BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013470
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 28/329 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
+KVS LDG+ + QI+AG HS T
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 170/373 (45%), Gaps = 53/373 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4292
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G V Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4347
Query: 341 IAAGAEHSAVVTG 353
I+AG HSA T
Sbjct: 4348 ISAGRCHSAAWTA 4360
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 56/385 (14%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIM 384
+++ L GV + +A GAEH+ +A N +
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLA--------------------------LASNGDVY 4313
Query: 385 TWGWGEHGQLGLGNTCDQIHPKVVN 409
WG GQLGLG+T P +V
Sbjct: 4314 AWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 55/357 (15%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK---FHWVRLFII----SYTPFFPP 371
+ + L G+ + ++ AG++ S +T + W + S P
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656
Query: 372 FFINVIAENR------------------AIMTWGWGEHGQLGLGNTCDQI-HPKVVN 409
I +A R + WG GQ G GN+ I PK V+
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVS 713
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 39/306 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + P+L+ V + ++ G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD P + + + ++ G + SL L QVY +G G
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NS 265
LG ++ P++ L IV +S ALS + +Y WG NS
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNS 702
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
T + P+ + ++ Q + G +H L T + D + V+ RP
Sbjct: 703 TGPITKPKKVSGLDGIAIQQISAGTSHSLAWT-------------ALPRDRQVVAWHRPY 749
Query: 324 SVALEK 329
V LE+
Sbjct: 750 CVDLEE 755
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 101/356 (28%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
P E+V+ L+G ++ Q+A G H+ V+ A+
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVS-------------------------AD 4204
Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
+ +G G++G+LGLGN+ + P+ +++ + +V CG+ F+ A+++
Sbjct: 4205 GSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 49/281 (17%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
VS++ ++ G + QL G P SF + I G + V+ D
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
V G G G+LG+ +S +L ++T H I+ V S D + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+WG G ++S P+ + L + G+ H +T DGE+ G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
G L + S++R + ++ +SN V +++ G+ H+
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHT-------------------- 573
Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 409
I + + R + ++G G++G+LG G+T PKV+
Sbjct: 574 -----IALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIE 609
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 161/379 (42%), Gaps = 46/379 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWG 389
D KV+Q++ G H+ VT E + WG G
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVT--------------------------ERNNVFAWGRG 355
Query: 390 EHGQLGLGNTCDQIHPKVV 408
+GQLG+G + D+ PK++
Sbjct: 356 TNGQLGIGESVDRNFPKII 374
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 170/379 (44%), Gaps = 60/379 (15%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 17 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 69
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + + +V +G + GQLG+ ++D + +PQ I I ++A +
Sbjct: 130 SHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIRIKMVAAGAE 182
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGD 297
+AA++ +G LY WG G +D P+ + S+ S A GW H + ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 242
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHW 357
G + G S +G L + P K+ L + QI+ G H+ +T
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALT----- 292
Query: 358 VRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 417
+ + WGW + GQ+G+GN DQ P V F +
Sbjct: 293 ---------------------SDGKLYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDD 327
Query: 418 DTQLEVFCGSGFTYAISRH 436
++V CG T A++
Sbjct: 328 QKVVQVSCGWRHTLAVTER 346
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 195 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
V + + S QV D ++V +S + A++ +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 84 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 196
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369
Query: 321 RP 322
P
Sbjct: 370 FP 371
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 99/269 (36%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS------------ 277
+++ ISA S AL + + +WGRG + D P L +
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 278 ---SLSFSQAAL-----GW-----------------------------------NHVLVL 294
++++SQ+ + GW +H L +
Sbjct: 76 ADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAV 135
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+A VT
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKMVAAGAEHTAAVT-- 188
Query: 355 FHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDE 413
E+ + WGWG +G LGLG+ D++ P +V + G E
Sbjct: 189 ------------------------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE 224
Query: 414 FQN------RDTQLEVFCGSGFTYAISRH 436
+ R T + G+ +TY S++
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYGWSKY 253
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 151/326 (46%), Gaps = 29/326 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT-----LDGK 3093
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3151
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3208
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
G+LG + P L I +V I S AL+ G ++TWG+ G
Sbjct: 3209 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Query: 265 STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
V PQ + A+G H L +T G+V G + HG + +P
Sbjct: 3267 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3326
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
AL V LD V V ++A G+ HS
Sbjct: 3327 ---AL--VIGLDAVFVNRVACGSSHS 3347
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + SV+ +ACG AH A+T+ G V
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4210
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4211 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4327
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
S D +R P+ L +I+ I+ A S G +YTWG G + +
Sbjct: 4328 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 4384
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ P+ + AAL H++ +T G +H LS + RPL
Sbjct: 4385 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 4425
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 27/304 (8%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G ++ I+ G
Sbjct: 4144 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4196
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + +V + S AL+
Sbjct: 4257 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4311
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIIS 364
+ G L D + RP VA L G ++++ G+ H+ ++ RL +
Sbjct: 4372 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQLSERLRPLP 4426
Query: 365 YTPF 368
P
Sbjct: 4427 NPPL 4430
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 13/242 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+SWG G D +LG G H P + V + CG ++ A+T GG + +
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLT 691
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG+ +LGHG D P V H + +G HS ++ G +F GDG +
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG+G+ P+ V S V ++ G + S+ L + Q+Y +G +
Sbjct: 752 GKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSE---GQLYTWGKATCLGHQL 806
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
+ ++ S+P++ L IV ++ + ALS+ G ++ WGR N + + CP S+
Sbjct: 807 VERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASV 863
Query: 276 PS 277
S
Sbjct: 864 SS 865
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 145/354 (40%), Gaps = 54/354 (15%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKV++ G G++G+LG G + P + + + +G H+ ++ G +F+
Sbjct: 3038 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+G G+LGHG+ + P V + K + +ACG HS + ++Y +G G+
Sbjct: 3098 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGLGEY 3154
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG------- 260
G+LG + + P++ L +V + A G R A AL+ +G +++WG
Sbjct: 3155 GRLGHGDNTTQLK--PKLVTALAGRRVVQV-ACGSRDAQTLALTEDGAVFSWGDGDFGKL 3211
Query: 261 -RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
RG + SD S + Q G L LT GEV G + L
Sbjct: 3212 GRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
+P + + L G +VI +A GA H VT +
Sbjct: 3272 RKP-----QPIGGLRGRRVIHVAVGALHCLAVT--------------------------D 3300
Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 432
+ WG +HGQ G GNT P V+ L F NR V CGS + A
Sbjct: 3301 AGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNR-----VACGSSHSIA 3349
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G +P + S V + CG LALT G+V++
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR-----AGEVWT 3254
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+P+ G R + H++ G H V+D+G ++ GD
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRR--VIHVAVGALHCLAVTDAGQVYAWGDNDH 3312
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
GQ G G+ + P V V+++ACG HS+
Sbjct: 3313 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 163/409 (39%), Gaps = 55/409 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4105
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V +V IACG HS + V +G G+ G+L
Sbjct: 4166 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4223 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4280
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4281 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4337
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMT 385
+KV+ L G K+I IA TG H V +++ + T
Sbjct: 4338 --KKVAALQGKKIISIA---------TGSLHCV-----------------ACSDSGEVYT 4369
Query: 386 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
WG + GQLG G P++V Q + ++V CGS T A+S
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 4414
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 93/238 (39%), Gaps = 51/238 (21%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S +S +G +Y
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 3043
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
L R + +P V L K+ +A G+ HSA ++ +
Sbjct: 3104 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGE------------- 3145
Query: 370 PPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 427
+ TWG GE+G+LG G+ Q+ PK+V R ++V CGS
Sbjct: 3146 -------------LYTWGLGEYGRLGHGDNTTQLKPKLVT---ALAGRRV-VQVACGS 3186
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G+LG G + L P L+ SL V + G +AL+S G++++
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRVFAGSQFSVALSSE-----GQLYT 795
Query: 96 WGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + LGH + ++ P+ V+ R I ++ H +S SG +F G
Sbjct: 796 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKR--IVDVAVSVAHCLALSSSGEVFGWG 851
Query: 152 DGTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLV 192
Q+ S +P+ V S IAC SLV
Sbjct: 852 RNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLV 894
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 383 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 434
+ WG G++G+LG GN + P +V Q VF GS F+ A+S
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQR------VFAGSQFSVALS 788
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
+P V L+G K+ ++A G+ HS V T H LF + P
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3348
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 767
Query: 342 AAGAEHSAVVTGKFHW 357
A G S + W
Sbjct: 768 ACGPAQSFAWSSCSEW 783
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + A G H + T DGEV G
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G L D + RP VA L G KV ++A G+ H+
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4315
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G P ++ + V + CG +ALT G V++
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4222
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+ V G + + I+ G H ++ G ++T GD
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4280
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG G + P V++ K V+++ACG H+L
Sbjct: 4281 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 264 -NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ L +L + G L LT D V G +G L
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
P+ K+ +L G+ V+++ G++ S +T GK + RL S
Sbjct: 4186 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240
Query: 370 PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
P + VIA E+ + TWG + GQLG G T P++V L
Sbjct: 4241 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4300
Query: 411 GDEFQNRDTQLEVFCGSGFTYAIS 434
+ NR V CGS T A S
Sbjct: 4301 QGKKVNR-----VACGSAHTLAWS 4319
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 64/296 (21%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
P+ VA L G+KVI +A G+ + + + E
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTL------------------------AVTE 623
Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
N + +WG G++G+LG G + PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
G L R++ +P + L ++ IA G+ HSA +T
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3117
Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
+ + TWG GE+G+LG G+ Q+ PK+V LG ++V
Sbjct: 3118 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3158
Query: 425 CGS 427
CGS
Sbjct: 3159 CGS 3161
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 52/258 (20%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEH 391
+LD VI++ G++ S +T ++ + +WG G++
Sbjct: 657 DLD---VIKVRCGSQFSIALT--------------------------KDGQVYSWGKGDN 687
Query: 392 GQLGLGNTCDQIHPKVVN 409
+LG G +PK++
Sbjct: 688 QRLGHGTEEHVRYPKLLE 705
Score = 39.7 bits (91), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 164/354 (46%), Gaps = 38/354 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSA------VVTGKFHWVRLFIISYTPF 368
+P V L+G K+ ++A G+ HS V T H LF + P
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPL 3347
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 146/316 (46%), Gaps = 25/316 (7%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHSAVVTGKFHW 357
A G S + W
Sbjct: 767 ACGPAQSFAWSSCSEW 782
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + A G H + T DGEV G
Sbjct: 4215 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G L D + RP VA L G KV ++A G+ H+
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4313
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G P ++ + V + CG +ALT G V++
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4220
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+ V G + + I+ G H ++ G ++T GD
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4278
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG G + P V++ K V+++ACG H+L
Sbjct: 4279 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 156/384 (40%), Gaps = 58/384 (15%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 264 -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ L +L + G L LT D V G +G L
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--------GKFHWVRLFIISYTPFF 369
P+ K+ +L G+ V+++ G++ S +T GK + RL S
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238
Query: 370 PPFFI------NVIA------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NL 410
P + VIA E+ + TWG + GQLG G T P++V L
Sbjct: 4239 RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298
Query: 411 GDEFQNRDTQLEVFCGSGFTYAIS 434
+ NR V CGS T A S
Sbjct: 4299 QGKKVNR-----VACGSAHTLAWS 4317
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 64/296 (21%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
P+ VA L G+KVI +A G+ + + + E
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLA------------------------VTE 622
Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
N + +WG G++G+LG G + PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 52/243 (21%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYT 366
G L R++ +P + L ++ IA G+ HSA +T
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTS------------- 3116
Query: 367 PFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVF 424
+ + TWG GE+G+LG G+ Q+ PK+V LG ++V
Sbjct: 3117 -------------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVA 3157
Query: 425 CGS 427
CGS
Sbjct: 3158 CGS 3160
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
KV L G V Q+A G +H++ F P + I ++G
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSA-----------------FVP--------SSGRIYSFG 320
Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
G +GQLG G+T ++ P V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 141/328 (42%), Gaps = 52/328 (15%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ + +P+ L DI+IV ++ S ALS ++ WG+ G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 173 IDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
P + +L K++ I G +H+A +T +
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260
Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
+ T+G G +GQLG +T +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 25/301 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G GQLG + + P+ + ++ +ACG AH LAL G+V++
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDK-----GQVYA 107
Query: 96 WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQLG G P+ + + I ++ G+ HS +S + +F G
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG G D + +SP + S + Q+A G HS VL L ++G+G K GQL
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G++ + R V P + L +IV I D +AAL+ EG ++T+G G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P+ + + +Q A G H + G + G +G L + P +
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 325 V 325
V
Sbjct: 341 V 341
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
KV L G V QIA G +H++ F P + I ++G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA-----------------FVP--------SSGRIYSFG 320
Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
G +GQLG G+T ++ P V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 52/328 (15%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ + +P+ L DI+IV ++ S ALS ++ WG+ G
Sbjct: 114 GQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 173 IECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
P + +L K++ I G +H+A +T +
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------KE 260
Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
+ T+G G +GQLG +T +I+P+ V
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 25/301 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G GQLG + + P+ + ++ ++CG AH LAL G+V++
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107
Query: 96 WGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQLG G P+ + + I ++ G+ HS +S + +F G
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG G + + +SP + S + Q+A G HS VL L ++G+G K GQL
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G++ + R V P + L +IV I D +AAL+ EG ++T+G G NSTS
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 268 DVNCPQSLPSSLS--FSQAALGWNHV-LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P+ + + +Q A G H + G + G +G L + P +
