Your job contains 1 sequence.
>013475
MDLLCNAYSNTSDDEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLHRPNQQHSG
LRTEASVAGRYMSKRERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLL
RHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQ
KLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFH
PENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFVSSSDVSGSNM
SENSIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLD
KFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVA
FHPILPNIIGSCSWNGDVSVYE
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013475
(442 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2172084 - symbol:AT5G54520 "AT5G54520" species... 1316 2.6e-134 1
MGI|MGI:3045255 - symbol:Wdr25 "WD repeat domain 25" spec... 629 1.6e-61 1
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 471 9.1e-45 1
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 401 4.1e-41 2
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 426 5.3e-40 1
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 391 2.7e-38 2
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 380 7.6e-35 1
RGD|1307063 - symbol:Cdc40 "cell division cycle 40" speci... 372 2.8e-34 1
UNIPROTKB|F1LMQ0 - symbol:Cdc40 "Protein Cdc40" species:1... 372 2.8e-34 1
UNIPROTKB|F1MBS9 - symbol:CDC40 "Uncharacterized protein"... 372 6.2e-34 1
UNIPROTKB|F1RSY9 - symbol:CDC40 "Uncharacterized protein"... 372 6.2e-34 1
MGI|MGI:1918963 - symbol:Cdc40 "cell division cycle 40" s... 372 6.2e-34 1
UNIPROTKB|E2RSW2 - symbol:CDC40 "Uncharacterized protein"... 372 1.3e-33 1
UNIPROTKB|O60508 - symbol:CDC40 "Pre-mRNA-processing fact... 368 1.8e-33 1
WB|WBGene00018625 - symbol:prp-17 species:6239 "Caenorhab... 350 1.7e-31 1
GENEDB_PFALCIPARUM|PFL0970w - symbol:PFL0970w "pre-mRNA s... 350 2.6e-31 1
UNIPROTKB|Q8I5L1 - symbol:PFL0970w "Pre-mRNA splicing fac... 350 2.6e-31 1
UNIPROTKB|G4MYQ9 - symbol:MGG_08133 "Pre-mRNA-processing ... 337 3.7e-30 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 334 9.4e-30 1
ASPGD|ASPL0000032184 - symbol:AN5196 species:162425 "Emer... 297 4.5e-25 2
CGD|CAL0001327 - symbol:orf19.6347 species:5476 "Candida ... 301 5.6e-25 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 281 1.7e-24 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 277 5.0e-24 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 277 5.0e-24 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 277 5.0e-24 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 277 5.0e-24 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 277 5.0e-24 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 277 5.0e-24 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 275 8.6e-24 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 268 5.6e-23 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 247 1.4e-20 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 246 1.8e-20 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 244 5.9e-20 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 253 7.2e-20 1
SGD|S000002772 - symbol:CDC40 "Pre-mRNA splicing factor" ... 253 1.3e-19 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 240 4.1e-18 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 240 4.1e-18 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 236 5.3e-18 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 213 5.6e-15 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 213 5.7e-15 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 211 9.6e-15 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 211 9.6e-15 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 210 1.3e-14 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 207 3.9e-14 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 205 4.3e-14 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 205 8.2e-14 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 203 8.5e-14 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 194 1.9e-12 1
GENEDB_PFALCIPARUM|MAL8P1.43 - symbol:MAL8P1.43 "u5 snrnp... 137 3.3e-12 2
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 186 7.7e-12 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 184 1.2e-11 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 186 1.4e-11 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 182 1.5e-11 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 186 1.7e-11 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 176 2.1e-11 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 184 3.0e-11 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 190 3.0e-11 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 181 5.4e-11 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 180 6.9e-11 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 179 1.0e-10 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 177 1.5e-10 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 177 1.7e-10 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 176 2.2e-10 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 172 2.3e-10 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 175 2.5e-10 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 175 2.5e-10 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 175 2.5e-10 1
RGD|1310631 - symbol:Atg16l1 "autophagy related 16-like 1... 177 2.6e-10 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 151 2.8e-10 2
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 171 3.2e-10 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 137 3.3e-10 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 172 3.4e-10 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 173 4.1e-10 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 172 4.4e-10 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 170 5.4e-10 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 171 8.0e-10 1
FB|FBgn0263933 - symbol:ebi "ebi" species:7227 "Drosophil... 173 9.2e-10 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 169 9.4e-10 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 169 9.5e-10 1
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 170 1.2e-09 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 125 1.2e-09 2
ZFIN|ZDB-GENE-030131-6176 - symbol:mlst8 "MTOR associated... 165 1.5e-09 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 169 1.6e-09 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 166 1.6e-09 1
UNIPROTKB|B8ZZF2 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 167 1.8e-09 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 166 2.1e-09 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 167 2.2e-09 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 167 2.2e-09 1
UNIPROTKB|E1BYR9 - symbol:ATG16L1 "Uncharacterized protei... 132 2.3e-09 2
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 120 2.3e-09 2
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 166 3.3e-09 1
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 166 3.3e-09 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 166 3.3e-09 1
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 166 3.3e-09 1
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 166 3.3e-09 1
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 166 3.4e-09 1
UNIPROTKB|Q676U5 - symbol:ATG16L1 "Autophagy-related prot... 140 6.5e-09 2
UNIPROTKB|F1NAZ4 - symbol:MLST8 "Uncharacterized protein"... 159 7.3e-09 1
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 163 8.7e-09 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 162 9.6e-09 1
WARNING: Descriptions of 523 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2172084 [details] [associations]
symbol:AT5G54520 "AT5G54520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 IPI:IPI00547624 RefSeq:NP_200263.2
UniGene:At.29492 ProteinModelPortal:F4K0D3 SMR:F4K0D3 PRIDE:F4K0D3
EnsemblPlants:AT5G54520.1 GeneID:835540 KEGG:ath:AT5G54520
OMA:PPFKLNK Uniprot:F4K0D3
Length = 457
Score = 1316 (468.3 bits), Expect = 2.6e-134, P = 2.6e-134
Identities = 251/463 (54%), Positives = 329/463 (71%)
Query: 1 MDLLCNAYSNTSDDEPEPASKHEPELRSIFSP--PSKRPRPDYPYPQTKPH-PLHRPNQQ 57
MDL+CN+Y+N SDDEPEP + + +P PSKRP YP P+ + + P RP
Sbjct: 1 MDLICNSYANDSDDEPEPVTNERLTSKIAAAPSIPSKRP---YPVPEERQYKPPRRPYPP 57
Query: 58 H---SGLRTEAS----------VAGRYMSKRERALLGPGIPAATDPKPDPSAVVA----- 99
H S +T +S V GRY+SKRER+LL +T P PD S+ ++
Sbjct: 58 HGSYSESQTSSSFSIPVPVPVPVPGRYVSKRERSLLAS---LSTIPTPDQSSDLSQKPYS 114
Query: 100 AAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAH 159
+ VLGSISD+ + + +LS +RH PK ++++P R+S +L HTKAV +I+WS +H H
Sbjct: 115 SPTVLGSISDSDVPRHVLSSVRHRPKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVH 174
Query: 160 LLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDV 219
LLASAG+D ++ +WNVWS D+K R H+A V DVKWS+QGL +LSCGYDC+SRL DV
Sbjct: 175 LLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDV 234
Query: 220 EKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILD 279
E+G+ETQSF+E+ V VVKFHP+N N+FLSGGSKG LRLWDIR K HEY++ LGPILD
Sbjct: 235 ERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILD 294
Query: 280 VEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYF 339
VEF GKQF ++VWD+SREVPLS QVYVEAYTCPC++ HP DP F
Sbjct: 295 VEFIAGGKQFISSSDVSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVF 354
Query: 340 VAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYN 399
+AQS+GNY AIFS+ PPF+L+K+KR+E H V+GFPIKC+FS DGE L SGSSDGS+Y Y+
Sbjct: 355 IAQSHGNYTAIFSTNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYD 414
Query: 400 CRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSVYE 442
+S+ L +K+KAYEQ C++V++HP+LPN++ +CSWNG VSV+E
Sbjct: 415 YKSTALIKKLKAYEQPCVNVSYHPVLPNVVAACSWNGQVSVFE 457
>MGI|MGI:3045255 [details] [associations]
symbol:Wdr25 "WD repeat domain 25" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:3045255 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AC140111 GeneTree:ENSGT00530000063583
EMBL:AK081117 EMBL:AC122811 IPI:IPI00757781 IPI:IPI00989348
RefSeq:NP_808270.2 UniGene:Mm.342082 ProteinModelPortal:E9Q349
SMR:E9Q349 PRIDE:E9Q349 Ensembl:ENSMUST00000047115
Ensembl:ENSMUST00000167816 GeneID:212198 KEGG:mmu:212198 CTD:79446
eggNOG:NOG301329 HOGENOM:HOG000007841 HOVERGEN:HBG069845
OMA:YSVGCEC NextBio:373502 Bgee:E9Q349 Uniprot:E9Q349
Length = 535
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 129/376 (34%), Positives = 203/376 (53%)
Query: 71 YMSKRERAL--LGPGIPAATDPKPD-PSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSH 127
Y+ KR R L L P D +P P A A A + + + + Q L+ S
Sbjct: 167 YIPKRLRQLQALNPEAGGGKDGEPPGPPAGCAPAPLCVAPTVSEFIQPYLN-------SQ 219
Query: 128 VRRSKIPGRLSTALCHHTKAVNSINWSPTH--AHLLASAGMDQSICIWNVWSRDQKLARV 185
R + +P ++ L H VNSI W P +H+L SA MD++ +WN L +
Sbjct: 220 YRETTVPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCL-QT 278
Query: 186 LNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSN 245
+ HS AV +WS G +LS G+D + L D+E G + S + + V +KFHP++ N
Sbjct: 279 YSVHSEAVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVTTLKFHPKDHN 338
Query: 246 LFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXI 305
+FL GG ++ WD+RTGKV Y ++ LD+ F G +F I
Sbjct: 339 VFLCGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTI 398
Query: 306 VVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRY 365
+ WD +S Q++ E YTCP + HP +P F+AQ+NGNY+A+FSS P+R+ + +RY
Sbjct: 399 IAWDFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRY 458
Query: 366 ESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPIL 425
E H V G+ + C S G+ LV+GS+DG + ++ R++ ++ + QAC+ +HP+L
Sbjct: 459 EGHKVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVL 518
Query: 426 PNIIGSCSWNGDVSVY 441
P+++G+CSW GD+ ++
Sbjct: 519 PSVLGTCSWGGDIKIW 534
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 102/312 (32%), Positives = 165/312 (52%)
Query: 133 IPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA 192
+P +L HTK V +I + P + HLL SAGMD ++ IW+ + D++ + HS A
Sbjct: 292 VPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYG-DRRCIQTYMGHSQA 350
Query: 193 VNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNL--FLSG 250
V D+ +S G LSCGYD +RL D E G SF +KF+P++ FL G
Sbjct: 351 VRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYCIKFNPDDDKQEQFLCG 410
Query: 251 GSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDV 310
GS + WDI++ ++ EY Q LG + + F + ++F + VWD
Sbjct: 411 GSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKS-------LRVWDW 463
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGV 370
V + ++ P V HP +F AQS N I I+S+ FR++K KR+ H V
Sbjct: 464 GIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNV 523
Query: 371 SGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIG 430
SG+ + FS DG+ + SG S G +F++ ++S++ + I A+ CI + + P+ P+ +
Sbjct: 524 SGYACQLGFSPDGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLEPSKVA 583
Query: 431 SCSWNGDVSVYE 442
+CSWN ++ +++
Sbjct: 584 TCSWNNEIKLWD 595
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 401 (146.2 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 89/301 (29%), Positives = 148/301 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H K ++SI W P AHLL S MD + +W V+ +++ R + H A+ D+ W+ +G
Sbjct: 284 HNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYG-ERRCIRTFSGHRQAIKDIAWNNRGT 342
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKFHP+NS +LF++G S + WD
Sbjct: 343 NFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWDT 402
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G + EY + LG + + F + ++F I WD+ V +
Sbjct: 403 RSGDIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMR-----IWEWDIP--VDMKYIAD 455
Query: 322 VEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSL 381
++ P V P + QS N I IFS+ F++++ K + H VSG+ + FS
Sbjct: 456 PTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSP 515
Query: 382 DGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSVY 441
D LVSG DG Y ++ +++++ +K +A++ CI +HP + + + W+G + +
Sbjct: 516 DMSYLVSGDGDGKCYIWDWKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWDGQIKYW 575
Query: 442 E 442
+
Sbjct: 576 D 576
Score = 52 (23.4 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 7 AYSNTSDDEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLHR 53
+Y+++SD+E + A + + S PS P PD+ P K H L +
Sbjct: 6 SYASSSDEESDHA---DAATATTNSEPSA-PIPDHLLPVDKTHSLSK 48
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 98/312 (31%), Positives = 159/312 (50%)
Query: 133 IPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA 192
IP RL HTK V++I + P HLL SAGMD + IW+V++ K R H+ A
Sbjct: 270 IPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSG-KCMRTYMGHAKA 328
Query: 193 VNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSG 250
V D+ +S G L+ GYD + + D E G +F VVK +P++ N+ L+G
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 388
Query: 251 GSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDV 310
S + WDI TG+V EY Q LG + + F N ++F + VW+
Sbjct: 389 MSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKS-------LRVWEF 441
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGV 370
V + ++ P + HP + AQS N I I+S+ F+L+K KR+ H V
Sbjct: 442 GIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 501
Query: 371 SGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIG 430
+G+ + +FS DG ++SG +G +F++ +S ++ R +K + CI +HP+ + +
Sbjct: 502 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVA 561
Query: 431 SCSWNGDVSVYE 442
+C W+G + ++
Sbjct: 562 TCGWDGLIKYWD 573
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 391 (142.7 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 104/347 (29%), Positives = 170/347 (48%)
Query: 107 ISDAYLRQDILSLLRHLPKS---HVRRSKIPGR--LSTALCH----HTKAVNSINWSPTH 157
I DAY Q S L H+P+ ++R + IP + L H HTK V++I P
Sbjct: 242 IKDAYDYQG-RSYL-HIPQDVGINLRSADIPDKCYLPKKQLHVWTGHTKGVSAIRLFPKS 299
Query: 158 AHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLV 217
HLL S MD I +W V++ +++ R HS AV DV ++ G LS YD +L
Sbjct: 300 GHLLLSCSMDCKIKLWEVYN-ERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLW 358
Query: 218 DVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDIRTGKVAHEYIQSLG 275
D E G F VKF+P+ NL ++G S + WDIR+G+V EY + LG
Sbjct: 359 DSETGQCISRFTNRKVPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLG 418
Query: 276 PILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPF 335
+ + F ++F + WD+ + + + ++ P V P
Sbjct: 419 AVNTITFVDENRRFVSTSDDKSLR-----VWEWDIPADFKYIAEPSM--HSMPAVTLSPN 471
Query: 336 DPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSI 395
+ QS N I IF + FRL+K K ++ H V+G+ + FS D +VSG +DG +
Sbjct: 472 GKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKL 531
Query: 396 YFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSVYE 442
++ ++++L +IKA+++ CI +HP + + +C W+G + +++
Sbjct: 532 NIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD 578
Score = 38 (18.4 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 14/50 (28%), Positives = 19/50 (38%)
Query: 73 SKRERALLGPGIPAATDP------KPDPSAVVAAAQVLGSISDAYLRQDI 116
S E P P DP KP S V VL S + +++D+
Sbjct: 15 SDSENESESPNNPQEIDPDALVHLKPLKSGGVTTVAVLNSAPEVAVKEDV 64
Score = 37 (18.1 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 7 AYSNTSDDEPEPASKHEPE 25
+Y + SD E E S + P+
Sbjct: 10 SYGSDSDSENESESPNNPQ 28
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 380 (138.8 bits), Expect = 7.6e-35, P = 7.6e-35
Identities = 98/362 (27%), Positives = 175/362 (48%)
Query: 89 DPKP-DPSAVVAAAQVLGSISDAYLR--QDI-LSLLRHLPKSHVRRSKIPGRLSTALCHH 144
D KP + ++ ++ +YL QD+ ++L +P + +P + H
Sbjct: 232 DDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTMPPE---KCYLPKKQIHVWSGH 288
Query: 145 TKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLF 204
TK V+++ P H+L S MD I +W V+ D++ R H AV D+ ++ G
Sbjct: 289 TKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYG-DRRCLRTFIGHGKAVRDICFNNAGTR 347
Query: 205 VLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDIR 262
LS YD +L D E G F VKF+P+ NLF++G S + WDIR
Sbjct: 348 FLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIR 407
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 408 SGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYIA 458
Query: 323 EA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFS 380
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + FS
Sbjct: 459 EPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFS 518
Query: 381 LDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSV 440
D ++SG +DG + ++ ++++L +IKA+++ CI +HP + + +C W+G + +
Sbjct: 519 PDMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGWDGLIKL 578
Query: 441 YE 442
++
Sbjct: 579 WD 580
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 88/303 (29%), Positives = 151/303 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK V+++ P HLL S MD I +W V+ D++ R HS AV D+ ++ G
Sbjct: 152 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG-DRRCLRTFIGHSKAVRDICFNTAGT 210
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKF+P+ NLF++G S + WDI
Sbjct: 211 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 270
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 271 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYI 321
Query: 322 VEA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + F
Sbjct: 322 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 381
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVS 439
S D ++SG +G + ++ ++++L + KA+++ CI +HP + + +C W+G +
Sbjct: 382 SPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 441
Query: 440 VYE 442
+++
Sbjct: 442 LWD 444
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 88/303 (29%), Positives = 151/303 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK V+++ P HLL S MD I +W V+ D++ R HS AV D+ ++ G
Sbjct: 155 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG-DRRCLRTFIGHSKAVRDICFNTAGT 213
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKF+P+ NLF++G S + WDI
Sbjct: 214 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 273
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 274 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYI 324
Query: 322 VEA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + F
Sbjct: 325 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 384
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVS 439
S D ++SG +G + ++ ++++L + KA+++ CI +HP + + +C W+G +
Sbjct: 385 SPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 444
Query: 440 VYE 442
+++
Sbjct: 445 LWD 447
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 372 (136.0 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 88/303 (29%), Positives = 151/303 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK V+++ P HLL S MD I +W V+ D++ R HS AV D+ ++ G
Sbjct: 287 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG-DRRCLRTFIGHSKAVRDICFNTAGT 345
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKF+P+ NLF++G S + WDI
Sbjct: 346 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 405
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 406 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYI 456
Query: 322 VEA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + F
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 516
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVS 439
S D ++SG +G + ++ ++++L + KA+++ CI +HP + + +C W+G +
Sbjct: 517 SPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 576
Query: 440 VYE 442
+++
Sbjct: 577 LWD 579
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 372 (136.0 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 88/303 (29%), Positives = 151/303 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK V+++ P HLL S MD I +W V+ D++ R HS AV D+ ++ G
Sbjct: 287 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG-DRRCLRTFIGHSKAVRDICFNTAGT 345
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKF+P+ NLF++G S + WDI
Sbjct: 346 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 405
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 406 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYI 456
Query: 322 VEA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + F
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 516
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVS 439
S D ++SG +G + ++ ++++L + KA+++ CI +HP + + +C W+G +
Sbjct: 517 SPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 576
Query: 440 VYE 442
+++
Sbjct: 577 LWD 579
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 372 (136.0 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 88/303 (29%), Positives = 151/303 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK V+++ P HLL S MD I +W V+ D++ R HS AV D+ ++ G
Sbjct: 287 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG-DRRCLRTFIGHSKAVRDICFNTAGT 345
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKF+P+ NLF++G S + WDI
Sbjct: 346 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 405
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 406 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYI 456
Query: 322 VEA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + F
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 516
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVS 439
S D ++SG +G + ++ ++++L + KA+++ CI +HP + + +C W+G +
Sbjct: 517 SPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 576
Query: 440 VYE 442
+++
Sbjct: 577 LWD 579
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 372 (136.0 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 88/303 (29%), Positives = 151/303 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK V+++ P HLL S MD I +W V+ D++ R HS AV D+ ++ G
Sbjct: 371 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG-DRRCLRTFIGHSKAVRDICFNTAGT 429
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKF+P+ NLF++G S + WDI
Sbjct: 430 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 489
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 490 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYI 540
Query: 322 VEA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + F
Sbjct: 541 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 600
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVS 439
S D ++SG +G + ++ ++++L + KA+++ CI +HP + + +C W+G +
Sbjct: 601 SPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 660
Query: 440 VYE 442
+++
Sbjct: 661 LWD 663
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 368 (134.6 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 87/303 (28%), Positives = 151/303 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK V+++ P HLL S MD I +W V+ +++ R HS AV D+ ++ G
Sbjct: 287 HTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYG-ERRCLRTFIGHSKAVRDICFNTAGT 345
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS--NLFLSGGSKGLLRLWDI 261
LS YD +L D E G F VKF+P+ NLF++G S + WDI
Sbjct: 346 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 405
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+G++ EY + LG + + F ++F + VW+ ++P+ +
Sbjct: 406 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKS-------LRVWEW--DIPVDFKYI 456
Query: 322 VEA--YTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
E ++ P V P + QS N I IF + FRL+K K ++ H V+G+ + F
Sbjct: 457 AEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDF 516
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVS 439
S D ++SG +G + ++ ++++L + KA+++ CI +HP + + +C W+G +
Sbjct: 517 SPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIK 576
Query: 440 VYE 442
+++
Sbjct: 577 LWD 579
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 350 (128.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 87/324 (26%), Positives = 149/324 (45%)
Query: 122 HLPKSHV-RRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQ 180
+L + +V R +P +L H K VN + W P AHL S MD I +W V+ R Q
Sbjct: 251 NLREDYVPERCFVPKKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDR-Q 309
Query: 181 KLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFH 240
++ R H V +V ++ +G LS +D +L D E G Q F +K+H
Sbjct: 310 RVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHTGHVPYCLKYH 369
Query: 241 PEN--SNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXX 298
P++ +++FL G + WD R+G++ EY + L + + F ++F
Sbjct: 370 PDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSV 429
Query: 299 XXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPP-F 357
I W++ + L + V + A P + P D + V Q N I +F
Sbjct: 430 R-----IWEWEIPVDTKLIQNVGLHAI--PTMTKSPNDKWVVGQCMDNRIVLFQLVDDKL 482
Query: 358 RLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACI 417
R K K + H +G+ FS D L+SG +DG ++ ++ R+ ++ K KA++ CI
Sbjct: 483 RFSKKKAFRGHNAAGYACNIDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAHDSTCI 542
Query: 418 DVAFHPILPNIIGSCSWNGDVSVY 441
+HP + + + W+G + ++
Sbjct: 543 AALWHPHEKSRMITAGWDGLIKMW 566
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 350 (128.3 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 80/299 (26%), Positives = 141/299 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V I + P + + L SA +D ++ +W+V+ + + R H V DV + G
Sbjct: 328 HKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVY-KSKSCIRTYKGHFKGVKDVLFDNDGS 386
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
LSC YD + D E G + ++ + +P+++N FL GG+ + D RT
Sbjct: 387 SFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCLCLNPDDTNTFLVGGANNKICHIDFRT 446
Query: 264 GKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVE 323
G + EY + L I + N K+ I +W+ V +
Sbjct: 447 GNIELEYNEHLQAINTITLCENNKKLISTSDDKK-------IFIWEYGLPVVVKYISDAS 499
Query: 324 AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDG 383
++ V HP + +F+ QS N I ++ +T FRL K ++ H G+ I S S DG
Sbjct: 500 MFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKKTFKGHHNIGYSINVSCSNDG 559
Query: 384 EKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSVYE 442
+ ++SG S+G ++ +N + + IKA++ CID +HP +++ + SW+G + ++E
Sbjct: 560 KYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCVWHPFKTSMLATASWDGTIKLWE 618
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 350 (128.3 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 80/299 (26%), Positives = 141/299 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V I + P + + L SA +D ++ +W+V+ + + R H V DV + G
Sbjct: 328 HKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVY-KSKSCIRTYKGHFKGVKDVLFDNDGS 386
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
LSC YD + D E G + ++ + +P+++N FL GG+ + D RT
Sbjct: 387 SFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCLCLNPDDTNTFLVGGANNKICHIDFRT 446
Query: 264 GKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVE 323
G + EY + L I + N K+ I +W+ V +
Sbjct: 447 GNIELEYNEHLQAINTITLCENNKKLISTSDDKK-------IFIWEYGLPVVVKYISDAS 499
Query: 324 AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDG 383
++ V HP + +F+ QS N I ++ +T FRL K ++ H G+ I S S DG
Sbjct: 500 MFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKKTFKGHHNIGYSINVSCSNDG 559
Query: 384 EKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSVYE 442
+ ++SG S+G ++ +N + + IKA++ CID +HP +++ + SW+G + ++E
Sbjct: 560 KYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCVWHPFKTSMLATASWDGTIKLWE 618
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 337 (123.7 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 94/318 (29%), Positives = 152/318 (47%)
Query: 111 YLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSI 170
++ QD+ LR P S + IP ++ HHTKA+ S+N+ P HLL S D ++
Sbjct: 218 HVPQDLDIDLRKEPGSTT--NYIPKKMVHQWKHHTKAITSLNFFPNSGHLLLSGSADSTV 275
Query: 171 CIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFRE 230
IW+V+ + ++L R + HS +++D ++ G LS +D +L D E G F
Sbjct: 276 KIWDVYHQ-RELLRTYSGHSKSLSDTTFNTHGDKFLSASFDRMMKLWDTETGKCIAKFTT 334
Query: 231 ELAVRVVKFHP--ENSNLFLSGGSKGLLRLWDIRTG-KVAHEYIQSLGPILDVEFTINGK 287
VV+F+P E + F++G S + +D R G + EY LGP+ + F +G+
Sbjct: 335 GKTPHVVRFNPTSELGHEFVAGMSDNKIVQFDTRAGNETVQEYDHHLGPVNTITFCDDGR 394
Query: 288 QFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRH--HPFDPYFVAQSNG 345
+F + W+ VP+ K + E Y R HP Y QS+
Sbjct: 395 RFMTTSDDRT-------LRAWEYGFGVPI-KYI-AEPYLFAMTRAATHPSGKYVAYQSSD 445
Query: 346 NYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
N I ++SS FR ++ K Y H +G I S DG+ L SG + G + F++ +S ++
Sbjct: 446 NQIVVYSSNDKFRQNRKKSYRGHNNAGSAIDIDISADGQFLASGDTGGYVAFWDWKSCKM 505
Query: 406 ERKIKAYEQACIDVAFHP 423
KI+ + V +HP
Sbjct: 506 FHKIQVEDGQVSCVKWHP 523
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 334 (122.6 bits), Expect = 9.4e-30, P = 9.4e-30
Identities = 82/282 (29%), Positives = 131/282 (46%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HTK ++ + + P HLL S MD I IW V+ D+ L R H+ + D+ +SQ G
Sbjct: 265 HTKGISCLRFFPISGHLLLSGSMDNQIKIWEVY-HDRSLLRTFQGHARPIRDLSFSQDGR 323
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFH--PENSNLFLSGGSKGLLRLWDI 261
LS +D + +L D E G F + VKF P+ N FL+G + + +DI
Sbjct: 324 SFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDI 383
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+ + Y LG I + F NGK+F W+ VP+
Sbjct: 384 RSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRF-------WEYGTPVPIKFVAD 436
Query: 322 VEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSL 381
+ ++ P V P QS N I ++S+ +R +K K ++ + SG+ ++ FS
Sbjct: 437 IAMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSP 496
Query: 382 DGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
DG + SG S G+ F++ ++ +L K+ A+ +AFHP
Sbjct: 497 DGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHP 538
>ASPGD|ASPL0000032184 [details] [associations]
symbol:AN5196 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001305
EnsemblFungi:CADANIAT00003192 OMA:DHHLGPV Uniprot:C8VF70
Length = 531
Score = 297 (109.6 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 93/321 (28%), Positives = 142/321 (44%)
Query: 87 ATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLP---KSHVRRSK--IPGRLSTAL 141
ATD + D S V + GS YL + + + + L K V K +P +L
Sbjct: 220 ATDYQDDTSKV-ETTEFHGSEQYDYLGRTYMHVPQDLDIDLKKPVGSIKNYVPKKLVHTW 278
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
HTKA+ S+ + P HLL S+ D IW+V+ ++L R + HS A+ D +
Sbjct: 279 KSHTKAITSLRFFPQAGHLLLSSAADGKAKIWDVY-HSRELLRTFSGHSKAITDTDFHIT 337
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRLW 259
G L+ YD +L D E G F V++F+P ENS+ FL+G S + +
Sbjct: 338 GKTFLTASYDRQMKLWDTETGQCISRFSTGKTPHVIRFNPNPENSHEFLAGMSDKKIVQF 397
Query: 260 DIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLS-- 317
D RTG+ EY L I + F ++F + W+ VP+
Sbjct: 398 DTRTGEQVQEYDHHLAAINTLTFVDQNRRFISTSDDKS-------LRAWEYGIPVPIKFI 450
Query: 318 KQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKC 377
+ Y+ A T HP Y QS N I ++ +T FR ++ K + H +G+ I
Sbjct: 451 AEPYMFALTRAAA--HPNGKYVAFQSGDNQIVVYGATDKFRQNRKKSFRGHNNAGYAIDL 508
Query: 378 SFSLDGEKLVSGSSDGSIYFY 398
+ S DG+ + SG S G +Y
Sbjct: 509 TISPDGQFIASGDSAGLFSWY 529
Score = 40 (19.1 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 82 PGIPAATDPKPDPSAVVAAAQV 103
P +PAA+ PK VVAA +V
Sbjct: 17 PSVPAASAPK-----VVAAPEV 33
Score = 38 (18.4 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 3 LLCNAYSNTSDDEPEPASKHEPEL 26
LL AY ++ DD P + P++
Sbjct: 4 LLGAAYDSSDDDTPSVPAASAPKV 27
>CGD|CAL0001327 [details] [associations]
symbol:orf19.6347 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000348 "mRNA branch site recognition"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0001327 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12816
RefSeq:XP_711565.1 RefSeq:XP_711633.1 ProteinModelPortal:Q59PE6
STRING:Q59PE6 GeneID:3646758 GeneID:3646818 KEGG:cal:CaO19.13703
KEGG:cal:CaO19.6347 Uniprot:Q59PE6
Length = 520
Score = 301 (111.0 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 79/295 (26%), Positives = 140/295 (47%)
Query: 125 KSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQ---- 180
+ H++ +P R+ H K +N + + P HLL S G D I +W++++ Q
Sbjct: 193 QQHIQECFVPKRVIHIFPGHKKGINRLRFFPNSGHLLLSCGNDNLIKLWSIYNTFQGKQY 252
Query: 181 KLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFH 240
+L R+ H+ V D+ ++Q G LSCGYD RL D + G +S + + V+ F+
Sbjct: 253 QLLRIFKGHNLPVKDIIFNQSGERFLSCGYDKYIRLWDTKTGEMIKSIKLKSIPNVLLFN 312
Query: 241 PENSNL--FLSGGSKGLLRLWDIRTGKVAHE---YIQSLGPILDVEFTINGKQFXXXXXX 295
P N N F+ G S + +D + + + Y G I D++ ++ +F
Sbjct: 313 PNNKNNTEFIVGLSNFTIEHYDFNSIQYTNPIQIYDHHQGSINDLK-SLGLDKFISSSDD 371
Query: 296 XXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP 355
+ +W +P+ ++ PC++ HP Y QS N I + S
Sbjct: 372 KT-------VRIWSWQINIPIKVITDPSQHSIPCIKIHPQANYIALQSMDNSIKVIHSYG 424
Query: 356 PFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIK 410
F+ K K + H ++G+ I+ FS DG+ L+SG +G YF++ ++ +L +K+K
Sbjct: 425 KFKWYKKKFFTGHQIAGYGIEIDFSPDGKILMSGDCNGFAYFWDWKTCKLIKKLK 479
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 281 (104.0 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 86/307 (28%), Positives = 140/307 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L H K+++S+ +SP LASA D++I IW + D K R L H ++D+
Sbjct: 38 LKYTLKGHLKSISSVKFSPD-GKWLASASADKTIKIWGAY--DGKFERTLEGHKEGISDI 94
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSKG 254
WSQ + S D + ++ DVE G ++T +E V V F+P+ SNL +SG
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEY-VFGVSFNPQ-SNLIVSGSFDE 152
Query: 255 LLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREV 314
+R+WD+ TG+ P+ V F +G + +WD +
Sbjct: 153 NVRIWDVNTGECTKMISAHSDPVTGVHFNRDG-------TLVVSGSYDGTVRIWDTTTGQ 205
Query: 315 PLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFP 374
L+ + V+ P + +A + N + ++S + K Y H +
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKC--LKTYTGHKNEKYC 263
Query: 375 IKCSFSLD-GEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
I +FS+ G+ +V+GS D IY YN ++ E+ + + +E + VA HP NII S +
Sbjct: 264 IFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPT-ENIIASGA 322
Query: 434 WNGDVSV 440
D SV
Sbjct: 323 LEKDRSV 329
Score = 150 (57.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G+ L H + ++ I WS + L+ SA D++I IW+V S K+ + L H V
Sbjct: 78 GKFERTLEGHKEGISDIAWSQD-SKLICSASDDKTIKIWDVESG--KMVKTLKGHKEYVF 134
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL-AVRVVKFHPENSNLFLSGGSK 253
V ++ Q ++S +D + R+ DV G T+ V V F+ + + L +SG
Sbjct: 135 GVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGT-LVVSGSYD 193
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILD-VEFTINGK 287
G +R+WD TG++ + G + V+F+ NGK
Sbjct: 194 GTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGK 228
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 277 (102.6 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+S+ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 11 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 67
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ DV G ++ + V F+P+ SNL +SG
Sbjct: 68 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 126
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD++TGK P+ V F +G +WD +
Sbjct: 127 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 179
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 180 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCI 236
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N ++ E+ +K++ + I A HP NII S +
Sbjct: 237 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAAL 295
Query: 435 NGDVSV 440
D ++
Sbjct: 296 ENDKTI 301
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 277 (102.6 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+S+ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 37 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 93
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ DV G ++ + V F+P+ SNL +SG
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 152
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD++TGK P+ V F +G +WD +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 205
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCI 262
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N ++ E+ +K++ + I A HP NII S +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAAL 321
Query: 435 NGDVSV 440
D ++
Sbjct: 322 ENDKTI 327
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 277 (102.6 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+S+ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 37 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 93
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ DV G ++ + V F+P+ SNL +SG
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 152
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD++TGK P+ V F +G +WD +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 205
