Query 013471
Match_columns 442
No_of_seqs 537 out of 4875
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 04:11:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013471.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013471hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03192 Voltage-dependent pot 100.0 1.1E-63 2.3E-68 531.6 41.4 440 1-440 81-818 (823)
2 PHA02791 ankyrin-like protein; 100.0 4.3E-36 9.2E-41 278.5 24.5 194 156-353 25-223 (284)
3 KOG4412 26S proteasome regulat 100.0 3.5E-37 7.6E-42 251.6 12.8 184 157-341 34-221 (226)
4 KOG4412 26S proteasome regulat 100.0 2.5E-36 5.3E-41 246.6 14.0 192 162-353 4-201 (226)
5 PHA02875 ankyrin repeat protei 100.0 7.1E-35 1.5E-39 289.6 22.3 188 163-350 4-194 (413)
6 PHA02791 ankyrin-like protein; 100.0 1.2E-33 2.6E-38 262.1 21.7 186 161-353 61-249 (284)
7 PHA03100 ankyrin repeat protei 100.0 1.2E-33 2.7E-38 286.4 23.4 204 148-351 93-310 (480)
8 PHA03100 ankyrin repeat protei 100.0 1.1E-33 2.5E-38 286.7 21.0 221 149-383 56-295 (480)
9 PHA02875 ankyrin repeat protei 100.0 4.5E-33 9.7E-38 276.7 24.4 203 150-352 24-230 (413)
10 PHA02946 ankyin-like protein; 100.0 2.1E-33 4.5E-38 278.9 21.1 242 149-402 60-319 (446)
11 PHA02878 ankyrin repeat protei 100.0 3E-33 6.4E-38 282.6 22.5 192 160-353 36-296 (477)
12 PHA02874 ankyrin repeat protei 100.0 9.1E-33 2E-37 275.9 23.4 190 154-344 28-242 (434)
13 PHA03095 ankyrin-like protein; 100.0 1.2E-32 2.6E-37 278.6 22.3 223 147-383 69-302 (471)
14 PHA02716 CPXV016; CPX019; EVM0 100.0 1.3E-32 2.8E-37 281.6 21.2 198 152-349 167-428 (764)
15 PHA02946 ankyin-like protein; 100.0 1.8E-32 3.8E-37 272.2 20.9 206 162-383 38-254 (446)
16 PHA02798 ankyrin-like protein; 100.0 2.9E-32 6.3E-37 275.9 22.6 209 143-351 53-318 (489)
17 PHA03095 ankyrin-like protein; 100.0 3.1E-32 6.8E-37 275.5 22.5 233 150-405 36-282 (471)
18 PHA02874 ankyrin repeat protei 100.0 6.3E-32 1.4E-36 269.8 23.8 203 149-353 56-284 (434)
19 PHA02716 CPXV016; CPX019; EVM0 100.0 6.7E-32 1.4E-36 276.4 20.1 223 147-383 198-547 (764)
20 KOG0509 Ankyrin repeat and DHH 100.0 6.3E-32 1.4E-36 261.0 16.5 188 162-349 45-237 (600)
21 KOG0509 Ankyrin repeat and DHH 100.0 7.6E-32 1.6E-36 260.5 15.2 184 151-334 68-255 (600)
22 KOG0510 Ankyrin repeat protein 100.0 1.3E-31 2.8E-36 263.5 16.9 235 151-407 111-368 (929)
23 PHA02876 ankyrin repeat protei 100.0 6.8E-31 1.5E-35 276.6 23.1 240 143-382 160-453 (682)
24 PHA02878 ankyrin repeat protei 100.0 8.4E-31 1.8E-35 264.7 22.4 170 176-347 149-324 (477)
25 PHA02989 ankyrin repeat protei 100.0 1.7E-30 3.7E-35 263.4 23.4 204 146-350 93-315 (494)
26 KOG0510 Ankyrin repeat protein 100.0 5.2E-31 1.1E-35 259.3 17.8 239 148-406 141-403 (929)
27 PHA02859 ankyrin repeat protei 100.0 2.9E-30 6.2E-35 231.1 20.6 175 158-335 18-203 (209)
28 PHA02795 ankyrin-like protein; 100.0 3.8E-30 8.3E-35 247.4 21.8 184 167-352 83-290 (437)
29 PHA02989 ankyrin repeat protei 100.0 2.3E-30 5.1E-35 262.4 21.3 218 150-383 59-301 (494)
30 PHA02876 ankyrin repeat protei 100.0 7.2E-30 1.6E-34 268.8 24.9 207 149-355 261-474 (682)
31 PHA02798 ankyrin-like protein; 100.0 3.4E-30 7.4E-35 260.8 20.1 209 161-383 36-303 (489)
32 KOG0508 Ankyrin repeat protein 100.0 1.4E-30 2.9E-35 241.9 13.0 192 157-349 38-240 (615)
33 PHA02917 ankyrin-like protein; 100.0 2.8E-28 6.1E-33 251.3 22.2 194 154-350 25-256 (661)
34 KOG0508 Ankyrin repeat protein 100.0 4.5E-29 9.7E-34 231.8 13.1 202 167-383 10-227 (615)
35 PHA02917 ankyrin-like protein; 100.0 1E-27 2.2E-32 247.1 19.5 196 174-383 12-241 (661)
36 PHA02859 ankyrin repeat protei 100.0 4.5E-27 9.7E-32 210.5 17.8 159 191-352 18-187 (209)
37 KOG0498 K+-channel ERG and rel 100.0 3.3E-28 7.2E-33 245.3 11.3 74 1-74 97-180 (727)
38 PHA02730 ankyrin-like protein; 99.9 5.2E-27 1.1E-31 236.2 19.6 190 156-345 36-258 (672)
39 KOG4177 Ankyrin [Cell wall/mem 99.9 3.3E-28 7.2E-33 253.7 9.0 198 154-351 400-600 (1143)
40 PHA02792 ankyrin-like protein; 99.9 2.4E-26 5.2E-31 229.0 20.2 212 142-353 86-439 (631)
41 KOG4177 Ankyrin [Cell wall/mem 99.9 7.6E-27 1.6E-31 243.7 15.1 201 150-350 429-632 (1143)
42 KOG0502 Integral membrane anky 99.9 7.9E-27 1.7E-31 196.7 11.7 189 157-348 92-282 (296)
43 PHA02730 ankyrin-like protein; 99.9 9.3E-26 2E-30 227.2 20.9 210 140-350 214-524 (672)
44 PHA02795 ankyrin-like protein; 99.9 2.4E-26 5.1E-31 221.3 15.8 188 177-383 65-266 (437)
45 TIGR00870 trp transient-recept 99.9 8.2E-25 1.8E-29 232.4 19.2 224 160-403 16-280 (743)
46 PLN03192 Voltage-dependent pot 99.9 5.4E-24 1.2E-28 227.5 23.1 163 191-355 522-686 (823)
47 PHA02792 ankyrin-like protein; 99.9 4.4E-24 9.5E-29 212.9 20.5 199 152-350 166-479 (631)
48 TIGR00870 trp transient-recept 99.9 3.4E-24 7.5E-29 227.6 17.3 195 151-349 42-282 (743)
49 KOG0514 Ankyrin repeat protein 99.9 2.2E-24 4.7E-29 194.8 12.1 161 187-348 261-431 (452)
50 KOG0505 Myosin phosphatase, re 99.9 9.5E-24 2.1E-28 200.3 13.4 190 164-353 43-260 (527)
51 PHA02743 Viral ankyrin protein 99.9 3.4E-23 7.4E-28 178.5 14.6 142 183-324 9-161 (166)
52 KOG0507 CASK-interacting adapt 99.9 1.8E-23 3.9E-28 204.9 12.5 204 154-358 42-255 (854)
53 KOG0502 Integral membrane anky 99.9 1.6E-23 3.4E-28 176.8 8.6 189 165-353 66-255 (296)
54 PHA02741 hypothetical protein; 99.9 1.7E-22 3.7E-27 174.9 15.0 135 188-349 15-157 (169)
55 PHA02884 ankyrin repeat protei 99.9 1E-21 2.2E-26 182.4 17.7 152 189-348 27-186 (300)
56 KOG0505 Myosin phosphatase, re 99.9 1.2E-22 2.5E-27 193.0 11.1 183 152-334 64-274 (527)
57 PHA02743 Viral ankyrin protein 99.9 1.6E-21 3.5E-26 168.1 14.4 139 216-354 9-158 (166)
58 PF11834 DUF3354: Domain of un 99.9 3.4E-22 7.4E-27 140.4 7.7 69 367-438 1-69 (69)
59 KOG0507 CASK-interacting adapt 99.9 4.4E-22 9.5E-27 195.3 11.0 196 149-345 70-278 (854)
60 PHA02736 Viral ankyrin protein 99.9 9.8E-22 2.1E-26 167.7 11.8 133 187-349 10-151 (154)
61 KOG0514 Ankyrin repeat protein 99.9 4.7E-22 1E-26 179.8 9.6 161 152-313 259-429 (452)
62 PHA02741 hypothetical protein; 99.9 4.8E-21 1E-25 165.9 13.5 133 154-316 14-157 (169)
63 PHA02884 ankyrin repeat protei 99.9 1.4E-20 3.1E-25 174.7 16.4 146 162-315 34-186 (300)
64 KOG3676 Ca2+-permeable cation 99.8 1.6E-20 3.4E-25 186.9 14.4 237 163-410 103-394 (782)
65 PHA02736 Viral ankyrin protein 99.8 1.3E-20 2.9E-25 160.7 9.9 132 155-318 11-153 (154)
66 KOG0512 Fetal globin-inducing 99.8 6.2E-20 1.3E-24 149.6 12.5 142 164-336 66-210 (228)
67 KOG0512 Fetal globin-inducing 99.8 1.7E-19 3.7E-24 147.0 12.4 121 197-348 66-188 (228)
68 KOG0195 Integrin-linked kinase 99.8 3E-19 6.5E-24 156.9 10.2 136 185-351 25-160 (448)
69 KOG4369 RTK signaling protein 99.8 5.8E-20 1.3E-24 185.7 5.9 227 120-351 754-986 (2131)
70 KOG0501 K+-channel KCNQ [Inorg 99.8 1.9E-19 4.1E-24 171.7 7.2 73 1-74 237-311 (971)
71 PF12796 Ank_2: Ankyrin repeat 99.8 2.8E-18 6E-23 132.0 11.4 89 165-257 1-89 (89)
72 PF12796 Ank_2: Ankyrin repeat 99.8 4.4E-18 9.4E-23 130.9 11.9 89 231-321 1-89 (89)
73 KOG4369 RTK signaling protein 99.8 3.6E-19 7.7E-24 180.1 7.1 194 157-350 753-952 (2131)
74 KOG0195 Integrin-linked kinase 99.7 2.3E-17 4.9E-22 145.2 10.4 120 146-265 19-140 (448)
75 cd00204 ANK ankyrin repeats; 99.7 1.9E-16 4.1E-21 129.3 15.3 123 190-343 3-125 (126)
76 cd00204 ANK ankyrin repeats; 99.7 2.3E-16 5E-21 128.8 15.3 98 257-354 6-103 (126)
77 KOG3676 Ca2+-permeable cation 99.7 6.2E-16 1.3E-20 154.4 16.2 162 152-313 134-330 (782)
78 COG0666 Arp FOG: Ankyrin repea 99.6 4.2E-15 9.2E-20 134.7 13.8 135 187-347 66-203 (235)
79 KOG0500 Cyclic nucleotide-gate 99.6 1.7E-15 3.7E-20 143.0 8.8 61 75-135 299-359 (536)
80 KOG4214 Myotrophin and similar 99.6 1.4E-14 3E-19 105.8 9.4 92 164-256 5-96 (117)
81 COG0666 Arp FOG: Ankyrin repea 99.6 2.2E-14 4.9E-19 129.9 12.5 128 156-314 68-203 (235)
82 KOG4214 Myotrophin and similar 99.6 1.3E-14 2.7E-19 106.1 8.1 102 230-331 5-107 (117)
83 PF13857 Ank_5: Ankyrin repeat 99.5 1.6E-14 3.5E-19 99.9 5.0 55 277-331 1-56 (56)
84 KOG1710 MYND Zn-finger and ank 99.5 1.4E-13 3.1E-18 121.3 10.3 57 290-346 78-134 (396)
85 PTZ00322 6-phosphofructo-2-kin 99.5 2.7E-13 5.8E-18 141.4 13.0 88 162-249 83-170 (664)
86 PF13857 Ank_5: Ankyrin repeat 99.5 4.2E-14 9.2E-19 97.8 4.7 55 180-234 1-56 (56)
87 PF13637 Ank_4: Ankyrin repeat 99.5 1.2E-13 2.5E-18 95.1 6.5 54 291-344 1-54 (54)
88 PTZ00322 6-phosphofructo-2-kin 99.5 3.2E-13 6.9E-18 140.9 12.5 100 197-296 85-193 (664)
89 PF13637 Ank_4: Ankyrin repeat 99.4 2.5E-13 5.4E-18 93.5 6.5 54 194-247 1-54 (54)
90 KOG0515 p53-interacting protei 99.4 7.5E-13 1.6E-17 125.6 11.5 93 261-353 553-645 (752)
91 KOG0515 p53-interacting protei 99.4 4.3E-13 9.4E-18 127.2 9.8 92 164-255 553-644 (752)
92 KOG1710 MYND Zn-finger and ank 99.4 1.4E-12 3.1E-17 115.2 11.7 115 162-276 13-130 (396)
93 KOG0499 Cyclic nucleotide-gate 99.4 5.2E-13 1.1E-17 128.5 7.2 132 2-135 249-579 (815)
94 KOG0506 Glutaminase (contains 99.0 3.8E-10 8.2E-15 106.3 6.0 104 148-251 493-597 (622)
95 KOG0506 Glutaminase (contains 99.0 5.5E-10 1.2E-14 105.2 5.2 89 260-348 508-597 (622)
96 KOG0818 GTPase-activating prot 98.9 4.3E-09 9.3E-14 99.7 9.5 88 261-348 136-224 (669)
97 KOG0818 GTPase-activating prot 98.9 7.9E-09 1.7E-13 98.0 10.2 88 161-248 133-221 (669)
98 PF13606 Ank_3: Ankyrin repeat 98.9 2.9E-09 6.2E-14 62.9 3.9 30 290-319 1-30 (30)
99 KOG0782 Predicted diacylglycer 98.8 1E-08 2.2E-13 98.7 8.3 88 260-347 901-990 (1004)
100 PF13606 Ank_3: Ankyrin repeat 98.8 6.7E-09 1.5E-13 61.3 4.0 29 193-221 1-29 (30)
101 PF00023 Ank: Ankyrin repeat H 98.8 8.2E-09 1.8E-13 62.7 3.9 33 290-322 1-33 (33)
102 PF00023 Ank: Ankyrin repeat H 98.7 1.7E-08 3.6E-13 61.4 4.4 32 193-224 1-32 (33)
103 KOG0783 Uncharacterized conser 98.7 6.6E-09 1.4E-13 104.2 3.5 85 154-238 45-130 (1267)
104 KOG0783 Uncharacterized conser 98.7 9.5E-09 2.1E-13 103.1 3.5 83 187-300 45-128 (1267)
105 KOG0705 GTPase-activating prot 98.7 5.4E-08 1.2E-12 94.1 8.4 89 262-350 628-720 (749)
106 KOG0782 Predicted diacylglycer 98.7 7.3E-08 1.6E-12 92.9 8.5 118 165-313 870-989 (1004)
107 KOG0705 GTPase-activating prot 98.6 1.2E-07 2.5E-12 91.9 9.2 94 162-255 625-722 (749)
108 KOG0522 Ankyrin repeat protein 98.6 9.4E-08 2E-12 92.0 7.8 86 261-346 23-110 (560)
109 KOG0522 Ankyrin repeat protein 98.6 9.8E-08 2.1E-12 91.9 7.7 87 163-249 22-110 (560)
110 KOG3609 Receptor-activated Ca2 98.4 1.5E-06 3.3E-11 88.6 10.6 118 164-288 28-161 (822)
111 KOG2384 Major histocompatibili 98.4 1.1E-06 2.4E-11 73.8 7.1 69 281-349 2-71 (223)
112 KOG0521 Putative GTPase activa 98.4 2.9E-07 6.2E-12 96.2 4.5 91 256-346 654-744 (785)
113 KOG3609 Receptor-activated Ca2 98.4 2.7E-06 5.8E-11 86.8 10.8 121 192-317 23-157 (822)
114 KOG0511 Ankyrin repeat protein 98.3 1.9E-06 4.2E-11 79.6 7.4 73 164-237 39-111 (516)
115 KOG2384 Major histocompatibili 98.2 4E-06 8.6E-11 70.5 6.8 69 184-252 2-71 (223)
116 KOG0511 Ankyrin repeat protein 98.1 6.7E-06 1.5E-10 76.1 7.2 58 261-318 39-96 (516)
117 KOG0521 Putative GTPase activa 98.1 2.1E-06 4.5E-11 89.9 4.5 95 182-276 642-740 (785)
118 KOG0520 Uncharacterized conser 98.0 8.4E-06 1.8E-10 85.0 6.1 123 223-346 570-702 (975)
119 KOG0520 Uncharacterized conser 98.0 8.1E-06 1.7E-10 85.2 5.9 128 152-280 565-702 (975)
120 KOG2505 Ankyrin repeat protein 97.4 0.00032 6.8E-09 67.6 6.2 73 270-345 403-481 (591)
121 smart00248 ANK ankyrin repeats 96.9 0.0016 3.4E-08 36.9 3.8 27 291-317 2-28 (30)
122 smart00248 ANK ankyrin repeats 96.9 0.0018 3.9E-08 36.7 4.0 27 194-220 2-28 (30)
123 KOG2505 Ankyrin repeat protein 96.9 0.0017 3.7E-08 62.7 5.6 63 173-235 403-471 (591)
124 PF03158 DUF249: Multigene fam 96.8 0.032 6.8E-07 47.4 12.0 137 162-312 47-191 (192)
125 PF06128 Shigella_OspC: Shigel 96.5 0.023 5E-07 49.7 9.5 45 165-216 157-201 (284)
126 PF03158 DUF249: Multigene fam 96.5 0.022 4.8E-07 48.3 8.8 139 195-345 47-191 (192)
127 PF06128 Shigella_OspC: Shigel 95.9 0.062 1.3E-06 47.1 9.0 47 303-349 229-279 (284)
128 cd06537 CIDE_N_B CIDE_N domain 92.1 0.5 1.1E-05 34.4 5.4 55 388-442 15-73 (81)
129 PF11929 DUF3447: Domain of un 91.6 0.78 1.7E-05 33.4 6.3 46 164-216 9-54 (76)
130 KOG0614 cGMP-dependent protein 90.7 0.52 1.1E-05 46.7 5.7 59 77-135 266-324 (732)
131 cd01615 CIDE_N CIDE_N domain, 90.4 0.8 1.7E-05 33.3 5.1 55 388-442 15-74 (78)
132 PF11929 DUF3447: Domain of un 90.0 0.64 1.4E-05 33.9 4.5 48 195-249 7-54 (76)
133 PF00520 Ion_trans: Ion transp 89.9 0.076 1.6E-06 46.4 -0.6 46 15-73 1-47 (200)
134 smart00100 cNMP Cyclic nucleot 88.7 0.81 1.8E-05 35.6 4.7 46 90-135 1-46 (120)
135 smart00266 CAD Domains present 88.6 1.4 3E-05 31.7 5.1 55 388-442 13-72 (74)
136 cd06539 CIDE_N_A CIDE_N domain 88.6 1.4 2.9E-05 32.0 5.1 53 390-442 17-74 (78)
137 PRK09392 ftrB transcriptional 88.5 0.85 1.8E-05 41.4 5.3 53 83-135 7-59 (236)
138 cd00038 CAP_ED effector domain 88.1 0.97 2.1E-05 34.9 4.8 46 90-135 1-46 (115)
139 PLN02868 acyl-CoA thioesterase 87.3 0.97 2.1E-05 44.9 5.2 53 83-135 8-60 (413)
140 cd06538 CIDE_N_FSP27 CIDE_N do 86.9 2.1 4.6E-05 31.2 5.3 55 388-442 15-73 (79)
141 cd06536 CIDE_N_ICAD CIDE_N dom 86.2 2 4.2E-05 31.4 4.8 54 389-442 16-76 (80)
142 PF02017 CIDE-N: CIDE-N domain 85.8 1.6 3.4E-05 31.9 4.2 54 389-442 16-74 (78)
143 KOG1113 cAMP-dependent protein 84.5 2.1 4.6E-05 40.4 5.5 54 82-135 121-174 (368)
144 cd06535 CIDE_N_CAD CIDE_N doma 82.1 3.5 7.5E-05 29.9 4.6 53 390-442 17-73 (77)
145 PF03607 DCX: Doublecortin; I 81.6 1.9 4.1E-05 29.8 3.1 47 394-441 9-56 (60)
146 PRK11753 DNA-binding transcrip 70.5 7.4 0.00016 34.3 4.7 45 91-135 5-49 (211)
147 COG2905 Predicted signal-trans 67.5 9.7 0.00021 38.6 5.0 54 83-136 7-60 (610)
148 cd00754 MoaD Ubiquitin domain 53.2 23 0.00051 25.6 3.9 46 394-439 26-75 (80)
149 PRK11161 fumarate/nitrate redu 51.9 24 0.00053 31.7 4.7 51 85-135 15-66 (235)
150 cd00565 ThiS ThiaminS ubiquiti 51.2 34 0.00074 23.8 4.3 42 394-439 15-60 (65)
151 KOG1709 Guanidinoacetate methy 47.0 18 0.00039 32.1 2.7 39 278-316 2-40 (271)
152 KOG0513 Ca2+-independent phosp 45.3 1.1 2.5E-05 45.1 -5.5 157 154-338 48-207 (503)
153 KOG1113 cAMP-dependent protein 41.0 24 0.00053 33.6 2.8 60 77-136 234-293 (368)
154 PF04053 Coatomer_WDAD: Coatom 38.2 29 0.00063 34.8 3.1 162 163-348 266-430 (443)
155 COG0664 Crp cAMP-binding prote 36.4 56 0.0012 28.3 4.5 49 87-135 4-52 (214)
156 PRK06437 hypothetical protein; 35.9 65 0.0014 22.6 3.8 42 394-439 21-62 (67)
157 PF14453 ThiS-like: ThiS-like 35.7 28 0.0006 23.7 1.7 28 413-440 29-56 (57)
158 TIGR01683 thiS thiamine biosyn 35.2 97 0.0021 21.4 4.6 50 386-439 4-59 (64)
159 PF00027 cNMP_binding: Cyclic 33.9 40 0.00087 24.4 2.7 28 109-136 2-29 (91)
160 PRK08364 sulfur carrier protei 33.4 53 0.0011 23.3 3.0 42 394-439 24-65 (70)
161 KOG0513 Ca2+-independent phosp 33.3 12 0.00026 37.9 -0.5 132 189-337 50-182 (503)
162 KOG3836 HLH transcription fact 32.8 11 0.00024 38.5 -0.9 49 169-217 404-452 (605)
163 KOG1545 Voltage-gated shaker-l 32.1 1.2E+02 0.0025 29.2 5.7 53 9-74 251-303 (507)
164 TIGR01687 moaD_arch MoaD famil 31.2 63 0.0014 23.9 3.3 46 394-439 25-83 (88)
165 PLN03218 maturation of RBCL 1; 29.3 5E+02 0.011 29.5 11.1 112 163-278 584-707 (1060)
166 KOG1709 Guanidinoacetate methy 27.4 60 0.0013 28.9 2.8 39 246-284 1-41 (271)
167 COG4647 AcxC Acetone carboxyla 27.2 46 0.00099 26.6 1.9 16 427-442 52-67 (165)
168 PF07930 DAP_B: D-aminopeptida 26.8 45 0.00097 24.7 1.6 27 413-439 47-73 (88)
169 KOG0292 Vesicle coat complex C 26.3 8.4E+02 0.018 26.9 11.1 156 165-349 600-781 (1202)
170 smart00537 DCX Domain in the D 26.3 67 0.0014 24.1 2.6 43 394-436 31-76 (89)
171 TIGR01682 moaD molybdopterin c 25.0 93 0.002 22.5 3.2 46 394-439 27-75 (80)
172 cd00196 UBQ Ubiquitin-like pro 24.7 74 0.0016 20.5 2.6 47 393-439 17-68 (69)
173 COG0490 Putative regulatory, l 23.7 43 0.00094 28.2 1.3 14 427-440 133-146 (162)
174 PRK10402 DNA-binding transcrip 22.5 68 0.0015 28.7 2.4 35 101-135 26-60 (226)
175 PF02597 ThiS: ThiS family; I 21.9 90 0.002 22.1 2.6 47 393-439 21-72 (77)
176 PLN03218 maturation of RBCL 1; 21.6 6E+02 0.013 28.9 9.9 13 327-339 655-667 (1060)
177 PF04017 DUF366: Domain of unk 21.0 62 0.0013 27.7 1.7 13 425-437 99-111 (183)
178 PF02080 TrkA_C: TrkA-C domain 20.6 57 0.0012 22.7 1.3 15 426-440 45-59 (71)
179 PRK08053 sulfur carrier protei 20.6 2.8E+02 0.006 19.2 4.8 48 387-439 7-61 (66)
No 1
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=100.00 E-value=1.1e-63 Score=531.64 Aligned_cols=440 Identities=30% Similarity=0.476 Sum_probs=366.4
Q ss_pred CEeeeccCC-CCChhHHHHHHHHHHHHHHhhhceeeEEeCCceEEEechHHHHHHHHhhhhhhhhhhcCcHHHHH-----
Q 013471 1 MEFAFFRGL-PENLSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPWDVIY----- 74 (442)
Q Consensus 1 ~~~~f~~~~-~~~~~~~~~~~~~~~~~d~~~~f~~~~~~~~~~~~v~~~~~i~~~y~~~~~~~d~~~~~p~~~~~----- 74 (442)
|+++|.... ...|+++|+++|++|++||+++|+|||++++++.+|.||++|++||+++||++|+++.+|++++.
T Consensus 81 ~~~~F~~~~~~~~~~~~d~i~~~~F~iDi~l~f~~ay~d~~~~~lV~d~~~I~~~Yl~~~f~~Dlis~lP~~~i~~~~~~ 160 (823)
T PLN03192 81 FEVAFLNASPKRGLEIADNVVDLFFAVDIVLTFFVAYIDPRTQLLVRDRKKIAVRYLSTWFLMDVASTIPFQALAYLITG 160 (823)
T ss_pred HHHHeeCCCCCCCeeeHHHHHHHHHHHHHHhheeEEEEeCCCcEEEeCHHHHHHHHHHHhHHHHHHHHhHHHHHHHHhcC
Confidence 567887643 44699999999999999999999999999999889999999999999999999999999997641
Q ss_pred --------------------------------------------------------------------------------
Q 013471 75 -------------------------------------------------------------------------------- 74 (442)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (442)
T Consensus 161 ~~~~~~~~~~l~llrl~Rl~ri~~~~~~le~~~~~~~~~~~~~kli~~~l~~~H~~aC~~y~i~~~~~~~~~~Wi~~~~~ 240 (823)
T PLN03192 161 TVKLNLSYSLLGLLRFWRLRRVKQLFTRLEKDIRFSYFWIRCARLLSVTLFLVHCAGCLYYLIADRYPHQGKTWIGAVIP 240 (823)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHhhh
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 013471 75 -------------------------------------------------------------------------------- 74 (442)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (442)
T Consensus 241 ~~~~~s~~~~Yi~slYwai~TmtTVGYGDi~p~t~~E~i~~i~~ml~g~~~~a~~ig~i~~li~~~~~~~~~f~~~~~~~ 320 (823)
T PLN03192 241 NFRETSLWIRYISAIYWSITTMTTVGYGDLHAVNTIEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAA 320 (823)
T ss_pred ccccCcHHHHHHHHHHHHHHHHhhccCCCcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred ---------------------------------------------HHHHHhhhhhhhcccCccCCCHHHHHHHHHhcccc
Q 013471 75 ---------------------------------------------KISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEE 109 (442)
Q Consensus 75 ---------------------------------------------~i~~~l~~~~v~~~~lf~~~s~~~l~~lv~~~~~e 109 (442)
+|++++|.++++++++|+++|++++.+++..++++
T Consensus 321 ~~ym~~~~lp~~lq~ri~~y~~~~~~~~~~~~~~~l~~Lp~~Lr~~i~~~l~~~~l~~~~lF~~~s~~~l~~L~~~~~~~ 400 (823)
T PLN03192 321 SNFVGRNRLPPRLKDQILAYMCLRFKAESLNQQQLIDQLPKSICKSICQHLFLPVVEKVYLFKGVSREILLLLVTKMKAE 400 (823)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhhccccHHHHHHHcCHHHHHHHHHHHHHHHHhhCcchhcCCHHHHHHHHHhhhee
Confidence 78999999999999999999999999999999999
Q ss_pred cccCcceeeecCcccceeEEEeecccccc-----ch--------------------------------------------
Q 013471 110 FFLPGEVIMEQGNVVDQLYFVCHGVLGKE-----SN-------------------------------------------- 140 (442)
Q Consensus 110 ~~~p~e~ii~~~~~~~~ly~i~~g~~~~~-----~~-------------------------------------------- 140 (442)
+++|++.++.+|+.++.+|++++|.+.-. ..
T Consensus 401 ~~~pge~I~~qge~~~~lY~I~~G~V~i~~~~~~~e~~l~~l~~Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~ 480 (823)
T PLN03192 401 YIPPREDVIMQNEAPDDVYIVVSGEVEIIDSEGEKERVVGTLGCGDIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSTLI 480 (823)
T ss_pred eeCCCCEEEECCCCCceEEEEEecEEEEEEecCCcceeeEEccCCCEecchHHhcCCCCCCeEEEcccEEEEEEEHHHHH
Confidence 99999999999999999999999987100 00
Q ss_pred -----------HHHHhhhc------ccc-------cccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCh
Q 013471 141 -----------LRLKQLKS------DIT-------FHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRS 196 (442)
Q Consensus 141 -----------~~~~~~~~------~~~-------~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t 196 (442)
..+..+.. +.. ......+..+.++|+.||..|+.++++.|++.|+++|..|..|+|
T Consensus 481 ~ll~~~p~d~~~i~~~~l~~~~~l~~l~v~~ll~~~~~~~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~T 560 (823)
T PLN03192 481 EAMQTRQEDNVVILKNFLQHHKELHDLNVGDLLGDNGGEHDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRT 560 (823)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhhhccccHHHHHhhcccccCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 00000000 000 000112234568899999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHH
Q 013471 197 PLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKR 276 (442)
Q Consensus 197 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~ 276 (442)
|||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|++.++..+...+.++||.|+.+|+.++++.
T Consensus 561 pLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~ 640 (823)
T PLN03192 561 PLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKE 640 (823)
T ss_pred HHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888888899999999999999999
Q ss_pred HHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCC-CCHHHHHHHcCCHHHHHH--HHHcCCCccc-
Q 013471 277 VLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWG-NTPLDEGRMCGNKNLIKL--LEDAECTQLS- 352 (442)
Q Consensus 277 Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g-~tpl~~A~~~~~~~~v~~--Ll~~~a~~~~- 352 (442)
|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|++++..|..| .||++.+......+...- +.+..+....
