306

Query: 301  LMLGGS------HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
               G +        G++S+ + V    P +          G K + IAAG    A     
Sbjct: 1307 YQWGCTLGFNKQSEGLISNIDYVPQPVPDT----------GFKNVFIAAGPYSCAA---- 1352

Query: 355  FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
                               IN+  +   ++TWG G   +LG G++ D + PK V+     
Sbjct: 1353 -------------------INIFGD---LLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTR 1390

Query: 415  QNRDTQLEVF 424
               DT L+V+
Sbjct: 1391 IYIDTLLKVY 1400



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 43/342 (12%)

Query: 36   VWSWGA--GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
            V++WG   GT       ++     P L N  S S +S +ACG  H LA+T     + G +
Sbjct: 1443 VYTWGVNNGTGYNSTKDQIESYSEPMLFNHFS-SKISKIACGSNHSLAIT-----VNGLL 1496

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV----------SD 143
            F+WG   +GQLG G++   + P  V + +       ++ AG ++SG +           D
Sbjct: 1497 FTWGCNDNGQLGQGDLRSRVIPDHVPYIEN----CINVFAGVDNSGCICSSNHEDFMKDD 1552

Query: 144  SGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
             G L+  G  + G+LG G+  + +  +P ++++     V+++A G  HS+VL  +     
Sbjct: 1553 YGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTG--VYKLALGTMHSVVLTHE---GS 1607

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            +Y  G+G  G+LG        V  P  T    +++ V + A    S A+S +  LY WG 
Sbjct: 1608 LYSAGAGTGGRLGTGDTSNYFVFTPVKT----EVKFVDVCAGSSHSLAISVDNELYGWGE 1663

Query: 262  GFNSTSDVN------CPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
            G    SD          + +PS    ++   A    NH LVLT  G V   G + +G L 
Sbjct: 1664 GKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQLG 1723

Query: 313  DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
                + S+    + +    NLD   V  IA     S+  T K
Sbjct: 1724 VQLSIKSSANNFIKMPSTVNLDA-NVTCIATSRYFSSCSTLK 1764



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 143/366 (39%), Gaps = 65/366 (17%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLL--------------------------------NL 63
            + +WG GT  +LG G   D ++P+ +                                N 
Sbjct: 1359 LLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNA 1418

Query: 64   SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL--YPKPVTFF 121
                 +  +A G  H + LT       G V++WG  +    G+    D +  Y +P+  F
Sbjct: 1419 HDEKRIQQIAVGDGHGVLLTC-----NGTVYTWGVNNGT--GYNSTKDQIESYSEPM-LF 1470

Query: 122  DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
            +     I+ I+ G NHS  ++ +G LFT G    GQLG GD RS   P  V  ++   ++
Sbjct: 1471 NHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHV-PYIENCIN 1529

Query: 182  QIA--------CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
              A        C   H    +KD  G  ++ FGS   G+LG+ +    +V  P+    + 
Sbjct: 1530 VFAGVDNSGCICSSNHE-DFMKDDYGT-LWVFGSSSCGKLGLGEALTSTVMTPREITTVT 1587

Query: 234  DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
             +  + +      S  L+ EG LY+ G       G   TS+      + + + F     G
Sbjct: 1588 GVYKLALGTM--HSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTEVKFVDVCAG 1645

Query: 288  WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             +H L ++ D E+   G   + + SD + V     + V     S     KVI   A   H
Sbjct: 1646 SSHSLAISVDNELYGWGEGKY-ICSDEKHVLEPTLMEVI---PSPTGEAKVISAVAAGNH 1701

Query: 348  SAVVTG 353
            S V+T 
Sbjct: 1702 SLVLTN 1707


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 24/287 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V + ACG  H L  T       GKV+
Sbjct: 55  KLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTEE-----GKVY 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  S GQLG G+  +    + V+FF   ++ I  +SAG N S  +++ G LF  GD +
Sbjct: 110 AAGGNSEGQLGLGDTEERTTFQLVSFFTA-QHKIKQLSAGSNTSAALTEDGVLFMWGDNS 168

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G  +  +   P +V+  + K +  I+CG  HS  +  +    ++Y FG  + G+LG
Sbjct: 169 EGQIGLAEEANVCVPSEVT--IGKPISWISCGYYHSAFVTTE---GELYTFGEPENGKLG 223

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
           +S +++++  +PQ+ +G+   ++  ++  G  + AL+ E  +YT+G G            
Sbjct: 224 LSPEQLKNHRIPQLVLGIPG-KVNQVACGGGHTVALTEE-EVYTFGLGQFGQLGLGTFIF 281

Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            TS+    + L  +      A G NH  +++  G +   G   HG L
Sbjct: 282 ETSEPKVVKHL-QNQKIQYIACGENHTALISDTGHMYTFGDGRHGKL 327



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 133/315 (42%), Gaps = 52/315 (16%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           ++S G  H+  ++ +  L+  G   +GQLG G   + + P  V +   + V   ACG  H
Sbjct: 39  YLSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNH 98

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +LV  ++    +VY  G    GQLG+     R+ +   V+      +I  +SA  + SAA
Sbjct: 99  TLVYTEE---GKVYAAGGNSEGQLGLGDTEERT-TFQLVSFFTAQHKIKQLSAGSNTSAA 154

Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G L+ WG       G    ++V  P  +      S  + G+ H   +T +GE+   
Sbjct: 155 LTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWISCGYYHSAFVTTEGELYTF 214

Query: 304 GGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGV--KVIQIAAGAEHSAVVTGKFHWVRL 360
           G   +G L   PE++ + R   + L       G+  KV Q+A G  H+  +T        
Sbjct: 215 GEPENGKLGLSPEQLKNHRIPQLVL-------GIPGKVNQVACGGGHTVALT-------- 259

Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN-TCDQIHPKVVNLGDEFQNRDT 419
                                 + T+G G+ GQLGLG    +   PKVV      QN+  
Sbjct: 260 -------------------EEEVYTFGLGQFGQLGLGTFIFETSEPKVVK---HLQNQKI 297

Query: 420 QLEVFCGSGFTYAIS 434
           Q  + CG   T  IS
Sbjct: 298 QY-IACGENHTALIS 311



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLGTG--RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++++G   +G+LG    +L +   PQL+ L     V+ +ACGG H +ALT        +
Sbjct: 210 ELYTFGEPENGKLGLSPEQLKNHRIPQLV-LGIPGKVNQVACGGGHTVALTEE------E 262

Query: 93  VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK V      +  I +I+ G NH+  +SD+G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQK--IQYIACGENHTALISDTGHMYTFG 320

Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G  ++ +   P   S+F+   V  +ACG  H LV 
Sbjct: 321 DGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVF 364



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 66/246 (26%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           KV++ G  ++GQLG G   +  + QL++  ++   +  L+ G     ALT       G +
Sbjct: 107 KVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTE-----DGVL 161

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD- 152
           F WG  S GQ+G  E  +   P  VT        I+ IS G+ HS FV+  G L+T G+ 
Sbjct: 162 FMWGDNSEGQIGLAEEANVCVPSEVTIG----KPISWISCGYYHSAFVTTEGELYTFGEP 217

Query: 153 ---------------------------------------------------GTFGQLGHG 161
                                                              G FGQLG G
Sbjct: 218 ENGKLGLSPEQLKNHRIPQLVLGIPGKVNQVACGGGHTVALTEEEVYTFGLGQFGQLGLG 277

Query: 162 DYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
            +    S P  V    N+ +  IACG  H+  L+ D     +Y FG G+ G+LG+ ++  
Sbjct: 278 TFIFETSEPKVVKHLQNQKIQYIACGENHT-ALISDT--GHMYTFGDGRHGKLGLGQENF 334

Query: 221 RSVSLP 226
            +  +P
Sbjct: 335 TNQFVP 340


>gi|225439268|ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
          Length = 1076

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 41/342 (11%)

Query: 28  EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           E +    +++SWG+G + QLGTG  H +  P  ++    + +  ++    H +A+++   
Sbjct: 148 ERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSA--- 204

Query: 88  VIGGKVFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
              G+V++WG G  G+LGH E          + P+ VT   G R  +  I+A  +H+   
Sbjct: 205 --RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRR-VKAIAAAKHHTVVA 261

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           ++ G +FT G    GQLG+    +   P +VSS  +K V  +A   +H+ V+ +     +
Sbjct: 262 TEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-AVAAANKHTAVISE---SGE 317

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           V+ +G  K+GQLG       S   P+V   L    + G++A    +  L A+G ++TWG 
Sbjct: 318 VFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGH 377

Query: 262 GFNSTSDV----NCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGML 311
              +   V    N  ++  + L F Q       A G  H + LT DG +       + + 
Sbjct: 378 RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIF------YWVS 431

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           SDP+         +  ++V +L G  V  I+AG    A VT 
Sbjct: 432 SDPD---------LRCQQVYSLCGRTVSSISAGKYWIAAVTA 464



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 51/232 (21%)

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
           +D +  +++ +GSG   QLG     I+   LP     LH   I  +SA    S A+SA G
Sbjct: 149 RDSVATELFSWGSGVNYQLGTGNTHIQK--LPCKVDSLHGTFIKSVSAAKFHSVAVSARG 206

Query: 255 HLYTWGRG------------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGE 299
            +YTWG G             +  + V  P+ +   L   +    A   +H +V T  GE
Sbjct: 207 EVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGE 266

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   G +  G L        T+P+     +VS+L   K++ +AA  +H+AV         
Sbjct: 267 VFTWGSNREGQLG--YTSVDTQPIP---RRVSSLKS-KIVAVAAANKHTAV--------- 311

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                            I+E+  + TWG  + GQLG G  N+     P+VV 
Sbjct: 312 -----------------ISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVE 346


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 151/329 (45%), Gaps = 22/329 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V S G  T GQLG      E  P L+       V +++CG  H LA+        G+VF+
Sbjct: 42  VHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHK-----GRVFA 96

Query: 96  WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG GS GQLG  E  + ++ PK +    G +  I  +S G  HS  +S+ G +++ G  +
Sbjct: 97  WGAGSEGQLGIEECKEKIFTPKKIKTLTGIK--IIQVSCGHYHSLALSEDGQVYSWGKNS 154

Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   GQL
Sbjct: 155 QGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGTSFGWGSNNTGQL 211

Query: 214 GVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
            +S +          +IG L  ++++ IS   + +A L+  G ++T+G       G+N T
Sbjct: 212 ALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPT 271

Query: 267 SDVNCPQSLPSSLSF-SQAALGWNHVLV-LTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
           +    PQ +       SQ   G  H L  +   GEV+  G   +   S     +      
Sbjct: 272 AKKRGPQQVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRNCASSPTHSEAQMENFD 331

Query: 325 VA-LEKVSNLDGVKVIQIAAGAEHSAVVT 352
           ++ L   ++L  V+V  I AG   + V T
Sbjct: 332 MSCLISANDLVDVQVKHIFAGTYVNVVTT 360



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 122/295 (41%), Gaps = 51/295 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   + G  HS  +   G + +CGD T GQLG         P  + +     V  ++CG 
Sbjct: 23  VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGK 82

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +   +  P+    L  I+I+ +S     S
Sbjct: 83  EHSLAV---CHKGRVFAWGAGSEGQLGIEECK-EKIFTPKKIKTLTGIKIIQVSCGHYHS 138

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +G +Y+WG+  NS   +   +  PS  S            +Q A G  H   L+ 
Sbjct: 139 LALSEDGQVYSWGK--NSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 196

Query: 297 DGEVLMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G ++ G L+   +   V   +P S+       L  + VI I+ G EH+AV+T 
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGA-----LKSLDVIYISCGYEHTAVLT- 250

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    +N  + T+G    GQLG   T  +  P+ V
Sbjct: 251 -------------------------QNGKVFTFGDNSCGQLGYNPTAKKRGPQQV 280



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 17/238 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WGAG++GQLG     +++ +P+ +   +   +  ++CG  H LAL+       G+V
Sbjct: 93  RVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSE-----DGQV 147

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +SWG+ S GQLG G E      P+ V   +G    +  ++AG  HS  +S SG  F  G 
Sbjct: 148 YSWGKNSQGQLGLGKEFPSQASPQRVRSLEG--IPLAQVAAGGAHSFALSLSGTSFGWGS 205

Query: 153 GTFGQL---GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
              GQL   G+        P  + +  + +V  I+CG  H+ VL ++    +V+ FG   
Sbjct: 206 NNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQN---GKVFTFGDNS 262

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
            GQLG +    +    PQ   G+  +       +    A +   G + ++GRG N  S
Sbjct: 263 CGQLGYNPTAKKRG--PQQVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRNCAS 318


>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
          Length = 427

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 147/346 (42%), Gaps = 45/346 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S  ++   ACG  H LALT       G VF
Sbjct: 75  KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTET-----GSVF 129

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 130 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 187

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 188 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 247

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 248 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGASQIYAGYTCS 301

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 302 FAVSEVGGLFFWGATNTSRESTMYPKTVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 361

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   +    +   S A ++V  LDGV   Q+A G  HS V+
Sbjct: 362 PTFGELGYGDHKPKS---STAAQEVKTLDGVFTEQVAMGYSHSLVI 404



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 155/379 (40%), Gaps = 63/379 (16%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AH L +T+      GK++SWGR   GQLGHG+      P+ +        TI   + G N
Sbjct: 65  AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHE--TIVSAACGRN 117

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           H+  ++++G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++  
Sbjct: 118 HTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIM-- 174

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E  
Sbjct: 175 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 222

Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                     T D    Q LP  ++     A G NH LVL     V   G   +G L   
Sbjct: 223 ---------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 270

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
           E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P 
Sbjct: 271 EQKDEMVP---RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 327

Query: 372 FFIN----------------VIAENRAIMTWGWG-EHGQLGLGNTCDQIHPKVVNLGDEF 414
              +                ++A + + ++WG     G+LG G+      PK      E 
Sbjct: 328 TVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 383

Query: 415 QNRDTQLEVFCGSGFTYAI 433
           +  D         G+++++
Sbjct: 384 KTLDGVFTEQVAMGYSHSL 402



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  +    ++ +   ACG  H+L L + 
Sbjct: 66  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTET 125

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 126 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 180

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+            LG N       DG+ +        +  D E 
Sbjct: 181 YSFG----------CPE---------YGQLGHNS------DGKFI---ARAQRIEYDCEL 212

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ V+  +                 
Sbjct: 213 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 253

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 254 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAS-QIYAGYTCSF 302

Query: 432 AIS 434
           A+S
Sbjct: 303 AVS 305



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 237 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 291

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
           + I AG+  S  VS+ G LF                              CG        
Sbjct: 292 SQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKTVQDLCGWRIRSLACGKSSIIVAA 351

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 352 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVIARD 407


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 122/232 (52%), Gaps = 21/232 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++ + G  +DGQLG G  +D +S Q L      + + +L+ G     ALT       G++
Sbjct: 106 EILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTE-----DGRL 160

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  S+GQLG G    AL P+ +        +I  +S G+ HS  V+DSG ++T G+ 
Sbjct: 161 FLWGDNSAGQLGFGNDSHALLPQELNMG----QSIHWVSCGYRHSALVTDSGDVYTFGES 216

Query: 154 TFGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
             G+LG   ++  +HS P +V S   ++V Q+ACG +H+L L +D    ++Y FG G+ G
Sbjct: 217 ADGRLGLSAHQLANHSYPQRVESL--RSVLQVACGGKHTLALTED----ELYCFGGGEFG 270

Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           QLG+    +  V+   V +G      +  ++     SA ++  G LYT+G G
Sbjct: 271 QLGLG--MLVFVADSPVAVGHFRKDRVTHVTCGEQHSALITDSGLLYTFGDG 320



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 15/165 (9%)

Query: 36  VWSWGAGTDGQLGTG--RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V+++G   DG+LG    +L +   PQ   + SL SV  +ACGG H LALT        ++
Sbjct: 210 VYTFGESADGRLGLSAHQLANHSYPQ--RVESLRSVLQVACGGKHTLALTE------DEL 261

Query: 94  FSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           + +G G  GQLG G +V  A  P  V  F   R  +TH++ G  HS  ++DSG L+T GD
Sbjct: 262 YCFGGGEFGQLGLGMLVFVADSPVAVGHFRKDR--VTHVTCGEQHSALITDSGLLYTFGD 319

Query: 153 GTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           G  G+LGHGD  + +  +P     F   +V  +ACG  H LV  +
Sbjct: 320 GRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFAR 364



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 142/352 (40%), Gaps = 71/352 (20%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
           HIS G +HS FV++ G LF  GD   GQLG       + PV V     +    +ACG  H
Sbjct: 38  HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
           +LV        ++   G    GQLG+    D   S+S  ++        I  +SA    S
Sbjct: 98  TLVSTSQ---GEILAAGGNSDGQLGLGHCND---SISFQRLRPFCDYAPIKLLSAGDHTS 151

Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
           AAL+ +G L+ WG       GF + S    PQ L    S    + G+ H  ++T  G+V 
Sbjct: 152 AALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWVSCGYRHSALVTDSGDVY 211

Query: 302 MLGGSHHGML----------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             G S  G L          S P+RV S R                V+Q+A G +H+  +
Sbjct: 212 TFGESADGRLGLSAHQLANHSYPQRVESLR---------------SVLQVACGGKHTLAL 256

Query: 352 T---------GKFHWV---RLFIISYTPFFPPFFIN--------------VIAENRAIMT 385
           T         G+F  +    L  ++ +P     F                +I ++  + T
Sbjct: 257 TEDELYCFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSALITDSGLLYT 316

Query: 386 WGWGEHGQLGLG--NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           +G G HG+LG G  N  +Q  P V     E+    + + V CGS      +R
Sbjct: 317 FGDGRHGKLGHGDENFTNQFTPTVCQRFFEY----SVMTVACGSSHMLVFAR 364


>gi|397494815|ref|XP_003818266.1| PREDICTED: uncharacterized protein LOC100982654 [Pan paniscus]
          Length = 885

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 172/426 (40%), Gaps = 75/426 (17%)

Query: 40  GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
           GA + GQLG G   D L PQ LN      SV  +  GG H   +T      GG +F  G 
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGL 502

Query: 99  GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
              GQLG G   D  Y  P     G    I  ++ GW+ +  ++++G + +CG  +FGQL
Sbjct: 503 NKDGQLGLGHTEDIPYFTPCKSLFG--CAIQQVACGWDFTIMLTENGQVLSCGSNSFGQL 560

Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS-----GKRG 211
           G  HG  R    P  +  F  + V  IA G+RH+L      +   V+ +G+     G+R 
Sbjct: 561 GVPHGPRRC-VVPQAI-EFHKEKVVCIAAGLRHALAATASGI---VFQWGTGLAPCGRRL 615

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNST 266
             G +     +   P    GL + + + + A  D SA+L+  G +Y WG        N  
Sbjct: 616 CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA 675

Query: 267 SDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-------- 314
           + +  PQ + +    ++       GW H++  T  G++   G + +G L           
Sbjct: 676 AFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWK 735

Query: 315 -ERVSSTRPLSVALEKVSN----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            E+  S  P S     + +    L G    +++ G+EH+  + G                
Sbjct: 736 LEKQDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAIIGG--------------- 778

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 429
                          +WGW EHG  G G   +   PK V    +     + L V CG+G 
Sbjct: 779 ------------VCYSWGWNEHGMCGDGTEANVWAPKPV----QALLSSSGLLVGCGAGH 822

Query: 430 TYAISR 435
           + A+ +
Sbjct: 823 SLALCQ 828



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 23/177 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           +V+ WG+   GQL        + PQ +      +  V+ +  G  H++A T       GK
Sbjct: 659 EVYVWGSNKHGQLANEAAFLPV-PQKIEAHCFQNEKVTAIWSGWTHLVAQTE-----TGK 712

Query: 93  VFSWGRGSSGQLGHG---------EMVDALYP--KPVTFFDGHRYTIT---HISAGWNHS 138
           +F+WGR   GQLG           E  D+  P  +P        + +T    +S G  H+
Sbjct: 713 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHN 772

Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
             +    C ++ G    G  G G   +  +P  V + ++ +   + CG  HSL L +
Sbjct: 773 LAIIGGVC-YSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 828


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 172/429 (40%), Gaps = 83/429 (19%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V +WG+G DGQLG G   +E   + +      +VS +  G  + LA+ +      G++F+
Sbjct: 13  VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICAD-----GRLFT 67

Query: 96  WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           WG    G LGH  E      P PV    G   +I   + G  H   V D G  +  G   
Sbjct: 68  WGWNQRGTLGHPPETKTESSPAPVDALAG--VSIVQAAIGGWHCLAVDDKGRAYAWGGNE 125

Query: 155 FGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +GQ G    R            P+         V Q+A G  HS+VL +D     V+ +G
Sbjct: 126 YGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQD---GHVWTWG 182

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
                Q     D I+ +S P    GL +++++ + A    + AL+ +G L+ WG    G 
Sbjct: 183 -----QPWPPGD-IKQISTPVRVQGLENVKVIAVGAF--HNLALTEDGILWAWGNNEYGQ 234

Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             T D   P+S P      S LS    A G  H   LT +GEV   G   HG L   +  
Sbjct: 235 LGTGDTQ-PRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDK 293

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
           SS     +  +KV  L G  +IQ++ G  HS  +T                         
Sbjct: 294 SS----HMVPQKVELLAGEDIIQVSCGGTHSVALT------------------------- 324

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL------------GDEFQNRDTQLEVFC 425
             +  + ++G G+HG+LG G      HP  V +            G ++Q R     V C
Sbjct: 325 -RDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQAR----YVAC 379

Query: 426 GSGFTYAIS 434
           G   T AI+
Sbjct: 380 GGRHTLAIA 388



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 54/363 (14%)

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           P+  +   V +WG G  GQLG G   +  + + V   D     ++ + AG  +S  +   
Sbjct: 5   PAFSLPTAVLAWGSGEDGQLGMGGYEEEDWARGVAALDA--LAVSAVVAGSRNSLAICAD 62

Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           G LFT G    G LGH  + ++ SSP  V +    ++ Q A G  H L +       + Y
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK---GRAY 119

Query: 204 GFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
            +G  + GQ G   +R         R + +PQ       +++  ++A G  S  L+ +GH
Sbjct: 120 AWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCA--PKLKVRQVAAGGTHSVVLTQDGH 177

Query: 256 LYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           ++TWG+ +       ++ P  +    +    A+G  H L LT DG +   G + +G L  
Sbjct: 178 VWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGT 237

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
            +    ++P+     +V  L  + ++ IAAG  HS  +T                     
Sbjct: 238 GDTQPRSQPI-----RVEGLSDLSLVDIAAGGWHSTALT--------------------- 271

Query: 374 INVIAENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 432
                +   +  WG GEHG+LG G +    + P+ V L       D  ++V CG   + A
Sbjct: 272 -----KEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVEL---LAGEDI-IQVSCGGTHSVA 322

Query: 433 ISR 435
           ++R
Sbjct: 323 LTR 325



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 32/310 (10%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG    G LG       E SP  ++  +  S+   A GG H LA+        G+ 
Sbjct: 64  RLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK-----GRA 118

Query: 94  FSWGRGSSGQLGHG-----EMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           ++WG    GQ G       +   AL    P+      +  +  ++AG  HS  ++  G +
Sbjct: 119 YAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHV 178

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           +T G         GD +  S+PV+V     +NV  IA G  H+L L +D +   ++ +G+
Sbjct: 179 WTWGQ----PWPPGDIKQISTPVRVQGL--ENVKVIAVGAFHNLALTEDGI---LWAWGN 229

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + GQLG    + RS   P    GL D+ +V I+A G  S AL+ EG +Y WGRG     
Sbjct: 230 NEYGQLGTGDTQPRS--QPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRL 287

Query: 264 ---NSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              +  S    PQ   L +     Q + G  H + LT DG +   G   HG L    +V+
Sbjct: 288 GFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVT 347

Query: 319 STRPLSVALE 328
           +  P+ V ++
Sbjct: 348 TGHPMEVPID 357


>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 143/329 (43%), Gaps = 48/329 (14%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRY 126
           +V+ + CGG H   LT+      G+V++WGRG  G+LGHG+      P+ V     G   
Sbjct: 1   AVAAVCCGGQHAAVLTA-----AGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVG--V 53

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS------SPVKVSSFVNKNV 180
               ++ G+ ++  VS  G L+T G G  G+LG GDY  H       +P  + +F  + V
Sbjct: 54  VCAQVACGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAV 113

Query: 181 HQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS--------VSLPQVTI 230
            +I+ G    H++ L+       VY +G  + GQLG + + +          V  P+   
Sbjct: 114 REISVGPGGYHTVALVSPA---DVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVD 170

Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP-------------- 276
            +  + +  + A    +A L+AEG  Y  GR F     +  P+S P              
Sbjct: 171 SVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRL 230

Query: 277 ----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
                +   +Q A G  H + LT DGEV   G  + G L      +   P  V+  K S 
Sbjct: 231 LDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASR 290

Query: 333 LDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
            D   V+++A G   + V+ G F+   LF
Sbjct: 291 RD---VLEVACGNNGTLVLCGYFNPPSLF 316



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 135/337 (40%), Gaps = 61/337 (18%)

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIAC 185
            +  +  G  H+  ++ +G ++T G G FG+LGHGD  S  +P  V  + V     Q+AC
Sbjct: 1   AVAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVAC 60

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL------PQVTIGLHDIEIVG 239
           G  ++  +        +Y +G+G+ G+LG+        +       P    G   +  + 
Sbjct: 61  GFAYTAAVSAQ---GALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREIS 117

Query: 240 ISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCPQS------LP--------SSLSF 281
           +   G  + AL +   +YTWG         T++   P++      +P        S L  
Sbjct: 118 VGPGGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRV 177

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTR---PLSVALEKVSNLDGV 336
            +   GW H  +LT +G   + G +  G   L DPE         P       +  L   
Sbjct: 178 RRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAK 237

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
           +V QIA G EHS  +T                          E+  + + G G  GQLG 
Sbjct: 238 RVAQIACGGEHSVALT--------------------------EDGEVHSCGAGNKGQLGH 271

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
           GN  ++  P+VV+   +   RD  LEV CG+  T  +
Sbjct: 272 GNVDNEQFPRVVSR-LKASRRDV-LEVACGNNGTLVL 306



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 76/188 (40%), Gaps = 41/188 (21%)

Query: 34  VKVWSWGAGTDGQLGTGR----------LHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
             V++WG    GQLG              H    P+ ++  S   V  +  G  H   LT
Sbjct: 132 ADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALLT 191

Query: 84  SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF---FDGHRYT------------- 127
           +      G  +  GR   GQLG G+        P +F     GH Y              
Sbjct: 192 AE-----GAAYVCGRNFQGQLGLGD--------PESFPHNERGHPYQPDFRLLDRLGAKR 238

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF--VNKNVHQIAC 185
           +  I+ G  HS  +++ G + +CG G  GQLGHG+  +   P  VS      ++V ++AC
Sbjct: 239 VAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVAC 298

Query: 186 GMRHSLVL 193
           G   +LVL
Sbjct: 299 GNNGTLVL 306


>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 563

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 181/426 (42%), Gaps = 67/426 (15%)

Query: 1   MVAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL 60
           MVA ++  T  G + ++  + P          +    +WG    GQLG G   +  +P  
Sbjct: 31  MVAVVLGITSVGAARVLAQSVPSAAAGTPGTGL----AWGFNALGQLGDGTTTNRNTPVT 86

Query: 61  LNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
           ++L + ++++ +A G   H LA+TS S+++     +WG  + GQLG G   +   P  V 
Sbjct: 87  VDLPADTTITAIAAGVNGHSLAVTSASTML-----AWGFNTWGQLGDGTTTNRNTPVAVD 141

Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
              G   TIT I+AG +HS  V+ +G +   G  + GQLG G   + ++PV V       
Sbjct: 142 LPTG--TTITAIAAGKSHSLAVTSAGTMLAWGLNSAGQLGDGTTTNRNTPVAVDLPTGTT 199

Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDI 235
           +  IA G  HSL L        +  +G    GQLG     +++   +V LP  T      
Sbjct: 200 ITAIAAGNGHSLALTS---AGTMLAWGENTWGQLGDGTTTNRNTPVTVDLPTGT------ 250

Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQS--LPSSLSFSQAALG 287
            I  ++  G  S A+++ G +  WG  F       +T++ N P +  LP+  + +  A G
Sbjct: 251 TITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGG 310

Query: 288 WN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG-- 344
              H L  T  G +L  G +  G L D    + + P++V L       G  +  IAAG  
Sbjct: 311 GGGHSLAATSTGTMLAWGLNSFGQLGDGTTSNRSTPVTVDLPA-----GTTITAIAAGGG 365

Query: 345 AEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIH 404
           + HS   T                              ++ WG    GQLG G T ++  
Sbjct: 366 SGHSLAAT--------------------------STGTMLAWGANTLGQLGDGTTSNRST 399

Query: 405 PKVVNL 410
           P  V+L
Sbjct: 400 PVTVDL 405



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 77/208 (37%), Gaps = 48/208 (23%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG------- 90
           +WG  T GQLG G   +  +P  ++L + ++++ LA GG H LA+TS  +++        
Sbjct: 221 AWGENTWGQLGDGTTTNRNTPVTVDLPTGTTITALAGGGGHSLAVTSTGTMLAWGFNFWG 280

Query: 91  -----------------------------------------GKVFSWGRGSSGQLGHGEM 109
                                                    G + +WG  S GQLG G  
Sbjct: 281 QLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGGHSLAATSTGTMLAWGLNSFGQLGDGTT 340

Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
            +   P  V    G   T      G  HS   + +G +   G  T GQLG G   + S+P
Sbjct: 341 SNRSTPVTVDLPAGTTITAIAAGGGSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTP 400

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDC 197
           V V       +  +  G  HSL ++   
Sbjct: 401 VTVDLPAGTTITAVTAGGFHSLAIVPST 428


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 92/193 (47%), Gaps = 10/193 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +++ WG  T GQLG  +      SPQ L       V+ ++ GG H   L+     + G V
Sbjct: 135 QLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLS-----LSGVV 189

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           F WG  S+GQLG G+  D   P  V    G +     IS G  H+  +S  G +FT G G
Sbjct: 190 FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK--TVSISCGGEHTATLSKGGTVFTFGSG 247

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            FGQLGH   +    P  ++      V Q+ CG  H+LV  +      +Y FG G +GQL
Sbjct: 248 GFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEES--SKLIYSFGCGMQGQL 305

Query: 214 GVSKDRIRSVSLP 226
           G  +   +SV LP
Sbjct: 306 GNGEQVKQSVPLP 318



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 41/298 (13%)

Query: 44  DGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
           +G++   RLH+E + + L    L +  +  + CG A  + L        GKV        
Sbjct: 51  EGKVSVLRLHNEDADEKLEPLQLQNERIRSIVCGEAGAVLLAD-----DGKVLI------ 99

Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-H 160
                  M  +   +P+   +  +  +  I+ G  HS  +S+ G LF  G+ T GQLG  
Sbjct: 100 -------MDQSTVCRPLKSLENRQ--VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLR 150