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCI 262
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N ++ E+ +K++ + I A HP NII S +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAAL 321
Query: 435 NGDVSV 440
D ++
Sbjct: 322 ENDKTI 327
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 277 (102.6 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+S+ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 37 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 93
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ DV G ++ + V F+P+ SNL +SG
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 152
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD++TGK P+ V F +G +WD +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 205
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCI 262
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N ++ E+ +K++ + I A HP NII S +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAAL 321
Query: 435 NGDVSV 440
D ++
Sbjct: 322 ENDKTI 327
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 277 (102.6 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+S+ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 37 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 93
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ DV G ++ + V F+P+ SNL +SG
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 152
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD++TGK P+ V F +G +WD +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 205
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCI 262
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N ++ E+ +K++ + I A HP NII S +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAAL 321
Query: 435 NGDVSV 440
D ++
Sbjct: 322 ENDKTI 327
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 277 (102.6 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 82/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+S+ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 37 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 93
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ DV G ++ + V F+P+ SNL +SG
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 152
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD++TGK P+ V F +G +WD +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 205
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCI 262
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N ++ E+ +K++ + I A HP NII S +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT-ENIIASAAL 321
Query: 435 NGDVSV 440
D ++
Sbjct: 322 ENDKTI 327
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 275 (101.9 bits), Expect = 8.6e-24, P = 8.6e-24
Identities = 82/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+S+ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 37 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 93
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ DV G ++ + V F+P+ SNL +SG
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 152
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD++TGK P+ V F +G +WD +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 205
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTCHKNEKYCI 262
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N ++ E+ +K++ + I A HP NII S +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPT-ENIIASAAL 321
Query: 435 NGDVSV 440
D ++
Sbjct: 322 ENDKTI 327
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 268 (99.4 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 80/306 (26%), Positives = 138/306 (45%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L HTKAV+++ +SP + LAS+ D+ I IW + D K + ++ H ++DV
Sbjct: 64 LKFTLAGHTKAVSAVKFSP-NGEWLASSSADKLIKIWGAY--DGKFEKTISGHKLGISDV 120
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGL 255
WS ++S D + ++ ++ G ++ + V F+P+ SNL +SG
Sbjct: 121 AWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 179
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD+RTGK P+ V F +G +WD +
Sbjct: 180 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR-------IWDTASGQC 232
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPI 375
L + + V+ P Y +A + N + ++ + L K Y H + I
Sbjct: 233 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCI 289
Query: 376 KCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSW 434
+FS+ G K +VSGS D +Y +N +S E+ +K++ + + A HP NII S +
Sbjct: 290 FANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPT-ENIIASAAL 348
Query: 435 NGDVSV 440
D ++
Sbjct: 349 ENDKTI 354
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 247 (92.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 83/326 (25%), Positives = 138/326 (42%)
Query: 118 SLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWS 177
SLL P+ K L L H+ A++S+ +SP + LAS+ D I IW +
Sbjct: 13 SLLS-APRREEEPQKPNYALRLTLAGHSAAISSVKFSP-NGEWLASSAADALIIIWGAY- 69
Query: 178 RDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKG--IETQSFREELAVR 235
D + L HS ++DV WS ++S D + ++ D+ G ++T + V
Sbjct: 70 -DGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDF-VF 127
Query: 236 VVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXX 295
F+P SNL +SG +++W+++TGK PI V F NG
Sbjct: 128 CCDFNPP-SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYD 186
Query: 296 XXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP 355
+WD + L V+ P Y + + N + ++ +
Sbjct: 187 GLCR-------IWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYS- 238
Query: 356 PFRLDKFKRYESHGVSGFPIKCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQ 414
R K Y H + + SFS+ G K +VSGS D +Y +N ++ E+ ++++ +
Sbjct: 239 --RGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTD 296
Query: 415 ACIDVAFHPILPNIIGSCSWNGDVSV 440
I A HP NII S + D ++
Sbjct: 297 VVISAACHPT-KNIIASAALENDKTI 321
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 246 (91.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 82/311 (26%), Positives = 146/311 (46%)
Query: 138 STALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLAR-VLNF--HSAAVN 194
S L H +AV+S+ +S + LLASA D++I + + + + +A V F H ++
Sbjct: 17 SQTLTSHNRAVSSVKFS-SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGIS 75
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGS 252
DV +S F++S D + +L DVE G I+T A V F+P+ SN+ +SG
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAF-CVNFNPQ-SNMIVSGSF 133
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR 312
+R+WD+ TGK P+ V+F +G +WD
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCR-------IWDSGT 186
Query: 313 EVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFS-STPPFRLDKFKRYESHGVS 371
+ + E VR P + + + N + +++ S+ F K Y H +
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF----LKTYTGHVNA 242
Query: 372 GFPIKCSFSL-DGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIG 430
+ I +FS+ +G+++VSGS D ++ + S +L +K++ + + ++VA HP N+I
Sbjct: 243 QYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPT-ENLIA 301
Query: 431 SCSWNGDVSVY 441
S S + V ++
Sbjct: 302 SGSLDKTVRIW 312
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 244 (91.0 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 80/307 (26%), Positives = 135/307 (43%)
Query: 134 PGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAV 193
P R L HT A++ + +S +LLASA +D+++ +W+ + + L HS+ +
Sbjct: 32 PYRHLKTLEGHTAAISCVKFS-NDGNLLASASVDKTMILWS--ATNYSLIHRYEGHSSGI 88
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELA-VRVVKFHPENSNLFLSGG 251
+D+ WS + S DC+ R+ D E + R V V F+P SNL +SG
Sbjct: 89 SDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP-SNLIVSGS 147
Query: 252 SKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVS 311
+R+W+++TGK PI V F +G +WD
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCK-------IWDAK 200
Query: 312 REVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLD-----KF-KRY 365
L + ++ P V F P NG +I + + +L KF K Y
Sbjct: 201 EGTCLKTLIDDKS---PAVSFAKFSP------NGKFILVATLDSTLKLSNYATGKFLKVY 251
Query: 366 ESHGVSGFPIKCSFSL-DGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPI 424
H F I +FS+ +G+ +VSGS D +Y ++ ++ + ++++ + A I V+ HP+
Sbjct: 252 TGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPV 311
Query: 425 LPNIIGS 431
I S
Sbjct: 312 QNEISSS 318
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 253 (94.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 88/367 (23%), Positives = 162/367 (44%)
Query: 82 PGIPAATDPKP--DPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKIPG---R 136
P PA + + + A A L S+S A I ++ + + S IPG +
Sbjct: 13 PAAPAVEEAQGVNNSEAEAPAPAALSSVSPA--NPPITAVPEATAPTTSQESTIPGAGYK 70
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L + + HTK+++++ +SP L ++ D+++ IWN+ D R L H VND
Sbjct: 71 LISTIEGHTKSISAVKFSPC-GKFLGTSSADKTVKIWNM--SDLSCERTLTGHKLGVNDF 127
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGL 255
WS +++ D + ++ +V ++ + V F+P++S L +SG
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSS-LVVSGSFDES 186
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVP 315
+R+WD+RTG P+ V F +G + +WD +
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGL-------VRIWDTANGQC 239
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDK-FKRYESHGVSGFP 374
+ V E V+ P Y ++ + N + ++ F K K+Y+ H + +
Sbjct: 240 VKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD----FGKGKTLKQYQGHENNKYC 295
Query: 375 IKCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
I +FS+ G K ++SGS D IY +N ++ E+ + ++ + QA I HP + N+I S +
Sbjct: 296 IFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHP-MQNMIASGA 354
Query: 434 WNGDVSV 440
D ++
Sbjct: 355 LEPDNTI 361
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 253 (94.1 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 83/321 (25%), Positives = 144/321 (44%)
Query: 109 DAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQ 168
D LR++ +S +LPK +R PG H + ++ + P HL+ S G D
Sbjct: 136 DVDLREERISFRCYLPKKVIRN--YPG--------HPEGTTALKFLPKTGHLILSGGNDH 185
Query: 169 SICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKG-IETQS 227
+I IW+ + D + R H+ + +++++ LS +D S ++ D E G ++T+
Sbjct: 186 TIKIWDFY-HDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDTETGKVKTRL 244
Query: 228 FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGK---VAHEYIQSLGPILDVEFTI 284
V + P N + F+ G S + +D R + + Y L IL +++
Sbjct: 245 HLNSTPADV-ESRPTNPHEFIVGLSNSKILHYDDRVSENQGLVQTYDHHLSSILALKYFP 303
Query: 285 NGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEA-YTCPCVRHHPFDPYFVAQS 343
+G +F + +W+ VP+ KQ+ A ++ P + HP YF AQS
Sbjct: 304 DGSKFISSSEDKT-------VRIWENQINVPI-KQISDTAQHSMPFLNVHPSQNYFCAQS 355
Query: 344 NGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSS 403
N I FS P ++ K ++ H +G+ I +FS DG + SG S ++ ++ +S
Sbjct: 356 MDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWNTS 415
Query: 404 ELERKIKAYEQACI-DVAFHP 423
L IK I V +HP
Sbjct: 416 RLLNNIKIPGNKPITQVDWHP 436
Score = 41 (19.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 10 NTSDDEPEPASKHEPELRSIF 30
++SDDE AS+ + E + IF
Sbjct: 73 SSSDDETSQASETQKEDQDIF 93
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 240 (89.5 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 77/309 (24%), Positives = 140/309 (45%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLA-RVLNFHSAAVN 194
+L L HTK+++S +SP +L S+ D+++ IWN+ D + R L H VN
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSA-DKTVKIWNM---DHMICERTLTGHKLGVN 133
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSK 253
D+ WS V+S D + ++ ++ T++ + V F+P++S L +SG
Sbjct: 134 DIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFD 192
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE 313
+R+WD++TG P+ V F +G + +WD +
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-------VRIWDTANG 245
Query: 314 VPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGF 373
+ V E V+ P Y +A + + + ++ + L K+Y H S +
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTL---KQYTGHENSKY 302
Query: 374 PIKCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSC 432
I +FS+ G K ++SGS D IY +N ++ E+ + ++ + Q + HP+ NII S
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPV-QNIIASG 361
Query: 433 SWNGDVSVY 441
+ D ++
Sbjct: 362 ALEPDNKIH 370
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 240 (89.5 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 77/309 (24%), Positives = 140/309 (45%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLA-RVLNFHSAAVN 194
+L L HTK+++S +SP +L S+ D+++ IWN+ D + R L H VN
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSA-DKTVKIWNM---DHMICERTLTGHKLGVN 133
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSK 253
D+ WS V+S D + ++ ++ T++ + V F+P++S L +SG
Sbjct: 134 DIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFD 192
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE 313
+R+WD++TG P+ V F +G + +WD +
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-------VRIWDTANG 245
Query: 314 VPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGF 373
+ V E V+ P Y +A + + + ++ + L K+Y H S +
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTL---KQYTGHENSKY 302
Query: 374 PIKCSFSLDGEK-LVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSC 432
I +FS+ G K ++SGS D IY +N ++ E+ + ++ + Q + HP+ NII S
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPV-QNIIASG 361
Query: 433 SWNGDVSVY 441
+ D ++
Sbjct: 362 ALEPDNKIH 370
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 236 (88.1 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 86/324 (26%), Positives = 137/324 (42%)
Query: 124 PKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLA 183
P R S + + L H AV ++ ++P L+AS D+ I +W V D K
Sbjct: 33 PNGKNRTSSLEAPIML-LSGHPSAVYTMKFNPAGT-LIASGSHDREIFLWRVHG-DCKNF 89
Query: 184 RVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPEN 243
VL H A+ D+ W+ G ++S D + R DVE G + + E + V P
Sbjct: 90 MVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSF-VNSCCPTR 148
Query: 244 SN--LFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXX 301
L +SG G +LWD+R IQ+ P D ++ I F
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQRGA----IQTF-P--D-KYQITAVSFSDAADKIFTGGV 200
Query: 302 XXXIVVWDVSR-EVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF- 357
+ VWD+ + E ++ + + + T + P Y + N + ++ P P
Sbjct: 201 DNDVKVWDLRKGEATMTLEGHQDTITGMSLS--PDGSYLLTNGMDNKLCVWDMRPYAPQN 258
Query: 358 RLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACI 417
R K H +KCS+S DG K+ +GSSD ++ ++ S K+ + +
Sbjct: 259 RCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVN 318
Query: 418 DVAFHPILPNIIGSCSWNGDVSVY 441
+ FHP P IIGSCS D ++Y
Sbjct: 319 ECVFHPTEP-IIGSCS--SDKNIY 339
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 213 (80.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 78/298 (26%), Positives = 128/298 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +WNV+ A L HS AV ++ ++
Sbjct: 62 LSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELHYNT 119
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 120 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 179 WDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 229
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPI 375
+ A + + Y ++ + N + ++ P P R K + H +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
+CS+S DG K+ +GS+D +Y ++ S + K+ + + +VAFHP P II + S
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASS 347
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 61/261 (23%), Positives = 117/261 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ AV ++++ T +L SA D+++ +W+ S + + L H++ VN +++G
Sbjct: 108 HSGAVMELHYN-TDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGP 164
Query: 204 FVLSCGYDCSS-RLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ G D + +L D+ K Q+F+ V V F+ + S+ +SGG +++WD+R
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFN-DTSDQIISGGIDNDIKVWDLR 223
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
K+ + ++ D ++ G + VWDV P K+ V
Sbjct: 224 QNKLTY----TMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP--KERCV 274
Query: 323 EAYTCPCVRHHPFDPYFVAQS---NGNYIAIFSSTP-PFRLDKFKR---YESHGVSGFPI 375
+ + H F+ + S +G+ IA S+ + D R Y+ G +G
Sbjct: 275 KIFQGNV---HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 331
Query: 376 KCSFSLDGEKLVSGSSDGSIY 396
+ +F D ++S SSD +Y
Sbjct: 332 EVAFHPDEPIIISASSDKRLY 352
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 213 (80.0 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 76/298 (25%), Positives = 128/298 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +WNV+ A L HS AV ++ ++
Sbjct: 63 LSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELHYNT 120
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 121 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 180 WDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 230
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFP---I 375
+ A + + Y ++ + N + ++ P ++ R V F +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLL 290
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
+CS+S DG K+ +GS+D +Y ++ S + K+ + + +VAFHP P I+ + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASS 348
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 60/261 (22%), Positives = 115/261 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ AV ++++ T +L SA D+++ +W+ S + + L H++ VN +++G
Sbjct: 109 HSGAVMELHYN-TDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 204 FVLSCGYDCSS-RLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ G D + +L D+ K Q+F+ V V F+ + S+ +SGG +++WD+R
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFN-DTSDQIISGGIDNDIKVWDLR 224
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
K+ + ++ D ++ G + VWDV P + V +
Sbjct: 225 QNKLTY----TMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRI 277
Query: 323 EAYTCPCVRHHPFDPYFVAQS---NGNYIAIFSSTP-PFRLDKFKR---YESHGVSGFPI 375
H F+ + S +G+ IA S+ + D R Y+ G +G
Sbjct: 278 FQGNV-----HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 376 KCSFSLDGEKLVSGSSDGSIY 396
+ +F D ++S SSD +Y
Sbjct: 333 EVAFHPDEPIILSASSDKRLY 353
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 211 (79.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 77/298 (25%), Positives = 128/298 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +WNV+ A L HS AV ++ ++
Sbjct: 63 LSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELHYNT 120
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 121 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 180 WDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 230
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPI 375
+ A + + Y ++ + N + ++ P P R K + H +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
+CS+S DG K+ +GS+D +Y ++ S + K+ + + +VAFHP P I+ + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASS 348
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 61/261 (23%), Positives = 117/261 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ AV ++++ T +L SA D+++ +W+ S + + L H++ VN +++G
Sbjct: 109 HSGAVMELHYN-TDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 204 FVLSCGYDCSS-RLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ G D + +L D+ K Q+F+ V V F+ + S+ +SGG +++WD+R
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFN-DTSDQIISGGIDNDIKVWDLR 224
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
K+ + ++ D ++ G + VWDV P K+ V
Sbjct: 225 QNKLTY----TMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP--KERCV 275
Query: 323 EAYTCPCVRHHPFDPYFVAQS---NGNYIAIFSSTP-PFRLDKFKR---YESHGVSGFPI 375
+ + H F+ + S +G+ IA S+ + D R Y+ G +G
Sbjct: 276 KIFQGNV---HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 376 KCSFSLDGEKLVSGSSDGSIY 396
+ +F D ++S SSD +Y
Sbjct: 333 EVAFHPDEPIILSASSDKRLY 353
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 211 (79.3 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 77/298 (25%), Positives = 128/298 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +WNV+ A L HS AV ++ ++
Sbjct: 63 LSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELHYNT 120
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 121 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 180 WDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 230
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPI 375
+ A + + Y ++ + N + ++ P P R K + H +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
+CS+S DG K+ +GS+D +Y ++ S + K+ + + +VAFHP P I+ + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASS 348
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 61/261 (23%), Positives = 117/261 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ AV ++++ T +L SA D+++ +W+ S + + L H++ VN +++G
Sbjct: 109 HSGAVMELHYN-TDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 204 FVLSCGYDCSS-RLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ G D + +L D+ K Q+F+ V V F+ + S+ +SGG +++WD+R
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFN-DTSDQIISGGIDNDIKVWDLR 224
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
K+ + ++ D ++ G + VWDV P K+ V
Sbjct: 225 QNKLTY----TMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP--KERCV 275
Query: 323 EAYTCPCVRHHPFDPYFVAQS---NGNYIAIFSSTP-PFRLDKFKR---YESHGVSGFPI 375
+ + H F+ + S +G+ IA S+ + D R Y+ G +G
Sbjct: 276 KIFQGNV---HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSIN 332
Query: 376 KCSFSLDGEKLVSGSSDGSIY 396
+ +F D ++S SSD +Y
Sbjct: 333 EVAFHPDEPIILSASSDKRLY 353
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 77/298 (25%), Positives = 128/298 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +WNV+ A L HS AV ++ ++
Sbjct: 63 LSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELHYNT 120
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 121 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 180 WDIRK-KAAVQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 230
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPI 375
+ A + + Y ++ + N + ++ P P R K + H +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
+CS+S DG K+ +GS+D +Y ++ S + K+ + + +VAFHP P I+ + S
Sbjct: 291 RCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASS 348
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 61/261 (23%), Positives = 117/261 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ AV ++++ T +L SA D+++ +W+ S + + L H++ VN +++G
Sbjct: 109 HSGAVMELHYN-TDGSMLFSASTDKTVAVWD--SETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 204 FVLSCGYDCSS-RLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ G D + +L D+ K Q+F+ V V F+ + S+ +SGG +++WD+R
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFN-DTSDQIISGGIDNDIKVWDLR 224
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
K+ + ++ D ++ G + VWDV P K+ V
Sbjct: 225 QNKLTY----TMRGHAD---SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAP--KERCV 275
Query: 323 EAYTCPCVRHHPFDPYFVAQS---NGNYIAIFSSTP-PFRLDKFKR---YESHGVSGFPI 375
+ + H F+ + S +G+ IA S+ + D R Y+ G +G
Sbjct: 276 KIFQGNV---HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSIN 332
Query: 376 KCSFSLDGEKLVSGSSDGSIY 396
+ +F D ++S SSD +Y
Sbjct: 333 EVAFHPDEPIILSASSDKRLY 353
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 207 (77.9 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +WNV+ A L HS AV ++ ++
Sbjct: 89 LSGHEGEVYCCKFHPW-GNTLASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELHYNT 146
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 147 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 205
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 206 WDIRK-KAAVQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 256
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPI 375
+ A + + Y ++ + N + I+ P P R K + H +
Sbjct: 257 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLL 316
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
+CS+S DG K+ GS+D +Y ++ S + K+ + + ++AFHP P I+ + S
Sbjct: 317 RCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASS 374
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 205 (77.2 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 75/299 (25%), Positives = 128/299 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P A LAS+G D+ I +WNV+ + A L HS AV ++ ++
Sbjct: 52 LSGHEGEVYCCKFHPNGA-TLASSGYDRLILMWNVYGDCENYA-TLKGHSGAVMELHYNT 109
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V P L +G G ++L
Sbjct: 110 DGSLLFSASTDKTVCVWDSETGERVKRLKGHTSF-VNSCFPARRGPQLACTGSDDGTVKL 168
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR-EVPLS 317
WDIR H + Q+ +L V F Q I VWD+ + ++ S
Sbjct: 169 WDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDND-------IKVWDLRQNKLIYS 220
Query: 318 KQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFP 374
Q + ++ T + Y ++ S N + ++ P P R K + H
Sbjct: 221 MQGHGDSVTGLSLSAD--GSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNL 278
Query: 375 IKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
++CS+S DG K+ +GS+D +Y ++ + + K+ + + +VAFHP P ++ S
Sbjct: 279 LRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSS 337
Score = 143 (55.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 62/261 (23%), Positives = 117/261 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ AV ++++ T LL SA D+++C+W+ S + + L H++ VN +++G
Sbjct: 98 HSGAVMELHYN-TDGSLLFSASTDKTVCVWD--SETGERVKRLKGHTSFVNSCFPARRGP 154
Query: 204 FVLSCGYDCSS-RLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+ G D + +L D+ K +F+ V V F+ + S+ +SGG +++WD+R
Sbjct: 155 QLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFN-DTSDQIISGGIDNDIKVWDLR 213
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
K+ + +Q G ++ G + VWD+ P K+ V
Sbjct: 214 QNKLIYS-MQGHGD------SVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAP--KERCV 264
Query: 323 EAYTCPCVRHHPFDPYFVAQS---NGNYIAIFSSTP-PFRLDKFKR---YESHGVSGFPI 375
+ + H F+ + S +G+ IA S+ + D R Y+ G +G
Sbjct: 265 KIFQGNV---HNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVN 321
Query: 376 KCSFSLDGEKLVSGSSDGSIY 396
+ +F + ++SGSSD +Y
Sbjct: 322 EVAFHPEEPIVLSGSSDKRLY 342
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 205 (77.2 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 76/293 (25%), Positives = 125/293 (42%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +WNV+ A L HS AV ++ ++
Sbjct: 62 LSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELHYNT 119
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 120 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 179 WDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 229
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPI 375
+ A + + Y ++ + N + ++ P P R K + H +
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 289
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNI 428
+CS+S DG K+ +GS+D +Y ++ S + K+ + + +VAFHP P I
Sbjct: 290 RCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 203 (76.5 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 69/299 (23%), Positives = 136/299 (45%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H+ V ++ + PT H+ AS MD+SI +WN + + + +L+ H A+ D++WS+
Sbjct: 62 LTGHSGEVFAVRFDPTAQHI-ASGSMDRSILLWNTYGQCENYG-ILSGHKGAILDLQWSR 119
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSF--REELAVRVVKFHPENSNLFLSGGSKGLLRL 258
+ S D + D+E G + + EE+ + V+ + +S G + +
Sbjct: 120 DSKTIFSASADMTLASWDIESGQRIRRYIGHEEV-INSVEISKRGQEMLVSASDDGTMGI 178
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE-VPLS 317
WD R K A +Y+++ PI V + G + I VWD+ ++ + S
Sbjct: 179 WDPRQ-KEAIDYLETELPITAVAQSEAGNEVFSGGIDNA-------IHVWDIRKKAIVYS 230
Query: 318 KQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKR-YESH--GVSGFP 374
+++ T + P ++ S + + + P ++ R Y+ G+
Sbjct: 231 MAGHMDTITS--LEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNL 288
Query: 375 IKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
I+ S++ G+K+ +GS D S+ ++ ++ ++ K+ ++ DV F P II S S
Sbjct: 289 IRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSAS 347
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 194 (73.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 69/266 (25%), Positives = 110/266 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V S+ +SP H +LLASA D+++ +W + + K + H+A V V +S G
Sbjct: 59 HKDVVTSVQFSP-HGNLLASASRDRTVRLW-IPDKRGKFSE-FKAHTAPVRSVDFSADGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
F+ + D S ++ + + S +R VR KF P+ L +S +++WD
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTT 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + S+G V+F +G + VWDV R L + V
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSG-------TCIASAGSDQTVKVWDV-RVNKLLQHYQV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ C+ HP D Y V S+ + I L+ Y G +G SFS
Sbjct: 227 HSGGVNCISFHPSDNYLVTASSDGTLKILDL-----LEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 383 GEKLVSGSSDGSIYFYNCRSSELERK 408
GE SG +D + + EL K
Sbjct: 282 GELFASGGADTQVLLWRTNFDELHCK 307
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA--V 193
R +L HT V +SP L+ S D++I IW+ ++ V NF +
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQC----VNNFSDSVGFA 189
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGS 252
N V ++ G + S G D + ++ DV Q ++ V + FHP + N ++ S
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSD-NYLVTASS 248
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
G L++ D+ G++ + GP+ V F+ G+ F
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 285
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/269 (22%), Positives = 111/269 (41%)
Query: 177 SRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSF-REELAVR 235
+ D L R H AA+ + S G + + +D L + + + + V
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVT 64
Query: 236 VVKFHPENSNLFLSGGSKGLLRLW--DIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXX 293
V+F P + NL S +RLW D R GK + E+ P+ V+F+ +G QF
Sbjct: 65 SVQFSP-HGNLLASASRDRTVRLWIPDKR-GKFS-EFKAHTAPVRSVDFSADG-QFLATA 120
Query: 294 XXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSS 353
I VW + R+ L +Y + C + P V+ S I I+ +
Sbjct: 121 SEDKS------IKVWSMYRQRFLYS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 354 TPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYE 413
T ++ F +S G + F F+ G + S SD ++ ++ R ++L + + +
Sbjct: 174 TNKQCVNNFS--DSVGFANF---VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS 228
Query: 414 QACIDVAFHPILPNIIGSCSWNGDVSVYE 442
++FHP N + + S +G + + +
Sbjct: 229 GGVNCISFHPS-DNYLVTASSDGTLKILD 256
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 137 (53.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 44/137 (32%), Positives = 65/137 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V SIN+S + +AS+ D +I + NV++ + + VL H AV KW Q
Sbjct: 36 HKGEVYSINFS-SDGKYIASSSFDMTIMVHNVYNECETIG-VLRGHKNAVLQAKWLQDDN 93
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
++ S D L DVE + +SF+ + V N NLF+S L+ WDIR+
Sbjct: 94 YICSASADHKLFLWDVECESKLRSFKGHDNI-VNGLDIINHNLFVSCSDDNTLKFWDIRS 152
Query: 264 GKVAHEYIQSLGPILDV 280
H I+ P+L V
Sbjct: 153 KWAVH-IIKHDFPLLSV 168
Score = 96 (38.9 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 375 IKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
IK SF+ D L GS D +Y Y+ + L+ + + DVAFHP+ +I+ SCS
Sbjct: 258 IKLSFNNDN-LLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPV-EDIVASCS 314
Score = 62 (26.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 185 VLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQS-FR-EELAVRVVKFHPE 242
++N H V + +S G ++ S +D + + +V ET R + AV K+ +
Sbjct: 32 LINSHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKWL-Q 90
Query: 243 NSNLFLSGGSKGLLRLWDI 261
+ N S + L LWD+
Sbjct: 91 DDNYICSASADHKLFLWDV 109
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 373 FPIK--CSFSLDGEKLVSGSSDGSIYFYNCRSSELE 406
FP+ CS GE L + D +I Y+C++ +L+
Sbjct: 163 FPLLSVCS-DKKGEFLFTSCVDNTIKKYDCKNYKLK 197
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 382 DGEKLVSGSSDGSIYFYNCRSSELERKI 409
D L S S+D SI F++ + E K+
Sbjct: 215 DETMLASISADESICFWDIQPFSCEEKL 242
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 186 (70.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 83/321 (25%), Positives = 135/321 (42%)
Query: 129 RRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF 188
R SK+ + L H + S ++ ++ LAS G D+ I +WNV+ + VL
Sbjct: 47 RTSKLEHPIMQ-LIGHKGEIYSCKFN-SYGTALASGGSDKEIFLWNVYGECINYS-VLKG 103
Query: 189 HSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSN--L 246
H + ++ WS + + D S + D KG + RE V V P L
Sbjct: 104 HKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGV-VNSCCPARRGPPL 162
Query: 247 FLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIV 306
SG R++D R+ H + Q P+ V F+ Q I
Sbjct: 163 VASGSDDRSARIFDTRSKGSTHLF-QHKYPVTSVCFSDASDQLITGGIDNV-------IR 214
Query: 307 VWDV-SREVPL-SKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSS---TPPFR-LD 360
VWD+ ++E PL + + + T V Y ++ S N I+ PP R +
Sbjct: 215 VWDIRNQEDPLYTLASHQDTITSTSVSKD--GAYLLSNSMDNSCKIWDIRPYAPPNRNIK 272
Query: 361 KFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVA 420
F +++ IK S+S+DG ++ GSSD +Y ++ + +L+ + + +V
Sbjct: 273 TFNGAQNNFEKNL-IKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVT 331
Query: 421 FHPILPNIIGSCSWNGDVSVY 441
FHP P II SCS D ++Y
Sbjct: 332 FHPNEP-IIASCS--SDKTIY 349
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 76/349 (21%), Positives = 140/349 (40%)
Query: 91 KPDPSAVVAAAQVLGSISD--AYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAV 148
+P+ S V+ A + S +D AY +D + L +S VRR+ L H +
Sbjct: 5 RPNNS-VILAQEAKRSKNDLMAYTNRD-----KALLESGVRRTSNLQAPIMQLEGHEGEI 58
Query: 149 NSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSC 208
+ + P LL S+G D+ I IW V+ D + ++ HS AV + ++ G + +C
Sbjct: 59 FTAEFHP-EGELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHFTPDGSHIFTC 116
Query: 209 GYDCSSRLVDVEKGIETQSFREE-LAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVA 267
D + D+ G + F+ V V+ L SG +++WD R A
Sbjct: 117 STDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAA 176
Query: 268 HEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTC 327
H L+ F + F + +WD+ ++ L + + T
Sbjct: 177 HT--------LESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLH-HLRGHSDTI 227
Query: 328 PCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPIKCSFSLDGE 384
+ P + + + N + ++ P P R K + H ++C++S +
Sbjct: 228 TGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSD 287
Query: 385 KLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
K+ SGS+D +Y ++ + + K+ + + V F P P I+ S
Sbjct: 288 KITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSS 336
Score = 115 (45.5 bits), Expect = 0.00075, P = 0.00075
Identities = 64/265 (24%), Positives = 104/265 (39%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H+ AV +++P +H+ + D+++ W++ + Q+ R H VN V+ S
Sbjct: 93 AMSGHSGAVMEAHFTPDGSHIF-TCSTDKTLAFWDI-ATGQRQRRFKG-HGNFVNSVQGS 149
Query: 200 QQGLFVLSCGYDCSS-RLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
++G +L G D + ++ D K + V V F + +SGG +++
Sbjct: 150 RRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQV-ISGGIDNEVKI 208
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR V H L D TI G + VWDV P +
Sbjct: 209 WDIRKQAVLHH----LRGHSD---TITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGER 261
Query: 319 QVYVEAYTCPCVRHHPFDPYFV--AQSNGNYIAIFSSTPP--FRLDKFKR---YESHGVS 371
V V H F+ + A S G+ S + D R Y+ G +
Sbjct: 262 CVKVFQG-----HQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHN 316
Query: 372 GFPIKCSFSLDGEKLVSGSSDGSIY 396
G FS ++SGSSD ++Y
Sbjct: 317 GSVNAVDFSPKEPLILSGSSDKTLY 341
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 67/266 (25%), Positives = 109/266 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V S+ +SP H +LLASA D+++ +W + + K + H+A V V +S G
Sbjct: 17 HKDVVTSVQFSP-HGNLLASASRDRTVRLW-IPDKRGKFSE-FKAHTAPVRSVDFSADGQ 73
Query: 204 FVLSCGYDCSSRLVDVEKGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
F+ + D S ++ + + S +R VR KF P+ L +S +++WD
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTT 132
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + S+G V+F +G + VWDV R L + V
Sbjct: 133 NKQCVNNFSDSVGFANFVDFNPSG-------TCIASAGSDQTVKVWDV-RVNKLLQHYQV 184
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ C+ HP Y + S+ + I L+ Y G +G SFS
Sbjct: 185 HSGGVNCISFHPSGNYLITASSDGTLKILDL-----LEGRLIYTLQGHTGPVFTVSFSKG 239
Query: 383 GEKLVSGSSDGSIYFYNCRSSELERK 408
GE SG +D + + EL K
Sbjct: 240 GELFASGGADTQVLLWRTNFDELHCK 265
Score = 134 (52.2 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA--V 193
R +L HT V +SP L+ S D++I IW+ ++ V NF +
Sbjct: 93 RFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQC----VNNFSDSVGFA 147
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGS 252
N V ++ G + S G D + ++ DV Q ++ V + FHP + N ++ S
Sbjct: 148 NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP-SGNYLITASS 206
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
G L++ D+ G++ + GP+ V F+ G+ F
Sbjct: 207 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 243
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 68/284 (23%), Positives = 118/284 (41%)
Query: 134 PGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAV 193
P + L H AV + +SP+ HL+AS D+++C+W + + + V H+A V
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSPS-GHLVASGSRDKTVCLWVPSVKGE--STVFKAHTATV 107
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGS 252
V +S G +++ D + ++ V + S + + VR +F P+ L S
Sbjct: 108 RSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG-RLIASASD 166
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR 312
++LWD + + H + + G VEF +G + VWDV R
Sbjct: 167 DKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG-------TCIAAAGTDKTVKVWDV-R 218
Query: 313 EVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSG 372
L + V + HP Y + SN + + I L+ Y HG G
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDL-----LEGRLLYTLHGHQG 273
Query: 373 FPIKC-SFSLDGEKLVSGSSDGSIYFY--NCRSSELERKIKAYE 413
P C +FS G+ SG SD + + N +++ + +K ++
Sbjct: 274 -PATCVAFSRTGDFFASGGSDEQVMVWKTNFSAADYDGVLKTHK 316
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00082
Identities = 65/283 (22%), Positives = 113/283 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H A+ S+++S + LAS MD + IW++ + Q A L H AV V++S G
Sbjct: 19 HRDAITSVDFS-LNKKQLASGSMDSCLKIWSM--KPQMRAYCLVGHKDAVMCVQFSPSGH 75
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDI 261
V S D + L V KG E+ F+ A VR V F + +L + K +++W +
Sbjct: 76 LVASGSRDKTVCLWVPSVKG-ESTVFKAHTATVRSVHFSSDGQSLVTASDDK-TIKVWTV 133
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWD-VSREVPLSKQV 320
K Q + + F+ +G+ + +WD SRE S
Sbjct: 134 HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKT-------VKLWDKTSRECIHS--- 183
Query: 321 YVE-AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKF-KRYESHGVSGFPIKCS 378