T Consensus 641 Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (823)
T PLN03192 641 LLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQKRELGHSITIVDSVPADEPD 720 (823)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHHhhhCceeeeccCCCccccc
Confidence 999999999999999999999999999999999999999999999988 999988866544332111 1111110000
Q ss_pred -------ccccccchhhcccCCCcceecCCCCCCccc--cccCceEEEccCcHHHHHHHHhhhcCCCCCCc-ccccCCce
Q 013471 353 -------EFHYCSQGMIDKMHPRKCTVFPFHPWDEKV--HRRHGIVLWVPHNIEELIKLAVDKLDFPDGHS-ILSEDGGK 422 (442)
Q Consensus 353 -------~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~--~~~~~~~~~lp~~~~~ll~~~~~k~~~~~~~~-~~~~~~~~ 422 (442)
................++.++..|+..++. ....++++++|++++|+.+++++|+|+....+ +.++||||
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (823)
T PLN03192 721 LGRDGGSRPGRLQGTSSDNQCRPRVSIYKGHPLLRNERCCNEAGKLINLPPSLEELKAIAGEKLGFDARKAMVTNEEGAE 800 (823)
T ss_pred cccccccccccccccccccccCceEEEecCCCcccccccccccCeEEeCCccHHHHHHHHHHHhCCCcccceeecCCCce
Confidence 000000111123334567888888876654 45789999999999999999999999877654 56999999
Q ss_pred eeEeeeeecCCeEEEeec
Q 013471 423 ILDVDMINDGQKLYLISE 440 (442)
Q Consensus 423 i~~i~~ird~d~~~~~~~ 440 (442)
|++|+||||||+||++++
T Consensus 801 ~~~~~~~~~~~~~~~~~~ 818 (823)
T PLN03192 801 IDSIEVIRDNDKLFVVED 818 (823)
T ss_pred eeeeEEEecCCEEEEeec
Confidence 999999999999999986
No 2
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=4.3e-36 Score=278.47 Aligned_cols=194 Identities=22% Similarity=0.168 Sum_probs=179.3
Q ss_pred cchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 013471 156 KHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAI 235 (442)
Q Consensus 156 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 235 (442)
..+..|.||||+|+..|+.++++.|++.|++++..+ |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa 102 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAV 102 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 467779999999999999999999999999988764 789999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCcCCC---ChHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhChHHHHHHHH
Q 013471 236 KCGHDGVTSLLVKEGASLNVDDA---GSFLCTAVARGDSDFLKRVLSNGVDPSSRD-YDHRTPLHVAASEGLYLMAKLLL 311 (442)
Q Consensus 236 ~~~~~~iv~~Ll~~g~~~~~~~~---~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll 311 (442)
..|+.+++++|+++|++++..+. .||||+|+..|+.+++++|++++.+. .+ ..|+||||+|+..|+.+++++|+
T Consensus 103 ~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL 180 (284)
T PHA02791 103 DSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLL 180 (284)
T ss_pred HcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999887543 48999999999999999999987543 23 35899999999999999999999
Q ss_pred HCCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCcccc
Q 013471 312 EAGASVFTKDRWGNTP-LDEGRMCGNKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 312 ~~ga~~~~~~~~g~tp-l~~A~~~~~~~~v~~Ll~~~a~~~~~ 353 (442)
++|++++.+|..|.|| ||+|+.+|+.+++++|+++|++...+
T Consensus 181 ~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~ 223 (284)
T PHA02791 181 DYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSV 223 (284)
T ss_pred HCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccC
Confidence 9999999999999987 99999999999999999999987554
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-37 Score=251.56 Aligned_cols=184 Identities=28% Similarity=0.342 Sum_probs=163.6
Q ss_pred chhhhhHHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHH
Q 013471 157 HEAELALRVNSAAYHGDLYQLKGLIR-AGADPNKTDYDGRSPLHLATSRGYEDITLFLIQK-GVDINIKDKFGNTPLLEA 234 (442)
Q Consensus 157 ~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A 234 (442)
.+..|+||||+||..|+.+++.+|++ .+..+|..|..|+||||.||..|+.++|+.|+.+ |+|+|..++.|.|+||+|
T Consensus 34 ~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyA 113 (226)
T KOG4412|consen 34 DDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYA 113 (226)
T ss_pred ccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhh
Confidence 34478999999999999999999994 4677888899999999999999999999999998 999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHH
Q 013471 235 IKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLE 312 (442)
Q Consensus 235 ~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~ 312 (442)
+..|+.+|+++|+++|+.++.++ +.||||-|+..|+++++++|+..|+.+|.+|..|+||||.|...|+.++..+|++
T Consensus 114 agK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~ 193 (226)
T KOG4412|consen 114 AGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVR 193 (226)
T ss_pred hcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHH
Confidence 99999999999999999988877 4589999999999999999999999999999999999999988999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 013471 313 AGASVFTKDRWGNTPLDEGRMCGNKNLIK 341 (442)
Q Consensus 313 ~ga~~~~~~~~g~tpl~~A~~~~~~~~v~ 341 (442)
+||+++..|++| ||+..|+-.-...+.+
T Consensus 194 ~gAd~~~edke~-t~~~~a~~~l~~alk~ 221 (226)
T KOG4412|consen 194 AGADTDREDKEG-TALRIACNELLEALKE 221 (226)
T ss_pred hccceeeccccC-chHHHHHHHHHHHHHH
Confidence 999999999988 9988776544444443
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-36 Score=246.62 Aligned_cols=192 Identities=31% Similarity=0.412 Sum_probs=177.4
Q ss_pred hHHHHHHHhcCCHHHHHHHHHcCC-CCCCCCC-CCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcC
Q 013471 162 ALRVNSAAYHGDLYQLKGLIRAGA-DPNKTDY-DGRSPLHLATSRGYEDITLFLIQ-KGVDINIKDKFGNTPLLEAIKCG 238 (442)
Q Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~ 238 (442)
.++.+.++......-++.++++.+ .++.++. +|+||||+||..|+.+++++|++ -+..+|.+|..|+||||.|+..|
T Consensus 4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g 83 (226)
T KOG4412|consen 4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG 83 (226)
T ss_pred cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence 456778888888888899988876 5777765 99999999999999999999995 58889999999999999999999
Q ss_pred CHHHHHHHHHc-CCCCCcC--CCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCC
Q 013471 239 HDGVTSLLVKE-GASLNVD--DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGA 315 (442)
Q Consensus 239 ~~~iv~~Ll~~-g~~~~~~--~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga 315 (442)
+.++|+.|+.+ |+++|.. .+.|+||+|+..|..+++++|+++|+.++.+|..|.||||.|+..|.++++++|+..|+
T Consensus 84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a 163 (226)
T KOG4412|consen 84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA 163 (226)
T ss_pred cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence 99999999999 9999884 45699999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 013471 316 SVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 316 ~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~ 353 (442)
.+|.+|..|+||||.|.-.|+.++..+|+++||+...+
T Consensus 164 ~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~e 201 (226)
T KOG4412|consen 164 PLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDRE 201 (226)
T ss_pred CCCcccccCccHHHHHHhccCchHHHHHHHhccceeec
Confidence 99999999999999999999999999999999875443
No 5
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=289.60 Aligned_cols=188 Identities=26% Similarity=0.305 Sum_probs=108.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 013471 163 LRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGV 242 (442)
Q Consensus 163 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~i 242 (442)
++||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|+.++
T Consensus 4 ~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~ 83 (413)
T PHA02875 4 VALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKA 83 (413)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHH
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHcCCCCCc---CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCC
Q 013471 243 TSLLVKEGASLNV---DDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFT 319 (442)
Q Consensus 243 v~~Ll~~g~~~~~---~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~ 319 (442)
+++|++.|+..+. .++.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 84 v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~ 163 (413)
T PHA02875 84 VEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI 163 (413)
T ss_pred HHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 5555555544321 2344555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q 013471 320 KDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 350 (442)
Q Consensus 320 ~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~ 350 (442)
+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 164 ~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~ 194 (413)
T PHA02875 164 EDCCGCTPLIIAMAKGDIAICKMLLDSGANI 194 (413)
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 5555555555555555555555555555543
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=262.10 Aligned_cols=186 Identities=17% Similarity=0.190 Sum_probs=171.9
Q ss_pred hhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHcCC
Q 013471 161 LALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGN-TPLLEAIKCGH 239 (442)
Q Consensus 161 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~-tpL~~A~~~~~ 239 (442)
+.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|+ ||||+|+..|+
T Consensus 61 ~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~ 140 (284)
T PHA02791 61 NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 140 (284)
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCC
Confidence 57999999999999999999999999999999999999999999999999999999999999998885 89999999999
Q ss_pred HHHHHHHHHcCCCC-CcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH-HHHHHHhChHHHHHHHHHCCCCC
Q 013471 240 DGVTSLLVKEGASL-NVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTP-LHVAASEGLYLMAKLLLEAGASV 317 (442)
Q Consensus 240 ~~iv~~Ll~~g~~~-~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~-Lh~A~~~g~~~iv~~Ll~~ga~~ 317 (442)
.+++++|++++.+. +...+.||||+|+.+|+.+++++|+++|++++.++..|.|| ||+|+..|+.++|++|+++|+++
T Consensus 141 ~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~i 220 (284)
T PHA02791 141 VSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINI 220 (284)
T ss_pred HHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999987654 22346899999999999999999999999999999999987 99999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 013471 318 FTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 318 ~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~ 353 (442)
+.+|..| +|| ++.|++++|+++.++-.+.
T Consensus 221 n~~~~~~-~~l------~~~e~~~~ll~~~~~~~~~ 249 (284)
T PHA02791 221 YSVNLEN-VLL------DDAEIAKMIIEKHVEYKSD 249 (284)
T ss_pred ccCcccC-ccC------CCHHHHHHHHHhhhhhccc
Confidence 9999954 666 8999999999988764443
No 7
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=286.38 Aligned_cols=204 Identities=28% Similarity=0.353 Sum_probs=193.5
Q ss_pred cccccccccchhhhhHHHHHHH--hcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCC
Q 013471 148 SDITFHIGKHEAELALRVNSAA--YHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG--YEDITLFLIQKGVDINIK 223 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~~ 223 (442)
.+....++..+..|.||||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +.+++++|+++|++++.+
T Consensus 93 l~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~ 172 (480)
T PHA03100 93 LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAK 172 (480)
T ss_pred HHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccc
Confidence 3445566777888999999999 999999999999999999999999999999999999 999999999999999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC--------ChHHHHHHHcCC--HHHHHHHHHCCCCCCCCCCCCCc
Q 013471 224 DKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDA--------GSFLCTAVARGD--SDFLKRVLSNGVDPSSRDYDHRT 293 (442)
Q Consensus 224 ~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~--------~~~L~~A~~~g~--~~~v~~Ll~~g~~~~~~~~~g~t 293 (442)
+..|.||||+|+..|+.+++++|+++|++++..+. .+|||.|+..|+ .+++++|+++|++++.+|..|.|
T Consensus 173 d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~T 252 (480)
T PHA03100 173 NRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFT 252 (480)
T ss_pred cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCC
Confidence 99999999999999999999999999999987543 689999999999 99999999999999999999999
Q ss_pred HHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q 013471 294 PLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 351 (442)
Q Consensus 294 ~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~ 351 (442)
|||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.+++++|+++|++..
T Consensus 253 pL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 253 PLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999654
No 8
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=286.65 Aligned_cols=221 Identities=26% Similarity=0.316 Sum_probs=201.8
Q ss_pred ccccccccchhhhhHHHHH-----HHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH--HcCCHHHHHHHHHcCCCCC
Q 013471 149 DITFHIGKHEAELALRVNS-----AAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLAT--SRGYEDITLFLIQKGVDIN 221 (442)
Q Consensus 149 ~~~~~~~~~~~~~~t~L~~-----A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~~ 221 (442)
+.+...+..+..+.||||. |+..|+.+++++|+++|++++..+..|.||||+|+ ..|+.+++++|+++|++++
T Consensus 56 ~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~ 135 (480)
T PHA03100 56 DNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVN 135 (480)
T ss_pred HcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCC
Confidence 3345566667778899999 99999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC------
Q 013471 222 IKDKFGNTPLLEAIKCG--HDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDH------ 291 (442)
Q Consensus 222 ~~~~~g~tpL~~A~~~~--~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g------ 291 (442)
..+..|.||||+|+..| +.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++..+..|
T Consensus 136 ~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 215 (480)
T PHA03100 136 IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIF 215 (480)
T ss_pred ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHH
Confidence 99999999999999999 9999999999999988754 5699999999999999999999999999999999
Q ss_pred CcHHHHHHHhCh--HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccchhhcccCCCc
Q 013471 292 RTPLHVAASEGL--YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRK 369 (442)
Q Consensus 292 ~t~Lh~A~~~g~--~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~ 369 (442)
.||||.|+..|+ .+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++... .+.
T Consensus 216 ~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~--------------~d~ 281 (480)
T PHA03100 216 ETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNL--------------VNK 281 (480)
T ss_pred HhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--------------cCC
Confidence 999999999999 9999999999999999999999999999999999999999999995433 234
Q ss_pred ceecCCCCCCcccc
Q 013471 370 CTVFPFHPWDEKVH 383 (442)
Q Consensus 370 ~~~~~~h~~~~~~~ 383 (442)
.+.+|+|.|...++
T Consensus 282 ~g~tpl~~A~~~~~ 295 (480)
T PHA03100 282 YGDTPLHIAILNNN 295 (480)
T ss_pred CCCcHHHHHHHhCC
Confidence 45567777666555
No 9
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=276.70 Aligned_cols=203 Identities=23% Similarity=0.164 Sum_probs=188.2
Q ss_pred cccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCC
Q 013471 150 ITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDIN-IKDKFGN 228 (442)
Q Consensus 150 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~ 228 (442)
.....+.....|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|+.+++++|++.|++.+ ..+..|.
T Consensus 24 ~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 103 (413)
T PHA02875 24 IGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGM 103 (413)
T ss_pred CCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCC
Confidence 344555666679999999999999999999999999999998999999999999999999999999998764 4567899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHH
Q 013471 229 TPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLM 306 (442)
Q Consensus 229 tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~i 306 (442)
||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 104 tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~ei 183 (413)
T PHA02875 104 TPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAI 183 (413)
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999999998754 5699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCC-CHHHHHHHcCCHHHHHHHHHcCCCccc
Q 013471 307 AKLLLEAGASVFTKDRWGN-TPLDEGRMCGNKNLIKLLEDAECTQLS 352 (442)
Q Consensus 307 v~~Ll~~ga~~~~~~~~g~-tpl~~A~~~~~~~~v~~Ll~~~a~~~~ 352 (442)
+++|+++|++++..+..|. ||+|+|+..|+.+++++|+++|++...
T Consensus 184 v~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~ 230 (413)
T PHA02875 184 CKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI 230 (413)
T ss_pred HHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcch
Confidence 9999999999999998875 789999999999999999999998753
No 10
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=278.85 Aligned_cols=242 Identities=20% Similarity=0.237 Sum_probs=200.8
Q ss_pred ccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCC-CCC
Q 013471 149 DITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG--YEDITLFLIQKGVDINI-KDK 225 (442)
Q Consensus 149 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~-~~~ 225 (442)
.....++..+..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..+ ..+++++|+++|++++. .+.
T Consensus 60 ~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~ 139 (446)
T PHA02946 60 HRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDE 139 (446)
T ss_pred HCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCC
Confidence 345667788888999999999999999999999999999999999999999999876 48999999999999995 689
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHh
Q 013471 226 FGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARG--DSDFLKRVLSNGVDPSSRDYDHRTPLHVAASE 301 (442)
Q Consensus 226 ~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~ 301 (442)
.|.|||| |+..++.+++++|++.|++++..+ +.||||.|+..+ +.+++++|+++|++++.+|.+|+||||+|+..
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~ 218 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSK 218 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 9999997 667799999999999999988755 569999988765 46899999999999999999999999999998
Q ss_pred C--hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCcccccccc-----cchh---hcccCCCcc
Q 013471 302 G--LYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN-KNLIKLLEDAECTQLSEFHYC-----SQGM---IDKMHPRKC 370 (442)
Q Consensus 302 g--~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~-~~~v~~Ll~~~a~~~~~~~~~-----~~~~---~~~~~~~~~ 370 (442)
| +.+++++|++ |++++.+|..|+||||+|+..++ .+++++|+++|+......... .... ... .....
T Consensus 219 ~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~-~g~~~ 296 (446)
T PHA02946 219 TVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIIND-KGKQY 296 (446)
T ss_pred CCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHH-cCccc
Confidence 6 8899999995 99999999999999999999988 589999999997543221000 0000 000 11123
Q ss_pred eecCCCCCCccccccCceEEEccCcHHHHHHH
Q 013471 371 TVFPFHPWDEKVHRRHGIVLWVPHNIEELIKL 402 (442)
Q Consensus 371 ~~~~~h~~~~~~~~~~~~~~~lp~~~~~ll~~ 402 (442)
+.+|+|.|+..++ .+.++-|++.
T Consensus 297 ~~TpLh~Aa~~g~---------~eivk~Ll~~ 319 (446)
T PHA02946 297 DSTDFKMAVEVGS---------IRCVKYLLDN 319 (446)
T ss_pred CCCHHHHHHHcCC---------HHHHHHHHHC
Confidence 5589999988887 4555555553
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3e-33 Score=282.59 Aligned_cols=192 Identities=31% Similarity=0.393 Sum_probs=170.8
Q ss_pred hhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH--------------------------------
Q 013471 160 ELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYE-------------------------------- 207 (442)
Q Consensus 160 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~-------------------------------- 207 (442)
.+.||||.|+..|+.+++++|+++|+++|.+|..|.||||+||..|+.
T Consensus 36 ~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~e 115 (477)
T PHA02878 36 IPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVE 115 (477)
T ss_pred cCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHH
Confidence 466899999999999999999999999999999999999999876543
Q ss_pred --------------------------------HHHHHHHHcCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 013471 208 --------------------------------DITLFLIQKGVDINIKDKF-GNTPLLEAIKCGHDGVTSLLVKEGASLN 254 (442)
Q Consensus 208 --------------------------------~~v~~Ll~~ga~~~~~~~~-g~tpL~~A~~~~~~~iv~~Ll~~g~~~~ 254 (442)
+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++
T Consensus 116 i~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n 195 (477)
T PHA02878 116 IFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVN 195 (477)
T ss_pred HHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCC
Confidence 2677778888999988888 9999999999999999999999999988
Q ss_pred cCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHh-ChHHHHHHHHHCCCCCCCCCC-CCCCHHHH
Q 013471 255 VDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASE-GLYLMAKLLLEAGASVFTKDR-WGNTPLDE 330 (442)
Q Consensus 255 ~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~-g~~~iv~~Ll~~ga~~~~~~~-~g~tpl~~ 330 (442)
..+ +.||||.|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++. .|.||||+
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~ 275 (477)
T PHA02878 196 IPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHS 275 (477)
T ss_pred CcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHH
Confidence 754 56999999999999999999999999999999999999999976 689999999999999999886 79999999
Q ss_pred HHHcCCHHHHHHHHHcCCCcccc
Q 013471 331 GRMCGNKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 331 A~~~~~~~~v~~Ll~~~a~~~~~ 353 (442)
| .++.+++++|+++|++....
T Consensus 276 A--~~~~~~v~~Ll~~gadin~~ 296 (477)
T PHA02878 276 S--IKSERKLKLLLEYGADINSL 296 (477)
T ss_pred H--ccCHHHHHHHHHCCCCCCCc
Confidence 9 57889999999999975543
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=9.1e-33 Score=275.88 Aligned_cols=190 Identities=32% Similarity=0.382 Sum_probs=137.2
Q ss_pred cccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCC---------------
Q 013471 154 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGV--------------- 218 (442)
Q Consensus 154 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--------------- 218 (442)
++.....+.||||.|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|+++|+
T Consensus 28 ~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i 107 (434)
T PHA02874 28 INISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMI 107 (434)
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHH
Confidence 33444556777888888888888887777777777777777777777777777777777776554
Q ss_pred --------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 013471 219 --------DINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRD 288 (442)
Q Consensus 219 --------~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 288 (442)
+++.++..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|+++|++++..+
T Consensus 108 ~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~ 187 (434)
T PHA02874 108 KTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKD 187 (434)
T ss_pred HHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC
Confidence 345566777777777777777777777777777776643 4577777777777777777777777777777
Q ss_pred CCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 013471 289 YDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLE 344 (442)
Q Consensus 289 ~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll 344 (442)
..|+||||+|+..|+.+++++|+++|++++.++..|.||||.|+..++ +++++|+
T Consensus 188 ~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll 242 (434)
T PHA02874 188 NNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI 242 (434)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH
Confidence 777777777777777777777777777766666666666666665543 3444444
No 13
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=278.60 Aligned_cols=223 Identities=26% Similarity=0.317 Sum_probs=196.9
Q ss_pred hcccccccccchhhhhHHHHHHHhcC-CHHHHHHHHHcCCCCCCCCCCCChHHHHHH--HcCCHHHHHHHHHcCCCCCCC
Q 013471 147 KSDITFHIGKHEAELALRVNSAAYHG-DLYQLKGLIRAGADPNKTDYDGRSPLHLAT--SRGYEDITLFLIQKGVDINIK 223 (442)
Q Consensus 147 ~~~~~~~~~~~~~~~~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~~~~ 223 (442)
.-+....++..+..|.||||+|+..| +.+++++|+++|++++.++..|.||||+|+ ..++.+++++|+++|++++.+
T Consensus 69 Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~ 148 (471)
T PHA03095 69 LLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNAL 148 (471)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCcc
Confidence 33555677777788999999999999 599999999999999999999999999999 556899999999999999999
Q ss_pred CCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCcCC--CChHHHHHHHc--CCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 013471 224 DKFGNTPLLEAIKCG--HDGVTSLLVKEGASLNVDD--AGSFLCTAVAR--GDSDFLKRVLSNGVDPSSRDYDHRTPLHV 297 (442)
Q Consensus 224 ~~~g~tpL~~A~~~~--~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~ 297 (442)
+..|.||||+|+..+ +.+++++|+++|++++..+ +.||||.|+.. ++.++++.|+++|++++.+|..|+||||+
T Consensus 149 d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~ 228 (471)
T PHA03095 149 DLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHS 228 (471)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 999999999999876 5899999999999987754 56999999875 78899999999999999999999999999
Q ss_pred HHHhChH--HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccchhhcccCCCcceecCC
Q 013471 298 AASEGLY--LMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPF 375 (442)
Q Consensus 298 A~~~g~~--~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (442)
|+..|+. .+++.|+++|++++.+|..|+||||+|+..|+.+++++|+++|++.... +..+.+|+
T Consensus 229 Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~--------------~~~g~tpl 294 (471)
T PHA03095 229 MATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAV--------------SSDGNTPL 294 (471)
T ss_pred HHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc--------------CCCCCCHH
Confidence 9999864 6889999999999999999999999999999999999999999965433 33455677
Q ss_pred CCCCcccc
Q 013471 376 HPWDEKVH 383 (442)
Q Consensus 376 h~~~~~~~ 383 (442)
|.|...++
T Consensus 295 ~~A~~~~~ 302 (471)
T PHA03095 295 SLMVRNNN 302 (471)
T ss_pred HHHHHhCC
Confidence 77766665
No 14
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=1.3e-32 Score=281.62 Aligned_cols=198 Identities=19% Similarity=0.175 Sum_probs=175.2
Q ss_pred cccccc-hhhhhHHHHHHHh--cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCC
Q 013471 152 FHIGKH-EAELALRVNSAAY--HGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGY--EDITLFLIQKGVDINIKDKF 226 (442)
Q Consensus 152 ~~~~~~-~~~~~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll~~ga~~~~~~~~ 226 (442)
..++.. +..|.||||.|+. .++.+++++|+++|+++|.+|..|.||||+|++.|+ .++|++|+++||+++.++..
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~ 246 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVN 246 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 556665 7779999999865 468999999999999999999999999999999995 59999999999999999999
Q ss_pred CCcHHHHH-------------------------------------HHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHH
Q 013471 227 GNTPLLEA-------------------------------------IKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVA 267 (442)
Q Consensus 227 g~tpL~~A-------------------------------------~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~ 267 (442)
|.||||.| +..|+.+++++|+++|++++..+ +.||||+|+.
T Consensus 247 G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa 326 (764)
T PHA02716 247 GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYIL 326 (764)
T ss_pred CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHH
Confidence 99999975 34577899999999999998754 5699999865
Q ss_pred --cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH--------------hChHHHHHHHHHCCCCCCCCCCCCCCHHHH-
Q 013471 268 --RGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAAS--------------EGLYLMAKLLLEAGASVFTKDRWGNTPLDE- 330 (442)
Q Consensus 268 --~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~--------------~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~- 330 (442)
.++.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.+|..|+||||.
T Consensus 327 ~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y 406 (764)
T PHA02716 327 RHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSY 406 (764)
T ss_pred HhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHH
Confidence 468899999999999999999999999999875 368999999999999999999999999993
Q ss_pred ---HHHcCCHHHHHHHHHcCCC
Q 013471 331 ---GRMCGNKNLIKLLEDAECT 349 (442)
Q Consensus 331 ---A~~~~~~~~v~~Ll~~~a~ 349 (442)
|...++.+++++|++.|+.
T Consensus 407 ~~~a~n~~~~dIvklLis~~~~ 428 (764)
T PHA02716 407 ICTAQNYMYYDIIDCLISDKVL 428 (764)
T ss_pred HHHHHhcChHHHHHHHHhCcch
Confidence 3345789999999998753
No 15
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=272.23 Aligned_cols=206 Identities=24% Similarity=0.242 Sum_probs=181.2
Q ss_pred hHHHHHHH--hcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 013471 162 ALRVNSAA--YHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 239 (442)
Q Consensus 162 ~t~L~~A~--~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~ 239 (442)
.++||.++ ..++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~ 117 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDD 117 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCC
Confidence 56788766 4457899999999999999999999999999999999999999999999999999999999999998764
Q ss_pred --HHHHHHHHHcCCCCCc---CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhCh--HHHHHHHHH
Q 013471 240 --DGVTSLLVKEGASLNV---DDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGL--YLMAKLLLE 312 (442)
Q Consensus 240 --~~iv~~Ll~~g~~~~~---~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~--~~iv~~Ll~ 312 (442)
.+++++|+++|++++. .++.|||+ |+..++.+++++|++.|++++.+|..|+||||+|+..++ .+++++|++
T Consensus 118 ~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~ 196 (446)
T PHA02946 118 EVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMK 196 (446)
T ss_pred chHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHH
Confidence 7899999999999984 35678997 777899999999999999999999999999999987654 689999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCcccccccccchhhcccCCCcceecCCCCCCcccc
Q 013471 313 AGASVFTKDRWGNTPLDEGRMCG--NKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 383 (442)
Q Consensus 313 ~ga~~~~~~~~g~tpl~~A~~~~--~~~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 383 (442)
+|++++.+|..|+||||+|+..+ +.+++++|++ |++. ...+..+.+|+|.++..++
T Consensus 197 ~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadi--------------n~~d~~G~TpLh~A~~~~~ 254 (446)
T PHA02946 197 LGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDV--------------NKQNKFGDSPLTLLIKTLS 254 (446)
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCC--------------CCCCCCCCCHHHHHHHhCC
Confidence 99999999999999999999986 7899999985 6643 3344566677777666544
No 16
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=2.9e-32 Score=275.91 Aligned_cols=209 Identities=25% Similarity=0.260 Sum_probs=185.3
Q ss_pred HHhhhcccccccccchhhhhHHHHHHHhc-----CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC---CHHHHHHHH
Q 013471 143 LKQLKSDITFHIGKHEAELALRVNSAAYH-----GDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG---YEDITLFLI 214 (442)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~t~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll 214 (442)
..++.-+.+..++..+..|.||||.|+.. +..+++++|+++|+++|.+|..|.||||+|+..+ +.+++++|+
T Consensus 53 iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll 132 (489)
T PHA02798 53 IVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMI 132 (489)
T ss_pred HHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHH
Confidence 33333455677788888899999998864 6799999999999999999999999999999976 789999999
Q ss_pred HcCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCcCC---CChHHHHHHHc----CCHHHHHHHHHCCCC-
Q 013471 215 QKGVDINIKDKFGNTPLLEAIKCGH---DGVTSLLVKEGASLNVDD---AGSFLCTAVAR----GDSDFLKRVLSNGVD- 283 (442)
Q Consensus 215 ~~ga~~~~~~~~g~tpL~~A~~~~~---~~iv~~Ll~~g~~~~~~~---~~~~L~~A~~~----g~~~~v~~Ll~~g~~- 283 (442)
++|++++.+|..|.||||+|+..++ .+++++|+++|++++..+ +.||||.++.. ++.+++++|+++|++
T Consensus 133 ~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i 212 (489)
T PHA02798 133 ENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFII 212 (489)
T ss_pred HcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCc
Confidence 9999999999999999999999998 999999999999998753 45899988764 478889988887764
Q ss_pred --------------------------------------CCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCC
Q 013471 284 --------------------------------------PSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGN 325 (442)
Q Consensus 284 --------------------------------------~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~ 325 (442)
+|.+|..|+||||+|+..|+.+++++|+++|||++.+|..|+
T Consensus 213 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~ 292 (489)
T PHA02798 213 NKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGN 292 (489)
T ss_pred ccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCC
Confidence 445677899999999999999999999999999999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCcc
Q 013471 326 TPLDEGRMCGNKNLIKLLEDAECTQL 351 (442)
Q Consensus 326 tpl~~A~~~~~~~~v~~Ll~~~a~~~ 351 (442)
|||+.|+.+++.++++.|++++++..
T Consensus 293 TpL~~A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 293 TCLFTAFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred cHHHHHHHcCcHHHHHHHHccCCCHH
Confidence 99999999999999999999998764
No 17
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=3.1e-32 Score=275.49 Aligned_cols=233 Identities=25% Similarity=0.252 Sum_probs=207.4
Q ss_pred cccccccchhhhhHHHHHHHhcC---CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCCCCCCC
Q 013471 150 ITFHIGKHEAELALRVNSAAYHG---DLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG-YEDITLFLIQKGVDINIKDK 225 (442)
Q Consensus 150 ~~~~~~~~~~~~~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~ga~~~~~~~ 225 (442)
....++..+..|.||||.|+..| +.+++++|+++|+++|.++..|.||||+|+..| +.+++++|+++|++++.++.
T Consensus 36 ~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~ 115 (471)
T PHA03095 36 AGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDK 115 (471)
T ss_pred cCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCC
Confidence 34556677778999999999999 999999999999999999999999999999999 69999999999999999999
Q ss_pred CCCcHHHHHH--HcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 013471 226 FGNTPLLEAI--KCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARG--DSDFLKRVLSNGVDPSSRDYDHRTPLHVAA 299 (442)
Q Consensus 226 ~g~tpL~~A~--~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~ 299 (442)
.|.||||+|+ ..++.+++++|+++|++++..+ +.||||.|+..+ +.+++++|+++|++++..+..|+||||+|+
T Consensus 116 ~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~ 195 (471)
T PHA03095 116 VGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHL 195 (471)
T ss_pred CCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 9999999999 5567899999999999998754 569999998876 689999999999999999999999999999
Q ss_pred Hh--ChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCcccccccccchhhcccCCCcceecCC
Q 013471 300 SE--GLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK--NLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPF 375 (442)
Q Consensus 300 ~~--g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~--~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (442)
.. ++.++++.|+++|++++.+|..|+||||+|+..|+. .+++.|++.|++.. ..+..+.+|+
T Consensus 196 ~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din--------------~~d~~g~TpL 261 (471)
T PHA03095 196 QSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN--------------ARNRYGQTPL 261 (471)
T ss_pred HHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCC--------------CcCCCCCCHH
Confidence 75 788999999999999999999999999999999975 68889999988533 3345677899
Q ss_pred CCCCccccccCceEEEccCcHHHHHHHHhh
Q 013471 376 HPWDEKVHRRHGIVLWVPHNIEELIKLAVD 405 (442)
Q Consensus 376 h~~~~~~~~~~~~~~~lp~~~~~ll~~~~~ 405 (442)
|.|+..++ ++.++.|++.|++
T Consensus 262 h~A~~~~~---------~~~v~~LL~~gad 282 (471)
T PHA03095 262 HYAAVFNN---------PRACRRLIALGAD 282 (471)
T ss_pred HHHHHcCC---------HHHHHHHHHcCCC
Confidence 99888777 6677888876655
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=6.3e-32 Score=269.84 Aligned_cols=203 Identities=27% Similarity=0.293 Sum_probs=181.1
Q ss_pred ccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCC-----------------------CCCCCCCCCChHHHHHHHcC
Q 013471 149 DITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGA-----------------------DPNKTDYDGRSPLHLATSRG 205 (442)
Q Consensus 149 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-----------------------~~~~~~~~g~t~L~~A~~~g 205 (442)
+....++..+..+.||||.|+..|+.+++++|+++|+ +++.++..|.||||+|+..|
T Consensus 56 ~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~ 135 (434)
T PHA02874 56 KHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKG 135 (434)
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCC
Confidence 4445566667778999999999999999999988764 45677889999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCC
Q 013471 206 YEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVD 283 (442)
Q Consensus 206 ~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~ 283 (442)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+ +.||||.|+..|+.+++++|+++|++
T Consensus 136 ~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~ 215 (434)
T PHA02874 136 DLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNH 215 (434)
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999887654 56999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCcccc
Q 013471 284 PSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG-NKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 284 ~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~-~~~~v~~Ll~~~a~~~~~ 353 (442)
++.++..|.||||.|+..+. +.+++|+ .|++++.+|..|+||||+|+..+ +.+++++|+++|++....