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 325 V 325
V
Sbjct: 341 V 341
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 159/382 (41%), Gaps = 54/382 (14%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
KV L G V +IA G +H++ F P + I ++G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSA-----------------FVP--------SSGRIYSFG 320
Query: 388 WGEHGQLGLGNTCDQIHPKVVN 409
G +GQLG G+T ++ P V
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 142/329 (43%), Gaps = 54/329 (16%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAE 379
P + +L K++ I G +H+A +T +
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALT--------------------------K 259
Query: 380 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
+ T+G G +GQLG +T +I+P+ V
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 16/229 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G GQLG + + P+ + ++ ++CG AH LAL G+V++
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDK-----GQVYA 107
Query: 96 WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQLG G P+ + + I ++ G+ HS +S + +F G
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQ--IVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG G D + +SP + S + Q+A G HS VL L ++G+G K GQL
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL---TLSGAIFGWGRNKFGQL 222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G++ + R V P + L +IV I D +AAL+ EG ++T+G G
Sbjct: 223 GLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAG 269
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 53 HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
+D S + L S+ + + CG H LAL+ GG++F+WG+ GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ V G + ISAG HS +S SG +++ G GQLG G S
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
P + N+ V +ACG HS +L +D L ++ FG+GK GQLG +++ +R +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
++ +G +I A +S G ++++G G + T D P LP +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+ +H T + E++M+ G + +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 44/242 (18%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307
Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
+ +++ + ++G G+ GQLG G T DQ+ P V
Sbjct: 308 -------------------------LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
Query: 409 NL 410
+
Sbjct: 343 KV 344
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 182/447 (40%), Gaps = 79/447 (17%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHV 79
+P+ E +++WGA + GQLG G D LS Q L + + + GG H
Sbjct: 2 EPEPHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHS 61
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T G +F G GQLG G + LY P G I ++ GW+ +
Sbjct: 62 AVVTDE-----GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLG--CAIQQVACGWDFTI 114
Query: 140 FVSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
++++G + +CG +FGQLG HG R + + + V IA G+RH+L
Sbjct: 115 ILTENGQVLSCGSNSFGQLGVPHGPRRCVIP--QAIELLREKVVSIAAGLRHALAATAS- 171
Query: 198 LGNQVYGFG-----SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
V+ +G SG+R G + + P GL + + V + A D SA+L+
Sbjct: 172 --GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTD 229
Query: 253 EGHLYTWGRG-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHVLVLTGDGEVLML 303
G LY WG + + + PQ + + ++ AA+ GW H++ T G+V
Sbjct: 230 AGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDG--------------VKVIQIAAGAEHS- 348
G + +G L R TR + ++ +L G +I+ G+EH+
Sbjct: 290 GRADYGQLG---RTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNL 346
Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
AV+ G H +WGW EHG G G D PK V
Sbjct: 347 AVIGGVCH----------------------------SWGWNEHGMCGDGTEADVWAPKPV 378
Query: 409 NLGDEFQNRDTQLEVFCGSGFTYAISR 435
F L V CG+G + A+ +
Sbjct: 379 PGLRFFLG----LHVGCGAGHSLALCQ 401
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 158/359 (44%), Gaps = 58/359 (16%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAEN 380
P V L + KV+ I+ G EH+AV+T ++
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLT--------------------------KS 260
Query: 381 RAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 433
+ T+G G GQLG + D+++P+ V +G E R L SG YA
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 151/362 (41%), Gaps = 54/362 (14%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D C L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
+ +++ P + I +G G GQLG G+TC+ P
Sbjct: 306 T--------------LAFVP-----------SSGLIYAFGCGARGQLGTGHTCNVKCPSP 340
Query: 408 VN 409
V
Sbjct: 341 VK 342
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++ G T GQLG R ++ P+ + + + +ACG +H LAL+ G++F
Sbjct: 54 EVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGESHSLALSD-----RGQLF 106
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG GS GQLG D++ P ++ TI +S G H ++ G FT G +
Sbjct: 107 SWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS 165
Query: 155 FGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G ++ S +SP +V S + Q+A G HS L L V+G+G GQL
Sbjct: 166 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAGQL 222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G+S ++ R P L ++V IS + +A L+ G ++T+G G +S +
Sbjct: 223 GLSDEKDRES--PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN 280
Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
D P+ + + +Q A G H L G + G G L
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 78 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307
Query: 335 GVKVIQIAA 343
++I+IAA
Sbjct: 308 -DRIIEIAA 315
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 40/309 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 78 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307
Query: 335 GVKVIQIAA 343
++I+IAA
Sbjct: 308 -DRIIEIAA 315
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+S G + GQLG R P+ + + V +++CG H +A+ GKVF
Sbjct: 42 RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCH-----KGKVF 96
Query: 95 SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG GS GQLG GE + + P + G + I +S G HS +S+ G +F+ G
Sbjct: 97 AWGAGSEGQLGIGEFKEISFMPTKIKALAGIK--IIQVSCGHYHSLALSEDGHVFSWGRN 154
Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G + RS + P KV S + Q+A G HS L L +G+GS + GQ
Sbjct: 155 SEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---SLTGTSFGWGSNRSGQ 211
Query: 213 LGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
L +S ++++ + P L ++ ++ IS + +A L+ EG ++T+G
Sbjct: 212 LALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 260
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 25/235 (10%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G +HS + + +++CGD ++GQLG +S P + + + +V ++CG HS+
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAAL 250
+ C +V+ +G+G GQLG+ + + +S +P L I+I+ +S S AL
Sbjct: 88 AV---CHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHYHSLAL 142
Query: 251 SAEGHLYTWGR--------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEV 300
S +GH+++WGR G NS S PQ + S + +Q A G H L+ G
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTS 201
Query: 301 LMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G + G L+ + + +P S+ L + VI I+ G EH+AV+T
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIG-----ALKNLSVIYISCGYEHTAVLT 251
Score = 39.3 bits (90), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 79/229 (34%), Gaps = 80/229 (34%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
Q A G HSL+L + ++VY G GQLG +D+ S P+ L+D+ + +S
Sbjct: 26 QAASGEHHSLLLFSN---HRVYSCGDNSWGQLGQRRDQ--STERPEPIQALNDLHVDLVS 80
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
G H + + G+V
Sbjct: 81 C--------------------------------------------GKEHSVAVCHKGKVF 96
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
G G L + + +S K+ L G+K+IQ++ G HS
Sbjct: 97 AWGAGSEGQLG----IGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLA----------- 141
Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVN 409
++E+ + +WG GQLGLG N+ Q P+ V
Sbjct: 142 ---------------LSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK 175
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ ++ I+ G S V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMS-IACGQMCSMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P +V++ V ++ACG H+LVL + Q+Y +G+ GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA S GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKSQGGHVYMWGQ 336
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 44/316 (13%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G SG
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
LG G++ + P+ + G + I +S G H + G +FT G + QLG+G
Sbjct: 78 LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135
Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 192
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
+ +VT L + ++ I+ S A+ G +Y WG G + C
Sbjct: 193 PIP-RRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + + A G+ H LVLT +G++ G + +G L + + + P V +EK
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 307
Query: 334 DGVKVIQIAAGAEHSA 349
++I+IAA HSA
Sbjct: 308 --DRIIEIAAC--HSA 319
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F G G LG GD +S P ++ S K + ++ G +VL +V+ +G
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 124
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
QLG V ++ L + +++ ++ S L+++G ++ WG
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G ST++ P+ + L A G + + GEV + G + +G L
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 243
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
+ P +V+ L G++V ++A G H+ V+T
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273
Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
+ I WG +GQLG GN +Q +P V
Sbjct: 274 -DEGQIYAWGANSYGQLGTGNKSNQSYPTPV 303
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTSD-----GE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ + +I+ G S V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNIACGQMCSMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P +V++ V ++ACG H+LVL + Q+Y +G+ GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 336
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 136/316 (43%), Gaps = 44/316 (13%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G SG
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
LG G++ + P+ + G + I +S G H + G +FT G + QLG+G
Sbjct: 78 LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135
Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 192
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
+ +VT L + ++ I+ S A+ G +Y WG G + C
Sbjct: 193 PIP-RRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + + A G+ H LVLT +G++ G + +G L + + + P V +EK
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 307
Query: 334 DGVKVIQIAAGAEHSA 349
++I+IAA HSA
Sbjct: 308 --DRIIEIAAC--HSA 319
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 43/271 (15%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F G G LG GD +S P ++ S K + ++ G +VL +V+ +G
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 124
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
QLG V ++ L + +++ ++ S L+++G ++ WG
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G ST++ P+ + L A G + + GEV + G + +G L
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 243
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVI 377
+ P +V+ L G++V ++A G H+ V+T
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLT------------------------- 273
Query: 378 AENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
+ I WG +GQLG GN +Q +P V
Sbjct: 274 -DEGQIYAWGANSYGQLGTGNKSNQSYPTPV 303
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 139/313 (44%), Gaps = 48/313 (15%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFII 363
G +G L P ++ + ++ KVIQ+A G EH+ V+T
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLT----------- 259
Query: 364 SYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQL 421
EN A+ T+G G+ GQLGLG + PKV+ N+ D+ T
Sbjct: 260 ---------------EN-AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ-----TIS 298
Query: 422 EVFCGSGFTYAIS 434
+ CG T I+
Sbjct: 299 YISCGENHTALIT 311
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLF 281
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
TS+ +++ + S + G NH ++T G + G HG L
Sbjct: 282 ETSEPKVIENI-RDQTISYISCGENHTALITDIGLMYTFGDGRHGKL 327
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT +
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTENA------ 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 62/232 (26%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++ G +GQLG G + + +++ +S + L+ G ALT G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTE-----DGRLF 162
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQ+G + + P+ VT ++ IS G+ HS FV+ G L+ G+
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPE 218
Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD---------------- 196
G+LG + +H +P VS K V Q+ACG H++VL ++
Sbjct: 219 NGKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTENAVYTFGLGQFGQLGLG 277
Query: 197 ------------------------CLGNQ---------VYGFGSGKRGQLGV 215
C N +Y FG G+ G+LG+
Sbjct: 278 TFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGL 329
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 148/347 (42%), Gaps = 45/347 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ S ++ + ACG H LALT G VF
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 222
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 223 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCPE 280
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH +Y P +V+ F+ K V +ACG H+
Sbjct: 281 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 340
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I A S
Sbjct: 341 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCS 394
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ A G + ++V + +
Sbjct: 395 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 454
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G L + + S A ++V LDG+ Q+A G HS V+
Sbjct: 455 PTFGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIA 498
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 154/379 (40%), Gaps = 63/379 (16%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ P+ + I + G N
Sbjct: 158 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE--AIVLAACGRN 210
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ ++D+G +F G+ GQLG G+ SP ++ + + + ++ACG S+++
Sbjct: 211 HTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLM-- 267
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
DC GN +Y FG + GQLG + D ++ +D E+V R A+ E
Sbjct: 268 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 315
Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
T D Q LP ++ A G NH LVL V G +G L
Sbjct: 316 ---------KTKDG---QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 363
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
E+ P V K+ + G QI AG S V+ G F W + +P
Sbjct: 364 EQKDEMVPRLV---KLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 420
Query: 372 FFIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDEF 414
+ ++A + + ++WG G+LG G+ PK E
Sbjct: 421 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 476
Query: 415 QNRDTQLEVFCGSGFTYAI 433
+ D G+++++
Sbjct: 477 KTLDGIFSEQVAMGYSHSL 495
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 68/303 (22%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + + ++ + ACG H+L L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V+ FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 219 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ + Q LG N DG+ + + D E
Sbjct: 274 YSFG----------CPE-------YGQ--LGHNS------DGKFIARA---QRIEYDCEL 305
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
V R +++ +EK + + V V +A GA H+ V+ +
Sbjct: 306 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 346
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
+ + +WG+G +G+LG D++ P++V L D F R +++ G ++
Sbjct: 347 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGA-TQIYAGYTCSF 395
Query: 432 AIS 434
A+S
Sbjct: 396 AVS 398
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 70/176 (39%), Gaps = 53/176 (30%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +ACG H L L S +VFSWG G G+LGH E D + P+ V FD
Sbjct: 330 VRDVACGANHTLVLDSQK-----RVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 384
Query: 129 THISAGWNHSGFVSDSGCLF-----------------------------TCGDG------ 153
T I AG+ S VS+ G LF CG
Sbjct: 385 TQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAA 444
Query: 154 -----------TFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
TFG+LG+GD++ SS +V + Q+A G HSLV+ +D
Sbjct: 445 DESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 500
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 161/392 (41%), Gaps = 70/392 (17%)
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG GQLG
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
G S + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 83 LGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVPHGP 139
Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSLP-- 276
R V +PQ I LH ++V I+A + A +A G ++ WG G S CP Q+LP
Sbjct: 140 RRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLF 197
Query: 277 ---------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ L S+A G +H LT GEV + G + HG L++ ++ P+
Sbjct: 198 FTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFLPVP 254
Query: 325 VALEKVSNLDGVKVIQIAAGAEH--SAVVTGK-FHWVRL---------------FIISYT 366
+E KV I +G H + TGK F W R +
Sbjct: 255 QKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQD 313
Query: 367 PFFP-----------PFFINVIAE-------NRAIM-----TWGWGEHGQLGLGNTCDQI 403
F P P + E N AI+ +WGW EHG G G +
Sbjct: 314 SFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGTEANVW 373
Query: 404 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 435
PK V + + L V CG+G + A+ +
Sbjct: 374 APKPV----QALLSSSGLLVGCGAGHSLALCQ 401
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 27/172 (15%)
Query: 59 QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
++ L + ++ +LA G H +LT G+V+ WG GQL + E P+ +
Sbjct: 205 RVTGLENSKAMCVLA-GSDHSASLTD-----AGEVYVWGSNKHGQLAN-EAAFLPVPQKI 257
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-------------HGDYRS 165
+T I +GW H +++G +FT G +GQLG +
Sbjct: 258 EAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLP 317
Query: 166 HSSP---VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
S P + S +++CG H+L + +G Y +G + G G
Sbjct: 318 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAI----IGGVCYSWGWNEHGMCG 365
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL + PQ + + V+ + G H++A T GK
Sbjct: 232 EVYVWGSNKHGQLANEAAFLPV-PQKIEAHCFQNEKVTAIWSGWTHLVAQTET-----GK 285
Query: 93 VFSWGRGSSGQLGHG---------EMVDALYP--KPVTFFDGHRYTIT---HISAGWNHS 138
+F+WGR GQLG E D+ P +P + +T +S G H+
Sbjct: 286 MFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHN 345
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
G ++ G G G G + +P V + ++ + + CG HSL L +
Sbjct: 346 -LAIIGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 150/366 (40%), Gaps = 45/366 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ S + ACG H LALT G VF
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET-----GSVF 224