+ E V HP A + ++ R+++ + Y+ H + + S
Sbjct: 184 FCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWD----VRMNRLLQHYQVHTAAVNSL--S 237
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
F G L++ S+D ++ + L + ++ VAF
Sbjct: 238 FHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAF 280
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 186 (70.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 67/266 (25%), Positives = 109/266 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V S+ +SP H +LLASA D+++ +W + + K + H+A V V +S G
Sbjct: 59 HKDVVTSVQFSP-HGNLLASASRDRTVRLW-IPDKRGKFSE-FKAHTAPVRSVDFSADGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
F+ + D S ++ + + S +R VR KF P+ L +S +++WD
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTT 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + S+G V+F +G + VWDV R L + V
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSG-------TCIASAGSDQTVKVWDV-RVNKLLQHYQV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ C+ HP Y + S+ + I L+ Y G +G SFS
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDL-----LEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 383 GEKLVSGSSDGSIYFYNCRSSELERK 408
GE SG +D + + EL K
Sbjct: 282 GELFASGGADTQVLLWRTNFDELHCK 307
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA--V 193
R +L HT V +SP L+ S D++I IW+ ++ V NF +
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQC----VNNFSDSVGFA 189
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGS 252
N V ++ G + S G D + ++ DV Q ++ V + FHP + N ++ S
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP-SGNYLITASS 248
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
G L++ D+ G++ + GP+ V F+ G+ F
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 285
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 61/269 (22%), Positives = 111/269 (41%)
Query: 177 SRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSF-REELAVR 235
+ D L R H AA+ + S G + + +D L + + + + V
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVT 64
Query: 236 VVKFHPENSNLFLSGGSKGLLRLW--DIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXX 293
V+F P + NL S +RLW D R GK + E+ P+ V+F+ +G QF
Sbjct: 65 SVQFSP-HGNLLASASRDRTVRLWIPDKR-GKFS-EFKAHTAPVRSVDFSADG-QFLATA 120
Query: 294 XXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSS 353
I VW + R+ L +Y + C + P V+ S I I+ +
Sbjct: 121 SEDKS------IKVWSMYRQRFLYS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 354 TPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYE 413
T ++ F +S G + F F+ G + S SD ++ ++ R ++L + + +
Sbjct: 174 TNKQCVNNFS--DSVGFANF---VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS 228
Query: 414 QACIDVAFHPILPNIIGSCSWNGDVSVYE 442
++FHP N + + S +G + + +
Sbjct: 229 GGVNCISFHPS-GNYLITASSDGTLKILD 256
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 176 (67.0 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 68/312 (21%), Positives = 130/312 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H + V+++ +SP A ++AS G D ++ +W + KL H A ++ + WS G
Sbjct: 175 HLRGVSAVRFSPD-ASMIASGGADGAVKVWA--ASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 204 FVLSCGYDCSSRLVDV--EKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + RL +V K T V + F P+ N+ +SG + LWD+
Sbjct: 232 TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKG-NMLVSGSYDEAVFLWDV 290
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
R+ +V P+ ++ +G + +WD S L V+
Sbjct: 291 RSARVMKSLPAHSDPVSGIDVVWDG-------TLIASCATDGLVRIWDTSTGQCLRTLVH 343
Query: 322 VEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSL 381
+ V+ P Y +A + + + ++ L K Y+ H + + +F +
Sbjct: 344 EDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCL---KTYQGHSNKKYSLSGAFGV 400
Query: 382 DGEKL----------VSGSSDGSIYFYNCRSSELERKIKAYEQACIDV-AFHPILPNIIG 430
G+ + VSGS DG+I ++ + ++ ++I+A++ + V +
Sbjct: 401 YGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMV 460
Query: 431 SCSWNGDVSVYE 442
SC +G V V+E
Sbjct: 461 SCGLDGTVRVWE 472
Score = 128 (50.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 42/155 (27%), Positives = 73/155 (47%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G+L H +++I+WSP A +AS D++I +WNV + + H+ V
Sbjct: 208 GKLIYTFEGHLAGISTISWSPDGA-TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNY-VY 265
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL-AVRVVKFHPENSNLFLSGGSK 253
+ +S +G ++S YD + L DV +S V + + + L S +
Sbjct: 266 AIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGT-LIASCATD 324
Query: 254 GLLRLWDIRTGKVAHEYI-QSLGPILDVEFTINGK 287
GL+R+WD TG+ + + P+ V+F+ NGK
Sbjct: 325 GLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGK 359
Score = 53 (23.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 11 TSDDEPEPASKHEPELR--SIFSPPSKRPRP 39
TS DE S H+ E R S+ + P KRP P
Sbjct: 23 TSSDELAAGSDHDQERRRVSLNAYPPKRPYP 53
Score = 49 (22.3 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 14 DEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLH 52
DE + ++EPE + P + P P P P KP ++
Sbjct: 132 DEMDTVGENEPE-----TDPDRSPTPVPPPPPPKPESVN 165
Score = 38 (18.4 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 21/60 (35%), Positives = 27/60 (45%)
Query: 73 SKRERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRSK 132
SKR R L P P + P S +AA GS D R+ +SL + PK RS+
Sbjct: 5 SKRRR--LTPSPPPISSPIETSSDELAA----GSDHDQERRR--VSLNAYPPKRPYPRSR 56
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 64/263 (24%), Positives = 111/263 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HT + +N++P+ + L+AS+ DQ++ +W + + + V H+A+V V +S+ G
Sbjct: 59 HTDVITGVNFAPSGS-LVASSSRDQTVRLWTPSIKGE--STVFKAHTASVRSVHFSRDGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+++ D S ++ VE+ S R VR +F P+ L S G +RLWD
Sbjct: 116 RLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDG-RLIASCGDDRTVRLWDTS 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + + G V+F +G I +WD+ R L + V
Sbjct: 175 SHQCINIFTDYGGSATFVDFNSSG-------TCIASSGADNTIKIWDI-RTNKLIQHYKV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
C HP Y ++ S+ + I I L+ Y HG G + +FS D
Sbjct: 227 HNAGVNCFSFHPSGNYLISGSSDSTIKILDL-----LEGRLIYTLHGHKGPVLTVTFSRD 281
Query: 383 GEKLVSGSSDGSIYFYNCRSSEL 405
G+ SG +D + + L
Sbjct: 282 GDLFASGGADSQVLMWKTNFDSL 304
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L HT V +SP L+AS G D+++ +W+ S + + + + V ++
Sbjct: 139 SLNRHTNWVRCARFSPD-GRLIASCGDDRTVRLWDTSSH--QCINIFTDYGGSATFVDFN 195
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRL 258
G + S G D + ++ D+ Q ++ A V FHP + N +SG S +++
Sbjct: 196 SSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHP-SGNYLISGSSDSTIKI 254
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
D+ G++ + GP+L V F+ +G F
Sbjct: 255 LDLLEGRLIYTLHGHKGPVLTVTFSRDGDLF 285
Score = 135 (52.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 138 STALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVK 197
ST HT +V S+++S L +A D+S+ +W V R +K LN H+ V +
Sbjct: 95 STVFKAHTASVRSVHFS-RDGQRLVTASDDKSVKVWGV-ER-KKFLYSLNRHTNWVRCAR 151
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL-AVRVVKFHPENSNLFLSGGSKGLL 256
+S G + SCG D + RL D F + + V F+ + S G+ +
Sbjct: 152 FSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFN-SSGTCIASSGADNTI 210
Query: 257 RLWDIRTGKVAHEY 270
++WDIRT K+ Y
Sbjct: 211 KIWDIRTNKLIQHY 224
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 190 (71.9 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 75/309 (24%), Positives = 134/309 (43%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G L H ++ S+ ++P L ASA D +I IW++ + + L + L+ HS +V
Sbjct: 824 GELLQTFEGHPHSIWSVAFAPDGKEL-ASASDDSTIKIWDLATGE--LQQTLDSHSQSVR 880
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSK 253
V +S G + S D + ++ + G QS V+ V F P+ L SG K
Sbjct: 881 SVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKL-ASGSEK 939
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE 313
++LW+ TG++ + V F+ +GKQ I +W+ S
Sbjct: 940 NTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTT-------IKLWN-STT 991
Query: 314 VPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFS-STPPFRLDKFKRYESHGVSG 372
L + V P + V+ S+ N I ++ +T + + E H S
Sbjct: 992 GELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQ----QSLEDHSRSV 1047
Query: 373 FPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSC 432
+ +FS D ++L S S D +I ++ + EL+R ++ + Q V F P ++ S
Sbjct: 1048 HAV--AFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD-GKLLASN 1104
Query: 433 SWNGDVSVY 441
S++G + ++
Sbjct: 1105 SYDGTIKLW 1113
Score = 178 (67.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 75/290 (25%), Positives = 123/290 (42%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G L L H+++V S+ +SP LLAS+ +D +I +WN + + L + L S V
Sbjct: 866 GELQQTLDSHSQSVRSVAFSPD-GKLLASSSLDSTIKVWNPATGE--LQQSLEGRSGWVK 922
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSK 253
V +S G + S + +L + G Q+ +VR V F P+ L S S
Sbjct: 923 SVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL-ASSSSD 981
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE 313
++LW+ TG++ + I V F+ +GK I +WD++
Sbjct: 982 TTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNT-------IKLWDLATS 1034
Query: 314 VPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGF 373
L + + + + V P D + S + I ++ S L + S GV
Sbjct: 1035 -ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG-ELQRTLEGHSQGVRSV 1092
Query: 374 PIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
+FS DG+ L S S DG+I +N + EL++ + VAF P
Sbjct: 1093 ----TFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP 1138
Score = 178 (67.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 69/290 (23%), Positives = 127/290 (43%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G L L H+ V S+ +SP LLAS D +I +W+ S +L + H ++
Sbjct: 782 GELLQTLDGHSGTVESLAFSPD-GKLLASGSYDNTIDLWD--SATGELLQTFEGHPHSIW 838
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
V ++ G + S D + ++ D+ G Q+ +VR V F P+ L S
Sbjct: 839 SVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGK-LLASSSLD 897
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE 313
+++W+ TG++ G + V F+ +GK+ + +W+ +
Sbjct: 898 STIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNT-------VKLWNPATG 950
Query: 314 VPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGF 373
L + + + + V P + S+ I +++ST FK H + +
Sbjct: 951 -ELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK---GHDL--W 1004
Query: 374 PIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
+FS DG+ LVSGS D +I ++ +SEL++ ++ + ++ VAF P
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSP 1054
Score = 169 (64.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 71/290 (24%), Positives = 123/290 (42%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G L +L + V S+ +SP LAS ++ +WN + + L + L HS +V
Sbjct: 908 GELQQSLEGRSGWVKSVAFSPD-GKKLASGSEKNTVKLWNPATGE--LLQTLEGHSQSVR 964
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSK 253
V +S G + S D + +L + G Q+F+ +L +R V F P+ +L +SG
Sbjct: 965 SVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHL-VSGSDD 1023
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE 313
++LWD+ T ++ + V F+ + KQ I +WD S
Sbjct: 1024 NTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDST-------IKLWD-SAT 1075
Query: 314 VPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGF 373
L + + E ++ VR F P ++ +Y P L + G S +
Sbjct: 1076 GELQRTL--EGHS-QGVRSVTFSPDGKLLASNSYDGTIKLWNP--LTGELQQTLTGRSDW 1130
Query: 374 PIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
+FS DG++L SG D +I ++ + EL + ++ + V F P
Sbjct: 1131 VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP 1180
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 63/261 (24%), Positives = 108/261 (41%)
Query: 164 AGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGI 223
+G Q + WS +Q+ L H V V +S G ++S YD + ++ D G
Sbjct: 727 SGWSQLPKVEQTWSAEQQ---TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGE 783
Query: 224 ETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEF 282
Q+ V + F P+ L SG + LWD TG++ + I V F
Sbjct: 784 LLQTLDGHSGTVESLAFSPDGK-LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAF 842
Query: 283 TINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQ 342
+GK+ I +WD++ L + + + + V P +
Sbjct: 843 APDGKELASASDDST-------IKIWDLATG-ELQQTLDSHSQSVRSVAFSPDGKLLASS 894
Query: 343 SNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRS 402
S + I +++ P + + E G SG+ +FS DG+KL SGS ++ +N +
Sbjct: 895 SLDSTIKVWN---PATGELQQSLE--GRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPAT 949
Query: 403 SELERKIKAYEQACIDVAFHP 423
EL + ++ + Q+ VAF P
Sbjct: 950 GELLQTLEGHSQSVRSVAFSP 970
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 69/291 (23%), Positives = 123/291 (42%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G L H + ++ +SP HL++ + D +I +W++ + + L + L HS +V+
Sbjct: 992 GELQQTFKGHDLWIRAVAFSPDGKHLVSGSD-DNTIKLWDLATSE--LQQSLEDHSRSVH 1048
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFRE--ELAVRVVKFHPENSNLFLSGGS 252
V +S + S D + +L D G E Q E VR V F P+ L S
Sbjct: 1049 AVAFSPDDKQLASSSLDSTIKLWDSATG-ELQRTLEGHSQGVRSVTFSPDGK-LLASNSY 1106
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR 312
G ++LW+ TG++ + V F+ +GKQ I +WD +
Sbjct: 1107 DGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDST-------IKLWDSAT 1159
Query: 313 EVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSG 372
L +E ++ ++ F P ++G+Y P + + +E H S
Sbjct: 1160 GELLQT---LEGHS-DRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGH--SK 1213
Query: 373 FPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
+ +FS DG+ L S S +I ++ + EL + + +++ VAF P
Sbjct: 1214 WVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSP 1264
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 181 (68.8 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 39/122 (31%), Positives = 69/122 (56%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K+V + WSPT A + AS +DQSI IW++ + + HS+ VN + W++
Sbjct: 271 HSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNRTEP 330
Query: 204 FVLSCGYDCSSRLVDV---EKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLW 259
F+LS G D ++ D+ + G SF++ A V V++ P +S++F + G+ ++ W
Sbjct: 331 FILSGGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVISQW 390
Query: 260 DI 261
D+
Sbjct: 391 DL 392
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWN-----VWSRDQKLARVLNFHSAAVNDVKWSQQGLF 204
+I+WSP + S ++I +W W DQ R + HS +V D++WS
Sbjct: 230 AIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQ---RPFSSHSKSVEDLQWSPTEAT 286
Query: 205 VL-SCGYDCSSRLVDVEKGIETQSFREELA---VRVVKFHPENSNLFLSGGSKGLLRLWD 260
V SC D S R+ D+ + E V V+ ++ LSGG GLL++WD
Sbjct: 287 VFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWN-RTEPFILSGGDDGLLKVWD 345
Query: 261 IR---TGKVAHEYIQSLGPILDVEFT 283
+R +G+ + Q P+ V+++
Sbjct: 346 LRQFQSGRPVASFKQHSAPVTSVQWS 371
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 180 (68.4 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 39/124 (31%), Positives = 69/124 (55%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLN--FHSAAVNDVKWSQQ 201
HT++V + WSPT + AS D SI IW++ + K + H+ VN + WS+Q
Sbjct: 259 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQ 318
Query: 202 GLFVLSCGYDCSSRLVDVEK---GIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLR 257
F+LS G D + ++ D+ + G +F++ +A V V++HP++S +F + G+ +
Sbjct: 319 EPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQIT 378
Query: 258 LWDI 261
WD+
Sbjct: 379 QWDL 382
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 39/147 (26%), Positives = 65/147 (44%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNV-----WSRDQKLARVLNFHSAAVNDVKWSQ-QGL 203
+++WSP L + ++I +W W DQ R H+ +V D++WS +
Sbjct: 218 ALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQ---RPFVGHTRSVEDLQWSPTEDT 274
Query: 204 FVLSCGYDCSSRLVDVEKG-----IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
SC D S R+ D+ + T V V+ + + L LSGG G L++
Sbjct: 275 VFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPFL-LSGGDDGALKV 333
Query: 259 WDIR---TGKVAHEYIQSLGPILDVEF 282
WD+R +G + Q + P+ VE+
Sbjct: 334 WDLRQFKSGSPVATFKQHVAPVTSVEW 360
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 66/253 (26%), Positives = 107/253 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V S+ +SP +LLASA D+++ +W V R K + H+A V V +S G
Sbjct: 59 HKDVVTSLQFSP-QGNLLASASRDKTVRLW-VLDRKGKSSE-FKAHTAPVRSVDFSADGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
F+++ D S ++ + + S +R VR KF P+ L +S +++WD
Sbjct: 116 FLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTT 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + + S+G V+F+ NG + +WD+ R L + V
Sbjct: 175 SKQCVNNFSDSVGFANFVDFSPNG-------TCIASAGSDHAVRIWDI-RMNRLLQHYQV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ C+ HP V S+ + I RL Y G +G SFS D
Sbjct: 227 HSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEG-RLI----YTLQGHTGPVFTVSFSKD 281
Query: 383 GEKLVSGSSDGSI 395
GE SG +D +
Sbjct: 282 GELFTSGGADAQV 294
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA--V 193
R +L HT V +SP L+ S D++I IW+ S+ V NF +
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTSKQC----VNNFSDSVGFA 189
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGS 252
N V +S G + S G D + R+ D+ Q ++ V + FHP ++L ++ S
Sbjct: 190 NFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSL-VTASS 248
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
G +++ D+ G++ + GP+ V F+ +G+ F
Sbjct: 249 DGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELF 285
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/266 (22%), Positives = 109/266 (40%)
Query: 179 DQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVV 237
D L R H AA+ +S + + +D L ++ + + V +
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Query: 238 KFHPENSNLFLSGGSKGLLRLWDI-RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXX 296
+F P+ NL S +RLW + R GK + E+ P+ V+F+ +G QF
Sbjct: 67 QFSPQG-NLLASASRDKTVRLWVLDRKGK-SSEFKAHTAPVRSVDFSADG-QFLVTASED 123
Query: 297 XXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPP 356
I VW + R+ L +Y + C + P V+ S I I+ +T
Sbjct: 124 KS------IKVWSMYRQRFLYS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK 176
Query: 357 FRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQAC 416
++ F +S G + F FS +G + S SD ++ ++ R + L + + +
Sbjct: 177 QCVNNFS--DSVGFANF---VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGV 231
Query: 417 IDVAFHPILPNIIGSCSWNGDVSVYE 442
++FHP N + + S +G V + +
Sbjct: 232 NCLSFHPS-GNSLVTASSDGTVKILD 256
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 37/124 (29%), Positives = 69/124 (55%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQK--LARVLNFHSAAVNDVKWSQQ 201
HT++V + WSPT + AS D SI IW++ + K + + H VN + WS++
Sbjct: 254 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRR 313
Query: 202 GLFVLSCGYDCSSRLVDVEK---GIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLR 257
F+LS G D + ++ D+ + G +F++ +A + V++HP++S +F + G+ +
Sbjct: 314 EPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQIT 373
Query: 258 LWDI 261
WD+
Sbjct: 374 QWDL 377
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 40/147 (27%), Positives = 67/147 (45%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNV-----WSRDQKLARVLNFHSAAVNDVKWSQ-QGL 203
+++WSP + L + ++I +W W DQ R H+ +V D++WS +
Sbjct: 213 ALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQ---RPFMGHTRSVEDLQWSPTEDT 269
Query: 204 FVLSCGYDCSSRLVDVEKG-----IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
SC D S R+ D+ + T + + V V+ + L LSGG G L++
Sbjct: 270 VFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPFL-LSGGDDGALKI 328
Query: 259 WDIR---TGKVAHEYIQSLGPILDVEF 282
WD+R +G + Q + PI VE+
Sbjct: 329 WDLRQFKSGSPVATFKQHVAPITSVEW 355
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 66/266 (24%), Positives = 106/266 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H + S+ +SP +LLASA D++I +W R + + H+A V V +S G
Sbjct: 59 HKDVITSVQFSPL-GNLLASASRDRTIRLWIPDKRGK--SSEFKAHTAPVRSVDFSADGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
F+ S D S ++ ++ + S +R VR KF P+ L +S +++WD
Sbjct: 116 FLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTT 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + +G V F NG + +WD+ R L + V
Sbjct: 175 NKQCVNNFSDFVGFANFVAFNPNG-------TCIASAGSDHTVKIWDI-RVNKLLQHYQV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ CV HP Y + S+ + I L+ Y G +G SFS
Sbjct: 227 HSGGVNCVSFHPSGNYLITASSDGTLKILDL-----LEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 383 GEKLVSGSSDGSIYFYNCRSSELERK 408
GE SG +D + + EL K
Sbjct: 282 GELFTSGGADAQVLLWRTNFDELNYK 307
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 49/172 (28%), Positives = 78/172 (45%)
Query: 118 SLLRHLPKSHVRRSKIPGRL--STALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNV 175
+LL + R IP + S+ HT V S+++S LASA D+SI +WN+
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFS-ADGQFLASASEDKSIKVWNM 131
Query: 176 WSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-V 234
+ Q+ L H+ V K+S G ++SC D + ++ D +F + +
Sbjct: 132 YR--QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFA 189
Query: 235 RVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
V F+P N S GS +++WDIR K+ Y G + V F +G
Sbjct: 190 NFVAFNP-NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
R +L HT V +SP L+ S D++I IW+ ++ Q + +F A N
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNK-QCVNNFSDFVGFA-NF 191
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKG 254
V ++ G + S G D + ++ D+ Q ++ V V FHP + N ++ S G
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP-SGNYLITASSDG 250
Query: 255 LLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
L++ D+ G++ + GP+ V F+ G+ F
Sbjct: 251 TLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 285
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 63/269 (23%), Positives = 114/269 (42%)
Query: 179 DQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR---EELAVR 235
D L R H AA+ V +S G + + +D L + + ++FR + +
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRP--QARAFRYVGHKDVIT 64
Query: 236 VVKFHPENSNLFLSGGSKGLLRLW--DIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXX 293
V+F P NL S +RLW D R GK + E+ P+ V+F+ +G QF
Sbjct: 65 SVQFSPLG-NLLASASRDRTIRLWIPDKR-GK-SSEFKAHTAPVRSVDFSADG-QFLASA 120
Query: 294 XXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSS 353
I VW++ R+ L +Y + C + P V+ S I I+ +
Sbjct: 121 SEDKS------IKVWNMYRQRFLYS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 354 TPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYE 413
T ++ F + GF +F+ +G + S SD ++ ++ R ++L + + +
Sbjct: 174 TNKQCVNNFSDFV-----GFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHS 228
Query: 414 QACIDVAFHPILPNIIGSCSWNGDVSVYE 442
V+FHP N + + S +G + + +
Sbjct: 229 GGVNCVSFHPS-GNYLITASSDGTLKILD 256
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 67/266 (25%), Positives = 108/266 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V S+ +SP +LLASA D+++ +W V R K + H+A V V +S G
Sbjct: 59 HKDVVTSLQFSP-QGNLLASASRDRTVRLW-VLDRKGKSSE-FKAHTAPVRSVDFSADGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+++ D S ++ + + S +R VR KF P+ L +S +++WD
Sbjct: 116 LLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTT 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + S+G V+F NG + +WD+ R L + V
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNG-------TCIASAGSDHAVKIWDI-RMNKLLQHYQV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ C+ HP V S+ + + RL Y G +G SFS D
Sbjct: 227 HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG-RLI----YTLQGHTGPVFTVSFSKD 281
Query: 383 GEKLVSGSSDGSIYFYNCRSSELERK 408
GE L SG +D + + L K
Sbjct: 282 GELLTSGGADAQVLIWRTNFIHLHCK 307
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 58/266 (21%), Positives = 110/266 (41%)
Query: 179 DQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVV 237
D L R H AA+ +S + + +D L ++ + + V +
Sbjct: 7 DPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Query: 238 KFHPENSNLFLSGGSKGLLRLWDI-RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXX 296
+F P+ NL S +RLW + R GK + E+ P+ V+F+ +G+
Sbjct: 67 QFSPQG-NLLASASRDRTVRLWVLDRKGK-SSEFKAHTAPVRSVDFSADGQLLVTASEDK 124
Query: 297 XXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPP 356
I VW + R+ L +Y + C + P V+ S I I+ +T
Sbjct: 125 S-------IKVWSMFRQRFLYS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 357 FRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQAC 416
++ F +S G + F F+ +G + S SD ++ ++ R ++L + + +
Sbjct: 177 QCVNNFS--DSVGFANF---VDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGV 231
Query: 417 IDVAFHPILPNIIGSCSWNGDVSVYE 442
++FHP L N + + S +G V + +
Sbjct: 232 NCLSFHP-LGNSLVTASSDGTVKMLD 256
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 172 (65.6 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 62/253 (24%), Positives = 104/253 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +N+SP+ HLLAS D+++ IW + + + V H+A V V + G
Sbjct: 60 HKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQ 116
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+++ D + ++ + S + + VR KF P+ L +S ++LWD
Sbjct: 117 LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLWDKT 175
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + H Y + G + V+F +G + VWD +R L + +
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-------TCIAAAGMDNTVKVWD-TRTHRLVQHYQL 227
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP Y + S+ + + I RL Y HG G +FS
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEG-RL----LYTLHGHQGPATTVAFSRT 282
Query: 383 GEKLVSGSSDGSI 395
GE SG SD +
Sbjct: 283 GEYFASGGSDEQV 295
Score = 132 (51.5 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 69/282 (24%), Positives = 111/282 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +++S HL AS MD ++ IW++ + Q A H AV V +S G
Sbjct: 18 HRDAVTCVDFSLNTKHL-ASGSMDSTLMIWHM--KPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + R+ V KG E+ FR A VR V F + L + K +++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKG-ESTVFRAHTATVRSVHFCSDGQLLVTASDDK-TVKVWST 132
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWD-VSREVPLSKQV 320
+ Q + + +F+ +G+ + +WD SRE S
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT-------VKLWDKTSRECVHS--- 182
Query: 321 YVE-AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
Y E V HP A N + ++ T RL + Y+ H + + SF
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-TRTHRL--VQHYQLHSAAVNAL--SF 237
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
G L++ SSD ++ + L + ++ VAF
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
C H V +++ P+ +A+AGMD ++ +W+ +R +L + HSAAVN + +
Sbjct: 184 CEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWD--TRTHRLVQHYQLHSAAVNALSFHPS 240
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLW 259
G ++++ D + +++D+ +G + F SGGS + +W
Sbjct: 241 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
R +L H V +SP L+ SA D+++ +W+ SR+ H V
Sbjct: 136 RFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSRE--CVHSYCEHGGFVTY 192
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKG 254
V + G + + G D + ++ D Q ++ AV + FHP + N ++ S
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP-SGNYLITASSDS 251
Query: 255 LLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
L++ D+ G++ + GP V F+ G+ F
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQK--LARVLNFHSAAVNDVKWSQQ 201
HT++V + WSPT + AS D SI IW++ + K + H VN + WS++
Sbjct: 260 HTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRR 319
Query: 202 GLFVLSCGYDCSSRLVDVEK---GIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLR 257
F+LS G D + ++ D+ + G +F++ +A V V++HP++S +F + G+ +
Sbjct: 320 EPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQIT 379
Query: 258 LWDI 261
WD+
Sbjct: 380 QWDL 383
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 39/147 (26%), Positives = 66/147 (44%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNV-----WSRDQKLARVLNFHSAAVNDVKWSQ-QGL 203
+++WSP L + ++I +W W DQ R H+ +V D++WS +
Sbjct: 219 ALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQ---RPFVGHTRSVEDLQWSPTENT 275
Query: 204 FVLSCGYDCSSRLVDVEKG-----IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
SC D S R+ D+ + T + + V V+ + L LSGG G L++
Sbjct: 276 VFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFL-LSGGDDGALKI 334
Query: 259 WDIR---TGKVAHEYIQSLGPILDVEF 282
WD+R +G + Q + P+ VE+
Sbjct: 335 WDLRQFKSGSPVATFKQHVAPVTSVEW 361
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQK--LARVLNFHSAAVNDVKWSQQ 201
HT++V + WSPT + AS D SI IW++ + K + H VN + WS++
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRR 319
Query: 202 GLFVLSCGYDCSSRLVDVEK---GIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLR 257
F+LS G D + ++ D+ + G +F++ +A V V++HP++S +F + G+ +
Sbjct: 320 EPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQIT 379
Query: 258 LWDI 261
WD+
Sbjct: 380 QWDL 383
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNV-----WSRDQKLARVLNFHSAAVNDVKWSQ-QGL 203
+++WSP L + +++ +W W+ DQ R H+ +V D++WS +
Sbjct: 219 ALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQ---RPFVGHTRSVEDLQWSPTEDT 275
Query: 204 FVLSCGYDCSSRLVDVEKG-----IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
SC D S R+ D+ + T + + V V+ + L LSGG G L++
Sbjct: 276 VFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFL-LSGGDDGALKV 334
Query: 259 WDIR---TGKVAHEYIQSLGPILDVEF 282
WD+R +G + Q + P+ VE+
Sbjct: 335 WDLRQFKSGSPVATFKQHMAPVTSVEW 361
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/124 (30%), Positives = 67/124 (54%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQK--LARVLNFHSAAVNDVKWSQQ 201
HT++V + WSPT + AS D SI IW++ + K + H VN + WS +
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHR 319
Query: 202 GLFVLSCGYDCSSRLVDVEK---GIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLR 257
F+LS G D + ++ D+ + G +F++ +A V V++HP++S +F + G+ +
Sbjct: 320 EPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQIT 379
Query: 258 LWDI 261
WD+
Sbjct: 380 QWDL 383
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNV-----WSRDQKLARVLNFHSAAVNDVKWSQ-QGL 203
+++WSP L + ++I +W W DQ R H+ +V D++WS +
Sbjct: 219 ALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQ---RPFVGHTRSVEDLQWSPTEDT 275
Query: 204 FVLSCGYDCSSRLVDVEKG-----IETQSFREELAVRVVKF-HPENSNLFLSGGSKGLLR 257
SC D S R+ D+ + T + + V V+ + H E LSGG G L+
Sbjct: 276 VFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREP--FLLSGGDDGALK 333
Query: 258 LWDIR---TGKVAHEYIQSLGPILDVEF 282
+WD+R +G + Q + P+ VE+
Sbjct: 334 VWDLRQFKSGSPVATFKQHVAPVTSVEW 361
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 177 (67.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 79/348 (22%), Positives = 150/348 (43%)
Query: 94 PSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINW 153
P ++ A S+S + QD++ H P S + ++P S H VN++ +
Sbjct: 256 PVRAISRAATRRSVSSIPVPQDVVDT--H-PASG-KDVRVPTTASYVFDAHDGEVNAVQF 311
Query: 154 SPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCS 213
SP + LLA+ GMD+ + +W + + L+ +A + +++ G ++L+ D +
Sbjct: 312 SPG-SRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFA 370
Query: 214 SRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQ 272
SR+ V+ + V KF +N+ + +SG L+LWD+R+ KV E +Q
Sbjct: 371 SRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS-KVCEE-MQ 427
Query: 273 SLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIV---------VWDVSREVPLSKQVYVE 323
SL ++ F + K ++ WD+ E + + +
Sbjct: 428 SLCVLMTFAFLLGIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESVVREMELLG 487
Query: 324 AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCS----- 378
T + +P ++ S + + I R + K +S GF KC
Sbjct: 488 KITA--LDLNPERTELLSCSRDDLLKIID----LRTNAIK--QSFSAPGF--KCGSDWTR 537
Query: 379 --FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHP 423
FS DG + +GS+DGS+Y ++ + ++E+ + + I+ VA+ P
Sbjct: 538 VVFSPDGSYVAAGSADGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAP 585
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/248 (23%), Positives = 108/248 (43%)
Query: 189 HSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREE------LAVRVVKFHPE 242
H++ V V +S G + L+ G + S+++ DV+ G + +F +E L +R V F P+
Sbjct: 280 HNSVVCCVNFSNDGKY-LATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 243 NSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXX 302
N +G +++WDI T K+ H + I ++++ +G+ F
Sbjct: 339 G-NYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGR-FIVSGSGDKKAK-- 394
Query: 303 XXIVVWDVSR---EVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRL 359
+WD+ + L + V P A S N + ++ + + L
Sbjct: 395 ----IWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFL 450
Query: 360 DKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKA----YEQA 415
+ RYE H S + + +FS DG+ L SGS D S+ ++ S + +A ++
Sbjct: 451 E---RYEGHLDSVYSV--AFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 505
Query: 416 CIDVAFHP 423
+ VAF P
Sbjct: 506 VLSVAFSP 513
Score = 135 (52.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 35/145 (24%), Positives = 69/145 (47%)
Query: 148 VNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLS 207
+ S+ +SP + LA+ D+++ +W++ ++ K+ H + + +S G F++S
Sbjct: 330 IRSVCFSPD-GNYLATGAEDKTVKVWDIHTK--KIQHTFYGHELDIYSLDYSSDGRFIVS 386
Query: 208 CGYDCSSRLVDVEKG-----IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
D +++ D+EKG + + + V V P+ L +G ++RLWD +
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDG-RLVAAGSLDNIVRLWDAQ 445
Query: 263 TGKVAHEYIQSLGPILDVEFTINGK 287
TG Y L + V F+ +GK
Sbjct: 446 TGYFLERYEGHLDSVYSVAFSPDGK 470
Score = 88 (36.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 368 HGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
+G F + +FS DG L+SGS D S+ F++ R+ ++ ++ + I VA P
Sbjct: 500 NGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSP 555
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 171 (65.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 73/316 (23%), Positives = 129/316 (40%)
Query: 113 RQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICI 172
R + S LPK R S + + L H + + +S + LASAG DQ I +
Sbjct: 8 RNQMASQFLELPK---RTSSLMAP-TMVLQGHGGEIYTSQFS-SDGSFLASAGYDQQIFL 62
Query: 173 WNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL 232
WNV+ + A VL H A+ +VK++ ++S G D + R+ D+E G ++F+
Sbjct: 63 WNVFGECENFA-VLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHT 121
Query: 233 -AVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXX 291
V V + + S G + + D+R+ + A ++I ++ F
Sbjct: 122 DIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFI--------CKYQQTAVTFND 173
Query: 292 XXXXXXXXXXXXXIVVWDVSR-EVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAI 350
I VWD+ R +V + + T V H+ + ++ S +
Sbjct: 174 AADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHN--GNFLLSNSMDCSLMS 231
Query: 351 FSSTPPFRLDKF-KRYE--SHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELER 407
+ P + RY+ SH +KC +S + +GS+D +Y +N +S
Sbjct: 232 WDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKSRACVY 291
Query: 408 KIKAYEQACIDVAFHP 423
K+ + + A HP
Sbjct: 292 KLPGHLGSVNCTALHP 307
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 137 (53.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 48/158 (30%), Positives = 79/158 (50%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRD-QKLA-RVLNFHSAAVN 194
L L H VN + +S LLA+ D+SIC+++ SRD +L L+ H V+
Sbjct: 4 LICTLQSHRDDVNCVAFS---GDLLATCSADKSICVYS--SRDFSELPFSPLSGHGYGVH 58
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA---VRVVKFHPENSNLFLSGG 251
+S G ++ SC D ++ + ++ G E ++ E VRV F P++S+L +SGG
Sbjct: 59 CCCFSACGQYLASCSTDATTMVWSMDTG-EIEAVLEHPGRSPVRVCAFSPDSSHL-VSGG 116
Query: 252 SKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
S G + LWD + + + + I+ FT G+ F
Sbjct: 117 SDGSIALWDFTSRTLRRTGVVNDTSIVACSFTPCGQMF 154
Score = 83 (34.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 369 GVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNI 428
G S + C++S DG+ LVSGS D ++ Y L + +++ AF P P +
Sbjct: 237 GQSAPVLSCAYSPDGQMLVSGSVDKTVTVYQADEGVLLYTLHQHDRYVTACAFSPTAP-L 295
Query: 429 IGSCSWNGDVSVY 441
I + S + V+++
Sbjct: 296 IATGSMDKSVNIW 308
Score = 54 (24.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 375 IKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
+ CSF+ G+ ++GS+ G + ++ + L + A++ F P
Sbjct: 143 VACSFTPCGQMFITGSTYGDLRLWDLNMNHLHAEKNAHDLGVSCAQFAP 191
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 365 YESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRS-SELERKIKAYEQA 415
Y H + C+FS + +GS D S+ + S + ++ A E+A
Sbjct: 275 YTLHQHDRYVTACAFSPTAPLIATGSMDKSVNIWRMEEGSSAQGELFADEKA 326
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 172 (65.6 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 64/253 (25%), Positives = 103/253 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +N+SP+ HLLAS D+++ IW + + + V H+A V V + G
Sbjct: 91 HKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFCSDGQ 147
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ D + ++ + S + + VR KF P+ L +S ++LWD
Sbjct: 148 SFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLWDKT 206
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + H Y + G + V+F +G + VWDV R L + +
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSG-------TCVAAAGMDNTVKVWDV-RTHRLLQHYQL 258
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP Y V S+ + + I RL Y HG G +FS
Sbjct: 259 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG-RL----LYTLHGHQGPATTVAFSRT 313
Query: 383 GEKLVSGSSDGSI 395
GE SG SD +
Sbjct: 314 GEYFASGGSDEQV 326
Score = 124 (48.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L H V +SP L+ SA D+++ +W+ SR+ H V V +
Sbjct: 171 SLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSRE--CVHSYCEHGGFVTYVDFH 227
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G V + G D + ++ DV Q ++ AV + FHP + N ++ S L++
Sbjct: 228 PSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDSTLKI 286
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
D+ G++ + GP V F+ G+ F
Sbjct: 287 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 317
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
C H V +++ P+ +A+AGMD ++ +W+V R +L + HSAAVN + +
Sbjct: 215 CEHGGFVTYVDFHPSGT-CVAAAGMDNTVKVWDV--RTHRLLQHYQLHSAAVNALSFHPS 271
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLW 259
G ++++ D + +++D+ +G + F SGGS + +W
Sbjct: 272 GNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 67/282 (23%), Positives = 110/282 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +++S + LAS MD + +W++ + Q A H AV V +S G
Sbjct: 49 HRDAVTCVDFS-FNMKQLASGSMDSCLMVWHM--KPQSRAYRFTGHKDAVTCVNFSPSGH 105
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + R+ V KG E+ FR A VR V F + + F++ +++W
Sbjct: 106 LLASGSRDKTVRIWVPNIKG-ESTVFRAHTATVRSVHFCSDGQS-FVTASDDKTIKVWST 163
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWD-VSREVPLSKQV 320