T Consensus 216 i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~ 284 (434)
T PHA02874 216 IMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIK 284 (434)
T ss_pred CcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCC
Confidence 99999999999999998775 5666666 68999999999999999999876 789999999999975443
No 19
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=6.7e-32 Score=276.43 Aligned_cols=223 Identities=20% Similarity=0.189 Sum_probs=188.9
Q ss_pred hcccccccccchhhhhHHHHHHHhcCC--HHHHHHHHHcCCCCCCCCCCCChHHHHH-----------------------
Q 013471 147 KSDITFHIGKHEAELALRVNSAAYHGD--LYQLKGLIRAGADPNKTDYDGRSPLHLA----------------------- 201 (442)
Q Consensus 147 ~~~~~~~~~~~~~~~~t~L~~A~~~g~--~~~v~~Ll~~g~~~~~~~~~g~t~L~~A----------------------- 201 (442)
..+....++..+..|.||||+|+..|+ .+++++|+++|+++|.++..|.||||+|
T Consensus 198 LLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~ 277 (764)
T PHA02716 198 LCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK 277 (764)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc
Confidence 334567788888899999999999995 5999999999999999999999999975
Q ss_pred --------------HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCcCC--CChHHH
Q 013471 202 --------------TSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK--CGHDGVTSLLVKEGASLNVDD--AGSFLC 263 (442)
Q Consensus 202 --------------~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~--~~~~~iv~~Ll~~g~~~~~~~--~~~~L~ 263 (442)
++.|+.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++..+ +.||||
T Consensus 278 ~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH 357 (764)
T PHA02716 278 VKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLH 357 (764)
T ss_pred cccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHH
Confidence 45578899999999999999999999999999875 457899999999999998865 569999
Q ss_pred HHHH--------------cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH----HHhChHHHHHHHHHCCC----------
Q 013471 264 TAVA--------------RGDSDFLKRVLSNGVDPSSRDYDHRTPLHVA----ASEGLYLMAKLLLEAGA---------- 315 (442)
Q Consensus 264 ~A~~--------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A----~~~g~~~iv~~Ll~~ga---------- 315 (442)
+|+. .++.+++++|+++|++++.+|..|+||||.+ ...++.+++++|++.|+
T Consensus 358 ~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q 437 (764)
T PHA02716 358 TYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQ 437 (764)
T ss_pred HHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhh
Confidence 9875 3689999999999999999999999999942 23467899999888653
Q ss_pred ---------------------------------------------------CCCCCCCCCCCHHHHHHHcCCHH-----H
Q 013471 316 ---------------------------------------------------SVFTKDRWGNTPLDEGRMCGNKN-----L 339 (442)
Q Consensus 316 ---------------------------------------------------~~~~~~~~g~tpl~~A~~~~~~~-----~ 339 (442)
+++..|..|+||||+|+..|+.+ +
T Consensus 438 ~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~ 517 (764)
T PHA02716 438 DLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDS 517 (764)
T ss_pred hhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHH
Confidence 22445778999999999999874 4
Q ss_pred HHHHHHcCCCcccccccccchhhcccCCCcceecCCCCCCcccc
Q 013471 340 IKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 383 (442)
Q Consensus 340 v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 383 (442)
+++|+++|++.. .++..+.+|+|.|..+++
T Consensus 518 ~k~LL~~GADIN--------------~~d~~G~TPLh~A~~~g~ 547 (764)
T PHA02716 518 FVYLLSIQYNIN--------------IPTKNGVTPLMLTMRNNR 547 (764)
T ss_pred HHHHHhCCCCCc--------------ccCCCCCCHHHHHHHcCC
Confidence 599999999543 345677889998887775
No 20
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.98 E-value=6.3e-32 Score=261.05 Aligned_cols=188 Identities=34% Similarity=0.472 Sum_probs=142.5
Q ss_pred hHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCC
Q 013471 162 ALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKD-KFGNTPLLEAIKCGH 239 (442)
Q Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A~~~~~ 239 (442)
...++.|++.|+++.++.|++. |.+++..|.+|.|+||+||.+++.+++++|+++|+++|..+ .-+.||||+|+++|+
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~ 124 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH 124 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence 3457777777777777777777 77777777777777777777777777777777777777766 567777777777777
Q ss_pred HHHHHHHHHcCCCCCcCCCC--hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCC
Q 013471 240 DGVTSLLVKEGASLNVDDAG--SFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASV 317 (442)
Q Consensus 240 ~~iv~~Ll~~g~~~~~~~~~--~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~ 317 (442)
..++++|+++|++++..|.+ +++|.|++.|+..++-+|+.+|++++.+|.+|+||||+|+.+|+...++.|++.|+++
T Consensus 125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~ 204 (600)
T KOG0509|consen 125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASL 204 (600)
T ss_pred HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccc
Confidence 77777777777777776644 6777777777777777777777777777777777777777777776677777777777
Q ss_pred CCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 013471 318 FTKD-RWGNTPLDEGRMCGNKNLIKLLEDAECT 349 (442)
Q Consensus 318 ~~~~-~~g~tpl~~A~~~~~~~~v~~Ll~~~a~ 349 (442)
..+| ++|.||||+|+..|+..++++|++.|++
T Consensus 205 ~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~ 237 (600)
T KOG0509|consen 205 LLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGAD 237 (600)
T ss_pred cccccccCCchHHHHHhcCCcceEehhhhcCCc
Confidence 7776 6777777777777777777755554443
No 21
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=7.6e-32 Score=260.48 Aligned_cols=184 Identities=32% Similarity=0.401 Sum_probs=175.2
Q ss_pred ccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCc
Q 013471 151 TFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTD-YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNT 229 (442)
Q Consensus 151 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 229 (442)
....+..|.+|.|+||+||.+++++++++|+++|+++|... .-+.||||+|+++|+..+|.+|+++||||+.+|.+|.+
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~ 147 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLT 147 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCc
Confidence 67778888899999999999999999999999999999988 67899999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhChHHH
Q 013471 230 PLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRD-YDHRTPLHVAASEGLYLM 306 (442)
Q Consensus 230 pL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g~~~i 306 (442)
|||.|+..|+..++-+|+.+|++++.+| ++||||+|+.+|+...+..|+..|+.+...| ..|+||||+|+..|+..+
T Consensus 148 ~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~ 227 (600)
T KOG0509|consen 148 PLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTA 227 (600)
T ss_pred HHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcce
Confidence 9999999999999999999999999866 5699999999999999999999999999988 999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHc
Q 013471 307 AKLLLEAGASVFTKDRWGNTPLDEGRMC 334 (442)
Q Consensus 307 v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 334 (442)
+++|++.|++.+.+|.+|+||+++|...
T Consensus 228 v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 228 VKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred EehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9977788899999999999999999887
No 22
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=1.3e-31 Score=263.53 Aligned_cols=235 Identities=28% Similarity=0.310 Sum_probs=160.5
Q ss_pred ccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 013471 151 TFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTP 230 (442)
Q Consensus 151 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 230 (442)
+...+..+..+.+|+|+|+..|+.++++.|++.|+|+|..|..|.||||+||..++.|..+.|++.|+++...|.+|++|
T Consensus 111 gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~ 190 (929)
T KOG0510|consen 111 GADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFP 190 (929)
T ss_pred CCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCch
Confidence 34444455556677777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHH-----cCCCCCc--CCCChHHHHHHHcCCHHHHHHHHHCCCC---------------CCCCC
Q 013471 231 LLEAIKCGHDGVTSLLVK-----EGASLNV--DDAGSFLCTAVARGDSDFLKRVLSNGVD---------------PSSRD 288 (442)
Q Consensus 231 L~~A~~~~~~~iv~~Ll~-----~g~~~~~--~~~~~~L~~A~~~g~~~~v~~Ll~~g~~---------------~~~~~ 288 (442)
+|.|+++|..++.+..+. .+..++. ..+.+|||.|+..|+.++++.+++.|.. +|..|
T Consensus 191 iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d 270 (929)
T KOG0510|consen 191 IHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDED 270 (929)
T ss_pred HHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhccc
Confidence 777777777777777776 3333333 3445777777777777777777776532 23456
Q ss_pred CCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccccccchhhcccCC
Q 013471 289 YDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED-AECTQLSEFHYCSQGMIDKMHP 367 (442)
Q Consensus 289 ~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~-~~a~~~~~~~~~~~~~~~~~~~ 367 (442)
++|.||||+|+..|+.+++..|+..|++++.++.++.||||.|++.|+.++|+.|++ .+.. ..+..
T Consensus 271 ~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~r-------------llne~ 337 (929)
T KOG0510|consen 271 NDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTR-------------LLNES 337 (929)
T ss_pred ccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCcc-------------ccccc
Confidence 777777777777777777777777777777777777777777777777777777776 2221 22233
Q ss_pred CcceecCCCCCCccccccCceEEEccCcHHHHHHHHhhhc
Q 013471 368 RKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVDKL 407 (442)
Q Consensus 368 ~~~~~~~~h~~~~~~~~~~~~~~~lp~~~~~ll~~~~~k~ 407 (442)
+-.+.+|+|.++..+| -+.++-|++-|+...
T Consensus 338 D~~g~tpLHlaa~~gH---------~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 338 DLHGMTPLHLAAKSGH---------DRVVQLLLNKGALFL 368 (929)
T ss_pred cccCCCchhhhhhcCH---------HHHHHHHHhcChhhh
Confidence 3455667777776666 445555665555444
No 23
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=6.8e-31 Score=276.60 Aligned_cols=240 Identities=23% Similarity=0.215 Sum_probs=202.9
Q ss_pred HHhhhcccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHH--------
Q 013471 143 LKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLI-------- 214 (442)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-------- 214 (442)
+.++..+....++..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+
T Consensus 160 i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~ 239 (682)
T PHA02876 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINK 239 (682)
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 334444566777788888999999999999999999999999999999999999999999998887776654
Q ss_pred ---------------------HcCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCCcCC--CChHHHHHHHcC-
Q 013471 215 ---------------------QKGVDINIKDKFGNTPLLEAIKCGHD-GVTSLLVKEGASLNVDD--AGSFLCTAVARG- 269 (442)
Q Consensus 215 ---------------------~~ga~~~~~~~~g~tpL~~A~~~~~~-~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g- 269 (442)
+.|++++..+..|.||||+|+..++. +++++|++.|++++..+ +.||||+|+..|
T Consensus 240 ~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~ 319 (682)
T PHA02876 240 NDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGY 319 (682)
T ss_pred CcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCC
Confidence 45667788888999999999999986 69999999999988754 569999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHh-ChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 013471 270 DSDFLKRVLSNGVDPSSRDYDHRTPLHVAASE-GLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 348 (442)
Q Consensus 270 ~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~-g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a 348 (442)
+.++++.|+..|++++.++..|.||||+|+.. ++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 320 ~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~ga 399 (682)
T PHA02876 320 DTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGA 399 (682)
T ss_pred CHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 69999999999999999999999999999986 47899999999999999999999999999999999999999999999
Q ss_pred Ccccccccccchh--------------------hcccCCCcceecCCCCCCccc
Q 013471 349 TQLSEFHYCSQGM--------------------IDKMHPRKCTVFPFHPWDEKV 382 (442)
Q Consensus 349 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~h~~~~~~ 382 (442)
+...........+ .+....+..+.+|+|.|+..+
T Consensus 400 d~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 400 DIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred CccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 8754332211110 133445667888888887654
No 24
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=8.4e-31 Score=264.73 Aligned_cols=170 Identities=32% Similarity=0.392 Sum_probs=156.5
Q ss_pred HHHHHHHcCCCCCCCCCC-CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 013471 176 QLKGLIRAGADPNKTDYD-GRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLN 254 (442)
Q Consensus 176 ~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~ 254 (442)
++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|++.|++++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 666777788999999988 9999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC--CChHHHHHHHc-CCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q 013471 255 VDD--AGSFLCTAVAR-GDSDFLKRVLSNGVDPSSRDY-DHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDE 330 (442)
Q Consensus 255 ~~~--~~~~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~-~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~ 330 (442)
..+ +.||||+|+.. ++.+++++|+++|++++.++. .|.||||+| .++.+++++|+++|+|++.+|..|+||||+
T Consensus 229 ~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~ 306 (477)
T PHA02878 229 ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSS 306 (477)
T ss_pred CCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 765 56999999976 799999999999999999886 799999999 577899999999999999999999999999
Q ss_pred HHHcC-CHHHHHHHHHcC
Q 013471 331 GRMCG-NKNLIKLLEDAE 347 (442)
Q Consensus 331 A~~~~-~~~~v~~Ll~~~ 347 (442)
|+..+ ..+++++|+.+.
T Consensus 307 A~~~~~~~~~~~~li~~~ 324 (477)
T PHA02878 307 AVKQYLCINIGRILISNI 324 (477)
T ss_pred HHHHcCccchHHHHHHHH
Confidence 99864 567888888764
No 25
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.7e-30 Score=263.36 Aligned_cols=204 Identities=18% Similarity=0.239 Sum_probs=173.9
Q ss_pred hhcccccccccchhhhhHHHHHHHhc---CCHHHHHHHHHcCCCC-CCCCCCCChHHHHHHHc--CCHHHHHHHHHcCCC
Q 013471 146 LKSDITFHIGKHEAELALRVNSAAYH---GDLYQLKGLIRAGADP-NKTDYDGRSPLHLATSR--GYEDITLFLIQKGVD 219 (442)
Q Consensus 146 ~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~ga~ 219 (442)
+.-+.+..++..+..|.||||.|+.. |+.+++++|+++|+++ +.+|..|.||||+|+.. ++.+++++|+++|++
T Consensus 93 ~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gad 172 (494)
T PHA02989 93 LLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVN 172 (494)
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCC
Confidence 33345566777777889999988765 6789999999999999 78888999999998764 588999999999999
Q ss_pred CCC-CCCCCCcHHHHHHHcC----CHHHHHHHHHcCCCCCcCC--CChHHHHHHHc------CCHHHHHHHHHCCCCCCC
Q 013471 220 INI-KDKFGNTPLLEAIKCG----HDGVTSLLVKEGASLNVDD--AGSFLCTAVAR------GDSDFLKRVLSNGVDPSS 286 (442)
Q Consensus 220 ~~~-~~~~g~tpL~~A~~~~----~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~------g~~~~v~~Ll~~g~~~~~ 286 (442)
++. .+..|.||||.|++.+ +.+++++|+++|++++..+ +.++|+.++.. +..+++++|+. |++++.
T Consensus 173 i~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~ 251 (494)
T PHA02989 173 LFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINK 251 (494)
T ss_pred ccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCC
Confidence 987 6788999999887764 7899999999999888766 46888876654 35677776654 699999
Q ss_pred CCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q 013471 287 RDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 350 (442)
Q Consensus 287 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~ 350 (442)
+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..|+.+++++|++.++..
T Consensus 252 ~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~ 315 (494)
T PHA02989 252 KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGK 315 (494)
T ss_pred CCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCh
Confidence 9999999999999999999999999999999999999999999999999999999999988653
No 26
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=5.2e-31 Score=259.29 Aligned_cols=239 Identities=23% Similarity=0.294 Sum_probs=214.0
Q ss_pred cccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHH-----cCCCCCC
Q 013471 148 SDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQ-----KGVDINI 222 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~ 222 (442)
-+...+++-++..+.||||.||..++.|..+.|++.|+++-..|.+|.+|+|.|+++|..++.+..+. ++..+|.
T Consensus 141 l~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~ 220 (929)
T KOG0510|consen 141 LDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINF 220 (929)
T ss_pred HHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhccccc
Confidence 34557788889999999999999999998899999999999999999999999999999999999998 6788999
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-----------------CCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q 013471 223 KDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNV-----------------DDAGSFLCTAVARGDSDFLKRVLSNGVDPS 285 (442)
Q Consensus 223 ~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~-----------------~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~ 285 (442)
-+..|.||||.|+..|+.++++..++.|..... .++.||||+||+.|+.++++.|+..|++++
T Consensus 221 ~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~ 300 (929)
T KOG0510|consen 221 DNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASIN 300 (929)
T ss_pred ccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccc
Confidence 999999999999999999999999998764322 346799999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhChHHHHHHHHH-CC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccchhhc
Q 013471 286 SRDYDHRTPLHVAASEGLYLMAKLLLE-AG-ASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMID 363 (442)
Q Consensus 286 ~~~~~g~t~Lh~A~~~g~~~iv~~Ll~-~g-a~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~~~~~~ 363 (442)
.++.++.||||.||..|+..+|+.|++ .| ...+..|-.|.||||+|+++||..+++.|++.||......
T Consensus 301 ~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~--------- 371 (929)
T KOG0510|consen 301 SKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMS--------- 371 (929)
T ss_pred ccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhccc---------
Confidence 999999999999999999999999999 55 5578889999999999999999999999999999755410
Q ss_pred ccCCCcceecCCCCCCccccccCceEEEccCcHHHHHHHHhhh
Q 013471 364 KMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVDK 406 (442)
Q Consensus 364 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~lp~~~~~ll~~~~~k 406 (442)
..+..+.+++|.|+..++ +..++-|++.|++-
T Consensus 372 --e~D~dg~TaLH~Aa~~g~---------~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 372 --EADSDGNTALHLAAKYGN---------TSAVQKLISHGADI 403 (929)
T ss_pred --ccccCCchhhhHHHHhcc---------HHHHHHHHHcCCce
Confidence 125677889999999888 88899999877653
No 27
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.9e-30 Score=231.09 Aligned_cols=175 Identities=17% Similarity=0.199 Sum_probs=157.9
Q ss_pred hhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCCC-CCCCcHHHHH
Q 013471 158 EAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG--YEDITLFLIQKGVDINIKD-KFGNTPLLEA 234 (442)
Q Consensus 158 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A 234 (442)
.+.+.||||.|+..|+.+.|+.|++. ++..+..|.||||+|+..+ +.+++++|+++|++++.++ ..|.||||+|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 44567899999999999999999975 5667889999999999865 8999999999999999997 5899999998
Q ss_pred HHc---CCHHHHHHHHHcCCCCCcCC--CChHHHHHHH--cCCHHHHHHHHHCCCCCCCCCCCCCcHHHH-HHHhChHHH
Q 013471 235 IKC---GHDGVTSLLVKEGASLNVDD--AGSFLCTAVA--RGDSDFLKRVLSNGVDPSSRDYDHRTPLHV-AASEGLYLM 306 (442)
Q Consensus 235 ~~~---~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~-A~~~g~~~i 306 (442)
+.. ++.+++++|+++|++++..+ +.||||.|+. .++.+++++|+++|++++.+|.+|.||||. |+..++.++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 764 47999999999999999865 5699999886 468999999999999999999999999996 566789999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Q 013471 307 AKLLLEAGASVFTKDRWGNTPLDEGRMCG 335 (442)
Q Consensus 307 v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 335 (442)
+++|+++|++++.+|..|+||+++|..++
T Consensus 175 v~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 175 FDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 99999999999999999999999998765
No 28
>PHA02795 ankyrin-like protein; Provisional
Probab=99.97 E-value=3.8e-30 Score=247.42 Aligned_cols=184 Identities=19% Similarity=0.055 Sum_probs=169.9
Q ss_pred HHHhcCCHHHHHHHHHcCCCCC------CCCCCCChHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 013471 167 SAAYHGDLYQLKGLIRAGADPN------KTDYDGRSPLHLATS--RGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 238 (442)
Q Consensus 167 ~A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~--~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 238 (442)
.|+..+..++++.|+++|++++ .++..++|+||+|+. .|+.++|++|+++||+++.. .+.||+|.|+..+
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~ 160 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKK 160 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcC
Confidence 8999999999999999999988 778889999999999 89999999999999999984 4589999999999
Q ss_pred CHHHHHHHHHcCCCCCcCC--------CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHH
Q 013471 239 HDGVTSLLVKEGASLNVDD--------AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLL 310 (442)
Q Consensus 239 ~~~iv~~Ll~~g~~~~~~~--------~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~L 310 (442)
+.+++++|+++|++..... +.+++|.|+..++.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|
T Consensus 161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelL 240 (437)
T PHA02795 161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWL 240 (437)
T ss_pred cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999998543221 45789999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHcC--------CHHHHHHHHHcCCCccc
Q 013471 311 LEAGASVFTKDRWGNTPLDEGRMCG--------NKNLIKLLEDAECTQLS 352 (442)
Q Consensus 311 l~~ga~~~~~~~~g~tpl~~A~~~~--------~~~~v~~Ll~~~a~~~~ 352 (442)
+++|++++.+|..|+||||+|+..| +.+++++|+++|++...
T Consensus 241 L~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 241 LENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999998 46999999999986543
No 29
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.3e-30 Score=262.37 Aligned_cols=218 Identities=16% Similarity=0.142 Sum_probs=184.3
Q ss_pred cccccccchhhhhHHHHHHHhcC------CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCC
Q 013471 150 ITFHIGKHEAELALRVNSAAYHG------DLYQLKGLIRAGADPNKTDYDGRSPLHLATSR---GYEDITLFLIQKGVDI 220 (442)
Q Consensus 150 ~~~~~~~~~~~~~t~L~~A~~~g------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~ 220 (442)
.+..++..+ .+.||||.|+..+ ..+++++|+++|+++|.++..|.||||.|+.. |+.+++++|+++|+++
T Consensus 59 ~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadi 137 (494)
T PHA02989 59 NGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINV 137 (494)
T ss_pred cCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCc
Confidence 344444433 4689999998754 47899999999999999999999999988765 6799999999999999
Q ss_pred -CCCCCCCCcHHHHHHHc--CCHHHHHHHHHcCCCCCcC---CCChHHHHHHHcC----CHHHHHHHHHCCCCCCCCCCC
Q 013471 221 -NIKDKFGNTPLLEAIKC--GHDGVTSLLVKEGASLNVD---DAGSFLCTAVARG----DSDFLKRVLSNGVDPSSRDYD 290 (442)
Q Consensus 221 -~~~~~~g~tpL~~A~~~--~~~~iv~~Ll~~g~~~~~~---~~~~~L~~A~~~g----~~~~v~~Ll~~g~~~~~~~~~ 290 (442)
+.++..|.||||+|+.. ++.+++++|+++|++++.. .+.||||.|+..+ +.+++++|+++|++++.++..
T Consensus 138 n~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~ 217 (494)
T PHA02989 138 NDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNG 217 (494)
T ss_pred ccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCc
Confidence 89999999999998765 5799999999999998772 4679999998764 899999999999999999999
Q ss_pred CCcHHHHHHHhC------hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccchhhcc
Q 013471 291 HRTPLHVAASEG------LYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDK 364 (442)
Q Consensus 291 g~t~Lh~A~~~g------~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~~~~~~~ 364 (442)
|.|+||.++..+ ..+++++|+. |++++.+|..|+||||+|+..|+.+++++|+++|++....
T Consensus 218 ~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~----------- 285 (494)
T PHA02989 218 SESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNV----------- 285 (494)
T ss_pred cccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcccc-----------
Confidence 999999877643 5678887665 6999999999999999999999999999999999965443
Q ss_pred cCCCcceecCCCCCCcccc
Q 013471 365 MHPRKCTVFPFHPWDEKVH 383 (442)
Q Consensus 365 ~~~~~~~~~~~h~~~~~~~ 383 (442)
+..+.+|+|.|...++
T Consensus 286 ---d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 286 ---SKDGDTVLTYAIKHGN 301 (494)
T ss_pred ---CCCCCCHHHHHHHcCC
Confidence 3445667777766555
No 30
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=7.2e-30 Score=268.83 Aligned_cols=207 Identities=25% Similarity=0.297 Sum_probs=186.4
Q ss_pred ccccccccchhhhhHHHHHHHhcCCH-HHHHHHHHcCCCCCCCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCC
Q 013471 149 DITFHIGKHEAELALRVNSAAYHGDL-YQLKGLIRAGADPNKTDYDGRSPLHLATSRG-YEDITLFLIQKGVDINIKDKF 226 (442)
Q Consensus 149 ~~~~~~~~~~~~~~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~ga~~~~~~~~ 226 (442)
+.....+..+..|.||||+|+..|+. +++++|++.|++++.+|..|.||||+|+..| ..+++++|+..|++++..+..
T Consensus 261 ~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~ 340 (682)
T PHA02876 261 DAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRL 340 (682)
T ss_pred HCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccC
Confidence 34455667777899999999999986 5899999999999999999999999999999 599999999999999999999
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhCh
Q 013471 227 GNTPLLEAIKC-GHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGL 303 (442)
Q Consensus 227 g~tpL~~A~~~-~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~ 303 (442)
|.||||+|+.. ++.+++++|++.|++++..+ +.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 341 g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~ 420 (682)
T PHA02876 341 YITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTN 420 (682)
T ss_pred CCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCC
Confidence 99999999986 46889999999999998865 5699999999999999999999999999999999999999997665
Q ss_pred -HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCcccccc
Q 013471 304 -YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG-NKNLIKLLEDAECTQLSEFH 355 (442)
Q Consensus 304 -~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~-~~~~v~~Ll~~~a~~~~~~~ 355 (442)
..++++|+++|++++.+|..|+||||+|+..+ +.+++++|+++|++......
T Consensus 421 ~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~ 474 (682)
T PHA02876 421 PYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINI 474 (682)
T ss_pred HHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCC
Confidence 57899999999999999999999999999977 68999999999998665443
No 31
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=3.4e-30 Score=260.81 Aligned_cols=209 Identities=21% Similarity=0.191 Sum_probs=177.4
Q ss_pred hhHHHH--HHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc-----CCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 013471 161 LALRVN--SAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSR-----GYEDITLFLIQKGVDINIKDKFGNTPLLE 233 (442)
Q Consensus 161 ~~t~L~--~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-----g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~ 233 (442)
+.|+++ .+...++.+++++|+++|+++|.++..|.||||.|+.+ ++.+++++|+++|++++.++..|.||||+
T Consensus 36 ~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~ 115 (489)
T PHA02798 36 EYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYC 115 (489)
T ss_pred cchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHH
Confidence 344554 33445689999999999999999999999999999864 67999999999999999999999999999
Q ss_pred HHHcC---CHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCC---HHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhC--
Q 013471 234 AIKCG---HDGVTSLLVKEGASLNVDD--AGSFLCTAVARGD---SDFLKRVLSNGVDPSSRD-YDHRTPLHVAASEG-- 302 (442)
Q Consensus 234 A~~~~---~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~---~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g-- 302 (442)
|+..+ +.+++++|+++|++++..+ +.||||+|+..++ .+++++|+++|++++.++ ..|.||||.++..+
T Consensus 116 a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~ 195 (489)
T PHA02798 116 LLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNID 195 (489)
T ss_pred HHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccc
Confidence 99986 6899999999999998865 5699999999998 999999999999999885 57899999987654
Q ss_pred --hHHHHHHHHHCCCCC---------------------------------------CCCCCCCCCHHHHHHHcCCHHHHH
Q 013471 303 --LYLMAKLLLEAGASV---------------------------------------FTKDRWGNTPLDEGRMCGNKNLIK 341 (442)
Q Consensus 303 --~~~iv~~Ll~~ga~~---------------------------------------~~~~~~g~tpl~~A~~~~~~~~v~ 341 (442)
+.+++++|+++|+++ |.+|..|+||||+|+..|+.++++
T Consensus 196 ~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~ 275 (489)
T PHA02798 196 RIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFE 275 (489)
T ss_pred cCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHH
Confidence 789999999887654 446778999999999999999999
Q ss_pred HHHHcCCCcccccccccchhhcccCCCcceecCCCCCCcccc
Q 013471 342 LLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 383 (442)
Q Consensus 342 ~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 383 (442)
+|+++||+.... +..+.+|+|.|...++
T Consensus 276 ~LL~~GAdin~~--------------d~~G~TpL~~A~~~~~ 303 (489)
T PHA02798 276 YLLQLGGDINII--------------TELGNTCLFTAFENES 303 (489)
T ss_pred HHHHcCCccccc--------------CCCCCcHHHHHHHcCc
Confidence 999999975443 2344556666554443
No 32
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=1.4e-30 Score=241.88 Aligned_cols=192 Identities=26% Similarity=0.389 Sum_probs=175.3
Q ss_pred chhhhhHHHHHHHhcCCHHHHHHHHHc-CCCCCCC--------CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 013471 157 HEAELALRVNSAAYHGDLYQLKGLIRA-GADPNKT--------DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFG 227 (442)
Q Consensus 157 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~--------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 227 (442)
....|.|||..||++|+.++|++|+++ ++++... .-.|-+||..|+..||.++||.|+++|+++|......
T Consensus 38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TN 117 (615)
T KOG0508|consen 38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTN 117 (615)
T ss_pred cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccC
Confidence 445577999999999999999999994 6666433 3468899999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHH
Q 013471 228 NTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYL 305 (442)
Q Consensus 228 ~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~ 305 (442)
.|||..||.-|+.+++++|+++|+|++..+ +.|.||.||.+|+.+++++|++.|+|+|.++..|+|+||.|++.|+.+
T Consensus 118 StPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vd 197 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVD 197 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHH
Confidence 999999999999999999999999998865 569999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 013471 306 MAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECT 349 (442)
Q Consensus 306 iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~ 349 (442)
++++|+.+|+.+.. |..|.|||..|+..|+.++|++|++...+
T Consensus 198 ivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~~~~s 240 (615)
T KOG0508|consen 198 IVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQCETS 240 (615)
T ss_pred HHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhcCCcc
Confidence 99999999998765 55699999999999999999999974443
No 33
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=2.8e-28 Score=251.27 Aligned_cols=194 Identities=19% Similarity=0.133 Sum_probs=165.9
Q ss_pred cccchhhhhHHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHH----HHHHHHHcCCCCCCCCCC
Q 013471 154 IGKHEAELALRVNSAAYH---GDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYED----ITLFLIQKGVDINIKDKF 226 (442)
Q Consensus 154 ~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~ga~~~~~~~~ 226 (442)
.+..+..|.||||+|+.. |+.+++++|+++|++++..+..|.||||+|+..|+.+ +++.|++.+...+..+
T Consensus 25 ~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~-- 102 (661)
T PHA02917 25 NDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND-- 102 (661)
T ss_pred ccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC--
Confidence 356677899999997555 8899999999999999999999999999999999854 5678888754445433
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHH--HcCCHHHHHHHHHCCCCCCCCCC---CC--------
Q 013471 227 GNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAV--ARGDSDFLKRVLSNGVDPSSRDY---DH-------- 291 (442)
Q Consensus 227 g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~--~~g~~~~v~~Ll~~g~~~~~~~~---~g-------- 291 (442)
..+++++|+..++.+++++|+++|++++..+ +.||||.|+ ..|+.+++++|+++|++++.+|. .|
T Consensus 103 ~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~ 182 (661)
T PHA02917 103 FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQP 182 (661)
T ss_pred cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccc
Confidence 2377888999999999999999999999854 679999654 57899999999999999986653 34
Q ss_pred ---CcHHHHHHH-----------hChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCc
Q 013471 292 ---RTPLHVAAS-----------EGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK--NLIKLLEDAECTQ 350 (442)
Q Consensus 292 ---~t~Lh~A~~-----------~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~--~~v~~Ll~~~a~~ 350 (442)
.||||+|+. .++.++|++|+++|++++.+|..|+||||+|+.+|+. ++|++|++ |++.
T Consensus 183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~ 256 (661)
T PHA02917 183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDN 256 (661)
T ss_pred cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcc
Confidence 599999986 4689999999999999999999999999999999985 79999986 7644
No 34
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=4.5e-29 Score=231.82 Aligned_cols=202 Identities=27% Similarity=0.328 Sum_probs=175.9
Q ss_pred HHHhcCCHHHHHHHHHcCCCC-----CCCCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCC--------CCCCcHHH
Q 013471 167 SAAYHGDLYQLKGLIRAGADP-----NKTDYDGRSPLHLATSRGYEDITLFLIQ-KGVDINIKD--------KFGNTPLL 232 (442)
Q Consensus 167 ~A~~~g~~~~v~~Ll~~g~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~--------~~g~tpL~ 232 (442)
.|++.|++..++.|+.+..+. -....+|.|||.+||++||.++|++|++ .++++.... -.|.+||.
T Consensus 10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLW 89 (615)
T KOG0508|consen 10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLW 89 (615)
T ss_pred HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhh
Confidence 688888888888887654321 1234568899999999999999999999 488876542 46889999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHH
Q 013471 233 EAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLL 310 (442)
Q Consensus 233 ~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~L 310 (442)
.|+..||.++|+.|+++|+++|... +.|||-.||.-|+.+++++|+++|+|++..|+.|.|.||+||.+|+.+|+++|
T Consensus 90 aAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyL 169 (615)
T KOG0508|consen 90 AASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYL 169 (615)
T ss_pred HHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHH
Confidence 9999999999999999999999754 34999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccchhhcccCCCcceecCCCCCCcccc
Q 013471 311 LEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 383 (442)
Q Consensus 311 l~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 383 (442)
++.|+|+|.++..|+|+||.|+..|+.+++++|+++|+.... +.-+.+|+-.|+..++
T Consensus 170 le~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~---------------d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 170 LEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV---------------DGHGMTPLLLAAVTGH 227 (615)
T ss_pred HHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee---------------cCCCCchHHHHhhhcc
Confidence 999999999999999999999999999999999999985332 2336677777777777
No 35
>PHA02917 ankyrin-like protein; Provisional
Probab=99.95 E-value=1e-27 Score=247.15 Aligned_cols=196 Identities=20% Similarity=0.228 Sum_probs=168.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHH
Q 013471 174 LYQLKGLIRAGADPNKTDYDGRSPLHLATSR---GYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD----GVTSLL 246 (442)
Q Consensus 174 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~----~iv~~L 246 (442)
++.++.|+..|..++..|..|.||||+|+.. |+.++|++|+++|++++.++..|.||||+|+..|+. ++++.|
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~L 91 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMAL 91 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHH
Confidence 5678899999998998899999999998665 789999999999999999999999999999999984 466888
Q ss_pred HHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH--HhChHHHHHHHHHCCCCCCCCCC--
Q 013471 247 VKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAA--SEGLYLMAKLLLEAGASVFTKDR-- 322 (442)
Q Consensus 247 l~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~--~~g~~~iv~~Ll~~ga~~~~~~~-- 322 (442)
++.+...+..+..++++.|+.+++.+++++|+++|++++.+|.+|+||||.|+ ..|+.+++++|+++|++++.+|.
T Consensus 92 l~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~ 171 (661)
T PHA02917 92 LEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDD 171 (661)
T ss_pred HhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccc
Confidence 88765556666667888999999999999999999999999999999999654 57899999999999999987654
Q ss_pred -CC-----------CCHHHHHHH-----------cCCHHHHHHHHHcCCCcccccccccchhhcccCCCcceecCCCCCC
Q 013471 323 -WG-----------NTPLDEGRM-----------CGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWD 379 (442)
Q Consensus 323 -~g-----------~tpl~~A~~-----------~~~~~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 379 (442)
.| .||||+|+. .++.+++++|+++|++.. ..+..+.+|+|.+.
T Consensus 172 ~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn--------------~~d~~G~TpLh~A~ 237 (661)
T PHA02917 172 EYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPS--------------SIDKNYCTALQYYI 237 (661)
T ss_pred ccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcc--------------cCCCCCCcHHHHHH
Confidence 34 599999986 468999999999999643 33456677888888
Q ss_pred cccc
Q 013471 380 EKVH 383 (442)
Q Consensus 380 ~~~~ 383 (442)
..++
T Consensus 238 ~~g~ 241 (661)
T PHA02917 238 KSSH 241 (661)
T ss_pred HcCC
Confidence 7776
No 36
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=4.5e-27 Score=210.46 Aligned_cols=159 Identities=19% Similarity=0.215 Sum_probs=142.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCcCC---CChHHHHH
Q 013471 191 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG--HDGVTSLLVKEGASLNVDD---AGSFLCTA 265 (442)
Q Consensus 191 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~--~~~iv~~Ll~~g~~~~~~~---~~~~L~~A 265 (442)
.+.+.||||+|+..|+.++|+.|++. ++..+..|.||||+|+..+ +.+++++|+++|++++..+ +.||||+|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 35679999999999999999999986 4667889999999999865 8999999999999999763 56999998
Q ss_pred HHc---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH--hChHHHHHHHHHCCCCCCCCCCCCCCHHHH-HHHcCCHHH
Q 013471 266 VAR---GDSDFLKRVLSNGVDPSSRDYDHRTPLHVAAS--EGLYLMAKLLLEAGASVFTKDRWGNTPLDE-GRMCGNKNL 339 (442)
Q Consensus 266 ~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~--~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~-A~~~~~~~~ 339 (442)
+.. ++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 764 47999999999999999999999999999986 468999999999999999999999999995 567889999
Q ss_pred HHHHHHcCCCccc
Q 013471 340 IKLLEDAECTQLS 352 (442)
Q Consensus 340 v~~Ll~~~a~~~~ 352 (442)
+++|+++|++...