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 225 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 282
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH +Y P +V+ F+ K V +ACG H+
Sbjct: 283 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 342
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I A S
Sbjct: 343 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGASQIYAGYTCS 396
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ A G + ++V + +
Sbjct: 397 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 456
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
G L + + S A ++V LDG+ Q+A G HS V+ I
Sbjct: 457 PTFGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKK 513
Query: 366 TPFFPP 371
P + P
Sbjct: 514 LPEYNP 519
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 154/379 (40%), Gaps = 63/379 (16%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ P+ + I + G N
Sbjct: 160 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHE--VIVSAACGRN 212
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ ++++G +F G+ GQLG G+ SP ++ + + + ++ACG S+++
Sbjct: 213 HTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIM-- 269
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
DC GN +Y FG + GQLG + D ++ +D E+V R A+ E
Sbjct: 270 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 317
Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
T D Q LP ++ A G NH LVL V G +G L
Sbjct: 318 ---------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 365
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPP 371
E+ P L K+ + G QI AG S V+ G F W + +P
Sbjct: 366 EQKDEMVP---RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPK 422
Query: 372 FFIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDEF 414
+ ++A + + ++WG G+LG G+ PK E
Sbjct: 423 AVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH----KPKSSTAAQEV 478
Query: 415 QNRDTQLEVFCGSGFTYAI 433
+ D G+++++
Sbjct: 479 KTLDGIFSEQVAMGYSHSL 497
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 68/303 (22%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + ++ + ACG H+L L +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 220
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V+ FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 221 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ + Q LG N DG+ + + D E
Sbjct: 276 YSFG----------CPE-------YGQ--LGHNS------DGKFI---ARAQRIEYDCEL 307
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
V R +++ +EK + + V V +A GA H+ V+ +
Sbjct: 308 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ----------------- 348
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
+ + +WG+G +G+LG D++ P++V L D F R +++ G ++
Sbjct: 349 ---------KRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-FPGRGAS-QIYAGYTCSF 397
Query: 432 AIS 434
A+S
Sbjct: 398 AVS 400
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 177/442 (40%), Gaps = 82/442 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D PQ L + + + GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD-----GGDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + L G I ++ GW+ + +++ G + +CG
Sbjct: 72 VCGLNKDGQLGLGHTEEVLRFTICKPLRG--CPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG-----S 207
FGQLG HG R P + K V +A G+RH+L V+ +G S
Sbjct: 130 FGQLGVPHGP-RKCVVPQAIECLREKVVC-VAAGLRHALATTAT---GSVFQWGTGLASS 184
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFN 264
G+R G + + P GL + V A D SA+L+ G LY WGR G
Sbjct: 185 GRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQL 244
Query: 265 STSDVNCPQSLPSSLS---FSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-E 315
++ V P LP + F + GW H++ T G+V G + +G L E
Sbjct: 245 ASRAVFLP--LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLE 302
Query: 316 RVSSTRPL----SVALEKVSN--------LDGVKVIQIAAGAEHS-AVVTGKFHWVRLFI 362
+ +P+ S+A + N L G +I+ G+EH+ AV+ K
Sbjct: 303 PPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRDK-------- 352
Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 422
+WGW EHG G G + P V +R L
Sbjct: 353 --------------------CCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSR--LLL 390
Query: 423 VFCGSGFTYAISR---HCLPSQ 441
V CG+G + A+ + H +P Q
Sbjct: 391 VGCGAGHSLAVCQLPAHPVPCQ 412
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 24/121 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-----------------LSSLSSVSMLACGGA 77
KV++WG GQLG RL + + + L L+ + ++CG
Sbjct: 285 KVFTWGRADYGQLGR-RLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSE 343
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
H LA VI K SWG G G G + P PV + + G H
Sbjct: 344 HNLA------VIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGH 397
Query: 138 S 138
S
Sbjct: 398 S 398
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 26/332 (7%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V S G + GQLG G EL + L +L V +++CG H LA+ G+V
Sbjct: 43 RVLSCGDNSRGQLGRRGAQRGELPEPIQALETLI-VDLVSCGKEHSLAVCH-----KGRV 96
Query: 94 FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG GS GQLG GE + + PK + + + I +S G HS +S +F+ G
Sbjct: 97 FAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK--IIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+A G HS L L +G+GS G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAG 211
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QL +S + S +++G L ++ +V IS +A L+ +G ++T+G G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 265 STSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSST 320
T + PQ + SQ G H L G+V+ G S + PE ++
Sbjct: 272 PTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTEN 331
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+S + +D V+V I AG + V T
Sbjct: 332 FDISCLISAEDFVD-VQVKHIFAGTYANFVTT 362
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 56/319 (17%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ ++G HS + + + +CGD + GQLG + P + + V ++CG
Sbjct: 25 LLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGK 84
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
HSL + C +V+ +G+G GQLG+ + + S + P+ + L+DI+I+ +S S
Sbjct: 85 EHSLAV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKIMTLNDIKIIQVSCGHYHS 140
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTG 296
ALS + +++WG+ NS + + PS S +Q A G H L+
Sbjct: 141 LALSKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 297 DGEVLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTG 353
G G + G L+ R V S +PLSV L + V+ I+ G H+AV+T
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGDAHTAVLT- 252
Query: 354 KFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
++ + T+G GQLG T ++ P++V D
Sbjct: 253 -------------------------QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG 287
Query: 414 FQNRDTQLEVFCGSGFTYA 432
+ ++ CGS T A
Sbjct: 288 LVS-----QIDCGSYHTLA 301
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ++P Q+ + V +ACG H +AL + G++F
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD-----GELF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + +I+ G S V DSG ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HTKRVVNIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
SK+ + +S Q+ + + + + SAA + GH+Y WG+
Sbjct: 267 TGSKNNL--LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 20/261 (7%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G + +G H ++ G ++ G
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSG-PHVLLTTEDGVVYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +PV+V ++ + K V ++ACG HS+ L D +++ +G
Sbjct: 101 HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD---GELFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQ+G S + +VT LH +V I+ S A+ G +Y WG N +
Sbjct: 158 GQVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
Query: 270 -NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N Q P ++ +Q G+ H L LT +G + G + +G L + + P
Sbjct: 217 NNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP 276
Query: 323 LSVALEKVSNLDGVKVIQIAA 343
+ +EK +VI+IAA
Sbjct: 277 TQIMVEK------ERVIEIAA 291
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKV 93
+V+ +G LGTG L P+ L + L+ G G HVL T G V
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTED-----GVV 96
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG QLG+G + P V + I ++ G +HS ++ G LF G
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVI-EVACGSHHSMALAADGELFAWGYN 155
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQ+G G + +P KV++ ++ K V IACG S+ +L +VYG+G GQ
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDS---GEVYGWGYNGNGQ 212
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG+ + + P LH + + I + AL+ EG LY WG
Sbjct: 213 LGLGNNGNQLT--PVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 45/288 (15%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM-RHSLVLL 194
N + +V+D+ +F G LG GD +S P K+ + K + ++ G H L+
Sbjct: 32 NEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D + VY +G QLG + ++ QV L +++ ++ S AL+A+G
Sbjct: 92 EDGV---VYAWGHNGYSQLGNGTTN-QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 255 HLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGG 305
L+ WG G ST++ P+ + + L + A G + + GEV G
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISY 365
+ +G L + P+ +V+ L G+ V QI G H+ +T
Sbjct: 208 NGNGQLGLGNNGNQLTPV-----RVAALHGMCVNQIVCGYAHTLALT------------- 249
Query: 366 TPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 413
+ + WG +GQLG G+ + + P + + E
Sbjct: 250 -------------DEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKE 284
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG +GQLG G ++L+P + V+ + CG AH LALT G ++
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDE-----GLLY 255
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI-----THISAGWNHSGFV 141
+WG + GQLG G + L P + I TH SA G V
Sbjct: 256 AWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHV 307
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 50/247 (20%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ L +I +S L+ E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYA 98
Query: 259 WGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHG 309
WG G +T+ P + ++L Q A G +H + L DGE+ G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSN-LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
+ + P KV+N L +V+ IA G S V
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHTKRVVNIACGQTSSMAVL---------------- 197
Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGS 427
++ + WG+ +GQLGLGN +Q+ P +V L N ++ CG
Sbjct: 198 ----------DSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVN-----QIVCGY 242
Query: 428 GFTYAIS 434
T A++
Sbjct: 243 AHTLALT 249
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 142/348 (40%), Gaps = 49/348 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ + ACG H LALT G V+
Sbjct: 143 KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE-----NGTVY 197
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G I ++ G S V G L++ G
Sbjct: 198 TFGENKLGQLGQGNQTDAVLSPATIQYNGQ--PIVKVACGAEFSMIVDCKGNLYSFGCPE 255
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH ++ P +V+ F+ K +ACG H+
Sbjct: 256 YGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHT 315
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I S
Sbjct: 316 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYCGYQCS 369
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
ALS G L+ WG S P+++ A G + ++V D +
Sbjct: 370 FALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTISWGPS 429
Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
G L D + SST ++V LDGV Q+ G HS V+
Sbjct: 430 PTFGELGYGDNKPKSST-----TAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 151/383 (39%), Gaps = 63/383 (16%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ PK + I + G N
Sbjct: 133 AHSLIITTE-----GKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE--VIVAAACGRN 185
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
H+ ++++G ++T G+ GQLG G+ + + + ++ACG S+++ D
Sbjct: 186 HTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIV--D 243
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
C GN +Y FG + GQLG + D ++ D E++ R A+ E
Sbjct: 244 CKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIEF---DCELI------PRRVAIFIE--- 290
Query: 257 YTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
T D Q LP ++ A G NH LVL V G +G L E
Sbjct: 291 --------KTKD---GQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAE 339
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRLFIISYTPFFPPF 372
+ P L K+ + G QI G + S ++ G F W + +P
Sbjct: 340 QKDEMVP---RLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKA 396
Query: 373 FIN----------------VIAENRAIMTWGWGE-HGQLGLGNTCDQIHPKVVNLGDEFQ 415
+ ++A + + ++WG G+LG G+ PK E +
Sbjct: 397 VQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDN----KPKSSTTAQEVK 452
Query: 416 NRD--TQLEVFCGSGFTYAISRH 436
D +V G + I+R
Sbjct: 453 TLDGVYSEQVVMGYSHSLVIARQ 475
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 145/359 (40%), Gaps = 51/359 (14%)
Query: 29 EEQQVVKVWSWGAGTDGQLGTGR------------LHDELSPQLLNLSSLSSVSMLACGG 76
+ + V KVW G D QLG R L P L+ + V ++CG
Sbjct: 121 KTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGR 180
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHI 131
AH L LT V FS G S GQ G + D +Y + + FDG + +
Sbjct: 181 AHSLVLTDREGV-----FSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQ---VVQV 232
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHS 190
G +HS F++D G +++CG G GQ G G Y S+P K+ V Q+A
Sbjct: 233 VCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D V+G+G+ + QL D + V++P+ ++ ++ G A L
Sbjct: 293 LALSAD---GGVFGWGNSEYLQLASVTDSTQ-VNVPRCLPFSGVGKVKQVACGGTGCAVL 348
Query: 251 SAEGHLYTWGRGF----NSTSDVNCPQSLPSSL----------SFSQAALGWNHVLVLTG 296
+AEGH++ WG G + P+ +P +L SQ G +H LT
Sbjct: 349 NAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTN 408
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
GE+ + G + G L P V + + + +A G +H + F
Sbjct: 409 KGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPG-------EPVDVACGVDHMVTLAKSF 460
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 166/441 (37%), Gaps = 83/441 (18%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTG---------------RLHDELSPQLLNLSSLSSVSML 72
E + +V+ WG G LG R + P L +S
Sbjct: 50 ERAARADRVFVWGFSFSGALGVPSFVVPSSGPGPRAGLRPRRRIQPVPYRLELDHKISSA 109
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG-HGEMVD-------ALYPKPVTF-FDG 123
ACG L + V KV+ G QLG H D L P PV D
Sbjct: 110 ACGYGFTLLSSKTKDVT--KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDR 167
Query: 124 HRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSHSSPVKVSSFVNK 178
+ T + +S G HS ++D +F+ G+ + GQ G + S S V +
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDG 227
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
V Q+ CG HSL L +VY G G GQ G+ I S ++ L + +V
Sbjct: 228 QVVQVVCGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYNITSTP-SKLGGDLAGVTVV 283
Query: 239 GISANGDRSAALSAEGHLYTWGRG-------FNSTSDVNCPQSLPSSL--SFSQAALGWN 289
++ GD ALSA+G ++ WG ++ VN P+ LP S Q A G
Sbjct: 284 QVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGT 343
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRP--LSVALEKVSNLDG-VKVIQIAAGA 345
VL +G V + G +G+L P+ + + P + L ++ + V+V QI G
Sbjct: 344 GCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGL 400
Query: 346 EHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP 405
H A +T K LF+ WG G LG+G DQ P
Sbjct: 401 SHFAALTNKGE---LFV-----------------------WGKNIRGCLGIGRLEDQYFP 434
Query: 406 KVVNLGDEFQNRDTQLEVFCG 426
V + E ++V CG
Sbjct: 435 WRVTMPGE------PVDVACG 449
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 148/347 (42%), Gaps = 45/347 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G + P+L+ ACG H LALT G V+
Sbjct: 161 KLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTE-----NGSVY 215
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 216 AFGENKMGQLGLGNKTDAVPSPAQILYNGQ--PITKVACGAEFSMIMDCKGNLYSFGCPE 273
Query: 155 FGQLGH---GDYRSHSSPV---------KVSSFVNKN------------VHQIACGMRHS 190
+GQLGH G Y + + + +++ F+ K V IACG+ HS
Sbjct: 274 YGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHS 333
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
L+L +V+ +G G G+LG S+ R V P++ + L D G I A S
Sbjct: 334 LILDSQ---KRVFSWGFGGYGRLGHSEQRDEMV--PRL-VKLFDFPGRGAAQIYAGATCS 387
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ + +L G + ++V + +
Sbjct: 388 FAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPS 447
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G L + + + S ++V LDG+ Q+ G H+ VV
Sbjct: 448 PTFGELGYGDNKAKS---STTAQEVKTLDGIYSDQVIMGNSHTLVVA 491
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 153/356 (42%), Gaps = 60/356 (16%)
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
+ SV+ +C AH L +T + GK++SWGR GQLGHG++ PK + G
Sbjct: 141 VRSVASGSCA-AHSLLIT-----VEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEV 194
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIA 184
+ H + G NH+ ++++G ++ G+ GQLG G+ ++ + P N + + ++A
Sbjct: 195 F--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVA 251
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
CG S+++ DC GN +Y FG + GQLG + D ++ +D E++
Sbjct: 252 CGAEFSMIM--DCKGN-LYSFGCPEYGQLGHNSDGKYIARAQRIE---YDCELIA----- 300
Query: 245 DRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLML 303
R A+ E T D Q LP ++ A G NH L+L V
Sbjct: 301 -RRIAIFIE-----------KTKD---GQILPVPNVVVRDIACGINHSLILDSQKRVFSW 345
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT---GKFHWVRL 360
G +G L E+ P L K+ + G QI AGA S V+ G F W
Sbjct: 346 GFGGYGRLGHSEQRDEMVP---RLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWGAT 402
Query: 361 FIISYTPFFPPFFIN----------------VIAENRAIMTWGWG-EHGQLGLGNT 399
+ +P + ++A + + ++WG G+LG G+
Sbjct: 403 NTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDN 458
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 130/303 (42%), Gaps = 68/303 (22%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + P + S + ACG H+L L ++
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
VY FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 212 ---GSVYAFGENKMGQLGLG-NKTDAVPSP-AQILYNGQPITKVACGAEFSMIMDCKGNL 266
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ + Q LG N DG+ + + D E
Sbjct: 267 YSFG----------CPE-------YGQ--LGHNS------DGKYIARA---QRIEYDCEL 298
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
++ R +++ +EK + + V V IA G HS ++ +
Sbjct: 299 IA--RRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQ----------------- 339
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 431
+ + +WG+G +G+LG D++ P++V L D F R +++ G+ ++
Sbjct: 340 ---------KRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFD-FPGRGA-AQIYAGATCSF 388
Query: 432 AIS 434
A+S
Sbjct: 389 AVS 391
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GK 92
+V+SWG G G+LG DE+ P+L+ L G A + A + S + G
Sbjct: 341 RVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGR-----GAAQIYAGATCSFAVSEMGG 395
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WG ++ + +YPK V G + + ++ G + +D +
Sbjct: 396 LFFWGATNTSR------DSTMYPKAVQDLCG--WKVRSLACGKSSIIVAADESTISWGPS 447
Query: 153 GTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKD 196
TFG+LG+GD ++ SS +V + Q+ G H+LV+ +D
Sbjct: 448 PTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 115/231 (49%), Gaps = 18/231 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
KV++ G +GQLG G + + L++ +S + L+ G ALT G++