K Q + + +F+ +G+ + +WD SRE S
Sbjct: 164 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT-------VKLWDKTSRECVHS--- 213
Query: 321 YVE-AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
Y E V HP A N + ++ RL + Y+ H + + SF
Sbjct: 214 YCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWD-VRTHRL--LQHYQLHSAAVNAL--SF 268
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
G LV+ SSD ++ + L + ++ VAF
Sbjct: 269 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 310
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 173 (66.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
HT++V + WSPT + AS D SI IW++ + K + H VN + WS++
Sbjct: 259 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRR 318
Query: 202 GLFVLSCGYDCSSRLVDVEK---GIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLR 257
F+LS G D + ++ D+ + G +F++ +A V V++HP++S +F + G+ +
Sbjct: 319 EPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQIT 378
Query: 258 LWDI 261
WD+
Sbjct: 379 QWDL 382
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNV-----WSRDQKLARVLNFHSAAVNDVKWSQ-QGL 203
+++WSP L + ++I +W W+ DQ R H+ +V D++WS +
Sbjct: 218 ALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQ---RPFVGHTRSVEDLQWSPTEDT 274
Query: 204 FVLSCGYDCSSRLVDVEKG-----IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
SC D S R+ D+ + T + + V V+ + L LSGG G L++
Sbjct: 275 VFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFL-LSGGDDGTLKV 333
Query: 259 WDIR---TGKVAHEYIQSLGPILDVEF 282
WD+R +G + Q + P+ VE+
Sbjct: 334 WDLRQFKSGSPVATFKQHVAPVTSVEW 360
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 172 (65.6 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 64/253 (25%), Positives = 103/253 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +N+SP+ HLLAS D+++ IW + + + V H+A V V + G
Sbjct: 60 HKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQ 116
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ D + ++ + S + + VR KF P+ L +S ++LWD
Sbjct: 117 SFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLWDKT 175
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + H Y + G + V+F +G + VWDV R L + +
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-------TCIAAAGMDNTVKVWDV-RTHRLLQHYQL 227
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP Y V S+ + + I RL Y HG G +FS
Sbjct: 228 HSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG-RL----LYTLHGHQGPATTVAFSRT 282
Query: 383 GEKLVSGSSDGSI 395
GE SG SD +
Sbjct: 283 GEYFASGGSDEQV 295
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 68/282 (24%), Positives = 111/282 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV S+++S + LAS MD + +W++ + Q A H AV V +S G
Sbjct: 18 HRDAVTSVDFS-LNTKQLASGSMDSCLMVWHM--KPQTRAYRFAGHKDAVTCVNFSPSGH 74
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + R+ V KG E+ FR A VR V F + + F++ +++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKG-ESTVFRAHTATVRSVHFCSDGQS-FVTASDDKTVKVWST 132
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWD-VSREVPLSKQV 320
K Q + + +F+ +G+ + +WD SRE S
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT-------VKLWDKTSRECVHS--- 182
Query: 321 YVE-AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
Y E V HP A N + ++ RL + Y+ H + + SF
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-VRTHRL--LQHYQLHSAAVNAL--SF 237
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
G LV+ SSD ++ + L + ++ VAF
Sbjct: 238 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
C H V +++ P+ +A+AGMD ++ +W+V R +L + HSAAVN + +
Sbjct: 184 CEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDV--RTHRLLQHYQLHSAAVNALSFHPS 240
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLW 259
G ++++ D + +++D+ +G + F SGGS + +W
Sbjct: 241 GNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 37/151 (24%), Positives = 66/151 (43%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L H V +SP L+ SA D+++ +W+ SR+ H V V +
Sbjct: 140 SLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSRE--CVHSYCEHGGFVTYVDFH 196
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G + + G D + ++ DV Q ++ AV + FHP + N ++ S L++
Sbjct: 197 PSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDSTLKI 255
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
D+ G++ + GP V F+ G+ F
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 80/321 (24%), Positives = 130/321 (40%)
Query: 81 GPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTA 140
GP +P +P ++ AA GS A +Q L L R S + +
Sbjct: 9 GPELPLVPVKRPRHELLLGAA---GSGPGAGQQQATPGAL--LQTGPPRCSSLQAPIML- 62
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V + P + LASAG D+ I +W+V+ A L HS AV ++ ++
Sbjct: 63 LSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWSVYGDCDNYA-TLKGHSGAVMELHYNT 120
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHP--ENSNLFLSGGSKGLLRL 258
G + S D + + D E G + + + V +P L +G G ++L
Sbjct: 121 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSF-VNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
WDIR K A + Q+ +L V F Q I VWD+ R+ L+
Sbjct: 180 WDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDND-------IKVWDL-RQNKLTY 230
Query: 319 QVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTP--PF-RLDKFKRYESHGVSGFPI 375
+ A + + Y ++ + N + ++ P P R K + H +
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLL 290
Query: 376 KCSFSLDGEKLVSGSSDGSIY 396
+CS+S DG K+ +GS+D +Y
Sbjct: 291 RCSWSPDGSKIAAGSADSFLY 311
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 171 (65.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 65/266 (24%), Positives = 107/266 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H V S+ +SP +LLASA D+++ +W R + + H+A V V +S G
Sbjct: 59 HKDVVTSVQFSPL-GNLLASASRDRTVRLWIPDKRGK--SSEFKAHTAPVRSVDFSADGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
F+ + D S ++ ++ + S +R VR KF P+ L +S +++WD
Sbjct: 116 FLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIWDTT 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + + S+G V+F NG + +WD+ R L + V
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNG-------TCIASAGSDHTVKIWDI-RVNKLLQHYQV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ CV HP Y + S+ + I L+ Y G +G SFS
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKILDL-----LEGRLIYTLQGHTGPVFTVSFSKG 281
Query: 383 GEKLVSGSSDGSIYFYNCRSSELERK 408
GE SG +D + + L K
Sbjct: 282 GELFSSGGADTQVLLWRTNFDYLNCK 307
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 118 SLLRHLPKSHVRRSKIPGRL--STALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNV 175
+LL + R IP + S+ HT V S+++S LA+A D+SI +WN+
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFS-ADGQFLATASEDKSIKVWNM 131
Query: 176 WSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-V 234
+ Q+ L H+ V K+S G ++SC D + ++ D +F + +
Sbjct: 132 YR--QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 235 RVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
V F+P N S GS +++WDIR K+ Y G + V F +G
Sbjct: 190 NFVDFNP-NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSG 240
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 66/272 (24%), Positives = 117/272 (43%)
Query: 176 WSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR---EEL 232
+ D L R H AA+ V +S G + + +D L + + + ++FR +
Sbjct: 4 FQEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKP--QARAFRYVGHKD 61
Query: 233 AVRVVKFHPENSNLFLSGGSKGLLRLW--DIRTGKVAHEYIQSLGPILDVEFTINGKQFX 290
V V+F P NL S +RLW D R GK + E+ P+ V+F+ +G QF
Sbjct: 62 VVTSVQFSPLG-NLLASASRDRTVRLWIPDKR-GK-SSEFKAHTAPVRSVDFSADG-QFL 117
Query: 291 XXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAI 350
I VW++ R+ L +Y + C + P V+ S I I
Sbjct: 118 ATASEDKS------IKVWNMYRQRFLYS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 351 FSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIK 410
+ +T ++ F +S G + F F+ +G + S SD ++ ++ R ++L + +
Sbjct: 171 WDTTNKQCVNNFS--DSVGFANF---VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQ 225
Query: 411 AYEQACIDVAFHPILPNIIGSCSWNGDVSVYE 442
+ V+FHP N I + S +G + + +
Sbjct: 226 VHSGGVNCVSFHPS-GNYIITASSDGTLKILD 256
Score = 135 (52.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA--V 193
R +L HT V +SP L+ S D++I IW+ ++ V NF +
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIKIWDTTNKQC----VNNFSDSVGFA 189
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGS 252
N V ++ G + S G D + ++ D+ Q ++ V V FHP + N ++ S
Sbjct: 190 NFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHP-SGNYIITASS 248
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
G L++ D+ G++ + GP+ V F+ G+ F
Sbjct: 249 DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELF 285
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 173 (66.0 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 51/154 (33%), Positives = 75/154 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P LLAS D ++ IW++ +RD + L HS + +KWS G
Sbjct: 533 HTNEVNAIKWCP-QGQLLASCSDDMTLKIWSM-NRD-RCCHDLQAHSKEIYTIKWSPTGP 589
Query: 203 --------LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGS 252
L + S +D + RL DVE+G I T + E V V F P+ +L SG
Sbjct: 590 GTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTE-PVYSVAFSPDGKHL-ASGSF 647
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W +TG++ H Y + G I +V + G
Sbjct: 648 DKCVHIWSTQTGQLVHSY-KGTGGIFEVCWNSKG 680
Score = 132 (51.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 39/164 (23%), Positives = 70/164 (42%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G+ + H+ ++W A AS DQ I + + + + H+ VN
Sbjct: 483 GQCTQQFAFHSAPALDVDWQTNQA--FASCSTDQRIHVCRLGVNEP--IKTFKGHTNEVN 538
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NS 244
+KW QG + SC D + ++ + + + Q+ +E + +K+ P N+
Sbjct: 539 AIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKE--IYTIKWSPTGPGTNNPNT 596
Query: 245 NLFLSGGS-KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
NL L+ S +RLWD+ G H + P+ V F+ +GK
Sbjct: 597 NLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGK 640
Score = 56 (24.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIK 410
+FS DG+ L SGS D ++ ++ ++ +L K
Sbjct: 634 AFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYK 666
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 169 (64.5 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 62/253 (24%), Positives = 104/253 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +N+SP+ HLLAS D+++ IW + + + V H+A V V + G
Sbjct: 60 HKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQ 116
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+++ D + ++ + S + + VR KF P+ L +S ++LWD
Sbjct: 117 SLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLWDKT 175
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + H Y + G + V+F +G + VWD +R L + +
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSG-------TCIAAAGMDNTVKVWD-ARTHRLLQHYQL 227
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP Y + S+ + + I RL Y HG G +FS
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDLMEG-RL----LYTLHGHQGPATTVAFSRT 282
Query: 383 GEKLVSGSSDGSI 395
GE SG SD +
Sbjct: 283 GEYFASGGSDEQV 295
Score = 133 (51.9 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 68/282 (24%), Positives = 112/282 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +++S HL AS MD ++ IW++ + Q A H AV V +S G
Sbjct: 18 HRDAVTCVDFSLNTKHL-ASGSMDSTLMIWHM--KPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + R+ V KG E+ FR A VR V F + +L + K +++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKG-ESTVFRAHTATVRSVHFCSDGQSLVTASDDK-TVKVWST 132
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWD-VSREVPLSKQV 320
+ Q + + +F+ +G+ + +WD SRE S
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT-------VKLWDKTSRECIHS--- 182
Query: 321 YVE-AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
Y E V HP A N + ++ + RL + Y+ H + + SF
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART-HRL--LQHYQLHSAAVNAL--SF 237
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
G L++ SSD ++ + L + ++ VAF
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
C H V +++ P+ +A+AGMD ++ +W+ +R +L + HSAAVN + +
Sbjct: 184 CEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWD--ARTHRLLQHYQLHSAAVNALSFHPS 240
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLW 259
G ++++ D + +++D+ +G + F SGGS + +W
Sbjct: 241 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/155 (23%), Positives = 66/155 (42%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
R +L H V +SP L+ SA D+++ +W+ SR+ H V
Sbjct: 136 RFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKTSRE--CIHSYCEHGGFVTY 192
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKG 254
V + G + + G D + ++ D Q ++ AV + FHP + N ++ S
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNYLITASSDS 251
Query: 255 LLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
L++ D+ G++ + GP V F+ G+ F
Sbjct: 252 TLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 169 (64.5 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 62/253 (24%), Positives = 104/253 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +N+SP+ HLLAS D+++ IW + + + V H+A V V + G
Sbjct: 60 HKDAVTCVNFSPS-GHLLASGSRDKTVRIWIPNVKGE--STVFRAHTATVRSVHFCSDGQ 116
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+++ D + ++ + S + + VR +F P+ L +S ++LWD
Sbjct: 117 SLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDG-RLIVSASDDKTVKLWDKT 175
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + H Y + G + V+F +G + VWDV R L + +
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-------TCIAAASMDNTVKVWDV-RTHRLLQHYQL 227
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP Y + S+ + + I RL Y HG G +FS
Sbjct: 228 HSAAVNALSFHPSGNYLLTASSDSTLKILDLMEG-RL----LYTLHGHQGPATTVAFSRT 282
Query: 383 GEKLVSGSSDGSI 395
GE SG SD +
Sbjct: 283 GEYFASGGSDEQV 295
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 67/282 (23%), Positives = 111/282 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H A+ S+++S + LAS MD + +W++ + Q A H AV V +S G
Sbjct: 18 HRDAITSVDFS-LNTKQLASGSMDSCLMVWHM--KPQSRAYRFAGHKDAVTCVNFSPSGH 74
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + R+ + KG E+ FR A VR V F + +L + K +++W
Sbjct: 75 LLASGSRDKTVRIWIPNVKG-ESTVFRAHTATVRSVHFCSDGQSLVTASDDK-TVKVWST 132
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWD-VSREVPLSKQV 320
K Q + + F+ +G+ + +WD SRE S
Sbjct: 133 HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKT-------VKLWDKTSRECVHS--- 182
Query: 321 YVE-AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
Y E V HP A S N + ++ RL + Y+ H + + SF
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWD-VRTHRL--LQHYQLHSAAVNAL--SF 237
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
G L++ SSD ++ + L + ++ VAF
Sbjct: 238 HPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
C H V +++ P+ +A+A MD ++ +W+V R +L + HSAAVN + +
Sbjct: 184 CEHGGFVTYVDFHPSGT-CIAAASMDNTVKVWDV--RTHRLLQHYQLHSAAVNALSFHPS 240
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLW 259
G ++L+ D + +++D+ +G + F SGGS + +W
Sbjct: 241 GNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/151 (24%), Positives = 65/151 (43%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L H V +SP L+ SA D+++ +W+ SR+ H V V +
Sbjct: 140 SLSQHINWVRCARFSPD-GRLIVSASDDKTVKLWDKTSRE--CVHSYCEHGGFVTYVDFH 196
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G + + D + ++ DV Q ++ AV + FHP + N L+ S L++
Sbjct: 197 PSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLLTASSDSTLKI 255
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
D+ G++ + GP V F+ G+ F
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + L HS + +KWS G
Sbjct: 358 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQDACVHDLQAHSKEIYTIKWSPTGP 414
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
+ + S +D + RL DVE+G+ T + + + V V F P+ L SG
Sbjct: 415 ATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYL-ASGSFD 473
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y Q G I +V + G
Sbjct: 474 KYVHIWNTQSGSLVHSY-QGTGGIFEVCWNARG 505
Score = 114 (45.2 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 35/155 (22%), Positives = 68/155 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D + + H+ VN +KW G+
Sbjct: 317 HSAPALDVDWQNNMT--FASCSTDMCIHVCRLGC-DHPV-KTFQGHTNEVNAIKWDPSGM 372
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P NS++ L+ S
Sbjct: 373 LLASCSDDMTLKIWSMKQDACVHDLQAHSKE--IYTIKWSPTGPATSNPNSSIMLASASF 430
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H ++ P+ V F+ +GK
Sbjct: 431 DSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGK 465
Score = 103 (41.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 42/166 (25%), Positives = 67/166 (40%)
Query: 132 KIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVW--SRDQKLARVLNF- 188
+IP +T L H V W+P + LLAS D + IWN+ S VL
Sbjct: 166 EIPPNKATVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC 224
Query: 189 -----HSAAVN-DVK---WSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKF 239
H N DV W+ G + YD +R+ + + + + + +K+
Sbjct: 225 IREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKW 284
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTIN 285
+ + N LS G +WD TG+ ++ P LDV++ N
Sbjct: 285 N-KKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 329
Score = 58 (25.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+FS DG+ L SGS D ++ +N +S L
Sbjct: 459 AFSPDGKYLASGSFDKYVHIWNTQSGSL 486
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 125 (49.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 46/153 (30%), Positives = 73/153 (47%)
Query: 124 PKSHVRRSKIPGRL-STALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKL 182
P+ + ++P L T C AV ++ ++ +LL + G D+S+ +W+V SR L
Sbjct: 4 PQPRPQAPQLPQHLWRTVDCQQG-AVRAVRFNADGNYLL-TCGSDKSLKLWSV-SRGT-L 59
Query: 183 ARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHP 241
+ + H V D S + SC D + L DV G T+ R V V+F+
Sbjct: 60 LKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFN- 118
Query: 242 ENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSL 274
E + + LSG G +R WD R+ ++ E IQ L
Sbjct: 119 EEATVMLSGSIDGTVRCWDTRSRRM--EPIQIL 149
Score = 106 (42.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 161 LASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVE 220
L S D+++ +W+V S ++ R L H+ VN V+++++ +LS D + R D
Sbjct: 82 LCSCSSDKTVILWDVASG--QVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTR 139
Query: 221 -KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILD 279
+ +E +E + L L+G G +R +D+R G++ +YI S PI
Sbjct: 140 SRRMEPIQILDESQDGISSLKVSEHEL-LTGSVDGRVRRYDLRMGQLQVDYIGS--PITC 196
Query: 280 VEFTINGK 287
V F+ +G+
Sbjct: 197 VCFSRDGQ 204
Score = 84 (34.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 365 YESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPI 424
Y H G+ + C + ++S S DG +Y+++ L K+ + ++FHP
Sbjct: 229 YSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPT 288
Query: 425 LPNIIGSCSWNGDVSVY 441
P ++ S G V V+
Sbjct: 289 EPRLL--TSMEGRVQVW 303
Score = 50 (22.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 372 GFPIKC-SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
G PI C FS DG+ +S S D ++ + + E+
Sbjct: 191 GSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEM 225
>ZFIN|ZDB-GENE-030131-6176 [details] [associations]
symbol:mlst8 "MTOR associated protein, LST8
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-6176 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 KO:K08266 CTD:64223
GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 EMBL:BC044176 EMBL:BC068352
IPI:IPI00508476 RefSeq:NP_956171.1 UniGene:Dr.7298
ProteinModelPortal:Q803V5 STRING:Q803V5 Ensembl:ENSDART00000012743
Ensembl:ENSDART00000148326 GeneID:792689 KEGG:dre:792689
InParanoid:Q803V5 OMA:NNKGNCY NextBio:20931153 ArrayExpress:Q803V5
Bgee:Q803V5 Uniprot:Q803V5
Length = 326
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 65/296 (21%), Positives = 133/296 (44%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VNS+ +P + ++A+AG Q I ++++ S + V+N+ + N V + +
Sbjct: 40 HQDSQVNSLEVTPDRS-MIAAAGY-QHIRMYDLNSNNPN--PVINYDGVSKNITSVGFHE 95
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC +R+ D+ + ++ Q F+ + V HP + L + G G++ +
Sbjct: 96 DGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV-GDQSGVIHI 154
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T ++ + L P DV ++N VW +V
Sbjct: 155 WDLKT-----DHNEQLIPEPDV--SVNSVHIDPDASYMAAVNSSGNCYVWNLAGGMGDEV 207
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGV 370
++ +P +K + Y+ C + P D +A + + T F L +S+
Sbjct: 208 TQLIPKTKIPAHKRYSLRC-KFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNP 265
Query: 371 S----GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 266 GETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFN 321
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + L HS + +KWS G
Sbjct: 358 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQDACVHDLQAHSKEIYTIKWSPTGP 414
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
+ + S +D + RL DVE+G+ T + + + V + F P+ L SG
Sbjct: 415 ATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYL-ASGSFD 473
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y Q G I +V + G
Sbjct: 474 KCVHIWNTQSGSLVHSY-QGTGGIFEVCWNARG 505
Score = 115 (45.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 35/155 (22%), Positives = 68/155 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS G D I + + D + + H+ VN +KW G+
Sbjct: 317 HSAPALDVDWQNNTT--FASCGTDMCIHVCRLGC-DLPV-KTFQGHTNEVNAIKWDPSGM 372
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P NS++ L+ S
Sbjct: 373 LLASCSDDMTLKIWSMKQDACVHDLQAHSKE--IYTIKWSPTGPATSNPNSSIMLASASF 430
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ + F+ +GK
Sbjct: 431 DSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGK 465
Score = 110 (43.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 62/243 (25%), Positives = 96/243 (39%)
Query: 56 QQHSGLRTEASVAGRYMSKRERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQD 115
QQ S TEAS M+K A + PAA + P + A V G + A+
Sbjct: 106 QQASAAATEASA----MAKA--ATM---TPAAISQQNPPK--IREATVNGEENGAH---- 150
Query: 116 ILSLLRHLPKSHVRRS-KIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWN 174
+ H + R +IP +T L H V W+P + LLAS D + IWN
Sbjct: 151 --EINNHSKPMEIDRDVEIPPNKATVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWN 207
Query: 175 VW--SRDQKLARVLN------FHSAAVN-DVK---WSQQGLFVLSCGYDCSSRLVDVEKG 222
+ S VL +H N DV W+ G + YD +R+
Sbjct: 208 LNENSNGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGN 267
Query: 223 IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEF 282
+ + + + + +K++ + N LS G +WD TG+ ++ P LDV++
Sbjct: 268 LASTLGQHKGPIFALKWN-KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 326
Query: 283 TIN 285
N
Sbjct: 327 QNN 329
Score = 59 (25.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+FS DG+ L SGS D ++ +N +S L
Sbjct: 459 AFSPDGKYLASGSFDKCVHIWNTQSGSL 486
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 63/253 (24%), Positives = 103/253 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +N+SP+ HLLAS D+++ IW + + + V H+A V V + G
Sbjct: 22 HKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQ 78
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ D + ++ + S + + VR KF P+ L +S ++LWD
Sbjct: 79 SFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLWDKS 137
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + H Y + G + V+F +G + VWDV R L + +
Sbjct: 138 SRECVHSYCEHGGFVTYVDFHPSG-------TCIAAAGMDNTVKVWDV-RTHRLLQHYQL 189
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP Y + S+ + + I RL Y HG G +FS
Sbjct: 190 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG-RL----LYTLHGHQGPATTVAFSRT 244
Query: 383 GEKLVSGSSDGSI 395
GE SG SD +
Sbjct: 245 GEYFASGGSDEQV 257
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
C H V +++ P+ +A+AGMD ++ +W+V R +L + HSAAVN + +
Sbjct: 146 CEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDV--RTHRLLQHYQLHSAAVNGLSFHPS 202
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDI 261
G ++++ D + +++D+ +G + F SGGS + +W
Sbjct: 203 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 262
Query: 262 RTGKVAH 268
V H
Sbjct: 263 NFDIVDH 269
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 37/151 (24%), Positives = 66/151 (43%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L H V +SP L+ SA D+++ +W+ SR+ H V V +
Sbjct: 102 SLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKSSRE--CVHSYCEHGGFVTYVDFH 158
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G + + G D + ++ DV Q ++ AV + FHP + N ++ S L++
Sbjct: 159 PSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITASSDSTLKI 217
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
D+ G++ + GP V F+ G+ F
Sbjct: 218 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 248
>UNIPROTKB|B8ZZF2 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511 EMBL:AC008277
HGNC:HGNC:26697 IPI:IPI00915918 ProteinModelPortal:B8ZZF2
SMR:B8ZZF2 Ensembl:ENST00000409124 ArrayExpress:B8ZZF2 Bgee:B8ZZF2
Uniprot:B8ZZF2
Length = 429
Score = 167 (63.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 77/303 (25%), Positives = 130/303 (42%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
+L L H VN +S + LLA+ +D++I ++++ + L FH+ AV+
Sbjct: 3 KLIHTLADHGDDVNCCAFSFS---LLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHC 59
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA---VRVVKFHPENSNLFLSGGS 252
+S G + SC D ++ L + E G + + E+ + VRV +F P+++ L SG +
Sbjct: 60 CCFSPSGHILASCSTDGTTVLWNTENG-QMLAVMEQPSGSPVRVCQFSPDSTCL-ASGAA 117
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR 312
G + LW+ ++ K+ G + F+ NG F + VWD
Sbjct: 118 DGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGD-------LTVWDDKM 170
Query: 313 EVPLSKQVYVEAYTCPCVRHHPFDP------YFVAQSNGN------YIAIFSSTPPFRLD 360
P S++ + TC P +F S G +I F+ F L
Sbjct: 171 RCPHSEKAHDLGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFEL- 229
Query: 361 KFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVA 420
K+K S G + C+FS DG+ LVSGS D S+ Y+ + + + + + A
Sbjct: 230 KYKSTLS-GHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCA 288
Query: 421 FHP 423
F P
Sbjct: 289 FAP 291
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 63/253 (24%), Positives = 103/253 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +N+SP+ HLLAS D+++ IW + + + V H+A V V + G
Sbjct: 60 HKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQ 116
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++ D + ++ + S + + VR KF P+ L +S ++LWD
Sbjct: 117 SFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLWDKS 175
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ + H Y + G + V+F +G + VWDV R L + +
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSG-------TCIAAAGMDNTVKVWDV-RTHRLLQHYQL 227
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP Y + S+ + + I RL Y HG G +FS
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG-RL----LYTLHGHQGPATTVAFSRT 282
Query: 383 GEKLVSGSSDGSI 395
GE SG SD +
Sbjct: 283 GEYFASGGSDEQV 295
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 142 CHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ 201
C H V +++ P+ +A+AGMD ++ +W+V R +L + HSAAVN + +
Sbjct: 184 CEHGGFVTYVDFHPSGT-CIAAAGMDNTVKVWDV--RTHRLLQHYQLHSAAVNGLSFHPS 240
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDI 261
G ++++ D + +++D+ +G + F SGGS + +W
Sbjct: 241 GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Query: 262 RTGKVAH 268
V H
Sbjct: 301 NFDIVDH 307
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 67/282 (23%), Positives = 110/282 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV +++S + LAS MD + +W++ + Q A H AV V +S G
Sbjct: 18 HRDAVTCVDFS-INTKQLASGSMDSCLMVWHM--KPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + R+ V KG E+ FR A VR V F + + F++ +++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKG-ESTVFRAHTATVRSVHFCSDGQS-FVTASDDKTVKVWAT 132
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVS-REVPLSKQV 320
K Q + + +F+ +G+ + +WD S RE S
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT-------VKLWDKSSRECVHS--- 182
Query: 321 YVE-AYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
Y E V HP A N + ++ RL + + S V+G SF
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-VRTHRLLQHYQLHSAAVNGL----SF 237
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
G L++ SSD ++ + L + ++ VAF
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAF 279
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 37/151 (24%), Positives = 66/151 (43%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L H V +SP L+ SA D+++ +W+ SR+ H V V +
Sbjct: 140 SLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDKSSRE--CVHSYCEHGGFVTYVDFH 196
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G + + G D + ++ DV Q ++ AV + FHP + N ++ S L++
Sbjct: 197 PSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITASSDSTLKI 255
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQF 289
D+ G++ + GP V F+ G+ F
Sbjct: 256 LDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 80/323 (24%), Positives = 143/323 (44%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
+L L H VN +S + LLA+ +D++I ++++ + L FH+ AV+
Sbjct: 3 KLIHTLADHGDDVNCCAFSSS---LLATCSLDKTIRLYSLSDFTELPHSPLKFHTYAVHC 59
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA---VRVVKFHPENSNLFLSGGS 252
+S G + SC D ++ L + + G ET + E+ VRV +F P+++ L +SG +
Sbjct: 60 CCFSPSGHVLASCSTDGTTVLWNTQNG-ETLAVMEQPTGSPVRVCQFSPDSTCL-VSGAA 117
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR 312
G + LW+ ++ K+ G ++ F+ NG F I VWD
Sbjct: 118 DGTVVLWNAQSYKLYRCGSVKDGSLVACAFSPNGNFFVTGSSCGD-------ITVWDDKM 170
Query: 313 EVPLSKQVYVEAYTCPCVRHHPFDP------YFVAQSNGN------YIAIFSSTPPFRLD 360
S++ + TC P +F S G ++ F+ F L
Sbjct: 171 RCLHSEKAHDLGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQIKIWVVSFTHILGFEL- 229
Query: 361 KFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVA 420
K+K S G + C+FS +G+ LVSGS D S+ Y+ + + + + + A
Sbjct: 230 KYKSTLS-GHCAPVLACAFSHNGQMLVSGSVDKSVIVYDTNTETILHTLTQHTRYVTSCA 288
Query: 421 FHP-ILPNIIGSCSWNGDVSVYE 442
F P IL ++ + S + V++++
Sbjct: 289 FAPNIL--LLATGSMDKTVNIWQ 309
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 77/303 (25%), Positives = 130/303 (42%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
+L L H VN +S + LLA+ +D++I ++++ + L FH+ AV+
Sbjct: 3 KLIHTLADHGDDVNCCAFSFS---LLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHC 59
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA---VRVVKFHPENSNLFLSGGS 252
+S G + SC D ++ L + E G + + E+ + VRV +F P+++ L SG +
Sbjct: 60 CCFSPSGHILASCSTDGTTVLWNTENG-QMLAVMEQPSGSPVRVCQFSPDSTCL-ASGAA 117
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR 312
G + LW+ ++ K+ G + F+ NG F + VWD
Sbjct: 118 DGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGD-------LTVWDDKM 170
Query: 313 EVPLSKQVYVEAYTCPCVRHHPFDP------YFVAQSNGN------YIAIFSSTPPFRLD 360
P S++ + TC P +F S G +I F+ F L
Sbjct: 171 RCPHSEKAHDLGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFEL- 229
Query: 361 KFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVA 420
K+K S G + C+FS DG+ LVSGS D S+ Y+ + + + + + A
Sbjct: 230 KYKSTLS-GHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCA 288
Query: 421 FHP 423
F P
Sbjct: 289 FAP 291
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 132 (51.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 46/175 (26%), Positives = 86/175 (49%)
Query: 100 AAQVLGSISDAYLRQDILSLL--RHLPKSHVRRSKIPGRLSTALC---HHTKAVNSINWS 154
A +L SI++ + R+ + S + + H SK +TA+C H VN++ +S
Sbjct: 272 AGGLLDSITNIFGRRSLSSFPPPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFS 331
Query: 155 PTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSS 214
P + LLA+ GMD+ + +W V + L+ +A + +++ G ++L+ D +S
Sbjct: 332 PG-SRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFAS 390
Query: 215 RLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAH 268
R+ V+ + V KF +N+ + +SG L+LWD+R+ KV +
Sbjct: 391 RIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS-KVCN 443
Score = 84 (34.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 148 VNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLS 207
+ SI + ++LLA++ D + IW V D +L L HS V K+ ++S
Sbjct: 369 ITSIEFDSAGSYLLAASN-DFASRIWTV--DDNRLRHTLTGHSGKVLSAKFLLDNARIVS 425
Query: 208 CGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVA 267
+D + +L D+ + + + A +SG +R WDIRT +
Sbjct: 426 GSHDRTLKLWDLRSKV--CNIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESIV 483
Query: 268 HEYIQSLGPI 277
E ++ LG I
Sbjct: 484 KE-LELLGRI 492
Score = 83 (34.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHPILPNII 429
FS DG + +GS+DG++Y +N + +LER + + + I+ VA+ P +++
Sbjct: 543 FSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSPAGAHVV 594
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 120 (47.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 42/155 (27%), Positives = 71/155 (45%)
Query: 131 SKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHS 190
+++P + + L H AV + ++ + L + G D++I +WN L + H
Sbjct: 4 TELPTKEAHILKGHEGAVLAARFNGDGNYAL-TCGKDRTIRLWN--PHRGILIKTYKSHG 60
Query: 191 AAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLS 249
V DV + SCG D DV G + FR + V VKF+ ++S++ +S
Sbjct: 61 REVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFN-DSSSVVVS 119
Query: 250 GGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTI 284
G LR+WD R+ V E +Q + LD ++
Sbjct: 120 AGFDRSLRVWDCRSHSV--EPVQIIDTFLDTVMSV 152
Score = 95 (38.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 34/145 (23%), Positives = 65/145 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H + V ++ + +A S G D+ + W+V + ++ R H VN VK++
Sbjct: 59 HGREVRDVHVTSDNAKF-CSCGGDRQVYYWDVSTG--RVIRKFRGHDGEVNAVKFNDSSS 115
Query: 204 FVLSCGYDCSSRLVDVEK-GIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
V+S G+D S R+ D +E + V+ + + + G G +R +D+R
Sbjct: 116 VVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEI-IGGSVDGTVRTFDMR 174
Query: 263 TGKVAHEYIQSLG-PILDVEFTING 286
G+ E +LG P+ + + +G
Sbjct: 175 IGR---EMSDNLGQPVNCISISNDG 196
Score = 86 (35.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 365 YESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPI 424
Y+ H F C + ++ GS DG ++F++ +++ K +A++ V++HP
Sbjct: 222 YKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPK 281
Query: 425 LPNIIGSCSWNGDVSVYE 442
++ S S +G + V++
Sbjct: 282 EDCMLTS-SVDGTIRVWK 298
Score = 48 (22.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 372 GFPIKC-SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAY 412
G P+ C S S DG +++G D ++ + + EL + K +
Sbjct: 184 GQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W PT +LLAS D ++ IW++ + L H+ + +KWS G
Sbjct: 348 HTNEVNAIKWDPT-GNLLASCSDDMTLKIWSM--KQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
L + S +D + RL DV++GI + + + V V F P+ L SG
Sbjct: 405 GTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASGSFD 463
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDV 280
+ +W+ +TG + H Y + G I +V
Sbjct: 464 KCVHIWNTQTGALVHSY-RGTGGIFEV 489
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W++D LA L H + +KW+++G F+
Sbjct: 226 KDVTSLDWN-SEGTLLATGSYDGFA---RIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQF 304
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W + AS D I + + +D+ + + H+ VN +KW G
Sbjct: 307 HSAPALDVDWQSNNT--FASCSTDMCIHVCKL-GQDRPI-KTFQGHTNEVNAIKWDPTGN 362
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P N+NL L+ S
Sbjct: 363 LLASCSDDMTLKIWSMKQDNCVHDLQAHNKE--IYTIKWSPTGPGTNNPNANLMLASASF 420
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +G+
Sbjct: 421 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGR 455
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS DG L SGS D ++ +N ++ L + +V ++ + +G+ + +G
Sbjct: 449 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAA-GDKVGASASDGS 506
Query: 438 VSVYE 442
V V +
Sbjct: 507 VCVLD 511
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W PT +LLAS D ++ IW++ + L H+ + +KWS G
Sbjct: 348 HTNEVNAIKWDPT-GNLLASCSDDMTLKIWSM--KQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
L + S +D + RL DV++GI + + + V V F P+ L SG
Sbjct: 405 GTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASGSFD 463
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDV 280
+ +W+ +TG + H Y + G I +V
Sbjct: 464 KCVHIWNTQTGALVHSY-RGTGGIFEV 489
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W++D LA L H + +KW+++G F+
Sbjct: 226 KDVTSLDWN-SEGTLLATGSYDGFA---RIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQF 304
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W + AS D I + + +D+ + + H+ VN +KW G
Sbjct: 307 HSAPALDVDWQSNNT--FASCSTDMCIHVCKL-GQDRPI-KTFQGHTNEVNAIKWDPTGN 362
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P N+NL L+ S
Sbjct: 363 LLASCSDDMTLKIWSMKQDNCVHDLQAHNKE--IYTIKWSPTGPGTNNPNANLMLASASF 420
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +G+
Sbjct: 421 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGR 455
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS DG L SGS D ++ +N ++ L + +V ++ + +G+ + +G
Sbjct: 449 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAA-GDKVGASASDGS 506
Query: 438 VSVYE 442
V V +
Sbjct: 507 VCVLD 511
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W PT +LLAS D ++ IW++ + L H+ + +KWS G
Sbjct: 348 HTNEVNAIKWDPT-GNLLASCSDDMTLKIWSM--KQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
L + S +D + RL DV++GI + + + V V F P+ L SG
Sbjct: 405 GTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASGSFD 463
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDV 280
+ +W+ +TG + H Y + G I +V
Sbjct: 464 KCVHIWNTQTGALVHSY-RGTGGIFEV 489
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W++D LA L H + +KW+++G F+
Sbjct: 226 KDVTSLDWN-SEGTLLATGSYDGFA---RIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQF 304
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W + AS D I + + +D+ + + H+ VN +KW G
Sbjct: 307 HSAPALDVDWQSNNT--FASCSTDMCIHVCKL-GQDRPI-KTFQGHTNEVNAIKWDPTGN 362
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P N+NL L+ S
Sbjct: 363 LLASCSDDMTLKIWSMKQDNCVHDLQAHNKE--IYTIKWSPTGPGTNNPNANLMLASASF 420
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +G+
Sbjct: 421 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGR 455
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS DG L SGS D ++ +N ++ L + +V ++ + +G+ + +G
Sbjct: 449 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAA-GDKVGASASDGS 506
Query: 438 VSVYE 442
V V +
Sbjct: 507 VCVLD 511
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W PT +LLAS D ++ IW++ + L H+ + +KWS G
Sbjct: 348 HTNEVNAIKWDPT-GNLLASCSDDMTLKIWSM--KQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
L + S +D + RL DV++GI + + + V V F P+ L SG
Sbjct: 405 GTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASGSFD 463