Query: 161 GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKD 218
            +     SP  + S     V QI+ G  HS VL    L   V+G+GS   GQLG+  +KD
Sbjct: 151 KEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVL---SLSGVVFGWGSNSAGQLGLGDTKD 207

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP 272
           R     +P +   L   + V IS  G+ +A LS  G ++T+G       G NS  D + P
Sbjct: 208 RF----VPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHP 263

Query: 273 QSLPS--SLSFSQAALGWNHVLVLTGDGEVLM-LGGSHHGMLSDPERVSSTRPLSVAL 327
           + +        SQ   G +H LV     +++   G    G L + E+V  + PL V L
Sbjct: 264 RLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLL 321



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 5/104 (4%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+++G+G  GQLG   L DE  P+L+     S VS + CG  H L     S +I    +S
Sbjct: 241 VFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLI----YS 296

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHS 138
           +G G  GQLG+GE V    P PV    +   +T+  +  G +HS
Sbjct: 297 FGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLITGEHHS 340



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 113/290 (38%), Gaps = 68/290 (23%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +  ISAG +  GF+ +       G  +  +L + D      P+++    N+ +  I CG 
Sbjct: 36  VQDISAGKSCIGFIRE-------GKVSVLRLHNEDADEKLEPLQLQ---NERIRSIVCGE 85

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
             +++L  D           GK   +  S     +V  P  +  L + +++ I+     S
Sbjct: 86  AGAVLLADD-----------GKVLIMDQS-----TVCRPLKS--LENRQVIQIACGDQHS 127

Query: 248 AALSAEGHLYTWGRGFN-------STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG 298
            ALS +G L+ WG   +         +    PQ L S   +  +Q + G NH  VL+  G
Sbjct: 128 MALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSG 187

Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
            V   G +  G L   +      P  V      +L G K + I+ G EH+A         
Sbjct: 188 VVFGWGSNSAGQLGLGDTKDRFVPTIV-----KSLCGKKTVSISCGGEHTAT-------- 234

Query: 359 RLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                             +++   + T+G G  GQLG  +  D+ HP+++
Sbjct: 235 ------------------LSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLI 266



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 32/128 (25%)

Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQI 341
           Q A G  H + L+ DG++ + G + HG L    E+  +  P     + + +L  + V QI
Sbjct: 119 QIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSP-----QHLQSLCEIPVAQI 173

Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
           +AG  HS            F++S +                +  WG    GQLGLG+T D
Sbjct: 174 SAGGNHS------------FVLSLSG--------------VVFGWGSNSAGQLGLGDTKD 207

Query: 402 QIHPKVVN 409
           +  P +V 
Sbjct: 208 RFVPTIVK 215


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 155/354 (43%), Gaps = 68/354 (19%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRY 126
           +V  +A G  H L L +      GKV+S G   +G+LG G + +  Y   PV   +  R 
Sbjct: 48  TVKAVASGEKHTLFLAN-----DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR- 101

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIAC 185
            I  ISAG +HS  VSD G LF  G  + GQL   GD     +P +V S       Q+AC
Sbjct: 102 -IIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSL--PETVQVAC 158

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANG 244
           G  H++ L     G +V+ +G    G++  S   +   VS+P          I+ ISA  
Sbjct: 159 GASHTVSLNG---GGRVFIWGQQSDGRIRHSPAEVELFVSVP----------IIQISAGN 205

Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
             + AL+A G L+ WGR      G  +  DV  P+ +P+  S      G +H + LT +G
Sbjct: 206 LFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEG 265

Query: 299 EVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV-TGKF 355
            V   G    G L    P R  +       +  ++ + G  V +IA G  H+ VV  GK 
Sbjct: 266 RVFSCGSDSFGQLGCGQPSRSQN------CMRGITEMLGSHVTRIACGRCHTIVVANGKM 319

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           H                            T+G   +GQLG GNT +QI P++++
Sbjct: 320 H----------------------------TFGLNSNGQLGHGNTRNQITPRMID 345



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 13/159 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +++WG   +GQLG     D ++P+   + +++SV ++ CG +H +ALT       G+VFS
Sbjct: 217 LFAWGRNEEGQLGNFTNRDVINPR--EVPNINSVVVVECGDSHSIALTHE-----GRVFS 269

Query: 96  WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            G  S GQLG G+   +    + +T   G    +T I+ G  H+  V++ G + T G  +
Sbjct: 270 CGSDSFGQLGCGQPSRSQNCMRGITEMLGSH--VTRIACGRCHTIVVAN-GKMHTFGLNS 326

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
            GQLGHG+ R+  +P  + S   +NV  +  G   S  L
Sbjct: 327 NGQLGHGNTRNQITPRMIDSV--ENVASVFAGWDQSFCL 363


>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 41/342 (11%)

Query: 28  EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           E +    +++SWG+G + QLGTG  H +  P  ++    + +  ++    H +A+++   
Sbjct: 148 ERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSA--- 204

Query: 88  VIGGKVFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
              G+V++WG G  G+LGH E          + P+ VT   G R  +  I+A  +H+   
Sbjct: 205 --RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRR-VKAIAAAKHHTVVA 261

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
           ++ G +FT G    GQLG+    +   P +VSS  +K V  +A   +H+ V+ +     +
Sbjct: 262 TEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-AVAAANKHTAVISE---SGE 317

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           V+ +G  K+GQLG       S   P+V   L    + G++A    +  L A+G ++TWG 
Sbjct: 318 VFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGH 377

Query: 262 GFNSTSDV----NCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGML 311
              +   V    N  ++  + L F Q       A G  H + LT DG +       + + 
Sbjct: 378 RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIF------YWVS 431

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
           SDP+         +  ++V +L G  V  I+AG    A VT 
Sbjct: 432 SDPD---------LRCQQVYSLCGRTVSSISAGKYWIAAVTA 464



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 51/232 (21%)

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
           +D +  +++ +GSG   QLG     I+   LP     LH   I  +SA    S A+SA G
Sbjct: 149 RDSVATELFSWGSGVNYQLGTGNTHIQK--LPCKVDSLHGTFIKSVSAAKFHSVAVSARG 206

Query: 255 HLYTWGRG------------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGE 299
            +YTWG G             +  + V  P+ +   L   +    A   +H +V T  GE
Sbjct: 207 EVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGE 266

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   G +  G L        T+P+     +VS+L   K++ +AA  +H+AV         
Sbjct: 267 VFTWGSNREGQLG--YTSVDTQPIP---RRVSSLKS-KIVAVAAANKHTAV--------- 311

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                            I+E+  + TWG  + GQLG G  N+     P+VV 
Sbjct: 312 -----------------ISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVE 346


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 17/231 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           ++++WG     QLG G  +  L P  +  NLS+   V  +ACG  H L LTS      G+
Sbjct: 189 EIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 242

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V D+G ++  G 
Sbjct: 243 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSVAVVDNGEVYVWGY 301

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   + S+P ++++     V ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 302 NGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDE---GQVYVWGANSYGQ 358

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
           LG      +S   P   + +    I+ I+A  +   SAA +  GH+Y WG+
Sbjct: 359 LGTGNKSNQSYPTP---VAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 406



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           S +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 131 STVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSG-PHVILATTEGE 189

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 190 IFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 246

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 247 GYNNSGQVGSGSTANQPIPR-RVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNG 305

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G  S+ + + P  + +   +   + A G+ H LVLT +G+V + G + +G L    + 
Sbjct: 306 QLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKS 365

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  VA+EK       ++I+IAA
Sbjct: 366 NQSYPTPVAVEK------DRIIEIAA 385


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 155/349 (44%), Gaps = 42/349 (12%)

Query: 29  EEQQVV-----KVWSWGAGTDGQLGTGRLHD-------ELSPQLLNLSSLSS--VSMLAC 74
            EQ+V       +WSWG+   G+ G+G   D       +  P+ +    L +  +  +AC
Sbjct: 52  REQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVAC 111

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           GGAH + +T       G++ + G   +GQLG G + +A   + V   +    +I  ++AG
Sbjct: 112 GGAHSMIVTE-----SGRLLTCGLNDNGQLGLGNLENASEFEEVKGTE----SIADVAAG 162

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
           + H+   S  G L+  G    GQLGH D   +    P ++    +  + Q+ACG  HS+ 
Sbjct: 163 FWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMA 222

Query: 193 LLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           L KD    +VY +G G  G+L  G ++D      +P+    L    I  I A  + S+A+
Sbjct: 223 LTKD---GEVYTWGFGAHGRLGHGSTEDEF----MPKRVEALVGENISSIHAGFEYSSAV 275

Query: 251 SAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
           S  G ++ WG G           D   P  L    S  Q A G  H   ++  G +   G
Sbjct: 276 STSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWG 335

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            + HG L    +  +       L+  + L   K  Q+A G++H+ VVTG
Sbjct: 336 HATHGPLGHGLKSPNIILEPTVLDAPAQLQNSK--QVACGSQHTLVVTG 382



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 148/359 (41%), Gaps = 58/359 (16%)

Query: 93  VFSWGRGSSGQLGHGEMVDALY-------PKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           ++SWG    G+ G G   DA         P+ V         I  ++ G  HS  V++SG
Sbjct: 64  LWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESG 123

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            L TCG    GQLG G+  + S   +V     +++  +A G  H+L   K     ++Y +
Sbjct: 124 RLLTCGLNDNGQLGLGNLENASEFEEVKG--TESIADVAAGFWHTLAASKK---GKLYAW 178

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN- 264
           GS K GQLG     ++    PQ  + L D  I  ++     S AL+ +G +YTWG G + 
Sbjct: 179 GSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHG 238

Query: 265 -----STSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                ST D   P+ + + +  + S    G+ +   ++  G+V + G  H  +L   ++ 
Sbjct: 239 RLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKK 298

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
               P+ +            + Q+A G+ H+A V+                         
Sbjct: 299 DQLAPVVLDFP-------TSIRQLAFGSFHAAAVS------------------------- 326

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQI--HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
             +  + TWG   HG LG G     I   P V++   + QN     +V CGS  T  ++
Sbjct: 327 -HSGMLFTWGHATHGPLGHGLKSPNIILEPTVLDAPAQLQNSK---QVACGSQHTLVVT 381



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 125/280 (44%), Gaps = 29/280 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           ++ + G   +GQLG G L  E + +   +    S++ +A G  H LA +       GK++
Sbjct: 124 RLLTCGLNDNGQLGLGNL--ENASEFEEVKGTESIADVAAGFWHTLAASKK-----GKLY 176

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLGH +    L  +P          I  ++ G  HS  ++  G ++T G G 
Sbjct: 177 AWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGA 236

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            G+LGHG       P +V + V +N+  I  G  +S  +       +V+ +G G    LG
Sbjct: 237 HGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAV---STSGKVFVWGYGHFYVLG 293

Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFN 264
               KD++  V L   T       I  ++     +AA+S  G L+TW        G G  
Sbjct: 294 QGDKKDQLAPVVLDFPT------SIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLK 347

Query: 265 STSDVNCPQSL--PSSLSFS-QAALGWNHVLVLTGDGEVL 301
           S + +  P  L  P+ L  S Q A G  H LV+TG G+V 
Sbjct: 348 SPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVF 387



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           KV+ WG G    LG G   D+L+P +L+  +  S+  LA G  H  A++       G +F
Sbjct: 280 KVFVWGYGHFYVLGQGDKKDQLAPVVLDFPT--SIRQLAFGSFHAAAVSH-----SGMLF 332

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +WG  + G LGHG     +  +P T  D          ++ G  H+  V+ +G +F+ G 
Sbjct: 333 TWGHATHGPLGHGLKSPNIILEP-TVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGL 391

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
           G  GQLG G    H  P ++  FV K++ Q+ACG+ H +
Sbjct: 392 GGQGQLGLGSDLDHYEPKQIPRFVGKSLRQVACGLFHCI 430


>gi|118363796|ref|XP_001015122.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89296889|gb|EAR94877.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1387

 Score =  100 bits (249), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 157/336 (46%), Gaps = 53/336 (15%)

Query: 37  WSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +S G+   GQLG  T +++   +P L+       ++ +  G  H +ALT+ +     ++F
Sbjct: 153 YSIGSNIYGQLGADTNQINYSYTPTLIQKLQDYIITKVVSGAYHNIALTNEN-----QLF 207

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWGR + GQLG   +VD                I ++ +GWNHS F++    L++ G G 
Sbjct: 208 SWGRNNEGQLG---LVDK--------------KIVNVFSGWNHSFFITKQNELYSFGSGL 250

Query: 155 FGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQLG G   +  +P KV     ++ + +IACG  HSL+L +     QV+  G  +RGQL
Sbjct: 251 YGQLGQGKCENSITPDKVLYHEKDQKIIKIACGETHSLLLSEQ---GQVFACGENQRGQL 307

Query: 214 GVSKDRIRSVSLPQV--TIGLHDIEIVGISANGDRSAALSAEGH-LYTWGRGFNSTSD-V 269
           G+ +++ + V  PQ      L   E +   A G  S A++ +   LY WG+  ++ S+ +
Sbjct: 308 GLGRNK-KVVLQPQYLSNENLFASESIIDIACGRFSVAITQKTQSLYAWGQFCDTDSNPI 366

Query: 270 NCPQSL------------PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPE 315
             PQ +            P      +A +G +  ++L  +G++   G +  G     D E
Sbjct: 367 YTPQLVFSFNSQKEGKEQPEKNLVKKAVVGGDSCIILMKNGDLYSWGKNQFGECGQGDFE 426

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             S T         ++ L G KV+    G  H+ V+
Sbjct: 427 NKSET------FYPINFLKGKKVLTFHLGEAHTIVL 456



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 58/298 (19%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV--HQIACGMRHSLVLLKDCLGNQVYG 204
           +F  G   +GQ+G  + ++      +  F + N+    ++CG  HS++L +D      Y 
Sbjct: 99  IFVFGSNKYGQIGLSE-KNAGKNFCIPRFCHFNIVFTSVSCGSHHSILLTQD---GYAYS 154

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
            GS   GQLG   ++I     P +   L D  I  + +    + AL+ E  L++WGR   
Sbjct: 155 IGSNIYGQLGADTNQINYSYTPTLIQKLQDYIITKVVSGAYHNIALTNENQLFSWGRNNE 214

Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
              G      VN          FS    GWNH   +T   E+   G   +G L   +  +
Sbjct: 215 GQLGLVDKKIVNV---------FS----GWNHSFFITKQNELYSFGSGLYGQLGQGKCEN 261

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
           S  P  V   +       K+I+IA G  HS +                          ++
Sbjct: 262 SITPDKVLYHEKDQ----KIIKIACGETHSLL--------------------------LS 291

Query: 379 ENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
           E   +   G  + GQLGLG N    + P+ ++  + F + ++ +++ CG  F+ AI++
Sbjct: 292 EQGQVFACGENQRGQLGLGRNKKVVLQPQYLSNENLFAS-ESIIDIACGR-FSVAITQ 347



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 70/291 (24%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++SWG   +GQLG       +  +++N+ S         G  H   +T  +     +++
Sbjct: 205 QLFSWGRNNEGQLGL------VDKKIVNVFS---------GWNHSFFITKQN-----ELY 244

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           S+G G  GQLG G+  +++ P  V + +  +  I  I+ G  HS  +S+ G +F CG+  
Sbjct: 245 SFGSGLYGQLGQGKCENSITPDKVLYHEKDQ-KIIKIACGETHSLLLSEQGQVFACGENQ 303

Query: 155 FGQLGHG-DYRSHSSPVKVSS---FVNKNVHQIACGMRHSLVLLK------------DCL 198
            GQLG G + +    P  +S+   F ++++  IACG R S+ + +            D  
Sbjct: 304 RGQLGLGRNKKVVLQPQYLSNENLFASESIIDIACG-RFSVAITQKTQSLYAWGQFCDTD 362

Query: 199 GNQVY------GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
            N +Y       F S K G+    K+ ++               +VG    GD    L  
Sbjct: 363 SNPIYTPQLVFSFNSQKEGKEQPEKNLVKKA-------------VVG----GDSCIILMK 405

Query: 253 EGHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
            G LY+WG+          F + S+   P +           LG  H +VL
Sbjct: 406 NGDLYSWGKNQFGECGQGDFENKSETFYPINFLKGKKVLTFHLGEAHTIVL 456



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 73/353 (20%), Positives = 136/353 (38%), Gaps = 72/353 (20%)

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           ++F +G    GQ+G  E  +A     +  F       T +S G +HS  ++  G  ++ G
Sbjct: 98  EIFVFGSNKYGQIGLSEK-NAGKNFCIPRFCHFNIVFTSVSCGSHHSILLTQDGYAYSIG 156

Query: 152 DGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
              +GQLG    + + S  P  +    +  + ++  G  H++ L  +   NQ++ +G   
Sbjct: 157 SNIYGQLGADTNQINYSYTPTLIQKLQDYIITKVVSGAYHNIALTNE---NQLFSWGRNN 213

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSD 268
            GQL                 GL D +IV + +  + S  ++ +  LY++G G +     
Sbjct: 214 EGQL-----------------GLVDKKIVNVFSGWNHSFFITKQNELYSFGSGLYGQLGQ 256

Query: 269 VNCPQSL-PSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
             C  S+ P  + + +        A G  H L+L+  G+V   G +  G L     +   
Sbjct: 257 GKCENSITPDKVLYHEKDQKIIKIACGETHSLLLSEQGQVFACGENQRGQLG----LGRN 312

Query: 321 RPLSVALEKVSN---LDGVKVIQIAAGAEHSAVVTGK----FHWVRLFIISYTPFFPP-- 371
           + + +  + +SN        +I IA G   S  +T K    + W +       P + P  
Sbjct: 313 KKVVLQPQYLSNENLFASESIIDIACG-RFSVAITQKTQSLYAWGQFCDTDSNPIYTPQL 371

Query: 372 -FFIN-------------------------VIAENRAIMTWGWGEHGQLGLGN 398
            F  N                         ++ +N  + +WG  + G+ G G+
Sbjct: 372 VFSFNSQKEGKEQPEKNLVKKAVVGGDSCIILMKNGDLYSWGKNQFGECGQGD 424


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 155/354 (43%), Gaps = 68/354 (19%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRY 126
           +V  +A G  H L L +      GKV+S G   +G+LG G + +  Y   PV   +  R 
Sbjct: 48  TVKAVASGEKHTLFLAN-----DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR- 101

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIAC 185
            I  ISAG +HS  VSD G LF  G  + GQL   GD     +P +V S       Q+AC
Sbjct: 102 -IIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSL--PETVQVAC 158

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANG 244
           G  H++ L     G +V+ +G    G++  S   +   VS+P          I+ ISA  
Sbjct: 159 GASHTVSLNG---GGRVFIWGQQSDGRIRHSPAEVELFVSVP----------IIQISAGN 205

Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
             + AL+A G L+ WGR      G  +  DV  P+ +P+  S      G +H + LT +G
Sbjct: 206 LFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEG 265

Query: 299 EVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV-TGKF 355
            V   G    G L    P R  +       +  ++ + G  V +IA G  H+ VV  GK 
Sbjct: 266 RVFSCGSDSFGQLGCGQPSRSQN------CMRGITEMLGSHVTRIACGRCHTIVVANGKM 319

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           H                            T+G   +GQLG GNT +QI P++++
Sbjct: 320 H----------------------------TFGLNSNGQLGHGNTRNQITPRMID 345



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 13/159 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           +++WG   +GQLG     D ++P+   + +++SV ++ CG +H +ALT       G+VFS
Sbjct: 217 LFAWGRNEEGQLGNFTNRDVINPR--EVPNINSVVVVECGDSHSIALTHE-----GRVFS 269

Query: 96  WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            G  S GQLG G+   +    + +T   G    +T I+ G  H+  V++ G + T G  +
Sbjct: 270 CGSDSFGQLGCGQPSRSQNCMRGITEMLGSH--VTRIACGRCHTIVVAN-GKMHTFGLNS 326

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
            GQLGHG+ R+  +P  + S   +NV  +  G   S  L
Sbjct: 327 NGQLGHGNTRNQITPRMIDSV--ENVASVFAGWDQSFCL 363


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 29/270 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           ++++GA  DGQLG   +     P  +          LA G  H +ALT       G+++ 
Sbjct: 109 LYTFGANGDGQLGVEDIPSSNCPVKVECEP-RQYKALAAGADHSVALTD-----DGELYV 162

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG GS GQLG G++ D   P   T        I+ ++ G+ H+ FV+D G +FT G+G  
Sbjct: 163 WGGGSEGQLGLGDIDDKSTP---TLLSTDNKVIS-VACGYYHTAFVTDVGEVFTFGEGDG 218

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           G+LG G DY    +P KV+  + +    +ACG  H++VL  +C   +VY FG G  GQLG
Sbjct: 219 GKLGQGTDYGKAVAPKKVN--IPEKAKSVACGGSHTVVLT-EC--GKVYTFGEGGNGQLG 273

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNC- 271
             K++      P      H  ++  I+A  + +A ++ +G LYT+G G ++    D  C 
Sbjct: 274 -HKNKYFYCETPVWLNFKH--KVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECY 330

Query: 272 -PQSLP------SSLSFSQAALGWNHVLVL 294
             Q  P      S    +Q + G  H++VL
Sbjct: 331 SNQYFPQRSKRFSKFIVTQVSCGGCHMIVL 360



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 126/302 (41%), Gaps = 45/302 (14%)

Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
           ++ G  H+  V++SG LFT G   +GQLG  + +  + P  V     + V  +ACG  H+
Sbjct: 41  VACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHT 100

Query: 191 LVLLKD-CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +V  +  CL    Y FG+   GQLGV  + I S + P V +     +   ++A  D S A
Sbjct: 101 IVATESGCL----YTFGANGDGQLGV--EDIPSSNCP-VKVECEPRQYKALAAGADHSVA 153

Query: 250 LSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
           L+ +G LY WG       G     D + P  L +       A G+ H   +T  GEV   
Sbjct: 154 LTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNKVISVACGYYHTAFVTDVGEVFTF 213

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT----------- 352
           G    G L       +    +VA +KV+  +  K   +A G  H+ V+T           
Sbjct: 214 GEGDGGKLGQ----GTDYGKAVAPKKVNIPEKAK--SVACGGSHTVVLTECGKVYTFGEG 267

Query: 353 --GKFHWVRLFIISYTPFFPPFFINV------------IAENRAIMTWGWGEHGQLGLGN 398
             G+      +    TP +  F   V            + E   + T+G G H +LGL +
Sbjct: 268 GNGQLGHKNKYFYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDH 327

Query: 399 TC 400
            C
Sbjct: 328 EC 329



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 27/286 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++++G    GQLG   +     P  +       V ++ACG  H +  T       G ++
Sbjct: 56  RLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATE-----SGCLY 110

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG  ++  +  P  V   +  +Y    ++AG +HS  ++D G L+  G G+
Sbjct: 111 TFGANGDGQLGVEDIPSSNCPVKVE-CEPRQYKA--LAAGADHSVALTDDGELYVWGGGS 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG GD    S+P  +S+  +  V  +ACG  H+   + D    +V+ FG G  G+LG
Sbjct: 168 EGQLGLGDIDDKSTPTLLST--DNKVISVACGYYHT-AFVTDV--GEVFTFGEGDGGKLG 222

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----STSDV 269
              D  ++V+  +V I     +   ++  G  +  L+  G +YT+G G N          
Sbjct: 223 QGTDYGKAVAPKKVNI---PEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYF 279

Query: 270 NCPQSLPSSLSF----SQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            C    P  L+F    +Q A G NH  ++T  G++   G   H  L
Sbjct: 280 YC--ETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKL 323



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 18/212 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +++ WG G++GQLG G + D+ +P L  LS+ + V  +ACG  H   +T       G+VF
Sbjct: 159 ELYVWGGGSEGQLGLGDIDDKSTPTL--LSTDNKVISVACGYYHTAFVTD-----VGEVF 211

Query: 95  SWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++G G  G+LG G +   A+ PK V   +  +     ++ G +H+  +++ G ++T G+G
Sbjct: 212 TFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAK----SVACGGSHTVVLTECGKVYTFGEG 267

Query: 154 TFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQLGH + Y    +PV + +F +K V QIA G  H+ ++ +     Q+Y FG G+  +
Sbjct: 268 GNGQLGHKNKYFYCETPVWL-NFKHK-VTQIAAGENHTALVTEK---GQLYTFGDGRHAK 322

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
           LG+  +   +   PQ +       +  +S  G
Sbjct: 323 LGLDHECYSNQYFPQRSKRFSKFIVTQVSCGG 354



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 13/171 (7%)

Query: 33  VVKVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           V +V+++G G  G+LG G  + + ++P+ +N+        +ACGG+H + LT       G
Sbjct: 207 VGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPE--KAKSVACGGSHTVVLTE-----CG 259

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           KV+++G G +GQLGH       Y +   + +  ++ +T I+AG NH+  V++ G L+T G
Sbjct: 260 KVYTFGEGGNGQLGHKNKY--FYCETPVWLN-FKHKVTQIAAGENHTALVTEKGQLYTFG 316

Query: 152 DGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
           DG   +LG  H  Y +   P +   F    V Q++CG  H +VL    L N
Sbjct: 317 DGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCHMIVLAYPRLQN 367


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +V++WG     QLG G  +  L P  +  NLS+   V+ +ACG  H L LTS      G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVTEVACGSYHSLVLTS-----DGE 172

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           VF+WG  +SGQ+G G   +   P+ VT    ++  + +I+ G   S  V ++G ++  G 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVNTGEVYVWGY 231

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
              GQLG G   +  +P ++++     + ++ACG  H+LVL  +    QVY +G+   GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           LG      +S   P V      +EI    +    SAA +  GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPAPVVVEKDRIVEIAACHS-AHTSAAKTQGGHVYMWGQ 336



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 20/266 (7%)

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
           + +  ++F  G    G LG G++   + P+ +    G +       +G  H    +  G 
Sbjct: 61  TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSG-PHIVLATTEGE 119

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           +FT G   + QLG+G       P  +S+   NK V ++ACG  HSLVL  D    +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAW 176

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
           G    GQ+G      + +   +VT  L +  +V I+     S A+   G +Y WG     
Sbjct: 177 GYNNSGQVGSGSTANQPIPR-RVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 235

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G  S+ +   P  + +   +   + A G+ H LVLT +G+V   G + +G L    + 
Sbjct: 236 QLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA 343
           + + P  V +EK       ++++IAA
Sbjct: 296 NQSYPAPVVVEK------DRIVEIAA 315


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 179/434 (41%), Gaps = 94/434 (21%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           WG G  G+LG G L     P+L+N SS   S++  ++CGGAH L LT       G+V++ 
Sbjct: 35  WGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTET-----GRVYAT 89

Query: 97  GRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G    GQLG        + P  V+   G +  I  ISAG++HS  ++  G L+T G  + 
Sbjct: 90  GLNDFGQLGVSNNTTYCMEPLEVS---GLKKEIVQISAGYHHSCAITVDGELYTWGKNSN 146

Query: 156 GQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           GQLG G    +  PV  KV      N+  +A    HS+ +     G Q   +G G  G+L
Sbjct: 147 GQLGLGKKAENVVPVPTKVECLSGINIKMVALASEHSIAVTD---GGQALSWGGGGSGRL 203

Query: 214 GVSKD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
           G           R  S   P+    L  +++  I+A    SA +   G +Y +G      
Sbjct: 204 GHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDK 263

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSD------ 313
             F   ++   P S+   L +SQ  A G  H  V+T  GE+   G + +G L +      
Sbjct: 264 LAFGDANNATTP-SMIGKLPYSQEVACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVL 322

Query: 314 --PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
             PERV     L   +EKVS            G +H+A ++                   
Sbjct: 323 HIPERVEGPF-LRSPVEKVS-----------CGWKHTAAIS------------------- 351

Query: 372 FFINVIAENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                      + TWGWG              GQLG G+  D ++P +V     F+ +  
Sbjct: 352 --------EGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLV----AFEKKMK 399

Query: 420 QLEVFCGSGFTYAI 433
            LEV CG   T AI
Sbjct: 400 ALEVSCGFNHTGAI 413



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 21/172 (12%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           V+ +G     +L  G  ++  +P ++    L     +ACGG H   +TS     GG++++
Sbjct: 253 VYIFGEKAVDKLAFGDANNATTPSMI--GKLPYSQEVACGGYHTCVITS-----GGELYT 305

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---- 151
           WG   +G LG+G  +D L+          R  +  +S GW H+  +S+ G +FT G    
Sbjct: 306 WGSNENGCLGNGS-IDVLHIPERVEGPFLRSPVEKVSCGWKHTAAISE-GNVFTWGWGGS 363

Query: 152 DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
            GTF        GQLGHGD   + +P  V+        +++CG  H+  +L+
Sbjct: 364 HGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAILE 415


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 75/366 (20%)

Query: 93  VFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
           V +WG G  GQLG G         +V AL P          Y +  + AG  +S  + D 
Sbjct: 7   VIAWGSGEDGQLGIGNNEEKEWVCIVKALEP----------YKVRSVVAGSRNSLAICDD 56

Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           G LFT G    G LGH  + ++ + P +V +  N N+ Q A G  H L +  D  G + Y
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAV--DDQG-RAY 113

Query: 204 GFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
            +G  + GQ G   +R         R + +PQ       + +  ++A G  S  L+ EGH
Sbjct: 114 AWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCA--SKLVVRQVAAGGTHSVVLTREGH 171

Query: 256 LYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           +++WG+ +       ++ P  +         A+G  H L L  DG +   G + +G L  
Sbjct: 172 VWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGT 231

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFF 373
            +    ++P++V       L G+ ++ IAAG  HS  +T                     
Sbjct: 232 GDTQPRSQPITV-----QGLSGLTLVDIAAGGWHSTALT--------------------- 265

Query: 374 INVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNL--GDEFQNRDTQLEVFCGSGF 429
                ++  +  WG GEHG+LG G+     ++ P+ VNL  G++       ++V CG   
Sbjct: 266 -----DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDI------VQVSCGGTH 314

Query: 430 TYAISR 435
           + A++R
Sbjct: 315 SVALTR 320



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 133/311 (42%), Gaps = 33/311 (10%)

Query: 35  KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           K+++WG    G LG       E  P  +   +  ++   A GG H LA+        G+ 
Sbjct: 58  KLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQ-----GRA 112

Query: 94  FSWGRGSSGQLGHGEMVDALYPKP------VTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
           ++WG    GQ G          +P      +      +  +  ++AG  HS  ++  G +
Sbjct: 113 YAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHV 172

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           ++ G         GD +  S PV+V     + V  IA G  H+L L +D     ++ +G+
Sbjct: 173 WSWGQ----PWPPGDIKQISVPVRVQGL--ERVRLIAVGAFHNLALQED---GTLWAWGN 223

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
            + GQLG    + RS   P    GL  + +V I+A G  S AL+ +G +Y WGRG     
Sbjct: 224 NEYGQLGTGDTQPRS--QPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 281