T Consensus 175 v~~Ll~~Gadi~~ 187 (209)
T PHA02859 175 FDFLTSLGIDINE 187 (209)
T ss_pred HHHHHHcCCCCCC
Confidence 9999999986443
No 37
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.95 E-value=3.3e-28 Score=245.27 Aligned_cols=74 Identities=46% Similarity=0.688 Sum_probs=68.8
Q ss_pred CEeeeccC----------CCCChhHHHHHHHHHHHHHHhhhceeeEEeCCceEEEechHHHHHHHHhhhhhhhhhhcCcH
Q 013471 1 MEFAFFRG----------LPENLSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPW 70 (442)
Q Consensus 1 ~~~~f~~~----------~~~~~~~~~~~~~~~~~~d~~~~f~~~~~~~~~~~~v~~~~~i~~~y~~~~~~~d~~~~~p~ 70 (442)
|+++|+.. ...+|.++|.++|++|++||++||||||+++.++++|.||++||+||+++||++|+++++|+
T Consensus 97 ~~f~f~~~~~~~~~~d~~~~~~l~v~d~ivD~fflvdIvL~Frtayv~~~s~elV~dpk~IA~rYl~twFiiDlis~lP~ 176 (727)
T KOG0498|consen 97 LFFYFLLIDDERKCIDGKLAAPLTVLDTIVDIFFLVDIVLNFRTAYVDPSSYELVDDPKKIAKRYLKTWFLIDLISTLPF 176 (727)
T ss_pred ceeeEEecccccccccccccCceeeHHHHHHHHHHHHHHHhheEEEECCCCceeeeCHHHHHHHHHhhhHHHHHHHhcCh
Confidence 56778765 55779999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 013471 71 DVIY 74 (442)
Q Consensus 71 ~~~~ 74 (442)
+.++
T Consensus 177 ~~i~ 180 (727)
T KOG0498|consen 177 DQIV 180 (727)
T ss_pred hhhe
Confidence 9883
No 38
>PHA02730 ankyrin-like protein; Provisional
Probab=99.95 E-value=5.2e-27 Score=236.19 Aligned_cols=190 Identities=14% Similarity=0.130 Sum_probs=164.1
Q ss_pred cchhhhhHHHHHHHhcC---CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCC--CCCCCCCCCC
Q 013471 156 KHEAELALRVNSAAYHG---DLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG--YEDITLFLIQKGV--DINIKDKFGN 228 (442)
Q Consensus 156 ~~~~~~~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga--~~~~~~~~g~ 228 (442)
..+..|.||||+|+..| +.+++++|+++||+++.+|..|.||||+|+..+ +.++|++|+++|+ +++..+..+.
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d 115 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND 115 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence 55667999999999997 599999999999999999999999999999977 7999999999965 4577788899
Q ss_pred cHHHHHHH--cCCHHHHHHHHH-cCCCCCcC-------CCChHHHHHHHcCCHHHHHHHHHCCCCCC-------CCCCCC
Q 013471 229 TPLLEAIK--CGHDGVTSLLVK-EGASLNVD-------DAGSFLCTAVARGDSDFLKRVLSNGVDPS-------SRDYDH 291 (442)
Q Consensus 229 tpL~~A~~--~~~~~iv~~Ll~-~g~~~~~~-------~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~g 291 (442)
+|||.++. +++.+++++|+. .+++++.. .+.+|++.+...++.++|++|+++|++++ ..+..+
T Consensus 116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~ 195 (672)
T PHA02730 116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDR 195 (672)
T ss_pred chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCc
Confidence 99999998 888999999997 66776654 34689999999999999999999999995 133334
Q ss_pred C-cHHHHHH------HhChHHHHHHHHHCCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHH
Q 013471 292 R-TPLHVAA------SEGLYLMAKLLLEAGASVFTKDRWGNTPLDE--GRMCGNKNLIKLLED 345 (442)
Q Consensus 292 ~-t~Lh~A~------~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~--A~~~~~~~~v~~Ll~ 345 (442)
. |.||++. ..++.|++++|+++||++|.+|..|+||||+ |...|+.|++++|++
T Consensus 196 c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 196 CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 4 5566443 4578999999999999999999999999995 556678999999999
No 39
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.95 E-value=3.3e-28 Score=253.74 Aligned_cols=198 Identities=33% Similarity=0.404 Sum_probs=114.5
Q ss_pred cccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 013471 154 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG-YEDITLFLIQKGVDINIKDKFGNTPLL 232 (442)
Q Consensus 154 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 232 (442)
.+.....|.||||.|+..++..+++.++++|++++..+..|.||+|.|+..| ..+.+..+++.|++++.....|.||||
T Consensus 400 ~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lh 479 (1143)
T KOG4177|consen 400 PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLH 479 (1143)
T ss_pred cccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchh
Confidence 4445555556666666666666666666666666666666666666666666 566666666666666666666666666
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCc--CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHH
Q 013471 233 EAIKCGHDGVTSLLVKEGASLNV--DDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLL 310 (442)
Q Consensus 233 ~A~~~~~~~iv~~Ll~~g~~~~~--~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~L 310 (442)
.|+..|+.++++.|++.++..+. ..+-+++|.|...+...+++.++++|++++.++..|.||||.||..|+.++|++|
T Consensus 480 laaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfL 559 (1143)
T KOG4177|consen 480 LAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFL 559 (1143)
T ss_pred hhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHh
Confidence 66666666666666665533322 2222445555555555555555555555555555555555555555555555555
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q 013471 311 LEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 351 (442)
Q Consensus 311 l~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~ 351 (442)
+++|+|++.+++.|+||||.|+..|+.+++.+|+++||++.
T Consensus 560 Le~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vn 600 (1143)
T KOG4177|consen 560 LEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVN 600 (1143)
T ss_pred hhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCC
Confidence 55555555555555555555555555555555555555433
No 40
>PHA02792 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.4e-26 Score=229.04 Aligned_cols=212 Identities=17% Similarity=0.091 Sum_probs=168.7
Q ss_pred HHHhhhcccccccccchhhhhHHHHHHHh-cCCHHHHHHHHHcCCCCC--------------------------------
Q 013471 142 RLKQLKSDITFHIGKHEAELALRVNSAAY-HGDLYQLKGLIRAGADPN-------------------------------- 188 (442)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~~~-------------------------------- 188 (442)
.+..+.-..+..++..+..+.+++++|+. .|+.+++++|+++|++++
T Consensus 86 Elvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (631)
T PHA02792 86 ELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYD 165 (631)
T ss_pred HHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccc
Confidence 33333344566666666677888898866 589999999999988632
Q ss_pred ----CCCCCCChHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHH------------
Q 013471 189 ----KTDYDGRSPLHLATSRG-------YEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG--HDGVT------------ 243 (442)
Q Consensus 189 ----~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~--~~~iv------------ 243 (442)
..|..|.||||+|+.++ +.++++.|+++|++++..|..|.||||+|+.+. ..|++
T Consensus 166 ~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 166 YTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred cccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccc
Confidence 23455889999999988 789999999999999999989999999998776 34444
Q ss_pred -------------------------------------------------------------------------------H
Q 013471 244 -------------------------------------------------------------------------------S 244 (442)
Q Consensus 244 -------------------------------------------------------------------------------~ 244 (442)
+
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence 4
Q ss_pred HHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC--CcHHHHHHHhChH---HHHHHHHHCCCCCCC
Q 013471 245 LLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDH--RTPLHVAASEGLY---LMAKLLLEAGASVFT 319 (442)
Q Consensus 245 ~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~Lh~A~~~g~~---~iv~~Ll~~ga~~~~ 319 (442)
+|+++|++.........++.|+..|+.+++++|+++|++++.+|.+| .||||.|+..+.. +++++|+++||++|.
T Consensus 326 ~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~ 405 (631)
T PHA02792 326 CMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINK 405 (631)
T ss_pred HHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccc
Confidence 44445554432223345788999999999999999999999998775 6999998776654 468999999999999
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 013471 320 KDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 320 ~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~ 353 (442)
+|..|+||||+|+..++.+++++|+++|++....
T Consensus 406 kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~k 439 (631)
T PHA02792 406 IDKHGRSILYYCIESHSVSLVEWLIDNGADINIT 439 (631)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 9999999999999999999999999999975543
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=7.6e-27 Score=243.65 Aligned_cols=201 Identities=32% Similarity=0.390 Sum_probs=191.4
Q ss_pred cccccccchhhhhHHHHHHHhcC-CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 013471 150 ITFHIGKHEAELALRVNSAAYHG-DLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGN 228 (442)
Q Consensus 150 ~~~~~~~~~~~~~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~ 228 (442)
.....+..+..|.|++|.|+..| ..+....+++.|.++|.....|.||||.|+..|+.++++.|++.++..+...+.+.
T Consensus 429 ~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l 508 (1143)
T KOG4177|consen 429 RGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGL 508 (1143)
T ss_pred cCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhcc
Confidence 44556667778899999999999 88999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC--hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHH
Q 013471 229 TPLLEAIKCGHDGVTSLLVKEGASLNVDDAG--SFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLM 306 (442)
Q Consensus 229 tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~--~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~i 306 (442)
+++|.|...+...+++.++++|++++...++ ||||.|+.+|+.++|++|+++|++++.++..|+||||.||..|+.++
T Consensus 509 ~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i 588 (1143)
T KOG4177|consen 509 TPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDI 588 (1143)
T ss_pred chhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHH
Confidence 9999999999999999999999999887654 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q 013471 307 AKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQ 350 (442)
Q Consensus 307 v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~ 350 (442)
+.+|+++|+++|..+.+|.|||++|+..|+.++++.|+..++..
T Consensus 589 ~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 589 AELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred HHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 99999999999999999999999999999999999999999883
No 42
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.94 E-value=7.9e-27 Score=196.70 Aligned_cols=189 Identities=26% Similarity=0.301 Sum_probs=175.4
Q ss_pred chhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 013471 157 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 236 (442)
Q Consensus 157 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 236 (442)
.+.+|...++.|+-+|+...+..++.+|+..|..+..+++|+.+++...+++.+..+.++ .+|..|+.|.|||.||+.
T Consensus 92 t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa 169 (296)
T KOG0502|consen 92 TDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAA 169 (296)
T ss_pred CCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHh
Confidence 344589999999999999999999999999999999999999999999999988887765 578899999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCC
Q 013471 237 CGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAG 314 (442)
Q Consensus 237 ~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~g 314 (442)
.|+.++|++|++.|++++.-. ..++|.+|++.|..++|++|+.++.|+|.-|.+|-|||-+|++.|+.+||+.|++.|
T Consensus 170 ~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sG 249 (296)
T KOG0502|consen 170 KGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSG 249 (296)
T ss_pred cCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcC
Confidence 999999999999999998844 458999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 013471 315 ASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 348 (442)
Q Consensus 315 a~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a 348 (442)
|+++..+..|+++++.|+..|+. +|+..++.-+
T Consensus 250 Ad~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~ 282 (296)
T KOG0502|consen 250 ADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHA 282 (296)
T ss_pred CCcccccccCCcHHHHHHHhhhH-HHHHHHHHHH
Confidence 99999999999999999999998 7777666554
No 43
>PHA02730 ankyrin-like protein; Provisional
Probab=99.94 E-value=9.3e-26 Score=227.19 Aligned_cols=210 Identities=20% Similarity=0.133 Sum_probs=176.5
Q ss_pred hHHHHhhhcccccccccchhhhhHHHHH--HHhcCCHHHHHHHHH--------------------------------cCC
Q 013471 140 NLRLKQLKSDITFHIGKHEAELALRVNS--AAYHGDLYQLKGLIR--------------------------------AGA 185 (442)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~--A~~~g~~~~v~~Ll~--------------------------------~g~ 185 (442)
.....++.-..+..++..+..|.||||+ |...|+.+++++|++ +|+
T Consensus 214 ~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (672)
T PHA02730 214 SKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNV 293 (672)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCc
Confidence 4455555566778889999999999995 556678999999999 677
Q ss_pred CCCC--------------------CCCCCCh---------------------HHHHHHHcC---CHHHHHHHHHcCCCCC
Q 013471 186 DPNK--------------------TDYDGRS---------------------PLHLATSRG---YEDITLFLIQKGVDIN 221 (442)
Q Consensus 186 ~~~~--------------------~~~~g~t---------------------~L~~A~~~g---~~~~v~~Ll~~ga~~~ 221 (442)
|... .+..|.+ .||.-...+ +.+++++|+++||+++
T Consensus 294 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN 373 (672)
T PHA02730 294 DMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMD 373 (672)
T ss_pred chHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCC
Confidence 7654 4555654 677777766 6899999999999999
Q ss_pred CCCCCCCcHHHHHHHcCC----HHHHHHHHHcCC--CCCcC--CCChHHHH---HHHcC---------CHHHHHHHHHCC
Q 013471 222 IKDKFGNTPLLEAIKCGH----DGVTSLLVKEGA--SLNVD--DAGSFLCT---AVARG---------DSDFLKRVLSNG 281 (442)
Q Consensus 222 ~~~~~g~tpL~~A~~~~~----~~iv~~Ll~~g~--~~~~~--~~~~~L~~---A~~~g---------~~~~v~~Ll~~g 281 (442)
.. ..|.||||+|+..++ .+++++|+++|+ +++.. .+.||||. |...+ ..+++++|+++|
T Consensus 374 ~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~G 452 (672)
T PHA02730 374 KT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYM 452 (672)
T ss_pred cC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcc
Confidence 85 799999999998875 899999999998 46654 35699984 33232 235799999999
Q ss_pred CCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHc--CCHHHHHHHHHcCCCc
Q 013471 282 VDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDR-WGNTPLDEGRMC--GNKNLIKLLEDAECTQ 350 (442)
Q Consensus 282 ~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~tpl~~A~~~--~~~~~v~~Ll~~~a~~ 350 (442)
++++.+|..|+||||+|+..++.+++++|+++||+++.++. .|.||+|.|+.. ++.+++++|+++|+..
T Consensus 453 ADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 453 DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999997 599999999974 7999999999999965
No 44
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=2.4e-26 Score=221.29 Aligned_cols=188 Identities=13% Similarity=0.047 Sum_probs=167.6
Q ss_pred HHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC------CCCCCCCcHHHHHHH--cCCHHHHHHHHH
Q 013471 177 LKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDIN------IKDKFGNTPLLEAIK--CGHDGVTSLLVK 248 (442)
Q Consensus 177 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~tpL~~A~~--~~~~~iv~~Ll~ 248 (442)
-++++++|+++|....+| +|+..+..+++++|+.+|++++ .++..++|+||.|+. .|+.+++++|++
T Consensus 65 ~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~ 139 (437)
T PHA02795 65 YDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVD 139 (437)
T ss_pred HHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHH
Confidence 468999999999887777 9999999999999999999998 788899999999999 899999999999
Q ss_pred cCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCC------CCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCC
Q 013471 249 EGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRD------YDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDR 322 (442)
Q Consensus 249 ~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~------~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~ 322 (442)
+|++++..++.||+|.|+..++.+++++|+++|++.+... ..|.|++|.|+..++.+++++|+++|+++|.+|.
T Consensus 140 ~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~ 219 (437)
T PHA02795 140 HGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDA 219 (437)
T ss_pred CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCC
Confidence 9999999888999999999999999999999998543222 3478999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccccccchhhcccCCCcceecCCCCCCcccc
Q 013471 323 WGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCSQGMIDKMHPRKCTVFPFHPWDEKVH 383 (442)
Q Consensus 323 ~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 383 (442)
.|+||||+|+..|+.+++++|+++|++.... ...+.+|+|.|+..+.
T Consensus 220 ~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~--------------d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 220 GGRTLLYRAIYAGYIDLVSWLLENGANVNAV--------------MSNGYTCLDVAVDRGS 266 (437)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc--------------CCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999965433 3455667777766553
No 45
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93 E-value=8.2e-25 Score=232.40 Aligned_cols=224 Identities=19% Similarity=0.133 Sum_probs=182.7
Q ss_pred hhhHHHHHHHhcCCHHHHHHHHHc--CCCCCCCCCCCChHHH-HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 013471 160 ELALRVNSAAYHGDLYQLKGLIRA--GADPNKTDYDGRSPLH-LATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 236 (442)
Q Consensus 160 ~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 236 (442)
.+..+++.|+..|+.+.++.+++. +.++|..|..|+|||| .|+.+++.+++++|+++|+ .+..|.||||.|+.
T Consensus 16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~ 91 (743)
T TIGR00870 16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISL 91 (743)
T ss_pred HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHh
Confidence 456789999999999999999999 8999999999999999 8999999999999999987 67889999999997
Q ss_pred cCC---HHHHHHHHHcCCCC------------CcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCC-------------
Q 013471 237 CGH---DGVTSLLVKEGASL------------NVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRD------------- 288 (442)
Q Consensus 237 ~~~---~~iv~~Ll~~g~~~------------~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~------------- 288 (442)
.+. ..++..+...+.+. ....+.||||.|+.+|+.+++++|+++|++++.++
T Consensus 92 ~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~ 171 (743)
T TIGR00870 92 EYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDS 171 (743)
T ss_pred ccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCc
Confidence 322 34455555544321 11346799999999999999999999999998653
Q ss_pred -CCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC---------CHHHHHHHHHcCCCccccccccc
Q 013471 289 -YDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG---------NKNLIKLLEDAECTQLSEFHYCS 358 (442)
Q Consensus 289 -~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~---------~~~~v~~Ll~~~a~~~~~~~~~~ 358 (442)
..|.||||.|+..|+.+++++|+++|+|++.+|..|+||||+|+..+ ...+.+++++.++.......
T Consensus 172 ~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~e--- 248 (743)
T TIGR00870 172 FYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKE--- 248 (743)
T ss_pred ccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHh---
Confidence 35899999999999999999999999999999999999999999987 34566778777765322110
Q ss_pred chhhcccCCCcceecCCCCCCccccccCceEEEccCcHHHHHHHH
Q 013471 359 QGMIDKMHPRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLA 403 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~lp~~~~~ll~~~ 403 (442)
-....+..+.+|+|.|+..++ ++.++.++.+.
T Consensus 249 ----l~~i~N~~g~TPL~~A~~~g~---------~~l~~lLL~~~ 280 (743)
T TIGR00870 249 ----LEVILNHQGLTPLKLAAKEGR---------IVLFRLKLAIK 280 (743)
T ss_pred ----hhhhcCCCCCCchhhhhhcCC---------ccHHHHHHHHH
Confidence 112345667789999998888 77788888764
No 46
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92 E-value=5.4e-24 Score=227.49 Aligned_cols=163 Identities=21% Similarity=0.204 Sum_probs=151.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHc
Q 013471 191 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVAR 268 (442)
Q Consensus 191 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~ 268 (442)
+..+.++||.||..|+.++++.|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+ +.||||.|+..
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~ 601 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA 601 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh
Confidence 4457899999999999999999999999999999999999999999999999999999999998864 67999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 013471 269 GDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAEC 348 (442)
Q Consensus 269 g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a 348 (442)
|+.+++++|++.++..+. ..|.++||.|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 602 g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GA 679 (823)
T PLN03192 602 KHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGA 679 (823)
T ss_pred CCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence 999999999998876543 467899999999999999999999999999999999999999999999999999999999
Q ss_pred Ccccccc
Q 013471 349 TQLSEFH 355 (442)
Q Consensus 349 ~~~~~~~ 355 (442)
+......
T Consensus 680 dv~~~~~ 686 (823)
T PLN03192 680 DVDKANT 686 (823)
T ss_pred CCCCCCC
Confidence 8765543
No 47
>PHA02792 ankyrin-like protein; Provisional
Probab=99.92 E-value=4.4e-24 Score=212.93 Aligned_cols=199 Identities=14% Similarity=0.082 Sum_probs=167.5
Q ss_pred cccccchhhhhHHHHHHHhcC-------CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHHcCC---C
Q 013471 152 FHIGKHEAELALRVNSAAYHG-------DLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG--YEDITLFLIQKGV---D 219 (442)
Q Consensus 152 ~~~~~~~~~~~t~L~~A~~~g-------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ga---~ 219 (442)
..++..+..|.||||+|+..+ +.++++.|+++|++++..|..|.||||+|+.+. +.|++++|++..- +
T Consensus 166 ~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 166 YTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred cccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccc
Confidence 344566777999999999999 899999999999999999999999999999998 7788887765311 0
Q ss_pred -------------------C------------------------------------------------------------
Q 013471 220 -------------------I------------------------------------------------------------ 220 (442)
Q Consensus 220 -------------------~------------------------------------------------------------ 220 (442)
+
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence 0
Q ss_pred -------CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC----ChHHHHHHHcCCH---HHHHHHHHCCCCCCC
Q 013471 221 -------NIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDA----GSFLCTAVARGDS---DFLKRVLSNGVDPSS 286 (442)
Q Consensus 221 -------~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~----~~~L~~A~~~g~~---~~v~~Ll~~g~~~~~ 286 (442)
+........+++.|+..|+.+++++|+++|++++..+. .||||.|+..... +++++|+++|+++|.
T Consensus 326 ~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~ 405 (631)
T PHA02792 326 CMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINK 405 (631)
T ss_pred HHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccc
Confidence 00001234568899999999999999999999988663 3899988777665 468999999999999
Q ss_pred CCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH--c--------CCHHHHHHHHHcCCCc
Q 013471 287 RDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRM--C--------GNKNLIKLLEDAECTQ 350 (442)
Q Consensus 287 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~--~--------~~~~~v~~Ll~~~a~~ 350 (442)
+|..|+||||+|+..++.+++++|+++|++++.+|..|+||+++|+. . ...++++.|+++|+..
T Consensus 406 kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 406 IDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999999999976 2 2356799999999765
No 48
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.92 E-value=3.4e-24 Score=227.64 Aligned_cols=195 Identities=21% Similarity=0.129 Sum_probs=161.1
Q ss_pred ccccccchhhhhHHHH-HHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC---CHHHHHHHHHcCCC------C
Q 013471 151 TFHIGKHEAELALRVN-SAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRG---YEDITLFLIQKGVD------I 220 (442)
Q Consensus 151 ~~~~~~~~~~~~t~L~-~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~ga~------~ 220 (442)
...++..+..|.|||| .|+..++.++++.|++.|+ .+..|.||||.|+..+ ...+++.+...+.+ .
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~ 117 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA 117 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence 4566677788999999 8889999999999999987 5678999999999732 23344444444422 1
Q ss_pred C----CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC----------------CCChHHHHHHHcCCHHHHHHHHHC
Q 013471 221 N----IKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD----------------DAGSFLCTAVARGDSDFLKRVLSN 280 (442)
Q Consensus 221 ~----~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~----------------~~~~~L~~A~~~g~~~~v~~Ll~~ 280 (442)
+ .....|.||||+|+..|+.+++++|+++|++++.. .+.+|||.|+..|+.+++++|+++
T Consensus 118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED 197 (743)
T ss_pred ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence 1 12357999999999999999999999999999864 356899999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhC---------hHHHHHHHHHCCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 013471 281 GVDPSSRDYDHRTPLHVAASEG---------LYLMAKLLLEAGASV-------FTKDRWGNTPLDEGRMCGNKNLIKLLE 344 (442)
Q Consensus 281 g~~~~~~~~~g~t~Lh~A~~~g---------~~~iv~~Ll~~ga~~-------~~~~~~g~tpl~~A~~~~~~~~v~~Ll 344 (442)
|++++.+|..|+||||+|+..+ ...+.+++++.++.. +..|.+|.||||+|+..|+.+++++|+
T Consensus 198 gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL 277 (743)
T TIGR00870 198 PADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKL 277 (743)
T ss_pred CcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHH
Confidence 9999999999999999999987 334666777665543 677999999999999999999999999
Q ss_pred HcCCC
Q 013471 345 DAECT 349 (442)
Q Consensus 345 ~~~a~ 349 (442)
+.+..
T Consensus 278 ~~~~~ 282 (743)
T TIGR00870 278 AIKYK 282 (743)
T ss_pred HHHHh
Confidence 96644
No 49
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91 E-value=2.2e-24 Score=194.84 Aligned_cols=161 Identities=29% Similarity=0.383 Sum_probs=147.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcC-----CHHHHHHHHHcCCCCCc---CC
Q 013471 187 PNKTDYDGRSPLHLATSRGYEDITLFLIQKG-VDINIKDKFGNTPLLEAIKCG-----HDGVTSLLVKEGASLNV---DD 257 (442)
Q Consensus 187 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~-----~~~iv~~Ll~~g~~~~~---~~ 257 (442)
+|..|.+|+|+||||+.++++++|+.||+.| ++++.+++.|+||+++|+... +.++|..|...| ++|. +.
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~ 339 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH 339 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence 5778999999999999999999999999985 799999999999999988653 477888888876 4554 45
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCC
Q 013471 258 AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEA-GASVFTKDRWGNTPLDEGRMCGN 336 (442)
Q Consensus 258 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~ 336 (442)
+.|+|++|+.+|+.++|+.||..|+|+|.+|.+|.|+|++||+.||.|++++||.. ++|+...|.+|-|+|.+|...||
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh 419 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH 419 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence 77999999999999999999999999999999999999999999999999999986 69999999999999999999999
Q ss_pred HHHHHHHHHcCC
Q 013471 337 KNLIKLLEDAEC 348 (442)
Q Consensus 337 ~~~v~~Ll~~~a 348 (442)
.++.-+|-.+..
T Consensus 420 ~eIa~mlYa~~n 431 (452)
T KOG0514|consen 420 REIAVMLYAHMN 431 (452)
T ss_pred hHHHHHHHHHHH
Confidence 999999877554
No 50
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.91 E-value=9.5e-24 Score=200.32 Aligned_cols=190 Identities=33% Similarity=0.434 Sum_probs=162.4
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 013471 164 RVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVT 243 (442)
Q Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv 243 (442)
.+..|+..|+.+-+..|+..|++++..+.+|.|+||.||.-.+.+||++|+++|+++|..|..|+||||.|+..|+..++
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~ 122 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIV 122 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCcCCC--ChH------------HHHHHHcCC--H------------HHHHHHHHCCCCCCCCCCCCCcHH
Q 013471 244 SLLVKEGASLNVDDA--GSF------------LCTAVARGD--S------------DFLKRVLSNGVDPSSRDYDHRTPL 295 (442)
Q Consensus 244 ~~Ll~~g~~~~~~~~--~~~------------L~~A~~~g~--~------------~~v~~Ll~~g~~~~~~~~~g~t~L 295 (442)
++|+++|+++-..+. +.| +..+..... + +-+...+..|...+..+..|.|+|
T Consensus 123 ~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~l 202 (527)
T KOG0505|consen 123 EYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATAL 202 (527)
T ss_pred HHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHH
Confidence 999999987654321 111 111111111 1 112233347888888888899999
Q ss_pred HHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 013471 296 HVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 296 h~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~ 353 (442)
|+|+.+|+.++.++|+++|.+++.+|.+||||||.|+..|+.+++++|+++|++....
T Consensus 203 HvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~ 260 (527)
T KOG0505|consen 203 HVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAK 260 (527)
T ss_pred HHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchh
Confidence 9999999999999999999999999999999999999999999999999999975443
No 51
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.90 E-value=3.4e-23 Score=178.51 Aligned_cols=142 Identities=19% Similarity=0.223 Sum_probs=94.2
Q ss_pred cCCCCCCCCCCCChHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHH---HHHHHHcCCCCCc
Q 013471 183 AGADPNKTDYDGRSPLHLATSRGYE----DITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGV---TSLLVKEGASLNV 255 (442)
Q Consensus 183 ~g~~~~~~~~~g~t~L~~A~~~g~~----~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~i---v~~Ll~~g~~~~~ 255 (442)
+|++++..+..+.++||.||+.|+. +++++|.+.|++++.+|..|.||||+|+..|+.+. +++|++.|++++.
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 4566666777778888888888887 55666777788888888888888888888777543 5666666666554
Q ss_pred CC---CChHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCC
Q 013471 256 DD---AGSFLCTAVARGDSDFLKRVLS-NGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWG 324 (442)
Q Consensus 256 ~~---~~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g 324 (442)
.+ +.||||+|+..|+.+++++|++ .|++++.++..|+||||+|+..++.+++++|+++|++++.++..|
T Consensus 89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 161 (166)
T PHA02743 89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIG 161 (166)
T ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCC
Confidence 32 3355555555555555555553 456666666666666666666666666666666666666665554
No 52
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.8e-23 Score=204.94 Aligned_cols=204 Identities=24% Similarity=0.254 Sum_probs=157.3
Q ss_pred cccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 013471 154 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE 233 (442)
Q Consensus 154 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~ 233 (442)
.+..+..|.|.||.|+.+|+.+++++|++..+-++..+..|.+|||+|++.|+.+++++|+.++..+|..+..|.||||.
T Consensus 42 ~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhl 121 (854)
T KOG0507|consen 42 HNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHL 121 (854)
T ss_pred ccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccch
Confidence 34445567788888888888888888888877777777888888888888888888888888887788888888888888
Q ss_pred HHHcCCHHHHHHHHHcCCCCCcCCC--ChHHHHHHHcCCHHHHHHHHHCCCC--------CCCCCCCCCcHHHHHHHhCh
Q 013471 234 AIKCGHDGVTSLLVKEGASLNVDDA--GSFLCTAVARGDSDFLKRVLSNGVD--------PSSRDYDHRTPLHVAASEGL 303 (442)
Q Consensus 234 A~~~~~~~iv~~Ll~~g~~~~~~~~--~~~L~~A~~~g~~~~v~~Ll~~g~~--------~~~~~~~g~t~Lh~A~~~g~ 303 (442)
|+..|+.+++.+|+.+|+++...+. .|++-.|++.|..++++.|++.... ...++..+-+|||.|+++|+
T Consensus 122 aaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh 201 (854)
T KOG0507|consen 122 AAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGH 201 (854)
T ss_pred hhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcch
Confidence 8888888888888888887766543 4788888888888888888875322 12345567778888888888
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccc
Q 013471 304 YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCS 358 (442)
Q Consensus 304 ~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~ 358 (442)
.++++.|+++|.|+|.....| |+||.|+.+|..++|+.|++.|.....+..++.
T Consensus 202 ~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~q 255 (854)
T KOG0507|consen 202 VECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQ 255 (854)
T ss_pred HHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccch
Confidence 888888888888888776665 788888888888888888887776555544443
No 53
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.89 E-value=1.6e-23 Score=176.83 Aligned_cols=189 Identities=22% Similarity=0.188 Sum_probs=173.6
Q ss_pred HHHHHhcCCHHHHHHHHHcCCC-CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 013471 165 VNSAAYHGDLYQLKGLIRAGAD-PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVT 243 (442)
Q Consensus 165 L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv 243 (442)
+-.|...|+.+.++.++.-.++ +...+.+|+.+++.|+-.|+...++.++.+|+..|..+..+++|+.+++...+.+.+
T Consensus 66 ~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~ 145 (296)
T KOG0502|consen 66 LTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVV 145 (296)
T ss_pred cchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHH
Confidence 5567788888888888776555 456677899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCC
Q 013471 244 SLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRW 323 (442)
Q Consensus 244 ~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 323 (442)
..+.++..+-....+-|||.||+++|+.++|++|++.|++++.......|+|.+|+..|..++|++|++++.|+|.-|.+
T Consensus 146 ~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwN 225 (296)
T KOG0502|consen 146 DLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWN 225 (296)
T ss_pred HHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccC
Confidence 99988877666667789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 013471 324 GNTPLDEGRMCGNKNLIKLLEDAECTQLSE 353 (442)
Q Consensus 324 g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~ 353 (442)
|.|||-+|++.+|.++++.|++.||+....
T Consensus 226 GgTpLlyAvrgnhvkcve~Ll~sGAd~t~e 255 (296)
T KOG0502|consen 226 GGTPLLYAVRGNHVKCVESLLNSGADVTQE 255 (296)
T ss_pred CCceeeeeecCChHHHHHHHHhcCCCcccc
Confidence 999999999999999999999999976544
No 54
>PHA02741 hypothetical protein; Provisional
Probab=99.89 E-value=1.7e-22 Score=174.92 Aligned_cols=135 Identities=17% Similarity=0.234 Sum_probs=114.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChH
Q 013471 188 NKTDYDGRSPLHLATSRGYEDITLFLIQ------KGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSF 261 (442)
Q Consensus 188 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~ 261 (442)
+.++..|.||||+|++.|+.++++.|+. .|++++.+|..|.||||+|+..|+.+++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~------------------ 76 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLA------------------ 76 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHH------------------
Confidence 4567789999999999999999998854 3688888899999999999888875332
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHhChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 013471 262 LCTAVARGDSDFLKRVLSNGVDPSSRDY-DHRTPLHVAASEGLYLMAKLLLE-AGASVFTKDRWGNTPLDEGRMCGNKNL 339 (442)
Q Consensus 262 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~Lh~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~ 339 (442)
.+++++|++.|++++.++. .|+||||+|+..++.+++++|++ .|++++.+|..|+||||+|+..++.++
T Consensus 77 ---------~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~i 147 (169)
T PHA02741 77 ---------AEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAM 147 (169)
T ss_pred ---------HHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHH
Confidence 2455666677777788875 89999999999999999999998 599999999999999999999999999
Q ss_pred HHHHHHcCCC
Q 013471 340 IKLLEDAECT 349 (442)
Q Consensus 340 v~~Ll~~~a~ 349 (442)
+++|++.++.