Sbjct: 107 KVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE-----DGEL 161
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG S GQ+G + + P+ VT I+ IS G+ HS FV+ G L+T G+
Sbjct: 162 FMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEP 217
Query: 154 TFGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G+LG + +H P V K V Q+ACG H++VL + VY FG G+ G
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPGIPGK-VVQVACGGGHTVVLTEKA----VYTFGLGQFG 272
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
QLG+ + S+P+ + D +I I+ + +A ++ G +YT+G G
Sbjct: 273 QLGLGT-FLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ACG H L T GGKV+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTE-----GGKVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF R I +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTEDGELFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + Q+Y FG + G+LG
Sbjct: 169 EGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHSAFVTTE---GQLYTFGEPECGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS------ 267
+ + + +PQ G+ ++V ++ G + L+ E +YT+G G F
Sbjct: 224 LPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLF 281
Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ + P+++ S A G NH ++T G + G HG L
Sbjct: 282 ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKL 327
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 41/275 (14%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T +S G H+ V+ + L+ G +GQLG G + S P V + + V ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H+LV + G +VY G GQLG+ RS + ++ +I +SA + SA
Sbjct: 98 HTLVSTE---GGKVYAAGGNNEGQLGLGDTEERS-TFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL+ +G L+ WG G + ++V PQ + S + G+ H +T +G++
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFI 362
G G L P ++ + + V + G KV+Q+A G H+ V+T K
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMP---QPVPGIPG-KVVQVACGGGHTVVLTEK-------- 261
Query: 363 ISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLG 397
A+ T+G G+ GQLGLG
Sbjct: 262 -------------------AVYTFGLGQFGQLGLG 277
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYT 127
V +ACGG H + LT + V+++G G GQLG G + + PK + +
Sbjct: 245 VVQVACGGGHTVVLTEKA------VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQK-- 296
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIAC 185
I+ I+ G NH+ ++D G ++T GDG G+LG G S + P S+F+ V ++C
Sbjct: 297 ISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSC 356
Query: 186 GMRHSLVLLKDCLG 199
G H+LV LG
Sbjct: 357 GGCHTLVFATPRLG 370
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 46/184 (25%)
Query: 240 ISANGDRSAALSAEGHLY-----TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALGWN 289
+S + +A ++ LY WG+ G S S V+ P + P + F AA G N
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF--AACGRN 97
Query: 290 HVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H LV T G+V GG++ G L D E S+ +S + K+ Q++AG+
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR------KIKQLSAGSNT 151
Query: 348 SAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKV 407
SA +T E+ + WG GQ+GL N + P+
Sbjct: 152 SAALT--------------------------EDGELFMWGDNSEGQIGLENVTNVCVPQQ 185
Query: 408 VNLG 411
V +G
Sbjct: 186 VTVG 189
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ++P Q+ + V +ACG H +AL + G+VF
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD-----GEVF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + I+ G S V D+G ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HIKRVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ + V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
++ L I + +V I+A + SAA + GH+Y WG+
Sbjct: 267 TGN---KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 29/303 (9%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
LSPQ ++S+ + + L +T +VF +G S LG G+ L P
Sbjct: 13 LSPQ--EIASIRKACVFGTSASEALYVTD-----NDEVFVFGLNYSNCLGTGDNQSTLVP 65
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-SS 174
K + G + +G H ++ G ++ G + QLG+G +PV+V ++
Sbjct: 66 KKLEGLCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTN 124
Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
+ K V ++ACG HS+ L D +V+ +G GQ+G S + +VT LH
Sbjct: 125 LLIKQVVEVACGSHHSMALAAD---GEVFAWGYNNCGQVG-SGSTANQPTPRKVTNCLHI 180
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAAL 286
+VGI+ S A+ G +Y WG G + + P + + S+ +Q
Sbjct: 181 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G+ H L LT +G + G + +G L + + P + +EK +V++IAA
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK------ERVVEIAAC-- 292
Query: 347 HSA 349
HSA
Sbjct: 293 HSA 295
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 20/196 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG GQ+G+G ++ +P ++ N + V +ACG +A+ G+V
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD-----NGEV 202
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P V H + I G+ H+ ++D G L+ G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
T+GQLG G+ + SP + + V AC H+ G VY +G RGQ
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ--GGHVYMWGQC-RGQ- 316
Query: 214 GVSKDRIRSVSLPQVT 229
SV LP +T
Sbjct: 317 --------SVILPHLT 324
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 50/247 (20%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ GL +I +S LS E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 259 WGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHG 309
WG G +T+ P + ++L Q A G +H + L DGEV G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
+ + P KV+N +K V+ IA G S V
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHIKRVVGIACGQTSSMAVL---------------- 197
Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGS 427
+N + WG+ +GQLGLGN +Q+ P +V L N ++ CG
Sbjct: 198 ----------DNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVN-----QIVCGY 242
Query: 428 GFTYAIS 434
T A++
Sbjct: 243 AHTLALT 249
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 24/287 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G + P + V + ACG H L T G V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTD-----TGGVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ D + FF TI +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD-TIKQLSAGANTSAALTEDGKLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G D + P +V+ V K + I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMD---GELYTFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
+ + + + PQ +G+ + ++ ++ G + L+ E +Y +G G
Sbjct: 224 LPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLT-EKVVYAFGLGQFGQLGLGTFLF 281
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
TS+ + + + G NH ++T G + G HG L
Sbjct: 282 ETSEPKIIERIKDQ-KICHISCGENHTALMTELGLLYTFGDGRHGKL 327
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 131/319 (41%), Gaps = 58/319 (18%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G H+ V+ + L+ G +GQLG G + P + + + V ACG H+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
LV D G VY G GQLG+ R + Q+ I +SA + SAAL
Sbjct: 100 LVST-DTGG--VYAAGGNNEGQLGLGDTDDRD-TFHQIVFFTPADTIKQLSAGANTSAAL 155
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
+ +G L+ WG G S+V P + S + G+ H +T DGE+ G
Sbjct: 156 TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFG 215
Query: 305 GSHHGMLSDPERV-----SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT------- 352
+G L P + S R L + +VIQ+A G H+ V+T
Sbjct: 216 EPENGKLGLPNELLMNHRSPQRVLGIP---------ERVIQVACGGGHTVVLTEKVVYAF 266
Query: 353 --GKFHWVRL--FIISYTPFFPPFFINVIAENR-----------AIM-------TWGWGE 390
G+F + L F+ + P I I + + A+M T+G G
Sbjct: 267 GLGQFGQLGLGTFLFETS---EPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGR 323
Query: 391 HGQLGLG--NTCDQIHPKV 407
HG+LGLG N +Q P +
Sbjct: 324 HGKLGLGMENFTNQFFPTL 342
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G +G+LG L + SPQ + L V +ACGG H + LT
Sbjct: 210 ELYTFGEPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVVLTEKV------ 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + + I HIS G NH+ +++ G L+T G
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQK--ICHISCGENHTALMTELGLLYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
DG G+LG G ++ + P S+F+ V IACG H LV LG
Sbjct: 321 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATPRLG 370
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 94/273 (34%), Gaps = 91/273 (33%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
V D+G +FT G F + + P K F N ++CG H+ ++ +
Sbjct: 7 LVPDTGAVFTFGKTKFAE---------NIPSKFW-FKNDIPICLSCGDEHTAIVTGN--- 53
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
N++Y FGS GQLG+ G ++A +
Sbjct: 54 NKLYMFGSNNWGQLGL----------------------------GSKAAIIKP------- 78
Query: 260 GRGFNSTSDVNCPQSL-PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
C ++L P + AA G NH LV T G V GG++ G L +
Sbjct: 79 ----------TCIKALKPEKVKL--AACGRNHTLVSTDTGGVYAAGGNNEGQLG----LG 122
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIA 378
T + V + Q++AGA SA +T
Sbjct: 123 DTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT-------------------------- 156
Query: 379 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 411
E+ + WG GQ+GL + + P V +G
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVG 189
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 36/245 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G +D P+++ + ++CG +HVLA+T+ +VFS
Sbjct: 419 IMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNER-----EVFS 473
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTF---FDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WGRG +G+LG P+ V+ F+ R + G + S +S + CG+
Sbjct: 474 WGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR-----VLCGVDCSMIMSTQHQILACGN 528
Query: 153 GTFGQLGHGDYRSHSSP--------------VKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
F +LG P V+ + + + I G HS+ + +
Sbjct: 529 NRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEK-- 586
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLY 257
Q + FGS + GQLG S R S +P GL I + +A GD + A+ AEG +Y
Sbjct: 587 -GQCFTFGSNQHGQLGCSHRR--SSRVPYQVSGLQGITM---AACGDAFTLAIGAEGEVY 640
Query: 258 TWGRG 262
TWG+G
Sbjct: 641 TWGKG 645
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 140/350 (40%), Gaps = 58/350 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG+G L L+ E V ++ G + +T G++ +
Sbjct: 322 VYTWGSGISTPLRLPMLNTE-------------VIQVSLGRTQKMGVTK-----SGRLIT 363
Query: 96 WGRGS--SGQLGHGEMVDALYPKPVT-FFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
W S SG+ V+ + P+ ++ F +G TI +S G + ++D G + T G
Sbjct: 364 WEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFG 423
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G+ G LGHG++ + P V + + + Q++CG H L + + +V+ +G G G
Sbjct: 424 SGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNE---REVFSWGRGDNG 480
Query: 212 QLGV----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
+LG+ S + + VSLP D E + D S +S + + G
Sbjct: 481 RLGLATQDSHNCPQQVSLPA------DFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKL 534
Query: 262 GFNSTSDVNCPQSLPSS-----LSFSQAA-----------LGWNHVLVLTGDGEVLMLGG 305
G + S P S Q+A +G H + +T G+ G
Sbjct: 535 GLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGS 594
Query: 306 SHHGMLSDPERVSSTRPLSVA-LEKVSNLDGVKVIQIAAGAEHSAVVTGK 354
+ HG L R SS P V+ L+ ++ +A GAE GK
Sbjct: 595 NQHGQLGCSHRRSSRVPYQVSGLQGITMAACGDAFTLAIGAEGEVYTWGK 644
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 145/399 (36%), Gaps = 98/399 (24%)
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
LSSL+S M+ H L L S V++WG G S L M++
Sbjct: 305 LSSLTSSKMM-----HPLPLFS--------VYTWGSGISTPL-RLPMLNT---------- 340
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFT-----CGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
+ +S G V+ SG L T G G G + P +S F+
Sbjct: 341 ----EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVE---QMQPQFISRFLE 393
Query: 178 ----KNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
+ ++CG L CL ++ + FGSG G LG V+ P++
Sbjct: 394 GQSGVTIKSVSCGD-----LFTTCLTDRGIIMTFGSGSNGCLG--HGNFNDVTQPKIVEA 446
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----STSDV-NCPQ--SLPSSLSFSQ 283
L E+V +S A++ E +++WGRG N +T D NCPQ SLP+ +
Sbjct: 447 LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR 506
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA---------LEKVSNLD 334
G + ++++ ++L G + L + + P S L + + L+
Sbjct: 507 VLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLN 566
Query: 335 GVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQL 394
K++ I G HS VT E T+G +HGQL
Sbjct: 567 TEKIVYIDIGTAHSVAVT--------------------------EKGQCFTFGSNQHGQL 600
Query: 395 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 433
G H + + + CG FT AI
Sbjct: 601 GCS------HRRSSRVPYQVSGLQGITMAACGDAFTLAI 633
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +++G+ GQLG P +S L ++M ACG A LA+ + G+V+
Sbjct: 588 QCFTFGSNQHGQLGCSHRRSSRVP--YQVSGLQGITMAACGDAFTLAIGAE-----GEVY 640
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
+WG+G+ G+LG E D PKPV + H +T+T ++
Sbjct: 641 TWGKGARGRLGRKEE-DFGIPKPVQLDESHAFTVTSVAC 678
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G +G+LG PQ ++L + + CG + +++ ++
Sbjct: 470 EVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQH-----QIL 524
Query: 95 SWGRGSSGQLGHGEMVDALYP------KPVTFFDG------HRYTITHISAGWNHSGFVS 142
+ G +LG ++ P + V F + I +I G HS V+
Sbjct: 525 ACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVT 584
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+ G FT G GQLG RS P +VS + + ACG +L + + +V
Sbjct: 585 EKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL--QGITMAACGDAFTLAIGAE---GEV 639
Query: 203 YGFGSGKRGQLGVSKD 218
Y +G G RG+LG ++
Sbjct: 640 YTWGKGARGRLGRKEE 655
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGF 429
F + + IMT+G G +G LG GN D PK+V LG E ++V CG+
Sbjct: 408 LFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYEL------VQVSCGASH 461
Query: 430 TYAIS 434
A++
Sbjct: 462 VLAVT 466
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 144/355 (40%), Gaps = 51/355 (14%)
Query: 33 VVKVWSWGAGTDGQLGTGRLHD----------ELSPQLLNLSSLSSVSML--ACGGAHVL 80
V KVW G D QLG R E SP L L +L +CG AH L
Sbjct: 128 VTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSL 187
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHISAGW 135
LT V FS G S GQ G + + +Y + + FDG + ++ G
Sbjct: 188 VLTDREGV-----FSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ---VVQVACGQ 239
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
+HS F++D G +++CG G GQ G G Y SSP K+ NV Q+A L +
Sbjct: 240 DHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVS 299
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
D ++G+G+ + QL D + V++P+ ++ + G A L+ EG
Sbjct: 300 AD---GGLFGWGNSEYLQLASVTDSTQ-VNVPRCLHFSGVGKVRQAACGGTGCAVLNGEG 355
Query: 255 HLYTWGRGF----NSTSDVNCPQSLPSSL----------SFSQAALGWNHVLVLTGDGEV 300
H++ WG G + + P+ +P +L S+ G +H LT GE+
Sbjct: 356 HVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGEL 415
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
+ G + G L P V + + + +A G +H + F
Sbjct: 416 FVWGKNIRGCLGIGRLEDQYFPWRVTMPG-------EPVDVACGVDHMVTLAKSF 463
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 81/230 (35%), Gaps = 61/230 (26%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
PV +++ + ACG +L+ K +V+G G K QLG + R
Sbjct: 98 PVPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSR--------- 148
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGW 288
D++ G+ Y S V+ P P Q + G
Sbjct: 149 ---------------KDKT-----RGYEYVL-----EPSPVSLPLDRPQETRVLQVSCGR 183
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H LVLT V +G + +G + S + ++ + DG +V+Q+A G +HS
Sbjct: 184 AHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDG-QVVQVACGQDHS 242
Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
+T K + + GWG GQ GLG+
Sbjct: 243 LFLTDKGE--------------------------VYSCGWGADGQTGLGH 266
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 146/348 (41%), Gaps = 71/348 (20%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ--LGHGEMVDALYPKPVTFFDGHRYTIT 129
+ACG H+L L+S G++ +WG GQ +GH + L+ DG I
Sbjct: 781 IACGAEHILVLSS-----SGQLSAWGGNRFGQCGVGHSFRIANLHQ-----VDGDWPAIE 830
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS---PVKVSSFVNKNVHQIACG 186
I+ G HS F+ G L+T G G +GQLGHG R++S+ P +V+ + K V QIACG
Sbjct: 831 KIACGQFHSAFICSDGSLWTFGWGVWGQLGHGG-RNNSNQLVPTRVNGLICK-VTQIACG 888
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H++VL +V GSG GQ+GV D + + + +G + + I+ +
Sbjct: 889 RAHTVVLTD---TGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLG--PLRVRDIATHYYH 943
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
S ++ + ++ WGR P L + L + S
Sbjct: 944 SICITEDNRVFEWGRN-------------PQELKMRMFVMKKIRSAQLKNTEDPSSPSPS 990
Query: 307 HHGMLSDPERVSSTRPLSVALEKVS------NLDGVKVIQIAAGAEHSAVVTGKFHWVRL 360
+G S P RV+ P + E + LDG ++ +A G HSA++T +
Sbjct: 991 TNG--STP-RVNLNLPAEIPREDLGLREVKHFLDG-NIVSVACGLSHSALITSE------ 1040
Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
+ TWG G QLG GN +++ P V
Sbjct: 1041 --------------------GTLYTWGKGLDYQLGHGNKNERMEPHQV 1068
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 64/321 (19%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVIGGKV 93
+WG GQ G G S ++ NL + ++ +ACG H + S G +
Sbjct: 799 AWGGNRFGQCGVGH-----SFRIANLHQVDGDWPAIEKIACGQFHSAFICS-----DGSL 848
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+++G G GQLGHG ++ P T +G +T I+ G H+ ++D+G + CG G
Sbjct: 849 WTFGWGVWGQLGHGGRNNSNQLVP-TRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSG 907
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK---R 210
++GQ+G D V IA HS+ + +D N+V+ +G +
Sbjct: 908 SYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITED---NRVFEWGRNPQELK 964
Query: 211 GQLGVSKDRIRSVSL----------------------------PQVTIGLHDIE------ 236
++ V K +IRS L P+ +GL +++
Sbjct: 965 MRMFVMK-KIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGN 1023
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSL--PSSLSFSQAALGW 288
IV ++ SA +++EG LYTWG+G + + ++ P + P+ + +LG
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGN 1083
Query: 289 NHVLVLTGDGEVLMLGGSHHG 309
NH + T DG V G + G
Sbjct: 1084 NHTIASTDDGSVFAWGKNDFG 1104
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+ACG +H +TS G +++WG+G QLGHG + + P V +G ++ ++
Sbjct: 1027 VACGLSHSALITSE-----GTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWV--NV 1079
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
S G NH+ +D G +F G FGQ G
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 90/270 (33%), Gaps = 99/270 (36%)
Query: 36 VWSWGAGTDGQLGTGRLHD--ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI---- 89
+W++G G GQLG G ++ +L P +N + V+ +ACG AH + LT V+
Sbjct: 848 LWTFGWGVWGQLGHGGRNNSNQLVPTRVN-GLICKVTQIACGRAHTVVLTDTGRVLVCGS 906
Query: 90 -------------------------------------------GGKVFSWGRG------- 99
+VF WGR
Sbjct: 907 GSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMR 966
Query: 100 -------SSGQLGHGEMVDALYPKPVT---------------------------FFDGHR 125
S QL + E D P P T F DG+
Sbjct: 967 MFVMKKIRSAQLKNTE--DPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGN- 1023
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
I ++ G +HS ++ G L+T G G QLGHG+ P +V ++
Sbjct: 1024 --IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSL 1081
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G H++ D V+ +G GQ GV
Sbjct: 1082 GNNHTIASTDD---GSVFAWGKNDFGQCGV 1108
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats.