Query: 264 ----NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
               N  S    PQ  +L       Q + G  H + LT DG +   G   HG L    +V
Sbjct: 282 GFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKV 341

Query: 318 SSTRPLSVALE 328
           ++ +P+ V ++
Sbjct: 342 TTGQPMEVPID 352



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 128/297 (43%), Gaps = 40/297 (13%)

Query: 35  KVWSWGAGTDGQLG--------TGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           + ++WG    GQ G        TGR    D + PQ    +S   V  +A GG H + LT 
Sbjct: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQ--RCASKLVVRQVAAGGTHSVVLTR 168

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
                 G V+SWG+        G++     P  V   +  R     I+ G  H+  + + 
Sbjct: 169 E-----GHVWSWGQ----PWPPGDIKQISVPVRVQGLERVRL----IAVGAFHNLALQED 215

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G L+  G+  +GQLG GD +  S P+ V       +  IA G  HS  L  D    +VYG
Sbjct: 216 GTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDD---GEVYG 272

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
           +G G+ G+LG   +   S  +PQ    L   +IV +S  G  S AL+ +G +YT+GRG  
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDH 332

Query: 263 --------FNSTSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
                     +   +  P  +  P +L+ S  A  W   LV +G    L +   H G
Sbjct: 333 GRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIVEWHTG 389


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 22/286 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++  G+   GQLG G       P  +       V   ACG  H L  T      GG V+
Sbjct: 141 KLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTE-----GGNVY 195

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  S GQLG G+  +      ++FF   RY I  +SAG N S  +++ G L+  GD +
Sbjct: 196 AAGGNSDGQLGLGDTEERTTFHQISFFTS-RYKIKQLSAGSNTSAALTEDGELYMWGDNS 254

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G     +   P +V   + K V  ++CG  HS ++  D    ++Y FG  + G+LG
Sbjct: 255 EGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVTTD---GELYTFGEPENGKLG 309

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVNC-- 271
           +S +++++  +PQ+  G+   ++  ++  G  + AL+ E  +YT+G G F       C  
Sbjct: 310 LSSEQLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEED-VYTFGLGEFGQLGLGTCIF 367

Query: 272 PQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGML 311
             S+P  +   +       A G NH  +++  G +   G   HG L
Sbjct: 368 ETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKL 413



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 136/317 (42%), Gaps = 50/317 (15%)

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           T+  +S G  H+ FV+ +  L+  G   +GQLG G   + + P  V +   + V   ACG
Sbjct: 122 TLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACG 181

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
             H+LV  +   G  VY  G    GQLG+     R+ +  Q++      +I  +SA  + 
Sbjct: 182 RNHTLVCTE---GGNVYAAGGNSDGQLGLGDTEERT-TFHQISFFTSRYKIKQLSAGSNT 237

Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
           SAAL+ +G LY WG       G  S S+V  P  +      S  + G+ H  ++T DGE+
Sbjct: 238 SAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVSCGYYHSALVTTDGEL 297

Query: 301 LMLGGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
              G   +G L    E++ + R   +    V  + G KV Q+A G  H+  +T       
Sbjct: 298 YTFGEPENGKLGLSSEQLKNHRIPQL----VPGISG-KVNQVACGGGHTVALT------- 345

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC--DQIHPKVVNLGDEFQNR 417
                                  + T+G GE GQLGLG TC  +   PKVV    E   +
Sbjct: 346 --------------------EEDVYTFGLGEFGQLGLG-TCIFETSVPKVV----EHLRK 380

Query: 418 DTQLEVFCGSGFTYAIS 434
                V CG   T  IS
Sbjct: 381 QKIHYVACGENHTALIS 397



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 14/164 (8%)

Query: 35  KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           +++++G   +G+LG  + +L +   PQL+   S   V+ +ACGG H +ALT         
Sbjct: 296 ELYTFGEPENGKLGLSSEQLKNHRIPQLVPGIS-GKVNQVACGGGHTVALTEED------ 348

Query: 93  VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           V+++G G  GQLG G  + +   PK V      +  I +++ G NH+  +SD+G ++T G
Sbjct: 349 VYTFGLGEFGQLGLGTCIFETSVPKVVEHL--RKQKIHYVACGENHTALISDTGLMYTFG 406

Query: 152 DGTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
           DG  G+LG G+  + +   P   S+F+  +VH +ACG  H LV 
Sbjct: 407 DGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVF 450



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 58/243 (23%)

Query: 36  VWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V++ G  +DGQLG G   +  +  Q+   +S   +  L+ G     ALT       G+++
Sbjct: 194 VYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTE-----DGELY 248

Query: 95  SWGRGSSGQLGHGEMVDALYP------KPVTFF------------DGHRYTITHISAGW- 135
            WG  S GQ+G     +   P      KPV++             DG  YT      G  
Sbjct: 249 MWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKL 308

Query: 136 --------NH---------SGFVSDSGC------------LFTCGDGTFGQLGHGDYRSH 166
                   NH         SG V+   C            ++T G G FGQLG G     
Sbjct: 309 GLSSEQLKNHRIPQLVPGISGKVNQVACGGGHTVALTEEDVYTFGLGEFGQLGLGTCIFE 368

Query: 167 SSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
           +S  KV   + K  +H +ACG  H+ ++    L   +Y FG G+ G+LG+ ++   +  +
Sbjct: 369 TSVPKVVEHLRKQKIHYVACGENHTALISDTGL---MYTFGDGRHGKLGLGEENFTNQFI 425

Query: 226 PQV 228
           P +
Sbjct: 426 PTL 428



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 87/222 (39%), Gaps = 58/222 (26%)

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY---- 257
           V+ FG  K  +   SK  +R+ +L Q++ G             + +A ++    LY    
Sbjct: 100 VFTFGKSKFAENIPSKFWLRNDTLAQLSCG------------DEHTAFVTGNSKLYMLGS 147

Query: 258 -TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
             WG+ G  S + VN P  +    P  + F  AA G NH LV T  G V   GG+  G L
Sbjct: 148 NNWGQLGLGSKTTVNKPTCVKALKPEKVKF--AACGRNHTLVCTEGGNVYAAGGNSDGQL 205

Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
              D E  ++   +S    +       K+ Q++AG+  SA +T                 
Sbjct: 206 GLGDTEERTTFHQISFFTSRY------KIKQLSAGSNTSAALT----------------- 242

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
                    E+  +  WG    GQ+GL +  +   P  V +G
Sbjct: 243 ---------EDGELYMWGDNSEGQIGLASESNVCVPCRVVIG 275


>gi|356560879|ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814063 [Glycine max]
          Length = 1080

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 43/349 (12%)

Query: 23  KIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLAL 82
           ++  +E      +V+SWG+G + QLGTG  H +  P  ++    S + +++ G  H +AL
Sbjct: 143 QVLRDEHSSVATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVAL 202

Query: 83  TSPSSVIGGKVFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWN 136
           T+      G+V++WG G  G+LGH +          + P+ VT   G R  +  I+A  +
Sbjct: 203 TA-----RGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMA-IAAAKH 256

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           H+   +  G +FT G    GQLG+    +  +P +VSS  ++ V  +A   +H+ V+   
Sbjct: 257 HTVISTQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSLRSRIV-AVAAANKHTAVV--S 313

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
            LG +V+ +G  + GQLG       S   P V   L    +  +SA    +  L ++G +
Sbjct: 314 DLG-EVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKTLTRVSAAKYHTIVLGSDGEV 372

Query: 257 YTWGRGFNSTSDVNCPQSLPSS------------LSFSQAALGWNHVLVLTGDGEVLMLG 304
           +TWG    +   V   ++L  S            L+    A G  H + LT DG +    
Sbjct: 373 FTWGHRLVTPKRVVVSRNLKKSGSTPLKFHRKERLNVVSIAAGMVHSMALTDDGALF--- 429

Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
              + + SDP+         +  +++  + G  ++ I+AG   +A VT 
Sbjct: 430 ---YWVSSDPD---------LRCQQLYAMCGRNMVSISAGKYWTAAVTA 466



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 148/318 (46%), Gaps = 37/318 (11%)

Query: 65  SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
           S S + +    G+    L    S +  +VFSWG G++ QLG G       P  V    G 
Sbjct: 128 SKSRIPVDLLSGSVFQVLRDEHSSVATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLGGS 187

Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS------SPVKVSSFV-N 177
              I  ISAG  HS  ++  G ++T G G  G+LGH D+  HS      +P +V+S + +
Sbjct: 188 --FIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGS 245

Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
           + V  IA    H+++      G +V+ +GS + GQLG     + +   P+    L    I
Sbjct: 246 RRVMAIAAAKHHTVI---STQGGEVFTWGSNREGQLGYPS--VDTQPTPRRVSSLRS-RI 299

Query: 238 VGISANGDRSAALSAEGHLYTWG------RGF-NSTSDVNCPQSLPSSL---SFSQAALG 287
           V ++A    +A +S  G ++TWG       G+  S S  N    +  SL   + ++ +  
Sbjct: 300 VAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKTLTRVSAA 359

Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL----SVALEKVSNLDGVKVIQIAA 343
             H +VL  DGEV   G   H +++ P+RV  +R L    S  L K    + + V+ IAA
Sbjct: 360 KYHTIVLGSDGEVFTWG---HRLVT-PKRVVVSRNLKKSGSTPL-KFHRKERLNVVSIAA 414

Query: 344 GAEHSAVVTGK---FHWV 358
           G  HS  +T     F+WV
Sbjct: 415 GMVHSMALTDDGALFYWV 432



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 54/237 (22%)

Query: 193 LLKD---CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           +L+D    +  +V+ +GSG   QLG     I+ +     ++G   I++  ISA    S A
Sbjct: 144 VLRDEHSSVATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLGGSFIKL--ISAGKFHSVA 201

Query: 250 LSAEGHLYTWGRG------------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVL 294
           L+A G +YTWG G             +  + V  P+ + S L   +    A   +H ++ 
Sbjct: 202 LTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIAAAKHHTVIS 261

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
           T  GEV   G +  G L  P   +   P      +VS+L   +++ +AA  +H+AVV+  
Sbjct: 262 TQGGEVFTWGSNREGQLGYPSVDTQPTP-----RRVSSLRS-RIVAVAAANKHTAVVSD- 314

Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                                 + E   + TWG    GQLG G  N+     P VV 
Sbjct: 315 ----------------------LGE---VFTWGCNREGQLGYGTSNSASNYTPHVVE 346


>gi|431921464|gb|ELK18834.1| Secretion-regulating guanine nucleotide exchange factor [Pteropus
           alecto]
          Length = 343

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 130/288 (45%), Gaps = 25/288 (8%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           WGA + GQLG G   D L PQ L +      V  +  GG H   +T      GG +F  G
Sbjct: 20  WGANSYGQLGLGHKEDVLLPQQLSDFCEPGRVRRITGGGGHSAVVTD-----GGSLFVCG 74

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
               GQLG G   D LY  P     G    I  ++ GW+ +  ++++G + +CG  +FGQ
Sbjct: 75  LNKDGQLGLGHTEDVLYFTPCKSLLG--CPIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132

Query: 158 LG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRGQ 212
           LG  HG  R  +   +   F+ + V  IA G+RH+LV     L  Q +G G   SG+R  
Sbjct: 133 LGVPHGPRRCMAP--QAIEFLREKVVSIAAGLRHALVATASGLVFQ-WGTGLASSGRRLC 189

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSD 268
            G       +   P    GL + + V + A    SA+++  G LY WG    R   S + 
Sbjct: 190 PGQILPLFWTAKEPSRVTGLENSKAVCVVAGAGHSASVTDAGELYVWGSNKHRQLASQAA 249

Query: 269 -VNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML 311
            +  PQ + +    ++       GW H++  T  G+V   G + +G L
Sbjct: 250 FLPMPQKIEAHYFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQL 297



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 136/319 (42%), Gaps = 59/319 (18%)

Query: 96  WGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG--- 151
           WG  S GQLG G   D L P+ ++ F +  R  +  I+ G  HS  V+D G LF CG   
Sbjct: 20  WGANSYGQLGLGHKEDVLLPQQLSDFCEPGR--VRRITGGGGHSAVVTDGGSLFVCGLNK 77

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           DG  G LGH +   + +P K  S +   + Q+ACG   +++L ++    QV   GS   G
Sbjct: 78  DGQLG-LGHTEDVLYFTPCK--SLLGCPIQQVACGWDFTIILTEN---GQVLSCGSNSFG 131

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLGV     R ++ PQ    L + ++V I+A    +   +A G ++ WG G  S+    C
Sbjct: 132 QLGVPHGPRRCMA-PQAIEFLRE-KVVSIAAGLRHALVATASGLVFQWGTGLASSGRRLC 189

Query: 272 P-QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           P Q LP           + L  S+A     G  H   +T  GE+ + G + H  L+    
Sbjct: 190 PGQILPLFWTAKEPSRVTGLENSKAVCVVAGAGHSASVTDAGELYVWGSNKHRQLASQ-- 247

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
            ++  P+   +E        KV  + +G  H    T                        
Sbjct: 248 -AAFLPMPQKIE-AHYFQNEKVTAVWSGWTHLVAQT------------------------ 281

Query: 377 IAENRAIMTWGWGEHGQLG 395
             E   + TWG  ++GQLG
Sbjct: 282 --ETGKVFTWGRADYGQLG 298


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 179/435 (41%), Gaps = 97/435 (22%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLNL---SSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           WG G  G+LG G L    SP              + L+CGGAH L LT      GG+VF+
Sbjct: 36  WGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTE-----GGRVFA 90

Query: 96  WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            G    GQLG G  M   L P  V+ F      +  ISAG +HS  V+  G LF  G  +
Sbjct: 91  TGLNDFGQLGIGSSMPHTLDPVEVSGF---HEKVVQISAGNHHSCAVTADGELFVWGKNS 147

Query: 155 FGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            GQLG G       S+P KV    +  V   A G  HS+V+ +D    +   +G+   G+
Sbjct: 148 SGQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTED---GEALSWGAAGGGR 204

Query: 213 LGVS-KDRIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
           LG   K      ++      P++   L  I+I  I+A    SA +  +G ++ +G+    
Sbjct: 205 LGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQKTEK 264

Query: 263 -FNSTSDVNCPQSLPSSLSFS-QAALGWNHVLVLTGDGEV----------LMLGGSHHGM 310
               ++D   P S+   + FS + A G  H   +T  G++          L LGG+  GM
Sbjct: 265 VLGRSNDAPRP-SVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGT--GM 321

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           +  PE VSS+            L  + V +++ G +H+AV++G+                
Sbjct: 322 VRFPEVVSSS------------LFKLPVSKVSCGWKHTAVISGE---------------- 353

Query: 371 PFFINVIAENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRD 418
                       I TWGWG              GQLG GN  D   P +V    E     
Sbjct: 354 -----------DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYCEPMMV----ELHKNA 398

Query: 419 TQLEVFCGSGFTYAI 433
             + V CG   T AI
Sbjct: 399 RAVHVSCGFNHTGAI 413



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 23/159 (14%)

Query: 50  GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
           GR +D   P ++     S    +ACGG H  A+T       G ++SWG   +G LG G  
Sbjct: 267 GRSNDAPRPSVVEEIQFSE--EVACGGYHTCAVTDR-----GDLYSWGSNENGCLGLGGT 319

Query: 110 VDALYPKPVT--FFDGHRYTITHISAGWNHSGFVSD-----------SGCLFTCGDGTFG 156
               +P+ V+   F   +  ++ +S GW H+  +S            +G  F  G  + G
Sbjct: 320 GMVRFPEVVSSSLF---KLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGHSSGG 376

Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           QLGHG+   +  P+ V    N     ++CG  H+  +L+
Sbjct: 377 QLGHGNDVDYCEPMMVELHKNARAVHVSCGFNHTGAILE 415


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 148/336 (44%), Gaps = 52/336 (15%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRY 126
            V  +ACG  H L L        G+VF+WG     ++G          P+ V+   G + 
Sbjct: 261 KVKQVACGDYHTLCLMQ-----DGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQ- 314

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDG----TFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
            I HI  G  HS  +   G +++ G G      GQ GHG+      P++V    ++ + Q
Sbjct: 315 -IVHIDCGDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQ 373

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV------SKDRIRSVSLPQVTIGLHDIE 236
           I+ G  H+L L ++   N++Y +GSG  G+ G+      SK +I  V +P+  +   ++ 
Sbjct: 374 ISAGGFHTLALCEE--DNELYAWGSGTYGECGLGEFQASSKPKI--VKMPKDFVSNQEMN 429

Query: 237 --------------IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP 276
                         I  ISA G  +  L++ G +Y++G G        ST +   PQ + 
Sbjct: 430 QMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVK 489

Query: 277 SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
             LS +  A+  GWNH L+L+  G++   G  +HG L   ++   T+        V+NL 
Sbjct: 490 DLLSKNIKAIAAGWNHSLILSDKGDLFACGYGNHGQLGLNDKEPRTQ-----FTHVANLG 544

Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           G     I AG  HS VV      VR    +Y P  P
Sbjct: 545 GKNAYNIYAGGNHSWVVIDDLMPVR---DNYRPPSP 577



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 65/351 (18%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           ++S+G+ S G+LG     D   PKP++  +    +T  +IS+G +HS  V+ +G L+  G
Sbjct: 168 IWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSG 227

Query: 152 DGTFGQLGHGDYRSH--SSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
               G+LG         S   +V+ F    VN+ V Q+ACG  H+L L++D    QV+ +
Sbjct: 228 SQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQD---GQVFAW 284

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
           G     ++G  K+     + P++  GL   +IV I      S AL  +G +Y+WG G   
Sbjct: 285 GGTLHKKVG-EKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGAS 343

Query: 263 FN-------STSDVNCPQSLP--SSLSFSQAALGWNHVLVL-TGDGEVLMLGGSHHGMLS 312
           +N       +  D+  P  +   +     Q + G  H L L   D E+   G   +G   
Sbjct: 344 YNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSGTYGECG 403

Query: 313 DPERVSSTRPLSVALEK--VSNLDGVK-------------VIQIAAGAEHSAVVTGKFHW 357
             E  +S++P  V + K  VSN +  +             + QI+AG  H+ ++T +   
Sbjct: 404 LGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSR--- 460

Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                    + ++G+G HGQLGL +T +   P++V
Sbjct: 461 -----------------------GRVYSFGYGSHGQLGLRSTKNFCSPQLV 488



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 27/184 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSP----------------QLLNLSSLSS----VSMLAC 74
           ++++WG+GT G+ G G       P                Q+ N  + SS    ++ ++ 
Sbjct: 390 ELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISA 449

Query: 75  GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
           GG H L LTS      G+V+S+G GS GQLG     +   P+ V   D     I  I+AG
Sbjct: 450 GGHHTLLLTSR-----GRVYSFGYGSHGQLGLRSTKNFCSPQLVK--DLLSKNIKAIAAG 502

Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           WNHS  +SD G LF CG G  GQLG  D    +    V++   KN + I  G  HS V++
Sbjct: 503 WNHSLILSDKGDLFACGYGNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGGNHSWVVI 562

Query: 195 KDCL 198
            D +
Sbjct: 563 DDLM 566



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 97/265 (36%), Gaps = 62/265 (23%)

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG----ISANGDRSAALSAEGHLY 257
           ++ FG    G+LG+S  + + +  P   I + ++++      IS+    SA ++  G LY
Sbjct: 168 IWSFGKNSDGELGISSQKDQFLPKP---ISIQNLKLSHTAKYISSGSHHSAIVTKAGELY 224

Query: 258 TWGR------GFNST--------SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
             G       G  S         + V     +  +    Q A G  H L L  DG+V   
Sbjct: 225 VSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQVFAW 284

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV--VTGK-FHW--- 357
           GG+ H  + +    +      +    VS L G +++ I  G  HS    + G+ + W   
Sbjct: 285 GGTLHKKVGEKNAQAQNNEPRI----VSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGG 340

Query: 358 ----------------------------VRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
                                        ++  IS   F     + +  E+  +  WG G
Sbjct: 341 GASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHT---LALCEEDNELYAWGSG 397

Query: 390 EHGQLGLGNTCDQIHPKVVNLGDEF 414
            +G+ GLG       PK+V +  +F
Sbjct: 398 TYGECGLGEFQASSKPKIVKMPKDF 422


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 13/227 (5%)

Query: 37  WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +S G  + GQLG  R      P+ +   +   V +++CG  H +A+        GKVF W
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHK-----GKVFPW 55

Query: 97  GRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           G GS GQLG GE  + +  P  +    G +  I  +S G  HS  +S+ G +F+ G  + 
Sbjct: 56  GAGSEGQLGIGEFKEISFMPTKIKALAGIK--IIQVSCGHYHSLALSEDGHVFSWGRNSE 113

Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           GQLG G + RS + P KV S     + Q+A G  HS  L    L    +G+GS + GQL 
Sbjct: 114 GQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---SLTGTSFGWGSNRSGQLA 170

Query: 215 VSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           +S ++++  +  P     L ++ ++ IS   + +A L+ EG ++T+G
Sbjct: 171 LSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 217



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 139/305 (45%), Gaps = 34/305 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
           KV+ WGAG++GQLG G    E+S     + +L+ + ++  +CG  H LAL+       G 
Sbjct: 51  KVFPWGAGSEGQLGIGEF-KEISFMPTKIKALAGIKIIQVSCGHYHSLALSE-----DGH 104

Query: 93  VFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           VFSWGR S GQLG G+   +   P+ V   +G    +  ++AG  HS  +S +G  F  G
Sbjct: 105 VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEG--IPLAQVAAGGTHSFALSLTGTSFGWG 162

Query: 152 DGTFGQL---GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
               GQL   G+        P  + +  N +V  I+CG  H+ VL ++    QV+ FG  
Sbjct: 163 SNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE---GQVFTFGGN 219

Query: 209 KRGQLGVSKDRIRSVSL-PQVTIGL----HDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
             GQL  S    RS    PQ+  G+      IE     A+    A +   G + + GRG 
Sbjct: 220 SSGQLQPSP---RSGQRGPQLIEGIGGRVSQIE----CASYHTIAYVYTTGQVVSLGRGP 272

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
           + TS+    Q  P+  S     L    ++    D EV  +    H       RVS TR  
Sbjct: 273 SHTSNPT-HQEAPAENSDITCLLAAEDLV----DIEVKDIFAGAHANFVTTRRVSHTRST 327

Query: 324 SVALE 328
            V+++
Sbjct: 328 GVSMK 332



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 23/218 (10%)

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           ++CGD ++GQLG    +S   P  + +  + +V  ++CG  HS+ +   C   +V+ +G+
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAV---CHKGKVFPWGA 57

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
           G  GQLG+ + +  S  +P     L  I+I+ +S     S ALS +GH+++WGR      
Sbjct: 58  GSEGQLGIGEFKEISF-MPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQL 116

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DP 314
             G NS S    PQ + S   +  +Q A G  H   L+  G     G +  G L+   + 
Sbjct: 117 GLGKNSRSQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNK 175

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +    +P S+       L  + VI I+ G EH+AV+T
Sbjct: 176 VKEQIYKPHSIG-----ALKNLSVIYISCGYEHTAVLT 208


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 16/232 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
           KV+SWG     +LG    ++ L+P L+  S+L++  V  +ACGG H LALT+      G+
Sbjct: 100 KVYSWGYNDYCELGNRSTNEGLTPTLIP-SALNNEFVVDIACGGHHSLALTNK-----GE 153

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTF---FDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           V++WG   SGQ+G G ++  + P P       +G +  + HIS G + S  V+D+G +++
Sbjct: 154 VYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKK--VVHISCGDSSSVAVTDNGEVYS 211

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
            G    GQLG G+  S + P KV++F    + ++ CG  H+L L  +     +Y +G+  
Sbjct: 212 WGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDE---GDLYVWGANS 268

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            GQLG++ D    +        +  I  +  S     S A+S    ++ WG+
Sbjct: 269 YGQLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ 320



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 112/250 (44%), Gaps = 21/250 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKVF 94
           V+  G  T G LGTG  H  + P+ +      SV   A G G HVLALT       GKV+
Sbjct: 48  VYGIGNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEE-----GKVY 102

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWG     +LG+    + L P  +     + + +  I+ G +HS  +++ G ++  G   
Sbjct: 103 SWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVD-IACGGHHSLALTNKGEVYAWGHNV 161

Query: 155 FGQLGHGDYRSHSSPV-KVSSFV--NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            GQ+G G   S   P+ K+   V   K V  I+CG   S+ +  +    +VY +G    G
Sbjct: 162 SGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDN---GEVYSWGHNGVG 218

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           QLG+      S + PQ       I I  +      + ALS EG LY WG       G N+
Sbjct: 219 QLGIG--NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNT 276

Query: 266 TSDVNCPQSL 275
            S+V  P  L
Sbjct: 277 DSNVWIPTKL 286



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 104/255 (40%), Gaps = 47/255 (18%)

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS-ANGDRSA 248
           +L++ KD   + VYG G+   G LG       S   P+    L    +   +   G    
Sbjct: 39  TLIVTKD---DMVYGIGNNTYGCLGTGDTH--STIYPKKIEALCGKSVKTFAYGKGPHVL 93

Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGE 299
           AL+ EG +Y+WG       G  ST++   P  +PS+L+       A G +H L LT  GE
Sbjct: 94  ALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGE 153

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVR 359
           V   G +  G +     +S+ +P+   L  V  L+G KV+ I+ G   S  VT       
Sbjct: 154 VYAWGHNVSGQVGCGTILSTVQPIPKLLHIV--LNGKKVVHISCGDSSSVAVT------- 204

Query: 360 LFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 419
                              +N  + +WG    GQLG+GN   Q  P+ V    +      
Sbjct: 205 -------------------DNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIE-- 243

Query: 420 QLEVFCGSGFTYAIS 434
             +V CG   T A+S
Sbjct: 244 --KVVCGYMHTLALS 256



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 115/299 (38%), Gaps = 55/299 (18%)

Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
           L PK   F    R  I +  A  N +  V+    ++  G+ T+G LG GD  S   P K+
Sbjct: 18  LEPK---FISNVRMAIVYGKAA-NETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKI 73

Query: 173 SSFVNKNVHQIACGM-RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
            +   K+V   A G   H L L ++    +VY +G     +LG ++     ++   +   
Sbjct: 74  EALCGKSVKTFAYGKGPHVLALTEE---GKVYSWGYNDYCELG-NRSTNEGLTPTLIPSA 129

Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC------PQSLPSSLSFSQAA 285
           L++  +V I+  G  S AL+ +G +Y WG   N +  V C       Q +P  L      
Sbjct: 130 LNNEFVVDIACGGHHSLALTNKGEVYAWGH--NVSGQVGCGTILSTVQPIPKLLHIVLNG 187

Query: 286 LGWNHV-------LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
               H+       + +T +GEV   G +  G L      S   P     +KV+    + +
Sbjct: 188 KKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQAEP-----QKVATFAKIVI 242

Query: 339 IQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG 397
            ++  G  H+                            +++   +  WG   +GQLGL 
Sbjct: 243 EKVVCGYMHTLA--------------------------LSDEGDLYVWGANSYGQLGLN 275


>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
          Length = 585

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 137/292 (46%), Gaps = 20/292 (6%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSV--IGGK 92
           V++ G+   G LGTG  H  L P+ ++      + M A G G HVLALT    V     K
Sbjct: 91  VYALGSNIAGCLGTGDAHSTLYPKKVDALCEKDIKMFAYGSGPHVLALTKEGEVRLYLRK 150

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V+SWG     +LG+G     LYP  V      R  I  I+ G +HS  +++ G ++  G 
Sbjct: 151 VYSWGHNGYCELGNGTCNQGLYPTQVNSLGIKR--IVDIACGSHHSVALNEDGEIYAWGQ 208

Query: 153 GTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
              GQ G     +   P +V+S    K V QIACG   ++ LL++    +VYG+G    G
Sbjct: 209 NNCGQAGSSITTNQGVPRQVNSNLAGKKVAQIACGQTSTVALLEN---GEVYGWGYNGVG 265

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNS 265
           QLG+  + +  ++  ++   L  + IV ++     + AL+ EG LY WG       G ++
Sbjct: 266 QLGIG-NYVNQMTPCRIGTLLGTV-IVKVACGYVHTLALTDEGQLYVWGGNSYGQLGISN 323

Query: 266 TSDVNCPQSLPSSLSFSQ--AALGWNHVLVLTGD-GEVLMLGGSHHGMLSDP 314
            ++   P  +   +      AAL +NH  V  G+ G V M G      ++ P
Sbjct: 324 KTNACNPVLVKHEMGRVSDIAALHYNHTSVAVGEGGRVYMWGHCRGQSITTP 375



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 14/253 (5%)

Query: 25  EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
           +E E    + KV+SWG     +LG G  +  L P  +N   +  +  +ACG  H +AL  
Sbjct: 140 KEGEVRLYLRKVYSWGHNGYCELGNGTCNQGLYPTQVNSLGIKRIVDIACGSHHSVALNE 199

Query: 85  PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSD 143
                 G++++WG+ + GQ G     +   P+ V +   G +  +  I+ G   +  + +
Sbjct: 200 D-----GEIYAWGQNNCGQAGSSITTNQGVPRQVNSNLAGKK--VAQIACGQTSTVALLE 252

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
           +G ++  G    GQLG G+Y +  +P ++ + +   + ++ACG  H+L L  +    Q+Y
Sbjct: 253 NGEVYGWGYNGVGQLGIGNYVNQMTPCRIGTLLGTVIVKVACGYVHTLALTDE---GQLY 309

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--R 261
            +G    GQLG+S ++  + +   V   +  +  +        S A+   G +Y WG  R
Sbjct: 310 VWGGNSYGQLGIS-NKTNACNPVLVKHEMGRVSDIAALHYNHTSVAVGEGGRVYMWGHCR 368

Query: 262 GFNSTSDVNCPQS 274
           G + T+    P S
Sbjct: 369 GQSITTPTATPFS 381



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 111/287 (38%), Gaps = 47/287 (16%)

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM-RHSLVLL 194
           N +  V+    ++  G    G LG GD  S   P KV +   K++   A G   H L L 
Sbjct: 80  NEALIVTRDKMVYALGSNIAGCLGTGDAHSTLYPKKVDALCEKDIKMFAYGSGPHVLALT 139

Query: 195 KD----CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           K+        +VY +G     +LG           P     L    IV I+     S AL
Sbjct: 140 KEGEVRLYLRKVYSWGHNGYCELG--NGTCNQGLYPTQVNSLGIKRIVDIACGSHHSVAL 197

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVL 301
           + +G +Y WG+      G + T++   P+ + S+L+    +Q A G    + L  +GEV 
Sbjct: 198 NEDGEIYAWGQNNCGQAGSSITTNQGVPRQVNSNLAGKKVAQIACGQTSTVALLENGEVY 257

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
             G +  G L     V+   P      ++  L G  ++++A G  H+  +T         
Sbjct: 258 GWGYNGVGQLGIGNYVNQMTPC-----RIGTLLGTVIVKVACGYVHTLALT--------- 303