T Consensus 148 v~~L~~~~~~ 157 (169)
T PHA02741 148 MQILREIVAT 157 (169)
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 55
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.88 E-value=1e-21 Score=182.36 Aligned_cols=152 Identities=23% Similarity=0.229 Sum_probs=122.2
Q ss_pred CCCCCCCh-HHHHHHHcCCHHHHHHHHHcCCCCCCCC----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC---CCCh
Q 013471 189 KTDYDGRS-PLHLATSRGYEDITLFLIQKGVDINIKD----KFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD---DAGS 260 (442)
Q Consensus 189 ~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~~----~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~---~~~~ 260 (442)
.+|..|.| +||.|+..|+.+++++|+++|++++.++ ..|.||||+|+..++.+++++|+++|++++.. .+.|
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~T 106 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKIT 106 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCC
Confidence 34555655 5566666678888888888888888763 57888888888888888888888888888863 2568
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 013471 261 FLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLI 340 (442)
Q Consensus 261 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v 340 (442)
|||.|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++..+.. .. .+..+.+|.+++ ++.+++
T Consensus 107 pLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~---~n~ei~ 178 (300)
T PHA02884 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD--NE---ISNFYKHPKKIL---INFDIL 178 (300)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC--Cc---ccccccChhhhh---ccHHHH
Confidence 8888888888899999999999999999999999999999999888766653 22 356678888875 478999
Q ss_pred HHHHHcCC
Q 013471 341 KLLEDAEC 348 (442)
Q Consensus 341 ~~Ll~~~a 348 (442)
++|++++.
T Consensus 179 ~~Lish~v 186 (300)
T PHA02884 179 KILVSHFI 186 (300)
T ss_pred HHHHHHHH
Confidence 99999887
No 56
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.88 E-value=1.2e-22 Score=192.95 Aligned_cols=183 Identities=30% Similarity=0.371 Sum_probs=157.5
Q ss_pred cccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 013471 152 FHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPL 231 (442)
Q Consensus 152 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 231 (442)
...+..+..|.|+||.|+...+.+||++|+++|+++|..|..|+||||.|+..|+..++++|+++|+++...+.+|..|+
T Consensus 64 a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~ 143 (527)
T KOG0505|consen 64 ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPY 143 (527)
T ss_pred CCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcc
Confidence 33466777899999999999999999999999999999999999999999999999999999999999888887777765
Q ss_pred HHHHHcCCHH--------------------------HHHHHHHcCCCCCcC--CCChHHHHHHHcCCHHHHHHHHHCCCC
Q 013471 232 LEAIKCGHDG--------------------------VTSLLVKEGASLNVD--DAGSFLCTAVARGDSDFLKRVLSNGVD 283 (442)
Q Consensus 232 ~~A~~~~~~~--------------------------iv~~Ll~~g~~~~~~--~~~~~L~~A~~~g~~~~v~~Ll~~g~~ 283 (442)
..+...-..+ =++..+..|...+.. .+.|.||.|+.+|..++.++|++.|.+
T Consensus 144 dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~ 223 (527)
T KOG0505|consen 144 DLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYS 223 (527)
T ss_pred ccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccC
Confidence 5443221111 123333466655543 366999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Q 013471 284 PSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMC 334 (442)
Q Consensus 284 ~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 334 (442)
++.+|.+||||||.|+..|..+++++|+++|++++..+..|.||+++|...
T Consensus 224 ~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 224 VNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred cccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence 999999999999999999999999999999999999999999999998764
No 57
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=1.6e-21 Score=168.09 Aligned_cols=139 Identities=15% Similarity=0.165 Sum_probs=124.6
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHHHHcCCCCCcC--CCChHHHHHHHcCCHHH---HHHHHHCCCCCCC
Q 013471 216 KGVDINIKDKFGNTPLLEAIKCGHD----GVTSLLVKEGASLNVD--DAGSFLCTAVARGDSDF---LKRVLSNGVDPSS 286 (442)
Q Consensus 216 ~ga~~~~~~~~g~tpL~~A~~~~~~----~iv~~Ll~~g~~~~~~--~~~~~L~~A~~~g~~~~---v~~Ll~~g~~~~~ 286 (442)
+|++++..+..+.+++|.|++.|+. +++++|.+.|..++.. .++||||+|+..|+.+. +++|+++|++++.
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 5778888888999999999999997 6677888888887764 46799999999988654 8999999999999
Q ss_pred CC-CCCCcHHHHHHHhChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 013471 287 RD-YDHRTPLHVAASEGLYLMAKLLLE-AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEF 354 (442)
Q Consensus 287 ~~-~~g~t~Lh~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~ 354 (442)
++ ..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++.+++++|+++|++...+.
T Consensus 89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~ 158 (166)
T PHA02743 89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPL 158 (166)
T ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence 98 589999999999999999999995 899999999999999999999999999999999999766553
No 58
>PF11834 DUF3354: Domain of unknown function (DUF3354); InterPro: IPR021789 Potassium channels take part in important processes of higher plants, including opening and closing of stomatal pores and leaf movement. Inward rectifying potassium (K(+)in) channels play an important role in turgor regulation and ion uptake in higher plants. All of them comprise, from their N-terminal to their C-terminal ends: a short hydrophilic region, a hydrophobic region structurally analogous and partially homologous to the transmembrane domain of voltage-gated animal channels from the Shaker superfamily, a putative cyclic nucleotide-binding domain, and a conserved C-terminal KHA domain. Between these last two regions, some of them (AKT1, AKT2 and SKT1) contain an ankyrin-repeat domain with six repeats homologous to those of human erythrocyte ankyrin. This entry represents the KHA domain which is unique to plant K(+)in channels. The KHA domain contains two high-homology blocks enriched for hydrophobic and acidic residues, respectively. The KHA domain is essential for interaction of plant K(+)in channels. The KHA domain mediates tetramerization and/or stabilisation of the heteromers [, , ].
Probab=99.87 E-value=3.4e-22 Score=140.43 Aligned_cols=69 Identities=45% Similarity=0.937 Sum_probs=63.9
Q ss_pred CCcceecCCCCCCccccccCceEEEccCcHHHHHHHHhhhcCCCCCCcccccCCceeeEeeeeecCCeEEEe
Q 013471 367 PRKCTVFPFHPWDEKVHRRHGIVLWVPHNIEELIKLAVDKLDFPDGHSILSEDGGKILDVDMINDGQKLYLI 438 (442)
Q Consensus 367 ~~~~~~~~~h~~~~~~~~~~~~~~~lp~~~~~ll~~~~~k~~~~~~~~~~~~~~~~i~~i~~ird~d~~~~~ 438 (442)
+.|+++++.|++.. +. ..|+++++|+|++||+++|++|||+. +++++++||||||||+|||||||||++
T Consensus 1 ~~RVtI~~~~~~~~-~~-~~GKvi~lP~SleeLl~ia~~kfg~~-~~~v~~~dgaeIdDI~~IRDgD~L~~~ 69 (69)
T PF11834_consen 1 PKRVTIFPNHPPEK-GR-RAGKVIWLPDSLEELLKIASEKFGFS-ATKVLNEDGAEIDDIDVIRDGDHLYLV 69 (69)
T ss_pred CcEEEEecCCCCcc-cC-cCCEEEEcCccHHHHHHHHHHHhCCC-ceEEEcCCCCEEeEEEEEEcCCEEEEC
Confidence 46899999999887 33 56999999999999999999999996 899999999999999999999999985
No 59
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.87 E-value=4.4e-22 Score=195.31 Aligned_cols=196 Identities=24% Similarity=0.291 Sum_probs=171.1
Q ss_pred ccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 013471 149 DITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGN 228 (442)
Q Consensus 149 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~ 228 (442)
+....+.-.+..|.+|||+|+..|+.++++.++.++..+|..+..|.||||.|+++||.+++.+|+++|+|+-.++..+.
T Consensus 70 e~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~ 149 (854)
T KOG0507|consen 70 DYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKE 149 (854)
T ss_pred cchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccc
Confidence 44444555568899999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCc----------CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 013471 229 TPLLEAIKCGHDGVTSLLVKEGASLNV----------DDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVA 298 (442)
Q Consensus 229 tpL~~A~~~~~~~iv~~Ll~~g~~~~~----------~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A 298 (442)
|+|.+|++.|+.++++.|++....... ....+|+|.|+++|+.++++.|++.|.++|.....| |+||.|
T Consensus 150 t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talhea 228 (854)
T KOG0507|consen 150 TVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEA 228 (854)
T ss_pred cHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhH
Confidence 999999999999999999987332211 123368999999999999999999999999988776 899999
Q ss_pred HHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHH
Q 013471 299 ASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG---NKNLIKLLED 345 (442)
Q Consensus 299 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~---~~~~v~~Ll~ 345 (442)
+..|..++|++|++.|.+...+|.+|+|+|++-...- ..+++-++..
T Consensus 229 alcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~ 278 (854)
T KOG0507|consen 229 ALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKN 278 (854)
T ss_pred hhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence 9999999999999999999999999999998766543 3455544443
No 60
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.87 E-value=9.8e-22 Score=167.74 Aligned_cols=133 Identities=19% Similarity=0.193 Sum_probs=96.3
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC
Q 013471 187 PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVD-------INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAG 259 (442)
Q Consensus 187 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-------~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~ 259 (442)
++.+|..|.||||+|++.|+. +.++...+.. ++.+|..|.||||+|+..|+.+.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~---------------- 71 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQ---------------- 71 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHH----------------
Confidence 345567788888888888873 3343333221 223466677777777766654321
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCH
Q 013471 260 SFLCTAVARGDSDFLKRVLSNGVDPSSRD-YDHRTPLHVAASEGLYLMAKLLLE-AGASVFTKDRWGNTPLDEGRMCGNK 337 (442)
Q Consensus 260 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~ 337 (442)
+++++|++.|++++.++ ..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.
T Consensus 72 ------------e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~ 139 (154)
T PHA02736 72 ------------EKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDA 139 (154)
T ss_pred ------------HHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCH
Confidence 34556666677777777 478899999998888898998887 4888888888899999999988888
Q ss_pred HHHHHHHHcCCC
Q 013471 338 NLIKLLEDAECT 349 (442)
Q Consensus 338 ~~v~~Ll~~~a~ 349 (442)
+++++|+++|++
T Consensus 140 ~i~~~Ll~~ga~ 151 (154)
T PHA02736 140 KMMNILRAKGAQ 151 (154)
T ss_pred HHHHHHHHcCCC
Confidence 999988888875
No 61
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87 E-value=4.7e-22 Score=179.83 Aligned_cols=161 Identities=24% Similarity=0.357 Sum_probs=144.9
Q ss_pred cccccchhhhhHHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHcC-----CHHHHHHHHHcCCCCCCC-C
Q 013471 152 FHIGKHEAELALRVNSAAYHGDLYQLKGLIRAG-ADPNKTDYDGRSPLHLATSRG-----YEDITLFLIQKGVDINIK-D 224 (442)
Q Consensus 152 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g-----~~~~v~~Ll~~ga~~~~~-~ 224 (442)
+.+|-.+.+|+|+||||+.++|.++|+.||+.| ++++.+|..|+||+++|+... +.++|..|...| |+|.+ .
T Consensus 259 yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAs 337 (452)
T KOG0514|consen 259 YVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKAS 337 (452)
T ss_pred HHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhh
Confidence 445677888999999999999999999999998 679999999999999998643 678899998876 66655 4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHh
Q 013471 225 KFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSN-GVDPSSRDYDHRTPLHVAASE 301 (442)
Q Consensus 225 ~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~Lh~A~~~ 301 (442)
..|+|+|++|+..|+.++++.||..|+|+|.++ |.|+|+.||.+|+.+++++||.. ++|....|.+|.|+|.+|...
T Consensus 338 Q~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 338 QHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEA 417 (452)
T ss_pred hhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence 679999999999999999999999999999976 55999999999999999999976 899999999999999999999
Q ss_pred ChHHHHHHHHHC
Q 013471 302 GLYLMAKLLLEA 313 (442)
Q Consensus 302 g~~~iv~~Ll~~ 313 (442)
|+.||.-+|-.+
T Consensus 418 gh~eIa~mlYa~ 429 (452)
T KOG0514|consen 418 GHREIAVMLYAH 429 (452)
T ss_pred CchHHHHHHHHH
Confidence 999998888754
No 62
>PHA02741 hypothetical protein; Provisional
Probab=99.86 E-value=4.8e-21 Score=165.86 Aligned_cols=133 Identities=25% Similarity=0.279 Sum_probs=110.8
Q ss_pred cccchhhhhHHHHHHHhcCCHHHHHHHHH------cCCCCCCCCCCCChHHHHHHHcCC----HHHHHHHHHcCCCCCCC
Q 013471 154 IGKHEAELALRVNSAAYHGDLYQLKGLIR------AGADPNKTDYDGRSPLHLATSRGY----EDITLFLIQKGVDINIK 223 (442)
Q Consensus 154 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~ga~~~~~ 223 (442)
++..+..|.|+||+|+..|+.++++.|+. .|++++.+|..|.||||+|+..|+ .+++++|+++|++++.+
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence 34556678999999999999999999864 368899999999999999999999 58899999999999998
Q ss_pred CC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhC
Q 013471 224 DK-FGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEG 302 (442)
Q Consensus 224 ~~-~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g 302 (442)
+. .|.||||+|+..++.+++++|+.. .|++++.+|..|+||||+|+..+
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~------------------------------~g~~~~~~n~~g~tpL~~A~~~~ 143 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQ------------------------------PGIDLHFCNADNKSPFELAIDNE 143 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhC------------------------------CCCCCCcCCCCCCCHHHHHHHCC
Confidence 85 899999999888888777777753 13445566778888888888888
Q ss_pred hHHHHHHHHHCCCC
Q 013471 303 LYLMAKLLLEAGAS 316 (442)
Q Consensus 303 ~~~iv~~Ll~~ga~ 316 (442)
+.+++++|++.++.
T Consensus 144 ~~~iv~~L~~~~~~ 157 (169)
T PHA02741 144 DVAMMQILREIVAT 157 (169)
T ss_pred CHHHHHHHHHHHHH
Confidence 88888888887654
No 63
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.85 E-value=1.4e-20 Score=174.67 Aligned_cols=146 Identities=18% Similarity=0.166 Sum_probs=128.5
Q ss_pred hHHHHHHHhcCCHHHHHHHHHcCCCCCCCC----CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHH
Q 013471 162 ALRVNSAAYHGDLYQLKGLIRAGADPNKTD----YDGRSPLHLATSRGYEDITLFLIQKGVDINIK-DKFGNTPLLEAIK 236 (442)
Q Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~----~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-~~~g~tpL~~A~~ 236 (442)
.++||.|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++||+++.+ +..|.||||.|+.
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~ 113 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVL 113 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHH
Confidence 457888888999999999999999999874 58999999999999999999999999999986 4689999999999
Q ss_pred cCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCC
Q 013471 237 CGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAG 314 (442)
Q Consensus 237 ~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~g 314 (442)
.++.+++++|+++|++++..+ +.||||.|+..++.+++..+. |. ..+..+.+|++++ ++.+++++|++++
T Consensus 114 ~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~---~n~ei~~~Lish~ 185 (300)
T PHA02884 114 HGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DN---EISNFYKHPKKIL---INFDILKILVSHF 185 (300)
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CC---cccccccChhhhh---ccHHHHHHHHHHH
Confidence 999999999999999998754 669999999999998876654 32 2456678888875 4789999999998
Q ss_pred C
Q 013471 315 A 315 (442)
Q Consensus 315 a 315 (442)
+
T Consensus 186 v 186 (300)
T PHA02884 186 I 186 (300)
T ss_pred H
Confidence 7
No 64
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.84 E-value=1.6e-20 Score=186.87 Aligned_cols=237 Identities=22% Similarity=0.261 Sum_probs=184.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHcC---------CCCCCCCCCCChHHHHHHHc---CCHHHHHHHHHcCCC----CC-CCCC
Q 013471 163 LRVNSAAYHGDLYQLKGLIRAG---------ADPNKTDYDGRSPLHLATSR---GYEDITLFLIQKGVD----IN-IKDK 225 (442)
Q Consensus 163 t~L~~A~~~g~~~~v~~Ll~~g---------~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~----~~-~~~~ 225 (442)
.++..|...+.++.+..++..+ .+++.+...|.|.||.|..+ ++-++++.|++.-.. +- ....
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY 182 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY 182 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence 4677888888888888877655 45677778899999999874 455889999885221 11 2236
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC-------------------------CChHHHHHHHcCCHHHHHHHHHC
Q 013471 226 FGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD-------------------------AGSFLCTAVARGDSDFLKRVLSN 280 (442)
Q Consensus 226 ~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~-------------------------~~~~L~~A~~~g~~~~v~~Ll~~ 280 (442)
.|.||||.|+.+.+.++|++|++.|+|++.+. |+.||.+|+..++.+++++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 79999999999999999999999999887621 33599999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccc
Q 013471 281 GVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS--VFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQLSEFHYCS 358 (442)
Q Consensus 281 g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~--~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~~~~~~~~ 358 (442)
|||++++|.+|+|.||..+..-..++-.+++++|++ ...+|+.|-|||.+|+.-|+.++.+.+++......
T Consensus 263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~------- 335 (782)
T KOG3676|consen 263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTD------- 335 (782)
T ss_pred CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccc-------
Confidence 999999999999999999999999999999999999 89999999999999999999999999999752221
Q ss_pred chhhcccCCCcceecCCCCCCcccc-----------ccCceEEEccCcHHHHHHHHhhhcCCC
Q 013471 359 QGMIDKMHPRKCTVFPFHPWDEKVH-----------RRHGIVLWVPHNIEELIKLAVDKLDFP 410 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~h~~~~~~~-----------~~~~~~~~lp~~~~~ll~~~~~k~~~~ 410 (442)
-...|-.++.+|+..-+.-+. .....+.++.+-+++|++.-.++||..
T Consensus 336 ----W~YGpvtsslYpL~~iDT~~n~~SvLeivvyg~~~eHl~Ll~~~i~~LL~~KW~~f~k~ 394 (782)
T KOG3676|consen 336 ----WAYGPVTSSLYPLNSIDTIGNENSVLEIVVYGIKNEHLELLDGPIEELLEDKWKAFGKK 394 (782)
T ss_pred ----eeecccccccccchhcccccchhhhhhhhhcCCcHHHHHHHhHHHHHHHHHHHHHHhHH
Confidence 112223333333332221100 122334456778999999988888873
No 65
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.83 E-value=1.3e-20 Score=160.72 Aligned_cols=132 Identities=24% Similarity=0.290 Sum_probs=103.9
Q ss_pred ccchhhhhHHHHHHHhcCCHHHHHHHHHcCC--C-----CCCCCCCCChHHHHHHHcCCH---HHHHHHHHcCCCCCCCC
Q 013471 155 GKHEAELALRVNSAAYHGDLYQLKGLIRAGA--D-----PNKTDYDGRSPLHLATSRGYE---DITLFLIQKGVDINIKD 224 (442)
Q Consensus 155 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~-----~~~~~~~g~t~L~~A~~~g~~---~~v~~Ll~~ga~~~~~~ 224 (442)
+..+..|.||||+|+..|+. +..+...+. + ++.+|..|.||||+|+..|+. +++++|+++|++++.++
T Consensus 11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~ 88 (154)
T PHA02736 11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE 88 (154)
T ss_pred HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence 44566799999999999984 333333322 2 234688999999999999987 46889999999999998
Q ss_pred -CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhCh
Q 013471 225 -KFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGL 303 (442)
Q Consensus 225 -~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~ 303 (442)
..|.||||+|+..|+.+++++|+.. .|++++.++..|+||||+|+..|+
T Consensus 89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~------------------------------~g~d~n~~~~~g~tpL~~A~~~~~ 138 (154)
T PHA02736 89 RVFGNTPLHIAVYTQNYELATWLCNQ------------------------------PGVNMEILNYAFKTPYYVACERHD 138 (154)
T ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhC------------------------------CCCCCccccCCCCCHHHHHHHcCC
Confidence 4899999999888887777777653 245566777788999999999999
Q ss_pred HHHHHHHHHCCCCCC
Q 013471 304 YLMAKLLLEAGASVF 318 (442)
Q Consensus 304 ~~iv~~Ll~~ga~~~ 318 (442)
.+++++|+++|++.+
T Consensus 139 ~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 139 AKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999888764
No 66
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83 E-value=6.2e-20 Score=149.60 Aligned_cols=142 Identities=30% Similarity=0.287 Sum_probs=116.7
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCC-CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 013471 164 RVNSAAYHGDLYQLKGLIRAGAD-PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGV 242 (442)
Q Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~i 242 (442)
.+.+|+..+.+..|+.||+..++ +|.+|.+|.||||.|+.+|+.++|+.|+..||+++.+...|+||||.||..++.++
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence 47789999999999999998877 89999999999999999999999999999999999999999999999888888777
Q ss_pred HHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhCh-HHHHHHHH-HCCCCCCCC
Q 013471 243 TSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGL-YLMAKLLL-EAGASVFTK 320 (442)
Q Consensus 243 v~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~-~~iv~~Ll-~~ga~~~~~ 320 (442)
+..|+++|++++ +.....+||||+||...+ ...+++|+ ..+.++..+
T Consensus 146 a~~LLqhgaDVn-------------------------------A~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~ 194 (228)
T KOG0512|consen 146 AGRLLQHGADVN-------------------------------AQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLK 194 (228)
T ss_pred HHHHHhccCccc-------------------------------ccccccchhhHHhhcccchHHHHHHHhhccccChhhh
Confidence 777776666555 445556778888776543 44555555 356788888
Q ss_pred CCCCCCHHHHHHHcCC
Q 013471 321 DRWGNTPLDEGRMCGN 336 (442)
Q Consensus 321 ~~~g~tpl~~A~~~~~ 336 (442)
++.+.||+++|.+-+-
T Consensus 195 nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 195 NNLEETAFDIARRTSM 210 (228)
T ss_pred cCccchHHHHHHHhhh
Confidence 8888888888877653
No 67
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.82 E-value=1.7e-19 Score=147.01 Aligned_cols=121 Identities=25% Similarity=0.261 Sum_probs=99.9
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHH
Q 013471 197 PLHLATSRGYEDITLFLIQKGVD-INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLK 275 (442)
Q Consensus 197 ~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~ 275 (442)
.+.+|+..+....|+.||+..++ +|.+|.+|+||||-|+.+|+.+|++.|+..
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~-------------------------- 119 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLS-------------------------- 119 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHc--------------------------
Confidence 46778888888888888887665 788888888888888777776666666554
Q ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCC
Q 013471 276 RVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK-NLIKLLEDAEC 348 (442)
Q Consensus 276 ~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~-~~v~~Ll~~~a 348 (442)
|++++++...||||||-||..++.+++.+|+++|+|+|+......||||+|+.+.+. ..+++|+....
T Consensus 120 -----gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry 188 (228)
T KOG0512|consen 120 -----GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRY 188 (228)
T ss_pred -----cCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccc
Confidence 556667888999999999999999999999999999999999999999999998775 55677765443
No 68
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=3e-19 Score=156.92 Aligned_cols=136 Identities=29% Similarity=0.374 Sum_probs=95.9
Q ss_pred CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHH
Q 013471 185 ADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCT 264 (442)
Q Consensus 185 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~ 264 (442)
.|.|.-|..|.+|||+||+.|+..+|+.|+.+|+.+|..+.... ||||+
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgdd-------------------------------tplhl 73 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDD-------------------------------TPLHL 73 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCC-------------------------------cchhh
Confidence 34455555555555555555555555555555555555444444 45555
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 013471 265 AVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLE 344 (442)
Q Consensus 265 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll 344 (442)
|+..|+.++|+.|++..+|+|+.+..|+|||||||-.|+..+.+-|+..||.++..|+.|.||++.|.-.-...+.+.-.
T Consensus 74 aaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~ae 153 (448)
T KOG0195|consen 74 AAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAE 153 (448)
T ss_pred hhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHH
Confidence 55556666666666777788889999999999999999999999999999999999999999999886554444555555
Q ss_pred HcCCCcc
Q 013471 345 DAECTQL 351 (442)
Q Consensus 345 ~~~a~~~ 351 (442)
++|.+..
T Consensus 154 k~gq~~n 160 (448)
T KOG0195|consen 154 KHGQSPN 160 (448)
T ss_pred HhCCCCC
Confidence 6665543
No 69
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.79 E-value=5.8e-20 Score=185.68 Aligned_cols=227 Identities=25% Similarity=0.245 Sum_probs=202.2
Q ss_pred cCcccceeEEEeeccccccchHHHHhhhcccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCC-CCCCChHH
Q 013471 120 QGNVVDQLYFVCHGVLGKESNLRLKQLKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKT-DYDGRSPL 198 (442)
Q Consensus 120 ~~~~~~~ly~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~L 198 (442)
+.+..+.+.+.|.|...+...+.+ .....+...+..|.+||..|+..|+..+|+.|+++.++++.+ |..+.|+|
T Consensus 754 e~n~~t~LT~acaggh~e~vellv-----~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~l 828 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLV-----VRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTML 828 (2131)
T ss_pred CccccccccccccCccHHHHHHHH-----HhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceE
Confidence 344456677788877654444433 344667788888999999999999999999999999998765 67899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC----hHHHHHHHcCCHHHH
Q 013471 199 HLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAG----SFLCTAVARGDSDFL 274 (442)
Q Consensus 199 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~----~~L~~A~~~g~~~~v 274 (442)
.+||..|+.++|++||..|++-..++-..+|||.+|...|..++++.|+.+|+.++.+.+. .||+.|..+|+.+.+
T Consensus 829 Slacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at 908 (2131)
T KOG4369|consen 829 SLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAAT 908 (2131)
T ss_pred EEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHH
Confidence 9999999999999999999999999999999999999999999999999999999986643 799999999999999
Q ss_pred HHHHHCCCCCCCCC-CCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q 013471 275 KRVLSNGVDPSSRD-YDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECTQL 351 (442)
Q Consensus 275 ~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~~~ 351 (442)
+.|++.|.++|.+- .+.+|+|-+|+-.|+.++|.+||.+.+++..+-+.|.|||+-++..|..++=++|+..||+..
T Consensus 909 ~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~n 986 (2131)
T KOG4369|consen 909 LSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTN 986 (2131)
T ss_pred HHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccc
Confidence 99999999999764 567899999999999999999999999999999999999999999999999999999999764
No 70
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1.9e-19 Score=171.72 Aligned_cols=73 Identities=33% Similarity=0.562 Sum_probs=67.0
Q ss_pred CEeeeccCC--CCChhHHHHHHHHHHHHHHhhhceeeEEeCCceEEEechHHHHHHHHhhhhhhhhhhcCcHHHHH
Q 013471 1 MEFAFFRGL--PENLSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPWDVIY 74 (442)
Q Consensus 1 ~~~~f~~~~--~~~~~~~~~~~~~~~~~d~~~~f~~~~~~~~~~~~v~~~~~i~~~y~~~~~~~d~~~~~p~~~~~ 74 (442)
|-++|-... ...|.++|.++|++|++||++||.|.|+-|+++ +|.||+.|.++|+++||++|+++++|++++.
T Consensus 237 yNvaFKnk~~~~vs~lvvDSiVDVIF~vDIvLNFHTTFVGPgGE-VvsdPkvIRmNYlKsWFvIDLLSCLPYDi~n 311 (971)
T KOG0501|consen 237 YNVAFKNKQRNNVSWLVVDSIVDVIFFVDIVLNFHTTFVGPGGE-VVSDPKVIRMNYLKSWFVIDLLSCLPYDIFN 311 (971)
T ss_pred eeeeecccccCceeEEEecchhhhhhhhhhhhhcceeeecCCCc-eecChhHHhHHHHHHHHHHHHHhcccHHHHH
Confidence 457886654 335999999999999999999999999999998 9999999999999999999999999999997
No 71
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.77 E-value=2.8e-18 Score=132.02 Aligned_cols=89 Identities=39% Similarity=0.565 Sum_probs=81.4
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 013471 165 VNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTS 244 (442)
Q Consensus 165 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~ 244 (442)
||.|++.|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 7999999999999999999988876 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCcCC
Q 013471 245 LLVKEGASLNVDD 257 (442)
Q Consensus 245 ~Ll~~g~~~~~~~ 257 (442)
+|+++|++++.++
T Consensus 77 ~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEHGADVNIRN 89 (89)
T ss_dssp HHHHTTT-TTSS-
T ss_pred HHHHcCCCCCCcC
Confidence 9999999988653
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.77 E-value=4.4e-18 Score=130.91 Aligned_cols=89 Identities=35% Similarity=0.490 Sum_probs=55.1
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHH
Q 013471 231 LLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLL 310 (442)
Q Consensus 231 L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~L 310 (442)
||+|++.|+.+++++|++.+.+++. +.+|||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~--~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 78 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL--GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLL 78 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS--SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC--CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4555555555555555555555444 44555566666666666666666666666677777777777777777777777
Q ss_pred HHCCCCCCCCC
Q 013471 311 LEAGASVFTKD 321 (442)
Q Consensus 311 l~~ga~~~~~~ 321 (442)
+++|++++.+|
T Consensus 79 l~~g~~~~~~n 89 (89)
T PF12796_consen 79 LEHGADVNIRN 89 (89)
T ss_dssp HHTTT-TTSS-
T ss_pred HHcCCCCCCcC
Confidence 77777776654
No 73
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.77 E-value=3.6e-19 Score=180.09 Aligned_cols=194 Identities=24% Similarity=0.281 Sum_probs=177.4
Q ss_pred chhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHH
Q 013471 157 HEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINI-KDKFGNTPLLEAI 235 (442)
Q Consensus 157 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~ 235 (442)
.+....|+|-.||..|+.|.+++|+.+|+++..+|+.|.+||.+|+..||..+|+.|+.+.++++. .|+.+.|+|.+||
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac 832 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC 832 (2131)
T ss_pred cCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence 344567899999999999999999999999999999999999999999999999999999999985 5788999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCcHHHHHHHhChHHHHHHHH
Q 013471 236 KCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDPSSRD--YDHRTPLHVAASEGLYLMAKLLL 311 (442)
Q Consensus 236 ~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~Lh~A~~~g~~~iv~~Ll 311 (442)
..|+.++|++|+.+|++-..++ ..|||.+|...|..++++.|+.+|+.+|.+. ..|-.||++|..+|+.+.++.|+
T Consensus 833 sggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll 912 (2131)
T KOG4369|consen 833 SGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLL 912 (2131)
T ss_pred CCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHh
Confidence 9999999999999999876654 4599999999999999999999998888764 67899999999999999999999
Q ss_pred HCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q 013471 312 EAGASVFTKDR-WGNTPLDEGRMCGNKNLIKLLEDAECTQ 350 (442)
Q Consensus 312 ~~ga~~~~~~~-~g~tpl~~A~~~~~~~~v~~Ll~~~a~~ 350 (442)
+.|.|+|..-. +-+|+|-+|+..|..+++.+|+.+.+..
T Consensus 913 ~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anv 952 (2131)
T KOG4369|consen 913 QPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANV 952 (2131)
T ss_pred cccchhccccccccccceeeccccCcchHHHHHHHHhhhh
Confidence 99999998654 6789999999999999999999987743
No 74
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.72 E-value=2.3e-17 Score=145.19 Aligned_cols=120 Identities=28% Similarity=0.346 Sum_probs=105.4
Q ss_pred hhcccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 013471 146 LKSDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDK 225 (442)
Q Consensus 146 ~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 225 (442)
...+.....|..+..|.+|||+||+.|+..+++.|+++|+.+|..+....||||+|+.+||.++|+.|+++.+|+|..+.
T Consensus 19 wld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavne 98 (448)
T KOG0195|consen 19 WLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNE 98 (448)
T ss_pred EecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhc
Confidence 44566677888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC--CCChHHHHH
Q 013471 226 FGNTPLLEAIKCGHDGVTSLLVKEGASLNVD--DAGSFLCTA 265 (442)
Q Consensus 226 ~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~--~~~~~L~~A 265 (442)
.|+||||+||..|...+.+-|+..|+-++.. .+.|||-.|
T Consensus 99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 9999999999999988888888887766543 334555443
No 75
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.72 E-value=1.9e-16 Score=129.34 Aligned_cols=123 Identities=46% Similarity=0.677 Sum_probs=88.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcC
Q 013471 190 TDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARG 269 (442)
Q Consensus 190 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g 269 (442)
++..|.||||+|+..|+.+++++|+++|++.+..+..|.||+|.|+..++.+++++|++.|+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~------------------ 64 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA------------------ 64 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC------------------
Confidence 34567788888888888888888887777777777777777777777777666666666554
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 013471 270 DSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLL 343 (442)
Q Consensus 270 ~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~L 343 (442)
+++..+..|.||+|.|+..++.+++++|+++|.+++..+..|.||+++|...++.+++++|
T Consensus 65 -------------~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 65 -------------DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred -------------CccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 3444555666777777777777777777777777777777777777777777777777766
No 76
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.72 E-value=2.3e-16 Score=128.85 Aligned_cols=98 Identities=39% Similarity=0.522 Sum_probs=83.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Q 013471 257 DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN 336 (442)
Q Consensus 257 ~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 336 (442)
++.|||+.|+..++.+++++|++.|.+.+..+..|.||||.|+..++.+++++|+++|++++..+..|.||+|.|+..++
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~ 85 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGN 85 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCc
Confidence 35566777777777777777777777777888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCccccc
Q 013471 337 KNLIKLLEDAECTQLSEF 354 (442)
Q Consensus 337 ~~~v~~Ll~~~a~~~~~~ 354 (442)
.+++++|++++.......
T Consensus 86 ~~~~~~L~~~~~~~~~~~ 103 (126)
T cd00204 86 LDVVKLLLKHGADVNARD 103 (126)
T ss_pred HHHHHHHHHcCCCCcccC
Confidence 999999999885544433
No 77
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.69 E-value=6.2e-16 Score=154.41 Aligned_cols=162 Identities=24% Similarity=0.317 Sum_probs=141.3
Q ss_pred cccccchhhhhHHHHHHHhc---CCHHHHHHHHHcCCC-CCC----CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 013471 152 FHIGKHEAELALRVNSAAYH---GDLYQLKGLIRAGAD-PNK----TDYDGRSPLHLATSRGYEDITLFLIQKGVDINIK 223 (442)
Q Consensus 152 ~~~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~-~~~----~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 223 (442)
..++.....|.|.||.|..+ ++.++++.|++.-+. +|. -...|+||||+|+.+.+.++|++|++.|||++.+
T Consensus 134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aR 213 (782)
T KOG3676|consen 134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHAR 213 (782)
T ss_pred hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhH
Confidence 55566678899999999973 456889999986433 221 1356999999999999999999999999998753
Q ss_pred C-----------------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHH
Q 013471 224 D-----------------------KFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVL 278 (442)
Q Consensus 224 ~-----------------------~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll 278 (442)
. ..|..||.+||..++.+++++|+++|+|++.+| |+|.||..+..-..++-++++
T Consensus 214 a~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 214 ACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred hhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHH
Confidence 2 137789999999999999999999999999977 569999999999999999999
Q ss_pred HCCCC--CCCCCCCCCcHHHHHHHhChHHHHHHHHHC
Q 013471 279 SNGVD--PSSRDYDHRTPLHVAASEGLYLMAKLLLEA 313 (442)
Q Consensus 279 ~~g~~--~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ 313 (442)
++|++ ...+|..|-|||-+||..|..++.+.+++.