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDV 280
+ +W+ +TG + H Y + G I +V
Sbjct: 464 KCVHIWNTQTGALVHSY-RGTGGIFEV 489
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W++D LA L H + +KW+++G F+
Sbjct: 226 KDVTSLDWN-SEGTLLATGSYDGFA---RIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQF 304
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W + AS D I + + +D+ + + H+ VN +KW G
Sbjct: 307 HSAPALDVDWQSNNT--FASCSTDMCIHVCKL-GQDRPI-KTFQGHTNEVNAIKWDPTGN 362
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P N+NL L+ S
Sbjct: 363 LLASCSDDMTLKIWSMKQDNCVHDLQAHNKE--IYTIKWSPTGPGTNNPNANLMLASASF 420
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +G+
Sbjct: 421 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGR 455
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS DG L SGS D ++ +N ++ L + +V ++ + +G+ + +G
Sbjct: 449 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAA-GDKVGASASDGS 506
Query: 438 VSVYE 442
V V +
Sbjct: 507 VCVLD 511
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 45/147 (30%), Positives = 71/147 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W PT +LLAS D ++ IW++ + L H+ + +KWS G
Sbjct: 348 HTNEVNAIKWDPT-GNLLASCSDDMTLKIWSM--KQDNCVHDLQAHNKEIYTIKWSPTGP 404
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
L + S +D + RL DV++GI + + + V V F P+ L SG
Sbjct: 405 GTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASGSFD 463
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDV 280
+ +W+ +TG + H Y + G I +V
Sbjct: 464 KCVHIWNTQTGALVHSY-RGTGGIFEV 489
Score = 112 (44.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W + AS D I + + +D+ + + H+ VN +KW G
Sbjct: 307 HSAPALDVDWQSNNT--FASCSTDMCIHVCKL-GQDRPI-KTFQGHTNEVNAIKWDPTGN 362
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P N+NL L+ S
Sbjct: 363 LLASCSDDMTLKIWSMKQDNCVHDLQAHNKE--IYTIKWSPTGPGTSNPNANLMLASASF 420
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +G+
Sbjct: 421 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGR 455
Score = 111 (44.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W++D LA L H + +KW+++G F+
Sbjct: 226 KDVTSLDWN-SEGTLLATGSYDGFA---RIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQLF 304
Score = 55 (24.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS DG L SGS D ++ +N ++ L + +V ++ + +G+ + +G
Sbjct: 449 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAA-GDKVGASASDGS 506
Query: 438 VSVYE 442
V V +
Sbjct: 507 VCVLD 511
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 166 (63.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + L H + +KWS G
Sbjct: 354 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQDACVHNLQAHRKEIYTIKWSPTGP 410
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSFRE-ELAVRVVKFHPENSNLFLSGGSK 253
+ + S +D + RL D+E+G+ T + R+ + V V F P+ L SG
Sbjct: 411 TTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYL-ASGSFD 469
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y Q G I +V + G
Sbjct: 470 KCVHIWNTQSGSLVHSY-QGTGGIFEVCWNAQG 501
Score = 113 (44.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D+ + + H+ VN +KW G+
Sbjct: 313 HSAPALDVDWQNNTT--FASCSTDMCIHVCRLGC-DRPV-KTFQGHTNEVNAIKWDPSGM 368
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ Q+ R+E + +K+ P NS++ L+ S
Sbjct: 369 LLASCSDDMTLKIWSMKQDACVHNLQAHRKE--IYTIKWSPTGPTTSNPNSSIMLASASF 426
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +GK
Sbjct: 427 DSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGK 461
Score = 109 (43.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/166 (24%), Positives = 69/166 (41%)
Query: 132 KIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLAR--VLNF- 188
+IP +T L H V W+P + LLAS D + IWN+ + + VL
Sbjct: 162 EIPPNKATVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENGSRASTQLVLRHC 220
Query: 189 -----HSAAVN-DVK---WSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKF 239
H N DV W+ G + + YD +R+ + + + + + +K+
Sbjct: 221 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLASTLGQHKGPIFALKW 280
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTIN 285
+ + N LS G +WD TG+ ++ P LDV++ N
Sbjct: 281 N-KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 325
Score = 59 (25.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+FS DG+ L SGS D ++ +N +S L
Sbjct: 455 AFSPDGKYLASGSFDKCVHIWNTQSGSL 482
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 140 (54.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 45/172 (26%), Positives = 86/172 (50%)
Query: 100 AAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKIPGRL----STALC---HHTKAVNSIN 152
A +L SI++ + R+ + S +P+ +V G+ +TALC H VN++
Sbjct: 272 AGGLLDSITNIFGRRSVSSF--PVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQ 329
Query: 153 WSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDC 212
+SP + LLA+ GMD+ + +W V+ + L+ +A + +++ G ++L+ D
Sbjct: 330 FSPG-SRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDF 388
Query: 213 SSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
+SR+ V+ + V KF +N+ + +SG L+LWD+R+
Sbjct: 389 ASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS 439
Score = 70 (29.7 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHP 423
FS DG + +GS++GS+Y ++ + ++E+ + + I+ VA+ P
Sbjct: 542 FSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSP 587
Score = 40 (19.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 386 LVSGSSDGSIYFYNCRSSELERKIK 410
++SG D I F++ RS + R+++
Sbjct: 462 VMSGHFDKKIRFWDIRSESIVREME 486
>UNIPROTKB|F1NAZ4 [details] [associations]
symbol:MLST8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0050731 "positive regulation of
peptidyl-tyrosine phosphorylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 GO:GO:0032008 GeneTree:ENSGT00390000014795
OMA:NNKGNCY EMBL:AADN02023651 IPI:IPI00592090
Ensembl:ENSGALT00000009446 Uniprot:F1NAZ4
Length = 327
Score = 159 (61.0 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 63/296 (21%), Positives = 130/296 (43%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VN++ +P + ++A+AG Q I ++++ S + V+N+ + N V + +
Sbjct: 41 HQDSQVNALEITPDRS-MIAAAGY-QHIRMYDLNSNNPN--PVINYDGVSKNITSVGFHE 96
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC +R+ D+ + ++ Q F+ + V HP + L + G G + +
Sbjct: 97 DGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV-GDQSGAIHI 155
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T ++ + L P + E ++N VW +V
Sbjct: 156 WDLKT-----DHNEQLIP--EPEVSVNSVHIDPDASYMAAVNSSGNCYVWNLTGGIGEEV 208
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGV 370
++ +P +K Y C + P D +A + + T F L +S+
Sbjct: 209 TQLIPKTKIPAHNRYALQC-KFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNP 266
Query: 371 S----GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 267 GETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFN 322
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 163 (62.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + + L H+ + +KWS G
Sbjct: 411 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQEVCIHDLQAHNKEIYTIKWSPTGP 467
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
+ + S +D + RL D+E+G+ T + + + V V F P+ L SG
Sbjct: 468 ATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYL-ASGSFD 526
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y + G I +V + G
Sbjct: 527 KCVHIWNTQSGNLVHSY-RGTGGIFEVCWNARG 558
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 37/155 (23%), Positives = 69/155 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D+ + + H+ VN +KW G+
Sbjct: 370 HSAPALDVDWQNNTT--FASCSTDMCIHVCRLGC-DRPV-KTFQGHTNEVNAIKWDPSGM 425
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + + Q+ +E + +K+ P NSN+ L+ S
Sbjct: 426 LLASCSDDMTLKIWSMKQEVCIHDLQAHNKE--IYTIKWSPTGPATSNPNSNIMLASASF 483
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWDI G H + P+ V F+ +GK
Sbjct: 484 DSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGK 518
Score = 113 (44.8 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ T+ LLA+ D +W+ D LA L H + +KW+++G ++
Sbjct: 289 KDVTSLDWN-TNGTLLATGSYDGFA---RIWTEDGNLASTLGQHKGPIFALKWNRKGNYI 344
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 345 LSAGVDKTTIIWDAHTGEAKQQF 367
Score = 68 (29.0 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 307 VWDVSREVPLSK-QVY-VEAYTCPCVRHHPFDPYFVAQSNGNYI---AIFSSTPPFRLDK 361
+W + +EV + Q + E YT ++ P P + N N + A F ST RL
Sbjct: 438 IWSMKQEVCIHDLQAHNKEIYT---IKWSPTGPA-TSNPNSNIMLASASFDST--VRLWD 491
Query: 362 FKRYE-SHGVSGF--PI-KCSFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+R +H ++ P+ +FS DG+ L SGS D ++ +N +S L
Sbjct: 492 IERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNL 539
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 162 (62.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 47/154 (30%), Positives = 73/154 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + L HS + +KWS G
Sbjct: 361 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQDACVHDLQAHSKEIYTIKWSPTGP 417
Query: 203 --------LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGS 252
+ + S +D + RL DVE+G I T + +E V V F P+ L SG
Sbjct: 418 ATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQE-PVYSVAFSPDGKYL-ASGSF 475
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y + G I +V + G
Sbjct: 476 DKCVHIWNTQSGSLVHSY-RGTGGIFEVCWNARG 508
Score = 117 (46.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D+ + + H+ VN +KW G+
Sbjct: 320 HSAPALDVDWQNNTT--FASCSTDMCIHVCRLGC-DRPV-KTFQGHTNEVNAIKWDPSGM 375
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P NSN+ L+ S
Sbjct: 376 LLASCSDDMTLKIWSMKQDACVHDLQAHSKE--IYTIKWSPTGPATSNPNSNIMLASASF 433
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +GK
Sbjct: 434 DSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGK 468
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W+ D LA L H + +KW+++G ++
Sbjct: 239 KDVTSLDWN-SDGTLLATGSYDGFA---RIWTEDGNLASTLGQHKGPIFALKWNKKGNYI 294
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 295 LSAGVDKTTIIWDAHTGEAKQQF 317
Score = 59 (25.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+FS DG+ L SGS D ++ +N +S L
Sbjct: 462 AFSPDGKYLASGSFDKCVHIWNTQSGSL 489
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 162 (62.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 47/154 (30%), Positives = 73/154 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + L HS + +KWS G
Sbjct: 361 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQDACVHDLQAHSKEIYTIKWSPTGP 417
Query: 203 --------LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGS 252
+ + S +D + RL DVE+G I T + +E V V F P+ L SG
Sbjct: 418 ATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQE-PVYSVAFSPDGKYL-ASGSF 475
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y + G I +V + G
Sbjct: 476 DKCVHIWNTQSGSLVHSY-RGTGGIFEVCWNARG 508
Score = 117 (46.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D+ + + H+ VN +KW G+
Sbjct: 320 HSAPALDVDWQNNTT--FASCSTDMCIHVCRLGC-DRPV-KTFQGHTNEVNAIKWDPSGM 375
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P NSN+ L+ S
Sbjct: 376 LLASCSDDMTLKIWSMKQDACVHDLQAHSKE--IYTIKWSPTGPATSNPNSNIMLASASF 433
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +GK
Sbjct: 434 DSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGK 468
Score = 107 (42.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W+ D LA L H + +KW+++G ++
Sbjct: 239 KDVTSLDWN-SDGTLLATGSYDGFA---RIWTEDGNLASTLGQHKGPIFALKWNKKGNYI 294
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 295 LSAGVDKTTIIWDAHTGEAKQQF 317
Score = 59 (25.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+FS DG+ L SGS D ++ +N +S L
Sbjct: 462 AFSPDGKYLASGSFDKCVHIWNTQSGSL 489
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + + L H+ + +KWS G
Sbjct: 403 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQEVCIHDLQAHNKEIYTIKWSPTGP 459
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
+ + S +D + RL D+E+G+ T + + + V V F P+ L SG
Sbjct: 460 ATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYL-ASGSFD 518
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y + G I +V + G
Sbjct: 519 KCVHIWNTQSGNLVHSY-RGTGGIFEVCWNARG 550
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 36/155 (23%), Positives = 69/155 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D+ + + H+ VN +KW G+
Sbjct: 362 HSAPALDVDWQNNMT--FASCSTDMCIHVCRLGC-DRPV-KTFQGHTNEVNAIKWDPSGM 417
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + + Q+ +E + +K+ P NSN+ L+ S
Sbjct: 418 LLASCSDDMTLKIWSMKQEVCIHDLQAHNKE--IYTIKWSPTGPATSNPNSNIMLASASF 475
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWDI G H + P+ V F+ +G+
Sbjct: 476 DSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGR 510
Score = 113 (44.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ T+ LLA+ D +W+ D LA L H + +KW+++G ++
Sbjct: 281 KDVTSLDWN-TNGTLLATGSYDGFA---RIWTEDGNLASTLGQHKGPIFALKWNRKGNYI 336
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 337 LSAGVDKTTIIWDAHTGEAKQQF 359
Score = 67 (28.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 307 VWDVSREVPLSK-QVY-VEAYTCPCVRHHPFDPYFVAQSNGNYI---AIFSSTPPFRLDK 361
+W + +EV + Q + E YT ++ P P + N N + A F ST RL
Sbjct: 430 IWSMKQEVCIHDLQAHNKEIYT---IKWSPTGPA-TSNPNSNIMLASASFDST--VRLWD 483
Query: 362 FKRYE-SHGVSGF--PI-KCSFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+R +H ++ P+ +FS DG L SGS D ++ +N +S L
Sbjct: 484 IERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNL 531
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 67/300 (22%), Positives = 125/300 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H +V S++ +P H++L AS G D IW++ + +Q + + L H ++ + WS G
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQ-ICQ-LTGHKDSIVAIDWSFDGT 117
Query: 204 FVLSCGYDCSSRLVDVEKGIE-TQSFREELAVRVVKFHPENSNLFLSGG-SKGLLRLWDI 261
++ + G D RL G E +F + + +HP+ LFL+ G + G + +W +
Sbjct: 118 YIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKG--LFLAAGCNDGSIWMWSL 175
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
+GKV P+ +F G ++VW+ + P +
Sbjct: 176 PSGKVVQVMYGHTAPVNAGKFIPPG-----VGKRLATVDDSGTLIVWNPATGAPECRMSS 230
Query: 322 VEAYTCPCVRHHPFD-PYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFS 380
+ P F + GN + + S+ ++ SH ++ + S
Sbjct: 231 DDHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNIN--SSHILASLEAQTE-S 287
Query: 381 LDGEKLVSG-------SSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
++ L + S DG++ Y+ S + RK +EQA ID F P P ++ +C+
Sbjct: 288 VEAIALCTALPICACASVDGTVALYDSASLKF-RKSLPHEQAVIDCKFLPNTPYLLTACA 346
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + L HS + +KWS G
Sbjct: 362 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQDTCVHDLQAHSKEIYTIKWSPTGP 418
Query: 203 --------LFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSK 253
+ + S +D + RL DVE+G+ + + + V V F P+ L SG
Sbjct: 419 ATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYL-ASGSFD 477
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y + G I +V + G
Sbjct: 478 KCVHIWNTQSGSLVHSY-RGTGGIFEVCWNARG 509
Score = 112 (44.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 35/155 (22%), Positives = 68/155 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D+ + + H+ VN +KW G+
Sbjct: 321 HSAPALDVDWQNNTT--FASCSTDMCIHVCRLGC-DRPV-KTFQGHTNEVNAIKWDPSGM 376
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P NS++ L+ S
Sbjct: 377 LLASCSDDMTLKIWSMKQDTCVHDLQAHSKE--IYTIKWSPTGPATSNPNSSIMLASASF 434
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +GK
Sbjct: 435 DSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGK 469
Score = 107 (42.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W+ D LA L H + +KW+++G ++
Sbjct: 240 KDVTSLDWN-SDGTLLATGSYDGFA---RIWTEDGNLASTLGQHKGPIFALKWNKKGNYI 295
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 296 LSAGVDKTTIIWDAHTGEAKQQF 318
Score = 59 (25.8 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+FS DG+ L SGS D ++ +N +S L
Sbjct: 463 AFSPDGKYLASGSFDKCVHIWNTQSGSL 490
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/253 (23%), Positives = 105/253 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV + +SP+ AHLLAS+ D+++ +W + + + + H+ +V V +S G
Sbjct: 59 HKDAVTCVQFSPS-AHLLASSSRDKTVRLWVPSVKGESV--LFRAHTGSVRSVCFSADGQ 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+L+ D S +L V + + RE VR +F P+ L +S ++LWD
Sbjct: 116 SLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQ-LMVSVSDDRTVKLWDAS 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ ++ H + + G V+F + VWD+ R L + V
Sbjct: 175 SRQLIHTFCEPGGYSSYVDF-------HPSSTCIATASSDNTVRVWDI-RTHTLLQHYQV 226
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
+ + HP + + S+ + + I L+ Y HG G SFS
Sbjct: 227 HSAAVNALSFHPSGNHLLTASSDSTLKILDL-----LEGRLLYTLHGHQGSASCVSFSRS 281
Query: 383 GEKLVSGSSDGSI 395
G++ S SD +
Sbjct: 282 GDQFASAGSDQQV 294
Score = 127 (49.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 60/280 (21%), Positives = 112/280 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H A+ S+++SP+ + AS +D S+ +WN+ + Q A H AV V++S
Sbjct: 17 HRDAITSLDFSPSGKQI-ASGSVDASVMVWNM--KPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query: 204 FVLSCGYDCSSRL-VDVEKGIETQSFREEL-AVRVVKFHPENSNLFLSGGSKGLLRLWDI 261
+ S D + RL V KG E+ FR +VR V F + +L + + + +LW +
Sbjct: 74 LLASSSRDKTVRLWVPSVKG-ESVLFRAHTGSVRSVCFSADGQSLLTASDDQSI-KLWSV 131
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
K+ + + F+ +G+ + +WD S +
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRT-------VKLWDASSRQLIHTFCE 184
Query: 322 VEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSL 381
Y+ V HP S+ N + ++ L + Y+ H + + SF
Sbjct: 185 PGGYSS-YVDFHPSSTCIATASSDNTVRVWDIRTHTLL---QHYQVHSAAVNAL--SFHP 238
Query: 382 DGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF 421
G L++ SSD ++ + L + ++ + V+F
Sbjct: 239 SGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSF 278
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 144 HTKAVNSINWSP--------THAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
HT V+ ++W P + LA+ D ++C+W S+ L R L H A V
Sbjct: 213 HTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKA-SQSTPLLR-LEGHLARVGR 270
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIET--QSFREELAVRVVKFHPENSNLFLSGGSK 253
V + G +++S +D + RL DV G+E Q E + + P+ S L SGG+
Sbjct: 271 VAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSE-GIFSIACQPDGS-LVSSGGND 328
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE 313
+ R+WD+R+GK + + I+ + ++ NG Q + +WD+ R+
Sbjct: 329 AIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDT-------VKIWDL-RK 380
Query: 314 VPLSKQVYVEAYTCPCVRH 332
V L+ + + VR+
Sbjct: 381 VSLAHTIPAHSSLVSDVRY 399
>DICTYBASE|DDB_G0276031 [details] [associations]
symbol:DDB_G0276031 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276031
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000014 EMBL:X16524 PIR:S05357 RefSeq:XP_643326.1
ProteinModelPortal:P14197 STRING:P14197 EnsemblProtists:DDB0185151
GeneID:8620373 GenomeReviews:CM000151_GR KEGG:ddi:DDB_G0276031
KO:K12880 OMA:YAPEINE ProtClustDB:CLSZ2430924 Uniprot:P14197
Length = 478
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/219 (26%), Positives = 99/219 (45%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H ++ I+WSP + LLASAG D+ I IW+V + K ++ +S + DV+WS G
Sbjct: 227 HDGSIEKISWSPKNNDLLASAGTDKVIKIWDV--KIGKCIGTVSTNSENI-DVRWSPDGQ 283
Query: 204 FVLSCGYDCSSRLVDVE--KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDI 261
F+++C D L+D+ K ++ F E + V + N +L L S G + +
Sbjct: 284 FIVACTRDDHLALIDLPTIKTLKIYKFNGE-ELNQVGWD-NNGDLILMANSMGNIEAYKF 341
Query: 262 RTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVY 321
H ++ L + +I +F + +WD+ E + + +
Sbjct: 342 LPKSTTH--VKHLKTLYGHTASIYCMEFDPTGKYLAAGSADSIVSLWDI--EDMMCVKTF 397
Query: 322 VEAYTCPCVR-HHPFDPYFVAQSN-GNYIAIF---SSTP 355
+++ T PC FD F+A S+ + I IF SS P
Sbjct: 398 IKS-TFPCRSVSFSFDGQFIAASSFESTIEIFHIESSQP 435
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 128 (50.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 40/164 (24%), Positives = 79/164 (48%)
Query: 108 SDAYLRQDILSLLRHLPKSHV-------RRSKIPGRLSTALCHHTKAVNSINWSPTHAHL 160
SDA R+ + S +P+ +V + ++P + H VN++ +SP + L
Sbjct: 296 SDAARRRSVSSF--PVPQDNVDPHPGAGKEVRVPTTAMSVFDAHDGEVNAVQFSPG-SRL 352
Query: 161 LASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVE 220
LA+ GMD+ + +W V+ + L+ +A + +++ G ++L+ D +SR+ V+
Sbjct: 353 LATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD 412
Query: 221 KGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
+ V KF +N+ + +SG L+LWD+R+
Sbjct: 413 DYRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS 455
Score = 79 (32.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 15/52 (28%), Positives = 33/52 (63%)
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHPILPNII 429
FS DG + +G+++GS+Y +N S ++E+ + + + I+ VA+ P +++
Sbjct: 558 FSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSPAGSHVV 609
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 386 LVSGSSDGSIYFYNCRSSELERKIK 410
++SG D I F++ RS + R+++
Sbjct: 478 VMSGHFDKKIRFWDIRSESIVREME 502
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 149 (57.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 144 HTKAVNSINWSP----THAHLLASA------GMDQSICIWNVWSRDQKLARVLNFHSAAV 193
HT V ++W P +++ SA G + ++C+W++ +DQ LA L HS V
Sbjct: 238 HTDRVGGLSWFPGATLPESNVSESAVNFVSGGGEGNVCLWSL-DKDQPLA-TLEGHSGRV 295
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGS 252
++ G ++ S YD + RL DVE E Q V V F+ + S L SGG
Sbjct: 296 CRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGS-LLASGGL 354
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ R+WD+RTG+ + I +++ ++G
Sbjct: 355 DSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDG 388
Score = 54 (24.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
+ +DG +++SGS DG + ++ R + I A++ DV ++
Sbjct: 384 WGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRWY 427
>UNIPROTKB|Q5I0B4 [details] [associations]
symbol:mlst8 "Target of rapamycin complex subunit lst8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005737
"cytoplasm" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 KO:K08266
CTD:64223 HOGENOM:HOG000208395 HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3
EMBL:CR760803 EMBL:BC088512 RefSeq:NP_001011443.1 UniGene:Str.15148
ProteinModelPortal:Q5I0B4 STRING:Q5I0B4 GeneID:496930
KEGG:xtr:496930 Xenbase:XB-GENE-981763 InParanoid:Q5I0B4
Bgee:Q5I0B4 Uniprot:Q5I0B4
Length = 326
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 65/296 (21%), Positives = 129/296 (43%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VNS+ +P + ++A+AG Q I ++++ S + V+N+ + N V + +
Sbjct: 40 HQDSQVNSLEVTPDRS-MIAAAGY-QHIRMYDLNSNNPN--PVINYDGVSKNITSVGFHE 95
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC +R+ D+ + ++ Q F+ + V HP + L + G G + +
Sbjct: 96 DGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVFLHPNQAELIV-GDQSGAIHI 154
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T + + L P DV +IN VW D+
Sbjct: 155 WDLKT-----DQNEQLIPETDV--SINSVHIDPDASYMAAVNSSGNCFVWNLTGGLGEDL 207
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGV 370
++ +P +K + C + P D +A + + T F L +S+
Sbjct: 208 TQLIPKTKIPAHKRCALKC-KFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNP 265
Query: 371 S----GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 266 GETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFN 321
>UNIPROTKB|Q6PA72 [details] [associations]
symbol:mlst8 "Target of rapamycin complex subunit lst8"
species:8355 "Xenopus laevis" [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K08266 CTD:64223 HOVERGEN:HBG054763
EMBL:BC060429 RefSeq:NP_001083382.1 UniGene:Xl.19213
ProteinModelPortal:Q6PA72 IntAct:Q6PA72 GeneID:398895
KEGG:xla:398895 Xenbase:XB-GENE-981769 Uniprot:Q6PA72
Length = 326
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 65/296 (21%), Positives = 129/296 (43%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VNS+ +P + ++A+AG Q I ++++ S + V+N+ + N V + +
Sbjct: 40 HQDSQVNSLEVTPDRS-MIAAAGY-QHIRMYDLNSNNPN--PVINYDGVSKNITSVGFHE 95
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC +R+ D+ + ++ Q F+ + V HP + L + G G + +
Sbjct: 96 DGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVFLHPNQAELIV-GDQSGAIHI 154
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T + + L P DV +IN VW D+
Sbjct: 155 WDLKT-----DQNEQLIPETDV--SINSVHIDPDASYMAAVNSSGNCFVWNLTGGLGEDL 207
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGV 370
++ +P +K + C + P D +A + + T F L +S+
Sbjct: 208 TQLIPKTKIPAHKRCALKC-KFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNP 265
Query: 371 S----GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 266 GETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFN 321
>MGI|MGI:1929514 [details] [associations]
symbol:Mlst8 "MTOR associated protein, LST8 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0030838
"positive regulation of actin filament polymerization"
evidence=IMP] [GO:0031931 "TORC1 complex" evidence=ISO] [GO:0031932
"TORC2 complex" evidence=ISO] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=ISO] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IMP] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=ISO] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1929514 GO:GO:0005829 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 GO:GO:0031931 GO:GO:0031932 KO:K08266 GO:GO:0032008
CTD:64223 GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 OMA:NNKGNCY EMBL:AF237676
EMBL:AK002751 EMBL:AK038515 EMBL:AK040100 EMBL:AK048102
EMBL:AK077680 EMBL:AK083731 EMBL:BC015279 IPI:IPI00458055
RefSeq:NP_001239392.1 RefSeq:NP_001239393.1 RefSeq:NP_001239394.1
RefSeq:NP_064372.2 UniGene:Mm.289516 ProteinModelPortal:Q9DCJ1
SMR:Q9DCJ1 IntAct:Q9DCJ1 STRING:Q9DCJ1 PhosphoSite:Q9DCJ1
PaxDb:Q9DCJ1 PRIDE:Q9DCJ1 Ensembl:ENSMUST00000070888
Ensembl:ENSMUST00000179163 GeneID:56716 KEGG:mmu:56716
UCSC:uc008awg.2 InParanoid:Q9DCJ1 NextBio:313187 Bgee:Q9DCJ1
Genevestigator:Q9DCJ1 Uniprot:Q9DCJ1
Length = 326
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 64/296 (21%), Positives = 132/296 (44%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VN++ +P + ++A+AG Q I ++++ S + ++++ + N V + +
Sbjct: 40 HQDSQVNALEITPDRS-MIAAAGY-QHIRMYDLNSNNPN--PIISYDGVSKNIASVGFHE 95
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC++R+ D+ + ++ Q F+ + V HP + L + G G + +
Sbjct: 96 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV-GDQSGAIHI 154
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T ++ + L P + E +I VW DV
Sbjct: 155 WDLKT-----DHNEQLIP--EPESSITSAHIDPDASYMAAVNSAGNCYVWNLTGGIGDDV 207
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRL--DKFKRYESH 368
++ +P +K Y C R P D +A + + T F L + + +
Sbjct: 208 TQLIPKTKIPAHTRYALQC-RFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSSNP 265
Query: 369 GVS--GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G S G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 266 GESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAVVCLAFN 321
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 136 (52.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 45/172 (26%), Positives = 86/172 (50%)
Query: 100 AAQVLGSISDAYLRQDILSLLRHLPK----SHVRRSKIPGRLSTALC---HHTKAVNSIN 152
A +L SI++ + R+ + S +P+ +H SK +TA+C H VN++
Sbjct: 272 AGGLLDSITNIFGRRSVSSF--PVPQDNVDTHPGSSKEVRVPTTAMCIFDAHDGEVNAVQ 329
Query: 153 WSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDC 212
+SP + LLA+ GMD+ + +W V+ + L+ +A + +++ G ++L+ D
Sbjct: 330 FSPG-SRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDF 388
Query: 213 SSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
+SR+ V+ + V KF +N+ + +SG L+LWD+R+
Sbjct: 389 ASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS 439
Score = 69 (29.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHP 423
FS DG + +GS++GS+Y ++ S ++E+ + + I+ VA+ P
Sbjct: 542 FSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSP 587
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 386 LVSGSSDGSIYFYNCRSSELERKIK 410
++SG D I F++ RS + R+++
Sbjct: 462 VMSGHFDKKIRFWDIRSESIVREME 486
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 145 (56.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L HT V S+ + T L+ + SI +W++ + K+ R L H A + + +
Sbjct: 62 SLTGHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA--KILRTLMGHKANICSLDFH 118
Query: 200 QQGLFVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G FV S D + +L D+ KG + AVR ++F P+ L S ++L
Sbjct: 119 PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKL 177
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTIN 285
WD+ GK+ E+ GP+ VEF N
Sbjct: 178 WDLTAGKMMSEFPGHTGPVNVVEFHPN 204
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 155 (59.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 44/140 (31%), Positives = 69/140 (49%)
Query: 153 WSPTHAHLLASAGMDQSICIWNVWSRDQ--KLARVLNFHSAAVNDVKWSQQGLFVLSCGY 210
+SPT A+ +A G+D I+N+ SR+Q ++ R LN H+ ++ ++ V S G
Sbjct: 112 YSPT-ANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTSSG- 169
Query: 211 DCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHE 269
D + L DVE G + F + V V P+ N F+SG +LWD+R+GK
Sbjct: 170 DMTCILWDVENGTKITEFSDHNGDVMSVSVSPDK-NYFISGACDATAKLWDLRSGKCVQT 228
Query: 270 YIQSLGPILDVEFTINGKQF 289
+ I V++ NG F
Sbjct: 229 FTGHEADINAVQYFPNGLSF 248
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 158 (60.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/154 (29%), Positives = 73/154 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W P+ LLAS D ++ IW++ + L HS + +KWS G
Sbjct: 357 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM--KQDTCVHDLQAHSKEIYTIKWSPTGP 413
Query: 203 --------LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGS 252
+ + S +D + RL DV++G I T + +E V V F P+ L SG
Sbjct: 414 GTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQE-PVYSVAFSPDGKYL-ASGSF 471
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+ +W+ ++G + H Y + G I +V + G
Sbjct: 472 DKCVHIWNTQSGTLVHSY-RGTGGIFEVCWNARG 504
Score = 115 (45.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ ++W AS D I + + D+ + + H+ VN +KW G+
Sbjct: 316 HSAPALDVDWQNNTT--FASCSTDMCIHVCRLGC-DRPV-KTFQGHTNEVNAIKWDPSGM 371
Query: 204 FVLSCGYDCSSRLVDVEKGI---ETQSFREELAVRVVKFHPE-------NSNLFLSGGS- 252
+ SC D + ++ +++ + Q+ +E + +K+ P NSN+ L+ S
Sbjct: 372 LLASCSDDMTLKIWSMKQDTCVHDLQAHSKE--IYTIKWSPTGPGTSNPNSNIMLASASF 429
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G H + P+ V F+ +GK
Sbjct: 430 DSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGK 464
Score = 109 (43.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/166 (25%), Positives = 69/166 (41%)
Query: 132 KIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVW--SRDQKLARVLNF- 188
+IP +T L H V W+P + LLAS D + IWN+ S VL
Sbjct: 165 EIPPNKATVLRGHESEVFICAWNPV-SDLLASGSGDSTARIWNLNENSNSGSTQLVLRHC 223
Query: 189 -----HSAAVN-DVK---WSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKF 239
H N DV W+ G + + YD +R+ + + + + + + +K+
Sbjct: 224 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKW 283
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTIN 285
+ + N LS G +WD TG+ ++ P LDV++ N
Sbjct: 284 N-KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 328
Score = 58 (25.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSEL 405
+FS DG+ L SGS D ++ +N +S L
Sbjct: 458 AFSPDGKYLASGSFDKCVHIWNTQSGTL 485
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 145 (56.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L HT V S+ + T L+ + SI +W++ + K+ R L H A + + +
Sbjct: 58 SLTGHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA--KILRTLMGHKANICSLDFH 114
Query: 200 QQGLFVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G FV S D + +L D+ KG + AVR ++F P+ L S ++L
Sbjct: 115 PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKL 173
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTIN 285
WD+ GK+ E+ GP+ VEF N
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN 200
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 146 (56.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ V ++SP +LL S D ++ +W++ Q ++ + H+ V D ++S
Sbjct: 522 HSGPVYGTSFSPDRNYLL-SCSEDGTVRLWSL----QTFTCLVGYKGHNYPVWDTQFSPY 576
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
G + +S G+D +RL + + F LA V +FHP NSN +G + +RLWD
Sbjct: 577 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP-NSNYIATGSADRTVRLWD 635
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GPI + F+ NG+
Sbjct: 636 VLNGNCVRIFTGHKGPIHSLAFSPNGR 662
Score = 60 (26.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 82 PGIPAATDPKPDPSAVVAAAQVLGSISDA 110
P P AT P PSA A + GS DA
Sbjct: 27 PAAPPATAAPPAPSAAAAEGETAGSAGDA 55
Score = 48 (22.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 51 LHRPNQQHSG--LRTEASVAGRYMSKRERALLGPGIPAATDPKPDPSA 96
L R N + S LR EA + G + + G G+P A+ + D S+
Sbjct: 84 LRRSNLRESEEILRREARLLGEDLGAAALSPAGAGLPGASGGEGDASS 131
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 159 (61.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 50/180 (27%), Positives = 81/180 (45%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNV--WSRDQKLARVLNFHSAA 192
G ++ +L HT V ++P +LL S D +I +W++ WS H
Sbjct: 440 GEVTRSLMGHTGPVYRCAFAP-EMNLLLSCSEDSTIRLWSLLTWS----CVVTYRGHVYP 494
Query: 193 VNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGG 251
V DV+++ G + +SC YD ++RL + + F L+ V V+FHP NSN +G
Sbjct: 495 VWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHP-NSNYVATGS 553
Query: 252 SKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVS 311
S +RLWD TG+ G + + F+ G+ I++WD+S
Sbjct: 554 SDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHN-------IIIWDLS 606
>TAIR|locus:2139335 [details] [associations]
symbol:AT4G03020 "AT4G03020" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GO:GO:0080008 KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135
OMA:RMLHQRE EMBL:AY099735 EMBL:BT000357 IPI:IPI00532225
RefSeq:NP_001190666.1 RefSeq:NP_192211.2 UniGene:At.34236
ProteinModelPortal:Q8LPI5 SMR:Q8LPI5 IntAct:Q8LPI5 STRING:Q8LPI5
PaxDb:Q8LPI5 PRIDE:Q8LPI5 EnsemblPlants:AT4G03020.1
EnsemblPlants:AT4G03020.2 GeneID:828111 KEGG:ath:AT4G03020
TAIR:At4g03020 InParanoid:Q8LPI5 PhylomeDB:Q8LPI5
ProtClustDB:CLSN2690277 Genevestigator:Q8LPI5 Uniprot:Q8LPI5
Length = 493
Score = 118 (46.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACIDVA 420
Y+ H V I+C FS G+K + +GS+D S+Y Y+ S + +K + D
Sbjct: 391 YKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCN 450
Query: 421 FHPILPNIIGSCSWNGDVSVYE 442
+HP P +I S SW+GD+ +E
Sbjct: 451 WHPYYPTLISS-SWDGDLVKWE 471
Score = 83 (34.3 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 189 HSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVKFHPENSNLF 247
+S + VK+S G V++ D S + D+E + ++ V V F E+ NL
Sbjct: 228 YSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLI 287
Query: 248 LSGGSKGLLRLWDIR 262
LSG L ++WD R
Sbjct: 288 LSGSDDNLCKVWDRR 302
Score = 83 (34.3 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSIC-IWN---VWSRDQKLARVLNFHSA 191
R+S HT VN++ ++ +L+ S G D ++C +W+ RD K A VL H
Sbjct: 262 RVSLRTVAHTSDVNTVCFADESGNLILS-GSDDNLCKVWDRRCFIGRD-KPAGVLVGHLE 319
Query: 192 AVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL 232
V + G + +S G D + +L D+ K + R E+
Sbjct: 320 GVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEV 360
Score = 55 (24.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 29/118 (24%), Positives = 52/118 (44%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQ-GLFVLSC 208
S+ +S ++A + D SI ++++ + L V H++ VN V ++ + G +LS
Sbjct: 234 SVKFSTDGREVVAGSS-DDSIYVYDLEANRVSLRTVA--HTSDVNTVCFADESGNLILSG 290
Query: 209 GYDCSSRLVDVEKGIETQSFREELAVRV--VKFHPENSN--LFLSGGSKGLLRLWDIR 262
D ++ D I L + V F + F+S G ++LWDIR
Sbjct: 291 SDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIR 348
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 129 (50.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 44/170 (25%), Positives = 82/170 (48%)
Query: 100 AAQVLGSISDAYLRQDILSLLRHLPK--SHVRRSKIPGRLSTALC---HHTKAVNSINWS 154
A +L SI++ + R+ S+ +H SK TA+C H VN++ +S
Sbjct: 272 AGGLLDSITNIFGRRSFSSVPAPQDNVDTHPGSSKEVRVPVTAVCVFDAHDGEVNAVQFS 331
Query: 155 PTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSS 214
P + LLA+ GMD+ + +W V+ + L+ +A + +++ G ++L+ D +S
Sbjct: 332 PG-SRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFAS 390
Query: 215 RLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
R+ V+ + V KF +N+ + +SG L+LWD+R+
Sbjct: 391 RIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS 439
Score = 73 (30.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHP 423
FS DG + +GS++GS+Y ++ S ++E+ + + + I+ VA+ P
Sbjct: 544 FSPDGSYVAAGSAEGSLYVWSVLSGKVEKVLSKHHSSPINAVAWSP 589
>RGD|69242 [details] [associations]
symbol:Mlst8 "MTOR associated protein, LST8 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0030838 "positive regulation
of actin filament polymerization" evidence=IEA;ISO] [GO:0032008
"positive regulation of TOR signaling cascade" evidence=IEA;ISO]
[GO:0032314 "regulation of Rac GTPase activity" evidence=IEA;ISO]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=ISO] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AF051155 RGD:69242 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0050731 GO:GO:0030838 GO:GO:0032314 KO:K08266 GO:GO:0032008
CTD:64223 HOGENOM:HOG000208395 HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3
EMBL:BC097319 IPI:IPI00209970 RefSeq:NP_071799.2 UniGene:Rn.9444
ProteinModelPortal:Q9Z2K5 STRING:Q9Z2K5 PhosphoSite:Q9Z2K5
GeneID:64226 KEGG:rno:64226 UCSC:RGD:69242 InParanoid:Q9Z2K5
NextBio:612918 Genevestigator:Q9Z2K5 Uniprot:Q9Z2K5
Length = 326
Score = 151 (58.2 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 63/296 (21%), Positives = 131/296 (44%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VN++ +P + ++A+ G Q I ++++ S + ++++ + N V + +
Sbjct: 40 HQDSQVNALEITPDRS-MIAATGY-QHIRMYDLNSNNPN--PIISYDGVSKNIASVGFHE 95
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC++R+ D+ + ++ Q F+ + V HP + L + G G +
Sbjct: 96 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV-GDQSGTSHI 154
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T ++ + L P + EF+I VW +V
Sbjct: 155 WDLKT-----DHNEQLIP--EPEFSITSAHIDPDASYMAAVNSAGNCFVWNLTGGIGDEV 207
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRL--DKFKRYESH 368
++ +P +K Y C R P D +A + + T F L + + +
Sbjct: 208 TQLIPKTKIPAHTRYALQC-RFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSSNP 265
Query: 369 GVS--GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G S G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 266 GESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAVVCLAFN 321
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 133 (51.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 41/159 (25%), Positives = 77/159 (48%)