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                            +   +  WG   +GQLG+ N  +  +P +V
Sbjct: 304 -----------------DEGQLYVWGGNSYGQLGISNKTNACNPVLV 333


>gi|242047524|ref|XP_002461508.1| hypothetical protein SORBIDRAFT_02g003750 [Sorghum bicolor]
 gi|241924885|gb|EER98029.1| hypothetical protein SORBIDRAFT_02g003750 [Sorghum bicolor]
          Length = 1049

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 160/362 (44%), Gaps = 45/362 (12%)

Query: 28  EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
           E+ +    V++WG+ T+ QLGTG  H +  P  ++    S +  +A    H +A++    
Sbjct: 124 EDTKVATDVFTWGSATNYQLGTGNAHIQKLPCKVDTLHGSYIKTVAASKFHSVAVS---- 179

Query: 88  VIGGKVFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
              G++++WG G  G+LGH     G+    + P+ VT   G R  +  ++A  +H+   +
Sbjct: 180 -YDGELYTWGFGRGGRLGHPDIQSGQTTAVITPRQVTVGLG-RKRVNVVAAAKHHTVIAT 237

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           ++G LFT G    GQLG+    +  +P +VSS   + +  +A   +HS  +       +V
Sbjct: 238 ETGELFTWGSNREGQLGYPSVDTQPTPRRVSSL-KQRIISVAAANKHSAAVADT---GEV 293

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G  K GQLG       S  +P++   L      G+SA    +  L  +G +++WG  
Sbjct: 294 FTWGCNKEGQLGYGTSNSASNCMPRMVEYLKGKVFRGVSAAKYHTIVLGVDGEVFSWGHR 353

Query: 263 FNSTSDVNCPQSLP----SSLSFSQ--------AALGWNHVLVLTGDGEVLMLGGSHHGM 310
             +   V   + L     ++L F +         A G  H   LT DG +       + +
Sbjct: 354 LVTPRRVVVARCLKKGGNTNLKFHRMERLQVISVAAGTTHSTALTADGALF------YWV 407

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFIISYTP 367
            SDP+         +  +++ ++ G  ++ I+AG   +AV T     F W         P
Sbjct: 408 SSDPD---------LKCQQIFSMCGRDIVNISAGKYWTAVATSTGDVFMWDAKKRKDEMP 458

Query: 368 FF 369
            F
Sbjct: 459 IF 460



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 147/336 (43%), Gaps = 40/336 (11%)

Query: 44  DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
           DG+ G   LH     + L+   L    +L   GA   +LT   + +   VF+WG  ++ Q
Sbjct: 91  DGESGWSSLH-----RALHFGHLCIAGVLLQFGA---SLTLEDTKVATDVFTWGSATNYQ 142

Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
           LG G       P  V     H   I  ++A   HS  VS  G L+T G G  G+LGH D 
Sbjct: 143 LGTGNAHIQKLPCKVDTL--HGSYIKTVAASKFHSVAVSYDGELYTWGFGRGGRLGHPDI 200

Query: 164 RSHS-----SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           +S       +P +V+  + +    +    +H  V+  +    +++ +GS + GQLG    
Sbjct: 201 QSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATET--GELFTWGSNREGQLGYPS- 257

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF-NSTSDVNC 271
            + +   P+    L    I+ ++A    SAA++  G ++TWG       G+  S S  NC
Sbjct: 258 -VDTQPTPRRVSSLKQ-RIISVAAANKHSAAVADTGEVFTWGCNKEGQLGYGTSNSASNC 315

Query: 272 PQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              +   L    F   +    H +VL  DGEV   G   H +++ P RV   R L     
Sbjct: 316 MPRMVEYLKGKVFRGVSAAKYHTIVLGVDGEVFSWG---HRLVT-PRRVVVARCLKKGGN 371

Query: 329 ---KVSNLDGVKVIQIAAGAEHSAVVTGK---FHWV 358
              K   ++ ++VI +AAG  HS  +T     F+WV
Sbjct: 372 TNLKFHRMERLQVISVAAGTTHSTALTADGALFYWV 407



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 93/236 (39%), Gaps = 50/236 (21%)

Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
           SL L    +   V+ +GS    QLG     I+   LP     LH   I  ++A+   S A
Sbjct: 120 SLTLEDTKVATDVFTWGSATNYQLGTGNAHIQK--LPCKVDTLHGSYIKTVAASKFHSVA 177

Query: 250 LSAEGHLYTWGRGFN-----------STSDVNCPQSLPSSLSFSQA---ALGWNHVLVLT 295
           +S +G LYTWG G              T+ V  P+ +   L   +    A   +H ++ T
Sbjct: 178 VSYDGELYTWGFGRGGRLGHPDIQSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIAT 237

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
             GE+   G +  G L  P   +   P      +VS+L   ++I +AA  +HSA V    
Sbjct: 238 ETGELFTWGSNREGQLGYPSVDTQPTP-----RRVSSLKQ-RIISVAAANKHSAAV---- 287

Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 409
                                 A+   + TWG  + GQLG G  N+     P++V 
Sbjct: 288 ----------------------ADTGEVFTWGCNKEGQLGYGTSNSASNCMPRMVE 321


>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
          Length = 427

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 146/346 (42%), Gaps = 45/346 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S   +   ACG  H LALT       G VF
Sbjct: 75  KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET-----GSVF 129

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 130 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKVACGAEFSMIMDCKGNLYSFGCPE 187

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 188 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 247

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 248 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGASQIYAGYTCS 301

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 302 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 361

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   +    +   S A ++V  LDGV   Q+A G  HS V+
Sbjct: 362 PTFGELGYGDHKPKS---STAAQEVKTLDGVFTEQVAMGYSHSLVI 404



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 154/379 (40%), Gaps = 63/379 (16%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
           AH L +T+      GK++SWGR   GQLGHG+      P+ +         I   + G N
Sbjct: 65  AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHE--VIVSAACGRN 117

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           H+  ++++G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++  
Sbjct: 118 HTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKVACGAEFSMIM-- 174

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E  
Sbjct: 175 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 222

Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
                     T D    Q LP  ++     A G NH LVL     V   G   +G L   
Sbjct: 223 ---------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 270

Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
           E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P 
Sbjct: 271 EQKDEMVP---RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 327

Query: 372 FFIN----------------VIAENRAIMTWGWG-EHGQLGLGNTCDQIHPKVVNLGDEF 414
              +                ++A + + ++WG     G+LG G+      PK      E 
Sbjct: 328 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 383

Query: 415 QNRDTQLEVFCGSGFTYAI 433
           +  D         G+++++
Sbjct: 384 KTLDGVFTEQVAMGYSHSL 402



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  +    ++ +   ACG  H+L L + 
Sbjct: 66  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 125

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 126 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKVACGAEFSMIMDCKGNL 180

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+            LG N       DG+ +        +  D E 
Sbjct: 181 YSFG----------CPE---------YGQLGHNS------DGKFI---ARAQRIEYDCEL 212

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ V+  +                 
Sbjct: 213 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 253

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 254 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAS-QIYAGYTCSF 302

Query: 432 AIS 434
           A+S
Sbjct: 303 AVS 305



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)

Query: 69  VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
           V  +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      
Sbjct: 237 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 291

Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
           + I AG+  S  VS+ G LF                              CG        
Sbjct: 292 SQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAA 351

Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                      TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 352 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVIARD 407


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 24/331 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V S G  + GQLG  R      P+ +      +V +++CG  H LA+        G+VF
Sbjct: 43  RVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCH-----KGRVF 97

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G  
Sbjct: 98  AWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGKN 155

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G +  S +SP +V S     + Q+A G  HS  L    L    +G+GS   GQ
Sbjct: 156 SHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAGQ 212

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           L +S   +   S   ++IG L ++ ++ IS   + +A L  +G ++T+G       G++ 
Sbjct: 213 LALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSP 272

Query: 266 TSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSSTR 321
           T +   PQ +       SQ   G  H L      G+V+    G S     + PE ++   
Sbjct: 273 TPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPSDKSKPTHPEALTGNF 332

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +   L    +L  V+V  I AG   + V T
Sbjct: 333 DIR-CLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 56/319 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG         P  + +    NV  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHS 140

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +  +++WG+  NS   +   + +PS  S            +Q A G  H   L+ 
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G +  G L+   R   V S +PLS+       L  + VI I+ G EH+A    
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG-----ALKNLGVIYISCGDEHTA---- 249

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                 V+ ++  + T+G    GQLG   T ++  P++V   D 
Sbjct: 250 ----------------------VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287

Query: 414 FQNRDTQLEVFCGSGFTYA 432
             +     ++ CGS  T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301


>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 1375

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 169/419 (40%), Gaps = 57/419 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V++WG G  G+LG G   D  +PQ ++      +  +  G     A+ S      G ++
Sbjct: 306 EVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAG-----AVVSEE----GFLY 356

Query: 95  SWGRGSSGQLGHGEMVDALYPKPV--TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +WG G++G LG+   +    P+ V  T  D   +TIT +S G  HS  +S +G LFT GD
Sbjct: 357 TWGDGAAGNLGYSNALRQFIPRRVEGTLLD---HTITQVSCGPYHSAALSSTGALFTWGD 413

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVY 203
           G  G+LGHG   S   P +V +  +K V  +ACG+ H+  +    +G            +
Sbjct: 414 GLCGKLGHGCLDSCLEPRQVDALKDKRVLHVACGVWHTAAIAAGPIGGSSLPSSLSELSF 473

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
                 R +L  +   +        T G H    V    N         + H    G G 
Sbjct: 474 QEAEALRHKLSAAYSMLDEEGGALFTWGGH-FTWVDHRKNSAGHPVDKRDHHRGCLGHG- 531

Query: 264 NSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLG--GSHHGMLSDPERVS 318
             T+    P  +  +L   +  Q   G N  + LT DG +  +G  G+    L+      
Sbjct: 532 -DTAGCLAPTRVGGALQGLAVRQVECGLNLTVALTADGRIWQMGETGAPGHKLA------ 584

Query: 319 STRPLSVALEKVS-NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
              P   A E V   +    V +IA G +H+A + G                        
Sbjct: 585 ---PWEGAREAVQVPIPDHYVERIAVGMQHAAALAGPLDGQT------------GRAEEG 629

Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           AE   I TWG G  GQLG+G   D   P  V   DE + R   L+V CG   T A+ RH
Sbjct: 630 AECSVIFTWGRGREGQLGVGMHADSAIPAPV---DELRGRHV-LQVACGGCHTLAVCRH 684



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 10/175 (5%)

Query: 91  GKVFSWGRGSSG-QLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
           G  + WG   +G     G + D      P    D     +  ++ G  H+  V+ SG ++
Sbjct: 249 GDCYVWGSSDAGIPPAQGSICDRQQSATPAIVEDSTHLDVCQVAVGLRHAALVTRSGEVY 308

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           T G+G  G+LG G      +P +V +   + +  I  G     V+ ++     +Y +G G
Sbjct: 309 TWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAGA----VVSEEGF---LYTWGDG 361

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
             G LG S + +R     +V   L D  I  +S     SAALS+ G L+TWG G 
Sbjct: 362 AAGNLGYS-NALRQFIPRRVEGTLLDHTITQVSCGPYHSAALSSTGALFTWGDGL 415


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 144/334 (43%), Gaps = 57/334 (17%)

Query: 36  VWSWGAGTDGQLGTG---------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
           V++WG+   GQLG           R+ D  +P   N   L ++  ++ G  H LAL S  
Sbjct: 637 VYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPN-KGLKAI-QVSAGDEHSLALDS-- 692

Query: 87  SVIGGKVFSWGRGSSGQLGHGEMVDALYP----KPVTFFDGHR-YTITHISAGWNHSGFV 141
               G V++WG   +G+LG+    D+  P     P +  D  +      +SAGW+HS  V
Sbjct: 693 ---NGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAV 749

Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-------VHQIACGMRHSLVLL 194
              G  +  G   +GQLG+    S S PV+V  F + N         Q++ G  HSL + 
Sbjct: 750 GSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVG 809

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKD-------RIRSVSLPQ-VTIGLHDIEIVGISANGDR 246
            D      Y +G    GQLG S         R+R  + P+  + GL   +   I+A G+ 
Sbjct: 810 SDGY---TYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGL---KATAINAGGEH 863

Query: 247 SAALSAEGHLYTW--------GRGFNSTSDVNCPQSLPSS-------LSFSQAALGWNHV 291
           S A+   G+ Y W        G G  S S V  P   P+S       L  ++ ++G +H 
Sbjct: 864 SLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFSVGDHHS 923

Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
           L +  +G     G + +G L D     S  P+SV
Sbjct: 924 LAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 136/352 (38%), Gaps = 66/352 (18%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLF 148
           GK ++WG  + GQLG         P  V    G    +T   +SAG  HS  +   G ++
Sbjct: 579 GKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVY 638

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-------NVHQIACGMRHSLVLLKDCLGNQ 201
             G    GQLG+    + S PV+V    N           Q++ G  HSL L  D  G  
Sbjct: 639 AWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLAL--DSNG-Y 695

Query: 202 VYGFGSGKRGQLGVSKD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
           VY +G    G+LG +         R+R  + P  T     ++ V +SA    S A+ ++G
Sbjct: 696 VYAWGWNDNGRLGNNSTTDSSVPVRVRDPASP--TDPSKGLKAVQVSAGWHHSLAVGSDG 753

Query: 255 HLYTWG---------RGFNSTS------DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
           + Y WG            NS+S      D   P      L   Q + G++H L +  DG 
Sbjct: 754 YTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGY 813

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD---GVKVIQIAAGAEHSAVVTGKFH 356
               G +++G L +   V ST P+ V  +  S  D   G+K   I AG EHS  V     
Sbjct: 814 TYAWGLNNYGQLGNSNTVDSTVPVRV-RDPTSPKDASKGLKATAINAGGEHSLAV----- 867

Query: 357 WVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                  N     WGW  + QLG G T +   P  V
Sbjct: 868 ---------------------GNNGYAYAWGWNLYRQLGDGTTSNSSVPVPV 898



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 158/416 (37%), Gaps = 80/416 (19%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN----LSSLSSVSMLACGGAHVLALTSPSSVIG 90
           K ++WG  T GQLG    +   +P ++     + +  +   ++ G  H LAL S      
Sbjct: 580 KAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALGS-----D 634

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYP----KPVTFFDGHR-YTITHISAGWNHSGFVSDSG 145
           G V++WG    GQLG+    ++  P     P    D ++      +SAG  HS  +  +G
Sbjct: 635 GYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDSNG 694

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-------NVHQIACGMRHSLVLLKDCL 198
            ++  G    G+LG+      S PV+V    +           Q++ G  HSL +  D  
Sbjct: 695 YVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGY 754

Query: 199 GNQVYGFGSGKRGQLGVSKD-------RIRSVSLPQ-VTIGLHDIEIVGISANGDRSAAL 250
               Y +G    GQLG S         R+R  + P     GL  ++   +SA    S A+
Sbjct: 755 ---TYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ---VSAGYSHSLAV 808

Query: 251 SAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWN---------HVLVLT 295
            ++G+ Y WG       G ++T D   P  +    S   A+ G           H L + 
Sbjct: 809 GSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAVG 868

Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD---GVKVIQIAAGAEHSAVVT 352
            +G     G + +  L D    +S+ P+ V  +  S  D   G++  + + G  HS  V 
Sbjct: 869 NNGYAYAWGWNLYRQLGDGTTSNSSVPVPV-RDPTSPADASKGLQATRFSVGDHHSLAV- 926

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                                      N     WG   +GQLG G T D   P  V
Sbjct: 927 -------------------------GSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 40/173 (23%)

Query: 247 SAALSAEGHLYTWGRGF---------NSTSDVNC---PQSLPSSLSFSQAALGWNHVLVL 294
           S A+ ++G  Y WG            NS S  N    P  +P+  ++ Q + G  H L L
Sbjct: 572 SLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLAL 631

Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSV--ALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             DG V   G + HG L +  + +S+ P+ V           G+K IQ++AG EHS    
Sbjct: 632 GSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSL--- 688

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                                   +  N  +  WGW ++G+LG  +T D   P
Sbjct: 689 -----------------------ALDSNGYVYAWGWNDNGRLGNNSTTDSSVP 718


>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
          Length = 453

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 154/368 (41%), Gaps = 49/368 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L++  S   + + ACG  H LALT       G VF
Sbjct: 101 KLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEVIVLAACGRNHTLALTET-----GSVF 155

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 156 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 213

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 214 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 273

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           L+L       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 274 LILDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGASQIYAGYTCS 327

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 328 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 387

Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
              G L   D +  SST     A ++V  LDG+   Q+A G  HS V+           I
Sbjct: 388 PTFGELGYGDHKPKSST-----AAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKI 442

Query: 364 SYTPFFPP 371
              P + P
Sbjct: 443 KRLPEYNP 450



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 158/380 (41%), Gaps = 65/380 (17%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA-GW 135
           AH L +T+      GK++SWGR   GQLGHG+      P+     DG  + +  ++A G 
Sbjct: 91  AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPR---LIDGLSHEVIVLAACGR 142

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           NH+  ++++G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++ 
Sbjct: 143 NHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIM- 200

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E 
Sbjct: 201 -DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE- 248

Query: 255 HLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                      T D    Q LP  ++     A G NH L+L     V   G   +G L  
Sbjct: 249 ----------KTKD---GQILPVPNVVVRDVACGANHTLILDSQKRVFSWGFGGYGRLGH 295

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFP 370
            E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P
Sbjct: 296 AEQKDEMVP---RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYP 352

Query: 371 PFFIN----------------VIAENRAIMTWGWG-EHGQLGLGNTCDQIHPKVVNLGDE 413
               +                ++A + + ++WG     G+LG G+      PK      E
Sbjct: 353 KAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQE 408

Query: 414 FQNRDTQLEVFCGSGFTYAI 433
            +  D         G+++++
Sbjct: 409 VKTLDGIFSEQVAMGYSHSL 428



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  +    ++ +   ACG  H+L L + 
Sbjct: 92  HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEVIVLAACGRNHTLALTET 151

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 152 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 206

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+            LG N       DG+ +        +  D E 
Sbjct: 207 YSFG----------CPE---------YGQLGHN------SDGKFI---ARAQRIEYDCEL 238

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ ++  +                 
Sbjct: 239 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLILDSQ----------------- 279

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 280 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAS-QIYAGYTCSF 328

Query: 432 AIS 434
           A+S
Sbjct: 329 AVS 331


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 128/249 (51%), Gaps = 21/249 (8%)

Query: 35  KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V S G  + GQLG  G    EL   +  L +L+ V +++CG  H LA+        G+V
Sbjct: 43  RVLSCGDNSRGQLGRRGAQRGELPEPIQALETLT-VDLVSCGKEHSLAVCH-----KGRV 96

Query: 94  FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G 
Sbjct: 97  FAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSSG 211

Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QL +S   +   S   +++G L ++ +V IS     +A L+ +G ++T+G       G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 265 STSDVNCPQ 273
            T +   PQ
Sbjct: 272 PTPEKRGPQ 280



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 136/319 (42%), Gaps = 56/319 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG    +    P  + +     V  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHS 140

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +  +++WG+  NS   +   +  PS  S            +Q A G  H   L+ 
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G +  G L+   R   V S +PLSV       L  + V+ I+ G  H+AV+T 
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGDAHTAVLT- 252

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                    ++  + T+G    GQLG   T ++  P++V   D 
Sbjct: 253 -------------------------QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 414 FQNRDTQLEVFCGSGFTYA 432
             +     ++ CGS  T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 24/331 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V S G  + GQLG  R      P+ +      +V +++CG  H LA+        G+VF
Sbjct: 43  RVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCH-----KGRVF 97

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G  
Sbjct: 98  AWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGKN 155

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G +  S +SP +V S     + Q+A G  HS  L    L    +G+GS   GQ
Sbjct: 156 SHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAGQ 212

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           L +S   +   S   ++IG L ++ ++ IS   + +A L  +G ++T+G       G++ 
Sbjct: 213 LALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSP 272

Query: 266 TSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSSTR 321
           T +   PQ +       SQ   G  H L      G+V+    G S     + PE ++   
Sbjct: 273 TPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPSDKSKPTHPEALTGNF 332

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +   L    +L  V+V  I AG   + V T
Sbjct: 333 DIR-CLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 56/319 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG         P  + +    NV  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHS 140

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +  +++WG+  NS   +   + +PS  S            +Q A G  H   L+ 
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G +  G L+   R   V S +PLS+       L  + VI I+ G EH+A    
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG-----ALKNLGVIYISCGDEHTA---- 249

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                 V+ ++  + T+G    GQLG   T ++  P++V   D 
Sbjct: 250 ----------------------VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287

Query: 414 FQNRDTQLEVFCGSGFTYA 432
             +     ++ CGS  T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301


>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
          Length = 522

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 151/366 (41%), Gaps = 45/366 (12%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S   + + ACG  H LALT       G VF
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTET-----GSVF 224

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 225 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 282

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K             V  +ACG  H+
Sbjct: 283 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 342

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 343 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGASQIYAGYTCS 396

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 397 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 456

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
              G L   +    +   S A ++V  LDG+   Q+A G  HS V+           I  
Sbjct: 457 PTFGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKK 513

Query: 366 TPFFPP 371
            P + P
Sbjct: 514 LPEYNP 519



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 158/380 (41%), Gaps = 65/380 (17%)

Query: 77  AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA-GW 135
           AH L +T+      GK++SWGR   GQLGHG+      P+     +G  + +  ++A G 
Sbjct: 160 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPR---LIEGLSHEVIVLAACGR 211

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           NH+  ++++G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++ 
Sbjct: 212 NHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIM- 269

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E 
Sbjct: 270 -DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE- 317

Query: 255 HLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                      T D    Q LP  ++     A G NH LVL     V   G   +G L  
Sbjct: 318 ----------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGH 364

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFP 370
            E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P
Sbjct: 365 AEQKDEMVP---RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYP 421

Query: 371 PFFIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDE 413
               +                ++A + + ++WG     G+LG G+      PK      E
Sbjct: 422 KAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQE 477

Query: 414 FQNRDTQLEVFCGSGFTYAI 433
            +  D         G+++++
Sbjct: 478 VKTLDGIFSEQVAMGYSHSL 497



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  +    ++ +   ACG  H+L L + 
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTET 220

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 221 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 275

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+       + Q  LG N       DG+ +        +  D E 
Sbjct: 276 YSFG----------CPE-------YGQ--LGHNS------DGKFI---ARAQRIEYDCEL 307

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V V  +A GA H+ V+  +                 
Sbjct: 308 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 348

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 349 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAS-QIYAGYTCSF 397

Query: 432 AIS 434
           A+S
Sbjct: 398 AVS 400


>gi|302793045|ref|XP_002978288.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
 gi|300154309|gb|EFJ20945.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
          Length = 454

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 125/279 (44%), Gaps = 31/279 (11%)

Query: 41  AGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGS 100
           AG+    G G     ++P L  +   + V ++A GG H LALT       G+V+SWG G 
Sbjct: 180 AGSPDSPGAGVDEAVVAP-LCCVPMPAKVILVATGGRHTLALTG-KFFHTGQVWSWGYGG 237

Query: 101 SGQLGHG-EMVDALYPKPV-----TFF--DGHRY--------TITHISAGWNHSGFVSDS 144
            GQLG G  M     P+P+     T++   G+R          I  I+ G  HS  ++D 
Sbjct: 238 EGQLGLGTRMRTVSSPQPIPLEPSTYWLRKGNRAGAVKPPGSYIVGIACGGRHSAILTDG 297

Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
           G + T G G +GQ G G      SP  VSS    +V  IA G+ H+L +       +VY 
Sbjct: 298 GAVLTFGWGLYGQCGQGSTEDELSPNYVSSLGGLHVTAIASGLWHTLCITDT---GEVYA 354

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIG--LHDIEIVGISANGDRSAALSAEGHLYTWG-- 260
           FG  + GQLGV  D   S +LP++     L D     +S     SA  + +G ++ WG  
Sbjct: 355 FGGNQFGQLGVGGD--HSETLPKLVEAAVLEDECAKSVSCGARHSAITTEKGKVFCWGWN 412

Query: 261 ----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
                G   T D + P  +P        A GW H L LT
Sbjct: 413 KYGQLGLGDTGDRDTPHEVPLEHRAVNVACGWWHTLALT 451



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 111/278 (39%), Gaps = 62/278 (22%)

Query: 183 IACGMRHSLVLLKDCL-GNQVYGFGSGKRGQLGVSKDRIRSVSLPQV------------- 228
           +A G RH+L L        QV+ +G G  GQLG+   R+R+VS PQ              
Sbjct: 210 VATGGRHTLALTGKFFHTGQVWSWGYGGEGQLGLGT-RMRTVSSPQPIPLEPSTYWLRKG 268

Query: 229 ----TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPS- 277
                +      IVGI+  G  SA L+  G + T+G G        ST D   P  + S 
Sbjct: 269 NRAGAVKPPGSYIVGIACGGRHSAILTDGGAVLTFGWGLYGQCGQGSTEDELSPNYVSSL 328

Query: 278 -SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
             L  +  A G  H L +T  GEV   GG+  G L      S T P    L + + L+  
Sbjct: 329 GGLHVTAIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHSETLP---KLVEAAVLEDE 385

Query: 337 KVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGL 396
               ++ GA HSA+ T                          E   +  WGW ++GQLGL
Sbjct: 386 CAKSVSCGARHSAITT--------------------------EKGKVFCWGWNKYGQLGL 419

Query: 397 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           G+T D+  P  V L     N      V CG   T A++
Sbjct: 420 GDTGDRDTPHEVPLEHRAVN------VACGWWHTLALT 451


>gi|198477465|ref|XP_002136602.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
 gi|198142893|gb|EDY71606.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
          Length = 243

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 12/184 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDEL---SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
           +++SWG    GQLG     D     +P  L     +S++ +ACGG H   ++  S+V   
Sbjct: 64  ELYSWGYNIYGQLGVQSPKDLPHFNAPVQLTTILGTSLATIACGGNHSFLISKSSAV--- 120

Query: 92  KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
             F WG+ + GQLG  +     YP  +         +  +  G  +S F+++ G +FTCG
Sbjct: 121 --FGWGKNTCGQLGLNDEQSRAYPSQLKTM--RTLGVRFVPCGDEYSVFLTNEGGVFTCG 176

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G +GQLGHG   +   P  V   +   + Q+ACG RH+L L++   G +VY FG G  G
Sbjct: 177 AGNYGQLGHGVSYNEMIPRMVMELMGSTITQVACGNRHTLALVRS--GGRVYSFGLGASG 234

Query: 212 QLGV 215
           QLG+
Sbjct: 235 QLGI 238



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 18/221 (8%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTIT-HISAGWNHSGFVSDSGCLF 148
           G++ S G    GQ+GH    D +   K + F    R  +   I+ G NHS  ++  G L+
Sbjct: 7   GQILSCGDNDCGQVGHFTDNDVIELSKILRFLVSKRLVVVVQIACGNNHSLALTSCGELY 66

Query: 149 TCGDGTFGQLG---HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
           + G   +GQLG     D    ++PV++++ +  ++  IACG  HS ++ K    + V+G+
Sbjct: 67  SWGYNIYGQLGVQSPKDLPHFNAPVQLTTILGTSLATIACGGNHSFLISKS---SAVFGW 123

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
           G    GQLG++ ++ R  + P     +  + +  +    + S  L+ EG ++T G G   
Sbjct: 124 GKNTCGQLGLNDEQSR--AYPSQLKTMRTLGVRFVPCGDEYSVFLTNEGGVFTCGAGNYG 181

Query: 266 T--SDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDG 298
                V+  + +P  +      + +Q A G  H L L   G
Sbjct: 182 QLGHGVSYNEMIPRMVMELMGSTITQVACGNRHTLALVRSG 222



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 107/276 (38%), Gaps = 54/276 (19%)

Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKN---VHQIACGMRHSLVLLKD 196
           +++ G + +CGD   GQ+GH          K+  F V+K    V QIACG  HSL  L  
Sbjct: 3   LTEWGQILSCGDNDCGQVGHFTDNDVIELSKILRFLVSKRLVVVVQIACGNNHSLA-LTS 61

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-----ISANGDRSAALS 251
           C   ++Y +G    GQLGV   +     LP     +    I+G     I+  G+ S  +S
Sbjct: 62  C--GELYSWGYNIYGQLGVQSPK----DLPHFNAPVQLTTILGTSLATIACGGNHSFLIS 115

Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLML 303
               ++ WG+      G N       P  L +  +L       G  + + LT +G V   
Sbjct: 116 KSSAVFGWGKNTCGQLGLNDEQSRAYPSQLKTMRTLGVRFVPCGDEYSVFLTNEGGVFTC 175

Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
           G  ++G L      +   P       V  L G  + Q+A G  H+               
Sbjct: 176 GAGNYGQLGHGVSYNEMIP-----RMVMELMGSTITQVACGNRHT--------------- 215

Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
                     + ++     + ++G G  GQLG+ NT
Sbjct: 216 ----------LALVRSGGRVYSFGLGASGQLGIRNT 241


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 128/249 (51%), Gaps = 21/249 (8%)

Query: 35  KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V S G  + GQLG  G    EL   +  L +L+ V +++CG  H LA+        G+V
Sbjct: 43  RVLSCGDNSRGQLGRRGAQRGELPEPIQALETLT-VDLVSCGKEHSLAVCH-----KGRV 96

Query: 94  FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G 
Sbjct: 97  FAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSSG 211

Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QL +S   +   S   +++G L ++ +V IS     +A L+ +G ++T+G       G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 265 STSDVNCPQ 273
            T +   PQ
Sbjct: 272 PTPEKRGPQ 280



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 136/319 (42%), Gaps = 56/319 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG    +    P  + +     V  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHS 140

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +  +++WG+  NS   +   +  PS  S            +Q A G  H   L+ 
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G +  G L+   R   V S +PLSV       L  + V+ I+ G  H+AV+T 
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGDAHTAVLT- 252

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                    ++  + T+G    GQLG   T ++  P++V   D 
Sbjct: 253 -------------------------QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 414 FQNRDTQLEVFCGSGFTYA 432
             +     ++ CGS  T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 130/296 (43%), Gaps = 30/296 (10%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G      +P  + +  L S+   A    H LAL S      G V++
Sbjct: 107 VWAWGFNGYGQLGDGSTTGRNTP--VQVEGLRSIVGAAAHYDHSLALKS-----DGTVWA 159

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WGR   GQLG G   D   P  V   D    ++  IS+G+ +S  V   G ++  G   +
Sbjct: 160 WGRNEYGQLGDGSKTDRHTPVRVKGLD----SVVAISSGFGYSLAVKSDGTVWAWGKNEY 215

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG+G     S+PV+V      +V  +A G  H+L + +D     V+ +G    GQLG 
Sbjct: 216 GQLGNGSTTQSSAPVQVQGL--HSVTAVASGDYHNLAIKRD---GTVWSWGPNLAGQLGD 270

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
             D  R    P    G      V + A    S AL ++G ++ WG       GF S++ V
Sbjct: 271 GSDMDRYT--PVQVEGFS--SAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGSSTPV 326

Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
              Q L S +     A G  H L +  DG V   G + +G L D    +   P+ V
Sbjct: 327 QV-QELDSVVDI---AAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKV 378



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 158/384 (41%), Gaps = 69/384 (17%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G      SP  + +  L SV  +A GG+H LA+ S      G V++
Sbjct: 60  VWAWGG---GQLGNGSTTG--SPAPVQVQDLHSVEAIAAGGSHNLAIKS-----DGTVWA 109

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG    GQLG G       P  V   +G R +I   +A ++HS  +   G ++  G   +
Sbjct: 110 WGFNGYGQLGDGSTTGRNTPVQV---EGLR-SIVGAAAHYDHSLALKSDGTVWAWGRNEY 165

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G      +PV+V      +V  I+ G  +SL +  D     V+ +G  + GQLG 
Sbjct: 166 GQLGDGSKTDRHTPVRVKGL--DSVVAISSGFGYSLAVKSD---GTVWAWGKNEYGQLG- 219

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWGR------GFNSTSD 268
                   S P    GLH +  V   A+GD  + A+  +G +++WG       G  S  D
Sbjct: 220 -NGSTTQSSAPVQVQGLHSVTAV---ASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMD 275

Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
              P  +    S      G+ H L L  DG V   G              S+ P+     
Sbjct: 276 RYTPVQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWG----FGSSTPV----- 326

Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
           +V  LD   V+ IAAG +HS  V                            +  +  WG 
Sbjct: 327 QVQELD--SVVDIAAGTQHSLAVR--------------------------NDGTVWAWGK 358

Query: 389 GEHGQLGLGNTCDQIHP-KVVNLG 411
            ++GQLG G +  ++ P KV   G
Sbjct: 359 NDNGQLGDGTSTARLTPIKVQGFG 382



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 17/103 (16%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG     + G G      S   + +  L SV  +A G  H LA+ +      G V++
Sbjct: 307 VWAWGNYQFNEWGFG------SSTPVQVQELDSVVDIAAGTQHSLAVRN-----DGTVWA 355

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRY------TITHIS 132
           WG+  +GQLG G     L P  V  F G  +      T+TH++
Sbjct: 356 WGKNDNGQLGDGTSTARLTPIKVQGFGGPEWPEGDVLTVTHVT 398


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 12/279 (4%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGKV 93
            ++SWG  + GQLG     +  + +   + + + ++ +  + GG+HV+AL+S      G +
Sbjct: 782  LYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSS-----DGNI 836

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            ++WG  S+GQLG     +    KP         T T +SAG  H+  V   G ++T GD 
Sbjct: 837  YTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGDN 896

Query: 154  TFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
            T G+LG     + +  P K  +       Q + G  HS+ +  D     +Y +G    G+
Sbjct: 897  THGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDD---GSIYTWGDTANGR 953

Query: 213  LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
            LG   + I     P        +     SA G  S AL ++G LYTWG    +++     
Sbjct: 954  LGRDTN-ITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGKTSAGRPNK 1012

Query: 273  QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
               P+ ++F+QA+ G ++ L L  DG +   G +  G L
Sbjct: 1013 VDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQL 1051



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 21/270 (7%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G +++WG  S GQLG  +  D     P         T  H+SAG+  S  ++  G L++ 
Sbjct: 727 GSLYTWGDNSHGQLGR-DTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSW 785

Query: 151 GDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           GD + GQLG     ++ +  P KV +       Q + G  H + L  D  GN +Y +G  
Sbjct: 786 GDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSD--GN-IYTWGDN 842

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------G 260
             GQLG +         P       D+    +SA    + A+  +G +YTW        G
Sbjct: 843 SAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELG 902

Query: 261 RGFNST-SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-SDPERVS 318
           R   ST +D       P+ ++F+QA+ G +H + ++ DG +   G + +G L  D     
Sbjct: 903 RSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTANGRLGRDTNITP 962

Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
           + +P      K     GV   Q +AG +HS
Sbjct: 963 ADKP-----GKADTPAGVTFTQASAGGKHS 987



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 136/328 (41%), Gaps = 42/328 (12%)

Query: 36   VWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +++WG  + GQLG        S P      +  +   ++ G    +AL S      G ++
Sbjct: 729  LYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALAS-----DGSLY 783

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            SWG  S GQLG     +    +P         T    SAG +H   +S  G ++T GD +
Sbjct: 784  SWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNS 843

Query: 155  FGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQLG     ++ +  P K  +  +     ++ G  H++ +  D  G+ VY +G    G+
Sbjct: 844  AGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAV--DTQGD-VYTWGDNTHGE 900

Query: 213  LGVSKDRIRSVSLPQVTIGLHD----IEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
            LG S     + S P    G  D    I     SA    S A+S +G +YTWG   N    
Sbjct: 901  LGRS-----TTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTANGRLG 955

Query: 265  -----STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                 + +D       P+ ++F+QA+ G  H + L  DG +   G        D  + S+
Sbjct: 956  RDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWG--------DSGKTSA 1007

Query: 320  TRPLSVALEKVSNLDGVKVIQIAAGAEH 347
             RP      KV    G+   Q +AGA +
Sbjct: 1008 GRP-----NKVDTPAGITFTQASAGASY 1030



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 132/310 (42%), Gaps = 45/310 (14%)

Query: 36  VWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVS-----MLACGGA-HVLALTSPSS 87
           ++SWG   DG+LG  T     + +PQ+ N   L +         AC G  H LAL S   
Sbjct: 239 LYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWHSLALGS--- 295

Query: 88  VIGGKVFSWGRGSSGQLGH--GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
              G ++SWG    G+LG   G  +  + P  V    G    IT ISAG  +S  +   G
Sbjct: 296 --DGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGIT-KITQISAGTFYSMALDSDG 352

Query: 146 CLFTCGDGTFGQLGH--GDY-------RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
            L++ GD T+ +LG   G Y       R  + P  V  F       I  G   SL    D
Sbjct: 353 DLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFT-----WIKAGEWTSLATSSD 407

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGH 255
                +Y +G  + GQLG +    R    P +VT+     +   +SA    S AL ++G+
Sbjct: 408 ---GSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLALGSDGN 464

Query: 256 LYTW--------GRGFNSTSDVNCPQSLPSS---LSFSQAALGWNHVLVLTGDGEVLMLG 304
           LY+W        GR   S      P  +P+      F++ + G++H L +  DG +   G
Sbjct: 465 LYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQFTEVSAGYSHSLAIGSDGNLYSWG 524

Query: 305 GSHHGMLSDP 314
            + +G L  P
Sbjct: 525 QNKYGELGRP 534



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACG 186
           I+    G  HS  V   G L+T GD + GQLG     +  S P K  +        ++ G
Sbjct: 710 ISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAG 769

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
              S+ L  D     +Y +G   RGQLG +       + P        I  V  SA G  
Sbjct: 770 YGFSVALASD---GSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSH 826

Query: 247 SAALSAEGHLYTW--------GRGFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTG 296
             ALS++G++YTW        GR   S +  + P     P+ ++F+  + G  H + +  
Sbjct: 827 VVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDT 886

Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            G+V   G + HG L    R +++ P      K     G+   Q +AG  HS  V+
Sbjct: 887 QGDVYTWGDNTHGELG---RSTTSTPADKP-GKADTPAGITFTQASAGESHSVAVS 938



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 146/360 (40%), Gaps = 50/360 (13%)

Query: 24  IEEEEEEQQVV----KVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAH 78
           +  +EE  Q +     ++ WG   D     G   DE  +P L+N  +    + ++ G  H
Sbjct: 173 VPAKEEGSQAIASDGNLYRWG---DNNYKLGTPEDEKRTPSLVNPPTGVHFTQVSTGYTH 229

Query: 79  VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTIT 129
            LA+ S      G ++SWG  + G+LG  E V             PK VT   G  +  T
Sbjct: 230 FLAIGS-----DGNLYSWGNNADGELGR-ETVSTTPKDNPQIDNQPKLVTPPAGVHF--T 281

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD----YRSHSSPVKVSSFVNKNVHQIAC 185
              AG  HS  +   G L++ G+  +G+LG       Y      V +   + K + QI+ 
Sbjct: 282 QACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITK-ITQISA 340

Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
           G  +S+ L  D     +Y +G     +LG        R  S  ++T+     +   I A 
Sbjct: 341 GTFYSMALDSD---GDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKAG 397

Query: 244 GDRSAALSAEGHLYTW--------GRGFNSTSDVNCPQ--SLPSSLS-FSQAALGWNHVL 292
              S A S++G LY+W        GR          P+  ++P+ ++ F++ +    H L
Sbjct: 398 EWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSL 457

Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV-KVIQIAAGAEHSAVV 351
            L  DG +   G +    L    R + +    V   KV    GV +  +++AG  HS  +
Sbjct: 458 ALGSDGNLYSWGLNDCKQLG---RDTGSAKYDVKPGKVPTPAGVAQFTEVSAGYSHSLAI 514



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 92/241 (38%), Gaps = 51/241 (21%)

Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
           +++S     ++H  A G   SL           Y +G    GQLG      +  S P   
Sbjct: 708 IRISQADGGDLHSAAVGSDGSL-----------YTWGDNSHGQLGRDT-ADKPDSHPSKA 755

Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNSTSDVNCPQSL--PSSL 279
                +  V +SA    S AL+++G LY+WG        R   S +  N P  +  P+ +
Sbjct: 756 EAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGI 815

Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
           +F QA+ G +HV+ L+ DG +   G +  G L     V+S  P     +  +  D V   
Sbjct: 816 TFVQASAGGSHVVALSSDGNIYTWGDNSAGQLG--RTVTSNNPADKPGKADTPAD-VTFT 872

Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
            ++AG  H+  V  +                            + TWG   HG+LG   T
Sbjct: 873 SVSAGQGHTVAVDTQGD--------------------------VYTWGDNTHGELGRSTT 906

Query: 400 C 400
            
Sbjct: 907 S 907



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 33/205 (16%)

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---FNSTSDVN 270
           G + +  R    P  T  +    IV     G  S A++++G+LY WG       +  D  
Sbjct: 149 GKATEYTRITLTPPTTPDIRFSHIVPAKEEG--SQAIASDGNLYRWGDNNYKLGTPEDEK 206

Query: 271 CPQSL---PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
              SL   P+ + F+Q + G+ H L +  DG +   G +  G L   E VS+T   +  +
Sbjct: 207 RTPSLVNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGR-ETVSTTPKDNPQI 265

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
           +        K++   AG   +    GK+H + L                   +  + +WG
Sbjct: 266 DNQP-----KLVTPPAGVHFTQACAGKWHSLAL-----------------GSDGNLYSWG 303

Query: 388 WGEHGQLG--LGNTCDQIHPKVVNL 410
             ++G+LG   G+    + P  VNL
Sbjct: 304 ENKYGELGRDTGSAIYDVKPGKVNL 328



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 19/139 (13%)

Query: 36   VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            +++WG   +G+LG    +     P   +  +  + +  + GG H +AL S      G ++
Sbjct: 943  IYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGS-----DGSLY 997

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            +WG       G    VD   P  +TF        T  SAG ++   +   G L++ GD  
Sbjct: 998  TWGDSGKTSAGRPNKVDT--PAGITF--------TQASAGASYCLALGSDGNLYSWGDNA 1047

Query: 155  FGQLGH--GDYRSHSSPVK 171
             GQLG   GD  S +SP K
Sbjct: 1048 KGQLGRDTGDTWS-ASPAK 1065


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 113/232 (48%), Gaps = 19/232 (8%)

Query: 36   VWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+SWGAG DGQLG          P  + +     +  +ACG +H LALT      GG VF
Sbjct: 1782 VFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTK-----GGDVF 1836

Query: 95   SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
            SWG  S GQLG G+ V   +  PV         +T I+AG  HS F++ +  ++ CG   
Sbjct: 1837 SWGLNSHGQLGLGKEVPVQH-TPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANK 1895

Query: 155  FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             GQLG    D +   +   V +    +V  I+CG  HS VL KD    +VY FG G +GQ
Sbjct: 1896 CGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKD---GKVYTFGDGSQGQ 1952

Query: 213  LG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
            LG   S + ++    P++  GL D     I+     +  L + G L+ +G G
Sbjct: 1953 LGHSTSANEVK----PKLVAGL-DGPASQIACGRHHTLVLGSSGQLWAFGSG 1999



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 146/342 (42%), Gaps = 40/342 (11%)

Query: 29   EEQQVVKVWSWGAGTDGQL------GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLAL 82
            +E + ++ W   +G D QL       +G+   + +P  ++ +    ++ + CG  H L L
Sbjct: 1667 DEDEPIRCWEDPSGGDMQLFCWGDSSSGQFGPQAAPSPVSWTVPGVITKICCGDRHTLFL 1726

Query: 83   TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
             +      G V S G  S GQLG  +  +      V        ++  ++ G +H   VS
Sbjct: 1727 NA-----DGNVLSCGHNSQGQLGRQKKKNGKIIAQVEALG----SVVAMACGQDHCLAVS 1777

Query: 143  DSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
             SG +F+ G G  GQLG     S S  P KV   +   + Q+ACG  HSL L K   G  
Sbjct: 1778 ASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTK---GGD 1834

Query: 202  VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
            V+ +G    GQLG+ K+ +     P +   L  + +  I+A G  S  L+    +Y  G 
Sbjct: 1835 VFSWGLNSHGQLGLGKE-VPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGA 1893

Query: 262  ------GFNSTSD------VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
                  G N   +         P   P S+SF   + G +H  VLT DG+V   G    G
Sbjct: 1894 NKCGQLGVNRVDEKGRFNICMVPALRPLSVSF--ISCGESHSAVLTKDGKVYTFGDGSQG 1951

Query: 310  MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             L      +  +P     + V+ LDG    QIA G  H+ V+
Sbjct: 1952 QLGHSTSANEVKP-----KLVAGLDG-PASQIACGRHHTLVL 1987



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 30/190 (15%)

Query: 36   VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+SWG  + GQLG G+ +  + +P ++   +  +V+ +A GG H L LT     +   V+
Sbjct: 1835 VFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLT-----LADLVY 1889

Query: 95   SWGRGSSGQLGHGE----------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
              G    GQLG             MV AL P  V+F          IS G +HS  ++  
Sbjct: 1890 CCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSF----------ISCGESHSAVLTKD 1939

Query: 145  GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
            G ++T GDG+ GQLGH    +   P K+ + ++    QIACG  H+LVL       Q++ 
Sbjct: 1940 GKVYTFGDGSQGQLGHSTSANEVKP-KLVAGLDGPASQIACGRHHTLVLGS---SGQLWA 1995

Query: 205  FGSGKRGQLG 214
            FGSG +GQ G
Sbjct: 1996 FGSGAKGQTG 2005



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 129/299 (43%), Gaps = 53/299 (17%)

Query: 147  LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
            LF  GD + GQ G       ++P  VS  V   + +I CG RH+L L  D  GN V   G
Sbjct: 1685 LFCWGDSSSGQFG-----PQAAPSPVSWTVPGVITKICCGDRHTLFLNAD--GN-VLSCG 1736

Query: 207  SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-- 264
               +GQLG  K +   +      +G     +V ++   D   A+SA GH+++WG G +  
Sbjct: 1737 HNSQGQLGRQKKKNGKIIAQVEALG----SVVAMACGQDHCLAVSASGHVFSWGAGEDGQ 1792

Query: 265  -------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
                   S+S       +P  +   Q A G +H L LT  G+V   G + HG L   + V
Sbjct: 1793 LGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEV 1852

Query: 318  SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT-------------GKFHWVRL---- 360
                P+      +  L GV V QIAAG  HS  +T             G+    R+    
Sbjct: 1853 ----PVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEKG 1908

Query: 361  -FIISYTPFFPPF---FIN-------VIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
             F I   P   P    FI+       V+ ++  + T+G G  GQLG   + +++ PK+V
Sbjct: 1909 RFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLV 1967



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 10/139 (7%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKV 93
            V+  GA   GQLG  R+ ++    +  + +L   SVS ++CG +H   LT       GKV
Sbjct: 1888 VYCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTK-----DGKV 1942

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
            +++G GS GQLGH    + + PK V   DG     + I+ G +H+  +  SG L+  G G
Sbjct: 1943 YTFGDGSQGQLGHSTSANEVKPKLVAGLDG---PASQIACGRHHTLVLGSSGQLWAFGSG 1999

Query: 154  TFGQLGHGDYRSHSSPVKV 172
              GQ G+G   S  +P  V
Sbjct: 2000 AKGQTGNGHNDSCLTPTLV 2018



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 13/108 (12%)

Query: 35   KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGKV 93
            KV+++G G+ GQLG     +E+ P+L+  + L    S +ACG  H L L S      G++
Sbjct: 1941 KVYTFGDGSQGQLGHSTSANEVKPKLV--AGLDGPASQIACGRHHTLVLGS-----SGQL 1993

Query: 94   FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT-----HISAGWN 136
            +++G G+ GQ G+G     L P  V F      T        I+AGWN
Sbjct: 1994 WAFGSGAKGQTGNGHNDSCLTPTLVQFPWTTDDTAAMPSDLKIAAGWN 2041


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 39/340 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  + G+LG G   D   P+L+ +L++ SSV  +ACG  H  A+T     + G++
Sbjct: 306 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 360

Query: 94  FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+   G LGHG  +    PK +    +G    +  +S G  H+  ++  G LFT 
Sbjct: 361 YTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEG--LHVASVSCGPWHTALITSYGRLFTF 418

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDGTFG LGHGD  +   P +V S        ++CG+ H+  +++  +           +
Sbjct: 419 GDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 478

Query: 202 VYGFGSGKRGQLGV-SKD-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
           ++ +G G + +LG   KD R++   +P     L D     I+     +  L+  G ++T 
Sbjct: 479 LFTWGDGDKNRLGHGDKDPRLKPTCVP----ALIDYNFHKIACGHSLTVGLTTSGQVFTM 534

Query: 259 ----WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
               +G+  N  +D   P  +   L+     + + G  HV  LT   EV   G   +G L
Sbjct: 535 GSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRL 594

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +      P  V       L    V  IA G+ ++A +
Sbjct: 595 GHGDLEDRKVPTIVEA-----LKDRHVKYIACGSNYTAAI 629



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 175/406 (43%), Gaps = 69/406 (16%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACG  H   +T       G++F+WG  S G+LGHG   D  
Sbjct: 273 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQ-----GEIFTWGEESGGRLGHGIGKDVF 327

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +P+ V        ++  ++ G  H+  V+ +G L+T GDGT   G LGHG   SH  P +
Sbjct: 328 HPRLVESLTATS-SVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKR 386

Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           ++ S    +V  ++CG  H+ ++       +++ FG G  G LG       +V  P+   
Sbjct: 387 IAGSLEGLHVASVSCGPWHTALITS---YGRLFTFGDGTFGVLGHGDK--ETVQYPREVE 441

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST-----SDVNC-P 272
            L  +  + +S     +AA+             + G L+TWG G  +       D    P
Sbjct: 442 SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 501

Query: 273 QSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             +P+ + ++   +   H L   LT  G+V  +G + +G L + +      P  V  +  
Sbjct: 502 TCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ-TDGKLPCLVEDKLA 560

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
           S      V +I+ GA H A +T +                            + TWG G 
Sbjct: 561 SEF----VEEISCGAYHVAALTSR--------------------------NEVYTWGKGA 590

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V   +  ++R  +  + CGS +T AI  H
Sbjct: 591 NGRLGHGDLEDRKVPTIV---EALKDRHVKY-IACGSNYTAAICLH 632


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 156/376 (41%), Gaps = 59/376 (15%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            W+WG    GQLG     +  +P  +    L+ V  LA G AH L L +      G   S
Sbjct: 658 AWAWGGNDQGQLGDATTLERSTPAAV--PGLAHVVALAAGNAHSLVLHAD-----GTSSS 710

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G     L+P PV         +  ++AG +HS  V   G ++  G+   
Sbjct: 711 WGNNAYGQLGDG--TSTLHPVPVQVPG--PSAMKGVAAGGSHSLAVRSDGTVWAWGNNGS 766

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           G+LG G       PV+V      +   ++ G  HSL +  D     V+ +G   +GQLG 
Sbjct: 767 GELGDGTGLQRPRPVQVQGL--GSAVAVSAGTNHSLAVQSD---GTVWAWGGNSQGQLGD 821

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVN 270
                R V  P    GL+ +  + +SA    S AL ++G ++ WG  F     ++TS   
Sbjct: 822 GTGITRYV--PVRVSGLNGV--MAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQR 877

Query: 271 -CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
             P  +P        A G +H L +  DG V   G + +G L D  ++  + P+     +
Sbjct: 878 LVPIQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPV-----Q 932

Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
           V  L G+  + +AAG  HS  V                            N  +  WG+ 
Sbjct: 933 VPGLAGM--VSVAAGTYHSLAVH--------------------------SNGTVWAWGYN 964

Query: 390 EHGQLGLGNTCDQIHP 405
            HGQLG G T  ++ P
Sbjct: 965 NHGQLGDGTTTQRLLP 980



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 169/405 (41%), Gaps = 65/405 (16%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG    GQ+G G +  +L+P  + +  +  +  +A GGAH LA+ +      G  ++WG
Sbjct: 310 AWGNNDHGQVGNGTISQQLTP--VQVPGVGRMKSIAAGGAHSLAMRAD-----GITWAWG 362

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             S GQLG G+    L P  V    G R  +  +  G  HS  +   G ++  G  T GQ
Sbjct: 363 DDSQGQLGDGQSSQQLRPARVL---GQRIRMP-LGTGNRHSLALHADGTVWAWGVNTAGQ 418

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--V 215
           LG G     + PV+V       VH ++    HSL    D     V+ +G    GQLG   
Sbjct: 419 LGDGTDLPRTLPVQVPGL--AGVHTLSATTSHSLAARAD---GTVWAWGDNAFGQLGDGT 473

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----- 270
           +  R+  V +P    GL  ++ V  S+    S A+S +G ++ WG  FN +  +      
Sbjct: 474 TTQRLLPVQVP----GLAGVDTV--SSMHQHSLAVSRDGTVWAWG--FNGSGRLGDGTTL 525

Query: 271 ---CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
               P  +P   S    A G  H L L  DG V   G + +G L D   +    P+    
Sbjct: 526 SRLTPVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPV---- 581

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFH-WVRLF-----------IISYTPFFPPFFIN 375
            +V  L GV  + +AAG  +S  V  +   W   +               TP   P    
Sbjct: 582 -QVPGLSGV--VALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTPTQAPALSG 638

Query: 376 VIA----ENRAI------MTWGWG--EHGQLGLGNTCDQIHPKVV 408
           V+A    ++ ++      + W WG  + GQLG   T ++  P  V
Sbjct: 639 VVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAV 683



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 154/378 (40%), Gaps = 68/378 (17%)

Query: 38   SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
            SWG    GQLG G     L P  + +   S++  +A GG+H LA+ S      G V++WG
Sbjct: 710  SWGNNAYGQLGDGT--STLHPVPVQVPGPSAMKGVAAGGSHSLAVRSD-----GTVWAWG 762

Query: 98   RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
               SG+LG G  +    P+PV        +   +SAG NHS  V   G ++  G  + GQ
Sbjct: 763  NNGSGELGDGTGLQ--RPRPVQVQG--LGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQ 818

Query: 158  LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--V 215
            LG G   +   PV+VS      V  ++ G  HSL L  D     V+ +G    GQLG   
Sbjct: 819  LGDGTGITRYVPVRVSGL--NGVMAVSAGSAHSLALRSD---GTVWAWGYNFYGQLGDAT 873

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDV 269
            S  R+  + +P +T       +V I+A    S A+ ++G ++ WG  F       +    
Sbjct: 874  STQRLVPIQVPGLT------GVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQR 927

Query: 270  NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
            + P  +P        A G  H L +  +G V   G ++HG L D        P+ +    
Sbjct: 928  SPPVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPI---- 983

Query: 330  VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
                           +  S V+    +W  L + +                     WGWG
Sbjct: 984  ---------------SSSSGVIAAAANWHSLVVRTDG-----------------TVWGWG 1011

Query: 390  EHG--QLGLGNTCDQIHP 405
             +   QLG G+T D+  P
Sbjct: 1012 SNNASQLGDGSTSDRKMP 1029



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 175/423 (41%), Gaps = 75/423 (17%)

Query: 48  GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
           G  R+   L+P  L          +A G AH L L S      G V++WG  + GQLG G
Sbjct: 24  GPSRIEAALTPPPLGHE------QVAAGAAHSLMLRSD-----GTVWAWGDNTYGQLGDG 72

Query: 108 EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167
             +    P  V   D    ++  ++ G+ HS  +   G ++  GD  FGQLG G      
Sbjct: 73  TGITQRLPVRVQSLD----SVVALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQ 128

Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227
            P++V S     V  IA G  HSL LL D     V+ +G    GQLG   D   +  LP 
Sbjct: 129 VPIQVWSL--NGVVAIAAGDHHSLALLSD---GSVWAWGYNAHGQLG--DDTTVASPLPV 181

Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSF 281
              GL    +V +SA    S A+ ++G +  WG  +       S+++   P  + S    
Sbjct: 182 QVQGLSG--VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGV 239

Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST--RPLSVALEKVSNLDGVKVI 339
                G  H L L  DG V   G +  G L     +SST  RP+ V +  ++N     V 
Sbjct: 240 KSVVAGTFHSLALCSDGTVRAWGENGSGQLG----ISSTTRRPVPVVVPGLTN-----VQ 290

Query: 340 QIAAGAEHSAVVTGKFHWVRLF-----------IIS--YTPFFPPFF--INVIAENRA-- 382
            +AAG+ HS  +      VR +            IS   TP   P    +  IA   A  
Sbjct: 291 ALAAGSAHSLALRSDGT-VRAWGNNDHGQVGNGTISQQLTPVQVPGVGRMKSIAAGGAHS 349

Query: 383 ------IMTWGWGE--HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
                  +TW WG+   GQLG G +  Q+ P  V LG        ++ +  G+G  ++++
Sbjct: 350 LAMRADGITWAWGDDSQGQLGDGQSSQQLRPARV-LGQ-------RIRMPLGTGNRHSLA 401

Query: 435 RHC 437
            H 
Sbjct: 402 LHA 404



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 139/324 (42%), Gaps = 37/324 (11%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG  T GQLG G       P  + +  L+ V  L+   +H LA  +      G V++
Sbjct: 408 VWAWGVNTAGQLGDGTDLPRTLP--VQVPGLAGVHTLSATTSHSLAARAD-----GTVWA 460

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG G     L P  V    G    +  +S+   HS  VS  G ++  G    
Sbjct: 461 WGDNAFGQLGDGTTTQRLLPVQVPGLAG----VDTVSSMHQHSLAVSRDGTVWAWGFNGS 516

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
           G+LG G   S  +PV+V      ++  +A G  HSL L  D     V+ +G    G LG 
Sbjct: 517 GRLGDGTTLSRLTPVQVPGL--SSMVAVAAGSTHSLALRAD---GTVWAWGDNSNGALGD 571

Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
             +  R+  V +P ++       +V ++A    S A+ A+G ++ WG       G  +T+
Sbjct: 572 GTTLRRLSPVQVPGLS------GVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTT 625

Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
               P   P+       A G +H L L  DG     GG+  G L D   +  + P +V  
Sbjct: 626 PRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAVPG 685

Query: 328 EKVSNLDGVKVIQIAAGAEHSAVV 351
                     V+ +AAG  HS V+
Sbjct: 686 LA-------HVVALAAGNAHSLVL 702



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 127/287 (44%), Gaps = 33/287 (11%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG  + GQLG G       P  + +S L+ V  ++ G AH LAL S      G V++
Sbjct: 808  VWAWGGNSQGQLGDGTGITRYVP--VRVSGLNGVMAVSAGSAHSLALRSD-----GTVWA 860

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG    GQLG       L P  V    G    +  I+AG +HS  V   G ++  G   +
Sbjct: 861  WGYNFYGQLGDATSTQRLVPIQVPGLTG----VVSIAAGTHHSLAVRSDGTVWAWGYNFY 916

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG G     S PV+V       +  +A G  HSL +  +     V+ +G    GQLG 
Sbjct: 917  GQLGDGTKIQRSPPVQVPGL--AGMVSVAAGTYHSLAVHSN---GTVWAWGYNNHGQLGD 971

Query: 216  SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD- 268
                 R + +P  +       ++  +AN   S  +  +G ++ WG       G  STSD 
Sbjct: 972  GTTTQRLLPVPISS----SSGVIAAAANW-HSLVVRTDGTVWGWGSNNASQLGDGSTSDR 1026

Query: 269  -VNCPQSLPSSL-SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
             +  P S+P+ + S S  A   NH L L  DG V   G  + G L D
Sbjct: 1027 KMPTPSSVPNGVRSISSGA---NHSLALRSDGTVWAWGFGNSGQLGD 1070



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 165/443 (37%), Gaps = 93/443 (20%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           VW+WG    GQLG G   D  S   + + SL+ V  +A G  H LAL S      G V++
Sbjct: 108 VWAWGDNFFGQLGDGS--DAQSQVPIQVWSLNGVVAIAAGDHHSLALLSD-----GSVWA 160

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG  + GQLG    V +  P  V    G    +  +SAG  HS  V   G +   GD  +
Sbjct: 161 WGYNAHGQLGDDTTVASPLPVQVQGLSG----VVALSAGSTHSLAVLSDGKVKAWGDNYY 216

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G      +PV VSS     V  +  G  HSL L  D     V  +G    GQLG+
Sbjct: 217 GQLGDGSSTERWTPVLVSSLTG--VKSVVAGTFHSLALCSD---GTVRAWGENGSGQLGI 271

Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
           S    R V  P V  GL +++   ++A    S AL ++G +  WG       G  + S  
Sbjct: 272 SSTTRRPV--PVVVPGLTNVQA--LAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQ 327

Query: 270 NCPQSLPS-------------SLSFSQAALGW---------------------------- 288
             P  +P              SL+     + W                            
Sbjct: 328 LTPVQVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQR 387

Query: 289 ---------NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKV 338
                     H L L  DG V   G +  G L D   +  T P+ V  L  V  L     
Sbjct: 388 IRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLPVQVPGLAGVHTLSATTS 447

Query: 339 IQIAAGAEHSAVVTGKFHWVRLFIISYT----PFFPPFFINV------------IAENRA 382
             +AA A+ +    G   + +L   + T    P   P    V            ++ +  
Sbjct: 448 HSLAARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMHQHSLAVSRDGT 507

Query: 383 IMTWGWGEHGQLGLGNTCDQIHP 405
           +  WG+   G+LG G T  ++ P
Sbjct: 508 VWAWGFNGSGRLGDGTTLSRLTP 530



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 156/398 (39%), Gaps = 57/398 (14%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG    GQLG         P ++    L++V  LA G AH LAL S      G V +WG
Sbjct: 260 AWGENGSGQLGISSTTRRPVPVVV--PGLTNVQALAAGSAHSLALRSD-----GTVRAWG 312