T Consensus 294 ~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 294 ELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred hcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99999 889999999999999999999999999987
No 78
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.63 E-value=4.2e-15 Score=134.69 Aligned_cols=135 Identities=40% Similarity=0.541 Sum_probs=114.5
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHH
Q 013471 187 PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAV 266 (442)
Q Consensus 187 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~ 266 (442)
....+..+.+++|.|+..+..+++++++..|++++.++..|.||||+|+..++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~-------------------------- 119 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNP-------------------------- 119 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCc--------------------------
Confidence 345566788999999999999999999999999999999999999999998883
Q ss_pred HcCCHHHHHHHHHCCC---CCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 013471 267 ARGDSDFLKRVLSNGV---DPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLL 343 (442)
Q Consensus 267 ~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~L 343 (442)
..++.++++.|++.|+ ..+.++..|+||||+|+..|+.+++++|++.|++++..+..|.|+++.|+..++.++++.+
T Consensus 120 ~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 199 (235)
T COG0666 120 PEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLL 199 (235)
T ss_pred ccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHH
Confidence 2333455555555555 5566789999999999999999999999999999999999999999999999999999999
Q ss_pred HHcC
Q 013471 344 EDAE 347 (442)
Q Consensus 344 l~~~ 347 (442)
++.+
T Consensus 200 ~~~~ 203 (235)
T COG0666 200 LDKG 203 (235)
T ss_pred HhcC
Confidence 9976
No 79
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.61 E-value=1.7e-15 Score=143.03 Aligned_cols=61 Identities=26% Similarity=0.637 Sum_probs=59.8
Q ss_pred HHHHHhhhhhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 75 KISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 75 ~i~~~l~~~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
+|+.+++..+++++++|+.|.++++.+++.++++.+|.|++.+.++|+..+.||++..|.+
T Consensus 299 eIA~nvh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L 359 (536)
T KOG0500|consen 299 EIAINVHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKL 359 (536)
T ss_pred HhHHHHHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEE
Confidence 8999999999999999999999999999999999999999999999999999999999987
No 80
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.58 E-value=1.4e-14 Score=105.84 Aligned_cols=92 Identities=36% Similarity=0.555 Sum_probs=84.7
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 013471 164 RVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVT 243 (442)
Q Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv 243 (442)
-+.+++++|.++-|+..+..|.++|.+- .|+||||+|+-.|+.+++++|+..|++++.+|+.|.|||-.|+..||.++|
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 4789999999999999999998888664 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCcC
Q 013471 244 SLLVKEGASLNVD 256 (442)
Q Consensus 244 ~~Ll~~g~~~~~~ 256 (442)
++|++.|++-...
T Consensus 84 klLL~~GAdrt~~ 96 (117)
T KOG4214|consen 84 KLLLQNGADRTIH 96 (117)
T ss_pred HHHHHcCccccee
Confidence 9999999875543
No 81
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.57 E-value=2.2e-14 Score=129.91 Aligned_cols=128 Identities=38% Similarity=0.502 Sum_probs=107.8
Q ss_pred cchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC-----HHHHHHHHHcCC---CCCCCCCCC
Q 013471 156 KHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGY-----EDITLFLIQKGV---DINIKDKFG 227 (442)
Q Consensus 156 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-----~~~v~~Ll~~ga---~~~~~~~~g 227 (442)
..+..+.++++.|+..++.+.+++++..|++++.++..|.||||+|+..|+ .++++.|++.|+ ..+.++..|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g 147 (235)
T COG0666 68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG 147 (235)
T ss_pred cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence 344446789999999999999999999999999999999999999999999 999999999999 566679999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHH
Q 013471 228 NTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMA 307 (442)
Q Consensus 228 ~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv 307 (442)
.||||+|+..|+.+++++|++.|++++ ..+..|.|+++.|+..++.+++
T Consensus 148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~-------------------------------~~~~~g~t~l~~a~~~~~~~~~ 196 (235)
T COG0666 148 NTPLHWAALNGDADIVELLLEAGADPN-------------------------------SRNSYGVTALDPAAKNGRIELV 196 (235)
T ss_pred CchhHHHHHcCchHHHHHHHhcCCCCc-------------------------------ccccCCCcchhhhcccchHHHH
Confidence 999999999998888888888766555 4456677777777777777777
Q ss_pred HHHHHCC
Q 013471 308 KLLLEAG 314 (442)
Q Consensus 308 ~~Ll~~g 314 (442)
+.+++.+
T Consensus 197 ~~l~~~~ 203 (235)
T COG0666 197 KLLLDKG 203 (235)
T ss_pred HHHHhcC
Confidence 7777654
No 82
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.56 E-value=1.3e-14 Score=106.09 Aligned_cols=102 Identities=25% Similarity=0.221 Sum_probs=77.0
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcC-CCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHH
Q 013471 230 PLLEAIKCGHDGVTSLLVKEGASLNVD-DAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAK 308 (442)
Q Consensus 230 pL~~A~~~~~~~iv~~Ll~~g~~~~~~-~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~ 308 (442)
-+.|++++|..+-|+-.+..|.+++.. .+++|||+|+.+|..+++++|+..|++++.+|..|-|||.-|+..||.++|+
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVk 84 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVK 84 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHH
Confidence 355667777777777777777666543 4457777777777777777777788888888888888888888888888888
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHH
Q 013471 309 LLLEAGASVFTKDRWGNTPLDEG 331 (442)
Q Consensus 309 ~Ll~~ga~~~~~~~~g~tpl~~A 331 (442)
+|+++|||-..+..+|.+.+..+
T Consensus 85 lLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 85 LLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHHcCcccceeCCCchhHHhhc
Confidence 88888888887777787766544
No 83
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.51 E-value=1.6e-14 Score=99.93 Aligned_cols=55 Identities=40% Similarity=0.524 Sum_probs=33.6
Q ss_pred HHHCC-CCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q 013471 277 VLSNG-VDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEG 331 (442)
Q Consensus 277 Ll~~g-~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A 331 (442)
|+++| ++++.+|..|.||||+||..|+.+++++|+++|++++.+|..|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 89999999999999999999999999999999999999999999999997
No 84
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.49 E-value=1.4e-13 Score=121.34 Aligned_cols=57 Identities=26% Similarity=0.417 Sum_probs=33.0
Q ss_pred CCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 013471 290 DHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA 346 (442)
Q Consensus 290 ~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~ 346 (442)
.+.||||.|+..|+.++.++|++.|+.+...|.-|+|+-.+|+.-|+.++|..+-++
T Consensus 78 ~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 78 TLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred ccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 345555555555555555555555555555555566666666666666665555443
No 85
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.48 E-value=2.7e-13 Score=141.40 Aligned_cols=88 Identities=38% Similarity=0.557 Sum_probs=85.4
Q ss_pred hHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 013471 162 ALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDG 241 (442)
Q Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~ 241 (442)
.+.|+.|+..|+.+.++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 83 ~~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 83 TVELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc
Q 013471 242 VTSLLVKE 249 (442)
Q Consensus 242 iv~~Ll~~ 249 (442)
++++|+++
T Consensus 163 iv~~Ll~~ 170 (664)
T PTZ00322 163 VVQLLSRH 170 (664)
T ss_pred HHHHHHhC
Confidence 99999998
No 86
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.48 E-value=4.2e-14 Score=97.84 Aligned_cols=55 Identities=45% Similarity=0.642 Sum_probs=33.3
Q ss_pred HHHcC-CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 013471 180 LIRAG-ADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 234 (442)
Q Consensus 180 Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 234 (442)
|+++| ++++.+|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56778 88999999999999999999999999999999999999999999999987
No 87
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.47 E-value=1.2e-13 Score=95.11 Aligned_cols=54 Identities=44% Similarity=0.597 Sum_probs=41.8
Q ss_pred CCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 013471 291 HRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLE 344 (442)
Q Consensus 291 g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll 344 (442)
|+||||+|+..|+.+++++|+++|++++.+|.+|+||+|+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678888888888888888888888888888888888888888888888888875
No 88
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.47 E-value=3.2e-13 Score=140.87 Aligned_cols=100 Identities=24% Similarity=0.273 Sum_probs=70.7
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHH
Q 013471 197 PLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFL 274 (442)
Q Consensus 197 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v 274 (442)
+|+.|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV 164 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 5778888888888888888888888888888888888888888887777777777665543 33566666666666666
Q ss_pred HHHHHC-------CCCCCCCCCCCCcHHH
Q 013471 275 KRVLSN-------GVDPSSRDYDHRTPLH 296 (442)
Q Consensus 275 ~~Ll~~-------g~~~~~~~~~g~t~Lh 296 (442)
++|+++ |++.+..+..|.+|+.
T Consensus 165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~ 193 (664)
T PTZ00322 165 QLLSRHSQCHFELGANAKPDSFTGKPPSL 193 (664)
T ss_pred HHHHhCCCcccccCCCCCccccCCCCccc
Confidence 666555 5555555555555544
No 89
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.44 E-value=2.5e-13 Score=93.46 Aligned_cols=54 Identities=41% Similarity=0.656 Sum_probs=28.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 013471 194 GRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLV 247 (442)
Q Consensus 194 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll 247 (442)
|.||||+|++.|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 455555555555555555555555555555555555555555555555555553
No 90
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=7.5e-13 Score=125.64 Aligned_cols=93 Identities=31% Similarity=0.456 Sum_probs=86.0
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 013471 261 FLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLI 340 (442)
Q Consensus 261 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v 340 (442)
.|.-|+-.|.+++|+..+..--|+...+..|-||||-|++.||.+||++|++.|+++|..|.+||||||+|+.+++..++
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 36668889999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcccc
Q 013471 341 KLLEDAECTQLSE 353 (442)
Q Consensus 341 ~~Ll~~~a~~~~~ 353 (442)
+.|++.|+.....
T Consensus 633 kqLVe~GaavfAs 645 (752)
T KOG0515|consen 633 KQLVESGAAVFAS 645 (752)
T ss_pred HHHHhccceEEee
Confidence 9999999876543
No 91
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=4.3e-13 Score=127.25 Aligned_cols=92 Identities=32% Similarity=0.441 Sum_probs=86.4
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 013471 164 RVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVT 243 (442)
Q Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv 243 (442)
.|..|+..|.+++|+..+..--|+...+..|.|+||-|+..||.++|++|++.|+++|..|.+||||||.|+.+++..++
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 46789999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCc
Q 013471 244 SLLVKEGASLNV 255 (442)
Q Consensus 244 ~~Ll~~g~~~~~ 255 (442)
+.|++.|+-+-.
T Consensus 633 kqLVe~GaavfA 644 (752)
T KOG0515|consen 633 KQLVESGAAVFA 644 (752)
T ss_pred HHHHhccceEEe
Confidence 999999986543
No 92
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.43 E-value=1.4e-12 Score=115.16 Aligned_cols=115 Identities=23% Similarity=0.226 Sum_probs=91.8
Q ss_pred hHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCCH
Q 013471 162 ALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINI-KDKFGNTPLLEAIKCGHD 240 (442)
Q Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~~~~ 240 (442)
..||..++..|+.+....||+.--++|.+|..|.|||..|+..|+.++|++|++.|+|+|. ++..+.||||+|+.+|+.
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~ 92 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ 92 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence 3578999999999999999987666889999999999999999999999999999999984 556788999999999998
Q ss_pred HHHHHHHHcCCCCCcCC--CChHHHHHHHcCCHHHHHH
Q 013471 241 GVTSLLVKEGASLNVDD--AGSFLCTAVARGDSDFLKR 276 (442)
Q Consensus 241 ~iv~~Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~ 276 (442)
++.++|++.|+.+..-+ ++|+-..|+--|+.++|..
T Consensus 93 dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~i 130 (396)
T KOG1710|consen 93 DVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAI 130 (396)
T ss_pred hHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHH
Confidence 88888888887766533 2355555555555555543
No 93
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.39 E-value=5.2e-13 Score=128.52 Aligned_cols=132 Identities=27% Similarity=0.552 Sum_probs=118.7
Q ss_pred EeeeccC--CCCC-hhHHHHHHHHHHHHHHhh-hceeeEEeCCceEEEechHHHHHHHHhh-hhhhhhhhcCcHHHHH--
Q 013471 2 EFAFFRG--LPEN-LSILDIAGQIAFLVDIIM-QFFLAYRDSQTYCLVYKLTRIALRYLKS-SFIIDLLSCLPWDVIY-- 74 (442)
Q Consensus 2 ~~~f~~~--~~~~-~~~~~~~~~~~~~~d~~~-~f~~~~~~~~~~~~v~~~~~i~~~y~~~-~~~~d~~~~~p~~~~~-- 74 (442)
+.+|... +++. |+++|+++|++|++|+++ +-|.-|+..|.. |.|.+...+||+++ -|-+|+++.+|.++.|
T Consensus 249 R~sfPyQT~dN~~~Wli~Dy~cDiIYllDmlf~q~Rl~fvrgG~~--ik~kndtrk~Yl~sr~FklDllsiLPldllY~~ 326 (815)
T KOG0499|consen 249 RLSFPYQTADNIHYWLIADYICDIIYLLDMLFIQPRLQFVRGGDI--IKDKNDTRKHYLTSRKFKLDLLSILPLDLLYLF 326 (815)
T ss_pred eccCCccccccchhhhhHHHHhhHHHHHHHhhhhhhheeeeCceE--EEechHHHHHHHHhhhhhhhHHhhhhHHHHHHH
Confidence 4556543 2332 999999999999999987 899999977766 99999999999998 8999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 013471 75 -------------------------------------------------------------------------------- 74 (442)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (442)
T Consensus 327 ~G~~p~wR~~R~lK~~sF~e~~~~Le~i~s~~y~~RV~rT~~YmlyilHinacvYY~~SayqglG~~rWVydg~Gn~YiR 406 (815)
T KOG0499|consen 327 FGFNPMWRANRMLKYTSFFEFNHHLESIMSKAYIYRVIRTTGYLLYILHINACVYYWASAYQGLGTTRWVYDGEGNEYIR 406 (815)
T ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHhhhHHHHHHHHhhcccccceeEEcCCCCceee
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 013471 75 -------------------------------------------------------------------------------- 74 (442)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (442)
T Consensus 407 Cyyfa~kt~~tiG~~P~P~~~~E~Vf~~~~w~mGVFvFslliGQmRDvi~aAt~nq~~fr~~mD~tl~ym~~~~i~kevq 486 (815)
T KOG0499|consen 407 CYYFAVKTLITIGGLPEPQTLFEIVFQLLNWFMGVFVFSLLIGQMRDVIGAATANQNYFRACMDDTLAYMNNYSIPKEVQ 486 (815)
T ss_pred ehhhHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence
Q ss_pred --------------------------------HHHHHhhhhhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCc
Q 013471 75 --------------------------------KISQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGN 122 (442)
Q Consensus 75 --------------------------------~i~~~l~~~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~ 122 (442)
+++-.++..++.+|.||++|++..|..++.++.+-.|.|++.+..+|+
T Consensus 487 nRVr~WyeyTW~sQr~LDEs~ll~~LP~klq~dlAi~V~y~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGe 566 (815)
T KOG0499|consen 487 NRVRTWYEYTWDSQRMLDESDLLKTLPTKLQLDLAIDVNYSILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGE 566 (815)
T ss_pred HHHHHHHHhhhhhhccccHHHHHHhcchhheeeeeEEeehhhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeeccc
Confidence 566677889999999999999999999999999999999999999999
Q ss_pred ccceeEEEeeccc
Q 013471 123 VVDQLYFVCHGVL 135 (442)
Q Consensus 123 ~~~~ly~i~~g~~ 135 (442)
....||++-+|.+
T Consensus 567 iGkEMYIIk~Gqv 579 (815)
T KOG0499|consen 567 IGKEMYIIKHGQV 579 (815)
T ss_pred ccceeEEeecceE
Confidence 9999999999887
No 94
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.02 E-value=3.8e-10 Score=106.31 Aligned_cols=104 Identities=34% Similarity=0.476 Sum_probs=93.4
Q ss_pred cccccccccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCC
Q 013471 148 SDITFHIGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQK-GVDINIKDKF 226 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~ 226 (442)
.|.....+..+..+..++.+|++.|++..++.+.-.|.|++..|.+.+|+||.||..|+.+++++|++. +.+++.+|.+
T Consensus 493 ~DPRR~~~~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw 572 (622)
T KOG0506|consen 493 IDPRREGGPRENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRW 572 (622)
T ss_pred CCcccccCcccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhcc
Confidence 344444445566677889999999999999999999999999999999999999999999999999996 9999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCC
Q 013471 227 GNTPLLEAIKCGHDGVTSLLVKEGA 251 (442)
Q Consensus 227 g~tpL~~A~~~~~~~iv~~Ll~~g~ 251 (442)
|+|||.-|...+|.+++++|-+.-.
T Consensus 573 ~rtPlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 573 GRTPLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred CCCcchHhHhcCcHHHHHHHHHHhc
Confidence 9999999999999999999987643
No 95
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.97 E-value=5.5e-10 Score=105.21 Aligned_cols=89 Identities=43% Similarity=0.654 Sum_probs=84.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHH
Q 013471 260 SFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEA-GASVFTKDRWGNTPLDEGRMCGNKN 338 (442)
Q Consensus 260 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~ 338 (442)
.++++|+..|++..++.+.-.|.|++.+|++.+|+||+||..|+.+++++|++. +.+++.+|++|+|||+-|..-+|.+
T Consensus 508 i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~ 587 (622)
T KOG0506|consen 508 INVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKE 587 (622)
T ss_pred hhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHH
Confidence 469999999999999999999999999999999999999999999999999985 7999999999999999999999999
Q ss_pred HHHHHHHcCC
Q 013471 339 LIKLLEDAEC 348 (442)
Q Consensus 339 ~v~~Ll~~~a 348 (442)
++++|.+...
T Consensus 588 v~k~L~~~~~ 597 (622)
T KOG0506|consen 588 VVKLLEEAQY 597 (622)
T ss_pred HHHHHHHHhc
Confidence 9999988654
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.93 E-value=4.3e-09 Score=99.75 Aligned_cols=88 Identities=34% Similarity=0.393 Sum_probs=81.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 013471 261 FLCTAVARGDSDFLKRVLSNGVDPSSRD-YDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNL 339 (442)
Q Consensus 261 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~ 339 (442)
-||..++.|+.+..-.|+..|+++|..+ ..|.||||+|++.|+.-=+++|+-+|||+...|.+|.||+.+|...||-++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 4899999999999999999999999876 579999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC
Q 013471 340 IKLLEDAEC 348 (442)
Q Consensus 340 v~~Ll~~~a 348 (442)
.+-|++..-
T Consensus 216 aeRl~e~~y 224 (669)
T KOG0818|consen 216 AERLVEIQY 224 (669)
T ss_pred HHHHHHHHH
Confidence 999987543
No 97
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.90 E-value=7.9e-09 Score=97.97 Aligned_cols=88 Identities=30% Similarity=0.360 Sum_probs=82.2
Q ss_pred hhHHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 013471 161 LALRVNSAAYHGDLYQLKGLIRAGADPNKTD-YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 239 (442)
Q Consensus 161 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~ 239 (442)
..-.||..++.|+++..-.|+..|+++|..+ ..|.||||.|++.|+..-+++|+-+|||+...|.+|.||+.+|-..||
T Consensus 133 LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 133 LSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence 4457999999999999999999999999887 569999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 013471 240 DGVTSLLVK 248 (442)
Q Consensus 240 ~~iv~~Ll~ 248 (442)
.++.+.|++
T Consensus 213 ~~laeRl~e 221 (669)
T KOG0818|consen 213 HELAERLVE 221 (669)
T ss_pred hHHHHHHHH
Confidence 988887776
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.87 E-value=2.9e-09 Score=62.85 Aligned_cols=30 Identities=50% Similarity=0.645 Sum_probs=25.2
Q ss_pred CCCcHHHHHHHhChHHHHHHHHHCCCCCCC
Q 013471 290 DHRTPLHVAASEGLYLMAKLLLEAGASVFT 319 (442)
Q Consensus 290 ~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~ 319 (442)
+|+||||+||..|+.++|++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 478888888888888888888888888863
No 99
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.83 E-value=1e-08 Score=98.72 Aligned_cols=88 Identities=31% Similarity=0.446 Sum_probs=70.3
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Q 013471 260 SFLCTAVARGDSDFLKRVLSNGVD--PSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 337 (442)
Q Consensus 260 ~~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 337 (442)
+.||+|+..|+-++|+|++++|.. ++..|..|.|+||.|+..++-.+.++|++.|+.+...|..|.||-..|-+.|..
T Consensus 901 sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~ 980 (1004)
T KOG0782|consen 901 SLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDP 980 (1004)
T ss_pred hHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCCc
Confidence 445555555555555555555421 345667899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 013471 338 NLIKLLEDAE 347 (442)
Q Consensus 338 ~~v~~Ll~~~ 347 (442)
++..+|.++.
T Consensus 981 dlaayle~rq 990 (1004)
T KOG0782|consen 981 DLAAYLESRQ 990 (1004)
T ss_pred hHHHHHhhhh
Confidence 9999997644
No 100
>PF13606 Ank_3: Ankyrin repeat
Probab=98.80 E-value=6.7e-09 Score=61.28 Aligned_cols=29 Identities=45% Similarity=0.888 Sum_probs=20.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q 013471 193 DGRSPLHLATSRGYEDITLFLIQKGVDIN 221 (442)
Q Consensus 193 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 221 (442)
+|+||||+||+.|+.+++++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36777777777777777777777777765
No 101
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.78 E-value=8.2e-09 Score=62.74 Aligned_cols=33 Identities=45% Similarity=0.623 Sum_probs=28.8
Q ss_pred CCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCC
Q 013471 290 DHRTPLHVAASEGLYLMAKLLLEAGASVFTKDR 322 (442)
Q Consensus 290 ~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~ 322 (442)
+|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 588999999999999999999999999888764
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.74 E-value=1.7e-08 Score=61.37 Aligned_cols=32 Identities=50% Similarity=0.893 Sum_probs=25.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 013471 193 DGRSPLHLATSRGYEDITLFLIQKGVDINIKD 224 (442)
Q Consensus 193 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 224 (442)
+|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 47788888888888888888888888877765
No 103
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.72 E-value=6.6e-09 Score=104.18 Aligned_cols=85 Identities=26% Similarity=0.229 Sum_probs=78.9
Q ss_pred cccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 013471 154 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTD-YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLL 232 (442)
Q Consensus 154 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 232 (442)
.+..|..|+++||.|+..|..+++++|+++|++++.+| ..|+||||.|+..|+.+|+-+||.+|+.+..+|++|.+||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 45677889999999999999999999999999999998 56999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 013471 233 EAIKCG 238 (442)
Q Consensus 233 ~A~~~~ 238 (442)
.-++-.
T Consensus 125 ~~~r~~ 130 (1267)
T KOG0783|consen 125 FLSRVL 130 (1267)
T ss_pred HHhhcc
Confidence 988743
No 104
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.69 E-value=9.5e-09 Score=103.07 Aligned_cols=83 Identities=31% Similarity=0.474 Sum_probs=52.4
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHH
Q 013471 187 PNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDK-FGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTA 265 (442)
Q Consensus 187 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A 265 (442)
.|..|..|+|+||+|+..|..+++++|+++|+++..+|. .|+||||-|+.+|+.+++-.|+.+|
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g--------------- 109 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG--------------- 109 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcC---------------
Confidence 455666677777777777777777777777777666663 4566666655555555555444444
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 013471 266 VARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAAS 300 (442)
Q Consensus 266 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~ 300 (442)
+.+..+|.+|.+||...++
T Consensus 110 ----------------~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 110 ----------------RSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred ----------------CceEEecccCCCHHHHHhh
Confidence 4445667777888776655
No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.69 E-value=5.4e-08 Score=94.11 Aligned_cols=89 Identities=33% Similarity=0.440 Sum_probs=80.0
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Q 013471 262 LCTAVARGDSDFLKRVLSNGVDP----SSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 337 (442)
Q Consensus 262 L~~A~~~g~~~~v~~Ll~~g~~~----~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 337 (442)
|.-|+...++..+-+|+.+|... ...+.+|+|+||+||..|+..+.++|+-+|+|+..+|..|+|+|.||.+.|..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence 66788888899999999998543 23467789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCc
Q 013471 338 NLIKLLEDAECTQ 350 (442)
Q Consensus 338 ~~v~~Ll~~~a~~ 350 (442)
+++.+|+.+|...
T Consensus 708 ec~d~llq~gcp~ 720 (749)
T KOG0705|consen 708 ECIDVLLQYGCPD 720 (749)
T ss_pred HHHHHHHHcCCCc
Confidence 9999999999753
No 106
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.67 E-value=7.3e-08 Score=92.93 Aligned_cols=118 Identities=21% Similarity=0.272 Sum_probs=76.4
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHcCCHHH
Q 013471 165 VNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVD--INIKDKFGNTPLLEAIKCGHDGV 242 (442)
Q Consensus 165 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~tpL~~A~~~~~~~i 242 (442)
+..|+..+++--++....+|-++-.++.+..|.||+|+..|+-++|+|++++|.. ++..+..|.
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~ge-------------- 935 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGE-------------- 935 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhh--------------
Confidence 4556666666666666666666666666666777777777777777777766543 233344444
Q ss_pred HHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHC
Q 013471 243 TSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEA 313 (442)
Q Consensus 243 v~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ 313 (442)
|+||.|+..++..+.++|++.|+.+...|..|.||-..|-+.|..++..||-.+
T Consensus 936 -----------------t~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 936 -----------------TALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred -----------------HHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 445555555555555555555666667778888888888888888888887653
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.64 E-value=1.2e-07 Score=91.88 Aligned_cols=94 Identities=29% Similarity=0.374 Sum_probs=83.9
Q ss_pred hHHHHHHHhcCCHHHHHHHHHcCCC--CC--CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 013471 162 ALRVNSAAYHGDLYQLKGLIRAGAD--PN--KTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKC 237 (442)
Q Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~g~~--~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 237 (442)
-..|..|....++..+-+||.+|.. +| ..+.+|+|+||+||+.|+..+.++|+-+|+|+..+|..|+|+|.||-..
T Consensus 625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA 704 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence 3468889999999999999999865 33 3356789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCc
Q 013471 238 GHDGVTSLLVKEGASLNV 255 (442)
Q Consensus 238 ~~~~iv~~Ll~~g~~~~~ 255 (442)
|..+++..|+++|+..+.
T Consensus 705 ~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 705 GSQECIDVLLQYGCPDEC 722 (749)
T ss_pred ccHHHHHHHHHcCCCccc
Confidence 999999999999987653
No 108
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.62 E-value=9.4e-08 Score=92.00 Aligned_cols=86 Identities=37% Similarity=0.402 Sum_probs=66.1
Q ss_pred HHHHHHHcCCHHHHHHHH--HCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 013471 261 FLCTAVARGDSDFLKRVL--SNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKN 338 (442)
Q Consensus 261 ~L~~A~~~g~~~~v~~Ll--~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 338 (442)
|+|+++...+.+-+..++ +.+..++.+|..|+||||+|+..|+.+.++.|+.+||++..+|+.|++|||.|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 366666666555444433 234567788888899999999999999999999999999899999999999999999888
Q ss_pred HHHHHHHc
Q 013471 339 LIKLLEDA 346 (442)
Q Consensus 339 ~v~~Ll~~ 346 (442)
++..++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 77666643
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.61 E-value=9.8e-08 Score=91.87 Aligned_cols=87 Identities=28% Similarity=0.412 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHc--CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 013471 163 LRVNSAAYHGDLYQLKGLIRA--GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 240 (442)
Q Consensus 163 t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~ 240 (442)
.|+|+++...+.+-+..++.. +..++..|..|.||||+|+.-|+.+.++.|+.+|+++..++..|++|||.|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 469999999888888775543 456788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc
Q 013471 241 GVTSLLVKE 249 (442)
Q Consensus 241 ~iv~~Ll~~ 249 (442)
.++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 887777654
No 110
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.41 E-value=1.5e-06 Score=88.59 Aligned_cols=118 Identities=19% Similarity=0.151 Sum_probs=91.1
Q ss_pred HHHHHHhcCCHHHHHHHHHcC----CCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 013471 164 RVNSAAYHGDLYQLKGLIRAG----ADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 239 (442)
Q Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~ 239 (442)
....|+..|+.-.|+..++.. .++|.+|.-|+++|+.|+.+.+.+++++|++++... ..+|-+|+..|.
T Consensus 28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~ 100 (822)
T KOG3609|consen 28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGS 100 (822)
T ss_pred HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHH
Confidence 467899999999999998753 457888999999999999999999999999986544 468899999999
Q ss_pred HHHHHHHHHcCCCCC------------cCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 013471 240 DGVTSLLVKEGASLN------------VDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRD 288 (442)
Q Consensus 240 ~~iv~~Ll~~g~~~~------------~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 288 (442)
.++|+.++.+-.... ....-||+.+||..+++|+++.|+.+|+.+....
T Consensus 101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH 161 (822)
T KOG3609|consen 101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPH 161 (822)
T ss_pred HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCc
Confidence 999999998743321 1223367777777777777777777776665443
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.37 E-value=1.1e-06 Score=73.77 Aligned_cols=69 Identities=23% Similarity=0.140 Sum_probs=64.2
Q ss_pred CCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 013471 281 GVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAG-ASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAECT 349 (442)
Q Consensus 281 g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~ 349 (442)
+.++|.+|..|||||+.|+..|+.+.+.||+.+| +.+.+.|..|.++..+|-+.|+.++++.|.+.-..
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4678999999999999999999999999999999 89999999999999999999999999999986443
No 112
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.37 E-value=2.9e-07 Score=96.25 Aligned_cols=91 Identities=37% Similarity=0.420 Sum_probs=83.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Q 013471 256 DDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG 335 (442)
Q Consensus 256 ~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 335 (442)
..+.++||.|+.++..-++++|+++|+++|..|..|+||||.+...|+...+..|+++|++.+..+.+|++|+++|....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred CHHHHHHHHHc
Q 013471 336 NKNLIKLLEDA 346 (442)
Q Consensus 336 ~~~~v~~Ll~~ 346 (442)
+.+.+-++.-.
T Consensus 734 ~~d~~~l~~l~ 744 (785)
T KOG0521|consen 734 NADIVLLLRLA 744 (785)
T ss_pred cccHHHHHhhh
Confidence 77776665543
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.36 E-value=2.7e-06 Score=86.81 Aligned_cols=121 Identities=24% Similarity=0.284 Sum_probs=85.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHH
Q 013471 192 YDGRSPLHLATSRGYEDITLFLIQKG----VDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVA 267 (442)
Q Consensus 192 ~~g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~ 267 (442)
..+.--...|+..|+.-.|+..++.. .++|..|.-|.++|+.|+.+.+.++.++|++++... +.+|.+|+.
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-----gdALL~aI~ 97 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-----GDALLLAIA 97 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-----chHHHHHHH
Confidence 34555778899999999999988852 467889999999999999999999999999987655 457888888
Q ss_pred cCCHHHHHHHHHCCCCCCC----------CCCCCCcHHHHHHHhChHHHHHHHHHCCCCC
Q 013471 268 RGDSDFLKRVLSNGVDPSS----------RDYDHRTPLHVAASEGLYLMAKLLLEAGASV 317 (442)
Q Consensus 268 ~g~~~~v~~Ll~~g~~~~~----------~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~ 317 (442)
.|..++|+.++.+-..... .-..+-|||.+||..++.||++.|+++|+++
T Consensus 98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 8888888888876432211 1112334444444444444444444444443
No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.29 E-value=1.9e-06 Score=79.63 Aligned_cols=73 Identities=25% Similarity=0.276 Sum_probs=62.8
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 013471 164 RVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKC 237 (442)
Q Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 237 (442)
-|+.||+.|+++.|++|++.|.++|..|....+||.+|+..||.++|++|+++||-...-..+|... |+++.+
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 4899999999999999999999999999999999999999999999999999999766544555544 344433
No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.21 E-value=4e-06 Score=70.46 Aligned_cols=69 Identities=19% Similarity=0.221 Sum_probs=58.0
Q ss_pred CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 013471 184 GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKG-VDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGAS 252 (442)
Q Consensus 184 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~ 252 (442)
+.++|.+|..|+|||+.|+..|..+.+.||+.+| +.+...|..|.+++.+|-+.|..++++.|.+...+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4567888888888888888888888888888888 88888888888888888888888888888876433
No 116
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.13 E-value=6.7e-06 Score=76.11 Aligned_cols=58 Identities=34% Similarity=0.427 Sum_probs=35.0
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCC
Q 013471 261 FLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF 318 (442)
Q Consensus 261 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~ 318 (442)
-|..||+.|+++.|++|++.|.++|++|....+||.+|+..||.++||+|+++||-..