Query: 106 SISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAG 165
S+S + QDI+ H P S + ++P S H VN++ +SP + LLA+ G
Sbjct: 287 SVSSIPVPQDIMDT--H-PASG-KDVRVPTTASYVFDAHDGEVNAVQFSPG-SRLLATGG 341
Query: 166 MDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIET 225
MD+ + +W + + L+ +A + +++ G ++L+ D +SR+ V+
Sbjct: 342 MDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLR 401
Query: 226 QSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
+ V KF +N+ + +SG L+LWD+R+
Sbjct: 402 HTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS 439
Score = 68 (29.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHP 423
FS DG + +GS++GS+Y ++ + ++E+ + + I+ VA+ P
Sbjct: 542 FSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAP 587
Score = 39 (18.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 386 LVSGSSDGSIYFYNCRSSELERKIK 410
++SG D I F++ RS + R+++
Sbjct: 462 VMSGHFDKKIRFWDIRSESVVREME 486
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 155 (59.6 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 41/144 (28%), Positives = 65/144 (45%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWS--RDQKLARVLNFHSAAVNDVKW 198
L H K+V + WSPT LLAS D SI +W+ S +D + V H + VN + W
Sbjct: 271 LTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISW 330
Query: 199 SQQGLFVLSCGYDCSSR---LVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKG 254
++ ++S G D + L ++ G F+ + V +HP + F++ G
Sbjct: 331 NRHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDD 390
Query: 255 LLRLWDIRTGKVAHEYIQSLGPIL 278
+WDI T I+ + P L
Sbjct: 391 QTTIWDIATEADGQTNIEGVPPQL 414
Score = 40 (19.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 11 TSDDEPEPASKHEPELRSIFSP 32
+ D++ E K EP++ ++ P
Sbjct: 142 SEDEDAEEEKKREPKMHAVSIP 163
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 152 (58.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 38/134 (28%), Positives = 73/134 (54%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G+L T L HTK ++ I +SP ++++LAS D +I +WN+ Q+ ++L H+ +
Sbjct: 58 GKLITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNI--TQQRCIKLLRKHTYHIT 115
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKG---IETQSFREELAVRVVKFHPENSNLFLSGG 251
+K++Q+G ++S D + + D+ I T V + P++S + +S
Sbjct: 116 TLKFTQKGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDS-IIVSAS 174
Query: 252 SKGLLRLWDIRTGK 265
GL+RL+D++T +
Sbjct: 175 YDGLMRLFDLQTSQ 188
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 152 (58.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 59/257 (22%), Positives = 106/257 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ + + + P A + A++ D ++ +WN+ + AR + F HSA VN V WS +
Sbjct: 17 HSGGITQLRFGPDGAQI-ATSSTDSTVILWNL----NQAARCIRFASHSAPVNGVAWSPK 71
Query: 202 GLFVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWD 260
G V S G+D + ++ + + +G+ + AVR V F +L L+ ++W
Sbjct: 72 GNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFD-STGHLMLTASDDKSAKIWR 130
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQV 320
+ + + Q + +F+ NGK + ++DV + +
Sbjct: 131 VARRQFVSSFAQQNNWVRSAKFSPNGK-------LVATASDDKSVRIYDVDSGECV--RT 181
Query: 321 YVEAYTCPC-VRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIK-CS 378
+ E P + HP+ N I IF + L + Y H P+ +
Sbjct: 182 FTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLL---QLYVVHSA---PVNDVA 235
Query: 379 FSLDGEKLVSGSSDGSI 395
F G L+SGS D +I
Sbjct: 236 FHPSGHFLLSGSDDRTI 252
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/156 (29%), Positives = 81/156 (51%)
Query: 132 KIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSA 191
K+ G +S H+KAV S+++ T HL+ +A D+S IW V +R Q ++ ++
Sbjct: 90 KLRG-VSGEFVAHSKAVRSVDFDST-GHLMLTASDDKSAKIWRV-ARRQFVSSFAQQNNW 146
Query: 192 AVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAV-RVVKFHPENSNLFLSG 250
V K+S G V + D S R+ DV+ G ++F EE A R + +HP + L ++
Sbjct: 147 -VRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVAL 205
Query: 251 GSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
G + +++D+ ++ Y+ P+ DV F +G
Sbjct: 206 GCNRI-KIFDVSGSQLLQLYVVHSAPVNDVAFHPSG 240
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 69/281 (24%), Positives = 115/281 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ VN + WSP +L+ASAG D+++ IW R V HS AV V + G
Sbjct: 59 HSAPVNGVAWSPK-GNLVASAGHDRTVKIWEPKLRGVSGEFVA--HSKAVRSVDFDSTGH 115
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+L+ D S+++ V + SF ++ VR KF P N L + +R++D+
Sbjct: 116 LMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSP-NGKLVATASDDKSVRIYDVD 174
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+G+ + + + + G I ++DVS L Q+YV
Sbjct: 175 SGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNR-------IKIFDVSGSQLL--QLYV 225
Query: 323 EAYTCPC--VRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFS 380
++ P V HP + ++ S+ I I L+ Y G + +FS
Sbjct: 226 -VHSAPVNDVAFHPSGHFLLSGSDDRTIRILDL-----LEGRPIYTLTGHTDAVNAVAFS 279
Query: 381 LDGEKLVSGSSDGSIYFYNCR-----SSELERKIKAYEQAC 416
DG+K +G SD + + +S+ E K +C
Sbjct: 280 RDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSALASSSC 320
>UNIPROTKB|F8VV53 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR015505 PANTHER:PTHR10856
HGNC:HGNC:2254 ChiTaRS:CORO1C EMBL:AC007569 IPI:IPI01021948
ProteinModelPortal:F8VV53 SMR:F8VV53 Ensembl:ENST00000552871
ArrayExpress:F8VV53 Bgee:F8VV53 Uniprot:F8VV53
Length = 125
Score = 131 (51.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 24 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 82
Query: 204 FVLSCGYDCSSRLVDVEK 221
+ + D R++D K
Sbjct: 83 LICTASKDKKVRVIDPRK 100
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 138 (53.6 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 46/148 (31%), Positives = 71/148 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H K+ S++ P +L AS D S+ +W++ S D+ +A + H+ V V W
Sbjct: 278 AIVFHPKSTVSLD--PKDVNL-ASCAADGSVKLWSLDS-DEPVADIEG-HTVRVARVMWH 332
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ + YD S RL D+E E + V + FH + S L +GG R+
Sbjct: 333 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGRV 391
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTING 286
WD+RTG+ L I + F+ NG
Sbjct: 392 WDLRTGRCIMFLEGHLKEIYGINFSPNG 419
Score = 60 (26.2 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS +G + +GS D + ++ R I A++ V F PI N + + +++
Sbjct: 414 NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 473
Query: 438 VSVY 441
++
Sbjct: 474 AKIW 477
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 119 (46.9 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVL 206
AV ++ ++ + L S G D+ I +WN S L + H+ V D S +++
Sbjct: 19 AVRAVRYNVDGTYCL-SCGSDKKIKLWNPASG--LLLKTYGGHADEVTDAAGSCDSSYIV 75
Query: 207 SCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGK 265
S D S DV G + R VR V F+ E+S++ +SGG + WDIRT +
Sbjct: 76 SASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFN-EDSSIAISGGRDNAVMCWDIRTRR 134
Query: 266 V 266
+
Sbjct: 135 L 135
Score = 73 (30.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 365 YESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACI--DVAFH 422
Y H + I+C + ++V+GSSDG + Y+ ++ ++I+ + + +A H
Sbjct: 221 YRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSLATH 280
Query: 423 P 423
P
Sbjct: 281 P 281
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 119 (46.9 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L H ++ + + P A L+ SA D +I IW+ + + + R L H+ +V DV +
Sbjct: 103 SLTGHRASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYE--RSLKGHTDSVQDVAFD 159
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFR-EELAVRVVKFHPENSNLFLSGGSKGLLR 257
QG + SC D S +L D ++ E ++ + V V F P + LS ++
Sbjct: 160 AQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV-LSASRDRTIK 218
Query: 258 LWDIRTGKVAHEY 270
+W++ TG Y
Sbjct: 219 MWEVATGYCVKTY 231
Score = 77 (32.2 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+F G+ LVS S D +I ++ R+ + + A++ C + FH P +I S S +
Sbjct: 346 AFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVI-SGSVDQT 404
Query: 438 VSVYE 442
V V+E
Sbjct: 405 VKVWE 409
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 383 GEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
G L SGS D +I ++ + ++ +AFHP
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHP 349
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 153 (58.9 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/150 (30%), Positives = 71/150 (47%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HT VN+I W PT +LLAS D ++ IW++ + L H+ + +KWS G
Sbjct: 348 HTNEVNAIKWDPT-GNLLASCSDDMTLKIWSM--KQDSCVHDLQAHNKEIYTIKWSPTGP 404
Query: 203 --------LFVLS---CGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSG 250
L + S +D + RL DV++GI + + + V V F P+ L SG
Sbjct: 405 GTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYL-ASG 463
Query: 251 GSKGLLRLWDIRTGKVAHEYIQSLGPILDV 280
+ +W+ +TG + H Y + G I +V
Sbjct: 464 SFDKCVHIWNTQTGALVHSY-RGTGGIFEV 492
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W++D LA L H + +KW+++G F+
Sbjct: 226 KDVTSLDWN-SEGTLLATGSYDGFA---RIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQF 304
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS DG L SGS D ++ +N ++ L + +V ++ + +G+ + +G
Sbjct: 452 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAA-GDKVGASASDGS 509
Query: 438 VSVYE 442
V V +
Sbjct: 510 VCVLD 514
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 149 (57.5 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 44/165 (26%), Positives = 82/165 (49%)
Query: 103 VLGSISDAYLRQDILSLLRHLP-KSHVRRSK--IPGRLSTALCHHTKAVNSINWSPTHAH 159
++ D L D+L ++ L +++ K P +L + H+ VN ++ ++
Sbjct: 241 IIKKSDDNILSSDVLKHIKTLDIHKKIKKPKWHFPYKLYRVILGHSGWVNCVDVDISN-E 299
Query: 160 LLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDV 219
A+ D+ I IW++ S KL L H ++ D+K S++ ++ SCG D + D+
Sbjct: 300 WFATGSNDRLIKIWDLASCKLKLT--LTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDL 357
Query: 220 EKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
E + + L+ V + HP + +L +SGG ++R+WDIRT
Sbjct: 358 EYNKVIRDYHGHLSGVYCLSLHP-SLDLLMSGGRDAVVRVWDIRT 401
Score = 49 (22.3 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 377 CSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
CS S++ + +VSGS D I ++ + + + ++++ ++ HP
Sbjct: 419 CSQSVEPQ-VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHP 464
Score = 45 (20.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 382 DGEKLVSGSSDGSIYFYNCRS 402
D L+ GS++G ++FY+ S
Sbjct: 511 DSSILILGSNNGQLHFYDWSS 531
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 149 (57.5 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 44/165 (26%), Positives = 82/165 (49%)
Query: 103 VLGSISDAYLRQDILSLLRHLP-KSHVRRSK--IPGRLSTALCHHTKAVNSINWSPTHAH 159
++ D L D+L ++ L +++ K P +L + H+ VN ++ ++
Sbjct: 241 IIKKSDDNILSSDVLKHIKTLDIHKKIKKPKWHFPYKLYRVILGHSGWVNCVDVDISN-E 299
Query: 160 LLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDV 219
A+ D+ I IW++ S KL L H ++ D+K S++ ++ SCG D + D+
Sbjct: 300 WFATGSNDRLIKIWDLASCKLKLT--LTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDL 357
Query: 220 EKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
E + + L+ V + HP + +L +SGG ++R+WDIRT
Sbjct: 358 EYNKVIRDYHGHLSGVYCLSLHP-SLDLLMSGGRDAVVRVWDIRT 401
Score = 49 (22.3 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 377 CSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
CS S++ + +VSGS D I ++ + + + ++++ ++ HP
Sbjct: 419 CSQSVEPQ-VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHP 464
Score = 45 (20.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 382 DGEKLVSGSSDGSIYFYNCRS 402
D L+ GS++G ++FY+ S
Sbjct: 511 DSSILILGSNNGQLHFYDWSS 531
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 137 (53.3 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H K+ S++ + LAS D S+ +W++ S D+ +A + H+ V V W
Sbjct: 277 AIVFHPKSTVSLDQKDVN---LASCAADGSVKLWSLDS-DEPVADIEG-HTVRVARVTWH 331
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ + YD S RL D+E E + V + FH + S L +GG R+
Sbjct: 332 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGRV 390
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTING 286
WD+RTG+ L I + F+ NG
Sbjct: 391 WDLRTGRCIMFLEGHLKEIYGINFSPNG 418
Score = 60 (26.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS +G + +GS D + ++ R I A++ V F PI N + + +++
Sbjct: 413 NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 472
Query: 438 VSVY 441
++
Sbjct: 473 AKIW 476
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 78/317 (24%), Positives = 140/317 (44%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H VN +S + LLA+ +D++I ++ + + L FH+ AV+ +S
Sbjct: 8 LADHNDDVNCCAFSSS---LLATCALDKTIRLYFLSDFTEVPYSPLKFHTYAVHCCCFSP 64
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELA---VRVVKFHPENSNLFLSGGSKGLLR 257
G + SC D ++ L D + G + + E+ + VRV +F P+++ L +SG S G +
Sbjct: 65 SGHILASCSTDGTTVLWDTQNG-QILAVMEQPSGSPVRVCRFSPDSTCL-VSGASDGTVV 122
Query: 258 LWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLS 317
LW+ ++ K+ G ++ F G F + VWD S
Sbjct: 123 LWNAQSYKLHRCASVKDGSLVACAFFPPGNLFVTGSSCGD-------LTVWDDKMRCLHS 175
Query: 318 KQVYVEAYTCPCVRHHPFD------PYFVAQSNGNYIAIFSSTPPF-RLDKFK-RYESHG 369
++ + TC P +F S G I F + F+ +Y+S
Sbjct: 176 EKAHDLGITCCDFSSQPVPGGERGLQFFQLASCGQDCQIKIWVISFIHILGFELKYKST- 234
Query: 370 VSGF--PI-KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP-IL 425
++G P+ C+FS DG+ LVSGS D S+ Y+ + + + + + AF P IL
Sbjct: 235 LTGHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNIL 294
Query: 426 PNIIGSCSWNGDVSVYE 442
++ + S + V++++
Sbjct: 295 --LLATGSMDKTVNIWQ 309
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 78/317 (24%), Positives = 140/317 (44%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H VN +S + LLA+ +D++I ++ + + L FH+ AV+ +S
Sbjct: 8 LADHNDDVNCCAFSSS---LLATCALDKTIRLYFLSDFTEVPYSPLKFHTYAVHCCCFSP 64
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELA---VRVVKFHPENSNLFLSGGSKGLLR 257
G + SC D ++ L D + G + + E+ + VRV +F P+++ L +SG S G +
Sbjct: 65 SGHILASCSTDGTTVLWDTQNG-QILAVMEQPSGSPVRVCRFSPDSTCL-VSGASDGTVV 122
Query: 258 LWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLS 317
LW+ ++ K+ G ++ F G F + VWD S
Sbjct: 123 LWNAQSYKLHRCASVKDGSLVACAFFPPGNLFVTGSSCGD-------LTVWDDKMRCLHS 175
Query: 318 KQVYVEAYTCPCVRHHPFD------PYFVAQSNGNYIAIFSSTPPF-RLDKFK-RYESHG 369
++ + TC P +F S G I F + F+ +Y+S
Sbjct: 176 EKAHDLGITCCDFSSQPVPGGERGLQFFQLASCGQDCQIKIWVISFIHILGFELKYKST- 234
Query: 370 VSGF--PI-KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP-IL 425
++G P+ C+FS DG+ LVSGS D S+ Y+ + + + + + AF P IL
Sbjct: 235 LTGHCAPVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNIL 294
Query: 426 PNIIGSCSWNGDVSVYE 442
++ + S + V++++
Sbjct: 295 --LLATGSMDKTVNIWQ 309
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H K+ S++ + LAS D S+ +W++ S D+ +A + H+ V V W
Sbjct: 293 AIVFHPKSTVSLDQKDVN---LASCAADGSVKLWSLDS-DEPVADIEG-HTVRVARVMWH 347
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ + YD S RL D+E E + V + FH + S L +GG R+
Sbjct: 348 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGRV 406
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTING 286
WD+RTG+ L I + F+ NG
Sbjct: 407 WDLRTGRCIMFLEGHLKEIYGINFSPNG 434
Score = 60 (26.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS +G + +GS D + ++ R I A++ V F PI N + + +++
Sbjct: 429 NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 488
Query: 438 VSVY 441
++
Sbjct: 489 AKIW 492
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 137 (53.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H K+ S++ + LAS D S+ +W++ S D+ +A + H+ V V W
Sbjct: 295 AIVFHPKSTVSLDQKDVN---LASCAADGSVKLWSLDS-DEPVADIEG-HTVRVARVMWH 349
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ + YD S RL D+E E + V + FH + S L +GG R+
Sbjct: 350 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGRV 408
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTING 286
WD+RTG+ L I + F+ NG
Sbjct: 409 WDLRTGRCIMFLEGHLKEIYGINFSPNG 436
Score = 60 (26.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS +G + +GS D + ++ R I A++ V F PI N + + +++
Sbjct: 431 NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 490
Query: 438 VSVY 441
++
Sbjct: 491 AKIW 494
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 125 (49.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 139 TALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKW 198
T L H + VNSIN++ + L+ S G D+++ IW+V R K L HS V +
Sbjct: 41 TELHGHNECVNSINFNDDGS-LIVSGGDDETVRIWDVGKR--KCLTTLYGHSTNVFATNF 97
Query: 199 -SQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLR 257
+ V+S G D R D+E T V + P +FLS S G +R
Sbjct: 98 LNNDNRKVISGGNDADIRYYDIENQKCTVYKHHSKKVLKLSVCPTQPQVFLSSSSDGSVR 157
Query: 258 LWDIR 262
L+D+R
Sbjct: 158 LFDVR 162
Score = 78 (32.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 352 SSTPPFRLDKFKRYESHGVSGFPIKCS--FSLDGEKLVSGSSDGSIYFYNCRSSELERKI 409
+++ PF FK+ S VS IK + + E +VSGS D ++ ++ S+++ R +
Sbjct: 759 NNSKPFLPKTFKQVYSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVRIL 818
Query: 410 KAYEQACIDVAFHPILPNIIGS 431
+ ++ V HP P I S
Sbjct: 819 EGHDSHVNSVVCHPNEPCIATS 840
Score = 73 (30.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 330 VRHHPFDPY-FVAQSNGNYIAIFSST--PPFRLDKFKR-YESHGVSGFPIK-----CSFS 380
V +HPFD Y F+ S+ + +F P + F Y + V FP + C+FS
Sbjct: 275 VEYHPFDGYSFITASSDGTVRLFDQRMIPNHSSESFVNIYRNIEVP-FPSEDEATGCAFS 333
Query: 381 LDGEKLVSGSSDGSIYFYNCRSS 403
+G ++V + +IY Y+ + +
Sbjct: 334 KNGNEIVVTYLNDNIYLYDLKKN 356
Score = 57 (25.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 387 VSGSSDGSIYFYNCRSSELERKIKAYEQA-CIDVAFHPILPNIIG 430
+S SSDGS+ ++ R + +I+ + A + + ILP +IG
Sbjct: 148 LSSSSDGSVRLFDVRLKYKDTEIQPIQTAPSNNDGYRAILPQVIG 192
>UNIPROTKB|E7EW44 [details] [associations]
symbol:CORO1B "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AP003419 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2253
IPI:IPI00908316 ProteinModelPortal:E7EW44 SMR:E7EW44
Ensembl:ENST00000453768 UCSC:uc010rps.1 ArrayExpress:E7EW44
Bgee:E7EW44 Uniprot:E7EW44
Length = 289
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V I W PT ++L SAG D + IWNV + ++ L R+ + H + +V W+ G
Sbjct: 131 HTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNHNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCSACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 248
Query: 258 LWDIRTGKVAHEYIQSLGP 276
LWD +G+ ++ LGP
Sbjct: 249 LWDPVSGQPEGANLR-LGP 266
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 148 (57.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ V ++SP +LL+S+ D ++ +W++ Q ++ + H+ V D ++S
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSE-DGTVRLWSL----QTFTCLVGYKGHNYPVWDTQFSPY 596
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
G + +S G+D +RL + + F LA V +FHP NSN +G + +RLWD
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWD 655
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GPI + F+ NG+
Sbjct: 656 VLNGNCVRIFTGHKGPIHSLTFSPNGR 682
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/121 (23%), Positives = 48/121 (39%)
Query: 12 SDDEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLHRPNQQHSGLRTEASVAGRY 71
++++ E A K EPE PP T + PN + +S G
Sbjct: 5 AEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNG---PNGGGGNVAASSSTGGDG 61
Query: 72 MSKRERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRS 131
+ + + PA P P AAA G+ D RQ +L++L+ L +S +R +
Sbjct: 62 GTPKPTVAVSAAAPAGAAPVP------AAAPDAGAPHD---RQTLLAVLQFLRQSKLREA 112
Query: 132 K 132
+
Sbjct: 113 E 113
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 81 GPGIPA-----ATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRH 122
GP P A + +PD SAV++A G D + ++ S L+H
Sbjct: 180 GPAAPGKVGSVAVEDQPDVSAVLSAYNQQG---DPTMYEEYYSGLKH 223
Score = 37 (18.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 82 PGIPAATDPKPDPSAVVAAAQVLGSIS 108
PG PAA DP P A A V GS S
Sbjct: 156 PG-PAAPDP-PGTGAS-GATVVSGSAS 179
>UNIPROTKB|Q17QU5 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0050731 GO:GO:0030838 GO:GO:0032314 KO:K08266 GO:GO:0032008
EMBL:BT021562 EMBL:BC118176 IPI:IPI00908071 RefSeq:NP_001030488.1
UniGene:Bt.3376 ProteinModelPortal:Q17QU5 STRING:Q17QU5
PRIDE:Q17QU5 Ensembl:ENSBTAT00000013104 Ensembl:ENSBTAT00000053181
GeneID:535236 KEGG:bta:535236 CTD:64223
GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 NextBio:20876671
ArrayExpress:Q17QU5 Uniprot:Q17QU5
Length = 326
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 63/296 (21%), Positives = 130/296 (43%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VN++ +P ++A+AG Q I ++++ S + ++++ N V + +
Sbjct: 40 HQDSQVNALEITPDRT-MIAAAGY-QHIRMYDLNSNNPN--PIISYDGVNKNVASVGFHE 95
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC++R+ D+ + ++ Q F+ + V HP + L + G G + +
Sbjct: 96 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV-GDQSGAIHI 154
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T ++ + L P + E +I VW +V
Sbjct: 155 WDLKT-----DHNEQLIP--EPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEV 207
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRL--DKFKRYESH 368
++ +P +K Y C R P D +A + + T F L + + +
Sbjct: 208 TQLIPKTKIPAHTRYALQC-RFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSSNP 265
Query: 369 GVS--GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G S G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 266 GESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAVVCLAFN 321
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 146 (56.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 45/150 (30%), Positives = 74/150 (49%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H +A ++ S + +AS D S+ +W++ S D+ +A + HS V V W
Sbjct: 263 AISFHPQATLTLEESDVN---MASCAADGSVKLWSLDS-DEPIADIEG-HSMRVARVTWH 317
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFREE---LAVRVVKFHPENSNLFLSGGSKGLL 256
G F+ + YD S RL D+E ++ + +E V + FHP+ S L +GG
Sbjct: 318 PSGRFLGTTCYDHSWRLWDLE--VQEEILHQEGHSKGVHDLHFHPDGS-LAGTGGLDSFA 374
Query: 257 RLWDIRTGKVAHEYIQSLGPILDVEFTING 286
R+WD+RTG+ + I + F+ NG
Sbjct: 375 RVWDLRTGRCVMFLEGHIKEIYSINFSPNG 404
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
+FS +G + +GS D + ++ R I A++ V F P
Sbjct: 399 NFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQP 444
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 157 (60.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 138 STALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVND 195
S L H+ V +++SP +LL+S+ D +I +W++ Q ++ + H+ V D
Sbjct: 492 SKILHGHSGPVYGVSFSPDRNYLLSSSE-DGTIRLWSL----QTFTCLVGYKGHNYPVWD 546
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKG 254
++S G + +S G+D +RL + + F LA V +FHP NSN +G S
Sbjct: 547 TQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP-NSNYVATGSSDR 605
Query: 255 LLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+RLWD+ G + GPI + F+ NGK
Sbjct: 606 TVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGK 638
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 85 PAATDPKP-DPSAVVAAAQVL--GSISDAY--LRQDILSLLRHLPKSH 127
PAA PKP D ++A Q L ++++ LR++ L L SH
Sbjct: 60 PAAGAPKPEDQQTLLAVLQFLKRSKLAESVEILRREA-GLAEELEDSH 106
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 137 (53.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H K+ S++ + LAS D S+ +W++ S D+ +A + H+ V V W
Sbjct: 277 AIVFHPKSTVSLDQKDVN---LASCAADGSVKLWSLDS-DEPVADIEG-HTVRVARVMWH 331
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ + YD S RL D+E E + V + FH + S L +GG R+
Sbjct: 332 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGRV 390
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTING 286
WD+RTG+ L I + F+ NG
Sbjct: 391 WDLRTGRCIMFLEGHLKEIYGISFSPNG 418
Score = 58 (25.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPI 424
SFS +G + +GS D + ++ R I A++ V F PI
Sbjct: 413 SFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 459
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L H V S++W PT + LL S G D + +W+ S ++L R + H V VKW+
Sbjct: 86 SLTGHGWDVKSVDWHPTKS-LLVSGGKDYLVKLWDAKS-GREL-RSFHGHKNIVQCVKWN 142
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRL 258
Q G +VL+ D +L D+ E +SFR V + +HP + F+SG G +
Sbjct: 143 QNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFH 202
Query: 259 W 259
W
Sbjct: 203 W 203
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00052
Identities = 60/262 (22%), Positives = 111/262 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H +AV S+ WS + + + + +I W + K+ + H +V D+ + + L
Sbjct: 6 HDQAVRSMIWS-NNENWMVTGDDGGAIKYWQSNMNNVKVNKTA--HRESVRDLSFCRTDL 62
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREE-LAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
SC D + ++ D + E +S V+ V +HP S L +SGG L++LWD +
Sbjct: 63 KFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKS-LLVSGGKDYLVKLWDAK 121
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+G+ + + V++ NG I ++D+ R + +
Sbjct: 122 SGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQI-------IKLYDI-RSMKELESFRG 173
Query: 323 EAYTCPCVRHHPF-DPYFVAQSNGNYI-AIFSSTPPFRLDKFKRYESHGVSGFPIKCSFS 380
+ HPF + YFV+ G+Y AIF + + +H S + + ++
Sbjct: 174 HNKDVTALAWHPFHEEYFVS---GSYDGAIFHWLVGHETPQIEINNAHDNSVWDL--AWH 228
Query: 381 LDGEKLVSGSSDGSIYFYNCRS 402
G L SG +D + F+ CR+
Sbjct: 229 PVGYLLCSGGNDHATRFW-CRN 249
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 115 (45.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/121 (22%), Positives = 56/121 (46%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H +++ WSP ++A+ G D+ + +W++ + VL+ SA +N V + G
Sbjct: 317 HENESHAVRWSPVE-RMVATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTGA 375
Query: 204 FVLSCGYDCSSRLVDV-EKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
++L D +R+ V + + V K+ E + ++G L++WD+R
Sbjct: 376 YILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKV-VTGSHDRTLKIWDLR 434
Query: 263 T 263
+
Sbjct: 435 S 435
Score = 109 (43.4 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 148 VNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLS 207
+NS+++ T A++L ++ D +W V D +L L HS V K+ Q+ + V++
Sbjct: 365 INSVDFDSTGAYILGTSN-DYGARVWTVM--DNRLRHTLTGHSGKVMAAKYVQEPIKVVT 421
Query: 208 CGYDCSSRLVDVEK--GIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGK 265
+D + ++ D+ IET+ F +V S + +SG +R WDIRT K
Sbjct: 422 GSHDRTLKIWDLRSIACIETK-FAGSSCNDLVTTDSLGSTI-ISGHYDKKIRFWDIRTEK 479
Query: 266 VAHEYI 271
A + +
Sbjct: 480 QADDVL 485
Score = 83 (34.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWN 435
+ SF+ G K+ GS+DG+IY +N LE +K + A V++ P N++ S N
Sbjct: 538 RASFNSSGLKIACGSADGAIYIWNVNGF-LEATLKGHSTAVNAVSWSPN-NNMLASVGKN 595
Query: 436 GDVSVY 441
++Y
Sbjct: 596 KRCTIY 601
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 135 (52.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 91/394 (23%), Positives = 154/394 (39%)
Query: 21 KHEPELRSIFSPPSKRPRP-DYPYPQTKPHPL--HRPNQQHSGLRTEASVAGR-YMSKRE 76
+HE E R + S P + P P P H P+ G+ +G Y
Sbjct: 103 RHELESRGVQPVASHVAVPAQHGGPSQAPPPALGHGPSNLFGGIMANQGGSGPGYQPGAA 162
Query: 77 RALLGPGIPAATDPKPD--PSAVVAAAQVLGSISDAYLRQDIL-SLLRHLPKSH-VRRSK 132
GP P P P P A A + AY + L R P + V R +
Sbjct: 163 VNGYGPPPPPTASPGPGKRPRAPPGPATPQQAHQLAYPESRVSPQLARPTPPNQPVVRDR 222
Query: 133 IPGRLSTALCHHTKAVNSINWSPTHAH-LLASAGMDQSICIWNVWSR---DQKLARVLNF 188
PG + NW+P G+D ++N + D +L L
Sbjct: 223 -PGNMLA------------NWNPEDLPPSQKKEGVDW-YAVFNPEVQRVLDVELVHHL-V 267
Query: 189 HSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREE-------LAVRVVKFHP 241
H + V V++S+ G + L+ G + S+++ DV G ++E L +R V F P
Sbjct: 268 HDSVVCCVRFSRDGKY-LATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 242 ENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXX 301
+ L +G +R+WDI T + H + I ++F NG+
Sbjct: 327 DGKYL-ATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKT---- 381
Query: 302 XXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDK 361
+ +WD++ E L + +E V P Y A S + ++ +T + +++
Sbjct: 382 ---VRLWDIA-EGKLVYTLSIEDGVTT-VAMSPDGLYVAAGSLDKTVRVWDTTTGYLVER 436
Query: 362 FKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSI 395
+ + H S + + +F+ +G++LVSGS D +I
Sbjct: 437 LENPDGHKDSVYSV--AFAPNGKELVSGSLDKTI 468
Score = 61 (26.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 363 KRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
+ +E H F + + DG ++SGS D + F++ + + ++ ++ + I VA
Sbjct: 491 RTFEGH--KDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPS 548
Query: 423 P 423
P
Sbjct: 549 P 549
>UNIPROTKB|Q9BVC4 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9606 "Homo sapiens" [GO:0030838 "positive regulation of
actin filament polymerization" evidence=IEA] [GO:0032314
"regulation of Rac GTPase activity" evidence=IEA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032008
"positive regulation of TOR signaling cascade" evidence=IMP]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0005829 "cytosol" evidence=TAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0008286 "insulin receptor signaling pathway" evidence=TAS]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=TAS] [GO:0031295 "T cell costimulation" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Pathway_Interaction_DB:pi3kciaktpathway
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007173 GO:GO:0008543 GO:GO:0008286 GO:GO:0048011
Pathway_Interaction_DB:mtor_4pathway Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031295
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112
GO:GO:0050731 GO:GO:0030838 GO:GO:0048015 GO:GO:0032314
GO:GO:0032956 EMBL:AC009065 KO:K08266 GO:GO:0032008 CTD:64223
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 OMA:NNKGNCY EMBL:AY223837
EMBL:AK021536 EMBL:AK022227 EMBL:AK302201 EMBL:BC001313
EMBL:BC017119 EMBL:BC052292 EMBL:BC088354 EMBL:AF195883
IPI:IPI00007182 IPI:IPI00102926 IPI:IPI00420058
RefSeq:NP_001186102.1 RefSeq:NP_001186103.1 RefSeq:NP_001186104.1
RefSeq:NP_071767.3 UniGene:Hs.29203 ProteinModelPortal:Q9BVC4
SMR:Q9BVC4 IntAct:Q9BVC4 STRING:Q9BVC4 PhosphoSite:Q9BVC4
DMDM:74761285 PaxDb:Q9BVC4 PRIDE:Q9BVC4 DNASU:64223
Ensembl:ENST00000301724 Ensembl:ENST00000301725
Ensembl:ENST00000382450 Ensembl:ENST00000397124
Ensembl:ENST00000564088 Ensembl:ENST00000565250
Ensembl:ENST00000569417 GeneID:64223 KEGG:hsa:64223 UCSC:uc002coy.3
GeneCards:GC16P002254 H-InvDB:HIX0012725 HGNC:HGNC:24825
HPA:CAB019935 MIM:612190 neXtProt:NX_Q9BVC4 PharmGKB:PA165450213
GenomeRNAi:64223 NextBio:66155 Bgee:Q9BVC4 Genevestigator:Q9BVC4
Uniprot:Q9BVC4
Length = 326
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 64/296 (21%), Positives = 130/296 (43%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQ 200
H VN++ +P + ++A+AG Q I ++++ S + ++++ N V + +
Sbjct: 40 HQDSQVNALEVTPDRS-MIAAAGY-QHIRMYDLNSNNPN--PIISYDGVNKNIASVGFHE 95
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G ++ + G DC++R+ D+ + ++ Q F+ + V HP + L + G G + +
Sbjct: 96 DGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV-GDQSGAIHI 154
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DV 310
WD++T ++ + L P + E +I VW +V
Sbjct: 155 WDLKT-----DHNEQLIP--EPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIGDEV 207
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESH-- 368
++ +P +K Y C R P D +A + + T F L +S
Sbjct: 208 TQLIPKTKIPAHTRYALQC-RFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSGNP 265
Query: 369 GVS--GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G S G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 266 GESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAVVCLAFN 321
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 145 (56.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 41/147 (27%), Positives = 74/147 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ V ++SP +LL+S+ D ++ +W++ Q ++ + H+ V D ++S
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSE-DGTVRLWSL----QTFTCLVGYKGHNYPVWDTQFSPY 597
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
G + +S G+D +RL + + F LA V ++HP NSN +G + +RLWD
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHP-NSNYVATGSADRTVRLWD 656
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GPI + F+ NG+
Sbjct: 657 VLNGNCVRIFTGHKGPIHSLTFSPNGR 683
Score = 54 (24.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 30/121 (24%), Positives = 51/121 (42%)
Query: 12 SDDEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLHRPNQQHSGLRTEASVAGRY 71
++++ E A K EPE PP D + P + PN G A+ AG
Sbjct: 5 AEEQTEVAVKLEPEGPPTLLPPQAG---DGAGEGSGGTPNNGPNGGGGGNVAVAAAAGG- 60
Query: 72 MSKRERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRS 131
+ PG+ + + V AA G+ D RQ +L++L+ L +S++R +
Sbjct: 61 ----DGGTPKPGVAVSAAAPAGAAPVPAAPAEAGAPHD---RQTLLAVLQFLRQSNLREA 113
Query: 132 K 132
+
Sbjct: 114 E 114
Score = 44 (20.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 63 TEASVAGRYM-SKRERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLR 121
T ASV + S A G A + +PD SAV++A G D + ++ S L+
Sbjct: 167 TGASVTSVFSGSASGPAAPGKVASVAVEDQPDVSAVLSAYNQQG---DPTMYEEYYSGLK 223
Query: 122 H 122
H
Sbjct: 224 H 224
Score = 43 (20.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 22/85 (25%), Positives = 29/85 (34%)
Query: 28 SIFSPPSKRPRPDYPYPQTKPHP---LHRPNQ--QHSGLRTEASVAGRYMSKRERALLGP 82
S +P P P P PH L Q + S LR R E A+ G
Sbjct: 72 SAAAPAGAAPVPAAPAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREARLLEEAVAGS 131
Query: 83 GIPAATDPKPDPSAVVAAAQVLGSI 107
G P D +A ++V S+
Sbjct: 132 GAPGELDGAGAEAASALLSRVTASV 156
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 72/296 (24%), Positives = 120/296 (40%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H+ VN +S + LA+ +D++I I+++ + L H+ AV+ +S
Sbjct: 8 LTDHSDDVNCCAFSSS---CLATCSLDKTIRIYSLNDFTELPYSPLKGHTYAVHCCCFSP 64
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELA--VRVVKFHPENSNLFLSGGSKGLLRL 258
G + SC D ++ + D G + VRV +F PE++ L +SG + G + L
Sbjct: 65 SGHTLASCSTDGATIIWDTSDGRMLAVLEQPTGSPVRVCRFSPESTYL-VSGAADGSVVL 123
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK 318
W++ + K G ++ F+ G F + VWD ++
Sbjct: 124 WNVHSMKFYRSGNVKDGSLVACAFSPGGNFFVTGSSCGD-------LTVWDDKMRCLCNE 176
Query: 319 QVYVEAYTCPCVRHHPFDP------YFVAQSNG--NYIAI-FSSTPPFRLDKFKRYES-- 367
+ + TC + HP F S G N I + F F L RY+
Sbjct: 177 KAHDLGVTCCDISSHPVSDGEHASGCFQMASCGQDNKIKVWFILFADF-LGGELRYKCTL 235
Query: 368 HGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
G S + C+FS DG+ LVSGS D + Y + + + + + AF P
Sbjct: 236 SGHSAPVLTCAFSYDGQMLVSGSVDKCVIIYETNTGNILHTLSQHTRYVTTCAFAP 291
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 124 (48.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 46/170 (27%), Positives = 85/170 (50%)
Query: 101 AQVLGSISDAYLRQDILSLLRHLPKS-HVRRSKIPGRL-STALCH----HTKAVNSINWS 154
A +L SIS+ + R+ ++ P++ V + R+ STAL H H VN++ +S
Sbjct: 268 AGLLDSISNMFGRRRSVNSFSSSPENAEVPSACADVRVPSTAL-HIFDAHDGEVNAVRFS 326
Query: 155 PTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSS 214
P + LLA+ GMD+ + +W V S + L +A + +++ G ++L+ D +S
Sbjct: 327 PG-SRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFAS 385
Query: 215 RLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
R+ V+ + V +F +N+ + +SG L+LWD+R+
Sbjct: 386 RIWTVDDYRLRHTLTGHSGKVLSARFLLDNARI-VSGSYDRTLKLWDLRS 434
Score = 73 (30.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 376 KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKI-KAYEQACIDVAF 421
+ +FS DG + +GS+DG +Y +N + +LE+ + K + A V++
Sbjct: 537 RVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSW 583
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 153 (58.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 53/182 (29%), Positives = 89/182 (48%)
Query: 93 DPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKI-PGRLSTALCHHTKAVNSI 151
D S +VAA D+Y++ + SL KS ++R + P + L H+ V +
Sbjct: 471 DDSTLVAAG-----FQDSYIK--LWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGV 523
Query: 152 NWSPTHAHLLASAGMDQSICIWNVWSRDQKLARV-LNFHSAAVNDVKWSQQGLFVLSCGY 210
++SP + +LL S D+++ +WS D A V H+ V DVK+S G + ++ +
Sbjct: 524 SFSPDNKYLL-SCSEDKTV---RLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASH 579
Query: 211 DCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHE 269
D ++RL + + F + V V+FHP NSN +G S R+WD+ TG
Sbjct: 580 DQTARLWATDHIYPLRIFAGHINDVDCVEFHP-NSNYVFTGSSDKTCRMWDVHTGNCVRV 638
Query: 270 YI 271
++
Sbjct: 639 FL 640
Score = 45 (20.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 34 SKRPRPDYPYPQTKPHPLHRPNQQHSGLRTEASVAGRYMSKRERA 78
S P P P P + QQ S + + S G S + R+
Sbjct: 26 SGNSEPSAPTPAQVPSVQQQQQQQKSSTQNQQSTTGSARSSQGRS 70
>UNIPROTKB|F1MVT2 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 IPI:IPI00710208 UniGene:Bt.20137
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:DAAA02028032 ProteinModelPortal:F1MVT2
Ensembl:ENSBTAT00000028515 ArrayExpress:F1MVT2 Uniprot:F1MVT2
Length = 546
Score = 117 (46.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACI-DV 419
Y HGV I+C FS G++ + SG S G + Y+ S + +K+ ++ AC+ DV
Sbjct: 431 YRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTTHK-ACVRDV 489
Query: 420 AFHPILPNIIGSCSWNGDVSVYE 442
++HP I+ S SW+G++ +++
Sbjct: 490 SWHPFEEKIVSS-SWDGNLRLWQ 511
Score = 78 (32.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 35/121 (28%), Positives = 51/121 (42%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSR-DQKLARVL--NFHSAAVNDVKWSQQGL 203
+V + ++P H L S+ D I I N++ D A L + AV + S G
Sbjct: 220 SVLDVAFTPDGNHFLYSSWSDY-IHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGR 278
Query: 204 FVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL D + D E+ T Q E V V F +S + SGG + ++WD R
Sbjct: 279 EVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADVSSQILFSGGDDAICKVWDRR 338
Query: 263 T 263
T
Sbjct: 339 T 339
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSR------DQKLARVLNFHSAAVNDVK 197
H VN++ ++ + +L S G D +IC VW R D K L H + +
Sbjct: 306 HEDDVNAVAFADVSSQILFSGG-DDAIC--KVWDRRTMREDDPKPVGALAGHQDGITFID 362
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
+++S D + +L D+ +
Sbjct: 363 SKGDARYLISNSKDQTIKLWDIRR 386
Score = 55 (24.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAH-EYIQS--LG-PILDVEFTINGKQF 289
+ ++ +F+S +RL+D R G+ + I++ +G +LDV FT +G F
Sbjct: 180 YSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHF 233
Score = 45 (20.9 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 125 KSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLAR 184
+S V +P L + KA I +S + SA DQ+I ++ D + R
Sbjct: 153 RSRVMSHFLPNDLGFTDTYSQKAFCGI-YSKD-GQIFMSACQDQTIRLY-----DCRYGR 205
Query: 185 VLNFHSAAVNDVKWS 199
F S DV WS
Sbjct: 206 FRKFKSIKARDVGWS 220
Score = 37 (18.1 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 247 FLSGGSKG-LLRLWDIR 262
+L SK ++LWDIR
Sbjct: 369 YLISNSKDQTIKLWDIR 385