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
               GQ+G+G +   L P  V         +  I+AG  HS  +   G  +  GD + GQ
Sbjct: 313 NNDHGQVGNGTISQQLTPVQVPGVG----RMKSIAAGGAHSLAMRADGITWAWGDDSQGQ 368

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG G       P +V     +    +  G RHSL L  D     V+ +G    GQLG   
Sbjct: 369 LGDGQSSQQLRPARV--LGQRIRMPLGTGNRHSLALHAD---GTVWAWGVNTAGQLGDGT 423

Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
           D  R  +LP    GL  +    +SA    S A  A+G ++ WG       G  +T+    
Sbjct: 424 DLPR--TLPVQVPGLAGVHT--LSATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQRLL 479

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
           P  +P        +    H L ++ DG V   G +  G L D   +S   P+     +V 
Sbjct: 480 PVQVPGLAGVDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPV-----QVP 534

Query: 332 NLDGVKVIQIAAGAEHSAVVTGK---FHWVR---------LFIISYTPFFPPFFINVIA- 378
            L    ++ +AAG+ HS  +      + W             +   +P   P    V+A 
Sbjct: 535 GLS--SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLSGVVAL 592

Query: 379 -----------ENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                         ++  WG+   GQLG G T  ++ P
Sbjct: 593 AAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTP 630



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 155/381 (40%), Gaps = 62/381 (16%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG    G+LG G       P+ + +  L S   ++ G  H LA+ S      G V++
Sbjct: 758  VWAWGNNGSGELGDGTGLQR--PRPVQVQGLGSAVAVSAGTNHSLAVQSD-----GTVWA 810

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  S GQLG G  +    P  V+  +G    +  +SAG  HS  +   G ++  G   +
Sbjct: 811  WGGNSQGQLGDGTGITRYVPVRVSGLNG----VMAVSAGSAHSLALRSDGTVWAWGYNFY 866

Query: 156  GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
            GQLG         P++V       V  IA G  HSL +  D     V+ +G    GQLG 
Sbjct: 867  GQLGDATSTQRLVPIQVPGLT--GVVSIAAGTHHSLAVRSD---GTVWAWGYNFYGQLGD 921

Query: 216  SKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
                 RS   P V + GL    +V ++A    S A+ + G ++ WG       G  +T+ 
Sbjct: 922  GTKIQRS---PPVQVPGL--AGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQ 976

Query: 269  VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
               P  + SS     AA  W H LV+  DG V   G ++   L D        P   ++ 
Sbjct: 977  RLLPVPISSSSGVIAAAANW-HSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPTPSSVP 1035

Query: 329  KVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGW 388
                 +GV+   I++GA HS                            +  +  +  WG+
Sbjct: 1036 -----NGVR--SISSGANHSL--------------------------ALRSDGTVWAWGF 1062

Query: 389  GEHGQLGLGNTCDQIHPKVVN 409
            G  GQLG G    ++ P  V+
Sbjct: 1063 GNSGQLGDGVMSMRLVPAGVS 1083



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 36   VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
            VW+WG    GQLG G     L P  + +SS S V + A    H L + +      G V+ 
Sbjct: 958  VWAWGYNNHGQLGDGTTTQRLLP--VPISSSSGV-IAAAANWHSLVVRTD-----GTVWG 1009

Query: 96   WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
            WG  ++ QLG G   D   P P +  +G R     IS+G NHS  +   G ++  G G  
Sbjct: 1010 WGSNNASQLGDGSTSDRKMPTPSSVPNGVR----SISSGANHSLALRSDGTVWAWGFGNS 1065

Query: 156  GQLGHGDYRSHSSPVKVSSF 175
            GQLG G       P  VS F
Sbjct: 1066 GQLGDGVMSMRLVPAGVSGF 1085


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 14/240 (5%)

Query: 26  EEEEEQQVV---KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLAL 82
           EE+    V    +V++WG+G  GQLG G   + + P+L+     + +  +ACG AH + +
Sbjct: 43  EEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVV 102

Query: 83  TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
           +       G VF+WG G  GQLG G   ++  P  VT  DG +  +  ++ G  H+  V+
Sbjct: 103 SKA-----GLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVK--VCKVACGSAHTAVVT 155

Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           +SG ++T G G  GQLGHGD  S S P+ V       V  +ACG+ H++V+ +  +   V
Sbjct: 156 ESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSE--VDRAV 213

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G  + GQLG     I   +  +    + D++   I+     + ALS+ G +Y +G G
Sbjct: 214 FSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDLQQ--IACGSSYTLALSSRGDVYAFGWG 271



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 132/288 (45%), Gaps = 27/288 (9%)

Query: 38  SWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGA----HVLALTSPSSVIGGK 92
           SWG   DG LG G      SP  ++ L  L  VS+ ACGG     H  A+T       G+
Sbjct: 2   SWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSV-ACGGGSEEQHSAAVTEQ-----GQ 55

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V++WG G SGQLGHG+  + + P+ +     +   I  ++ G  H+  VS +G +F  G 
Sbjct: 56  VYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSN--PIVEVACGSAHTVVVSKAGLVFAWGW 113

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           G FGQLG G   + + PV+V+S     V ++ACG  H+ V+ +      VY +G G  GQ
Sbjct: 114 GHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTES---GHVYTWGWGVNGQ 170

Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTW--------GRGF 263
           LG   D   S S P     LH I +  ++     +  +S  +  +++W        G G 
Sbjct: 171 LGHGDD--ASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGG 228

Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                 N  +S        Q A G ++ L L+  G+V   G    G L
Sbjct: 229 WDIFGGNKNRSPRPIKDLQQIACGSSYTLALSSRGDVYAFGWGKDGQL 276



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 95/182 (52%), Gaps = 15/182 (8%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGKV 93
           V++WG G  GQLG G  H+   P  + ++SL  V +  +ACG AH   +T       G V
Sbjct: 108 VFAWGWGHFGQLGVGSTHNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTES-----GHV 160

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD-SGCLFTCGD 152
           ++WG G +GQLGHG+  DA   +P+     H   ++ ++ G  H+  VS+    +F+ G 
Sbjct: 161 YTWGWGVNGQLGHGD--DASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGW 218

Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
             +GQLGHG +         S    K++ QIACG  ++L L        VY FG GK GQ
Sbjct: 219 DEYGQLGHGGWDIFGGNKNRSPRPIKDLQQIACGSSYTLALSSR---GDVYAFGWGKDGQ 275

Query: 213 LG 214
           LG
Sbjct: 276 LG 277



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 134/348 (38%), Gaps = 95/348 (27%)

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG--WNHSGFVSDSGCLFTCG 151
           FSWG  + G LG G       P P+    G          G    HS  V++ G ++T G
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            G  GQLGHGD ++   P  +    +  + ++ACG  H++V+ K  L   V+ +G G  G
Sbjct: 61  SGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGL---VFAWGWGHFG 117

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
           QLGV      + + P     L  +++  ++     +A ++  GH+YTWG G N       
Sbjct: 118 QLGVGS--THNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVN------- 168

Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
                                                G L   +  S +RP+      V 
Sbjct: 169 -------------------------------------GQLGHGDDASQSRPM-----YVK 186

Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
            L G+ V  +A G  H+ VV+                           +RA+ +WGW E+
Sbjct: 187 KLHGIYVSTLACGLAHTVVVS-------------------------EVDRAVFSWGWDEY 221

Query: 392 GQLGLG-----NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
           GQLG G            P+ +        +D Q ++ CGS +T A+S
Sbjct: 222 GQLGHGGWDIFGGNKNRSPRPI--------KDLQ-QIACGSSYTLALS 260


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 128/249 (51%), Gaps = 21/249 (8%)

Query: 35  KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V S G  + GQLG  G    EL   +  L +L+ V +++CG  H LA+        G+V
Sbjct: 43  RVLSCGDNSRGQLGRRGAQRGELPEPIQALETLT-VDLVSCGKEHSLAVCH-----KGRV 96

Query: 94  FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G 
Sbjct: 97  FAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154

Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSSG 211

Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
           QL +S   +   S   +++G L ++ +V IS     +A L+ +G ++T+G       G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 265 STSDVNCPQ 273
            T +   PQ
Sbjct: 272 PTPEKRGPQ 280



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 136/319 (42%), Gaps = 56/319 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG    +    P  + +     V  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHS 140

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +  +++WG+  NS   +   +  PS  S            +Q A G  H   L+ 
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G +  G L+   R   V S +PLSV       L  + V+ I+ G  H+AV+T 
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGDAHTAVLT- 252

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                    ++  + T+G    GQLG   T ++  P++V   D 
Sbjct: 253 -------------------------QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287

Query: 414 FQNRDTQLEVFCGSGFTYA 432
             +     ++ CGS  T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 142/339 (41%), Gaps = 34/339 (10%)

Query: 36  VWSWGAGTDGQLGTGR-LHDELSP--QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
           VW+ G  + GQLG G        P      L+    ++ + CG  H  ALTS   V+G  
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLG-- 67

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
              +G G  GQLG G       P+ V    G    +  ++AG  HS  +++SG L+  GD
Sbjct: 68  ---FGNGVKGQLGIGNTDSHSNPQRVHLLSGK--GVVKMAAGLEHSLALTESGDLYAFGD 122

Query: 153 GTFGQ--LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
              GQ  LGH       +P KV       + Q+ACG  H+ VL       +++ FG+ + 
Sbjct: 123 NLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSS---GELFMFGNNRD 179

Query: 211 GQLGVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
           G LGV+           S PQ+  GL    +V I      + AL+A G +Y WG      
Sbjct: 180 GALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQ 239

Query: 262 -GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
            G   T +   P  +   LS  +    A G  H + +T   +V   G   HG L    R 
Sbjct: 240 LGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRR- 298

Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV--VTGK 354
               P+     ++  L G +V     GA H+ +  VTG+
Sbjct: 299 GVIVPVPT---RIVRLGGRRVKNCVGGAWHTIIGTVTGE 334



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 117/272 (43%), Gaps = 45/272 (16%)

Query: 151 GDGTFGQLGHGD-YRSHSSPVKVSSFV--NKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
           G  + GQLG+G   +S   P +V+  +   + + ++ CG  H+  L  D     V GFG+
Sbjct: 14  GGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSD---GDVLGFGN 70

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
           G +GQLG+      S S PQ    L    +V ++A  + S AL+  G LY +G       
Sbjct: 71  GVKGQLGIGN--TDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQL 128

Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
             G N T+    PQ +P       +Q A G +H  VLT  GE+ M G +  G L      
Sbjct: 129 GLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHA 188

Query: 318 SSTRPL-SVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
           +   P+ + A + V+ L G  V+QI  G +H+  +T                        
Sbjct: 189 NEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAG--------------------- 227

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                 +  WG    GQLG G+T ++  P +V
Sbjct: 228 -----GVYCWGENGRGQLGTGDTQNRYTPSLV 254


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 115/228 (50%), Gaps = 19/228 (8%)

Query: 38  SWGAGTDGQLG----TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           SWG G  GQLG     G  +  L P+ L  S       +ACG +H LALT       G V
Sbjct: 3   SWGCGEFGQLGLKDAAGVFNSPL-PRFLRGSRELLFVRVACGSSHTLALTGS-----GDV 56

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +S+G+G+ G LGHG       P  V    G    I  I+ G NHS  ++  G LF+ G G
Sbjct: 57  YSFGQGTFGALGHGTTESCSSPVIVDSLWG--LGIVQIACGDNHSCALTVEGQLFSWGRG 114

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
            +GQLG G   +H  PV V++  ++ + Q+ CG  +++ +  D    Q++ +G G  GQ 
Sbjct: 115 KYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSD---GQLFSWGHGHWGQT 171

Query: 214 G-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           G  ++D I    +P++   L +  IV  SA    + AL++ G +Y WG
Sbjct: 172 GHGTQDNIL---VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWG 216



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 10/179 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V+S+G GT G LG G      SP +++      +  +ACG  H  ALT     + G++F
Sbjct: 55  DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT-----VEGQLF 109

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           SWGRG  GQLG G + + L P PVT        +T +  G +++  +   G LF+ G G 
Sbjct: 110 SWGRGKYGQLGCGSVENHLQPVPVTALS--DRLLTQVVCGADYTMAIDSDGQLFSWGHGH 167

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
           +GQ GHG   +   P  V S  N N+ Q + G RH++ L     G  VY +G  ++GQ+
Sbjct: 168 WGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVALTS---GGGVYAWGDNEQGQV 223



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 14/228 (6%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI-THISAGWNHSGFVSDSGCLFTCG 151
           + SWG G  GQLG  +           F  G R  +   ++ G +H+  ++ SG +++ G
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
            GTFG LGHG   S SSPV V S     + QIACG  HS  L  +    Q++ +G GK G
Sbjct: 61  QGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVE---GQLFSWGRGKYG 117

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NST 266
           QLG     + +   P     L D  +  +    D + A+ ++G L++WG G      + T
Sbjct: 118 QLGCGS--VENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGT 175

Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            D      L  SL   +  QA+ G  H + LT  G V   G +  G +
Sbjct: 176 QDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 28/227 (12%)

Query: 147 LFTCGDGTFGQLGHGDYRS-HSSPVKVSSFVNKNVH----QIACGMRHSLVLLKDCLGNQ 201
           L + G G FGQLG  D     +SP+    F+  +      ++ACG  H+L L        
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLP--RFLRGSRELLFVRVACGSSHTLALTGS---GD 55

Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
           VY FG G  G LG       S S P +   L  + IV I+   + S AL+ EG L++WGR
Sbjct: 56  VYSFGQGTFGALG--HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGR 113

Query: 262 G----FNSTSDVNCPQSLP-SSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
           G        S  N  Q +P ++LS    +Q   G ++ + +  DG++   G  H G    
Sbjct: 114 GKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGH 173

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHW 357
             + +   P     + V +L+   ++Q +AGA H+  +T   G + W
Sbjct: 174 GTQDNILVP-----KLVCSLENDNIVQASAGARHAVALTSGGGVYAW 215



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 37/156 (23%)

Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
           L F + A G +H L LTG G+V   G    G L      S + P+      V +L G+ +
Sbjct: 35  LLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPV-----IVDSLWGLGI 89

Query: 339 IQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
           +QIA G  HS  +T                          E + + +WG G++GQLG G+
Sbjct: 90  VQIACGDNHSCALT-------------------------VEGQ-LFSWGRGKYGQLGCGS 123

Query: 399 TCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
             + + P  V  L D         +V CG+ +T AI
Sbjct: 124 VENHLQPVPVTALSDRLLT-----QVVCGADYTMAI 154


>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 310

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 149/343 (43%), Gaps = 66/343 (19%)

Query: 88  VIGGKVFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
           V    + +WG G  GQLG G         +V+AL P          Y++  + +G  +S 
Sbjct: 2   VTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEP----------YSVRSVVSGSRNSL 51

Query: 140 FVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
            + D G +FT G    G LGH  + ++ + P +V +  N  + Q A G  H L +  D  
Sbjct: 52  AICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAV--DDQ 109

Query: 199 GNQVYGFGSGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
           G + Y +G  + GQ G    KD +     R + +P+       + +  ++A G  S  L+
Sbjct: 110 G-RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVAAGGTHSVVLT 166

Query: 252 AEGHLYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            EGH++TWG+ +       ++ P  +    +    A+G  H L L  DG +L  G + +G
Sbjct: 167 REGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYG 226

Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
            L   +   ++ P+ V       LD + ++ IAAG  HS  +T K               
Sbjct: 227 QLGTGDTQPTSHPVPV-----QGLDDLTLVDIAAGGWHSTALTDKGE------------- 268

Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNL 410
                        +  WG GEHG+LGLG+     ++ P+ VNL
Sbjct: 269 -------------VYGWGRGEHGRLGLGDNDKSSKMVPQKVNL 298



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 24/232 (10%)

Query: 38  SWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
           +WG    G LG       E  P  +   +   ++  A GG H LA+        G+ ++W
Sbjct: 61  TWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ-----GRAYAW 115

Query: 97  GRGSSGQLGHGEMVDALYPKPVTF------FDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           G    GQ G   + D +  +PV            + T+  ++AG  HS  ++  G ++T 
Sbjct: 116 GGNEYGQCGEEPLKDEMG-RPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTW 174

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
           G         GD +  S PV+V     +NV  IA G  H+L L +D    ++  +G+ + 
Sbjct: 175 GQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALEED---GRLLAWGNNEY 225

Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           GQLG    +  S  +P    GL D+ +V I+A G  S AL+ +G +Y WGRG
Sbjct: 226 GQLGTGDTQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRG 275



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 132/322 (40%), Gaps = 40/322 (12%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG+G DGQLG G   ++    ++      SV  +  G  + LA+        G +F+WG
Sbjct: 9   AWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICD-----DGTMFTWG 63

Query: 98  RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
               G LGH  E      P  V      + T   I  GW H   V D G  +  G   +G
Sbjct: 64  WNQRGTLGHQPETKTENIPSRVKALANVKITQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121

Query: 157 QLGHGDYRSH-SSPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
           Q G    +     PV+    + K       V Q+A G  HS+VL ++     V+ +    
Sbjct: 122 QCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE---GHVWTW---- 174

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
            GQ     D I+ +S+P    GL ++ ++ + A    + AL  +G L  WG       G 
Sbjct: 175 -GQPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALEEDGRLLAWGNNEYGQLGT 230

Query: 264 NSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVS 318
             T   + P   Q L        AA GW H   LT  GEV   G   HG   L D ++ S
Sbjct: 231 GDTQPTSHPVPVQGLDDLTLVDIAAGGW-HSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289

Query: 319 STRPLSVALEKVSNLDGVKVIQ 340
              P  V L  ++  D ++V++
Sbjct: 290 KMVPQKVNL--LAEEDIIQVLK 309



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 23/213 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-------LSSLSSVSMLACGGAHVLALTSPSS 87
           + ++WG    GQ G   L DE+   +          +   +V  +A GG H + LT    
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE-- 168

Query: 88  VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
              G V++WG+        G++     P  V   +  R     I+ G  H+  + + G L
Sbjct: 169 ---GHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRL 217

Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
              G+  +GQLG GD +  S PV V    +  +  IA G  HS  L       +VYG+G 
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDK---GEVYGWGR 274

Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
           G+ G+LG+  +   S  +PQ    L + +I+ +
Sbjct: 275 GEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQV 307



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 117/303 (38%), Gaps = 60/303 (19%)

Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
           +   G G  GQLG G          V +    +V  +  G R+SL +   C    ++ +G
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAI---CDDGTMFTWG 63

Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
             +RG LG  +   ++ ++P     L +++I   +  G    A+  +G  Y WG      
Sbjct: 64  WNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122

Query: 261 ---------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
                     G     D+  P+     L+  Q A G  H +VLT +G V   G       
Sbjct: 123 CGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG------- 175

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
             P      + +SV + +V  L+ V++I +           G FH + L           
Sbjct: 176 -QPWPPGDIKQISVPV-RVQGLENVRLIAV-----------GAFHNLAL----------- 211

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                  E+  ++ WG  E+GQLG G+T    HP  V   D+     T +++  G   + 
Sbjct: 212 ------EEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDL----TLVDIAAGGWHST 261

Query: 432 AIS 434
           A++
Sbjct: 262 ALT 264


>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
          Length = 484

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 149/348 (42%), Gaps = 49/348 (14%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+WSWG    GQLG G      +P+L+   S  ++ + ACG  H LALT       G VF
Sbjct: 132 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 186

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           ++G    GQLG G   DA+       ++G    IT ++ G   S  +   G L++ G   
Sbjct: 187 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCPE 244

Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKNVH------------QIACGMRHS 190
           +GQLGH             +Y     P +V+ F+ K                +ACG  H+
Sbjct: 245 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHT 304

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
           LVL       +V+ +G G  G+LG ++ +   V  P++ + L D    G   I A    S
Sbjct: 305 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCS 358

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
            A+S  G L+ WG    S      P+++           A G + ++V   +  +     
Sbjct: 359 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 418

Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              G L   D +  SST     A ++V  LDG+   Q+A G  HS V+
Sbjct: 419 PTFGELGYGDHKPKSST-----AAQEVKTLDGIFSEQVAMGYSHSLVI 461



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 155/380 (40%), Gaps = 63/380 (16%)

Query: 76  GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
            AH L +T+      GK++SWGR   GQLGHG+      P+ +         I   + G 
Sbjct: 121 AAHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE--AIVLAACGR 173

Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLL 194
           NH+  ++D+G +F  G+   GQLG G+      SP ++  +  + + ++ACG   S+++ 
Sbjct: 174 NHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLM- 231

Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            DC GN +Y FG  + GQLG + D        ++    +D E+V       R  A+  E 
Sbjct: 232 -DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE- 279

Query: 255 HLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
                      T D    Q LP  ++ F   A G NH LVL     V   G   +G L  
Sbjct: 280 ----------KTKD---GQILPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGH 326

Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFP 370
            E+     P    L K+ +  G    QI AG   S  V+   G F W        +  +P
Sbjct: 327 AEQKDEMVP---RLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYP 383

Query: 371 PFFIN----------------VIAENRAIMTWGWG-EHGQLGLGNTCDQIHPKVVNLGDE 413
               +                ++A + + ++WG     G+LG G+      PK      E
Sbjct: 384 KAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQE 439

Query: 414 FQNRDTQLEVFCGSGFTYAI 433
            +  D         G+++++
Sbjct: 440 VKTLDGIFSEQVAMGYSHSL 459



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 68/303 (22%)

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           HS  ++  G L++ G    GQLGHGD +   +P  + +  ++ +   ACG  H+L L   
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 182

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
                V+ FG  K GQLG+  ++  +V  P   I  +   I  ++   + S  +  +G+L
Sbjct: 183 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 237

Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
           Y++G          CP+            LG N       DG+ +        +  D E 
Sbjct: 238 YSFG----------CPE---------YGQLGHN------SDGKFI---ARAQRIEYDCEL 269

Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
           V   R +++ +EK  +     +  V  + +A GA H+ V+  +                 
Sbjct: 270 VP--RRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLDSQ----------------- 310

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
                    + + +WG+G +G+LG     D++ P++V L D F  R    +++ G   ++
Sbjct: 311 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAT-QIYAGYTCSF 359

Query: 432 AIS 434
           A+S
Sbjct: 360 AVS 362



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 69/173 (39%), Gaps = 53/173 (30%)

Query: 72  LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
           +ACG  H L L S       +VFSWG G  G+LGH E  D + P+ V  FD      T I
Sbjct: 297 VACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQI 351

Query: 132 SAGWNHSGFVSDSGCLF-----------------------------TCGDG--------- 153
            AG+  S  VS+ G LF                              CG           
Sbjct: 352 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 411

Query: 154 --------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
                   TFG+LG+GD++  SS    +V +       Q+A G  HSLV+ +D
Sbjct: 412 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 464


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 24/331 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V S G  + GQLG  R      P+ +      +V +++CG  H LA+        G+VF
Sbjct: 43  RVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCH-----KGRVF 97

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G  
Sbjct: 98  AWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGKN 155

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G +  S +SP +V S     + Q+A G  HS  L    L    +G+GS   GQ
Sbjct: 156 SHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAGQ 212

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           L +S   +   S   ++IG L ++ ++ IS   + +A L  +G ++T+G       G++ 
Sbjct: 213 LALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSP 272

Query: 266 TSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSSTR 321
           T +   PQ +       SQ   G  H L      G+V+    G S     + PE ++   
Sbjct: 273 TPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPSDTSKPTHPEALTGNF 332

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +   L    +L  V+V  I AG   + V T
Sbjct: 333 DIR-CLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 56/319 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG         P  + +    NV  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHS 140

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +  +++WG+  NS   +   + +PS  S            +Q A G  H   L+ 
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G +  G L+   R   V S +PLS+       L  + VI I+ G EH+A    
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG-----ALKNLGVIYISCGDEHTA---- 249

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                 V+ ++  + T+G    GQLG   T ++  P++V   D 
Sbjct: 250 ----------------------VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287

Query: 414 FQNRDTQLEVFCGSGFTYA 432
             +     ++ CGS  T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 22/220 (10%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K+++WG    GQLG        SPQL+       +  ++CG  H+ A+T       G ++
Sbjct: 225 KIFTWGFNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTE-----DGDLY 279

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG G  GQLGH  +   L+PK V  F  +   ++ +S G N +  +  +  L+  G G 
Sbjct: 280 TWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGE 339

Query: 155 FGQLGHGDYRSH------------SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
           + QLG  +   H            SSP  V +  +K +  + CG  H+L L +D   N+V
Sbjct: 340 YAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALTED---NEV 396

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
           Y +G G  G LG++  R + V  PQ+   +   EI  ISA
Sbjct: 397 YVWGWGSSGCLGLNSKRFQLV--PQLVTSISGEEISCISA 434



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 109/228 (47%), Gaps = 29/228 (12%)

Query: 91  GKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
           GK+F+WG    GQLG         P+ V T  D     I  +S G  H G V++ G L+T
Sbjct: 224 GKIFTWGFNEKGQLGLKHRWFNSSPQLVKTLLD---VKIVSVSCGRQHIGAVTEDGDLYT 280

Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
            G G FGQLGH + +S+  P KV++F      V Q++CG   ++VL ++ +   +Y FG 
Sbjct: 281 WGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQI---LYAFGH 337

Query: 208 GKRGQLGV----------SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
           G+  QLG           S+D     S P+V   L D +I  ++     + AL+ +  +Y
Sbjct: 338 GEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVY 397

Query: 258 TWG------RGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTG 296
            WG       G NS      PQ L +S+S    S  + G  H L++ G
Sbjct: 398 VWGWGSSGCLGLNSKRFQLVPQ-LVTSISGEEISCISAGEKHSLIVRG 444



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 160/397 (40%), Gaps = 54/397 (13%)

Query: 36  VWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V+SWG G +GQLG   ++     P L+       V  +ACG  H LALT       G+V+
Sbjct: 55  VYSWGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQ-----GRVY 109

Query: 95  SWGR---------GSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSD 143
            WG+         G     G  EM     PK  +  +    +Y         + SG   D
Sbjct: 110 EWGQLHKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDD 169

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQV 202
                T        +G     + ++P++V   + N+ V  I+ G   S  + K     ++
Sbjct: 170 DDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTK---SGKI 226

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           + +G  ++GQLG+      S   PQ+   L D++IV +S       A++ +G LYTWG G
Sbjct: 227 FTWGFNEKGQLGLKHRWFNSS--PQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLG 284

Query: 263 F-------NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
                   N  S ++  +    SL+    SQ + G N  +VL G  ++L   G  HG  +
Sbjct: 285 VFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVL-GRNQILYAFG--HGEYA 341

Query: 313 DPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
                  T+ L + + +        KV++     +   V  G  H + L           
Sbjct: 342 QLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLAL----------- 390

Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
                  E+  +  WGWG  G LGL +   Q+ P++V
Sbjct: 391 ------TEDNEVYVWGWGSSGCLGLNSKRFQLVPQLV 421



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 152/367 (41%), Gaps = 63/367 (17%)

Query: 93  VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           V S G   +GQLG   + + L PK +    G    I   S+G  H+  VS  G +++ G 
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLESLKGK--VIVSCSSGEAHNICVSRFGDVYSWGR 60

Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG----- 206
           G  GQLG  +    S+ P  + + +++ V ++ACG  HSL L       +VY +G     
Sbjct: 61  GKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQ---GRVYEWGQLHKI 117

Query: 207 ----------SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG----DRSAALSA 252
                     +G     G+SK + +S+    V+  L+  + +  S +G    D  A+ S 
Sbjct: 118 DDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSE 177

Query: 253 EGHLYTWGR--GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
           +      G+   +N T+ +   Q L ++      + GW     +T  G++   G +  G 
Sbjct: 178 QSKGKHIGKIIDYNQTTPIQV-QGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQ 236

Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFP 370
           L    R  ++ P     + V  L  VK++ ++ G +H   VT                  
Sbjct: 237 LGLKHRWFNSSP-----QLVKTLLDVKIVSVSCGRQHIGAVT------------------ 273

Query: 371 PFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGF 429
                   E+  + TWG G  GQLG  N    +HPK V     F     Q+ +V CGS F
Sbjct: 274 --------EDGDLYTWGLGVFGQLGHSNVKSYLHPKKVA---AFSLNGIQVSQVSCGSNF 322

Query: 430 TYAISRH 436
           T  + R+
Sbjct: 323 TMVLGRN 329



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 158/390 (40%), Gaps = 78/390 (20%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKV 93
           V S G   +GQLG   + + L P++L   SL    +++C  G AH + ++       G V
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVL--ESLKGKVIVSCSSGEAHNICVSR-----FGDV 55

Query: 94  FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +SWGRG  GQLG  E M+ +  P  +      R  +  ++ G  HS  ++D G ++  G 
Sbjct: 56  YSWGRGKEGQLGVPEKMLFSTKPNLIKTLLHER--VVKVACGNFHSLALTDQGRVYEWGQ 113

Query: 153 ---------GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--- 200
                    G     G  +    S P K  S +  +V Q   G +    +     GN   
Sbjct: 114 LHKIDDSKTGLEATNGLLEMPGMSKP-KYQSIIENSVSQYLNGEKE---IYDSTSGNNDD 169

Query: 201 --QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
             +       K   +G   D  ++  + QV   L + E++ ISA    SAA++  G ++T
Sbjct: 170 DDEASTSEQSKGKHIGKIIDYNQTTPI-QVQGLLANEEVIDISAGWAFSAAVTKSGKIFT 228

Query: 259 WG-----------RGFNSTSDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGG 305
           WG           R FNS+     PQ + + L     ++  G  H+  +T DG++   G 
Sbjct: 229 WGFNEKGQLGLKHRWFNSS-----PQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGL 283

Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
              G L      S   P  VA     +L+G++V Q++ G+                    
Sbjct: 284 GVFGQLGHSNVKSYLHPKKVA---AFSLNGIQVSQVSCGSN------------------- 321

Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLG 395
                  F  V+  N+ +  +G GE+ QLG
Sbjct: 322 -------FTMVLGRNQILYAFGHGEYAQLG 344


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 39/340 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  + G+LG G   D   P+L+ +L++ SSV  +ACG  H  A+T     + G++
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 355

Query: 94  FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+   G LGHG  +    PK +    +G    +  +S G  H+  ++  G LFT 
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEG--LHVASVSCGPWHTALITSYGRLFTF 413

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDGTFG LGHGD  +   P +V S        ++CG+ H+  +++  +           +
Sbjct: 414 GDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 473

Query: 202 VYGFGSGKRGQLGV-SKD-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
           ++ +G G + +LG   KD R++   +P     L D     I+     +  L+  G ++T 
Sbjct: 474 LFTWGDGDKNRLGHGDKDPRLKPTCVP----ALIDYNFHKIACGHSLTVGLTTSGQVFTM 529

Query: 259 ----WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
               +G+  N  +D   P  +   L+     + + G  HV  LT   EV   G   +G L
Sbjct: 530 GSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRL 589

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +      P  V       L    V  IA G+ ++A +
Sbjct: 590 GHGDLEDRKVPTIVEA-----LKDRHVKYIACGSNYTAAI 624