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~ 96 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS 96 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence 3556666666666666666666666666666666666666666666666666665433
No 117
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.12 E-value=2.1e-06 Score=89.90 Aligned_cols=95 Identities=33% Similarity=0.384 Sum_probs=60.2
Q ss_pred HcCCCCCCC--CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC--C
Q 013471 182 RAGADPNKT--DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD--D 257 (442)
Q Consensus 182 ~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~--~ 257 (442)
..+++.|.. -..|.|+||.|+..|..-++++|+++|+++|..|..|.+|+|.+...|+...+..|+++|++.+.. +
T Consensus 642 ~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~ 721 (785)
T KOG0521|consen 642 AHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPD 721 (785)
T ss_pred cchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCcc
Confidence 344444432 244667777777777777777777777777777777777777777777777777777777666653 3
Q ss_pred CChHHHHHHHcCCHHHHHH
Q 013471 258 AGSFLCTAVARGDSDFLKR 276 (442)
Q Consensus 258 ~~~~L~~A~~~g~~~~v~~ 276 (442)
+..++..|....+.+.+-+
T Consensus 722 ~~~~l~~a~~~~~~d~~~l 740 (785)
T KOG0521|consen 722 GKLPLDIAMEAANADIVLL 740 (785)
T ss_pred CcchhhHHhhhccccHHHH
Confidence 4466666655544444333
No 118
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.01 E-value=8.4e-06 Score=85.04 Aligned_cols=123 Identities=21% Similarity=0.144 Sum_probs=82.6
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCC--CcCCCChHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHH
Q 013471 223 KDKFGNTPLLEAIKCGHDGVTSLLVKE-GASL--NVDDAGSFLCTAVARGDSDFLKRVL-SNGVDPSSRDYDHRTPLHVA 298 (442)
Q Consensus 223 ~~~~g~tpL~~A~~~~~~~iv~~Ll~~-g~~~--~~~~~~~~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~Lh~A 298 (442)
....|++-+|+++..+..-.++.+++- |... -..++.+.+|+ |..++++..-+|. -.|..++.+|..||||||+|
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA 648 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWA 648 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchH
Confidence 334555666666666655555555553 2211 12333445555 4444444444443 35777888999999999999
Q ss_pred HHhChHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 013471 299 ASEGLYLMAKLLLEAGASV------FTKDRWGNTPLDEGRMCGNKNLIKLLEDA 346 (442)
Q Consensus 299 ~~~g~~~iv~~Ll~~ga~~------~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~ 346 (442)
+..|+..++..|++.|++. ......|.|+-..|..+|+..+.-+|-+.
T Consensus 649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 9999999999999877654 33445699999999999999888888764
No 119
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.00 E-value=8.1e-06 Score=85.17 Aligned_cols=128 Identities=20% Similarity=0.177 Sum_probs=101.6
Q ss_pred cccccchhhhhHHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCc
Q 013471 152 FHIGKHEAELALRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLI-QKGVDINIKDKFGNT 229 (442)
Q Consensus 152 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t 229 (442)
.........++|.+|.++..+..-.++.+++- |......|.+|.-.+|+ |..++.+.+-+|. -.|..++.+|..|+|
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~t 643 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWT 643 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCc
Confidence 34455566789999999999999999999885 66667778888888888 4455566655555 468899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCc--------CCCChHHHHHHHcCCHHHHHHHHHC
Q 013471 230 PLLEAIKCGHDGVTSLLVKEGASLNV--------DDAGSFLCTAVARGDSDFLKRVLSN 280 (442)
Q Consensus 230 pL~~A~~~~~~~iv~~Ll~~g~~~~~--------~~~~~~L~~A~~~g~~~~v~~Ll~~ 280 (442)
|||+|+..|+..++..|.+.|++... .++.|+-..|-.+|+..+..+|-+.
T Consensus 644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99999999999999999988775443 3355777777788888888777765
No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.40 E-value=0.00032 Score=67.63 Aligned_cols=73 Identities=30% Similarity=0.373 Sum_probs=60.2
Q ss_pred CHHHHHHHHHCCCCCC------CCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 013471 270 DSDFLKRVLSNGVDPS------SRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLL 343 (442)
Q Consensus 270 ~~~~v~~Ll~~g~~~~------~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~L 343 (442)
-...+++|.+++...| ..+..-.|+||+|+..|..++|.+||+.|+|+..+|..|+||.+++. +.++-..+
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F 479 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIF 479 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHH
Confidence 3678899998877664 34566789999999999999999999999999999999999999887 45554444
Q ss_pred HH
Q 013471 344 ED 345 (442)
Q Consensus 344 l~ 345 (442)
+.
T Consensus 480 ~a 481 (591)
T KOG2505|consen 480 IA 481 (591)
T ss_pred HH
Confidence 43
No 121
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.91 E-value=0.0016 Score=36.92 Aligned_cols=27 Identities=52% Similarity=0.786 Sum_probs=17.6
Q ss_pred CCcHHHHHHHhChHHHHHHHHHCCCCC
Q 013471 291 HRTPLHVAASEGLYLMAKLLLEAGASV 317 (442)
Q Consensus 291 g~t~Lh~A~~~g~~~iv~~Ll~~ga~~ 317 (442)
|.||+|+|+..++.++++.|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 566666666666666666666666554
No 122
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.91 E-value=0.0018 Score=36.65 Aligned_cols=27 Identities=48% Similarity=0.892 Sum_probs=16.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCC
Q 013471 194 GRSPLHLATSRGYEDITLFLIQKGVDI 220 (442)
Q Consensus 194 g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 220 (442)
|.||+|+|+..++.++++.|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 455666666666666666666655543
No 123
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.88 E-value=0.0017 Score=62.73 Aligned_cols=63 Identities=24% Similarity=0.316 Sum_probs=53.7
Q ss_pred CHHHHHHHHHcCCCCCCC------CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 013471 173 DLYQLKGLIRAGADPNKT------DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAI 235 (442)
Q Consensus 173 ~~~~v~~Ll~~g~~~~~~------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 235 (442)
-...+++|.+++++.|.. +.--.|+||+|+..|.-++|.+||+.|+||...|..|.||..++.
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 366788888887776532 344679999999999999999999999999999999999999887
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.81 E-value=0.032 Score=47.40 Aligned_cols=137 Identities=18% Similarity=0.075 Sum_probs=81.7
Q ss_pred hHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 013471 162 ALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDG 241 (442)
Q Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~ 241 (442)
...+..|++.+.+.++++.-+...+- -...++.+-.||+..+.++|+++-+. ... .+-.+....|....+.+
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L~i--~~~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---LHI--YNPEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---cCC--CCchhhhhhhhhccchh
Confidence 34677888888888888776543211 13456778888888888888888443 111 22235566677777765
Q ss_pred HH----HHHHHcCCCCCcCCCC----hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHH
Q 013471 242 VT----SLLVKEGASLNVDDAG----SFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLE 312 (442)
Q Consensus 242 iv----~~Ll~~g~~~~~~~~~----~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~ 312 (442)
+. .++.++..+....+.. .-|..|+..|-...+...+++|.+++. ++|..|+..++-.++.+++.
T Consensus 119 LyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 119 LYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 42 2233332222111111 236667777777777777777665542 66777777777777666653
No 125
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.53 E-value=0.023 Score=49.68 Aligned_cols=45 Identities=20% Similarity=0.403 Sum_probs=32.4
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHc
Q 013471 165 VNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQK 216 (442)
Q Consensus 165 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 216 (442)
|-.|+...+.+.+.-++... ..-.+++-+|..++..+++-+|+.+
T Consensus 157 ledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~~K~dva~~lls~ 201 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGNAKEDVALYLLSK 201 (284)
T ss_pred HHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcccHHHHHHHHHhh
Confidence 66788888888777776432 1235678888888888888888864
No 126
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.46 E-value=0.022 Score=48.30 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=99.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHH
Q 013471 195 RSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVARGDSDFL 274 (442)
Q Consensus 195 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v 274 (442)
...|..|+..+.+.+++..-+...+- -...++-.-.||+..+.|+|+|+ |.+....+..+-.-.|....+.++.
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI---~qnL~i~~~~~iFdIA~~~kDlsLy 120 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWI---GQNLHIYNPEDIFDIAFAKKDLSLY 120 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHH---hhccCCCCchhhhhhhhhccchhHH
Confidence 34677899999999988887653211 23556788899999999999999 4455556666778889999888763
Q ss_pred HH----HHHCCCCCCCCCCC--CCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 013471 275 KR----VLSNGVDPSSRDYD--HRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED 345 (442)
Q Consensus 275 ~~----Ll~~g~~~~~~~~~--g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~ 345 (442)
.. +.++...-+..|.. -..-|..|+..|....|.-.+++|.+++. ++|..|+..+|..++.+++.
T Consensus 121 slGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 121 SLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 21 22222111111100 11247789999999999999999988754 79999999999999998864
No 127
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.93 E-value=0.062 Score=47.07 Aligned_cols=47 Identities=23% Similarity=0.294 Sum_probs=40.0
Q ss_pred hHHHHHHHHHCC-CCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 013471 303 LYLMAKLLLEAG-ASVFT---KDRWGNTPLDEGRMCGNKNLIKLLEDAECT 349 (442)
Q Consensus 303 ~~~iv~~Ll~~g-a~~~~---~~~~g~tpl~~A~~~~~~~~v~~Ll~~~a~ 349 (442)
+..++++.+++| +++|. +-+.|.|-|+-|..+++.+++.+|+++||.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 567888999998 67764 456899999999999999999999999984
No 128
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=92.06 E-value=0.5 Score=34.41 Aligned_cols=55 Identities=20% Similarity=0.320 Sum_probs=45.2
Q ss_pred eEEEccCcHHHHHHHHhhhcCCCCCCcc-cccCCceeeE---eeeeecCCeEEEeecCC
Q 013471 388 IVLWVPHNIEELIKLAVDKLDFPDGHSI-LSEDGGKILD---VDMINDGQKLYLISETQ 442 (442)
Q Consensus 388 ~~~~lp~~~~~ll~~~~~k~~~~~~~~~-~~~~~~~i~~---i~~ird~d~~~~~~~~~ 442 (442)
+.-..-.+++||+.=+.++|+.+.+.++ +.+||-+||+ ...+-|+=+|.+++.+|
T Consensus 15 kkGV~A~sL~EL~~K~~~~L~~~~~~~lvLeeDGT~Vd~EeyF~tLpdnT~lm~L~~gq 73 (81)
T cd06537 15 RKGLTAASLQELLAKALETLLLSGVLTLVLEEDGTAVDSEDFFELLEDDTCLMVLEQGQ 73 (81)
T ss_pred eEeEEccCHHHHHHHHHHHhCCCCceEEEEecCCCEEccHHHHhhCCCCCEEEEECCCC
Confidence 3334578999999999999999866554 7789999977 88999999999998765
No 129
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=91.64 E-value=0.78 Score=33.44 Aligned_cols=46 Identities=17% Similarity=0.284 Sum_probs=29.1
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHc
Q 013471 164 RVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQK 216 (442)
Q Consensus 164 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 216 (442)
.+..|+..|+.++++.+++.+ .++ ..++..|+...+-+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 366677777777777766543 221 3466777777777777777664
No 130
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=90.69 E-value=0.52 Score=46.75 Aligned_cols=59 Identities=27% Similarity=0.577 Sum_probs=55.0
Q ss_pred HHHhhhhhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 77 ~~~l~~~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
-...|..+++.+|+|++.+++.+..+..-+..+|+.-++.|+.+++....+|+++.|.+
T Consensus 266 r~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V 324 (732)
T KOG0614|consen 266 RHEQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTV 324 (732)
T ss_pred HHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceE
Confidence 35567788899999999999999999999999999999999999999999999999987
No 131
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=90.42 E-value=0.8 Score=33.31 Aligned_cols=55 Identities=29% Similarity=0.407 Sum_probs=43.7
Q ss_pred eEEEccCcHHHHHHHHhhhcCCC-CC-CcccccCCceeeE---eeeeecCCeEEEeecCC
Q 013471 388 IVLWVPHNIEELIKLAVDKLDFP-DG-HSILSEDGGKILD---VDMINDGQKLYLISETQ 442 (442)
Q Consensus 388 ~~~~lp~~~~~ll~~~~~k~~~~-~~-~~~~~~~~~~i~~---i~~ird~d~~~~~~~~~ 442 (442)
+.-..-.|+++|+.-+.++|+.. .+ +-++.+||-+||| ...+-|+=.|.+++.+|
T Consensus 15 k~GV~A~sL~eL~~K~~~~l~l~~~~~~lvL~eDGTeVddEeYF~tLp~nT~l~~l~~gq 74 (78)
T cd01615 15 KKGVAASSLEELLSKACEKLKLPSAPVTLVLEEDGTEVDDEEYFQTLPDNTVLMLLEPGQ 74 (78)
T ss_pred eEEEEcCCHHHHHHHHHHHcCCCCCCeEEEEeCCCcEEccHHHHhcCCCCcEEEEECCCC
Confidence 33445789999999999999993 33 3457799999977 88888998888888765
No 132
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=90.01 E-value=0.64 Score=33.90 Aligned_cols=48 Identities=23% Similarity=0.286 Sum_probs=33.6
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 013471 195 RSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKE 249 (442)
Q Consensus 195 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~ 249 (442)
...+..|+..|+.|+++.+++.+ .++ ...+..|+...+-+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 34677788888888888877654 111 3567778888888888877775
No 133
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=89.94 E-value=0.076 Score=46.40 Aligned_cols=46 Identities=30% Similarity=0.497 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHhhhceeeEEeCCceEEEechHHHHHHHHhh-hhhhhhhhcCcHHHH
Q 013471 15 ILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKS-SFIIDLLSCLPWDVI 73 (442)
Q Consensus 15 ~~~~~~~~~~~~d~~~~f~~~~~~~~~~~~v~~~~~i~~~y~~~-~~~~d~~~~~p~~~~ 73 (442)
++|.+.+++|.+|+++++++.... +++|+++ |.++|++..+|..+.
T Consensus 1 ~~~~~~~~~f~~e~~l~~~~~~~~-------------~~~y~~~~~~~~d~~~~~~~~~~ 47 (200)
T PF00520_consen 1 ILEIIFDVIFILEIVLRFFALGFK-------------RRRYFRSWWNWFDFISVIPSIVS 47 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCG--------------GCCCCSHHHHHHHHHHHHHCCH
T ss_pred CChHHHHHHHHHHHHHHHHHhccH-------------HHHHhcChhhccccccccccccc
Confidence 579999999999999999986654 7889987 788999999998554
No 134
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=88.69 E-value=0.81 Score=35.60 Aligned_cols=46 Identities=30% Similarity=0.530 Sum_probs=43.3
Q ss_pred CccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 90 LFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 90 lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
+|.+.++..+.++...+....+.+++.+..+++..+.+|++..|.+
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v 46 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEV 46 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEE
Confidence 4788999999999999999999999999999999999999999987
No 135
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=88.65 E-value=1.4 Score=31.71 Aligned_cols=55 Identities=27% Similarity=0.408 Sum_probs=44.0
Q ss_pred eEEEccCcHHHHHHHHhhhcCCCC-CCcc-cccCCceeeE---eeeeecCCeEEEeecCC
Q 013471 388 IVLWVPHNIEELIKLAVDKLDFPD-GHSI-LSEDGGKILD---VDMINDGQKLYLISETQ 442 (442)
Q Consensus 388 ~~~~lp~~~~~ll~~~~~k~~~~~-~~~~-~~~~~~~i~~---i~~ird~d~~~~~~~~~ 442 (442)
+.-..-.|+++|+.-+.++|+.+. +.++ +.+||-+||| ...+-|+=.|.+++.+|
T Consensus 13 k~GV~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGT~VddEeyF~tLp~nt~l~~L~~gq 72 (74)
T smart00266 13 RKGVAASSLEELLSKVCDKLALPDSPVTLVLEEDGTIVDDEEYFQTLPDNTELMALEKGE 72 (74)
T ss_pred eEEEEcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEEccHHHHhcCCCCcEEEEEcCCC
Confidence 334457899999999999999973 3444 7799999977 78888888888887765
No 136
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=88.55 E-value=1.4 Score=32.04 Aligned_cols=53 Identities=21% Similarity=0.313 Sum_probs=43.3
Q ss_pred EEccCcHHHHHHHHhhhcCCCC-C-CcccccCCceeeE---eeeeecCCeEEEeecCC
Q 013471 390 LWVPHNIEELIKLAVDKLDFPD-G-HSILSEDGGKILD---VDMINDGQKLYLISETQ 442 (442)
Q Consensus 390 ~~lp~~~~~ll~~~~~k~~~~~-~-~~~~~~~~~~i~~---i~~ird~d~~~~~~~~~ 442 (442)
-..-.+++||+.-+.++|+... + +-++.+||-+||+ ...+-|+=+|.+++.+|
T Consensus 17 GV~A~sL~EL~~K~~~~l~~~~~~~~lvL~eDGT~Vd~EeyF~~LpdnT~lm~L~~gq 74 (78)
T cd06539 17 GVMASSLQELISKTLDALVITSGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMVLEKGQ 74 (78)
T ss_pred EEEecCHHHHHHHHHHHhCCCCCCcEEEEeCCCCEEccHHHHhhCCCCCEEEEECCCC
Confidence 3457899999999999999953 2 4457899999977 88888999999988765
No 137
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=88.51 E-value=0.85 Score=41.39 Aligned_cols=53 Identities=19% Similarity=0.429 Sum_probs=50.1
Q ss_pred hhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 83 PYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 83 ~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
..++..++|.+.+++.+.++........+++++.++.+|+..+.+|++.+|.+
T Consensus 7 ~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v 59 (236)
T PRK09392 7 IRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLV 59 (236)
T ss_pred HHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEE
Confidence 46788999999999999999999999999999999999999999999999987
No 138
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=88.06 E-value=0.97 Score=34.92 Aligned_cols=46 Identities=37% Similarity=0.623 Sum_probs=43.2
Q ss_pred CccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 90 LFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 90 lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
+|...+++.+..++..++...+.+++.+..+++..+.+|++..|.+
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v 46 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSV 46 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEE
Confidence 4788999999999999999999999999999999999999999987
No 139
>PLN02868 acyl-CoA thioesterase family protein
Probab=87.26 E-value=0.97 Score=44.94 Aligned_cols=53 Identities=25% Similarity=0.416 Sum_probs=49.8
Q ss_pred hhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 83 PYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 83 ~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
..+.++++|++.+++.+.++...+....+++++.++.+++....+|++.+|.+
T Consensus 8 ~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V 60 (413)
T PLN02868 8 EFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEA 60 (413)
T ss_pred HHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEE
Confidence 44678999999999999999999999999999999999999999999999987
No 140
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=86.92 E-value=2.1 Score=31.17 Aligned_cols=55 Identities=18% Similarity=0.245 Sum_probs=43.8
Q ss_pred eEEEccCcHHHHHHHHhhhcCCCCCC-cccccCCceeeE---eeeeecCCeEEEeecCC
Q 013471 388 IVLWVPHNIEELIKLAVDKLDFPDGH-SILSEDGGKILD---VDMINDGQKLYLISETQ 442 (442)
Q Consensus 388 ~~~~lp~~~~~ll~~~~~k~~~~~~~-~~~~~~~~~i~~---i~~ird~d~~~~~~~~~ 442 (442)
+.-..-.|+++|+.-+.++|+...+. -++.+||-+||+ ...+-|+=.|.+++.+|
T Consensus 15 k~GV~A~sL~eL~~K~~~~l~l~~~~~lvL~eDGT~Vd~EeyF~tLp~nt~l~vL~~gq 73 (79)
T cd06538 15 RKGIMADSLEDLLNKVLDALLLDCISSLVLDEDGTGVDTEEFFQALADNTVFMVLGKGQ 73 (79)
T ss_pred eEeEEcCCHHHHHHHHHHHcCCCCccEEEEecCCcEEccHHHHhhCCCCcEEEEECCCC
Confidence 33345789999999999999996443 457799999977 78888888888887665
No 141
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=86.22 E-value=2 Score=31.45 Aligned_cols=54 Identities=26% Similarity=0.321 Sum_probs=43.3
Q ss_pred EEEccCcHHHHHHHHhhhcCCC---CCCcc-cccCCceeeE---eeeeecCCeEEEeecCC
Q 013471 389 VLWVPHNIEELIKLAVDKLDFP---DGHSI-LSEDGGKILD---VDMINDGQKLYLISETQ 442 (442)
Q Consensus 389 ~~~lp~~~~~ll~~~~~k~~~~---~~~~~-~~~~~~~i~~---i~~ird~d~~~~~~~~~ 442 (442)
.-..-.|+++|+.-+.++|+.+ .+.++ +.+||-+||| ...+-|+=.|.+++.+|
T Consensus 16 ~GV~A~sL~eL~~K~~~~l~l~~~~~~~~lvL~eDGT~VddEeyF~tLp~nT~l~~L~~gq 76 (80)
T cd06536 16 HGVAASSLEELRIKACESLGFDSSSAPITLVLAEDGTIVEDEDYFLCLPPNTKFVLLAENE 76 (80)
T ss_pred EeEEcCCHHHHHHHHHHHhCCCCCCCceEEEEecCCcEEccHHHHhhCCCCcEEEEECCCC
Confidence 3345789999999999999997 23444 7799999977 78888888888888765
No 142
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=85.76 E-value=1.6 Score=31.86 Aligned_cols=54 Identities=30% Similarity=0.473 Sum_probs=42.1
Q ss_pred EEEccCcHHHHHHHHhhhcCCC-CCCc-ccccCCceeeE---eeeeecCCeEEEeecCC
Q 013471 389 VLWVPHNIEELIKLAVDKLDFP-DGHS-ILSEDGGKILD---VDMINDGQKLYLISETQ 442 (442)
Q Consensus 389 ~~~lp~~~~~ll~~~~~k~~~~-~~~~-~~~~~~~~i~~---i~~ird~d~~~~~~~~~ 442 (442)
.-..-.|++||+.-|.++|+.. .+.+ ++.+||-+||| .-.+-|+=.|.+++.+|
T Consensus 16 ~Gv~A~sL~eL~~K~~~~l~~~~~~~~lvL~eDGT~VddEeyF~tLp~nT~lm~L~~ge 74 (78)
T PF02017_consen 16 KGVAASSLEELLEKACDKLQLPEEPVRLVLEEDGTEVDDEEYFQTLPDNTVLMLLEKGE 74 (78)
T ss_dssp EEEEESSHHHHHHHHHHHHT-SSSTCEEEETTTTCBESSCHHHCCSSSSEEEEEEESSS
T ss_pred EeEEcCCHHHHHHHHHHHhCCCCcCcEEEEeCCCcEEccHHHHhhCCCCCEEEEECCCC
Confidence 3345689999999999999998 3444 46689999996 77888888888888765
No 143
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=84.52 E-value=2.1 Score=40.40 Aligned_cols=54 Identities=24% Similarity=0.391 Sum_probs=49.6
Q ss_pred hhhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 82 MPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 82 ~~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
...+++.-||+..+++.+.+++..|....++-++.++.|++..+.+|++..|..
T Consensus 121 ~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~ 174 (368)
T KOG1113|consen 121 EEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTF 174 (368)
T ss_pred HHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceE
Confidence 444567888999999999999999999999999999999999999999999886
No 144
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=82.08 E-value=3.5 Score=29.87 Aligned_cols=53 Identities=26% Similarity=0.454 Sum_probs=42.8
Q ss_pred EEccCcHHHHHHHHhhhcCCCC-CCcc-cccCCceeeE--eeeeecCCeEEEeecCC
Q 013471 390 LWVPHNIEELIKLAVDKLDFPD-GHSI-LSEDGGKILD--VDMINDGQKLYLISETQ 442 (442)
Q Consensus 390 ~~lp~~~~~ll~~~~~k~~~~~-~~~~-~~~~~~~i~~--i~~ird~d~~~~~~~~~ 442 (442)
-..-.|+++|+.=+.++|+.+. +.++ +.+||-+|++ ...+-|+=.|.+++.+|
T Consensus 17 GV~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGTeVtEeyF~tLp~nT~lmvL~~gq 73 (77)
T cd06535 17 GVAAKNLKELLRKGCRLLQLPCAGSRLCLYEDGTEVTEEYFPTLPDNTELVLLTPGQ 73 (77)
T ss_pred eEEcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEehHHHHhcCCCCcEEEEEcCCC
Confidence 3457899999999999999964 3444 8899999976 77888888888887665
No 145
>PF03607 DCX: Doublecortin; InterPro: IPR003533 X-linked lissencephaly is a severe brain malformation affecting males. Recently it has been demonstrated that the doublecortin gene is implicated in this disorder []. Doublecortin was found to bind to the microtubule cytoskeleton. In vivo and in vitro assays show that Doublecortin stabilises microtubules and causes bundling []. Doublecortin is a basic protein with an iso-electric point of 10, typical of microtubule-binding proteins. However, its sequence contains no known microtubule-binding domain(s). The detailed sequence analysis of Doublecortin and Doublecortin-like proteins allowed the identification of an evolutionarily conserved Doublecortin (DC) domain. This domain is found in the N terminus of proteins and consists of one or two tandemly repeated copies of an around 80 amino acids region. It has been suggested that the first DC domain of Doublecortin binds tubulin and enhances microtubule polymerisation []. Some proteins known to contain a DC domain are listed below: Doublecortin. It is required for neuronal migration []. A large number of point mutations in the human DCX gene leading to lissencephaly are located within the DC domains []. Human serine/threonine-protein kinase DCAMKL1. It is a probable kinase that may be involved in a calcium-signaling pathway controling neuronal migration in the developing brain []. Retinitis pigmentosa 1 protein. It could play a role in the differentiation of photoreceptor cells. Mutation in the human RP1 gene cause retinitis pigmentosa of type 1 []. ; GO: 0035556 intracellular signal transduction; PDB: 1UF0_A 1MG4_A 1MFW_A 2DNF_A 2XRP_I 2BQQ_A 1MJD_A.
Probab=81.62 E-value=1.9 Score=29.76 Aligned_cols=47 Identities=26% Similarity=0.582 Sum_probs=37.1
Q ss_pred CcHHHHHHHHhhhcCCCCC-CcccccCCceeeEeeeeecCCeEEEeecC
Q 013471 394 HNIEELIKLAVDKLDFPDG-HSILSEDGGKILDVDMINDGQKLYLISET 441 (442)
Q Consensus 394 ~~~~~ll~~~~~k~~~~~~-~~~~~~~~~~i~~i~~ird~d~~~~~~~~ 441 (442)
.+++.+++...++.+.+.+ .++.+.+|.+|.+++=++||+. |+..++
T Consensus 9 ~s~e~lL~~it~~v~l~~gVr~lyt~~G~~V~~l~~l~dg~~-yVa~g~ 56 (60)
T PF03607_consen 9 RSFEQLLDEITEKVQLPSGVRKLYTLDGKRVKSLDELEDGGS-YVASGR 56 (60)
T ss_dssp SSHHHHHHHHHHSSSSTTS-SEEEETTSSEESSGGGS-TTEE-EEEESS
T ss_pred cCHHHHHHHHHhhcCCCcccceEECCCCCEeCCHHHHCCCCE-EEEEcC
Confidence 5788999988888888644 6688999999999999999977 544443
No 146
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=70.53 E-value=7.4 Score=34.33 Aligned_cols=45 Identities=13% Similarity=0.302 Sum_probs=42.2
Q ss_pred ccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 91 FKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 91 f~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
=++.|++.+..+...+....|++++.++.+++..+.+|++.+|.+
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v 49 (211)
T PRK11753 5 GKPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSV 49 (211)
T ss_pred cCCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEE
Confidence 367899999999999999999999999999999999999999987
No 147
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=67.52 E-value=9.7 Score=38.56 Aligned_cols=54 Identities=22% Similarity=0.473 Sum_probs=49.3
Q ss_pred hhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeecccc
Q 013471 83 PYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLG 136 (442)
Q Consensus 83 ~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~~ 136 (442)
.++...|.|....++-+.++...+.-.||.+++.++..+...+.+|++.+|.+.
T Consensus 7 ~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~ve 60 (610)
T COG2905 7 QFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVE 60 (610)
T ss_pred HHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceee
Confidence 345678899999999999999999999999999999999999999999999883
No 148
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=53.16 E-value=23 Score=25.57 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=33.7
Q ss_pred CcHHHHHHHHhhhcCC----CCCCcccccCCceeeEeeeeecCCeEEEee
Q 013471 394 HNIEELIKLAVDKLDF----PDGHSILSEDGGKILDVDMINDGQKLYLIS 439 (442)
Q Consensus 394 ~~~~~ll~~~~~k~~~----~~~~~~~~~~~~~i~~i~~ird~d~~~~~~ 439 (442)
.++.++++.-.++++. ..+.-.+.-++.-+..=..++|||.+.|+.
T Consensus 26 ~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~~~~~l~~gD~v~i~p 75 (80)
T cd00754 26 ATVGELLDALEARYPGLLEELLARVRIAVNGEYVRLDTPLKDGDEVAIIP 75 (80)
T ss_pred CcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcCCCcccCCCCEEEEeC
Confidence 6899999887777654 233444556666666667899999999985
No 149
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=51.85 E-value=24 Score=31.67 Aligned_cols=51 Identities=14% Similarity=0.286 Sum_probs=43.3
Q ss_pred hhcccCccCCCHHHHHHHHHhccc-ccccCcceeeecCcccceeEEEeeccc
Q 013471 85 IEKVSLFKGCSSEFINQIVIRVHE-EFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 85 v~~~~lf~~~s~~~l~~lv~~~~~-e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
+...+.|-+.+++.+..+...... ..+++++.++.+|+....+|++.+|.+
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v 66 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTI 66 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceE
Confidence 455556667999999998877654 568999999999999999999999987
No 150
>cd00565 ThiS ThiaminS ubiquitin-like sulfur carrier protein. ThiS (ThiaminS) is a sulfur carrier protein involved in thiamin biosynthesis in bacteria. The ThiS fold, like those of two closely related proteins MoaD and Urm1, is similar to that of ubiquitin although there is little or no sequence similarity.
Probab=51.15 E-value=34 Score=23.76 Aligned_cols=42 Identities=14% Similarity=0.325 Sum_probs=25.6
Q ss_pred CcHHHHHHHHhhhcCCCCCCcccccCCceeeEe----eeeecCCeEEEee
Q 013471 394 HNIEELIKLAVDKLDFPDGHSILSEDGGKILDV----DMINDGQKLYLIS 439 (442)
Q Consensus 394 ~~~~~ll~~~~~k~~~~~~~~~~~~~~~~i~~i----~~ird~d~~~~~~ 439 (442)
.++.+|++. ++.....-.+..++.=+..- ..++|||.+-|+.
T Consensus 15 ~tv~~ll~~----l~~~~~~i~V~vNg~~v~~~~~~~~~L~~gD~V~ii~ 60 (65)
T cd00565 15 ATLAELLEE----LGLDPRGVAVALNGEIVPRSEWASTPLQDGDRIEIVT 60 (65)
T ss_pred CCHHHHHHH----cCCCCCcEEEEECCEEcCHHHcCceecCCCCEEEEEE
Confidence 368888853 44433322343444444444 6899999999875
No 151
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=47.00 E-value=18 Score=32.10 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=21.9
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCC
Q 013471 278 LSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 316 (442)
Q Consensus 278 l~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~ 316 (442)
+++|+..|..|....|+=.+|.+.|+.+.-+.|++.|+.
T Consensus 2 le~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 2 LEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 445555555555555555555555555555555555543
No 152
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=45.32 E-value=1.1 Score=45.09 Aligned_cols=157 Identities=14% Similarity=-0.002 Sum_probs=90.0
Q ss_pred cccchhhhhHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH-HcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 013471 154 IGKHEAELALRVNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLAT-SRGYEDITLFLIQKGVDINIKDKFGNTPLL 232 (442)
Q Consensus 154 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 232 (442)
+......+.++.+.+...|+...++........ .....++.++++ .....++. +-..+.+.+|
T Consensus 48 i~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~----~~g~~~~gl~~aml~a~~~~~------------~P~~~a~~~~ 111 (503)
T KOG0513|consen 48 INQGVSLAYLELRLQNIDGDPSAARLADYFDVS----IAGTNTGGLITAMLFAPNDCG------------RPRFGATDIL 111 (503)
T ss_pred hhhhhhhcccHHHHHhccCChHhhHhhhccCce----eeccCCchhhhhhhhcccccc------------Cccccccchh
Confidence 345555667788889888888877665433221 222334433333 22221111 2244556666
Q ss_pred HHHHcCCHHHHHHHHHcCCCCC--cCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHH
Q 013471 233 EAIKCGHDGVTSLLVKEGASLN--VDDAGSFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLL 310 (442)
Q Consensus 233 ~A~~~~~~~iv~~Ll~~g~~~~--~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~L 310 (442)
++...+. ...|+....+.+ ..+..++++..+.....+++..++.++.....++.+|.|+||.+...++. .+.+
T Consensus 112 ~~~~~~~---~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~--~~~i 186 (503)
T KOG0513|consen 112 WKFNLEK---APKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL--LVVI 186 (503)
T ss_pred hhhhhcC---CCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc--ceEE
Confidence 6554333 333444444444 23344667777777778887777777777777778899999999988776 2222
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 013471 311 LEAGASVFTKDRWGNTPLDEGRMCGNKN 338 (442)
Q Consensus 311 l~~ga~~~~~~~~g~tpl~~A~~~~~~~ 338 (442)
.-. +-++.+|+++.+..+...
T Consensus 187 ~~l-------dl~~~~P~lf~~~~~~~~ 207 (503)
T KOG0513|consen 187 PCL-------DLKSLTPNLFSIYDALGT 207 (503)
T ss_pred Eee-------ccCcCCceeeeeeccccc
Confidence 222 233366776666555444
No 153
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=41.02 E-value=24 Score=33.56 Aligned_cols=60 Identities=17% Similarity=0.395 Sum_probs=52.9
Q ss_pred HHHhhhhhhhcccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeecccc
Q 013471 77 SQTLYMPYIEKVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLG 136 (442)
Q Consensus 77 ~~~l~~~~v~~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~~ 136 (442)
..-+|.+.++++|+++....--...+...+...++.+++.++.++.....+|++-.|.+.