Identities = 77/283 (27%), Positives = 114/283 (40%), Gaps = 61/283 (21%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK---NVHQIA 184
I IS G HS F++D G L+T GDG G+LGHG+ S+SSP V F K V IA
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-DRIRSVSLPQV--------------- 228
G +HSL L + +VY +G QLG+ SLPQ+
Sbjct: 250 NGGKHSLAL---TICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 229 -------------------------TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+ + I+IV +S +RSA ++ +G L+T+GRG
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 264 NSTSDVN----CPQSLPSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSHHGMLS- 312
+ + QS P + Q G H LVLT G V G + G L
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGI 426
Query: 313 ---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ + + + +I+++AG HS ++
Sbjct: 427 GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAIS 469
Score = 72.4 bits (176), Expect = 6e-12, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 29/206 (14%)
Query: 72 LACGGAHVLALTSPSSVIGGK--VFSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYT 127
L+CG T+ S+VI K +F++GRG G+LG GE ++ PK V GH
Sbjct: 343 LSCG-------TNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGH--F 393
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNK-------- 178
I +S+G HS +++ G +F+ G GQLG G + + + P ++ F
Sbjct: 394 IIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPI 453
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV----TIGLHD 234
N+ +++ G HS+ + + N Y +G G LG S D +LP + ++ + +
Sbjct: 454 NIIKVSAGGYHSIAISDN---NDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDN 510
Query: 235 IEIVGISANGDRSAALSAEGHLYTWG 260
++ + +S+ + A+S +G LY+WG
Sbjct: 511 VKFIDVSSGFQHNVAMSIDGSLYSWG 536
Score = 65.9 bits (159), Expect = 6e-10, Method: Composition-based stats.
Identities = 73/347 (21%), Positives = 139/347 (40%), Gaps = 72/347 (20%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH-RYT 127
+ +++ G H +T G ++++G G G+LGHG + PK V FF
Sbjct: 190 IVLISTGAIHSSFITDQ-----GNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLR 244
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH------ 181
+ I+ G HS ++ G +++ G QLG G+ S SS + +N N+
Sbjct: 245 VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN-GSSSSYYSLPQLINFNISYNNNNN 303
Query: 182 --------------------------------------QIACGMRHSLVLLKDCLGNQVY 203
+++CG S V+ L ++
Sbjct: 304 NNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGL---LF 360
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
FG G G+LG+ + + S P++ L I+ +S+ G S L+ +G ++++GR
Sbjct: 361 TFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRND 420
Query: 264 NSTSDVNC---PQSLPSS--------------LSFSQAALGWNHVLVLTGDGEVLMLGGS 306
+ C Q++P ++ + + G H + ++ + + G S
Sbjct: 421 QGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRS 480
Query: 307 HHGMLSDPERVSSTRPLSVALEKVS-NLDGVKVIQIAAGAEHSAVVT 352
+G+L V R L V + S +D VK I +++G +H+ ++
Sbjct: 481 DYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMS 527
Score = 33.5 bits (75), Expect = 3.7, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLS--------SVSMLACGGAHVLALTSPS 86
V+S+G GQLG G ++ + P+ + S ++ ++ GG H +A++
Sbjct: 413 VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISD-- 470
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV------TFFDGHRYTITHISAGWNHSGF 140
++WGR G LG V PV D ++ +S+G+ H+
Sbjct: 471 ---NNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFI--DVSSGFQHNVA 525
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
+S G L++ G +LG + +P K F+N
Sbjct: 526 MSIDGSLYSWGCNAGQRLGFKSDENQLTPKKC--FIN 560
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 123/326 (37%), Gaps = 53/326 (16%)
Query: 130 HISAGWNHSGFVSDSGCLFTC-----GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+ AG H V+ L+T G GQLGHGD S+ P V K +HQ++
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 432
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
CG ++ + + Q+Y FGS G +GV K V P + +S
Sbjct: 433 CGDDFTVCVTDE---GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGD 489
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTG 296
+ L+ +Y+WG G +S D PQ +P +L G + +LT
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 297 DGEVLMLGGSHHGMLSDPERVSST--------RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
G+VL G + L + +S P + + L K+ IA G H+
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHT 609
Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
A I E ++T+G + GQLG+GN ++ +
Sbjct: 610 A--------------------------AIDERGRLLTFGCNKCGQLGVGNYKKRLGINL- 642
Query: 409 NLGDEFQNRDTQLEVFCGSGFTYAIS 434
LG + + V CG FT A +
Sbjct: 643 -LGGPLGGKQV-IRVSCGDEFTIAAT 666
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 142/355 (40%), Gaps = 65/355 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG G +PQ L+ + S S + G H +T + ++
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVT-----VEKEL 390
Query: 94 FSW-----GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
++W G GQLGHG+ PK V G I +S G + + V+D G L+
Sbjct: 391 YTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIHQVSCGDDFTVCVTDEGQLY 448
Query: 149 TCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
G +G +G P++++ F++ V Q++CG H +VL ++ +VY +G
Sbjct: 449 AFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRN---KEVYSWG 505
Query: 207 SGKRGQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-R 261
G+ G+LG+ + + V +P+ I IV + D + L+ G + G
Sbjct: 506 CGEYGRLGLDSEEDYYTPQRVDVPKALI------IVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 262 GFNSTSDVNCP---------QSLPSSLSFSQA-----------ALGWNHVLVLTGDGEVL 301
FN C +P + SF+ A A G H + G +L
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
G + G L + + L + L L G +VI+++ G E + T H
Sbjct: 620 TFGCNKCGQLG---VGNYKKRLGINLLG-GPLGGKQVIRVSCGDEFTIAATDDNH 670
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 26/245 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLH--DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G+ G +G ++ + L P LN + V ++CG HV+ LT +
Sbjct: 446 QLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR-----NKE 500
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG D P+ V I + G + + ++ SG + CG
Sbjct: 501 VYSWGCGEYGRLGLDSEEDYYTPQRVDVPKA--LIIVAVQCGCDGTFLLTQSGKVLACGL 558
Query: 153 GTFGQLGHGDYRS--------HSSPVKVSSFVNK-----NVHQIACGMRHSLVLLKDCLG 199
F +LG S H P S + K + IA G H+ + +
Sbjct: 559 NEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDER--- 615
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
++ FG K GQLGV + R + + + L +++ +S + + A + + H++ W
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKR-LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 260 GRGFN 264
G G N
Sbjct: 675 GNGGN 679
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 20/194 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG D +PQ +++ + + CG LT GKV
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ-----SGKVL 554
Query: 95 SWGRGSSGQLGHGEMVDAL--------YPKPVTFFDGHR---YTITHISAGWNHSGFVSD 143
+ G +LG + + + P +F + Y I I+ G H+ + +
Sbjct: 555 ACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQV 202
G L T G GQLG G+Y+ + + K V +++CG ++ D N +
Sbjct: 615 RGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHI 671
Query: 203 YGFGSGKRGQLGVS 216
+ +G+G G+L ++
Sbjct: 672 FAWGNGGNGRLAMT 685
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 146/379 (38%), Gaps = 70/379 (18%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
A + +TS SS +V+ WG G + P+ + F G + + AG
Sbjct: 319 APIAVVTSRSS----EVYVWGGGKTT------------PQKLDVFKGG-WRARQVCAGDA 361
Query: 137 HSGFVSDSGCLFTC-----GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
H V+ L+T G GQLGHGD S+ P V K+V +++CG ++
Sbjct: 362 HFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTV 421
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ + Q+Y FGS G LGV++ V P + + + +S AL+
Sbjct: 422 CITDE---GQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALT 478
Query: 252 AEGHLYTWG------RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLML 303
+Y+WG G +S DV PQ + L G + +LT G+VL
Sbjct: 479 RSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLAC 538
Query: 304 GGSHHGMLSDPERVS--------STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKF 355
G + H L + + P + +L L K+ I+ G H+A
Sbjct: 539 GLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTA------ 592
Query: 356 HWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 415
I E ++T+G + GQLG+G+ + H + LG
Sbjct: 593 --------------------AIDERGRLLTFGSNKCGQLGVGDY--RKHLGINLLGGPLG 630
Query: 416 NRDTQLEVFCGSGFTYAIS 434
+ + V CG FT A +
Sbjct: 631 GKQV-IRVSCGDEFTTAAT 648
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 26/245 (10%)
Query: 35 KVWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++S+G+ G LG + + L P L++ V ++CG +H++ALT S
Sbjct: 428 QLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKS----- 482
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG D P+ V G I ++ G + S ++ +G + CG
Sbjct: 483 VYSWGCGEYGRLGLDSEDDVYSPQKVEVQRG--LCIVNVCCGSDGSFLLTLTGKVLACGL 540
Query: 153 GTFGQLGHGDYRS--------HSSPVKVSSFVNK-----NVHQIACGMRHSLVLLKDCLG 199
+LG Y + P S + K + I+ G H+ + +
Sbjct: 541 NEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDER--- 597
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
++ FGS K GQLGV R + + + + L +++ +S + + A +A+ H++ W
Sbjct: 598 GRLLTFGSNKCGQLGVGDYR-KHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAW 656
Query: 260 GRGFN 264
G G N
Sbjct: 657 GNGGN 661
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 158/390 (40%), Gaps = 73/390 (18%)
Query: 6 MEETEKGKSALIN--NAKPKIEEEEEEQQVV------KVWSWGAGTDGQLGTGRLHDELS 57
MEE K +++N N KP+ E V +V+ WG G + +
Sbjct: 297 MEE----KVSMLNRSNKKPRTGTVTEAPIAVVTSRSSEVYVWGGG------------KTT 340
Query: 58 PQLLNLSSLSSVSMLACGG-AHVLALTSPSSVIGGKVFSW-----GRGSSGQLGHGEMVD 111
PQ L++ + C G AH +T + ++++W G GQLGHG+
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVT-----VEKELYTWVNMQGGSKLHGQLGHGDRAS 395
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SP 169
PK V G ++ +S G + + ++D G L++ G +G LG P
Sbjct: 396 YRQPKHVEKLQGK--SVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEP 453
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQV 228
+ V F+N+ V Q++CG H + L + VY +G G+ G+LG+ S+D + S +V
Sbjct: 454 LLVDFFLNEPVDQVSCGDSHIMALTR---SKSVYSWGCGEYGRLGLDSEDDVYSPQKVEV 510
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----------CPQSLPSS 278
GL IV + D S L+ G + G ++ +N Q +P +
Sbjct: 511 QRGLC---IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYT 567
Query: 279 LSFSQA-----------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVA 326
S + A + G H + G +L G + G L V R L +
Sbjct: 568 TSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG----VGDYRKHLGIN 623
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
L L G +VI+++ G E + T H
Sbjct: 624 LLG-GPLGGKQVIRVSCGDEFTTAATADNH 652
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG--GAHVLALTSPSSVIGGKV 93
V+SWG G G+LG D SPQ + + + + CG G+ +L LT GKV
Sbjct: 483 VYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLT-------GKV 535
Query: 94 FSWGRGSSGQLG----------HGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVS 142
+ G +LG H + Y +T Y I IS G H+ +
Sbjct: 536 LACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAID 595
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQ 201
+ G L T G GQLG GDYR H + + K V +++CG + D N
Sbjct: 596 ERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATAD---NH 652
Query: 202 VYGFGSGKRGQLGVSKD 218
++ +G+G G+L ++ +
Sbjct: 653 IFAWGNGGNGRLAMTPN 669
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 23/234 (9%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV---SMLACGGAHVLALTSPSSVIG 90
++++WG + LG G + P+L+ + S V M+ C H + L+
Sbjct: 143 TELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLC-KFHSVFLSQ-----K 196
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V++ G G G+LGHG+ + L P+ V GH T ++ +H+ +++ G ++T
Sbjct: 197 GQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGH--PCTQVAGAKDHTVVLTEDGYVYTF 254
Query: 151 GDGTFGQLGHGDYRSHSS---PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G TF QLG +S+ ++ + K V +A G H+++ KD VY G
Sbjct: 255 GLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA----VYTVGL 310
Query: 208 GKRGQLGVSKDR--IRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
GQLG +D + VS P+ LH DI I +SA+ + +S G +Y
Sbjct: 311 NG-GQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIY 363
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L D P ++ + +ACG +HVLAL++ G++F+
Sbjct: 418 IMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALST-----DGELFA 472
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V G + G + S ++ G + CG F
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQ--RVVCGIDSSMILTSPGRVLACGSNRF 530
Query: 156 GQLGHGDYRSHSSPV------KVSSFV--------NKNVHQIACGMRHSLVLLK--DCLG 199
+LG PV + SF + + + G HS + DC
Sbjct: 531 NKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDC-- 588
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
Y FGS + GQLG S R+ P GL I++V ++ + A+ AEG +Y+W
Sbjct: 589 ---YTFGSNQHGQLGTSSRRVSRA--PCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSW 643
Query: 260 GRG 262
G+G
Sbjct: 644 GKG 646
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 157/410 (38%), Gaps = 90/410 (21%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G L L+ E V +A G +T G++
Sbjct: 320 VYAWGGGLSSPLRLPMLNTE-------------VVQVAAGRTQKAGVTR-----SGRLIL 361
Query: 96 WGRGSSGQLGHGEMVDAL-YPKP---VTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTC 150
W G G + A+ P+P F +G TI H++ G + ++D G + T
Sbjct: 362 WEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTF 421
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G+ G LGHG+ S P V + + + Q+ACG H L L D +++ +G G
Sbjct: 422 GSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTD---GELFAWGRGDG 478
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN----- 264
G+LG+ S + PQ E + D S L++ G + G FN
Sbjct: 479 GRLGLGTR--ESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLD 536
Query: 265 --STSDVNCP-QSLPSSLSFSQ-------------AALGWNHVLVLTGDGEVLMLGGSHH 308
S + P Q + +LSF+ LG H +T G+ G + H
Sbjct: 537 HLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQH 596
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
G L +S+R +S A +V L+G+K++ +A G
Sbjct: 597 GQLG-----TSSRRVSRAPCRVQGLEGIKMVMVACGDA---------------------- 629
Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGN---------TCDQIHPKVVN 409
F + V AE + +WG G G+LG + D+ HP +V
Sbjct: 630 ---FTVAVGAEGE-VYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVT 675