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 175/406 (43%), Gaps = 69/406 (16%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACG  H   +T       G++F+WG  S G+LGHG   D  
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQ-----GEIFTWGEESGGRLGHGIGKDVF 322

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +P+ V        ++  ++ G  H+  V+ +G L+T GDGT   G LGHG   SH  P +
Sbjct: 323 HPRLVESLTATS-SVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKR 381

Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           ++ S    +V  ++CG  H+ ++       +++ FG G  G LG       +V  P+   
Sbjct: 382 IAGSLEGLHVASVSCGPWHTALITS---YGRLFTFGDGTFGVLGHGDK--ETVQYPREVE 436

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST-----SDVNC-P 272
            L  +  + +S     +AA+             + G L+TWG G  +       D    P
Sbjct: 437 SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 496

Query: 273 QSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             +P+ + ++   +   H L   LT  G+V  +G + +G L + +      P  V  +  
Sbjct: 497 TCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ-TDGKLPCLVEDKLA 555

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
           S      V +I+ GA H A +T +                            + TWG G 
Sbjct: 556 SEF----VEEISCGAYHVAALTSR--------------------------NEVYTWGKGA 585

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V   +  ++R  +  + CGS +T AI  H
Sbjct: 586 NGRLGHGDLEDRKVPTIV---EALKDRHVKY-IACGSNYTAAICLH 627


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 157/339 (46%), Gaps = 38/339 (11%)

Query: 36  VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V S G  + GQLG  G    E   ++  L +L  V++++CG  H LA+        G+VF
Sbjct: 44  VQSCGDNSRGQLGRKGTPRGEQPERIPALETLH-VALVSCGKEHSLAVCH-----KGRVF 97

Query: 95  SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG  S GQLG GE  +  + PK +    G +  I  ++ G  HS  +S+ G +F+ G  
Sbjct: 98  AWGAASEGQLGIGEFKETTFIPKKIKTLAGIK--IIQVACGHYHSVALSEDGQVFSWGTN 155

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G ++ S +SP +V S     + Q+A G  HS  L    L    +G+GS   GQ
Sbjct: 156 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL---SLSGTSFGWGSNNAGQ 212

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           L +S +         V+IG L  + +V IS     +A L+ +G ++T+G       G + 
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDP 272

Query: 266 TSDVNCPQSLPSSLSF-SQAALGWNHVLV-LTGDGEVLMLG--------GSHHGMLSDPE 315
           T++   PQ +       SQ   G +H L  +   G+V+  G          H G L++  
Sbjct: 273 TAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGALAESS 332

Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            +S        L    +L  V+V  I AG   + V T +
Sbjct: 333 DIS-------CLVSAKDLADVQVKHIFAGTYANFVTTSQ 364



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 19/254 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WGA ++GQLG G   +    P+ +   +   +  +ACG  H +AL+       G+V
Sbjct: 95  RVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSE-----DGQV 149

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           FSWG  S GQLG G E      P+ V   +G    +  ++AG +HS  +S SG  F  G 
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEG--IPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 153 GTFGQL---GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
              GQL   G+        PV + +     V  I+CG +H+ VL +D    +V+ FG   
Sbjct: 208 NNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQD---GKVFTFGDNS 264

Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFNSTSD 268
            GQLG   D       PQ+   +  + +  I    D + A +   G + ++GRG    S 
Sbjct: 265 YGQLG--HDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASR 321

Query: 269 VNCPQSLPSSLSFS 282
              P +L  S   S
Sbjct: 322 SPHPGALAESSDIS 335



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 56/320 (17%)

Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           T+   ++G +HS  +   G + +CGD + GQLG         P ++ +    +V  ++CG
Sbjct: 24  TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCG 83

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
             HSL +   C   +V+ +G+   GQLG+ + +  +  +P+    L  I+I+ ++     
Sbjct: 84  KEHSLAV---CHKGRVFAWGAASEGQLGIGEFK-ETTFIPKKIKTLAGIKIIQVACGHYH 139

Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLT 295
           S ALS +G +++WG   NS   +   +  PS  S            +Q A G +H   L+
Sbjct: 140 SVALSEDGQVFSWGT--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197

Query: 296 GDGEVLMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
             G     G ++ G L+   +   V   +P+S+       L  + V+ I+ G +H+AV+T
Sbjct: 198 LSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIG-----ALKTLGVVSISCGYKHTAVLT 252

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
                                     ++  + T+G   +GQLG   T ++  P++V   +
Sbjct: 253 --------------------------QDGKVFTFGDNSYGQLGHDPTAEKRGPQLV---E 283

Query: 413 EFQNRDTQLEVFCGSGFTYA 432
             +   +Q++  CGS  T A
Sbjct: 284 RIEGLVSQID--CGSDHTLA 301


>gi|301786789|ref|XP_002928812.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Ailuropoda melanoleuca]
          Length = 468

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 169/427 (39%), Gaps = 75/427 (17%)

Query: 39  WGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +GA + GQLG G   D   PQ LN       +  +  GG H   +T       G +F  G
Sbjct: 25  FGANSYGQLGLGHKEDVFLPQQLNDFCKPECIRRITGGGGHSAVVTD-----DGGLFVCG 79

Query: 98  RGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
               GQLG G   D LY     +  D     I  ++ GW+ +  +++SG + +CG  +FG
Sbjct: 80  LNKDGQLGLGHTEDVLYFTACRSLLD---CPIQQVACGWDFTIILTESGQVLSCGSNSFG 136

Query: 157 QLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRG 211
           QLG  HG  R      +    +++ V  IA G+RH+L      +  Q +G G   SG+R 
Sbjct: 137 QLGVPHGPRRCMVP--QAIELLSEKVVCIAAGLRHALAATASGIVFQ-WGTGLASSGRRL 193

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS-----T 266
             G +     +   P    GL + +   + A  D SA+L+  G LY WG   +       
Sbjct: 194 CPGQTLPPFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLASLA 253

Query: 267 SDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----------- 311
           + +  PQ + +    ++       GW H++  T  G+V   G + +G L           
Sbjct: 254 AFLPMPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLESHEDWK 313

Query: 312 ---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
               DP R  S  P       +  L G    +++ G+EH+  V G               
Sbjct: 314 LQNQDPSRPCSG-PQKSMPSSLHCLTGAA--EVSCGSEHNLAVIGG-------------- 356

Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 428
                           +WGW EHG  G G+  D   PK V    +       L V CG+G
Sbjct: 357 -------------TCYSWGWNEHGMCGDGSEADIWAPKPV----QALRSSLGLLVGCGAG 399

Query: 429 FTYAISR 435
            + A+ +
Sbjct: 400 HSLALCQ 406



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 42/101 (41%), Gaps = 24/101 (23%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-----------------LSSLSSVSMLACGGA 77
           KV++WG    GQLG  +L      +L N                 L  L+  + ++CG  
Sbjct: 290 KVFTWGRADYGQLGR-KLESHEDWKLQNQDPSRPCSGPQKSMPSSLHCLTGAAEVSCGSE 348

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
           H LA      VIGG  +SWG    G  G G   D   PKPV
Sbjct: 349 HNLA------VIGGTCYSWGWNEHGMCGDGSEADIWAPKPV 383


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 39/340 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  + G+LG G   D   P+L+ +L++ SSV  +ACG  H  A+T     + G++
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 355

Query: 94  FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+   G LGHG  +    PK +    +G    +  +S G  H+  ++  G LFT 
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEG--LHVASVSCGPWHTALITSYGRLFTF 413

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDGTFG LGHGD  +   P +V S        ++CG+ H+  +++  +           +
Sbjct: 414 GDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 473

Query: 202 VYGFGSGKRGQLGV-SKD-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
           ++ +G G + +LG   KD R++   +P     L D     I+     +  L+  G ++T 
Sbjct: 474 LFTWGDGDKNRLGHGDKDPRLKPTCVP----ALIDYNFHKIACGHSLTVGLTTSGQVFTM 529

Query: 259 ----WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
               +G+  N  +D   P  +   L+     + + G  HV  LT   EV   G   +G L
Sbjct: 530 GSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRL 589

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +      P  V       L    V  IA G+ ++A +
Sbjct: 590 GHGDLEDRKVPTIVEA-----LKDRHVKYIACGSNYTAAI 624



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 175/406 (43%), Gaps = 69/406 (16%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACG  H   +T       G++F+WG  S G+LGHG   D  
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQ-----GEIFTWGEESGGRLGHGIGKDVF 322

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +P+ V        ++  ++ G  H+  V+ +G L+T GDGT   G LGHG   SH  P +
Sbjct: 323 HPRLVESLTATS-SVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKR 381

Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           ++ S    +V  ++CG  H+ ++       +++ FG G  G LG       +V  P+   
Sbjct: 382 IAGSLEGLHVASVSCGPWHTALITS---YGRLFTFGDGTFGVLGHGDK--ETVQYPREVE 436

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST-----SDVNC-P 272
            L  +  + +S     +AA+             + G L+TWG G  +       D    P
Sbjct: 437 SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 496

Query: 273 QSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             +P+ + ++   +   H L   LT  G+V  +G + +G L + +      P  V  +  
Sbjct: 497 TCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ-TDGKLPCLVEDKLA 555

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
           S      V +I+ GA H A +T +                            + TWG G 
Sbjct: 556 SEF----VEEISCGAYHVAALTSR--------------------------NEVYTWGKGA 585

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+  D+  P +V   +  ++R  +  + CGS +T AI  H
Sbjct: 586 NGRLGHGDLEDRKVPTIV---EALKDRHVKY-IACGSNYTAAICLH 627


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 24/331 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V S G  + GQLG  R      P+ +      +V +++CG  H LA+        G+VF
Sbjct: 43  RVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCH-----KGRVF 97

Query: 95  SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +WG GS GQLG GE  + +  PK +T  +G +  I  +S G  HS  +S    +F+ G  
Sbjct: 98  AWGAGSEGQLGIGEFKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGKN 155

Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
           + GQLG G +  S +SP +V S     + Q+A G  HS  L    L    +G+GS   GQ
Sbjct: 156 SHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAGQ 212

Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
           L +S   +   S   ++IG L ++ ++ IS   + +A L  +G ++T+G       G++ 
Sbjct: 213 LALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSP 272

Query: 266 TSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSSTR 321
           T +   PQ +       SQ   G  H L      G+V+    G S     + PE ++   
Sbjct: 273 TPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPSDTSKPTHPEALTGNF 332

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
            +   L    +L  V+V  I AG   + V T
Sbjct: 333 DIR-CLISAEDLVDVQVKHIFAGTYANFVTT 362



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 56/319 (17%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +  + +CGD + GQLG         P  + +    NV  ++CG 
Sbjct: 25  LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
            HSL +   C   +V+ +G+G  GQLG+ + +  S + P+    L+ I+I+ +S     S
Sbjct: 85  EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKITTLNGIKIIQVSCGHYHS 140

Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
            ALS +  +++WG+  NS   +   + +PS  S            +Q A G  H   L+ 
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
            G     G +  G L+   R   V S +PLS+       L  + VI I+ G EH+A    
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG-----ALKNLGVIYISCGDEHTA---- 249

Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
                                 V+ ++  + T+G    GQLG   T ++  P++V   D 
Sbjct: 250 ----------------------VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287

Query: 414 FQNRDTQLEVFCGSGFTYA 432
             +     ++ CGS  T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 15/230 (6%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WG     QLG G  +  L P  ++ + ++  V  +ACG  H L LTS      G+V
Sbjct: 289 EVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTS-----DGEV 343

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           ++WG  +SGQ+G G   +   P+ VT    ++   T+I+ G   S  V +SG ++  G  
Sbjct: 344 YAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIA-TNIACGQMCSMAVVESGEVYVWGYN 402

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             GQLG G   +  +P ++++     V ++ CG  H+LVL  +    Q+Y +G+   GQL
Sbjct: 403 GNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDE---GQLYAWGANSYGQL 459

Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
           G      +S  +P   + +    I+ I+A  +   SAA +  GH+Y WG+
Sbjct: 460 GTGNKSNQSYPIP---VPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWGQ 506



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 141/319 (44%), Gaps = 42/319 (13%)

Query: 60  LLNLSSLSSVSMLACGGAHVLALTSP--------SSVIGG------------KVFSWGRG 99
           ++ ++ L ++ ML  G   + AL SP        + V G             +VF  G  
Sbjct: 184 VIQVTFLFTLKMLDVGKWPIFALCSPEELKLIRQACVFGSAGNEVLYATENDEVFVLGTN 243

Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
            SG LG G++ + + P+ +    G + T     +G  H    +  G ++T G   + QLG
Sbjct: 244 CSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSG-PHVVVATAEGEVYTWGHNAYSQLG 302

Query: 160 HGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
           +G       P  VS+  VNK V ++ACG  HSLVL  D    +VY +G    GQ+G    
Sbjct: 303 NGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSD---GEVYAWGYNNSGQVGSGST 359

Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP 272
             + +   +VT  L +     I+     S A+   G +Y WG       G  S+ +   P
Sbjct: 360 ANQPIPR-RVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTP 418

Query: 273 QSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             + +   +   +   G+ H LVLT +G++   G + +G L    + + + P+ V +EK 
Sbjct: 419 CRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPVEK- 477

Query: 331 SNLDGVKVIQIAAGAEHSA 349
                 ++I+IAA   HSA
Sbjct: 478 -----DRIIEIAAC--HSA 489



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 46/284 (16%)

Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM-RHS 190
           SAG N   + +++  +F  G    G LG GD ++   P ++ S   K +  ++ G   H 
Sbjct: 223 SAG-NEVLYATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHV 281

Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
           +V   +    +VY +G     QLG        +    V+  L + ++V ++     S  L
Sbjct: 282 VVATAE---GEVYTWGHNAYSQLGNGTTNHGLIPC-HVSTNLVNKKVVEVACGSHHSLVL 337

Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
           +++G +Y WG       G  ST++   P+ + S L    A   A G    + +   GEV 
Sbjct: 338 TSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVY 397

Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
           + G + +G L      +   P      +++ L G++V ++  G  H+ V+T         
Sbjct: 398 VWGYNGNGQLGLGSSGNQPTPC-----RIAALQGIRVQRVTCGYAHTLVLT--------- 443

Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
                            +   +  WG   +GQLG GN  +Q +P
Sbjct: 444 -----------------DEGQLYAWGANSYGQLGTGNKSNQSYP 470



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 33/144 (22%)

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           HV+V T +GEV   G + +  L +        P  V+    +NL   KV+++A G+ HS 
Sbjct: 280 HVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVS----TNLVNKKVVEVACGSHHSL 335

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
           V+T                           +  +  WG+   GQ+G G+T +Q  P+ V 
Sbjct: 336 VLTS--------------------------DGEVYAWGYNNSGQVGSGSTANQPIPRRVT 369

Query: 410 LGDEFQNRDTQLEVFCGSGFTYAI 433
                QN+     + CG   + A+
Sbjct: 370 --SCLQNK-IATNIACGQMCSMAV 390


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 132/287 (45%), Gaps = 32/287 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           +V+ WG G+ G+LG     D   P+++       +  + CG     ALT       G+++
Sbjct: 330 EVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCALTH-----SGELY 384

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFF---DGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           +WG   +G     EM       P   F   DG   TI+ ++ G  H+  VS SG LFT G
Sbjct: 385 TWGDNKNGANLTDEMRTRSQWLPYKLFGPLDG--ITISKVACGEWHTAIVSLSGQLFTYG 442

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK--------DCLGNQVY 203
           DGTFG LGHG  +S S P +V+S    +V  +ACG  H+  ++         + +G +++
Sbjct: 443 DGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSWHTAAIVDIIADRFKFNAVGGKLF 502

Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
            +G G +G+LG S    + V  P     L D + + +S     + AL+  G +YT G   
Sbjct: 503 TWGDGDKGRLGHSDMEKKLV--PTCVAKLVDYDFIRVSCGRMLTVALTNTGKVYTMGSSV 560

Query: 264 NSTSDVNCPQSLPSSLSFSQAAL----------GWNHVLVLTGDGEV 300
           +    +  PQ+   S++  +  L          G  HV VLT  G V
Sbjct: 561 H--GQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNV 605



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 192/434 (44%), Gaps = 81/434 (18%)

Query: 36  VWSWGAGTDG--------QLGTGRLH--DELSPQLLNLSSLSSVSMLACGGAHVLALTSP 85
           V  WG G +G        +LG   +   D L P+LL  +++  V  ++ G  H   +T  
Sbjct: 269 VLMWGEGVEGGNIGGMVQRLGNQSVMQVDALVPKLLESTAMLDVRSISLGRKHAALITK- 327

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
                G+VF WG GS G+LGH   +D   PK V   D     I  +  G   +  ++ SG
Sbjct: 328 ----RGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDD--VHIKSVVCGEYQTCALTHSG 381

Query: 146 CLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQV 202
            L+T GD   G     + R+ S   P K+   ++   + ++ACG  H+ ++    L  Q+
Sbjct: 382 ELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHTAIV---SLSGQL 438

Query: 203 YGFGSGKRGQLG------VSKDR----IRSVSLPQVTIG-LHDIEIVGISANGDRSAALS 251
           + +G G  G LG      VS  +    +R +S+  V  G  H   IV I A  DR    +
Sbjct: 439 FTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSWHTAAIVDIIA--DRFKFNA 496

Query: 252 AEGHLYTWGRGFNST---SDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLM 302
             G L+TWG G       SD+   + +P+ ++      F + + G    + LT  G+V  
Sbjct: 497 VGGKLFTWGDGDKGRLGHSDME-KKLVPTCVAKLVDYDFIRVSCGRMLTVALTNTGKVYT 555

Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
           +G S HG L +P+  +  + +++   K   L    V +I++G+ H AV+T   +      
Sbjct: 556 MGSSVHGQLGNPQ--AKDKSITIVEGK---LKEEFVKEISSGSYHVAVLTSGGN------ 604

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
                               + TWG G +GQLGLGN  D+  P  V   +  ++R+ +  
Sbjct: 605 --------------------VYTWGKGGNGQLGLGNIEDRNSPTYV---EALRDREVE-S 640

Query: 423 VFCGSGFTYAISRH 436
           + CGS  T AI  H
Sbjct: 641 IACGSNLTAAICLH 654



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 13/222 (5%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS------PSSV 88
           +++++G GT G LG G L     P+ +      SV  +ACG  H  A+          + 
Sbjct: 437 QLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSWHTAAIVDIIADRFKFNA 496

Query: 89  IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
           +GGK+F+WG G  G+LGH +M   L P  V       Y    +S G   +  ++++G ++
Sbjct: 497 VGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKLVD--YDFIRVSCGRMLTVALTNTGKVY 554

Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
           T G    GQLG+   +  S  +       + V +I+ G  H  VL     G  VY +G G
Sbjct: 555 TMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTS---GGNVYTWGKG 611

Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
             GQLG+    I   + P     L D E+  I+   + +AA+
Sbjct: 612 GNGQLGLGN--IEDRNSPTYVEALRDREVESIACGSNLTAAI 651


>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 15/198 (7%)

Query: 68  SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
           +V +++ G +H +AL     + G  + SWGRG  GQLGHG+  D L P  ++ FD     
Sbjct: 23  AVVLVSAGASHSVAL-----LAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPG 77

Query: 128 ITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
           IT +  G +H + +  D   +++ G G FG+LGHG+     +P  V +     + QIACG
Sbjct: 78  ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACG 137

Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
             H L +    +  +V  +G  + GQLG+  ++D +    LPQ       + +  I+A  
Sbjct: 138 DSHCLAV---TMAGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQSFEGVCVKMIAAGA 190

Query: 245 DRSAALSAEGHLYTWGRG 262
           + +AA++ +G LY WG G
Sbjct: 191 EHTAAVTEDGDLYGWGWG 208



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 10/172 (5%)

Query: 6   MEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
            +    G +++I  A       E+EQQV   +SWG G  G+LG G   D  +PQ +    
Sbjct: 71  FDAAAPGITSVICGADHTTAYSEDEQQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQ 127

Query: 66  LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
              +  +ACG +H LA+T     + G+V SWGR  +GQLG G   D+L P+ +  F+G  
Sbjct: 128 GIKIKQIACGDSHCLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEG-- 180

Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
             +  I+AG  H+  V++ G L+  G G +G LG GD      P KVSS  N
Sbjct: 181 VCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEN 232



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 11/188 (5%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
           SWG G DGQLG G   D L P +L+   ++   ++ + CG  H  A +        +V+S
Sbjct: 45  SWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQ----QVYS 100

Query: 96  WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
           WG G  G+LGHG   D   P+PV    G +  I  I+ G +H   V+ +G + + G    
Sbjct: 101 WGWGDFGRLGHGNSSDVFTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQN 158

Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           GQLG G       P K+ SF    V  IA G  H+  + +D     +YG+G G+ G LG+
Sbjct: 159 GQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 215

Query: 216 SKDRIRSV 223
                R V
Sbjct: 216 GDRNDRLV 223



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 109/240 (45%), Gaps = 51/240 (21%)

Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIE--IV 238
           ++ G  HS+ LL    GN +  +G G+ GQLG   ++DR+    +P V  G       I 
Sbjct: 27  VSAGASHSVALLA---GNVLCSWGRGEDGQLGHGDAEDRL----VPTVLSGFDAAAPGIT 79

Query: 239 GISANGDRSAALSA-EGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
            +    D + A S  E  +Y+WG       G  ++SDV  PQ + +   +   Q A G +
Sbjct: 80  SVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDS 139

Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
           H L +T  GEV   G + +G L       S  P     +K+ + +GV V  IAAGAEH+A
Sbjct: 140 HCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLP-----QKIQSFEGVCVKMIAAGAEHTA 194

Query: 350 VVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
            VT                          E+  +  WGWG +G LGLG+  D++ P+ V+
Sbjct: 195 AVT--------------------------EDGDLYGWGWGRYGNLGLGDRNDRLVPEKVS 228


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 132/286 (46%), Gaps = 22/286 (7%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ +G+   GQLG G       P  +       V ++ACG  H L  T+      GKV+
Sbjct: 56  KLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTA-----KGKVY 110

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           + G  S GQLG G+  +    K + FFD     I  ++AG N S  ++ SG LF  GD T
Sbjct: 111 ASGGNSEGQLGLGDCEERTSFKRLDFFDSQ-GPIKMLAAGSNTSAALTVSGKLFMWGDNT 169

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQ+G G     SSP +VS  V + +  ++CG  HS ++  D     +Y FG    G+LG
Sbjct: 170 EGQIGLGKESQVSSPQEVS--VGQPISWVSCGYYHSALVTVD---GALYTFGERDSGKLG 224

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------FNS 265
           +   ++    +PQ+   + +  +  ++  G  + AL AEG++YT+G G         F  
Sbjct: 225 LGTHQLPGHRVPQLVKSIKE-PVRQVACGGGHTVAL-AEGNVYTFGLGQFGQLGHGTFIF 282

Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
            S V             Q   G NH  V+T DG +   G   HG L
Sbjct: 283 ESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKL 328



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 128/321 (39%), Gaps = 64/321 (19%)

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
            I+ G  H+  ++++G LF  G   +GQLG G   + + P  V +  ++ V  +ACG  H
Sbjct: 40  RIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNH 99

Query: 190 SLVLLKDCLGN-QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
           +L+    C    +VY  G    GQLG+     R+ S  ++        I  ++A  + SA
Sbjct: 100 TLI----CTAKGKVYASGGNSEGQLGLGDCEERT-SFKRLDFFDSQGPIKMLAAGSNTSA 154

Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
           AL+  G L+ WG       G    S V+ PQ +      S  + G+ H  ++T DG +  
Sbjct: 155 ALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISWVSCGYYHSALVTVDGALYT 214

Query: 303 LGGSHHGML----------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVV 351
            G    G L            P+ V S +                V Q+A G  H+ A+ 
Sbjct: 215 FGERDSGKLGLGTHQLPGHRVPQLVKSIKE--------------PVRQVACGGGHTVALA 260

Query: 352 TGKFHWVRL----------FII-SYTPFFPPFFIN--------------VIAENRAIMTW 386
            G  +   L          FI  S  P     F                VI E+  + T+
Sbjct: 261 EGNVYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTF 320

Query: 387 GWGEHGQLGLG--NTCDQIHP 405
           G G HG+LGLG  N  +Q  P
Sbjct: 321 GDGRHGKLGLGEENFTNQFKP 341



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 36  VWSWGAGTDGQLGTG--RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++G    G+LG G  +L     PQL+  S    V  +ACGG H +AL        G V
Sbjct: 212 LYTFGERDSGKLGLGTHQLPGHRVPQLVK-SIKEPVRQVACGGGHTVALAE------GNV 264

Query: 94  FSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           +++G G  GQLGHG  + ++  P+ V  F   R     +  G NH+  +++ G L+T GD
Sbjct: 265 YTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGR--ACQVVCGENHTAVITEDGLLYTFGD 322

Query: 153 GTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
           G  G+LG G+  + +   P     F+  NV    CG  H +VL +
Sbjct: 323 GRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVLAR 367



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           K++ WG  T+GQ+G G+     SPQ +++     +S ++CG  H   +T     + G ++
Sbjct: 161 KLFMWGDNTEGQIGLGKESQVSSPQEVSVGQ--PISWVSCGYYHSALVT-----VDGALY 213

Query: 95  SWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           ++G   SG+LG G  ++     P+ V      +  +  ++ G  H+  +++ G ++T G 
Sbjct: 214 TFGERDSGKLGLGTHQLPGHRVPQLVKSI---KEPVRQVACGGGHTVALAE-GNVYTFGL 269

Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           G FGQLGHG +   S  P  V  F      Q+ CG  H+ V+ +D L   +Y FG G+ G
Sbjct: 270 GQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGL---LYTFGDGRHG 326

Query: 212 QLGVSKD 218
           +LG+ ++
Sbjct: 327 KLGLGEE 333


>gi|330805668|ref|XP_003290801.1| hypothetical protein DICPUDRAFT_56953 [Dictyostelium purpureum]
 gi|325079048|gb|EGC32668.1| hypothetical protein DICPUDRAFT_56953 [Dictyostelium purpureum]
          Length = 920

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 157/386 (40%), Gaps = 97/386 (25%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
           P  LN         +A G AH L + S      G+++S G+G++G+ G G        KP
Sbjct: 59  PTFLNNQDDLYSKSVAIGLAHSLLIDSK-----GQLYSTGKGANGRTGMGNESTIFNFKP 113

Query: 118 VTF-------FDGHRYT-------------------ITHISAGWNHSGFVSDSGCLFTCG 151
           V F        + +RY+                   +  IS G  HS F++++  LFT G
Sbjct: 114 VVFNNDELTEANKYRYSSSYYQPRFLNRPITGNHTKVIKISCGGAHSAFITENFELFTFG 173

Query: 152 DGTFGQLGHG----------------DYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLL 194
               GQLGHG                +Y   S  +K +  +   NV  +ACG+ H++  L
Sbjct: 174 RNDRGQLGHGLLDQLVIPKKVNYQHYEYEESSKSIKENKLITASNVDLVACGLNHTVFSL 233

Query: 195 KD-CLGNQVYGFGSGKRGQLG-VSKDR---------IRSVSLPQVTIGLHDIEIVGISAN 243
            D C    VY  G  K  QLG VSK+          I S++LP+  +      I  IS  
Sbjct: 234 VDGC----VYSMGDNKHFQLGYVSKEDEEMEYRPRLIESLNLPKKQLEQRYTNIKSISCG 289

Query: 244 GDRSAALSAEGHLYTWGR------GFN--STSDVNCPQSL-------------------- 275
            + S  +  +G++YTWG       GF+   T  +  P+ L                    
Sbjct: 290 SNFSVCV-KQGNIYTWGLNSVGQCGFSPKETKSITAPKLLIIYNDASTLSNEDKNQSGTN 348

Query: 276 ---PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL--SVALEKV 330
                + +F+Q + G +H L LT +GEV   G S HG +     +S+      S  ++  
Sbjct: 349 KKKKPTFTFTQVSCGNDHSLALTTNGEVFAWGESKHGQIGFATSMSTLVDFDTSTPIKVR 408

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFH 356
            +L    + QIAAGA HS  ++   H
Sbjct: 409 ESLSNESITQIAAGAYHSMALSRSNH 434



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 112/281 (39%), Gaps = 64/281 (22%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLN-----------------LSSLSSVSMLACGGA 77
           +++++G    GQLG G L   + P+ +N                 L + S+V ++ACG  
Sbjct: 168 ELFTFGRNDRGQLGHGLLDQLVIPKKVNYQHYEYEESSKSIKENKLITASNVDLVACGLN 227

Query: 78  HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA---LYPKPVTFFD------GHRYT- 127
           H +      S++ G V+S G     QLG+    D      P+ +   +        RYT 
Sbjct: 228 HTVF-----SLVDGCVYSMGDNKHFQLGYVSKEDEEMEYRPRLIESLNLPKKQLEQRYTN 282

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-----------------HGDYRSHSSPV 170
           I  IS G N S  V   G ++T G  + GQ G                 + D  + S+  
Sbjct: 283 IKSISCGSNFSVCVK-QGNIYTWGLNSVGQCGFSPKETKSITAPKLLIIYNDASTLSNED 341

Query: 171 KVSSFVNKNVH------QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
           K  S  NK         Q++CG  HSL L       +V+ +G  K GQ+G +      V 
Sbjct: 342 KNQSGTNKKKKPTFTFTQVSCGNDHSLAL---TTNGEVFAWGESKHGQIGFATSMSTLVD 398

Query: 225 LP-----QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
                  +V   L +  I  I+A    S ALS   H+Y WG
Sbjct: 399 FDTSTPIKVRESLSNESITQIAAGAYHSMALSRSNHIYCWG 439



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 47/209 (22%)

Query: 36  VWSWGAGTDGQLGTGRLHDE--LSPQLL----NLSSLS-----------------SVSML 72
           +++WG  + GQ G      +   +P+LL    + S+LS                 + + +
Sbjct: 301 IYTWGLNSVGQCGFSPKETKSITAPKLLIIYNDASTLSNEDKNQSGTNKKKKPTFTFTQV 360

Query: 73  ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE----MVDALYPKPVTFFDG-HRYT 127
           +CG  H LALT+      G+VF+WG    GQ+G       +VD     P+   +     +
Sbjct: 361 SCGNDHSLALTT-----NGEVFAWGESKHGQIGFATSMSTLVDFDTSTPIKVRESLSNES 415

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-----GDYRSHSSPVKVSSFVNKN--- 179
           IT I+AG  HS  +S S  ++  G   + Q+G      G  +  S+P ++ + V++N   
Sbjct: 416 ITQIAAGAYHSMALSRSNHIYCWGLNDYYQVGEEIESMGHQKIISTPYRIRAPVSENSKL 475

Query: 180 ------VHQIACGMRHSLVLLKDCLGNQV 202
                 + QIA G R S+ + +  L  ++
Sbjct: 476 KSKERPILQIAAGGRSSMAIRRFLLNIEI 504


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 39/340 (11%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG  + G+LG G   D   P+L+ +L++ SSV  +ACG  H  A+T     + G++
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 355