T Consensus 234 krkMy~~~l~s~pil~~l~k~er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvd 293 (368)
T KOG1113|consen 234 KRKMYEPFLESVPILESLEKLERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVD 293 (368)
T ss_pred hhhhhhhhhhcchhhHHHHHHHHHhhhcccceeeccCCceEEeccCCcceEEEecccccc
Confidence 578899999999998877766677788899999999999999999999999999998873
No 154
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=38.24 E-value=29 Score=34.82 Aligned_cols=162 Identities=17% Similarity=0.197 Sum_probs=88.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 013471 163 LRVNSAAYHGDLYQLKGLIRA-GADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDG 241 (442)
Q Consensus 163 t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~ 241 (442)
.....|...++.+.+..+++. ..-++.+...|.....+.-..|..+++-.+.. +-.+-+.+|...|+.+
T Consensus 266 ~~fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~----------D~~~rFeLAl~lg~L~ 335 (443)
T PF04053_consen 266 LEFKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT----------DPDHRFELALQLGNLD 335 (443)
T ss_dssp HHHHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS-----------HHHHHHHHHHCT-HH
T ss_pred HHHHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC----------ChHHHhHHHHhcCCHH
Confidence 346788999999887666652 22333444446667777777777777655542 1235677888888887
Q ss_pred HHHHHHHcCCCCCcCCCC-hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCC
Q 013471 242 VTSLLVKEGASLNVDDAG-SFLCTAVARGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTK 320 (442)
Q Consensus 242 iv~~Ll~~g~~~~~~~~~-~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~ 320 (442)
.+.-+.+.-.+ ...+ ..--.|...|+.++++...++..|. ...+.+....|+.+-++.|.+.-. .
T Consensus 336 ~A~~~a~~~~~---~~~W~~Lg~~AL~~g~~~lAe~c~~k~~d~-------~~L~lLy~~~g~~~~L~kl~~~a~----~ 401 (443)
T PF04053_consen 336 IALEIAKELDD---PEKWKQLGDEALRQGNIELAEECYQKAKDF-------SGLLLLYSSTGDREKLSKLAKIAE----E 401 (443)
T ss_dssp HHHHHCCCCST---HHHHHHHHHHHHHTTBHHHHHHHHHHCT-H-------HHHHHHHHHCT-HHHHHHHHHHHH----H
T ss_pred HHHHHHHhcCc---HHHHHHHHHHHHHcCCHHHHHHHHHhhcCc-------cccHHHHHHhCCHHHHHHHHHHHH----H
Confidence 77666543221 1111 2244567778888888887764332 234556667777777776664210 0
Q ss_pred CCCCCCHHHHHHHcCCH-HHHHHHHHcCC
Q 013471 321 DRWGNTPLDEGRMCGNK-NLIKLLEDAEC 348 (442)
Q Consensus 321 ~~~g~tpl~~A~~~~~~-~~v~~Ll~~~a 348 (442)
..+-+.+++.|...|+. ++++.|.+.|.
T Consensus 402 ~~~~n~af~~~~~lgd~~~cv~lL~~~~~ 430 (443)
T PF04053_consen 402 RGDINIAFQAALLLGDVEECVDLLIETGR 430 (443)
T ss_dssp TT-HHHHHHHHHHHT-HHHHHHHHHHTT-
T ss_pred ccCHHHHHHHHHHcCCHHHHHHHHHHcCC
Confidence 01123466667776664 67788877664
No 155
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=36.40 E-value=56 Score=28.27 Aligned_cols=49 Identities=22% Similarity=0.487 Sum_probs=41.5
Q ss_pred cccCccCCCHHHHHHHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 87 KVSLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 87 ~~~lf~~~s~~~l~~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
..++|..........+........+++++.++.+++....+|++.+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v 52 (214)
T COG0664 4 ENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIV 52 (214)
T ss_pred cccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEE
Confidence 4556666777777777777888889999999999999999999999987
No 156
>PRK06437 hypothetical protein; Provisional
Probab=35.86 E-value=65 Score=22.64 Aligned_cols=42 Identities=12% Similarity=0.391 Sum_probs=29.4
Q ss_pred CcHHHHHHHHhhhcCCCCCCcccccCCceeeEeeeeecCCeEEEee
Q 013471 394 HNIEELIKLAVDKLDFPDGHSILSEDGGKILDVDMINDGQKLYLIS 439 (442)
Q Consensus 394 ~~~~~ll~~~~~k~~~~~~~~~~~~~~~~i~~i~~ird~d~~~~~~ 439 (442)
-++.+|++ .+|.....-.+..+|.=+..=..++|||++=++.
T Consensus 21 ~tv~dLL~----~Lgi~~~~vaV~vNg~iv~~~~~L~dgD~Veiv~ 62 (67)
T PRK06437 21 LTVNDIIK----DLGLDEEEYVVIVNGSPVLEDHNVKKEDDVLILE 62 (67)
T ss_pred CcHHHHHH----HcCCCCccEEEEECCEECCCceEcCCCCEEEEEe
Confidence 46888884 4666444444556666666677899999998875
No 157
>PF14453 ThiS-like: ThiS-like ubiquitin
Probab=35.70 E-value=28 Score=23.75 Aligned_cols=28 Identities=18% Similarity=0.316 Sum_probs=22.4
Q ss_pred CcccccCCceeeEeeeeecCCeEEEeec
Q 013471 413 HSILSEDGGKILDVDMINDGQKLYLISE 440 (442)
Q Consensus 413 ~~~~~~~~~~i~~i~~ird~d~~~~~~~ 440 (442)
+-++--+|--+.+=..+.+||+||++.-
T Consensus 29 ~DI~I~NGF~~~~d~~L~e~D~v~~Ikk 56 (57)
T PF14453_consen 29 ADIVILNGFPTKEDIELKEGDEVFLIKK 56 (57)
T ss_pred CCEEEEcCcccCCccccCCCCEEEEEeC
Confidence 3455568888888888999999999864
No 158
>TIGR01683 thiS thiamine biosynthesis protein ThiS. This model represents ThiS, a small thiamine-biosynthesis protein related to MoaD, a molybdenum cofactor biosynthesis protein. Both proteins are involved in sulfur transfer. ThiS has a conserved Gly-Gly C-terminus that is modified, in reactions requiring ThiI, ThiF, IscS, and a sulfur atom from Cys, into the thiocarboxylate that provides the sulfur for thiazole biosynthesis.
Probab=35.20 E-value=97 Score=21.36 Aligned_cols=50 Identities=12% Similarity=0.328 Sum_probs=28.9
Q ss_pred CceEEEccC--cHHHHHHHHhhhcCCCCCCcccccCCceeeE----eeeeecCCeEEEee
Q 013471 386 HGIVLWVPH--NIEELIKLAVDKLDFPDGHSILSEDGGKILD----VDMINDGQKLYLIS 439 (442)
Q Consensus 386 ~~~~~~lp~--~~~~ll~~~~~k~~~~~~~~~~~~~~~~i~~----i~~ird~d~~~~~~ 439 (442)
+++.+.+|+ ++.++++ .++.....-.+..++.=|.. =..++|||.+-|+.
T Consensus 4 Ng~~~~~~~~~tv~~ll~----~l~~~~~~v~v~vN~~iv~~~~~~~~~L~~gD~veii~ 59 (64)
T TIGR01683 4 NGEPVEVEDGLTLAALLE----SLGLDPRRVAVAVNGEIVPRSEWDDTILKEGDRIEIVT 59 (64)
T ss_pred CCeEEEcCCCCcHHHHHH----HcCCCCCeEEEEECCEEcCHHHcCceecCCCCEEEEEE
Confidence 345555554 5788875 35554333334344433321 24799999998875
No 159
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=33.91 E-value=40 Score=24.38 Aligned_cols=28 Identities=32% Similarity=0.634 Sum_probs=25.1
Q ss_pred ccccCcceeeecCcccceeEEEeecccc
Q 013471 109 EFFLPGEVIMEQGNVVDQLYFVCHGVLG 136 (442)
Q Consensus 109 e~~~p~e~ii~~~~~~~~ly~i~~g~~~ 136 (442)
..+++++.++.+++....+|++.+|.+.
T Consensus 2 ~~~~~g~~i~~~g~~~~~~~~i~~G~v~ 29 (91)
T PF00027_consen 2 KTYKKGEVIYRQGDPCDHIYIILSGEVK 29 (91)
T ss_dssp EEESTTEEEEETTSBESEEEEEEESEEE
T ss_pred eEECCCCEEEeCCCcCCEEEEEEECceE
Confidence 3578999999999999999999999973
No 160
>PRK08364 sulfur carrier protein ThiS; Provisional
Probab=33.44 E-value=53 Score=23.27 Aligned_cols=42 Identities=19% Similarity=0.421 Sum_probs=29.6
Q ss_pred CcHHHHHHHHhhhcCCCCCCcccccCCceeeEeeeeecCCeEEEee
Q 013471 394 HNIEELIKLAVDKLDFPDGHSILSEDGGKILDVDMINDGQKLYLIS 439 (442)
Q Consensus 394 ~~~~~ll~~~~~k~~~~~~~~~~~~~~~~i~~i~~ird~d~~~~~~ 439 (442)
.++.++++ .++.......+..++.=+..=++++|||.+=++.
T Consensus 24 ~tv~~ll~----~l~~~~~~v~v~vNg~iv~~~~~l~~gD~Veii~ 65 (70)
T PRK08364 24 MKVADILR----AVGFNTESAIAKVNGKVALEDDPVKDGDYVEVIP 65 (70)
T ss_pred CcHHHHHH----HcCCCCccEEEEECCEECCCCcCcCCCCEEEEEc
Confidence 36888884 4566555555666666666677899999998875
No 161
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=33.26 E-value=12 Score=37.93 Aligned_cols=132 Identities=17% Similarity=-0.006 Sum_probs=81.4
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH-HHHcCCHHHHHHHHHcCCCCCcCCCChHHHHHHH
Q 013471 189 KTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE-AIKCGHDGVTSLLVKEGASLNVDDAGSFLCTAVA 267 (442)
Q Consensus 189 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~-A~~~~~~~iv~~Ll~~g~~~~~~~~~~~L~~A~~ 267 (442)
.....+.++.+++...|....++.....+.. .....++.+. |......++. ....+.+.++++..
T Consensus 50 ~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~----~~g~~~~gl~~aml~a~~~~~----------~P~~~a~~~~~~~~ 115 (503)
T KOG0513|consen 50 QGVSLAYLELRLQNIDGDPSAARLADYFDVS----IAGTNTGGLITAMLFAPNDCG----------RPRFGATDILWKFN 115 (503)
T ss_pred hhhhhcccHHHHHhccCChHhhHhhhccCce----eeccCCchhhhhhhhcccccc----------Cccccccchhhhhh
Confidence 3455678899999999999877776554332 2333344433 3332222111 11222233444333
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Q 013471 268 RGDSDFLKRVLSNGVDPSSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 337 (442)
Q Consensus 268 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 337 (442)
.+ ....|+....+.+..-.+..++++..+.....+++..++.++..-......|.|+||.+...++.
T Consensus 116 ~~---~~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~ 182 (503)
T KOG0513|consen 116 LE---KAPKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL 182 (503)
T ss_pred hc---CCCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc
Confidence 22 22334444444444445677889999999999998888887777677777899999999988777
No 162
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=32.83 E-value=11 Score=38.45 Aligned_cols=49 Identities=31% Similarity=0.409 Sum_probs=28.8
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 013471 169 AYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKG 217 (442)
Q Consensus 169 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 217 (442)
+..+....+-.|.+.++.++..|..|.||+|+++..|.+++.+.++...
T Consensus 404 ~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~ 452 (605)
T KOG3836|consen 404 ALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCK 452 (605)
T ss_pred hhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhh
Confidence 3333333444445556666666666666666666666666666666543
No 163
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=32.14 E-value=1.2e+02 Score=29.25 Aligned_cols=53 Identities=17% Similarity=0.376 Sum_probs=39.2
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhceeeEEeCCceEEEechHHHHHHHHhhhhhhhhhhcCcHHHHH
Q 013471 9 LPENLSILDIAGQIAFLVDIIMQFFLAYRDSQTYCLVYKLTRIALRYLKSSFIIDLLSCLPWDVIY 74 (442)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~d~~~~f~~~~~~~~~~~~v~~~~~i~~~y~~~~~~~d~~~~~p~~~~~ 74 (442)
.+.++|+++..+=++|-..+++.|+..=- + ..-.++-+ -++|+++.+|+-+..
T Consensus 251 f~dPFFiVEt~CIiWFtfEllvRf~aCPs---K-------~~Ff~nim---NiIDiVaI~PyFitl 303 (507)
T KOG1545|consen 251 FTDPFFIVETLCIIWFTFELLVRFFACPS---K-------ATFFRNIM---NIIDIVAIIPYFITL 303 (507)
T ss_pred cCCchHhHHHHHHHHHhHHHHHHHhcCcc---H-------HHHHHHHH---HHHHHHHHHHHHHHH
Confidence 35679999999999999999999987422 1 11233333 389999999987764
No 164
>TIGR01687 moaD_arch MoaD family protein, archaeal. Members of this family appear to be archaeal versions of MoaD, subunit 1 of molybdopterin converting factor. This model has been split from the bacterial/eukaryotic equivalog model TIGR01682 because the presence of two members of this family in a substantial number of archaeal species suggests that roles might not be interchangeable.
Probab=31.20 E-value=63 Score=23.89 Aligned_cols=46 Identities=11% Similarity=0.127 Sum_probs=31.0
Q ss_pred CcHHHHHHHHhhhcCCCC-----------CCcccccCCceeeEee--eeecCCeEEEee
Q 013471 394 HNIEELIKLAVDKLDFPD-----------GHSILSEDGGKILDVD--MINDGQKLYLIS 439 (442)
Q Consensus 394 ~~~~~ll~~~~~k~~~~~-----------~~~~~~~~~~~i~~i~--~ird~d~~~~~~ 439 (442)
.++.++++...++++... +.-.+.-++.-++.-+ .++|||.+.|+.
T Consensus 25 ~tv~~l~~~l~~~~p~~~~~~l~~~~~~~~~~~v~vN~~~v~~~~~~~l~dgdev~i~P 83 (88)
T TIGR01687 25 KTVGDLLNELMARYPKEFSELFKEGLGLVPNVIILVNGRNVDWGLGTELKDGDVVAIFP 83 (88)
T ss_pred CCHHHHHHHHHHHCcHHHHHhCccCCcccccEEEEECCEecCccCCCCCCCCCEEEEeC
Confidence 578999988877775311 1223445665555555 899999999875
No 165
>PLN03218 maturation of RBCL 1; Provisional
Probab=29.32 E-value=5e+02 Score=29.52 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=48.7
Q ss_pred HHHHHHHhcCCHHHHHHHHH----cCCCCCCCCCCCChHHHHHHHcCCHHHHHHH----HHcCCCCCCCCCCCCcHHHHH
Q 013471 163 LRVNSAAYHGDLYQLKGLIR----AGADPNKTDYDGRSPLHLATSRGYEDITLFL----IQKGVDINIKDKFGNTPLLEA 234 (442)
Q Consensus 163 t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L----l~~ga~~~~~~~~g~tpL~~A 234 (442)
+.+...++.|+.+-+..+.+ .|..++.. .-.+.+...++.|+.+-+..+ .+.|..|+... -.+.+...
T Consensus 584 aLI~ay~k~G~ldeA~elf~~M~e~gi~p~~~--tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~a~ 659 (1060)
T PLN03218 584 ALMKACANAGQVDRAKEVYQMIHEYNIKGTPE--VYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVDVA 659 (1060)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcCCCCChH--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHH
Confidence 34445555565554444432 23322211 112334444555554433332 33454444211 11333444
Q ss_pred HHcCCHH----HHHHHHHcCCCCCcCCCChHHHHHHHcCCHHHHHHHH
Q 013471 235 IKCGHDG----VTSLLVKEGASLNVDDAGSFLCTAVARGDSDFLKRVL 278 (442)
Q Consensus 235 ~~~~~~~----iv~~Ll~~g~~~~~~~~~~~L~~A~~~g~~~~v~~Ll 278 (442)
+..|+.+ +.+.+.+.|..++.....+.+...+..|..+-+..+.
T Consensus 660 ~k~G~~eeA~~l~~eM~k~G~~pd~~tynsLI~ay~k~G~~eeA~~lf 707 (1060)
T PLN03218 660 GHAGDLDKAFEILQDARKQGIKLGTVSYSSLMGACSNAKNWKKALELY 707 (1060)
T ss_pred HhCCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 5555543 3344444555555443444555556666665444443
No 166
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=27.38 E-value=60 Score=28.91 Aligned_cols=39 Identities=28% Similarity=0.376 Sum_probs=29.3
Q ss_pred HHHcCCCCCcCC--CChHHHHHHHcCCHHHHHHHHHCCCCC
Q 013471 246 LVKEGASLNVDD--AGSFLCTAVARGDSDFLKRVLSNGVDP 284 (442)
Q Consensus 246 Ll~~g~~~~~~~--~~~~L~~A~~~g~~~~v~~Ll~~g~~~ 284 (442)
|++.|+.-|.-+ ..|+=..|.+.++...-+.|++.|+..
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVPS 41 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCch
Confidence 356666666543 457888899999999999999988753
No 167
>COG4647 AcxC Acetone carboxylase, gamma subunit [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.20 E-value=46 Score=26.57 Aligned_cols=16 Identities=19% Similarity=0.430 Sum_probs=12.7
Q ss_pred eeeecCCeEEEeecCC
Q 013471 427 DMINDGQKLYLISETQ 442 (442)
Q Consensus 427 ~~ird~d~~~~~~~~~ 442 (442)
-++--|||||+.++.|
T Consensus 52 illpvg~hlfi~qs~~ 67 (165)
T COG4647 52 ILLPVGDHLFICQSAQ 67 (165)
T ss_pred eeeecCCcEEEEeccc
Confidence 3567799999999764
No 168
>PF07930 DAP_B: D-aminopeptidase, domain B; InterPro: IPR012856 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. D-aminopeptidase (Q9ZBA9 from SWISSPROT) is a dimeric enzyme with each monomer being composed of three domains. Domain B is organised to form a beta barrel made up of eight antiparallel beta strands. It is connected to domain A, the catalytic domain, by an eight-residue sequence, and also interacts with both domains A and C via non-covalent bonds. Domain B probably functions in maintaining domain C in a good position to interact with the catalytic domain []. This domain is found in peptidases that belong to MEROPS peptidase family S12 (D-Ala-D-Ala carboxypeptidase B family, clan ME).; GO: 0004177 aminopeptidase activity; PDB: 1EI5_A.
Probab=26.82 E-value=45 Score=24.69 Aligned_cols=27 Identities=19% Similarity=0.255 Sum_probs=20.7
Q ss_pred CcccccCCceeeEeeeeecCCeEEEee
Q 013471 413 HSILSEDGGKILDVDMINDGQKLYLIS 439 (442)
Q Consensus 413 ~~~~~~~~~~i~~i~~ird~d~~~~~~ 439 (442)
..+.+++-|+-....++||||.|-+.-
T Consensus 47 l~~~~~~~a~s~~~~~~rDGd~l~m~R 73 (88)
T PF07930_consen 47 LDLVSENEARSSGTVLRRDGDMLRMER 73 (88)
T ss_dssp EEEEETTEEE-SS-EEEEETTEEEEEE
T ss_pred eeccCCCcccCcceEEEEcCCeEEEee
Confidence 446778888888899999999998765
No 169
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.30 E-value=8.4e+02 Score=26.93 Aligned_cols=156 Identities=17% Similarity=0.176 Sum_probs=74.8
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 013471 165 VNSAAYHGDLYQLKGLIRAGADPNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTS 244 (442)
Q Consensus 165 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~iv~ 244 (442)
+-.|....+.+-|--|++++ +--|+.++-|--+.|.++++-..++ +..|-+-+|...|+.+++-
T Consensus 600 FKlALi~k~ydeVl~lI~ns------~LvGqaiIaYLqKkgypeiAL~FVk----------D~~tRF~LaLe~gnle~al 663 (1202)
T KOG0292|consen 600 FKLALLNKKYDEVLHLIKNS------NLVGQAIIAYLQKKGYPEIALHFVK----------DERTRFELALECGNLEVAL 663 (1202)
T ss_pred HHHHHHhhhhHHHHHHHHhc------CcccHHHHHHHHhcCCcceeeeeec----------CcchheeeehhcCCHHHHH
Confidence 44566666666555565543 1236666666666666665433332 1223444455555555443
Q ss_pred HHHHcCCCCCcCCCC-hHHHHHHHcCCHHHHHHHHHCCCCCCC----------------------CCCCCCcHHHHHHHh
Q 013471 245 LLVKEGASLNVDDAG-SFLCTAVARGDSDFLKRVLSNGVDPSS----------------------RDYDHRTPLHVAASE 301 (442)
Q Consensus 245 ~Ll~~g~~~~~~~~~-~~L~~A~~~g~~~~v~~Ll~~g~~~~~----------------------~~~~g~t~Lh~A~~~ 301 (442)
..-...-+. +-+ ..-..|...|+.++++...++--+.+. ...+-.+-++.|...
T Consensus 664 e~akkldd~---d~w~rLge~Al~qgn~~IaEm~yQ~~knfekLsfLYliTgn~eKL~Km~~iae~r~D~~~~~qnalYl 740 (1202)
T KOG0292|consen 664 EAAKKLDDK---DVWERLGEEALRQGNHQIAEMCYQRTKNFEKLSFLYLITGNLEKLSKMMKIAEIRNDATGQFQNALYL 740 (1202)
T ss_pred HHHHhcCcH---HHHHHHHHHHHHhcchHHHHHHHHHhhhhhheeEEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHHHHh
Confidence 332222111 111 112335556666666666554222111 001112233444444
Q ss_pred ChHH-HHHHHHHCCCCCCCCCCCCCCHHH--HHHHcCCHHHHHHHHHcCCC
Q 013471 302 GLYL-MAKLLLEAGASVFTKDRWGNTPLD--EGRMCGNKNLIKLLEDAECT 349 (442)
Q Consensus 302 g~~~-iv~~Ll~~ga~~~~~~~~g~tpl~--~A~~~~~~~~v~~Ll~~~a~ 349 (442)
|..+ -++.|. +-|+.||. .|+.+|..+..+-|.+.-.+
T Consensus 741 ~dv~ervkIl~----------n~g~~~laylta~~~G~~~~ae~l~ee~~~ 781 (1202)
T KOG0292|consen 741 GDVKERVKILE----------NGGQLPLAYLTAAAHGLEDQAEKLGEELEK 781 (1202)
T ss_pred ccHHHHHHHHH----------hcCcccHHHHHHhhcCcHHHHHHHHHhhcc
Confidence 4432 344333 33566666 46677878888888775544
No 170
>smart00537 DCX Domain in the Doublecortin (DCX) gene product. Tandemly-repeated domain in doublin, the Doublecortin gene product. Proposed to bind tubulin. Doublecortin (DCX) is mutated in human X-linked neuronal migration defects.
Probab=26.26 E-value=67 Score=24.10 Aligned_cols=43 Identities=28% Similarity=0.509 Sum_probs=32.9
Q ss_pred CcHHHHHHHHhh--hcCCC-CCCcccccCCceeeEeeeeecCCeEE
Q 013471 394 HNIEELIKLAVD--KLDFP-DGHSILSEDGGKILDVDMINDGQKLY 436 (442)
Q Consensus 394 ~~~~~ll~~~~~--k~~~~-~~~~~~~~~~~~i~~i~~ird~d~~~ 436 (442)
.+++.+++...+ +.... .-.++.+.+|.+|.+++=+.||+..+
T Consensus 31 ~s~d~lL~~lt~~v~l~~~~~Vr~lyt~~G~~v~~l~~l~~g~~yV 76 (89)
T smart00537 31 KSFEALLQDLTEVVKLDLPHGVRKLYTLDGKKVTSLDELEDGGSYV 76 (89)
T ss_pred CCHHHHHHHHhhhcccCCCCCeeEEEcCCCCEECCHHHhCcCCEEE
Confidence 578899988777 44333 23678889999999999999996544
No 171
>TIGR01682 moaD molybdopterin converting factor, subunit 1, non-archaeal. The C-terminal Gly-Gly of this model is critical to function.
Probab=25.04 E-value=93 Score=22.54 Aligned_cols=46 Identities=15% Similarity=0.257 Sum_probs=31.7
Q ss_pred CcHHHHHHHHhhhcCCCC---CCcccccCCceeeEeeeeecCCeEEEee
Q 013471 394 HNIEELIKLAVDKLDFPD---GHSILSEDGGKILDVDMINDGQKLYLIS 439 (442)
Q Consensus 394 ~~~~~ll~~~~~k~~~~~---~~~~~~~~~~~i~~i~~ird~d~~~~~~ 439 (442)
.++.+|++.-.++++.-. +.-.+.-++.-+++=..++|||.+-|+-
T Consensus 27 ~tv~~L~~~L~~~~p~l~~~~~~~~v~vn~~~v~~~~~l~dgDevai~P 75 (80)
T TIGR01682 27 TTVGELKEHLAKEGPELAASRGQVMVAVNEEYVTDDALLNEGDEVAFIP 75 (80)
T ss_pred cCHHHHHHHHHHhCchhhhhccceEEEECCEEcCCCcCcCCCCEEEEeC
Confidence 468888888877775211 1224556666666668999999999874
No 172
>cd00196 UBQ Ubiquitin-like proteins. Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins. Ubiquitin-mediated proteolysis is part of the regulated turnover of proteins required for controlling cell cycle progression. Other family members are protein modifiers that perform a wide range of functions. Ubiquitination usually results in a covalent bond between the C-terminus of ubiquitin and the epsilon-amino group of a substrate lysine. The three-step mechanism requires an activating enzyme (E1) that forms a thiol ester with the C-terminal carboxy group, a conjugating enzyme (E2) that transiently carries the activated ubiquitin molecule as a thiol ester, and a ligase (E3) that transfers the activated ubiquitin from the E2 to the substrate lysine residue. In poly-ubiquitination, ubiquitin itself is the substrate.
Probab=24.74 E-value=74 Score=20.45 Aligned_cols=47 Identities=23% Similarity=0.356 Sum_probs=33.5
Q ss_pred cCcHHHHHHHHhhhcCCCCCCcccccCCceeeEe-----eeeecCCeEEEee
Q 013471 393 PHNIEELIKLAVDKLDFPDGHSILSEDGGKILDV-----DMINDGQKLYLIS 439 (442)
Q Consensus 393 p~~~~~ll~~~~~k~~~~~~~~~~~~~~~~i~~i-----~~ird~d~~~~~~ 439 (442)
..++.++++...+++|.....-.+..++....+- ..+++|+.+.++.
T Consensus 17 ~~tv~~l~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 68 (69)
T cd00196 17 GTTVADLKEKLAKKLGLPPEQQRLLVNGKILPDSLTLEDYGLQDGDELVLVP 68 (69)
T ss_pred CCcHHHHHHHHHHHHCcChHHeEEEECCeECCCCCcHHHcCCCCCCEEEEEe
Confidence 5789999999999998654433455556555543 3678899888764
No 173
>COG0490 Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels [Inorganic ion transport and metabolism]
Probab=23.73 E-value=43 Score=28.18 Aligned_cols=14 Identities=29% Similarity=0.603 Sum_probs=12.5
Q ss_pred eeeecCCeEEEeec
Q 013471 427 DMINDGQKLYLISE 440 (442)
Q Consensus 427 ~~ird~d~~~~~~~ 440 (442)
+||+.||+|+++.+
T Consensus 133 ~vle~gDtlvviG~ 146 (162)
T COG0490 133 TVLEAGDTLVVIGE 146 (162)
T ss_pred hhhcCCCEEEEEec
Confidence 78999999999974
No 174
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=22.49 E-value=68 Score=28.66 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=30.0
Q ss_pred HHHHhcccccccCcceeeecCcccceeEEEeeccc
Q 013471 101 QIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVL 135 (442)
Q Consensus 101 ~lv~~~~~e~~~p~e~ii~~~~~~~~ly~i~~g~~ 135 (442)
.+........+++++.++.+|+....+|++.+|.+
T Consensus 26 ~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v 60 (226)
T PRK10402 26 DVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRA 60 (226)
T ss_pred HHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEE
Confidence 35555666778999999999999999999999987
No 175
>PF02597 ThiS: ThiS family; InterPro: IPR003749 ThiS (thiaminS) is a 66 aa protein involved in sulphur transfer. ThiS is coded in the thiCEFSGH operon in Escherichia coli. This family of proteins have two conserved Glycines at the COOH terminus. Thiocarboxylate is formed at the last G in the activation process. Sulphur is transferred from ThiI to ThiS in a reaction catalysed by IscS []. MoaD, a protein involved in sulphur transfer during molybdopterin synthesis, is about the same length and shows limited sequence similarity to ThiS. Both have the conserved GG at the COOH end.; PDB: 1JW9_D 1JWB_D 1JWA_D 3BII_D 1NVI_D 1FMA_D 1FM0_D 2QIE_G 2Q5W_D 2K5P_A ....
Probab=21.93 E-value=90 Score=22.12 Aligned_cols=47 Identities=11% Similarity=0.267 Sum_probs=35.3
Q ss_pred cCcHHHHHHHHhhhcCCC--CCCcccccCCceeeE---eeeeecCCeEEEee
Q 013471 393 PHNIEELIKLAVDKLDFP--DGHSILSEDGGKILD---VDMINDGQKLYLIS 439 (442)
Q Consensus 393 p~~~~~ll~~~~~k~~~~--~~~~~~~~~~~~i~~---i~~ird~d~~~~~~ 439 (442)
+.++.++++.-.++++.- ...-.+.-++.-+++ =..++|||.+.|+.
T Consensus 21 ~~tv~~ll~~l~~~~p~~~~~~~~~v~vN~~~v~~~~~~~~l~~gD~V~i~p 72 (77)
T PF02597_consen 21 GSTVRDLLEALAERYPELALRDRVAVAVNGEIVPDDGLDTPLKDGDEVAILP 72 (77)
T ss_dssp TSBHHHHHHHHCHHTGGGHTTTTEEEEETTEEEGGGTTTSBEETTEEEEEEE
T ss_pred CCcHHHHHHHHHhhccccccCccEEEEECCEEcCCccCCcCcCCCCEEEEEC
Confidence 568999999888777531 123456677777777 78999999999985
No 176
>PLN03218 maturation of RBCL 1; Provisional
Probab=21.63 E-value=6e+02 Score=28.91 Aligned_cols=13 Identities=15% Similarity=0.202 Sum_probs=6.7
Q ss_pred HHHHHHHcCCHHH
Q 013471 327 PLDEGRMCGNKNL 339 (442)
Q Consensus 327 pl~~A~~~~~~~~ 339 (442)
-+...+..|+.+-
T Consensus 655 LI~a~~k~G~~ee 667 (1060)
T PLN03218 655 LVDVAGHAGDLDK 667 (1060)
T ss_pred HHHHHHhCCCHHH
Confidence 3445555666543
No 177
>PF04017 DUF366: Domain of unknown function (DUF366); InterPro: IPR007162 This is an archaeal family of unknown function.; PDB: 2DDZ_E.
Probab=21.00 E-value=62 Score=27.73 Aligned_cols=13 Identities=31% Similarity=0.744 Sum_probs=9.9
Q ss_pred EeeeeecCCeEEE
Q 013471 425 DVDMINDGQKLYL 437 (442)
Q Consensus 425 ~i~~ird~d~~~~ 437 (442)
.+.+.|+||.||+
T Consensus 99 gv~~~R~GDDLy~ 111 (183)
T PF04017_consen 99 GVKLRREGDDLYV 111 (183)
T ss_dssp T--EEEETTEEEE
T ss_pred CCceeecccceeE
Confidence 4678999999997
No 178
>PF02080 TrkA_C: TrkA-C domain; InterPro: IPR006037 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the C-terminal subdomain of RCK.; GO: 0008324 cation transmembrane transporter activity, 0006813 potassium ion transport; PDB: 2BKP_A 1VCT_A 2BKO_A 2BKN_A 3L4B_C 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A ....
Probab=20.64 E-value=57 Score=22.70 Aligned_cols=15 Identities=13% Similarity=0.414 Sum_probs=11.1
Q ss_pred eeeeecCCeEEEeec
Q 013471 426 VDMINDGQKLYLISE 440 (442)
Q Consensus 426 i~~ird~d~~~~~~~ 440 (442)
=++|+.||+|+++.+
T Consensus 45 ~~~l~~gD~l~v~g~ 59 (71)
T PF02080_consen 45 DTVLQAGDILIVVGD 59 (71)
T ss_dssp T-BE-TTEEEEEEEE
T ss_pred CCEECCCCEEEEEEC
Confidence 578999999999864
No 179
>PRK08053 sulfur carrier protein ThiS; Provisional
Probab=20.61 E-value=2.8e+02 Score=19.21 Aligned_cols=48 Identities=15% Similarity=0.261 Sum_probs=28.1
Q ss_pred ceEEEccC--cHHHHHHHHhhhcCCCCCCcccccCCceee-----EeeeeecCCeEEEee
Q 013471 387 GIVLWVPH--NIEELIKLAVDKLDFPDGHSILSEDGGKIL-----DVDMINDGQKLYLIS 439 (442)
Q Consensus 387 ~~~~~lp~--~~~~ll~~~~~k~~~~~~~~~~~~~~~~i~-----~i~~ird~d~~~~~~ 439 (442)
++.+.+++ ++.+|++. ++...+ .+.-+=+.+|- +=..++|||.+-|+.
T Consensus 7 g~~~~~~~~~tl~~ll~~----l~~~~~-~vaVavN~~iv~r~~w~~~~L~~gD~Ieii~ 61 (66)
T PRK08053 7 DQPMQCAAGQTVHELLEQ----LNQLQP-GAALAINQQIIPREQWAQHIVQDGDQILLFQ 61 (66)
T ss_pred CeEEEcCCCCCHHHHHHH----cCCCCC-cEEEEECCEEeChHHcCccccCCCCEEEEEE
Confidence 44444443 68888853 444332 24334444552 234799999999886
Done!