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 37 WSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+++G+ GQLGT +P ++ L + V M+ACG A +A+ + G+V+S
Sbjct: 589 YTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV-MVACGDAFTVAVGA-----EGEVYS 642
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
WG+G+ G+LG + DA P+PV + H Y +T +S
Sbjct: 643 WGKGTRGRLGRRDE-DAGLPRPVQLDETHPYMVTSVS 678
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 20/192 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G PQ + ++ + CG + LTSP G+V
Sbjct: 469 ELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSP-----GRVL 523
Query: 95 SWGRGSSGQLG------------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
+ G +LG + ++ +AL P+ + + + G HS ++
Sbjct: 524 ACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAIT 583
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
SG +T G GQLG R +P +V + +ACG ++ + + +V
Sbjct: 584 ASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAE---GEV 640
Query: 203 YGFGSGKRGQLG 214
Y +G G RG+LG
Sbjct: 641 YSWGKGTRGRLG 652
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGF 429
F + + IMT+G G +G LG GN D P +V LG E ++V CG+
Sbjct: 407 LFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEM------VQVACGASH 460
Query: 430 TYAIS 434
A+S
Sbjct: 461 VLALS 465
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 150/404 (37%), Gaps = 82/404 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G LGT L +LN + V +A G +T G++
Sbjct: 314 VYAWGGG----LGT-----PLRLPMLN----TEVVQVAAGRTQKAGVTR-----SGRLIL 355
Query: 96 WGRGSSGQLGHGEMVDAL-YPKP---VTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTC 150
W G G + A+ P+P F +G TI H++ G + ++D G + T
Sbjct: 356 WEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTF 415
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G+ G LGHG S P V + + + Q+ACG H L L + +++ +G G
Sbjct: 416 GSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTE---RELFAWGRGDS 472
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN----- 264
G+LG+ S S PQ E + D S L+ G G FN
Sbjct: 473 GRLGLGTR--ESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLD 530
Query: 265 --STSDVNCP-QSLPSSLSFS-------------QAALGWNHVLVLTGDGEVLMLGGSHH 308
S + P Q + +LSF+ LG H +T G+ G + H
Sbjct: 531 HLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQH 590
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPF 368
G L R S P KV L+G+K+ +A G
Sbjct: 591 GQLGTNTRRGSRAPC-----KVQGLEGIKMAMVACGDA---------------------- 623
Query: 369 FPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 412
F I + +WG G G+LG + D P+ V L +
Sbjct: 624 ----FTVAIGAESEVYSWGKGARGRLGRRDE-DAGLPRPVQLDE 662
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 20/192 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G PQ + + + CG + LT P G+
Sbjct: 463 ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVP-----GQAL 517
Query: 95 SWGRGSSGQLG------------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
+ G +LG H ++ +AL + + + I G HS V+
Sbjct: 518 ACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVT 577
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
SG +T G GQLG R +P KV + +ACG ++ + + ++V
Sbjct: 578 ASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAE---SEV 634
Query: 203 YGFGSGKRGQLG 214
Y +G G RG+LG
Sbjct: 635 YSWGKGARGRLG 646
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+++G+ GQLGT +P + ++M+ACG A +A+ + S +V+SW
Sbjct: 583 YTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAES-----EVYSW 637
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
G+G+ G+LG + DA P+PV + H YT+T +S
Sbjct: 638 GKGARGRLGRRDE-DAGLPRPVQLDETHPYTVTSVS 672
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 73/210 (34%), Gaps = 54/210 (25%)
Query: 234 DIEIVGISANGDRSAALSAEGHLYTW-----GRGFNSTSDVNCPQSLP----------SS 278
+ E+V ++A + A ++ G L W G G S Q P S
Sbjct: 331 NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSG 390
Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
++ A G LT G ++ G +G L ++P V L G ++
Sbjct: 391 VTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQP-----TIVEALLGYEM 445
Query: 339 IQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGN 398
+Q+A GA H + ++ R + WG G+ G+LGLG
Sbjct: 446 VQVACGASH--------------------------VLALSTERELFAWGRGDSGRLGLGT 479
Query: 399 TCDQIHPKVVNL--GDEFQNRDTQLEVFCG 426
P+ V + G E Q V CG
Sbjct: 480 RESHSCPQQVPMPPGQEAQR------VVCG 503
Score = 33.5 bits (75), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGF 429
FF + + IMT+G G +G LG G+ D P +V LG E ++V CG+
Sbjct: 401 FFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEM------VQVACGASH 454
Query: 430 TYAIS 434
A+S
Sbjct: 455 VLALS 459
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 122/326 (37%), Gaps = 53/326 (16%)
Query: 130 HISAGWNHSGFVSDSGCLFTC-----GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+ AG H V+ L+T G GQLGHGD S+ P V K + Q++
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 432
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
CG ++ + + Q+Y FGS G +GV K V P + +S
Sbjct: 433 CGDDFTVCVTDE---GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGD 489
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTG 296
+ L+ +Y+WG G +S D PQ +P +L G + +LT
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 297 DGEVLMLGGSHHGMLSDPERVSST--------RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
G+VL G + L + +S P + + L K+ IA G H+
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHT 609
Query: 349 AVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 408
A I E ++T+G + GQLG+GN ++ +
Sbjct: 610 A--------------------------AIDERGRLLTFGCNKCGQLGVGNYKKRLGINL- 642
Query: 409 NLGDEFQNRDTQLEVFCGSGFTYAIS 434
LG + + V CG FT A +
Sbjct: 643 -LGGPLGGKQV-IRVSCGDEFTIAAT 666
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 142/355 (40%), Gaps = 65/355 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG G +PQ L+ + S S + G H +T + ++
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVT-----VEKEL 390
Query: 94 FSW-----GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
++W G GQLGHG+ PK V G I +S G + + V+D G L+
Sbjct: 391 YTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIRQVSCGDDFTVCVTDEGQLY 448
Query: 149 TCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
G +G +G P++++ F++ V Q++CG H +VL ++ +VY +G
Sbjct: 449 AFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRN---KEVYSWG 505
Query: 207 SGKRGQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-R 261
G+ G+LG+ + + V +P+ I IV + D + L+ G + G
Sbjct: 506 CGEYGRLGLDSEEDYYTPQKVDVPKALI------IVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 262 GFNSTSDVNCP---------QSLPSSLSFSQA-----------ALGWNHVLVLTGDGEVL 301
FN C +P + SF+ A A G H + G +L
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
G + G L + + L + L L G +VI+++ G E + T H
Sbjct: 620 TFGCNKCGQLG---VGNYKKRLGINLLG-GPLGGKQVIRVSCGDEFTIAATDDNH 670
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 26/245 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLH--DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G+ G +G ++ + L P LN + V ++CG HV+ LT +
Sbjct: 446 QLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR-----NKE 500
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG D P+ V I + G + + ++ SG + CG
Sbjct: 501 VYSWGCGEYGRLGLDSEEDYYTPQKVDVPKA--LIIVAVQCGCDGTFLLTQSGKVLACGL 558
Query: 153 GTFGQLGHGDYRS--------HSSPVKVSSFVNK-----NVHQIACGMRHSLVLLKDCLG 199
F +LG S H P S + K + IA G H+ + +
Sbjct: 559 NEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDER--- 615
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
++ FG K GQLGV + R + + + L +++ +S + + A + + H++ W
Sbjct: 616 GRLLTFGCNKCGQLGVGNYKKR-LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 260 GRGFN 264
G G N
Sbjct: 675 GNGGN 679
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 20/194 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG D +PQ +++ + + CG LT GKV
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ-----SGKVL 554
Query: 95 SWGRGSSGQLGHGEMVDALY--------PKPVTFFDGHR---YTITHISAGWNHSGFVSD 143
+ G +LG + + + P +F + Y I I+ G H+ + +
Sbjct: 555 ACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQV 202
G L T G GQLG G+Y+ + + K V +++CG ++ D N +
Sbjct: 615 RGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHI 671
Query: 203 YGFGSGKRGQLGVS 216
+ +G+G G+L ++
Sbjct: 672 FAWGNGGNGRLAMT 685
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 43/196 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L EL P+LL +++ +A GG H + ++ G ++
Sbjct: 178 QVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSE-----TGDIY 232
Query: 95 SWGRGSSGQLG--------HGEMVD----------------------------ALYPKPV 118
WG SGQL GE V A+ P P
Sbjct: 233 IWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPA 292
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
+S G H+ V+ +G L+T G G +GQLGH D S P +V FV+K
Sbjct: 293 LLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDK 352
Query: 179 --NVHQIACGMRHSLV 192
V + CG ++ V
Sbjct: 353 QLQVKAVTCGPWNTYV 368
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 52/276 (18%)
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
Y S P Q+ G H+L+L D G QV+ +G G+ GQLG + +
Sbjct: 143 YVSPRPPFYRPLAPELRARQLELGAEHALLL--DAAG-QVFSWGGGRHGQLG--HGTLEA 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSLS 280
P++ L + + ++A G S +S G +Y WG +N + + P +
Sbjct: 198 ELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWG--WNESGQLALPTRNLAEDGET 255
Query: 281 FSQAALGWNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
++ A G N DG +V G G P + +P L+ D VKV
Sbjct: 256 VAREATGLNE------DGSQVKRTGRVEDGA---PAPFIAVQPFPALLDLPLGSDAVKV- 305
Query: 340 QIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNT 399
+ G+ H+AVVT + TWGWG++GQLG +T
Sbjct: 306 --SCGSRHTAVVT--------------------------RTGELYTWGWGKYGQLGHEDT 337
Query: 400 CDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 434
P+ V F ++ Q++ V CG TY +
Sbjct: 338 TSLDWPRRVEY---FVDKQLQVKAVTCGPWNTYVYA 370
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 52 LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
+ L+P+L L G H L L + G+VFSWG G GQLGHG +
Sbjct: 150 FYRPLAPEL-------RARQLELGAEHALLLDA-----AGQVFSWGGGRHGQLGHGTLEA 197
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
L P+ + G T+ ++AG HS VS++G ++ G GQL + P +
Sbjct: 198 ELEPRLLEALQG--LTMAEVAAGGWHSVCVSETGDIYIWGWNESGQL--------ALPTR 247
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
+ + V + A G+ G+QV G R + G I P +
Sbjct: 248 NLAEDGETVAREATGLNED--------GSQVKRTG---RVEDGAPAPFIAVQPFPALLDL 296
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ V +S +A ++ G LYTWG G
Sbjct: 297 PLGSDAVKVSCGSRHTAVVTRTGELYTWGWG 327
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 49 TGRLHD---------ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
TGR+ D + P LL+L S ++CG H +T G++++WG G
Sbjct: 273 TGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTR-----TGELYTWGWG 327
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-WNHSGFVSDSG 145
GQLGH + +P+ V +F + + ++ G WN + + G
Sbjct: 328 KYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKG 374
>sp|O42645|YF94_SCHPO RCC1 repeat-containing protein C10F6.04 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC10F6.04 PE=4 SV=1
Length = 351
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 165/389 (42%), Gaps = 80/389 (20%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
S G+ + QLG D SPQ++ ++ ++CGG H L L S ++++ G
Sbjct: 4 SLGSNGNFQLGLNNDEDVYSPQIVPFDR--AIEKISCGGNHTLLLDEDS-----QLWACG 56
Query: 98 RGSSGQLGHGEMVDALY----PKPVTFFD--GHRYTITHISAGWNHSGFV-SDSGCLFTC 150
GQ G+ E+ + LY P + F H + ++ GW S V +D + +C
Sbjct: 57 DNRKGQCGY-EVKEPLYNPLSPDYLRIFTRVSHERWV-FLTCGWEFSVIVHADRRRVCSC 114
Query: 151 GDGTFGQLGHGDYRSHSS---PVKVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFG 206
G+G G+LG G+ RS+S + + +K + I+ G+RH + + + GN +YG G
Sbjct: 115 GEGLSGELGQGN-RSNSQGLREIDIPYLDDKEFIIDISAGLRHWICVTNE--GN-LYGCG 170
Query: 207 SGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWG-RGF 263
G++GQLG V + VS L IE G + SA L GH+ G +
Sbjct: 171 DGRKGQLGPVVMKTVNKVSF------LGRIEHAQAVVCGVQFSAVLQETGHVIVLGGEKW 224
Query: 264 NSTSDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N ++ + Q+ S LS S ++ W+ + +L+ +G V G D + + T+
Sbjct: 225 NVAAECDAWQANNSELSSSICSISANWSTLSLLSTEGCVYAFG------RCDRAQKAHTK 278
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENR 381
++QIA+G EH+ + T K
Sbjct: 279 -------------ASDIVQIASGTEHNILRTKK--------------------------G 299
Query: 382 AIMTWGWGEHGQLGLGNTCDQIHPKVVNL 410
+++ +GW EHG + D K + L
Sbjct: 300 SVLIYGWNEHGNASNDDKRDVYDAKTLQL 328
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 143/335 (42%), Gaps = 48/335 (14%)
Query: 35 KVWSWGAGTDGQLG---TGRLHDELSPQLLNLSSLSSVS---MLACGGAHVLALTSPSSV 88
++W+ G GQ G L++ LSP L + + S L CG + + +
Sbjct: 51 QLWACGDNRKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRR- 109
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+V S G G SG+LG G ++ L + + D + I ISAG H V++ G
Sbjct: 110 ---RVCSCGEGLSGELGQGNRSNSQGLREIDIPYLDDKEFIID-ISAGLRHWICVTNEGN 165
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYG 204
L+ CGDG GQLG ++ V SF+ + H + CG++ S VL + V
Sbjct: 166 LYGCGDGRKGQLGPVVMKT----VNKVSFLGRIEHAQAVVCGVQFSAVLQET---GHVIV 218
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G G++ + D ++ + + I ISAN + LS EG +Y +GR
Sbjct: 219 LG-GEKWNVAAECDAWQANNSELSS------SICSISANWSTLSLLSTEGCVYAFGR--- 268
Query: 265 STSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
C ++ + S Q A G H ++ T G VL+ G + HG S+ ++
Sbjct: 269 ------CDRAQKAHTKASDIVQIASGTEHNILRTKKGSVLIYGWNEHGNASNDDK----- 317
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFH 356
V K L G I +AAG S +V + H
Sbjct: 318 -RDVYDAKTLQLPGWAYI-VAAGYATSWIVIEENH 350
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 177/465 (38%), Gaps = 113/465 (24%)
Query: 32 QVVKVWSWGAGTDGQLGTGRL--HDELSPQLLNL---SSLSSVSMLACGGAHVLALTSPS 86
Q + ++ WG G+ +LG G L + E+ LN + + A GG H LAL S
Sbjct: 44 QPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEES 103
Query: 87 SVIGGKVFSWGRGSSGQLGHG---------------------------EMVDALYPKPV- 118
+V +SWG G LG E A P+
Sbjct: 104 NV-----WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESF 158
Query: 119 -TFFDGHRYTITHISAGWNHSGFVSDSGCL-----FTCGDGTFGQLGHGDYRSHSSPVKV 172
+GH+ + ++A N S + +G + F C +G G + +P KV
Sbjct: 159 PPLAEGHK--VVQLAATDNMSCALFSNGEVYAWGTFRCNEGILG-FYQDKIKIQKTPWKV 215
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSLPQVTIG 231
+F N+ Q+A G H L L ++ + V+ +G+G++ QLG +R R +L G
Sbjct: 216 PTFSKYNIVQLAPGKDHILFLDEEGM---VFAWGNGQQNQLGRKVMERFRLKTLDPRPFG 272
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQ--SLPSSL 279
L ++ + N AL+ + L +WG + V P+ +LP ++