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 108 (43.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 178 RDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKG--IETQSFREEL-AV 234
R R HSA V+ V WS G + S +D ++ + +EK ++ ++R +V
Sbjct: 43 RGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSV 102
Query: 235 RVVKFHPENSNLFLSGGSKGLLRLWDIRTGK 265
+ +HP N +LF++ +R+WD+RT K
Sbjct: 103 DQLCWHPSNPDLFVTASGDKTIRIWDVRTTK 133
Score = 82 (33.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/111 (27%), Positives = 50/111 (45%)
Query: 327 CPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKC-SFSLDGEK 385
C C++ P YF S ++++ + F R + +P++ SFS DG+
Sbjct: 227 CICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLD------WPVRTLSFSHDGKM 280
Query: 386 LVSGSSDGSIYFYNCRSSELERKIKAYEQAC----IDVAFHPILPNIIGSC 432
L S S D +F + +E+E K +E C VA+HP P + +C
Sbjct: 281 LASASED---HFIDI--AEVETGDKLWEVQCESPTFTVAWHPKRPLLAFAC 326
>UNIPROTKB|Q5R7H5 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 GO:GO:0080008 CTD:80344 HOGENOM:HOG000241217
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:CR857585
EMBL:CR860141 RefSeq:NP_001126335.1 RefSeq:NP_001128756.1
UniGene:Pab.18820 UniGene:Pab.19847 ProteinModelPortal:Q5R7H5
GeneID:100173316 GeneID:100189652 KEGG:pon:100173316
KEGG:pon:100189652 InParanoid:Q5R7H5 Uniprot:Q5R7H5
Length = 546
Score = 115 (45.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACI-DV 419
Y HGV I+C FS G++ + SG S G + Y+ S + +K+ ++ AC+ DV
Sbjct: 431 YRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK-ACVRDV 489
Query: 420 AFHPILPNIIGSCSWNGDVSVYE 442
++HP I+ S SW+G++ +++
Sbjct: 490 SWHPFEEKIVSS-SWDGNLRLWQ 511
Score = 80 (33.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 35/121 (28%), Positives = 52/121 (42%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSR-DQKLARVL--NFHSAAVNDVKWSQQGL 203
+V + ++P +H L S+ D I I N++ D A L + AV + S G
Sbjct: 220 SVLDVAFTPDGSHFLYSSWSDY-IHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGR 278
Query: 204 FVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL D + D E+ T Q E V V F +S + SGG + ++WD R
Sbjct: 279 EVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWDRR 338
Query: 263 T 263
T
Sbjct: 339 T 339
Score = 57 (25.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSR------DQKLARVLNFHSAAVNDVK 197
H VN++ ++ + +L S G D +IC VW R D K L H + +
Sbjct: 306 HEDDVNAVAFADISSQILFSGG-DDAIC--KVWDRRTMREDDPKPVGALAGHQDGITFID 362
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
+++S D + +L D+ +
Sbjct: 363 SKGDARYLISNSKDQTIKLWDIRR 386
Score = 55 (24.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAH-EYIQS--LG-PILDVEFTINGKQF 289
+ ++ +F+S +RL+D R G+ + I++ +G +LDV FT +G F
Sbjct: 180 YSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGSHF 233
>DICTYBASE|DDB_G0285847 [details] [associations]
symbol:rbbE "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0285847 GO:GO:0005634
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000082 KO:K14961
OMA:VNRLQWN RefSeq:XP_638014.1 ProteinModelPortal:Q54MH6
STRING:Q54MH6 EnsemblProtists:DDB0191415 GeneID:8625365
KEGG:ddi:DDB_G0285847 InParanoid:Q54MH6 ProtClustDB:CLSZ2728907
Uniprot:Q54MH6
Length = 525
Score = 107 (42.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 175 VWSRD-QKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA 233
VW D +K+ R L H+ VN + WS+ G +L+ D S L D+ S E
Sbjct: 55 VWDFDTKKIVRTLYHHTGCVNSISWSRNGKKLLTASNDGSLVLWDLATSKILYSLELESP 114
Query: 234 VRVVKFHPENSNLFLSGGSKG 254
+ +FHP N++L L KG
Sbjct: 115 ILFAEFHPRNNDLCLIVLQKG 135
Score = 88 (36.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 376 KCSFSLDGEKLVSGSSDGSIY--FYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
KC FS + E +V G + SI+ F S L + ++ ++ +DV +HP+ P II S S
Sbjct: 276 KCCFSSNNEYVVGGMNHKSIHSIFIWSVSGSLVKDLEGPKEGLVDVVWHPLRP-IIVSIS 334
Query: 434 WNGDVSVY 441
+ G + V+
Sbjct: 335 FTGVIYVW 342
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNV 175
++ L HHT VNSI+WS LL +A D S+ +W++
Sbjct: 62 KIVRTLYHHTGCVNSISWSRNGKKLL-TASNDGSLVLWDL 100
Score = 39 (18.8 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 190 SAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFRE 230
+ V +++S+ F+L D RL+ +E Q RE
Sbjct: 224 NTTVKQIEFSRNHRFMLVSSSDKVLRLISLESTNLYQQMRE 264
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 62/274 (22%), Positives = 117/274 (42%)
Query: 161 LASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVE 220
+AS MD+SI +W + D + +L+ H A+ D++WS+ + S D D+
Sbjct: 75 IASGSMDRSILLWRA-NGDCENYGILSGHRGAILDLQWSRDSDIIFSASADMHLASWDLT 133
Query: 221 KGIETQSF--REELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPIL 278
G + + EE+ + + + SG G + +WD R K A +YI+S P+
Sbjct: 134 TGERIRRYVGHEEV-INSLDISKRGEEILFSGSDDGTIGIWDPRK-KHAADYIESDFPVT 191
Query: 279 DVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYVEAYTCPCVRHHPFDPY 338
V + G + I VWDV ++ + T ++ P D
Sbjct: 192 AVAISEAGNEIYSGGIDND-------IKVWDVRKKAVVYNMAG-HRDTITTLKVSP-D-- 240
Query: 339 FVAQSNGNYIAIFSSTPPFRLDKFKRYESH--GVSGFP-------IKCSFSLDGEKLVSG 389
+QS +Y A+ S+ + + F E H G P ++ + +G+++ G
Sbjct: 241 --SQSLLSY-AMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGKRVAMG 297
Query: 390 SSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
++DG++ ++ + +L K+ ++ A V F P
Sbjct: 298 AADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSP 331
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V ++W P + L+ S G D +I IW+ S Q + L+ H + V+ V+W+Q
Sbjct: 247 LVGHGWDVKCVSWHPQKS-LIVSGGKDNNIKIWDAKS-SQNIT-TLHGHKSTVSKVEWNQ 303
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREE-LAVRVVKFHPENSNLFLSGGSKGLLRLW 259
G +++S D ++ D+ E Q+F+ V + HP + +LF+SG G + W
Sbjct: 304 NGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYW 363
>UNIPROTKB|F1MK51 [details] [associations]
symbol:CORO1B "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 EMBL:DAAA02063620 EMBL:DAAA02063621
IPI:IPI00699043 Ensembl:ENSBTAT00000006281 ArrayExpress:F1MK51
Uniprot:F1MK51
Length = 330
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V + W PT ++L SAG D + IWNV + ++ L R+ + H + +V W++ G
Sbjct: 130 HTKRVGIVTWHPTARNVLLSAGCDNMVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNRNGS 188
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 189 LFCTACK-DKSVRVIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 247
Query: 258 LWD 260
LWD
Sbjct: 248 LWD 250
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 38/144 (26%), Positives = 73/144 (50%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+LC HT V+S+ ++ +LA A I +W++ + K+ R H + + V++
Sbjct: 53 SLCGHTSPVDSVAFNSEEVLVLAGASSGV-IKLWDL--EESKMVRAFTGHRSNCSAVEFH 109
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL-AVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ S D + R+ D K Q+++ + ++F P+ +SGG ++++
Sbjct: 110 PFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDG-RWVVSGGLDNVVKV 168
Query: 259 WDIRTGKVAHEYIQSLGPILDVEF 282
WD+ GK+ HE+ GPI ++F
Sbjct: 169 WDLTAGKLLHEFKCHEGPIRSLDF 192
Score = 130 (50.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 61/263 (23%), Positives = 107/263 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ VN ++ + LL + G D + +W++ ++ L H++ V+ V ++ + +
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMS--LCGHTSPVDSVAFNSEEV 71
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL+ +L D+E+ ++F + V+FHP L SG S LR+WD R
Sbjct: 72 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL-ASGSSDTNLRVWDTR 130
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
Y I +EF+ +G+ + VWD++ L +
Sbjct: 131 KKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNV-------VKVWDLTAGKLLHEFKCH 183
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLD 382
E + HP + + +A + + F F L R E+ GV +F D
Sbjct: 184 EG-PIRSLDFHPLE-FLLATGSADRTVKFWDLETFELIGTTRPEATGVRAI----AFHPD 237
Query: 383 GEKLVSGSSDG-SIYFYN---CR 401
G+ L G DG +Y + CR
Sbjct: 238 GQTLFCGLDDGLKVYSWEPVICR 260
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 144 (55.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 139 TALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDV 196
++L HT+ V ++ SP +L S D +WS+D K + ++ + H+A + DV
Sbjct: 397 SSLIGHTRPVFGVSISPQKEFIL-SCSEDG---FTRLWSKDTK-STIVKYAGHNAPIWDV 451
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSF-REELAVRVVKFHPENSNLFLSGGSKGL 255
++S G + + +D ++RL DVE + F + V V FHP N+ +G S
Sbjct: 452 QFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHP-NAAYLATGSSDHT 510
Query: 256 LRLWDIRTGKVAHEYIQSLGPI 277
R+WD+RTG + P+
Sbjct: 511 TRMWDVRTGGTVRVFNAHHSPV 532
Score = 50 (22.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYN 399
SFS D + LVSG +D + F++
Sbjct: 578 SFSYDNKILVSGGADTDVNFWD 599
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 137 (53.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H K+ S++ + LAS D S+ +W++ S D+ +A + H+ V V W
Sbjct: 277 AIVFHPKSTVSLDQKDVN---LASCAADGSVKLWSLDS-DEPVADIEG-HTVRVARVMWH 331
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ + YD S RL D+E E + V + FH + S L +GG R+
Sbjct: 332 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS-LAGTGGLDAFGRV 390
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTING 286
WD+RTG+ L I + F+ NG
Sbjct: 391 WDLRTGRCIMFLEGHLKEIYGINFSPNG 418
Score = 55 (24.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPI 424
+FS +G + +GS D + ++ R I A++ V F PI
Sbjct: 413 NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 459
>TAIR|locus:2181733 [details] [associations]
symbol:AT5G02430 "AT5G02430" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AL162971 HOGENOM:HOG000239143
ProtClustDB:CLSN2683085 IPI:IPI00534660 PIR:T48264
RefSeq:NP_195863.1 UniGene:At.54687 ProteinModelPortal:Q9LZ59
SMR:Q9LZ59 PaxDb:Q9LZ59 PRIDE:Q9LZ59 EnsemblPlants:AT5G02430.1
GeneID:831780 KEGG:ath:AT5G02430 TAIR:At5g02430 InParanoid:Q9LZ59
OMA:RRENANS PhylomeDB:Q9LZ59 Genevestigator:Q9LZ59 Uniprot:Q9LZ59
Length = 905
Score = 124 (48.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 52/251 (20%), Positives = 99/251 (39%)
Query: 189 HSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFL 248
H V D+ WS+ L +LS D + RL D+E + F V V+F+P + + F+
Sbjct: 518 HLDDVLDLSWSRSQL-LLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFI 576
Query: 249 SGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW 308
SG +R+W+I +V E+ + V +T +G+
Sbjct: 577 SGSLDAKIRIWNISNRQVV-EWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSAEDCKL 635
Query: 309 DVSREVPLSKQVYVEAYTCPCVRHHPFDPYFV-AQSNGNYIAIFSSTPPFRLDKFKRYES 367
+ + ++ L + +A + P +P V S + I + T + KF+ +++
Sbjct: 636 EQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSADSRIRVLDGTE--LVQKFRGFKN 693
Query: 368 HGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPN 427
+ S+++D + +V S D +Y + L + C P +
Sbjct: 694 MNSQ---MTASYTVDAKHIVCASEDSQVYVWKHEEPRLGITGRKTVTMCTSYETFPC-KD 749
Query: 428 IIGSCSWNGDV 438
+ + WNG V
Sbjct: 750 VSVAVPWNGVV 760
Score = 75 (31.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 120 LRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNV 175
+RH KSH S + + + H + ++ +SP +HLLASAG D +I +W V
Sbjct: 388 VRHSGKSHKDLSAL--HMCQEIQAHQGGIWTMKFSPD-SHLLASAGEDCAIHVWEV 440
>UNIPROTKB|F1SGL8 [details] [associations]
symbol:DCAF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:CT961055 RefSeq:XP_001928394.1 UniGene:Ssc.26086
ProteinModelPortal:F1SGL8 Ensembl:ENSSSCT00000002247
GeneID:100157270 KEGG:ssc:100157270 Uniprot:F1SGL8
Length = 546
Score = 117 (46.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACI-DV 419
Y HGV I+C FS G++ + SG S G + Y+ S + +K+ +++ AC+ DV
Sbjct: 431 YRGHGVLHTLIRCRFSPTYSTGQQYIYSGCSTGKVVVYDLLSGHIVKKLTSHK-ACVRDV 489
Query: 420 AFHPILPNIIGSCSWNGDVSVYE 442
++HP I+ S SW+G++ +++
Sbjct: 490 SWHPFEEKIVSS-SWDGNLRLWQ 511
Score = 77 (32.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 35/121 (28%), Positives = 50/121 (41%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSR-DQKLARVLN--FHSAAVNDVKWSQQGL 203
+V + ++P H L S+ D I I N++ D A L AV + S G
Sbjct: 220 SVLDVAFTPDGNHFLYSSWSDY-IHICNIYGEGDTHTALDLRPVERRFAVFSIAVSSDGR 278
Query: 204 FVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL D + D E+ T Q E V V F +S + SGG + ++WD R
Sbjct: 279 EVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADMSSQILFSGGDDAICKVWDRR 338
Query: 263 T 263
T
Sbjct: 339 T 339
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAHEY----IQSLG-PILDVEFTINGKQF 289
+ ++ +F+S ++R++D R G+ H++ + +G +LDV FT +G F
Sbjct: 180 YSKDGQIFMSACQDQVIRMYDCRYGRF-HKFKSIKARDVGWSVLDVAFTPDGNHF 233
Score = 57 (25.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSR------DQKLARVLNFHSAAVNDVK 197
H VN++ ++ + +L S G D +IC VW R D K L H + +
Sbjct: 306 HEDDVNAVAFADMSSQILFSGG-DDAIC--KVWDRRTMREDDPKPVGALAGHQDGITFID 362
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
+++S D + +L D+ +
Sbjct: 363 SKGDARYLISNSKDQTIKLWDIRR 386
>UNIPROTKB|Q5E9I8 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 EMBL:BT020932 IPI:IPI00710208
RefSeq:NP_001014954.1 UniGene:Bt.20137 ProteinModelPortal:Q5E9I8
STRING:Q5E9I8 GeneID:539433 KEGG:bta:539433 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 InParanoid:Q5E9I8 KO:K11801
OrthoDB:EOG44TP7K NextBio:20877986 InterPro:IPR017399
PIRSF:PIRSF038135 Uniprot:Q5E9I8
Length = 546
Score = 116 (45.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACI-DV 419
Y HGV I+C FS G++ + SG S G + Y+ S + +K+ ++ AC+ DV
Sbjct: 431 YRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHVVKKLTTHK-ACVRDV 489
Query: 420 AFHPILPNIIGSCSWNGDVSVYE 442
++HP I+ S SW+G++ +++
Sbjct: 490 SWHPFEEKIVSS-SWDGNLRLWQ 511
Score = 78 (32.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 35/121 (28%), Positives = 51/121 (42%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSR-DQKLARVL--NFHSAAVNDVKWSQQGL 203
+V + ++P H L S+ D I I N++ D A L + AV + S G
Sbjct: 220 SVLDVAFTPDGNHFLYSSWSDY-IHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGR 278
Query: 204 FVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL D + D E+ T Q E V V F +S + SGG + ++WD R
Sbjct: 279 EVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADVSSQILFSGGDDAICKVWDRR 338
Query: 263 T 263
T
Sbjct: 339 T 339
Score = 58 (25.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSR------DQKLARVLNFHSAAVNDVK 197
H VN++ ++ + +L S G D +IC VW R D K L H + +
Sbjct: 306 HEDDVNAVAFADVSSQILFSGG-DDAIC--KVWDRRTMREDDPKPVGALAGHQDGITFID 362
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
+++S D + +L D+ +
Sbjct: 363 SKGDARYLISNSKDQTIKLWDIRR 386
Score = 55 (24.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAH-EYIQS--LG-PILDVEFTINGKQF 289
+ ++ +F+S +RL+D R G+ + I++ +G +LDV FT +G F
Sbjct: 180 YSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHF 233
Score = 45 (20.9 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 125 KSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLAR 184
+S V +P L + KA I +S + SA DQ+I ++ D + R
Sbjct: 153 RSRVMSHFLPNDLGFTDTYSQKAFCGI-YSKD-GQIFMSACQDQTIRLY-----DCRYGR 205
Query: 185 VLNFHSAAVNDVKWS 199
F S DV WS
Sbjct: 206 FRKFKSIKARDVGWS 220
Score = 37 (18.1 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 247 FLSGGSKG-LLRLWDIR 262
+L SK ++LWDIR
Sbjct: 369 YLISNSKDQTIKLWDIR 385
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQ----KLARVLNFHSAAVND 195
+L H V SI SP + + S+ D+++ +W + D K R L HS V D
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKG 254
V S G F LS +D + RL D+ KG+ T+ F+ V V F +N + +SG
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQI-ISGSRDA 134
Query: 255 LLRLWD 260
+++W+
Sbjct: 135 TIKVWN 140
>UNIPROTKB|F5H390 [details] [associations]
symbol:CORO1B "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 EMBL:AP003419 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2253
IPI:IPI00867659 ProteinModelPortal:F5H390 SMR:F5H390
Ensembl:ENST00000537042 ArrayExpress:F5H390 Bgee:F5H390
Uniprot:F5H390
Length = 282
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V I W PT ++L SAG D + IWNV + ++ L R+ + H + +V W+ G
Sbjct: 131 HTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNHNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCSACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 248
Query: 258 LWD 260
LWD
Sbjct: 249 LWD 251
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 148 (57.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ V ++SP +LL+S+ D ++ +W++ Q ++ + H+ V D ++S
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSE-DGTVRLWSL----QTFTCLVGYKGHNYPVWDTQFSPY 597
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
G + +S G+D +RL + + F LA V +FHP NSN +G + +RLWD
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWD 656
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GPI + F+ NG+
Sbjct: 657 VLNGNCVRIFTGHKGPIHSLTFSPNGR 683
Score = 47 (21.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 31/122 (25%), Positives = 51/122 (41%)
Query: 12 SDDEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLHRPNQQHSGLRTEASVAGRY 71
++++ E A K EPE PP T + PN + AS AG
Sbjct: 5 AEEQTEVAVKLEPEGPPTLLPPQAGDGTGEGGGGTTNNG---PNGGGGNVAAAASSAGGD 61
Query: 72 MSKRERALLGPGI-PAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRR 130
+ ++ + PA P P AAA G+ D RQ +L++L+ L +S++R
Sbjct: 62 GGTPKPSVAVSAVAPAGAAPVP------AAAPEAGAPHD---RQTLLAVLQFLRQSNLRE 112
Query: 131 SK 132
++
Sbjct: 113 AE 114
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 87 ATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRH 122
A + +PD SAV++A G D + ++ S L+H
Sbjct: 192 AVEDQPDVSAVLSAYNQQG---DPTMYEEYYSGLKH 224
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 13/50 (26%), Positives = 18/50 (36%)
Query: 57 QHSGLRTEASVAGRYMSKRERALLGPGIPAATDPKPDPSAVVAAAQVLGS 106
+ S LR R E A+ G G P D +A ++V S
Sbjct: 106 RQSNLREAEEALRREARLLEEAVAGTGAPGEADGAGTEAASALLSRVTAS 155
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 143 (55.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H K +N++ P + + SA D I +W+ + D +++ H A V D+ + G
Sbjct: 250 HNKKINAVVLHPDNITAI-SASADSHIRVWS--ATDSSSKAIIDVHQAPVTDISLNASGD 306
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREE----LAVRVVKFHPENSNLFLSGGSKGLLRLW 259
++LS D D+ G E +AV ++FHP+ +F +G + ++++W
Sbjct: 307 YILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGL-IFGTGAADAVVKIW 365
Query: 260 DIRTGKVAHEYIQSLGPILDVEFTING 286
D++ VA + + + F+ NG
Sbjct: 366 DLKNQTVAAAFPGHTAAVRSIAFSENG 392
Score = 46 (21.3 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCR 401
+FS +G L +GS DG + ++ R
Sbjct: 387 AFSENGYYLATGSEDGEVKLWDLR 410
>UNIPROTKB|F1RFA8 [details] [associations]
symbol:MLST8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0050731
GO:GO:0030838 GO:GO:0032314 GO:GO:0032008
GeneTree:ENSGT00390000014795 OMA:NNKGNCY EMBL:FP102909
EMBL:FP102350 Ensembl:ENSSSCT00000008815 Uniprot:F1RFA8
Length = 330
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 62/291 (21%), Positives = 130/291 (44%)
Query: 148 VNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQQGLFV 205
VN++ +P + ++A+AG Q I ++++ S + ++++ N V + + G ++
Sbjct: 49 VNALEITPDRS-MIAAAGY-QHIRMYDLNSNNPN--PIISYDGVNKNIASVGFHEDGRWM 104
Query: 206 LSCGYDCSSRLVDVE-KGIETQS-FREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
+ G DC++R+ D+ + ++ Q F+ + V HP + L + G G + +WD++T
Sbjct: 105 YTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV-GDQSGAIHIWDLKT 163
Query: 264 GKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVW--------DVSREVP 315
++ + L P + E +I VW +V++ +P
Sbjct: 164 -----DHNEQLIP--EPEVSITSAHIDPDASYMAAVNSTGNCFVWNLTGGIGDEVTQLIP 216
Query: 316 LSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRL--DKFKRYESHGVS-- 371
+K Y C R P D +A + + T F L + + + G S
Sbjct: 217 KTKIPAHTRYALQC-RFSP-DSTLLATCSADQTCKIWRTSNFSLMTELSIKSSNPGESSR 274
Query: 372 GFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
G+ C+FS D + +V+ SSD + + E++R+ +++A + +AF+
Sbjct: 275 GWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAVVCLAFN 325
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 158 (60.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L L H + V S+ +S + LLASA D ++ IW+ + L R+L H+ +V V
Sbjct: 297 LQNTLEGHNEWVKSVVFSHD-SRLLASASDDGTVKIWD--TATGTLQRMLKGHNDSVRSV 353
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFRE-ELAVRVVKFHPENSNLFLSGGSKGL 255
+S + S D + R+ + G+ +F + E +V V F ++ L S G
Sbjct: 354 VFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRL-ASASDGGN 412
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDV-EFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREV 314
+++WD RTG SL +L+ + +N F + +W +
Sbjct: 413 VKIWDTRTG--------SLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG- 463
Query: 315 PLSKQVYVEAYTCPCVRHHPF--DPYFVAQSNGNY-IAIF-SSTPPFRLDKFKRYESHGV 370
S Q +E + VR F D +A ++ + + I+ ++T P + ESH
Sbjct: 464 --SLQRTLEGHN-DWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQ----NNLESH-- 514
Query: 371 SGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIG 430
+ FS D L S S D ++ ++ + LE ++ ++ V+F P ++
Sbjct: 515 DNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPD-SRLLA 573
Query: 431 SCSWNGDVSVY 441
S S +G V ++
Sbjct: 574 SASDDGTVKIW 584
Score = 137 (53.3 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 65/305 (21%), Positives = 127/305 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H +AV S+++S + LLASA D ++ IW+ + L L H+ V V +S
Sbjct: 262 HDRAVGSVSFSHD-SRLLASASGDGTVKIWD--TATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+ S D + ++ D G + + +VR V F +S L SG + +R+W+
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS-HDSRLIASGSNDRTVRIWETT 377
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
TG + H + ++ V F + ++ + +WD S Q +
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGN-------VKIWDTRTG---SLQNVL 427
Query: 323 EAYTCPCVRHHPFDP---YFVAQSNGNYIAIF-SSTPPFRLDKFKRYESHGVSGFPIKCS 378
E + CV F P + S+ + I+ ++T + + E H + +
Sbjct: 428 EGHD-DCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQ----RTLEGH--NDWVRSVV 480
Query: 379 FSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAF-HPILPNIIGSCSWNGD 437
FS D + S S D ++ ++ + L+ +++++ V F H ++ S S +
Sbjct: 481 FSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHD--SRLLASASDDMT 538
Query: 438 VSVYE 442
V +++
Sbjct: 539 VKIWD 543
Score = 44 (20.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 98 VAAAQVLGSISDAYLRQDILSL 119
+A +VL +S+ LR+DIL L
Sbjct: 40 LAELRVLSGLSEDILRRDILPL 61
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 82 PGIPAATD----PKPDPSAVV--AAAQVLGSISDAY 111
PG+ D P+PDP A V + A + D Y
Sbjct: 125 PGVSVDGDMFLLPEPDPLAAVRYSCAYWINHFCDIY 160
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 142 (55.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 70/309 (22%), Positives = 121/309 (39%)
Query: 144 HTKAVNSINWSPTH---AHLLASAGMDQSICIWNVWSRDQKLAR--VLNFHSAAVNDVKW 198
H A+ + W + + + + +D + +W WS D+KL L H V V
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWK-WS-DEKLELQWTLEGHQLGVVSVNI 72
Query: 199 SQQGLFVLSCGYDCSSRLVDVEKGIETQSFRE-ELAVRVVKFHPENSNLFLSGGSKGLLR 257
SQ G S D RL D+E G + +S + V F P+ S +G G +
Sbjct: 73 SQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPD-SKYIATGSHLGKVN 131
Query: 258 LWDIRTGKVAHEYIQSLGP-ILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPL 316
++ + +GK H + + G IL + ++ +GK I ++D++ L
Sbjct: 132 IFGVESGKKEHS-LDTRGKFILSIAYSPDGKYLASGAIDGI-------INIFDIATGKLL 183
Query: 317 SKQVYVEAYTCPCVRHHPFDP---YFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGF 373
+E + P +R F P V S+ YI I+ + HG +
Sbjct: 184 HT---LEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYDVQ---HANLAGTLSGHG--SW 234
Query: 374 PIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
+ +FS D VS SSD SI ++ S ++ V ++P I+ S
Sbjct: 235 VLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIV-SAG 293
Query: 434 WNGDVSVYE 442
+ + +Y+
Sbjct: 294 DDRAIHIYD 302
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 56/261 (21%), Positives = 113/261 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN--DVKWSQQ 201
H V S+N S A + AS+ +D I +W++ + Q + + + V+ V +S
Sbjct: 63 HQLGVVSVNISQNGA-IAASSSLDAHIRLWDLETGKQ----IKSMDAGPVDAWTVAFSPD 117
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSF--REELAVRVVKFHPENSNLFLSGGSKGLLRLW 259
++ + + + VE G + S R + + + + P+ L SG G++ ++
Sbjct: 118 SKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIA-YSPDGKYL-ASGAIDGIINIF 175
Query: 260 DIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQ 319
DI TGK+ H PI + F+ + + I ++DV + L+
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-------IKIYDV-QHANLAGT 227
Query: 320 VYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
+ V P D +FV+ S+ I ++ ++ ++ F ++ H + +K +
Sbjct: 228 LSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF--FD-HQDQVWSVK--Y 282
Query: 380 SLDGEKLVSGSSDGSIYFYNC 400
+ G K+VS D +I+ Y+C
Sbjct: 283 NPTGSKIVSAGDDRAIHIYDC 303
>UNIPROTKB|Q8TEB1 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 EMBL:CH471078 EMBL:AL136295 GO:GO:0080008 CTD:80344
HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:AF267858 EMBL:AK027223 EMBL:AK057636
EMBL:AK074296 EMBL:BX161405 EMBL:BX247970 EMBL:BC008858
EMBL:BC067132 EMBL:AF130070 EMBL:AL833831 IPI:IPI00178972
IPI:IPI00328589 IPI:IPI00328631 RefSeq:NP_001156956.1
RefSeq:NP_079506.3 RefSeq:NP_852002.1 UniGene:Hs.525251
ProteinModelPortal:Q8TEB1 SMR:Q8TEB1 IntAct:Q8TEB1 STRING:Q8TEB1
PhosphoSite:Q8TEB1 DMDM:37538034 PaxDb:Q8TEB1 PRIDE:Q8TEB1
Ensembl:ENST00000396936 Ensembl:ENST00000396941
Ensembl:ENST00000446197 Ensembl:ENST00000559115 GeneID:80344
KEGG:hsa:80344 UCSC:uc001wlv.3 UCSC:uc001wlz.3 UCSC:uc001wmb.4
GeneCards:GC14P024583 HGNC:HGNC:20258 HPA:HPA031157 MIM:613317
neXtProt:NX_Q8TEB1 PharmGKB:PA165478701 InParanoid:Q8TEB1
OMA:RMLHQRE PhylomeDB:Q8TEB1 GenomeRNAi:80344 NextBio:70930
Bgee:Q8TEB1 CleanEx:HS_WDR23 Genevestigator:Q8TEB1
GermOnline:ENSG00000100897 Uniprot:Q8TEB1
Length = 546
Score = 115 (45.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACI-DV 419
Y HGV I+C FS G++ + SG S G + Y+ S + +K+ ++ AC+ DV
Sbjct: 431 YRGHGVLHTLIRCRFSPIHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK-ACVRDV 489
Query: 420 AFHPILPNIIGSCSWNGDVSVYE 442
++HP I+ S SW+G++ +++
Sbjct: 490 SWHPFEEKIVSS-SWDGNLRLWQ 511
Score = 77 (32.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 35/121 (28%), Positives = 51/121 (42%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSR-DQKLARVL--NFHSAAVNDVKWSQQGL 203
+V + ++P H L S+ D I I N++ D A L + AV + S G
Sbjct: 220 SVLDVAFTPDGNHFLYSSWSDY-IHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGR 278
Query: 204 FVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL D + D E+ T Q E V V F +S + SGG + ++WD R
Sbjct: 279 EVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWDRR 338
Query: 263 T 263
T
Sbjct: 339 T 339
Score = 57 (25.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSR------DQKLARVLNFHSAAVNDVK 197
H VN++ ++ + +L S G D +IC VW R D K L H + +
Sbjct: 306 HEDDVNAVAFADISSQILFSGG-DDAIC--KVWDRRTMREDDPKPVGALAGHQDGITFID 362
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
+++S D + +L D+ +
Sbjct: 363 SKGDARYLISNSKDQTIKLWDIRR 386
Score = 55 (24.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAH-EYIQS--LG-PILDVEFTINGKQF 289
+ ++ +F+S +RL+D R G+ + I++ +G +LDV FT +G F
Sbjct: 180 YSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHF 233
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 69/294 (23%), Positives = 117/294 (39%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HT V + P+ ++ AS GMD+ I +WNV+ D K VLN A+ D++WS+
Sbjct: 49 HTAEVLVARFDPSGSYF-ASGGMDRQILLWNVFG-DVKNYGVLNGCKGAITDLQWSRDSR 106
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAV-RVVKFHPENSNLFLSGGSKGLLRLWDIR 262
V D D G + + + V + S L S +++WD R
Sbjct: 107 VVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSR 166
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
+ K + I+ P+ V G Q I +WD+ R S +
Sbjct: 167 S-KDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGA-------IKIWDL-RNNHCSHVLKG 217
Query: 323 EAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDK-FKRYES--HGVSGFPIKCSF 379
+ ++ S N + IF P + + +E HG + ++
Sbjct: 218 HKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAW 277
Query: 380 SLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCS 433
S + + +GSSD ++Y ++ + +L + +E + V FHP +II SCS
Sbjct: 278 SRNSRFVGAGSSDKNVYVWSA-TGDLRYVLPGHEGSVNHVDFHPH-QDIILSCS 329
>MGI|MGI:90168 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:90168 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:AK033540 EMBL:AK152395 EMBL:BC008545 EMBL:BC037001
IPI:IPI00127271 IPI:IPI00378419 RefSeq:NP_001185938.1
RefSeq:NP_598495.1 UniGene:Mm.11535 UniGene:Mm.488383
ProteinModelPortal:Q91VU6 SMR:Q91VU6 STRING:Q91VU6
PhosphoSite:Q91VU6 PaxDb:Q91VU6 PRIDE:Q91VU6 DNASU:28199
Ensembl:ENSMUST00000072530 Ensembl:ENSMUST00000117236
Ensembl:ENSMUST00000121622 GeneID:28199 KEGG:mmu:28199
UCSC:uc007tyz.2 InParanoid:Q91VU6 ChiTaRS:DCAF11 NextBio:306796
Bgee:Q91VU6 CleanEx:MM_WDR23 Genevestigator:Q91VU6
GermOnline:ENSMUSG00000022214 Uniprot:Q91VU6
Length = 549
Score = 115 (45.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACI-DV 419
Y HGV I+C FS G++ + SG S G + Y+ S + +K+ ++ AC+ DV
Sbjct: 431 YRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK-ACVRDV 489
Query: 420 AFHPILPNIIGSCSWNGDVSVYE 442
++HP I+ S SW+G++ +++
Sbjct: 490 SWHPFEEKIVSS-SWDGNLRLWQ 511
Score = 77 (32.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 35/121 (28%), Positives = 51/121 (42%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSR-DQKLARVL--NFHSAAVNDVKWSQQGL 203
+V + ++P H L S+ D I I N++ D A L + AV + S G
Sbjct: 220 SVLDVAFTPDGNHFLYSSWSDY-IHICNIYGEGDTHTALDLRPDERRFAVFSIAVSSDGR 278
Query: 204 FVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL D + D E+ T Q E V V F +S + SGG + ++WD R
Sbjct: 279 EVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWDRR 338
Query: 263 T 263
T
Sbjct: 339 T 339
Score = 60 (26.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAHEY----IQSLG-PILDVEFTINGKQF 289
+ ++ +F+S +RL+D R G+ H++ + +G +LDV FT +G F
Sbjct: 180 YSKDGQIFMSACQDQTIRLYDCRYGRF-HKFKSIKARDVGWSVLDVAFTPDGNHF 233
Score = 57 (25.1 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSR------DQKLARVLNFHSAAVNDVK 197
H VN++ ++ + +L S G D +IC VW R D K L H + +
Sbjct: 306 HEDDVNAVAFADISSQILFSGG-DDAIC--KVWDRRTMREDDPKPVGALAGHQDGITFID 362
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
+++S D + +L D+ +
Sbjct: 363 SKGDARYLISNSKDQTIKLWDIRR 386
Score = 47 (21.6 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 125 KSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLAR 184
+S V +P LS + KA I +S + SA DQ+I ++ D + R
Sbjct: 153 QSRVMSHFLPNDLSFTDTYSQKAFCGI-YSKD-GQIFMSACQDQTIRLY-----DCRYGR 205
Query: 185 VLNFHSAAVNDVKWS 199
F S DV WS
Sbjct: 206 FHKFKSIKARDVGWS 220
Score = 37 (18.1 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 247 FLSGGSKG-LLRLWDIR 262
+L SK ++LWDIR
Sbjct: 369 YLISNSKDQTIKLWDIR 385
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 108 (43.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 153 WSPTHA--HLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGY 210
+S H + LA A + + I+N + + + H AV D+ W +++
Sbjct: 58 FSSAHGQQNCLAVANEEGFVTIFNTGEKQSSVLKEWQAHDNAVFDIAWVPGTNCLVTASG 117
Query: 211 DCSSRLVDVEKGIETQSFR-EELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGK 265
D ++RL DV G +F+ + +++ V F+ + +F +GG G + +WD R K
Sbjct: 118 DQTARLWDVITGDLLGTFKGHQCSLKSVAFYKQEKAVFSTGGRDGNIMIWDTRCSK 173
Score = 86 (35.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 365 YESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRS-SELERKIKAYEQACIDVAFHP 423
+ H S F +K + S D + L SGSSD ++Y + + ++ + Q VA+ P
Sbjct: 306 FSGHSNSSFYVKSTVSPDDQFLASGSSDHNVYIWKISDPKQAPMMLQGHSQEVTSVAWCP 365
Query: 424 ILPNIIGSCSWNGDVSVY 441
I SCS + V ++
Sbjct: 366 TDFTKIASCSDDNTVRIW 383
Score = 65 (27.9 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H AV I W P L+ ++G DQ+ +W+V + D L H ++ V + +Q
Sbjct: 96 HDNAVFDIAWVPGTNCLVTASG-DQTARLWDVITGD--LLGTFKGHQCSLKSVAFYKQEK 152
Query: 204 FVLSCG 209
V S G
Sbjct: 153 AVFSTG 158
Score = 58 (25.5 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 234 VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAH 268
V VV F E + L SG G++++WD+R A+
Sbjct: 214 VTVVLFCDE-TKLISSGAVDGIIKMWDLRRNYTAY 247
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 148 (57.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ V ++SP +LL+S+ D ++ +W++ Q ++ + H+ V D ++S
Sbjct: 302 HSGPVYGASFSPDRNYLLSSSE-DGTVRLWSL----QTFTCLVGYKGHNYPVWDTQFSPY 356
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
G + +S G+D +RL + + F LA V +FHP NSN +G + +RLWD
Sbjct: 357 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWD 415
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GPI + F+ NG+
Sbjct: 416 VLNGNCVRIFTGHKGPIHSLTFSPNGR 442
Score = 41 (19.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 87 ATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRH 122
A + +PD SAV++A G D + ++ S L+H
Sbjct: 3 AVEDQPDVSAVLSAYNQQG---DPTMYEEYYSGLKH 35
>RGD|2382 [details] [associations]
symbol:Coro1b "coronin, actin-binding protein, 1B" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IBA] [GO:0030036 "actin cytoskeleton
organization" evidence=IBA] [GO:0051015 "actin filament binding"
evidence=IBA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:2382 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953
Pfam:PF08954 CTD:57175 KO:K13886 EMBL:AJ006064 IPI:IPI00209397
RefSeq:NP_062095.1 UniGene:Rn.2819 ProteinModelPortal:O89046
SMR:O89046 IntAct:O89046 MINT:MINT-2982709 STRING:O89046
PhosphoSite:O89046 PRIDE:O89046 GeneID:29474 KEGG:rno:29474
UCSC:RGD:2382 InParanoid:O89046 NextBio:609304 Genevestigator:O89046
GermOnline:ENSRNOG00000021828 Uniprot:O89046
Length = 484
Score = 145 (56.1 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V I W PT ++L SAG D + IWNV + ++ L R+ + H + +V W+ G
Sbjct: 131 HTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNHNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCTACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTAGFSRMSERQLA 248
Query: 258 LWD 260
LWD
Sbjct: 249 LWD 251
>UNIPROTKB|G3V940 [details] [associations]
symbol:Coro1b "Coronin" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:2382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
OMA:QGERICR UniGene:Rn.2819 EMBL:CH473953 ProteinModelPortal:G3V940
Ensembl:ENSRNOT00000029829 Uniprot:G3V940
Length = 484
Score = 145 (56.1 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V I W PT ++L SAG D + IWNV + ++ L R+ + H + +V W+ G
Sbjct: 131 HTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNHNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCTACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 248
Query: 258 LWD 260
LWD
Sbjct: 249 LWD 251
>UNIPROTKB|H7BWW0 [details] [associations]
symbol:CORO1B "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886 OMA:QGERICR
EMBL:DAAA02063620 EMBL:DAAA02063621 RefSeq:NP_001106714.1
UniGene:Bt.49709 ProteinModelPortal:H7BWW0 PRIDE:H7BWW0
Ensembl:ENSBTAT00000029972 GeneID:510128 KEGG:bta:510128
Uniprot:H7BWW0
Length = 488
Score = 145 (56.1 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V + W PT ++L SAG D + IWNV + ++ L R+ + H + +V W++ G
Sbjct: 130 HTKRVGIVTWHPTARNVLLSAGCDNMVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNRNGS 188
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 189 LFCTACK-DKSVRVIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 247
Query: 258 LWD 260
LWD
Sbjct: 248 LWD 250
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 133 IPGRLST-ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSA 191
+P ST L H AV + + P L AS D +I IW+ W + + R L H
Sbjct: 101 LPKPSSTHTLTSHRDAVTCVAFHPVFTSL-ASGSEDCTIKIWD-WELGE-IERTLKGHIR 157
Query: 192 AVNDVKWS-QQGLFVL-SCGYDCSSRLVDVEK---GIETQSFREELAVRVVKFHPENSNL 246
V+ + + Q+G +L SC D + +L D K I T S + +V V+F N N
Sbjct: 158 GVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDH-SVSSVRFLTSNDNH 216
Query: 247 FLSGGSKGLLRLWDIRTG---KVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXX 303
+S G LR+WD+ TG KV +S I DV + +GK
Sbjct: 217 LISASRDGTLRIWDVSTGFCVKVIKSATESW--IRDVSPSFDGKWLVSGGRDQA------ 268
Query: 304 XIVVWDVSREVPLSKQVYVEAYTCPCV 330
I VW+VS P + + E + CV
Sbjct: 269 -ITVWEVSSAEPKAALLGHENFIECCV 294
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 62/207 (29%), Positives = 89/207 (42%)
Query: 133 IPGRLST-ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSA 191
+P ST L H AV + + P L AS D +I IW+ W + + R L H
Sbjct: 101 LPKPSSTHTLTSHRDAVTCVAFHPVFTSL-ASGSEDCTIKIWD-WELGE-IERTLKGHIR 157
Query: 192 AVNDVKWS-QQGLFVL-SCGYDCSSRLVDVEK---GIETQSFREELAVRVVKFHPENSNL 246
V+ + + Q+G +L SC D + +L D K I T S + +V V+F N N
Sbjct: 158 GVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDH-SVSSVRFLTSNDNH 216
Query: 247 FLSGGSKGLLRLWDIRTG---KVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXX 303
+S G LR+WD+ TG KV +S I DV + +GK
Sbjct: 217 LISASRDGTLRIWDVSTGFCVKVIKSATESW--IRDVSPSFDGKWLVSGGRDQA------ 268
Query: 304 XIVVWDVSREVPLSKQVYVEAYTCPCV 330
I VW+VS P + + E + CV
Sbjct: 269 -ITVWEVSSAEPKAALLGHENFIECCV 294
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 144 (55.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVL--NFHSAAVNDVKW 198
L H+++V + WSP +LAS +D++I IW+ + QK + + H + VN + W
Sbjct: 265 LAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISW 324
Query: 199 SQQGLFVLSCGYDCSSRLVDV-----EKGIETQSFREELAVRVVKFHPENSNLFLSGGSK 253
++ F+ S G D + D+ +K I T + + V++ P + + SGG
Sbjct: 325 NRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTD-HITTVEWSPAEATVLASGGDD 383
Query: 254 GLLRLWDIRTGK 265
+ LWD+ K
Sbjct: 384 DQIALWDLAVEK 395
Score = 125 (49.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 39/130 (30%), Positives = 59/130 (45%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWN-----VWSRDQKLARVLNFHSAAVNDVKW 198
H + +I+WSP+ +LA+ + I +W W DQ R L HS +V D++W
Sbjct: 221 HQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQ---RPLAGHSQSVEDLQW 277
Query: 199 SQQGLFVL-SCGYDCSSRLVDVEKGIE-----TQSFREELAVRVVKFHPENSNLFLSGGS 252
S VL SC D + R+ D + T + V V+ ++ N SGG
Sbjct: 278 SPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN-RNEPFIASGGD 336
Query: 253 KGLLRLWDIR 262
G L +WD+R
Sbjct: 337 DGYLHIWDLR 346
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 122 (48.0 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 137 LSTALCHHTKAVNSINWSPTHA------HLLASAGMDQSICIWNVWSRDQKLARVLNFHS 190
+ AL HTK + ++ W P H +LLAS D ++ IWNV R L L+ H+
Sbjct: 212 IGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRT--LLFTLSGHT 269
Query: 191 AAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKG 222
A + V+W Q ++ S YD + R+ D + G
Sbjct: 270 APITCVRWGGQN-WIYSSSYDKTIRIWDAKDG 300
Score = 67 (28.6 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 305 IVVWDVSREV-PLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRL--DK 361