Query: 94  FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
           ++WG G+   G LGHG  +    PK +    +G    +  ++ G  H+  ++  G LFT 
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEG--LHVASVTCGPWHTALITSYGRLFTF 413

Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
           GDGTFG LGHGD  +   P +V S        ++CG+ H+  +++  +           +
Sbjct: 414 GDGTFGVLGHGDRETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 473

Query: 202 VYGFGSGKRGQLGV-SKD-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
           ++ +G G + +LG   KD R++   +P     L D     I+     +  L+  G ++T 
Sbjct: 474 LFTWGDGDKNRLGHGDKDPRLKPTCVP----ALIDYNFHKIACGHSLTVGLTTSGQVFTM 529

Query: 259 ----WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
               +G+  N  +D   P  +   L+     + + G  HV  LT   EV   G   +G L
Sbjct: 530 GSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRL 589

Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
              +      P  V       L    V  IA G+ ++A +
Sbjct: 590 GHGDLEDRKVPTLVEA-----LKDRHVKYIACGSNYTAAI 624



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 176/406 (43%), Gaps = 69/406 (16%)

Query: 54  DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
           D L P+ L  + +  V  +ACG  H   +T       G++F+WG  S G+LGHG   D  
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTRQ-----GEIFTWGEESGGRLGHGIGKDVF 322

Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
           +P+ V        ++  ++ G  H+  V+ +G L+T GDGT   G LGHG   SH  P +
Sbjct: 323 HPRLVESLTATS-SVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKR 381

Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
           ++  +   +V  + CG  H+ ++       +++ FG G  G LG   DR  +V  P+   
Sbjct: 382 IAGCLEGLHVASVTCGPWHTALITS---YGRLFTFGDGTFGVLG-HGDR-ETVQYPREVE 436

Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST-----SDVNC-P 272
            L  +  + +S     +AA+             + G L+TWG G  +       D    P
Sbjct: 437 SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 496

Query: 273 QSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
             +P+ + ++   +   H L   LT  G+V  +G + +G L + +      P  V  +  
Sbjct: 497 TCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ-TDGKLPCLVEDKLA 555

Query: 331 SNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGE 390
           S      V +I+ GA H A +T +                            + TWG G 
Sbjct: 556 SEF----VEEISCGAYHVAALTSR--------------------------NEVYTWGKGA 585

Query: 391 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 436
           +G+LG G+  D+   KV  L +  ++R  +  + CGS +T AI  H
Sbjct: 586 NGRLGHGDLEDR---KVPTLVEALKDRHVKY-IACGSNYTAAICLH 627


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 14/227 (6%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           S+G  + GQLG   +  +  P+ +       V +++CG  H LA+        G+VF+WG
Sbjct: 46  SYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAV-----CYKGRVFAWG 100

Query: 98  RGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
            GS GQLG GE  +  L P+ +      +  I  +S G +HS  +S+ G LFT G  + G
Sbjct: 101 AGSEGQLGIGEFNEINLIPRKIKTLTDIK--IIQVSCGHHHSLALSEDGRLFTWGSNSHG 158

Query: 157 QLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           QLG G +  S +SP +V       + Q+A G  HS  L    L    +G+GS   GQL +
Sbjct: 159 QLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFAL---SLSGASFGWGSNSEGQLAL 215

Query: 216 SKDRIRSV--SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
            K  +  V  S P     L ++ +V IS   + +A L+  G ++T+G
Sbjct: 216 RKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFG 262



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 54/297 (18%)

Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
           +   ++G  HS  +  +G L + GD + GQLG  D +    P ++ +     V  ++CG 
Sbjct: 25  LRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGK 84

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
            HSL +   C   +V+ +G+G  GQLG+ +     ++L P+    L DI+I+ +S     
Sbjct: 85  EHSLAV---CYKGRVFAWGAGSEGQLGIGE--FNEINLIPRKIKTLTDIKIIQVSCGHHH 139

Query: 247 SAALSAEGHLYTWGRGFNSTSDV----NCP-QSLPSSLSF------SQAALGWNHVLVLT 295
           S ALS +G L+TWG   NS   +     CP Q+ P  + F      +Q A G  H   L+
Sbjct: 140 SLALSEDGRLFTWGS--NSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALS 197

Query: 296 GDGEVLMLGGSHHGMLSDPER----VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
             G     G +  G L+  ++    V S++P S     V  L+ + V+ I+ G EH+AV+
Sbjct: 198 LSGASFGWGSNSEGQLALRKKNVPVVQSSKPCS-----VDALENLGVVYISCGYEHTAVL 252

Query: 352 TGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
           T                          +   + T+G   +GQLG   T  +  P++V
Sbjct: 253 T--------------------------QTGKVFTFGGNSYGQLGYSPTAGKEGPQLV 283



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 135/298 (45%), Gaps = 33/298 (11%)

Query: 73  ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
           A G  H L L S      G++ S+G  S GQLG  ++     PK +   +  R  +  +S
Sbjct: 29  ASGERHSLLLLS-----NGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDL--VS 81

Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSL 191
            G  HS  V   G +F  G G+ GQLG G++   +  P K+ +  +  + Q++CG  HSL
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSL 141

Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
            L +D    +++ +GS   GQLG+ K+   S + PQ    L  I +  ++A G  S ALS
Sbjct: 142 ALSED---GRLFTWGSNSHGQLGLGKE-CPSQASPQRVQFLDGIPLTQVAAGGAHSFALS 197

Query: 252 AEGHLYTWG---RGFNSTSDVNCP---QSLPSS------LSFSQAALGWNHVLVLTGDGE 299
             G  + WG    G  +    N P    S P S      L     + G+ H  VLT  G+
Sbjct: 198 LSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGK 257

Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS---AVVTGK 354
           V   GG+ +G L          P     + V  +DG+ V QI  G+ H+      TGK
Sbjct: 258 VFTFGGNSYGQLGYSPTAGKEGP-----QLVEGIDGL-VSQIDCGSYHTLAYVYTTGK 309



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 16/188 (8%)

Query: 35  KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           +V++WGAG++GQLG G  ++  L P+ +   +   +  ++CG  H LAL+       G++
Sbjct: 95  RVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSE-----DGRL 149

Query: 94  FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
           F+WG  S GQLG G E      P+ V F DG    +T ++AG  HS  +S SG  F  G 
Sbjct: 150 FTWGSNSHGQLGLGKECPSQASPQRVQFLDG--IPLTQVAAGGAHSFALSLSGASFGWGS 207

Query: 153 GTFGQLGHGDYR----SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
            + GQL            S P  V +  N  V  I+CG  H+ VL +     +V+ FG  
Sbjct: 208 NSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQ---TGKVFTFGGN 264

Query: 209 KRGQLGVS 216
             GQLG S
Sbjct: 265 SYGQLGYS 272



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)

Query: 35  KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++WG+ + GQLG G+    + SPQ +       ++ +A GGAH  AL+     + G  
Sbjct: 148 RLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALS-----LSGAS 202

Query: 94  FSWGRGSSGQLG-HGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           F WG  S GQL    + V  +   KP +        + +IS G+ H+  ++ +G +FT G
Sbjct: 203 FGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFG 262

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
             ++GQLG+        P  V   ++  V QI CG  H+L  +      +V  FG G
Sbjct: 263 GNSYGQLGYSPTAGKEGPQLVEG-IDGLVSQIDCGSYHTLAYVYT--TGKVVSFGRG 316



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 16/126 (12%)

Query: 32  QVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIG 90
           Q  KV+++G  + GQLG      +  PQL+  +  L  VS + CG  H LA    +    
Sbjct: 254 QTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGL--VSQIDCGSYHTLAYVYTT---- 307

Query: 91  GKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
           GKV S+GRG   +    H E     +   ++  D   + + HI AG  H+ FV+      
Sbjct: 308 GKVVSFGRGPCCKSSPTHPEAPTENFTCLISADDLVDFEVKHIFAG-THANFVT------ 360

Query: 149 TCGDGT 154
           TC D +
Sbjct: 361 TCQDTS 366


>gi|410973279|ref|XP_003993081.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
           nucleotide exchange factor [Felis catus]
          Length = 462

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 176/443 (39%), Gaps = 73/443 (16%)

Query: 21  KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHV 79
           +P+  E   E  V+  ++WGA + GQLG G   D L PQ LN       V  +  GG H 
Sbjct: 4   EPRASEAAHEAAVL--FAWGANSYGQLGLGHKEDVLLPQQLNDFCKPECVRRITGGGGHS 61

Query: 80  LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
             +T       G +F  G    GQLG G   D LY        G    +  ++ GW+ + 
Sbjct: 62  AIVTDE-----GGLFVCGLNKDGQLGLGHTEDVLYFTTCRSLLG--CPVQQVACGWDFTI 114

Query: 140 FVSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
            ++++G + +CG  +FGQLG  HG  R      +    + + V  IA G+RH+L      
Sbjct: 115 ILTENGQVLSCGSNSFGQLGVPHGPRRCVVP--QAIELLKEKVVCIAAGLRHALAATASG 172

Query: 198 LGNQVYGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
           +  Q +G G   SG+R   G +     +   P    GL + +   + A  D SA+L+  G
Sbjct: 173 IVFQ-WGTGLASSGRRLCPGQTLPLFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAG 231

Query: 255 HLYTWGRGFNS-----TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGG 305
            LY WG   +       + +  PQ + +    ++       GW H++  T  G V   G 
Sbjct: 232 ELYVWGSNKHGQLASLAAFLPLPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGRVFTWGR 291

Query: 306 SHHGML-------------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           + +G L             S    +  + P       +  L G    +++ G+EH+  V 
Sbjct: 292 ADYGQLGRKLESREGWKLQSHDSSLPCSGPQKSMPSCLHCLTGAA--EVSCGSEHNLAVI 349

Query: 353 GKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
           G                               +WGW EHG  G G+  +   PK V    
Sbjct: 350 GG---------------------------TCYSWGWNEHGMCGDGSEANIWAPKPV---P 379

Query: 413 EFQNRDTQLEVFCGSGFTYAISR 435
             Q+    L V CG+G + A+ +
Sbjct: 380 SLQS-SLGLLVGCGAGHSLALCQ 401


>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
          Length = 1060

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 136/297 (45%), Gaps = 40/297 (13%)

Query: 36  VWSWGA--GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           V++WGA  GT     T  L +   P L N  S S ++ +ACG +H LA+T     I G +
Sbjct: 495 VYTWGANNGTGCNSTTEPLENYCEPILFNHFS-SKITKIACGSSHTLAVT-----INGLL 548

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV----------SD 143
           FSWG   SGQLGHG++   + P  V+  +       ++ AG ++SG +           +
Sbjct: 549 FSWGSNESGQLGHGDLRSRVVPDSVSNIE----NCINVFAGIDNSGCICSVSHENMMKDE 604

Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQV 202
            G L+  G  T G+LG G+  + +S V     VN   VH +A G  HSL L  D     +
Sbjct: 605 YGTLWVFGSSTCGKLGLGE--NMTSAVMTPREVNITGVHSVALGPMHSLALTSD---GTL 659

Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
           Y  G+G  G+LG + +   S +  QV     D + V + A    S A+S E  LY WG G
Sbjct: 660 YAAGAGSGGRLG-TGNTTNSFTFVQVKT---DHKFVAVGAGASHSLAISMENDLYGWGEG 715

Query: 263 FNSTSD--------VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
              T D        +N   S          A+  NH LVL+  G +   G + +G L
Sbjct: 716 KYLTFDEDVLEPTIINTIPSTTGQAKVVALAVAANHSLVLSQSGNLSGFGDNSYGQL 772



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 191/468 (40%), Gaps = 97/468 (20%)

Query: 14  SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML 72
           SA  + ++ K ++ ++    + V SWG      LG G  ++    P+++   S   V+ +
Sbjct: 36  SANSSRSRKKSDDGKQTASYLNVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQV 95

Query: 73  ACGGAH--VLALTSPSSVIGGKVFSWGRGSSGQLGH-----GEMVD-------------- 111
           +CG  H  VL  +S  ++  G VF++G G+SG+LG+      E++               
Sbjct: 96  SCGDYHSAVLVCSSRENINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWC 155

Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
              P+PV    G R  +  IS G NH+   +  G L+  G G  G LG+G   +   PVK
Sbjct: 156 TPVPQPVGMSIGLRNNVVTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVK 215

Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----------KRGQLGVSKDRI 220
           V    +  + + A G RHS+ L  D  GN ++ +G G           + G+LG+     
Sbjct: 216 VIFPQDTFISKCAAGARHSMAL--DIKGN-IWSWGYGGIVHSIFHIIHRNGRLGLGS--T 270

Query: 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-----FNSTSDVNCPQ 273
           RS   P +       E+  IS     SA L   G +YTWG  RG      N  SDV  P 
Sbjct: 271 RSCFTPNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPT 330

Query: 274 SLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGS------HHGMLS----DPERVSSTR 321
            + S   +   Q + G  + L L+  G++   G +        G++S     PE V+ T 
Sbjct: 331 IVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGSTLGFNKQTDGLISHTVYSPEPVAET- 389

Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
                        G K I + +G    A                        IN+  +  
Sbjct: 390 -------------GFKNIFVTSGPYSFAA-----------------------INIFGD-- 411

Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 429
            ++TWG G   +LG G++ D + PK V+        D  L+ +  + F
Sbjct: 412 -LLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAF 458



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 115/267 (43%), Gaps = 57/267 (21%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLL-------------------------------NLSSL 66
           +WG GT  +LG G   D + P+ +                               N    
Sbjct: 414 TWGLGTGYRLGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAFKVEDTVEKTVNPYDE 473

Query: 67  SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL--YPKPVTFFDGH 124
             +  +A G AH   LT       G V++WG  ++   G     + L  Y +P+  F+  
Sbjct: 474 RRIQQIAVGDAHGALLTC-----NGTVYTWG--ANNGTGCNSTTEPLENYCEPI-LFNHF 525

Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQ- 182
              IT I+ G +H+  V+ +G LF+ G    GQLGHGD RS   P  VS+  N  NV   
Sbjct: 526 SSKITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNIENCINVFAG 585

Query: 183 -----IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTI-GLHDI 235
                  C + H   ++KD  G  ++ FGS   G+LG+ ++   +V  P +V I G+H +
Sbjct: 586 IDNSGCICSVSHE-NMMKDEYGT-LWVFGSSTCGKLGLGENMTSAVMTPREVNITGVHSV 643

Query: 236 EIVGISANGDRSAALSAEGHLYTWGRG 262
            +  +      S AL+++G LY  G G
Sbjct: 644 ALGPM-----HSLALTSDGTLYAAGAG 665



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 91/415 (21%), Positives = 153/415 (36%), Gaps = 114/415 (27%)

Query: 36  VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV------ 88
           V++WG+   G+LG G  L D L P ++       +  ++CG  + LAL+S   +      
Sbjct: 306 VYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGST 365

Query: 89  ------------------------------------------IGGKVFSWGRGSSGQLGH 106
                                                     I G + +WG G+  +LGH
Sbjct: 366 LGFNKQTDGLISHTVYSPEPVAETGFKNIFVTSGPYSFAAINIFGDLLTWGLGTGYRLGH 425

Query: 107 GEMVDALYPKPVTFFDGHRYT-----------------------------ITHISAGWNH 137
           G+  D + PK V++     Y                              I  I+ G  H
Sbjct: 426 GDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAFKVEDTVEKTVNPYDERRIQQIAVGDAH 485

Query: 138 SGFVSDSGCLFTCG--DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
              ++ +G ++T G  +GT          ++  P+  + F +K + +IACG  H+L +  
Sbjct: 486 GALLTCNGTVYTWGANNGTGCNSTTEPLENYCEPILFNHFSSK-ITKIACGSSHTLAVTI 544

Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
           + L   ++ +GS + GQLG     +RS  +P     + +   + + A  D S  + +  H
Sbjct: 545 NGL---LFSWGSNESGQLG--HGDLRSRVVPDSVSNIEN--CINVFAGIDNSGCICSVSH 597

Query: 256 ----------LYTWGR--------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
                     L+ +G         G N TS V  P+ +  +      ALG  H L LT D
Sbjct: 598 ENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPREVNIT-GVHSVALGPMHSLALTSD 656

Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
           G +   G    G L      +S   + V  +        K + + AGA HS  ++
Sbjct: 657 GTLYAAGAGSGGRLGTGNTTNSFTFVQVKTDH-------KFVAVGAGASHSLAIS 704


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 10/228 (4%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
           ++++ G+ T GQLG G   D  +P+++ L   +  V  +A G ++VLA+T       G V
Sbjct: 236 QLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTD-----NGVV 290

Query: 94  FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           +S+G GS+  LGHGE  D   P+ +  F      + H+SAG  H+  +  SG +++ G G
Sbjct: 291 YSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKG 350

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
             G LGHGD    + P  V+   ++   Q     R + VL+ D     VYGFG    G L
Sbjct: 351 YCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDD---GSVYGFGCMGFGSL 407

Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
           G   +D    V  P+V   L    +  IS     +  ++ +G ++ +G
Sbjct: 408 GFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFG 455



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 147/335 (43%), Gaps = 33/335 (9%)

Query: 36  VWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
           V+S G+   G LG G    + ++   +   SL++V  ++    H   +        G+VF
Sbjct: 131 VYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHNHAAFVLQS-----GEVF 185

Query: 95  SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
           + G  SS   GH +    ++ P+ V        +   +S G N + F++  G L+TCG  
Sbjct: 186 TCGDNSSFCCGHKDTNRPIFRPRLVEALKA--VSCKQVSVGLNFTVFLTRQGQLYTCGSN 243

Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN--KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
           T GQLGHGD     +P K+   +     V QIA G  + L +  + +   VY FG G   
Sbjct: 244 THGQLGHGDTLDRPTP-KIIELLEGIGPVVQIAAGPSYVLAVTDNGV---VYSFGYGSNF 299

Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----- 266
            LG  +           T    DI +V +SA  + + AL + G +Y+WG+G+        
Sbjct: 300 CLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGD 359

Query: 267 -------SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
                  S VNC   L S L+  QA        VL  DG V   G    G L  P+R  +
Sbjct: 360 EIDKTLPSLVNC---LKSRLAV-QACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDIT 415

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
            + ++  +  + +L   +V QI+ G  H+ VVT +
Sbjct: 416 EKVMTPRV--LDSLRAHRVSQISTGLYHTVVVTNQ 448



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 60/192 (31%)

Query: 36  VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGKV 93
           V+S+G G++  LG G  HDE  P+ +       + ++  + G  H +AL S      G V
Sbjct: 290 VYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSS-----GFV 344

Query: 94  FSWGRGSSGQLGHGEMVDALYP-----------------KPVTFF---DGHRY------- 126
           +SWG+G  G LGHG+ +D   P                 K  TF    DG  Y       
Sbjct: 345 YSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGF 404

Query: 127 --------------------------TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
                                      ++ IS G  H+  V++ G +F  GD    QLGH
Sbjct: 405 GSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGH 464

Query: 161 GDYRSHSSPVKV 172
              R    P ++
Sbjct: 465 DTLRGCLQPTEI 476


>gi|145593744|ref|YP_001158041.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303081|gb|ABP53663.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 577

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 139/329 (42%), Gaps = 36/329 (10%)

Query: 38  SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
           +WG   +GQLG G      +P  ++L + + V  +A G  H LALTS      G V +WG
Sbjct: 112 AWGNNANGQLGDGTTTSSNTPVAVDLPAGTEVVAIAAGNDHSLALTST-----GAVLAWG 166

Query: 98  RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
             SSGQLG G   D     PVT       T T I+AG  HS  ++ +G  F  G+   GQ
Sbjct: 167 DNSSGQLGDGTNDD--RSTPVTVDLPTTSTTTAIAAGSVHSLSLTSTGSAFAWGNNDEGQ 224

Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
           LG     S + PV V+      +  IA G  HSL +  D   N    +GS  +GQLG   
Sbjct: 225 LGDESTTSTNKPVNVALTTGTTLTAIAGGSAHSLGITSD---NTAVAWGSNSQGQLG--- 278

Query: 218 DRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTW--------GRGFNSTSD 268
           D   + +L  V + L     +  I+A    S AL   G   TW        G G N TS+
Sbjct: 279 DGTNTNALAPVNVALTTGTTVTAIAAGLLHSVALLTNGTAATWGNNATGQLGNGNNVTSN 338

Query: 269 VNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--------SS 319
                SLPS  + +  AA   NH + +T     L  G +  G L              SS
Sbjct: 339 TPVEVSLPSGTTLTAIAANSSNHTVAITNTETALAWGDNSFGQLGTEVTTSGDVSIASSS 398

Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
             P++V L       G  +   A G  HS
Sbjct: 399 NTPVAVNLST-----GTTLTNTAVGTNHS 422



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 133/334 (39%), Gaps = 48/334 (14%)

Query: 86  SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
           ++ +     +WG+   GQLG+G   ++  P  V+   G    +T I+ G  HS  ++ +G
Sbjct: 51  TAAVTDTALTWGQNDRGQLGNGTTTNSTDPVEVSLPAGTL--LTDIAGGGKHSLALTSTG 108

Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
            L   G+   GQLG G   S ++PV V       V  IA G  HSL L        V  +
Sbjct: 109 SLLAWGNNANGQLGDGTTTSSNTPVAVDLPAGTEVVAIAAGNDHSLALTST---GAVLAW 165

Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWGR--- 261
           G    GQLG   +  RS     VT+ L         A G   S +L++ G  + WG    
Sbjct: 166 GDNSSGQLGDGTNDDRST---PVTVDLPTTSTTTAIAAGSVHSLSLTSTGSAFAWGNNDE 222

Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
              G  ST+  N P ++  +   +  A+  G  H L +T D   +  G +  G L D   
Sbjct: 223 GQLGDESTTSTNKPVNVALTTGTTLTAIAGGSAHSLGITSDNTAVAWGSNSQGQLGDGTN 282

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
            ++  P++VAL       G  V  IAAG  HS         V L                
Sbjct: 283 TNALAPVNVALTT-----GTTVTAIAAGLLHS---------VALLT-------------- 314

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
              N    TWG    GQLG GN      P  V+L
Sbjct: 315 ---NGTAATWGNNATGQLGNGNNVTSNTPVEVSL 345



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 118/281 (41%), Gaps = 37/281 (13%)

Query: 35  KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
            V +WG  + GQLG G   D  +P  ++L + S+ + +A G  H L+LTS      G  F
Sbjct: 161 AVLAWGDNSSGQLGDGTNDDRSTPVTVDLPTTSTTTAIAAGSVHSLSLTST-----GSAF 215

Query: 95  SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
           +WG    GQLG          KPV        T+T I+ G  HS  ++        G  +
Sbjct: 216 AWGNNDEGQLGDESTTS--TNKPVNVALTTGTTLTAIAGGSAHSLGITSDNTAVAWGSNS 273

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
            GQLG G   +  +PV V+      V  IA G+ HS+ LL +        +G+   GQLG
Sbjct: 274 QGQLGDGTNTNALAPVNVALTTGTTVTAIAAGLLHSVALLTN---GTAATWGNNATGQLG 330

Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISAN-GDRSAALSAEGHLYTWGRG------- 262
               V+ +    VSLP  T       +  I+AN  + + A++       WG         
Sbjct: 331 NGNNVTSNTPVEVSLPSGTT------LTAIAANSSNHTVAITNTETALAWGDNSFGQLGT 384

Query: 263 ---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
                      S+S+     +L +  + +  A+G NH L L
Sbjct: 385 EVTTSGDVSIASSSNTPVAVNLSTGTTLTNTAVGTNHSLAL 425


>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 113/267 (42%), Gaps = 38/267 (14%)

Query: 58  PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PK 116
           P L++L+    +  +A GG H LAL+       G+V+ WG G  GQLG G  V  +  P 
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDI-----GQVWGWGYGGEGQLGLGSRVRLVSSPH 279

Query: 117 PVTFFDGHRY----------------------TITHISAGWNHSGFVSDSGCLFTCGDGT 154
           P+   +   Y                       +  I+ G  HS  ++D+G L T G G 
Sbjct: 280 PIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGL 339

Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
           +GQ G G      SP  VSS +   + ++A G+ H+     D     VY FG  + GQLG
Sbjct: 340 YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSD---GDVYAFGGNQFGQLG 396

Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
              D+  ++        L ++ +  IS     +A ++ EG ++ WG       G     D
Sbjct: 397 TGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVID 456

Query: 269 VNCPQSLPSSLSFSQ-AALGWNHVLVL 294
            N P  +     F +  A GW H L+L
Sbjct: 457 RNAPAEVRIKDCFPKNIACGWWHTLLL 483



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 37/208 (17%)

Query: 35  KVWSWGAGTDGQLGTG-RLHDELSPQLL----------------NLSSL--------SSV 69
           +VW WG G +GQLG G R+    SP  +                N+SS+        S V
Sbjct: 254 QVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYV 313

Query: 70  SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
             +ACGG H   +T       G + ++G G  GQ G G   D L P  V+   G R  I 
Sbjct: 314 KKIACGGRHSAVITDT-----GALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIR--IE 366

Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP--VKVSSFVNKNVHQIACGM 187
            ++AG  H+   S  G ++  G   FGQLG G  ++ + P  ++  +  N NV  I+CG 
Sbjct: 367 EVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGA 426

Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
           RH+ V+  +    +V+ +G  K GQLG+
Sbjct: 427 RHTAVITDE---GRVFCWGWNKYGQLGI 451



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 112/278 (40%), Gaps = 65/278 (23%)

Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ- 227
           P  VS      +  +A G RH+L L       QV+G+G G  GQLG+   R+R VS P  
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLALSDI---GQVWGWGYGGEGQLGLGS-RVRLVSSPHP 280

Query: 228 ------------VTIGLHDIEIV-----------GISANGDRSAALSAEGHLYTWGRGF- 263
                        + G++   +V            I+  G  SA ++  G L T+G G  
Sbjct: 281 IPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLY 340

Query: 264 -----NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
                 ST D   P  + S L     + A G  H    + DG+V   GG+  G L     
Sbjct: 341 GQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCD 400

Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINV 376
            + T P    L +  NL+ V V  I+ GA H+AV+T                        
Sbjct: 401 QAETLP---KLLEAPNLENVNVKTISCGARHTAVIT------------------------ 433

Query: 377 IAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 414
             E R +  WGW ++GQLG+G+  D+  P  V + D F
Sbjct: 434 -DEGR-VFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCF 469


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 163/408 (39%), Gaps = 90/408 (22%)

Query: 27  EEEEQQVVKVWSWGAGTDGQLGTGR-------------LHDELSPQ-------------- 59
           E + +Q   + SWG G +GQLG G              L DE   Q              
Sbjct: 90  ECDAKQQKLLLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQ 149

Query: 60  -------------LLNLSSLSSVSML----------------ACGGAHVLALTSPSSVIG 90
                        L    SLS  + L                ACG  H+  +T       
Sbjct: 150 GQIYTWGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKD----- 204

Query: 91  GKVFSWGRGSSGQLGHGEMVD------ALYPKPVTFFDGHRYT--------ITHISAGWN 136
           GK+ +WG    G+LGH   +       +  P+    ++   +         I   S G+ 
Sbjct: 205 GKLITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQ 264

Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
           H+  ++  G ++T G G  G LGHG++     P KV      N+ +I CGM ++  L KD
Sbjct: 265 HTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGL--SNIVKIDCGMDYTFALDKD 322

Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGH 255
             GN +Y +GS + GQLG ++  I   ++P Q+ +      +V IS   + SA L+ +G 
Sbjct: 323 --GN-IYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGE 379

Query: 256 LYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
            + WG G +        +++N P+ L  +    +   G  H  V+T  G++ + G    G
Sbjct: 380 AFIWGYGNDGQLGHKEKTNLNQPKKLEFTEPLRRVVCGGGHTGVITTAGKLFLFGRGRDG 439

Query: 310 MLSDPERVSSTRPLSVALEKVSNLD---GVKVIQIAAGAEHSAVVTGK 354
            L   +   S     +  ++V N+      +V++IA G+ H   +  K
Sbjct: 440 QLGRGDVNESMAAFRIEPKEVVNISQTLKAEVLEIALGSNHCLAIAAK 487



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 55/253 (21%)

Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG 262
           +G+G+ GQLG   + + S+S+P     L D +I+ ++A+GD SAA++++G +YTWG  RG
Sbjct: 102 WGNGQNGQLGNGNETL-SLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRG 160

Query: 263 FNSTSDVNCPQS----LPS-----SLSFSQAALGWNHVLVLTGDGEVLMLGG------SH 307
            + +   +  ++    LP+      + F Q A G  H+  +T DG+++  G        H
Sbjct: 161 GSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGH 220

Query: 308 HGMLSDPERVSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
           +  L    +  S  P S A     N     L+  K+IQ + G +H+A +T          
Sbjct: 221 NAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLT---------- 270

Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
                           ++  + TWG+G++G LG GN  DQ     V+L  + +     ++
Sbjct: 271 ----------------QDGEVYTWGFGKNGALGHGN-WDQ-----VDLPKKVEGLSNIVK 308

Query: 423 VFCGSGFTYAISR 435
           + CG  +T+A+ +
Sbjct: 309 IDCGMDYTFALDK 321



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 145/368 (39%), Gaps = 67/368 (18%)

Query: 93  VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
           + SWG G +GQLG+G E +    P PV         I  ++A  + S  V+  G ++T G
Sbjct: 99  LLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDE--DIIQVNASGDISAAVTSQGQIYTWG 156

Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFV---NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
               G L      S ++ + + + +        Q+ACG  H   + KD    ++  +G+ 
Sbjct: 157 KTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKD---GKLITWGNP 213

Query: 209 KRGQLG-------VSKDRIRSV-------SLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
            +G+LG        SK++  S        ++  V   L   +I+  S     +A L+ +G
Sbjct: 214 DQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDG 273

Query: 255 HLYTWGRGFNST------SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
            +YTWG G N          V+ P+ +    +  +   G ++   L  DG +   G + +
Sbjct: 274 EVYTWGFGKNGALGHGNWDQVDLPKKVEGLSNIVKIDCGMDYTFALDKDGNIYSWGSNRY 333

Query: 309 GMLSDPERVSSTR--PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
           G L   +   +    P+ + L   S+     V+ I+ G EHSA                 
Sbjct: 334 GQLGTTQSNINKHNVPIQLQLPHGSS----HVVDISCGEEHSA----------------- 372

Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 426
                 F+N   E      WG+G  GQLG     +   PK +   +  +       V CG
Sbjct: 373 ------FLNDKGE---AFIWGYGNDGQLGHKEKTNLNQPKKLEFTEPLR------RVVCG 417

Query: 427 SGFTYAIS 434
            G T  I+
Sbjct: 418 GGHTGVIT 425


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.135    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,485,926,396
Number of Sequences: 23463169
Number of extensions: 333987137
Number of successful extensions: 876263
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2693
Number of HSP's successfully gapped in prelim test: 2688
Number of HSP's that attempted gapping in prelim test: 768744
Number of HSP's gapped (non-prelim): 37057
length of query: 442
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 296
effective length of database: 8,933,572,693
effective search space: 2644337517128
effective search space used: 2644337517128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)