Sbjct: 273 LRHVKYIASGEN--HCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV 330
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHH---GMLSD--PERV-------SSTRPLSVAL 327
A G +H L+L+ DG++ G G+ D PE + PL L
Sbjct: 331 VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKL 390
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWG 387
V K +AAG+ HS V A+N +WG
Sbjct: 391 NNVP-----KFKSVAAGSHHSVAV--------------------------AQNGIAYSWG 419
Query: 388 WGEHGQLGLGNTCD--QIHPKVVNLGDEFQNRDTQLEVFCGSGFT 430
+GE +GLG D ++ ++ N + N + V CG F+
Sbjct: 420 FGETYAVGLGPFEDDTEVPTRIKNTATQDHN---IILVGCGGQFS 461
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 80/196 (40%), Gaps = 43/196 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L EL P+LL ++ +A GG H + ++ G ++
Sbjct: 178 QVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET-----GDIY 232
Query: 95 SWGRGSSGQLG--------HGEMVD----------------------------ALYPKPV 118
WG SGQL GE V A+ P P
Sbjct: 233 IWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPA 292
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
S G H+ V+ +G L+T G G +GQLGH D S P +V FV+K
Sbjct: 293 LLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDK 352
Query: 179 --NVHQIACGMRHSLV 192
V + CG ++ V
Sbjct: 353 QLQVKAVTCGPWNTYV 368
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 108/271 (39%), Gaps = 48/271 (17%)
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
Y S +P Q+ G H+L+L D G QV+ +G G+ GQLG + +
Sbjct: 143 YVSPRAPFYRPLAPELRARQLELGAEHALLL--DAAG-QVFSWGGGRHGQLG--HGTLEA 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFS 282
P++ L + + ++A G S +S G +Y WG +N + + +LP+
Sbjct: 198 ELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG--WNESGQL----ALPTRNLAE 251
Query: 283 QAALGWNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
L DG +V GG+ G P + +P L+ D VK
Sbjct: 252 DGETVAREATELNEDGSQVKRTGGAEDGA---PAPFIAVQPFPALLDLPMGSDAVKA--- 305
Query: 342 AAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCD 401
+ G+ H+AVVT + TWGWG++GQLG +T
Sbjct: 306 SCGSRHTAVVT--------------------------RTGELYTWGWGKYGQLGHEDTTS 339
Query: 402 QIHPKVVNLGDEFQNRDTQLE-VFCGSGFTY 431
P+ V F ++ Q++ V CG TY
Sbjct: 340 LDRPRRVEY---FVDKQLQVKAVTCGPWNTY 367
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 85/214 (39%), Gaps = 59/214 (27%)
Query: 52 LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
+ L+P+L L G H L L + G+VFSWG G GQLGHG +
Sbjct: 150 FYRPLAPEL-------RARQLELGAEHALLLDA-----AGQVFSWGGGRHGQLGHGTLEA 197
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL------------- 158
L P+ + G + ++AG HS VS++G ++ G GQL
Sbjct: 198 ELEPRLLEALQG--LVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGET 255
Query: 159 ------------------GHGDYRSHSSPVKVSSF-------VNKNVHQIACGMRHSLVL 193
G + + + + V F + + + +CG RH+ V+
Sbjct: 256 VAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVV 315
Query: 194 LKDCLGNQVYGFGSGKRGQLG----VSKDRIRSV 223
+ ++Y +G GK GQLG S DR R V
Sbjct: 316 TRT---GELYTWGWGKYGQLGHEDTTSLDRPRRV 346
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 11/196 (5%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
+ G H+ + +G +F+ G G GQLGHG + P + + + ++A G H
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
S+ + + +Y +G + GQL + R+++ T+ E+ N D S
Sbjct: 222 SVCVSET---GDIYIWGWNESGQLALP---TRNLAEDGETVAREATEL-----NEDGSQV 270
Query: 250 LSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
G F + LP +A+ G H V+T GE+ G +G
Sbjct: 271 KRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYG 330
Query: 310 MLSDPERVSSTRPLSV 325
L + S RP V
Sbjct: 331 QLGHEDTTSLDRPRRV 346
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P LL+L S +CG H +T G++++WG G GQLGH + P+
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRT-----GELYTWGWGKYGQLGHEDTTSLDRPRR 345
Query: 118 VTFFDGHRYTITHISAG-WNHSGFVSDSG 145
V +F + + ++ G WN + + G
Sbjct: 346 VEYFVDKQLQVKAVTCGPWNTYVYAVEKG 374
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG ++ LGHG +P+ V F I + HS F+S G ++TCG
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRG 211
G G+LGHGD ++ P V N Q+A H++VL +D C VY FG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGC----VYTFGLNIFH 259
Query: 212 QLGV 215
QLG+
Sbjct: 260 QLGI 263
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGKV 93
V++WG T+ LG G + + P+L++L S S + + + H + L+ G+V
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQ-----KGQV 198
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G G G+LGHG+ L P+ V +GH + ++A +H+ +++ GC++T G
Sbjct: 199 YTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH--NCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 154 TFGQLGHGDYRSHSS---PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
F QLG S + ++ + + +A G H+++ ++ VY G
Sbjct: 257 IFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA----VYTMGLNG- 311
Query: 211 GQLGVSKDR--IRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
GQLG D + V+ P+ LH DI + ++A+ + ++ G +Y
Sbjct: 312 GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLL------- 364
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHV 291
+D C + L+ + + H+
Sbjct: 365 ADYQCKKMASKQLNLKKVLVSGGHM 389
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 28/226 (12%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLG 199
+D ++T GD T LGHG S P V F ++ Q+ HS+ L +
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQ---K 195
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
QVY G G G+LG + ++ +P++ GL+ ++A D + L+ +G +YT+
Sbjct: 196 GQVYTCGHGPGGRLGHGDE--QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 260 GRG-------FNSTSDVNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLM-LGGSH 307
G S N P+ + + + A G H ++ T + M L G
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLNGGQ 313
Query: 308 HGMLSD---------PERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
G L D P +VS+ +AL V+ DG V G
Sbjct: 314 LGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRG 359
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 78/194 (40%), Gaps = 41/194 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWGAG GQLG G L EL P+LL ++ +A GG H + L+ G ++
Sbjct: 181 QVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSET-----GDIY 235
Query: 95 SWGRGSSGQLG------------------------HGEMVDALYPKPVTFFDGHRYT--- 127
WG SGQL E+ A P F +
Sbjct: 236 IWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALL 295
Query: 128 -------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN- 179
S G H+ V+ +G L+T G G +GQLGH D S P V FV +
Sbjct: 296 DLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQL 355
Query: 180 -VHQIACGMRHSLV 192
V + CG ++ V
Sbjct: 356 EVRAVTCGPWNTYV 369
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 53/195 (27%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
L+P+L V L G HVL L + G+VFSWG G GQLGHG + L P
Sbjct: 157 LAPEL-------RVRQLELGAEHVLLLCA-----AGQVFSWGAGRHGQLGHGTLEAELEP 204
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG------------------------ 151
+ + G R + ++AG HS +S++G ++ G
Sbjct: 205 RLLEALQGLR--MAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEA 262
Query: 152 -----DGTFGQLGHGDYRSHSSPVKVSSF-------VNKNVHQIACGMRHSLVLLKDCLG 199
DG +L D + + + + F + + +CG RH+ V+ +
Sbjct: 263 TELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRT--- 319
Query: 200 NQVYGFGSGKRGQLG 214
++Y +G GK GQLG
Sbjct: 320 GELYTWGWGKYGQLG 334
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 98/278 (35%), Gaps = 86/278 (30%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
V Q+ G H L+L C QV+ +G+G+ GQLG + + P++ L + +
Sbjct: 162 RVRQLELGAEHVLLL---CAAGQVFSWGAGRHGQLG--HGTLEAELEPRLLEALQGLRMA 216
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
++A GW H + L+ G
Sbjct: 217 KVAAG-------------------------------------------GW-HSVCLSETG 232
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWV 358
++ + G + G L+ P R + N DG+K A A A
Sbjct: 233 DIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPA--------- 283
Query: 359 RLFIISYTPFFPPFFINVIAENRAIM------------------TWGWGEHGQLGLGNTC 400
I+ PF P +++ + A+M TWGWG++GQLG ++
Sbjct: 284 --HFIAIQPF--PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDST 339
Query: 401 DQIHPKVVNLGDEFQNRDTQLE-VFCG--SGFTYAISR 435
P V F R ++ V CG + + YA+ R
Sbjct: 340 SLDRPCCVEY---FVERQLEVRAVTCGPWNTYVYAMER 374
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 45/124 (36%), Gaps = 31/124 (25%)
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
Q L L Q LG HVL+L G+V G HG L + P +
Sbjct: 155 QPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEP-----RLLEA 209
Query: 333 LDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHG 392
L G+++ ++AAG HS ++E I WGW E G
Sbjct: 210 LQGLRMAKVAAGGWHSV--------------------------CLSETGDIYIWGWNESG 243
Query: 393 QLGL 396
QL L
Sbjct: 244 QLAL 247
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 15/199 (7%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ + G H + +G +F+ G G GQLGHG + P + + + ++A G
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGG 222
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS+ L + +Y +G + GQL + ++ + + + L++ + A D
Sbjct: 223 WHSVCLSET---GDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADA 279
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
A F + LP A+ G H V+T GE+ G
Sbjct: 280 GAPAH-----------FIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWG 328
Query: 307 HHGMLSDPERVSSTRPLSV 325
+G L + S RP V
Sbjct: 329 KYGQLGHKDSTSLDRPCCV 347
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 177/435 (40%), Gaps = 89/435 (20%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V + G G GQLG G + + P L+ L+ + A GG H + L + G +
Sbjct: 42 QVLTLGQGDVGQLGLGEDIMERKKPALVTLTE--DIVQAAAGGMHTVCLGAS-----GSI 94
Query: 94 FSWGRGSSGQLGH--GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+++G G LG E + P V + + +SAG +H+ +++ G +F G
Sbjct: 95 YTFGCNDEGALGRDTSEEGSEMQPGKVELAE----KVVQVSAGDSHTAALTEDGRVFVFG 150
Query: 152 -----DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+G G L + PV+V +N V +IA G H ++L D +Y G
Sbjct: 151 SFRDNNGVIGLLE--PMKKSMVPVQVQ--INTPVIKIASGNDHLVLLTVD---GDLYTSG 203
Query: 207 SGKRGQLGVSKDR---------IRSVSLPQV----TIGLHDIEIVGISANGDRSAALSAE 253
G++GQLG +R + + +PQ G + + + A+S E
Sbjct: 204 CGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQE 263
Query: 254 GHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN----HVLVLTGDGEVLML 303
GH+Y +G G +T PQ+L S + +++ +G++ H + + +G+ L
Sbjct: 264 GHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSL 323
Query: 304 GGSHHGML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRL 360
G + +G L + E S P+ D K+ +A+GA
Sbjct: 324 GRAEYGRLGLGENAEEQSEPTPIP---------DLPKINSVASGAS-------------- 360
Query: 361 FIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 420
+SY ++ + + WG G + QLG G D P+ + G ++R+
Sbjct: 361 --VSY----------AVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMT-GKHLEDREV- 406
Query: 421 LEVFCGSGFTYAISR 435
L V G T + R
Sbjct: 407 LSVSSGGQHTVLLVR 421
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 82 LTSPS-SVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T PS +GG+V + G+G GQLG GE +++ P VT + I +AG H+
Sbjct: 31 VTHPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTE----DIVQAAAGGMHTV 86
Query: 140 FVSDSGCLFTCGDGTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
+ SG ++T G G LG + S P KV + + V Q++ G H+ L +D
Sbjct: 87 CLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE--LAEKVVQVSAGDSHTAALTED- 143
Query: 198 LGNQVYGFGSGK--RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+V+ FGS + G +G+ + +S+ QV I + ++ I++ D L+ +G
Sbjct: 144 --GRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQI---NTPVIKIASGNDHLVLLTVDGD 198
Query: 256 LYTWGRG 262
LYT G G
Sbjct: 199 LYTSGCG 205
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 39/268 (14%)
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG--NQ 201
G + T G G GQLG G D P V+ + +++ Q A G H++ CLG
Sbjct: 41 GQVLTLGQGDVGQLGLGEDIMERKKPALVT--LTEDIVQAAAGGMHTV-----CLGASGS 93
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+Y FG G LG S P + L + ++V +SA +AAL+ +G ++ +G
Sbjct: 94 IYTFGCNDEGALGRDTSEEGSEMQPG-KVELAE-KVVQVSAGDSHTAALTEDGRVFVFGS 151
Query: 262 GFNSTSDVNCPQSLPSSLSFSQA---------ALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
++ + + + S+ Q A G +H+++LT DG++ G G L
Sbjct: 152 FRDNNGVIGLLEPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLG 211
Query: 313 D-PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
PER ++ G++ + + A +G+ H+ +F +Y
Sbjct: 212 RVPERFTNR----------GGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAY------ 255
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNT 399
F +++ + +G + QLG NT
Sbjct: 256 -FTFAVSQEGHVYGFGLSNYHQLGTKNT 282
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 56/260 (21%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+G QV G G GQLG+ +D + VT+ +IV +A G + L A G +Y
Sbjct: 39 VGGQVLTLGQGDVGQLGLGEDIMERKKPALVTL---TEDIVQAAAGGMHTVCLGASGSIY 95
Query: 258 TWG--------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG--SH 307
T+G R + P + + Q + G +H LT DG V + G +
Sbjct: 96 TFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDN 155
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTP 367
+G++ E P+ ++ V VI+IA+G +H ++T
Sbjct: 156 NGVIGLLE------PMKKSMVPVQVQINTPVIKIASGNDHLVLLT--------------- 194
Query: 368 FFPPFFINVIAENRAIMTWGWGEHGQLG-----LGNTCDQ------IHPKVVNLGDEFQN 416
+ + T G GE GQLG N + + P+ ++L +
Sbjct: 195 -----------VDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSG 243
Query: 417 RDTQLEVFCGSGFTYAISRH 436
R +VFCG+ FT+A+S+
Sbjct: 244 RVHFQDVFCGAYFTFAVSQE 263
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSS 87
V++WG GT+ QLGTG D SP+ + L +L+ GG H + L S
Sbjct: 371 VFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLVRKRS 424
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 174/437 (39%), Gaps = 83/437 (18%)
Query: 13 KSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSM 71
+ A+ + K K+ + + V + G G GQLG G + + P L+ L L V
Sbjct: 14 EDAIPKSKKVKVSHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPL--LQDVVQ 71
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTIT 129
GG H + L G+V+S+G G LG V+ + P V + +
Sbjct: 72 AEAGGMHTVCLNQ-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL----QEKVV 122
Query: 130 HISAGWNHSGFVSDSGCLFTCG-----DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+SAG +H+ +++ G +F G +G G L + PV+V ++ V ++A
Sbjct: 123 QVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE--PMKKSMVPVQVQ--LDMPVVKVA 178
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
G H ++L D +Y G G++GQLG + + Q L + V + + G
Sbjct: 179 SGNDHLVMLTTD---GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRG 235
Query: 245 DR--------------SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA 284
R + A+S EGH+Y +G G T+ PQ+L S + +++
Sbjct: 236 SRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKS 295
Query: 285 ALGWN----HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+G++ H + + +G+ LG + +G L
Sbjct: 296 WVGFSGGQHHTICMDSEGKAYSLGRAEYGRLG---------------------------- 327
Query: 341 IAAGAEHSAVVTGKFHWVRLFIISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTC 400
+ GAE ++ T RL ++S V + R + WG G + QLG G
Sbjct: 328 LGEGAEEKSIPT---LISRLPVVSSVACGASVGYAVSKDGR-VFAWGMGTNYQLGTGQDE 383
Query: 401 DQIHPKVVNLGDEFQNR 417
D P V G + +NR
Sbjct: 384 DAWSP-VEMTGKQLENR 399
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K +S G G+LG G +E S L +S L VS +ACG + A++ G+VF
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTL-ISRLPVVSSVACGASVGYAVSKD-----GRVF 367
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
+WG G++ QLG G+ DA P +T + +S+G H+
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHT 411
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPSSVIGG 91
V+ +G QLGT PQ NL+S + + + G H + + S G
Sbjct: 261 VYGFGLSNYHQLGTPGTASCFIPQ--NLTSFKNSTKSWVGFSGGQHHTICMDSE-----G 313
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K +S GR G+LG GE + K + ++ ++ G + VS G +F G
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEE---KSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWG 370
Query: 152 DGTFGQLGHGDYRSHSSPVKVS--SFVNKNVHQIACGMRHSLVLLKD 196
GT QLG G SPV+++ N+ V ++ G +H+++L+KD
Sbjct: 371 MGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 102/259 (39%), Gaps = 61/259 (23%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ + + P + L D+ V A G + L+ G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKK-PALVPLLQDV--VQAEAGGMHTVCLNQSGQVYSFGC 93
Query: 261 ---RGFNSTSDVNCPQSLPSSLSFS----QAALGWNHVLVLTGDGEVLMLGG--SHHGM- 310
+ V + +P + Q + G +H LT DG V + G ++G+
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI 153
Query: 311 -LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFF 369
L +P + S P+ V L+ + V+++A+G +H ++T
Sbjct: 154 GLLEPMK-KSMVPVQVQLD-------MPVVKVASGNDHLVMLT----------------- 188
Query: 370 PPFFINVIAENRAIMTWGWGEHGQLG-----LGNTCDQ------IHPKVVNLGDE-FQNR 417
+ + T G GE GQLG N + + PK V L + R
Sbjct: 189 ---------TDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGR 239
Query: 418 DTQLEVFCGSGFTYAISRH 436
+ FCG+ T+AISR
Sbjct: 240 VRFQDAFCGAYLTFAISRE 258
>sp|Q96Q42|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=2
Length = 1657
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 7 EETEKGK--SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLS 64
+E+ +GK S+L++ I EEE E G +L L ++SP+LL +
Sbjct: 456 QESMQGKKSSSLVD-----IREEETE-----------GGSRRLSLPGLLSQVSPRLLRKA 499
Query: 65 SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
+ + + + + +V++WG+G GQLGHG+++ L P V DG
Sbjct: 500 ARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK 559
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV-KVSSFVNKNVHQI 183
+ H+ AG HS ++ +++ G TFGQLGH D+ + + K+SS V I
Sbjct: 560 E--VIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKISS--ENGVWSI 615
Query: 184 ACGMRHSLVLL 194
A G +SL L+
Sbjct: 616 AAGRDYSLFLV 626
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+WG G +GQLG G + L P + V L GG H LALT+ S +V
Sbjct: 526 TEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS-----QV 580
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
+SWG + GQLGH + + P + I+AG ++S F+ D+
Sbjct: 581 YSWGSNTFGQLGHSDFPTTV---PRLAKISSENGVWSIAAGRDYSLFLVDT 628
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 106/267 (39%), Gaps = 54/267 (20%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++T G G GQLGHGD P+ V K V + G HSL L +QVY +G
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAK---SQVYSWG 584
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----SAEGHLYTWGRG 262
S GQLG S ++P++ + + I+A D S L + LY GR
Sbjct: 585 SNTFGQLGHSD---FPTTVPRLAKISSENGVWSIAAGRDYSLFLVDTEDFQPGLYYSGRQ 641
Query: 263 FNSTSDVNCPQS-----LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ D N P++ P LS S+ G + L L D ++ S H +
Sbjct: 642 DPTEGD-NLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLALV-DKNIMGYIASLHELA 699
Query: 312 SDPERVSST---------RPLSVALEKVSNLDGVKVIQIAAG---------AEHSAVVTG 353
+ R S RPL ++LE + V+++Q A +H A ++
Sbjct: 700 TTERRFYSKLSDIKSQILRPL-LSLENLGTTTTVQLLQEVASRFSKLCYLIGQHGASLSS 758
Query: 354 KFHWVR------------LFIISYTPF 368
H V+ LF+ SYT +
Sbjct: 759 FLHGVKEARSLVILKHSSLFLDSYTEY 785
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 34/199 (17%)
Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS--GKRGQLGVSKDRIRSVSL 225
+P ++ + K V Q A G++H ++L +D +VY FG+ + G + + S
Sbjct: 31 TPERLPGWGGKTVLQAALGVKHGVLLTED---GEVYSFGTLPWRSGPVEICP------SS 81
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----CPQSLPSSLSF 281
P + L ++ ++ S A++ G Y WG V P+ P S++
Sbjct: 82 PILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIAD 141
Query: 282 SQA-----------ALGWNHVLVLTGDGEVLMLG-GSHHGMLSDPERVSSTRPLSVALEK 329
S+A A G H L L+ E+ G G G+++ V T+P +K
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPV--TKP-----QK 194
Query: 330 VSNLDGVKVIQIAAGAEHS 348
V +L G V+Q+A GA HS
Sbjct: 195 VEHLAGRVVLQVACGAFHS 213
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 14/151 (9%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
SP L N V +A G H A+T G + WG S+GQ P
Sbjct: 81 SPILENALVGQYVITVATGSFHSGAVTD-----NGVAYMWGENSAGQCAVANQQYVPEPN 135
Query: 117 PVTFFDGHR-----YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPV 170
PV+ D I ++ G H+ +S S ++ G G QLG + P
Sbjct: 136 PVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQ 193
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
KV + V Q+ACG HSL L++ CL +Q
Sbjct: 194 KVEHLAGRVVLQVACGAFHSLALVQ-CLPSQ 223
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 42/201 (20%)
Query: 250 LSAEGHLYTWGRGFNSTSDVN-CPQS--LPSSL---SFSQAALGWNHVLVLTGDGEVLML 303
L+ +G +Y++G + V CP S L ++L A G H +T +G M
Sbjct: 56 LTEDGEVYSFGTLPWRSGPVEICPSSPILENALVGQYVITVATGSFHSGAVTDNGVAYMW 115
Query: 304 GGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
G + G +++ + V P+S+A + S L V+++Q+A G EH+
Sbjct: 116 GENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLA----------- 164
Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQ 420
++ +R I W WG QLGL T + P+ V E
Sbjct: 165 ---------------LSISREI--WAWGTGCQLGLITTAFPVTKPQKV----EHLAGRVV 203
Query: 421 LEVFCGSGFTYAISRHCLPSQ 441
L+V CG+ + A+ + CLPSQ
Sbjct: 204 LQVACGAFHSLALVQ-CLPSQ 223
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 524 LRTEVWTWGKGKEGQLG-HGDVLPRLQ-PLCVKCLDGKEVIHLEAGGYHSLALTAKSQVY 581
Query: 258 TWGRG-FNSTSDVNCPQSLP 276
+WG F + P ++P
Sbjct: 582 SWGSNTFGQLGHSDFPTTVP 601
>sp|Q5BIW4|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1
Length = 1657
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 7 EETEKGK--SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLS 64
+E+ +GK S+L++ I EEE E G +L L ++SP+LL +
Sbjct: 456 QESMQGKKSSSLVD-----IREEETE-----------GGSRRLSLPGLLSQVSPRLLRKA 499
Query: 65 SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
+ + + + + +V++WG+G GQLGHG+++ L P V DG
Sbjct: 500 ARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGK 559
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV-KVSSFVNKNVHQI 183
+ H+ AG HS ++ +++ G TFGQLGH D+ + + K+SS V +
Sbjct: 560 E--VIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVPRLAKISS--ENGVWSV 615
Query: 184 ACGMRHSLVLL 194
A G +SL L+
Sbjct: 616 AAGRDYSLFLV 626
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 34/199 (17%)
Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS--GKRGQLGVSKDRIRSVSL 225
+P ++ + K V Q A G++H ++L +D +VY FG+ + G + + S
Sbjct: 31 TPERLPGWGGKTVLQAALGVKHGVLLTED---GEVYSFGTLPWRSGPVEICP------SS 81
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----CPQSLPSSLSF 281
P + L +V ++ S A++ G Y WG V P+ P S++
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIAD 141
Query: 282 SQA-----------ALGWNHVLVLTGDGEVLMLG-GSHHGMLSDPERVSSTRPLSVALEK 329
S+A A G H L L+ E+ G G G+++ V T+P +K
Sbjct: 142 SEASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPV--TKP-----QK 194
Query: 330 VSNLDGVKVIQIAAGAEHS 348
V +L G V+Q+A GA HS
Sbjct: 195 VEHLAGRVVLQVACGAFHS 213
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 14/151 (9%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
SP L N V +A G H A+T G + WG S+GQ P
Sbjct: 81 SPILENALVGQYVVTVATGSFHSGAVTD-----NGVAYMWGENSAGQCAVANQQYVPEPN 135
Query: 117 PVTFFDGHR-----YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPV 170
PV+ D I ++ G H+ +S S ++ G G QLG + P
Sbjct: 136 PVSIADSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQ 193
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
KV + V Q+ACG HSL L++ CL +Q
Sbjct: 194 KVEHLAGRVVLQVACGAFHSLALVQ-CLPSQ 223
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 42/201 (20%)
Query: 250 LSAEGHLYTWGRGFNSTSDVN-CPQS--LPSSL---SFSQAALGWNHVLVLTGDGEVLML 303
L+ +G +Y++G + V CP S L ++L A G H +T +G M
Sbjct: 56 LTEDGEVYSFGTLPWRSGPVEICPSSPILENALVGQYVVTVATGSFHSGAVTDNGVAYMW 115
Query: 304 GGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
G + G +++ + V P+S+A + S L V+++Q+A G EH+
Sbjct: 116 GENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEHTLA----------- 164
Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQ 420
++ +R I W WG QLGL T + P+ V E
Sbjct: 165 ---------------LSISREI--WAWGTGCQLGLITTAFPVTKPQKV----EHLAGRVV 203
Query: 421 LEVFCGSGFTYAISRHCLPSQ 441
L+V CG+ + A+ + CLPSQ
Sbjct: 204 LQVACGAFHSLALVQ-CLPSQ 223
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 524 LRTEVWTWGKGKEGQLG-HGDVLPRLQ-PLCVKCLDGKEVIHLEAGGYHSLALTAKSQVY 581
Query: 258 TWGRG-FNSTSDVNCPQSLP 276
+WG F + P ++P
Sbjct: 582 SWGSNTFGQLGHSDFPTTVP 601
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + H+ AG +HS ++ +++ G
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE--VIHLEAGGSHSLALTAKSQVYSWG 578
Query: 152 DGTFGQLGHGDYRSHSSPV-KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
TFGQLGH ++ + + KVSS V +A G +SL L+ D Q + SG+
Sbjct: 579 SNTFGQLGHSEFPTTVPRLSKVSS--ENGVWSVAAGQDYSLFLV-DTEDFQPGLYYSGR- 634
Query: 211 GQLGVSKDRIRSVSLPQ 227
+DR +LP+
Sbjct: 635 ------QDRAEGDTLPE 645
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+WG G +GQLG G + L P + V L GG+H LALT+ S +V
Sbjct: 520 TEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS-----QV 574
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDS 144
+SWG + GQLGH E +P V + ++AG ++S F+ D+
Sbjct: 575 YSWGSNTFGQLGHSE-----FPTTVPRLSKVSSENGVWSVAAGQDYSLFLVDT 622
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 38/201 (18%)
Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS----GKRGQLGVSKDRIRSV 223
+P ++ + K V Q A G+RH ++L +D +VY FG+ + ++ S + S
Sbjct: 31 TPERLPGWGGKTVLQAALGVRHGVLLTED---GEVYSFGTLPWKSESAEICPSSPLLESA 87
Query: 224 SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----CPQSLPSSL 279
+G H ++ ++ S A++ G +Y WG V P+ P S+
Sbjct: 88 -----LVGHH---VITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSI 139
Query: 280 SFS-----------QAALGWNHVLVLTGDGEVLMLG-GSHHGMLSDPERVSSTRPLSVAL 327
S S Q A G H L L+ E+ G G G+ +++T P++
Sbjct: 140 SDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQLGL------ITTTFPVTKP- 192
Query: 328 EKVSNLDGVKVIQIAAGAEHS 348
+KV +L G V+Q+A GA HS
Sbjct: 193 QKVEHLAGRVVLQVACGAFHS 213
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++T G G GQLGHGD P+ V K V + G HSL L +QVY +G
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAK---SQVYSWG 578
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----SAEGHLYTWGRG 262
S GQLG S+ ++P+++ + + ++A D S L + LY GR
Sbjct: 579 SNTFGQLGHSE---FPTTVPRLSKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQ 635
Query: 263 FNSTSDV--NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ D P + + S + LG+ + D + ++ + G ++ ++ST
Sbjct: 636 DRAEGDTLPENPSGTKTPVLLSCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHELAST 695
Query: 321 ----------------RPLSVALEKVSNLDGVKVIQIAA 343
RPL ++LE + + V+++Q A
Sbjct: 696 ERRFYSKLSEIKSQILRPL-LSLENLGTVTTVQLLQEVA 733
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 14/139 (10%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR--- 125
V +A G H A+T G V+ WG ++GQ P PV+ D
Sbjct: 93 VITVATGSFHSGAVTE-----SGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPS 147
Query: 126 --YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQ 182
I ++ G H+ +S S ++ G G QLG + P KV + V Q
Sbjct: 148 LAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 183 IACGMRHSLVLLKDCLGNQ 201
+ACG HSL L++ CL Q
Sbjct: 206 VACGAFHSLALVQ-CLPPQ 223
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 42/201 (20%)
Query: 250 LSAEGHLYTWGR-GFNSTSDVNCPQS--LPSSL---SFSQAALGWNHVLVLTGDGEVLML 303
L+ +G +Y++G + S S CP S L S+L A G H +T G V M
Sbjct: 56 LTEDGEVYSFGTLPWKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTESGVVYMW 115
Query: 304 GGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLF 361
G + G +++ + V P+S++ + S V+++Q+A G EH+
Sbjct: 116 GENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEHTLA----------- 164
Query: 362 IISYTPFFPPFFINVIAENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQ 420
++ +R I W WG QLGL T + P+ V E
Sbjct: 165 ---------------LSLSREI--WAWGTGCQLGLITTTFPVTKPQKV----EHLAGRVV 203
Query: 421 LEVFCGSGFTYAISRHCLPSQ 441
L+V CG+ + A+ + CLP Q
Sbjct: 204 LQVACGAFHSLALVQ-CLPPQ 223
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 70/186 (37%), Gaps = 42/186 (22%)
Query: 254 GHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G ++ W G S + P+ LP + QAALG H ++LT DGEV G L
Sbjct: 18 GLVHVWQAGSFSLT----PERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSF-----GTL 68
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTGKFHWVRLFIISYTPFFPP 371
+ P S LE S L G VI +A G+ HS VT
Sbjct: 69 PWKSESAEICPSSPLLE--SALVGHHVITVATGSFHSGAVT------------------- 107
Query: 372 FFINVIAENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ---LEVFCGSG 428
E+ + WG GQ + N P V++ D + L++ CG
Sbjct: 108 -------ESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEE 160
Query: 429 FTYAIS 434
T A+S
Sbjct: 161 HTLALS 166
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 518 LRTEVWTWGKGKEGQLG-HGDVLPRLQ-PLCVKCLDGKEVIHLEAGGSHSLALTAKSQVY 575
Query: 258 TWGRG-FNSTSDVNCPQSLP 276
+WG F P ++P
Sbjct: 576 SWGSNTFGQLGHSEFPTTVP 595
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,691,469
Number of Sequences: 539616
Number of extensions: 7878326
Number of successful extensions: 20519
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 18817
Number of HSP's gapped (non-prelim): 543
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)