+++WD + P++K + + V H F P +G IA S RL K
Sbjct: 370 LILWDPQKSTKPITK---MHGHQ-KVVNHASFSP------DGRCIATASFDSSVRLWDGK 419
Query: 362 FKRYES--HGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDV 419
++ + G +C++S D LVS S D ++ ++ RS +++ + +E V
Sbjct: 420 TGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAV 479
Query: 420 AFHP 423
+ P
Sbjct: 480 DWSP 483
Score = 46 (21.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 383 GEKLVSGSSDGSIYFYNC-RSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSVY 441
GE+LVS S D + ++ +S++ K+ +++ +F P I + S++ V ++
Sbjct: 358 GERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPD-GRCIATASFDSSVRLW 416
Query: 442 E 442
+
Sbjct: 417 D 417
Score = 39 (18.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 6/21 (28%), Positives = 15/21 (71%)
Query: 379 FSLDGEKLVSGSSDGSIYFYN 399
+S DG+++ SG +D ++ ++
Sbjct: 481 WSPDGQRVASGGADKAVRIWS 501
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 136 (52.9 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 47/148 (31%), Positives = 69/148 (46%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
A+ H KA S++ + LAS D S+ +W++ S D+ +A + HS V V W
Sbjct: 277 AIVFHPKATVSLDKKDVN---LASCAADGSVKLWSLES-DEPVADIEG-HSMRVARVMWH 331
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G F+ + YD S RL D+E E V + FH + S L +GG R+
Sbjct: 332 PSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGS-LAGTGGLDAFGRV 390
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTING 286
WD+RTG+ L I + F+ NG
Sbjct: 391 WDLRTGRCIMFLEGHLKEIYGLNFSPNG 418
Score = 52 (23.4 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS +G + +GS D + ++ R + I A++ V F P N + + +++
Sbjct: 413 NFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNT 472
Query: 438 VSVY 441
++
Sbjct: 473 AKIW 476
Score = 38 (18.4 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 13 DDEPEPASKHEPELRSIFSPPSK 35
DD+ SK E + +FS P +
Sbjct: 150 DDDRSKKSKEEVMISCLFSVPGE 172
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 141 (54.7 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 144 HTKAVNSINWSPTHAHL--LASAGMDQSICIWNVWSRDQK-----LARVLNFHSAAVNDV 196
H+ V S++ +PT L + SA D+ + +WN+ + D + L HS A+NDV
Sbjct: 20 HSDWVTSVS-TPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGL 255
S GLF LS +D S RL D+ G +SF + V V F P+N + + K
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDK-T 137
Query: 256 LRLWD 260
++LW+
Sbjct: 138 IKLWN 142
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 45/178 (25%), Positives = 82/178 (46%)
Query: 106 SISDAYLRQDILSLLRHLPKSHVRRSKIP-GRLSTALCHHTKAVNSINWSPTHAHLLASA 164
+I+D + D L L VR + G + HT V S+++SP + ++ SA
Sbjct: 74 AINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIV-SA 132
Query: 165 GMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG--LFVLSCGYDCSSRLVDVEKG 222
D++I +WN ++ K H+ + V++S ++SCG+D ++ +++
Sbjct: 133 SRDKTIKLWNTLAQC-KYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 223 IETQSFREELAV-RVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILD 279
++ V V P+ S L SGG G+ +LWD++ GK H Y G ++
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGS-LCASGGKDGVAKLWDVKEGK--HLYSLETGSTIN 246
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 141 (54.7 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 144 HTKAVNSINWSPTHAHL--LASAGMDQSICIWNVWSRDQK-----LARVLNFHSAAVNDV 196
H+ V S++ +PT L + SA D+ + +WN+ + D + L HS A+NDV
Sbjct: 20 HSDWVTSVS-TPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGL 255
S GLF LS +D S RL D+ G +SF + V V F P+N + + K
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDK-T 137
Query: 256 LRLWD 260
++LW+
Sbjct: 138 IKLWN 142
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 45/178 (25%), Positives = 82/178 (46%)
Query: 106 SISDAYLRQDILSLLRHLPKSHVRRSKIP-GRLSTALCHHTKAVNSINWSPTHAHLLASA 164
+I+D + D L L VR + G + HT V S+++SP + ++ SA
Sbjct: 74 AINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIV-SA 132
Query: 165 GMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG--LFVLSCGYDCSSRLVDVEKG 222
D++I +WN ++ K H+ + V++S ++SCG+D ++ +++
Sbjct: 133 SRDKTIKLWNTLAQC-KYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 223 IETQSFREELAV-RVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILD 279
++ V V P+ S L SGG G+ +LWD++ GK H Y G ++
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGS-LCASGGKDGVAKLWDVKEGK--HLYSLETGSTIN 246
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 147 (56.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 105 GSISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASA 164
G+ A + QD + L +S R+ L A H K VN + ++P + L+A+A
Sbjct: 438 GATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNK-LIATA 496
Query: 165 GMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIE 224
D++ +W + L VL H+ V V++S VL+ DC+ R+ +
Sbjct: 497 SQDKTAKVW--LAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSC 554
Query: 225 TQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRT 263
+ F +E + +F ++ +S S GLL+LW+I+T
Sbjct: 555 IKRFDQECTILRAEFL-DHGKFIISAASDGLLKLWNIKT 592
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 114 (45.2 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 52/194 (26%), Positives = 84/194 (43%)
Query: 93 DPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSIN 152
DP++ + A G D +R + ++RH H R S PG + H
Sbjct: 26 DPTSTLLAT---GGC-DGAVR--VWDIVRHYGTHHFRGS--PGVVHLVAFHP-------- 69
Query: 153 WSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDC 212
PT LL S+ D +I +W++ +D+ VL H +AV + +S G +LS G D
Sbjct: 70 -DPTRL-LLFSSATDAAIRVWSL--QDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK 125
Query: 213 SSRLVDVEKGIETQSFREELAVRVVKFHPEN--SNL--------FLSGGSKGLLRLWDIR 262
+ D++ T++ +V PE S L FL+ G +G LR+W+
Sbjct: 126 ICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAA 185
Query: 263 TGKVAHEYIQSLGP 276
+G+ + Q GP
Sbjct: 186 SGQCVYTQAQPPGP 199
Score = 79 (32.9 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 329 CVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVS 388
CV+ P D S I +++ F K +E H S +K +F G +L+S
Sbjct: 415 CVQFSPMDQVLATASADGTIKLWA-LQDFSC--LKTFEGHDAS--VLKVAFVSRGTQLLS 469
Query: 389 GSSDGSIYFYNCRSSELERKIKAYE 413
SDG + + +++E R + A+E
Sbjct: 470 SGSDGLVKLWTIKNNECVRTLDAHE 494
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 110 (43.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 42/172 (24%), Positives = 75/172 (43%)
Query: 123 LPKSHV-RRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQ- 180
L K H R +IP L H V + +S + +L A+A D + IW V ++
Sbjct: 201 LYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSNSGKYL-ATASSDCTAIIWKVLDDNKV 259
Query: 181 KLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREE---LAVRVV 237
+L L H V+ V WS +L+CG +L DV+ G+ +F V
Sbjct: 260 ELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSC 319
Query: 238 KFHPENSNLFL--SGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
+ P+++ L S +G++ +WD ++ + ++D+ T +G+
Sbjct: 320 AWFPDSTRLVCGSSDPERGIV-MWDTDGNEIKAWRGTRIPKVVDLAVTPDGE 370
Score = 80 (33.2 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 17/79 (21%), Positives = 39/79 (49%)
Query: 364 RYESHGVSGFPIKCSFS-LDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
++ H S + I+ F LD + SGS D +Y +N ++++ + + V+++
Sbjct: 435 KFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWN 494
Query: 423 PILPNIIGSCSWNGDVSVY 441
P P ++ S S + + ++
Sbjct: 495 PKNPRMLASASDDQTIRIW 513
>MGI|MGI:1345963 [details] [associations]
symbol:Coro1b "coronin, actin binding protein 1B"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1345963 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
eggNOG:COG2319 GO:GO:0051015 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886
OMA:QGERICR EMBL:AF143956 EMBL:AK008947 EMBL:AK149639
IPI:IPI00124819 RefSeq:NP_035908.1 UniGene:Mm.276859
ProteinModelPortal:Q9WUM3 SMR:Q9WUM3 IntAct:Q9WUM3 STRING:Q9WUM3
PhosphoSite:Q9WUM3 PaxDb:Q9WUM3 PRIDE:Q9WUM3
Ensembl:ENSMUST00000008893 GeneID:23789 KEGG:mmu:23789
InParanoid:Q9WUM3 ChiTaRS:CORO1B NextBio:303387 Bgee:Q9WUM3
CleanEx:MM_CORO1B Genevestigator:Q9WUM3
GermOnline:ENSMUSG00000024835 Uniprot:Q9WUM3
Length = 484
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V I W PT ++L SAG D + IWNV + ++ L R+ + H + +V W+ G
Sbjct: 131 HTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNHNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCSACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 248
Query: 258 LWD 260
LWD
Sbjct: 249 LWD 251
>UNIPROTKB|E2R7N5 [details] [associations]
symbol:PPP1CA "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:57175 KO:K13886
EMBL:AAEX03011616 EMBL:AAEX03011614 EMBL:AAEX03011615
RefSeq:XP_533215.2 ProteinModelPortal:E2R7N5
Ensembl:ENSCAFT00000018367 GeneID:476007 KEGG:cfa:476007
NextBio:20851738 Uniprot:E2R7N5
Length = 489
Score = 144 (55.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V + W PT ++L SAG D + IWNV + ++ L R+ + H + +V W++ G
Sbjct: 131 HTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNRNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCSACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 248
Query: 258 LWD 260
LWD
Sbjct: 249 LWD 251
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 145 (56.1 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L HT V S+ + T L+ + SI +W++ + K+ R L H A + + +
Sbjct: 58 SLTGHTSPVESVRLN-TPEELIVAGSQSGSIRVWDLEAA--KILRTLMGHKANICSLDFH 114
Query: 200 QQGLFVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G FV S D + +L D+ KG + AVR ++F P+ L S ++L
Sbjct: 115 PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKL 173
Query: 259 WDIRTGKVAHEYIQSLGPILDVEFTIN 285
WD+ GK+ E+ GP+ VEF N
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Score = 129 (50.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 40/143 (27%), Positives = 66/143 (46%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
++ L H + S+++ P + +AS D +I +W++ R + R HS AV
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDI-RRKGCVFRYRG-HSQAVRC 152
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKG 254
+++S G ++ S D + +L D+ G F V VV+FHP N L SG S
Sbjct: 153 LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDR 211
Query: 255 LLRLWDIRTGKVAHEYIQSLGPI 277
+R WD+ +V GP+
Sbjct: 212 TIRFWDLEKFQVVSCIEGEPGPV 234
>UNIPROTKB|F1RUX1 [details] [associations]
symbol:CORO1B "Coronin" species:9823 "Sus scrofa"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
OMA:QGERICR EMBL:CU633429 Ensembl:ENSSSCT00000014123 Uniprot:F1RUX1
Length = 498
Score = 144 (55.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V I W PT ++L SAG D + IWNV + ++ L R+ + H + ++ W++ G
Sbjct: 130 HTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNISWNRNGS 188
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 189 LFCSACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 247
Query: 258 LWD 260
LWD
Sbjct: 248 LWD 250
>UNIPROTKB|F1Q473 [details] [associations]
symbol:PPP1CA "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 EMBL:AAEX03011616
EMBL:AAEX03011614 EMBL:AAEX03011615 Ensembl:ENSCAFT00000039783
Uniprot:F1Q473
Length = 501
Score = 144 (55.7 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V + W PT ++L SAG D + IWNV + ++ L R+ + H + +V W++ G
Sbjct: 131 HTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNRNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCSACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 248
Query: 258 LWD 260
LWD
Sbjct: 249 LWD 251
>RGD|727965 [details] [associations]
symbol:Wdr44 "WD repeat domain 44" species:10116 "Rattus
norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005874 "microtubule" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=IDA] [GO:0030334 "regulation of cell
migration" evidence=IMP] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:727965 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 GO:GO:0030334
GO:GO:0005874 GO:GO:0017137 HSSP:P38262 HOGENOM:HOG000267152
HOVERGEN:HBG080376 OrthoDB:EOG4K6G3H EMBL:AF130121 IPI:IPI01016390
UniGene:Rn.79380 ProteinModelPortal:Q9R037 STRING:Q9R037
PhosphoSite:Q9R037 PRIDE:Q9R037 UCSC:RGD:727965 ArrayExpress:Q9R037
Genevestigator:Q9R037 GermOnline:ENSRNOG00000029068 Uniprot:Q9R037
Length = 908
Score = 120 (47.3 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 46/144 (31%), Positives = 63/144 (43%)
Query: 154 SPTHAHLLAS-AGMDQSICIWNVWSRDQKLA--RVLNF-----HSAAVNDVKWSQQGLFV 205
SP+ L +S + D +C D K A R F H+A + D+ WS+ F+
Sbjct: 558 SPSQESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKN-YFL 616
Query: 206 LSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGK 265
LS D + RL + + F+ V + FHP + FLSG G LRLW+I K
Sbjct: 617 LSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKK 676
Query: 266 VA--HEYIQSLGPILDVEFTINGK 287
VA +E I F NGK
Sbjct: 677 VALWNEVDGQTKLITAANFCQNGK 700
Score = 64 (27.6 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 364 RYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYN 399
+Y+ + S IK SFS D LVSGS D +Y ++
Sbjct: 774 KYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWS 809
Score = 52 (23.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 14 DEPEPAS--KH---EPEL-RSIFSPPSKRPRPDYPYPQTKPHPLHRP 54
+E PA +H EP++ S P RP P +P +P P RP
Sbjct: 199 EEVAPAKPPRHLTPEPDIVASTKKPVPARPPPPTNFPPPRPPPPSRP 245
Score = 50 (22.7 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 381 LDGE-KLVSGSSDGSIYFYNCRSSELERKIKAY 412
L GE K++ S+D I Y+ R L K K Y
Sbjct: 746 LPGENKILVTSNDSRIRLYDLRDLSLSMKYKGY 778
>UNIPROTKB|Q9XSC3 [details] [associations]
symbol:WDR44 "WD repeat-containing protein 44" species:9913
"Bos taurus" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 EMBL:AF117897
IPI:IPI00717067 RefSeq:NP_777199.1 UniGene:Bt.216 HSSP:P38262
ProteinModelPortal:Q9XSC3 STRING:Q9XSC3 PRIDE:Q9XSC3 GeneID:286825
KEGG:bta:286825 CTD:54521 HOGENOM:HOG000267152 HOVERGEN:HBG080376
InParanoid:Q9XSC3 OrthoDB:EOG4K6G3H NextBio:20806479 Uniprot:Q9XSC3
Length = 912
Score = 120 (47.3 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 150 SINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCG 209
S+N S + +G D+ N R + + H+A + D+ WS+ F+LS
Sbjct: 567 SLNSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKYKG-HTADLLDLSWSKN-YFLLSSS 624
Query: 210 YDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVA-- 267
D + RL + + F+ V + FHP + FLSG G LRLW+I KVA
Sbjct: 625 MDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVALW 684
Query: 268 HEYIQSLGPILDVEFTINGK 287
+E I F NGK
Sbjct: 685 NEVDGQTKLITAANFCQNGK 704
Score = 65 (27.9 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 364 RYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYN 399
+Y+ + S IK SFS D LVSGS D +Y ++
Sbjct: 778 KYKGYVNSSSQIKASFSHDFNYLVSGSEDKYVYIWS 813
Score = 51 (23.0 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 23 EPEL-RSIFSPPSKRPRPDYPYPQTKPHPLHRP 54
EP++ S P RP P +P +P P RP
Sbjct: 220 EPDIVASTKKPVPARPPPPANFPPPRPPPPSRP 252
Score = 50 (22.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 381 LDGE-KLVSGSSDGSIYFYNCRSSELERKIKAY 412
L GE K++ S+D I Y+ R L K K Y
Sbjct: 750 LPGENKILVTSNDSRIRLYDLRDLSLSMKYKGY 782
>MGI|MGI:1919654 [details] [associations]
symbol:Wdr44 "WD repeat domain 44" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005874 "microtubule" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=ISO] [GO:0030334 "regulation of cell migration"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919654 GO:GO:0005829 GO:GO:0005794
GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008
GO:GO:0030334 GO:GO:0005874 GeneTree:ENSGT00530000063479
HSSP:P38262 CTD:54521 HOGENOM:HOG000267152 HOVERGEN:HBG080376
OrthoDB:EOG4K6G3H EMBL:AK088885 EMBL:AK139877 EMBL:BC068151
EMBL:BC049191 IPI:IPI00308560 IPI:IPI00676517 RefSeq:NP_780389.2
UniGene:Mm.423 ProteinModelPortal:Q6NVE8 SMR:Q6NVE8 STRING:Q6NVE8
PhosphoSite:Q6NVE8 PaxDb:Q6NVE8 PRIDE:Q6NVE8
Ensembl:ENSMUST00000035766 Ensembl:ENSMUST00000101670 GeneID:72404
KEGG:mmu:72404 UCSC:uc009suy.1 InParanoid:Q6NVE8 NextBio:336206
Bgee:Q6NVE8 CleanEx:MM_WDR44 Genevestigator:Q6NVE8
GermOnline:ENSMUSG00000036769 Uniprot:Q6NVE8
Length = 915
Score = 120 (47.3 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 46/144 (31%), Positives = 63/144 (43%)
Query: 154 SPTHAHLLAS-AGMDQSICIWNVWSRDQKLA--RVLNF-----HSAAVNDVKWSQQGLFV 205
SP+ L +S + D +C D K A R F H+A + D+ WS+ F+
Sbjct: 565 SPSQESLSSSKSDTDMGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKN-YFL 623
Query: 206 LSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGK 265
LS D + RL + + F+ V + FHP + FLSG G LRLW+I K
Sbjct: 624 LSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKK 683
Query: 266 VA--HEYIQSLGPILDVEFTINGK 287
VA +E I F NGK
Sbjct: 684 VALWNEVDGQTKLITAANFCQNGK 707
Score = 64 (27.6 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 364 RYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYN 399
+Y+ + S IK SFS D LVSGS D +Y ++
Sbjct: 781 KYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWS 816
Score = 52 (23.4 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 14 DEPEPAS--KH---EPEL-RSIFSPPSKRPRPDYPYPQTKPHPLHRP 54
+E PA +H EP++ S P RP P +P +P P RP
Sbjct: 209 EEVAPAKPPRHLTPEPDIVASTKKPVPARPPPPTNFPPPRPPPPSRP 255
Score = 50 (22.7 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 381 LDGE-KLVSGSSDGSIYFYNCRSSELERKIKAY 412
L GE K++ S+D I Y+ R L K K Y
Sbjct: 753 LPGENKILVTSNDSRIRLYDLRDLSLSMKYKGY 785
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 148 (57.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ V ++SP +LL+S+ D ++ +W++ Q ++ + H+ V D ++S
Sbjct: 540 HSGPVYGASFSPDRNYLLSSSE-DGTVRLWSL----QTFTCLVGYKGHNYPVWDTQFSPY 594
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
G + +S G+D +RL + + F LA V +FHP NSN +G + +RLWD
Sbjct: 595 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWD 653
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GPI + F+ NG+
Sbjct: 654 VLNGNCVRIFTGHKGPIHSLTFSPNGR 680
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 81 GPGIPA-----ATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRH 122
GP P A + +PD SAV++A G D + ++ S L+H
Sbjct: 178 GPAAPGKVASVAVEDQPDVSAVLSAYNQQG---DPTMYEEYYSGLKH 221
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/85 (25%), Positives = 29/85 (34%)
Query: 28 SIFSPPSKRPRPDYPYPQTKPHP---LHRPNQ--QHSGLRTEASVAGRYMSKRERALLGP 82
S +P P P P PH L Q + S LR R E A+ G
Sbjct: 69 SAAAPAGAAPVPAAPAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREARLLEEAVAGS 128
Query: 83 GIPAATDPKPDPSAVVAAAQVLGSI 107
G P D +A ++V S+
Sbjct: 129 GAPGELDGAGAEAASALLSRVTASV 153
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/122 (31%), Positives = 59/122 (48%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L HH V + +SP ++LAS D+++ +W+V R +L R L HS V+ + + +
Sbjct: 303 LGHHNY-VYCLAFSPK-GNILASGSYDEAVFLWDV--RAGRLMRSLPAHSDPVSGIDFCR 358
Query: 201 QGLFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G V+SC D R+ D G + T + AV V F P N L+ +RL
Sbjct: 359 DGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSP-NGRYILAFNLDSCIRL 417
Query: 259 WD 260
WD
Sbjct: 418 WD 419
Score = 61 (26.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 386 LVSGSSDGSIYFYNCRSSELERKIKAYEQAC--IDV 419
+ S S DG I ++ +S E+ +KI A++ C +DV
Sbjct: 489 VASASEDGHIVLWDVKSKEVVQKIAAHDGVCFWVDV 524
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/148 (30%), Positives = 68/148 (45%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L H V S + P + LL S D SI W++ S + + H+ V D+ S
Sbjct: 335 LLGHCGPVYSTRFLPDSSALL-SCSEDTSIRYWDLESFTNTV--LYQGHAYPVWDLDISP 391
Query: 201 QGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLW 259
LF S YD ++RL ++ + + LA V VKFHP NSN +G + +RLW
Sbjct: 392 HSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHP-NSNYLATGSTDKTVRLW 450
Query: 260 DIRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GP+ + F+ NG+
Sbjct: 451 SAQQGNSVRLFTGHCGPVRCLAFSPNGQ 478
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 46/183 (25%), Positives = 79/183 (43%)
Query: 105 GSISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCH-HTKAVNSINWSPTHAHLLAS 163
G + D +LL + +R + +T L H V ++ SP H+ AS
Sbjct: 340 GPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISP-HSLFFAS 398
Query: 164 AGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGI 223
A D + +W+ + R L R+ H A V+ VK+ ++ + D + RL ++G
Sbjct: 399 ASYDHTARLWS-FDRTYPL-RIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 456
Query: 224 ETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEF 282
+ F VR + F P N +S G LL+LWD+ +G + + I V F
Sbjct: 457 SVRLFTGHCGPVRCLAFSP-NGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTF 515
Query: 283 TIN 285
+++
Sbjct: 516 SLD 518
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 109 (43.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 37/126 (29%), Positives = 51/126 (40%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQ-KLARV--LNFHSAAVNDVKWSQ 200
H K V + WSP LA A D S IW S+D+ + V L H+ V V W
Sbjct: 68 HEKTVRRVAWSPC-GRFLAGASFDASTSIWEK-SKDELEFTHVSSLEGHTYEVKSVAWDS 125
Query: 201 QGLFVLSCGYDCSSRLVDVE--KGIETQSFREELA--VRVVKFHPENSNLFLSGGSKGLL 256
G + +C D S + +E E S ++ V +HP N L S +
Sbjct: 126 TGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHP-NEELLASSSYDDTI 184
Query: 257 RLW-DI 261
+ W DI
Sbjct: 185 KFWKDI 190
Score = 92 (37.4 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H + + + W P LLAS+ D +I W D + L H +++ D+ +++ G
Sbjct: 159 HGQDIKCVLWHPNE-ELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGD 217
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENS 244
++SCG D +LV K + ++ E + + KF ENS
Sbjct: 218 KLVSCGED---KLVLFWK-FDKEN---EKWINIFKFKNENS 251
Score = 74 (31.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 361 KFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIK-------AYE 413
KFK S + + I S SL +V+GS+D SI FY S + K K A++
Sbjct: 245 KFKNENSRPI--YSIDWS-SLTNT-IVTGSADDSIIFYEQESDDTPDKYKIILKKKNAHD 300
Query: 414 QACIDVAFHPILPNIIGSCSWNGDVSVYE 442
++P NI+ SC +G + ++E
Sbjct: 301 SDVNCTKWNPKFKNILASCGDDGFIKIWE 329
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 114 (45.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 52/194 (26%), Positives = 84/194 (43%)
Query: 93 DPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRSKIPGRLSTALCHHTKAVNSIN 152
DP++ + A G D +R + ++RH H R S PG + H
Sbjct: 118 DPTSTLLAT---GGC-DGAVR--VWDIVRHYGTHHFRGS--PGVVHLVAFHP-------- 161
Query: 153 WSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDC 212
PT LL S+ D +I +W++ +D+ VL H +AV + +S G +LS G D
Sbjct: 162 -DPTRL-LLFSSATDAAIRVWSL--QDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK 217
Query: 213 SSRLVDVEKGIETQSFREELAVRVVKFHPEN--SNL--------FLSGGSKGLLRLWDIR 262
+ D++ T++ +V PE S L FL+ G +G LR+W+
Sbjct: 218 ICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAA 277
Query: 263 TGKVAHEYIQSLGP 276
+G+ + Q GP
Sbjct: 278 SGQCVYTQAQPPGP 291
Score = 79 (32.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 329 CVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVS 388
CV+ P D S I +++ F K +E H S +K +F G +L+S
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWA-LQDFSC--LKTFEGHDAS--VLKVAFVSRGTQLLS 580
Query: 389 GSSDGSIYFYNCRSSELERKIKAYE 413
SDG + + +++E R + A+E
Sbjct: 581 SGSDGLVKLWTIKNNECVRTLDAHE 605
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 65/262 (24%), Positives = 108/262 (41%)
Query: 144 HTKAVNSINW---SPTHAHLLASAGMDQSICIWNVWSRDQ-KLARVLNFHSAAVNDVKWS 199
H A+ S+ W S + L+ S +D + +W WS ++ +L L H V V S
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWK-WSDERLELQSTLEGHQLGVVSVDVS 73
Query: 200 QQGLFVLSCGYDCSSRLVDVEKGIETQSFRE-ELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G + S D RL D+E G + ++ + V F P++ +L +G G + +
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHL-ATGSHVGKVNI 132
Query: 259 WDIRTGKVAHEY-IQSLGP-ILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPL 316
+ + TGK EY + + G IL + ++ +GK I ++D++ L
Sbjct: 133 FGVETGK--KEYSLDTRGKFILSIAYSPDGKYLASGAIDGI-------INIFDIATGKLL 183
Query: 317 SKQVYVEAYTCPCVRHHPFDP---YFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGF 373
+E + P +R F P V S+ YI I+ HG +
Sbjct: 184 HT---LEGHAMP-IRSLTFSPDSQLLVTASDDGYIKIYEVQ---HASLAATLSGHG--SW 234
Query: 374 PIKCSFSLDGEKLVSGSSDGSI 395
+ +FS D VS SSD S+
Sbjct: 235 VLNVAFSPDDTHFVSSSSDKSV 256
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 57/266 (21%), Positives = 115/266 (43%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L + L H V S++ SP+ +++AS+ +D I +W++ S Q R ++ V
Sbjct: 56 LQSTLEGHQLGVVSVDVSPS-GNIMASSSLDAHIRLWDLESGKQ--IRAIDAGPVDAWSV 112
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSF--REELAVRVVKFHPENSNLFLSGGSKG 254
+S + + + + VE G + S R + + + + P+ L SG G
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIA-YSPDGKYL-ASGAIDG 170
Query: 255 LLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREV 314
++ ++DI TGK+ H PI + F+ + + I +++V +
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-------IKIYEV-QHA 222
Query: 315 PLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFP 374
L+ + V P D +FV+ S+ + ++ + + F ++ V G
Sbjct: 223 SLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQ-VWG-- 279
Query: 375 IKCSFSLDGEKLVSGSSDGSIYFYNC 400
+K ++ +G K+VS + D I+ Y+C
Sbjct: 280 VK--YNKNGSKIVSVADDQEIHVYDC 303
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 152 (58.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 149 NSINWSPT----HAHLLASAGMDQSICIWNVWSRDQK-LARVLNFHSAAVNDVKWSQQGL 203
N W P+ + L+A+A + ++ IWN K + RV HS AVN + W + L
Sbjct: 70 NDCCWHPSLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKL 129
Query: 204 -FVLSCGYDCSSRLVDVEKGIE----TQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
+L+ D + R+ D+ T S + E ++R V+F+P +N F + G ++L
Sbjct: 130 DCILTGSQDNTLRMWDIRDSANASKITFSPKSE-SIRDVQFNPSQANQFAAAFDNGTIQL 188
Query: 259 WDIRTGKVAHEYIQS-LGPILDVEF 282
WDIR +A E I S G +L +++
Sbjct: 189 WDIRKPTIAVEKITSHQGLVLTIDW 213
Score = 147 (56.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 41/180 (22%), Positives = 81/180 (45%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFH--SAAVNDVKWSQQ 201
H++AVN + W P + + D ++ +W++ RD A + F S ++ DV+++
Sbjct: 115 HSRAVNKLAWHPEKLDCILTGSQDNTLRMWDI--RDSANASKITFSPKSESIRDVQFNPS 172
Query: 202 GLFVLSCGYDCSS-RLVDVEK---GIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLR 257
+ +D + +L D+ K +E + + L V + +HPE N+ SGG +R
Sbjct: 173 QANQFAAAFDNGTIQLWDIRKPTIAVEKITSHQGL-VLTIDWHPEEKNIIASGGRDRAIR 231
Query: 258 LWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE-VPL 316
+WD GK + + ++ + +++ K I +WDV + +PL
Sbjct: 232 VWDFSNGKSLNN-VSTISSVSRIKWRPGNKWHIASCSSIVDFQ----IHIWDVKKPYIPL 286
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 421 FHPILPNIIGSCSWNGDV 438
F PI+ +++ +C GDV
Sbjct: 862 FQPIITDMLEACIEKGDV 879
>UNIPROTKB|Q5JSH3 [details] [associations]
symbol:WDR44 "WD repeat-containing protein 44" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 GO:GO:0030334
GO:GO:0005874 HSSP:P38262 CTD:54521 HOVERGEN:HBG080376
OrthoDB:EOG4K6G3H EMBL:AK001978 EMBL:AK092077 EMBL:AK127556
EMBL:AM393332 EMBL:AM393787 EMBL:BX537578 EMBL:BX538087
EMBL:AL391474 EMBL:AL391803 EMBL:AL391830 EMBL:BC028697
IPI:IPI00444371 IPI:IPI00807730 IPI:IPI00872729
RefSeq:NP_001171894.1 RefSeq:NP_001171895.1 RefSeq:NP_061918.3
UniGene:Hs.98510 ProteinModelPortal:Q5JSH3 SMR:Q5JSH3 IntAct:Q5JSH3
STRING:Q5JSH3 PhosphoSite:Q5JSH3 DMDM:74762196 PaxDb:Q5JSH3
PRIDE:Q5JSH3 DNASU:54521 Ensembl:ENST00000254029
Ensembl:ENST00000371825 GeneID:54521 KEGG:hsa:54521 UCSC:uc004eqn.3
UCSC:uc004eqo.3 GeneCards:GC0XP117480 H-InvDB:HIX0017006
HGNC:HGNC:30512 HPA:HPA038084 neXtProt:NX_Q5JSH3
PharmGKB:PA128394668 InParanoid:Q5JSH3 OMA:KTDHTEV PhylomeDB:Q5JSH3
GenomeRNAi:54521 NextBio:56920 ArrayExpress:Q5JSH3 Bgee:Q5JSH3
CleanEx:HS_WDR44 Genevestigator:Q5JSH3 GermOnline:ENSG00000131725
Uniprot:Q5JSH3
Length = 913
Score = 119 (46.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 46/144 (31%), Positives = 63/144 (43%)
Query: 154 SPTHAHLLAS-AGMDQSICIWNVWSRDQKLA--RVLNF-----HSAAVNDVKWSQQGLFV 205
SP+ L +S + D +C D K A R F H+A + D+ WS+ F+
Sbjct: 563 SPSQESLSSSKSDTDTGVCSGTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSKN-YFL 621
Query: 206 LSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGK 265
LS D + RL + + F+ V + FHP + FLSG G LRLW+I K
Sbjct: 622 LSSSMDKTVRLWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKK 681
Query: 266 VA--HEYIQSLGPILDVEFTINGK 287
VA +E I F NGK
Sbjct: 682 VALWNEVDGQTKLITAANFCQNGK 705
Score = 64 (27.6 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 364 RYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYN 399
+Y+ + S IK SFS D LVSGS D +Y ++
Sbjct: 779 KYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWS 814
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 14 DEPEPAS--KH---EPEL-RSIFSPPSKRPRPDYPYPQTKPHPLHRP 54
+E PA +H EP++ S P RP P +P +P P RP
Sbjct: 207 EEVAPAKPPRHLTPEPDIVASTKKPVPARPPPPTNFPPPRPPPPSRP 253
Score = 50 (22.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 381 LDGE-KLVSGSSDGSIYFYNCRSSELERKIKAY 412
L GE K++ S+D I Y+ R L K K Y
Sbjct: 751 LPGENKILVTSNDSRIRLYDLRDLSLSMKYKGY 783
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 134 PGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAV 193
P +L + H V S+ P + + AG D++I IWN+ + +L L H + V
Sbjct: 132 PWKLMRVISGHLGWVRSLAVEPNNEWFASGAG-DRTIKIWNLATGALRLT--LTGHISTV 188
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGS 252
+ S + ++ SCG D + D+E + + L+ V + HP +L ++GG
Sbjct: 189 RGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPR-LDLLVTGGR 247
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVE 281
G+ R+WD+RT H G + DV+
Sbjct: 248 DGVARVWDMRTRSNIHVLSGHTGTVADVQ 276
>UNIPROTKB|F1RGA9 [details] [associations]
symbol:CORO1C "Coronin" species:9823 "Sus scrofa"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:VPKKTTD EMBL:CT827801
Ensembl:ENSSSCT00000010896 Uniprot:F1RGA9
Length = 528
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/143 (29%), Positives = 72/143 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 183 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 241
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 242 LICTASKDKKVRVIDPRKQEIIAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 301
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ +T + +A HE S G +L
Sbjct: 302 WNPKTMEEPIALHEMDTSNGVLL 324
>UNIPROTKB|Q9NQW1 [details] [associations]
symbol:SEC31B "Protein transport protein Sec31B"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 EMBL:AL133352 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 EMBL:AF274863 EMBL:AL080141
EMBL:BX640914 EMBL:BC034946 EMBL:BC044569 EMBL:BC144313
IPI:IPI00023442 IPI:IPI00426029 IPI:IPI00853086 IPI:IPI00923389
IPI:IPI00954279 PIR:T12526 RefSeq:NP_056305.1 UniGene:Hs.18889
ProteinModelPortal:Q9NQW1 SMR:Q9NQW1 IntAct:Q9NQW1 STRING:Q9NQW1
PhosphoSite:Q9NQW1 DMDM:74762753 PaxDb:Q9NQW1 PRIDE:Q9NQW1
DNASU:25956 Ensembl:ENST00000370345 Ensembl:ENST00000451524
GeneID:25956 KEGG:hsa:25956 UCSC:uc001krc.1 UCSC:uc010qpo.1
CTD:25956 GeneCards:GC10M102237 HGNC:HGNC:23197 HPA:HPA035882
HPA:HPA040819 MIM:610258 neXtProt:NX_Q9NQW1 PharmGKB:PA162402792
InParanoid:Q9NQW1 OMA:RLECLYE OrthoDB:EOG470TGM PhylomeDB:Q9NQW1
ChiTaRS:SEC31B GenomeRNAi:25956 NextBio:47564 ArrayExpress:Q9NQW1
Bgee:Q9NQW1 CleanEx:HS_SEC31B Genevestigator:Q9NQW1 Uniprot:Q9NQW1
Length = 1179
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/244 (23%), Positives = 96/244 (39%)
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDI 261
G+ +L Y+ + L ++ + Q + AVR + +P NL SG S + +WD+
Sbjct: 95 GMLIL---YNVTHILSSGKEPVIAQKQKHTGAVRALDLNPFQGNLLASGASDSEIFIWDL 151
Query: 262 RTGKVAHEY-IQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSK-Q 319
V +S P D++ +Q VVWD+ + P+ K
Sbjct: 152 NNLNVPMTLGSKSQQPPEDIKALSWNRQ---AQHILSSAHPSGKAVVWDLRKNEPIIKVS 208
Query: 320 VYVEAYTCPCVRHHP-FDPYFVAQSNGNYIAIFSSTP-PFRLDKFKRYESHGVSGFPIKC 377
+ C + HP V S + + + F K ESH +
Sbjct: 209 DHSNRMHCSGLAWHPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVLESHSRGILSVSW 268
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
S D E L++ + D I N SSE+ K+ C DV + P P++ + S+NG
Sbjct: 269 S-QADAELLLTSAKDSQILCRNLGSSEVVYKLPTQSSWCFDVQWCPRDPSVFSAASFNGW 327
Query: 438 VSVY 441
+S+Y
Sbjct: 328 ISLY 331
>MGI|MGI:1345964 [details] [associations]
symbol:Coro1c "coronin, actin binding protein 1C"
species:10090 "Mus musculus" [GO:0000147 "actin cortical patch
assembly" evidence=TAS] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0006909 "phagocytosis"
evidence=TAS] [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA;TAS]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1345964 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 GO:GO:0006909
GO:GO:0051015 GO:GO:0000147 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:23603 KO:K13887
ChiTaRS:CORO1C EMBL:AF143957 EMBL:AK079327 EMBL:AK082986
EMBL:AK088101 EMBL:BC019444 EMBL:BC085498 IPI:IPI00124820
RefSeq:NP_035909.2 UniGene:Mm.260158 ProteinModelPortal:Q9WUM4
SMR:Q9WUM4 STRING:Q9WUM4 PhosphoSite:Q9WUM4 PaxDb:Q9WUM4
PRIDE:Q9WUM4 DNASU:23790 Ensembl:ENSMUST00000004646 GeneID:23790
KEGG:mmu:23790 InParanoid:Q9WUM4 OMA:VPKKTTD NextBio:303391
Bgee:Q9WUM4 CleanEx:MM_CORO1C Genevestigator:Q9WUM4
GermOnline:ENSMUSG00000004530 Uniprot:Q9WUM4
Length = 474
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/143 (29%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V WS+ G
Sbjct: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWSRNGS 187
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 188 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 248 WNPKNMQEPIALHEMDTSNGVLL 270
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 147 (56.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 48/153 (31%), Positives = 71/153 (46%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G L L H+ V S+ +SP LLAS D+++ +W+ L + L HS V
Sbjct: 727 GSLQQTLEGHSGWVLSVAFSPD-GRLLASGSFDKTVRLWD--PATGSLQQTLRGHSNWVR 783
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL-AVRVVKFHPENSNLFLSGGSK 253
V +S G + S +D + RL D G Q+ R VR V F P+ L SG
Sbjct: 784 SVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG-RLLASGSFD 842
Query: 254 GLLRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+RLWD TG + I G + +++F+ +G
Sbjct: 843 KTVRLWDPATGTLQQTLIIK-GTVTELQFSQDG 874
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 53 RPNQQHSGLRTEASVAGRYMSKR-ERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAY 111
RP Q LR +A + + ++ E+ LL P + + +AV+ V+ ++ +
Sbjct: 261 RPGVQMV-LRDNPDIASKSLREQFEKLLLQPLVILDQLGRQPQTAVI----VVDALDECE 315
Query: 112 LRQDILSLLRHLPKSHVRRS 131
QDI +++R LP +S
Sbjct: 316 HDQDIRAIIRLLPSLQKAKS 335
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 148 (57.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 42/147 (28%), Positives = 74/147 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNF--HSAAVNDVKWSQQ 201
H+ V ++SP +LL+S+ D ++ +W++ Q ++ + H+ V D ++S
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSE-DGTVRLWSL----QTFTCLVGYKGHNYPVWDTQFSPY 596
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
G + +S G+D +RL + + F LA V +FHP NSN +G + +RLWD
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWD 655
Query: 261 IRTGKVAHEYIQSLGPILDVEFTINGK 287
+ G + GPI + F+ NG+
Sbjct: 656 VLNGNCVRIFTGHKGPIHSLTFSPNGR 682
Score = 42 (19.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/121 (23%), Positives = 47/121 (38%)
Query: 12 SDDEPEPASKHEPELRSIFSPPSKRPRPDYPYPQTKPHPLHRPNQQHSGLRTEASVAGRY 71
++++ E A K EPE PP T PN + +S G
Sbjct: 5 AEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGTTNSG---PNGGGGNVAAASSAGGDG 61
Query: 72 MSKRERALLGPGIPAATDPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRRS 131
+ + + PA P P AAA + D RQ +L++L+ L +S++R +
Sbjct: 62 GTPKPSVAVSAVAPAGAAPVP------AAAPEASAPHD---RQTLLAVLQFLRQSNLREA 112
Query: 132 K 132
+
Sbjct: 113 E 113
Score = 40 (19.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/75 (26%), Positives = 26/75 (34%)
Query: 33 PSKRPRPDYPYP-QTKPHPLHRPNQQHSGLRTEASVAGRYMSKRERALLGPGIPAATDPK 91
P+ P P+ QT L Q S LR R E A+ G G P D
Sbjct: 82 PAAAPEASAPHDRQTLLAVLQFLRQ--SNLREAEEALRREARLLEEAVAGSGAPGEADSA 139
Query: 92 PDPSAVVAAAQVLGS 106
+A ++V S
Sbjct: 140 GAETASALLSRVTAS 154
Score = 38 (18.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 13/47 (27%), Positives = 18/47 (38%)
Query: 59 SGLRTEASVAGRYMSKRERALLGPGIPAATDPKPDPSAVVAAAQVLG 105
SG EA AG + + + P + P P S +A V G
Sbjct: 130 SGAPGEADSAGAETASALLSRVTASAPGPSAPDPPVSGASGSAAVSG 176
>UNIPROTKB|Q9BR76 [details] [associations]
symbol:CORO1B "Coronin-1B" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IBA] [GO:0030036 "actin cytoskeleton
organization" evidence=IBA] [GO:0051015 "actin filament binding"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
EMBL:CH471076 GO:GO:0051015 HOGENOM:HOG000166356 HOVERGEN:HBG059978
OrthoDB:EOG4RNB8C InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:AK315399 EMBL:BC006449 IPI:IPI00007058 RefSeq:NP_001018080.1
RefSeq:NP_065174.1 UniGene:Hs.6191 ProteinModelPortal:Q9BR76
SMR:Q9BR76 IntAct:Q9BR76 MINT:MINT-5005556 STRING:Q9BR76
PhosphoSite:Q9BR76 DMDM:21263481 PaxDb:Q9BR76 PeptideAtlas:Q9BR76
PRIDE:Q9BR76 DNASU:57175 Ensembl:ENST00000341356
Ensembl:ENST00000393893 GeneID:57175 KEGG:hsa:57175 UCSC:uc001olk.1
CTD:57175 GeneCards:GC11M067205 HGNC:HGNC:2253 HPA:CAB017616
MIM:609849 neXtProt:NX_Q9BR76 PharmGKB:PA26769 InParanoid:Q9BR76
KO:K13886 OMA:QGERICR PhylomeDB:Q9BR76 GenomeRNAi:57175
NextBio:63197 ArrayExpress:Q9BR76 Bgee:Q9BR76 CleanEx:HS_CORO1B
Genevestigator:Q9BR76 GermOnline:ENSG00000172725 Uniprot:Q9BR76
Length = 489
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQG- 202
HTK V I W PT ++L SAG D + IWNV + ++ L R+ + H + +V W+ G
Sbjct: 131 HTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEE-LYRLDSLHPDLIYNVSWNHNGS 189
Query: 203 LFVLSCGYDCSSRLVDVEKG--IETQSFREELAVRVVKFHPENSNLFLSGGSK---GLLR 257
LF +C D S R++D +G + + E A + + +F +G S+ L
Sbjct: 190 LFCSACK-DKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLA 248
Query: 258 LWD 260
LWD
Sbjct: 249 LWD 251
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 63/313 (20%), Positives = 133/313 (42%)
Query: 131 SKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHS 190
S++P + H+ V I++S + LASA D++ I++V + +++ R++ H
Sbjct: 199 SELPTKEYHVFHDHSDEVWQISYSH-NGRYLASASKDKTAIIFDVVNL-KRVFRLIG-HI 255
Query: 191 AAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSG 250
V ++WS ++LSC D S L D G + + ++ +V + P+ + F++G
Sbjct: 256 DTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYKHGFSVSCCCWLPDGLS-FITG 314
Query: 251 GSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDV 310
+ W + G++ +++ + + I D+ T +G + I ++ V
Sbjct: 315 SPDCHITHWSLN-GEILYKW-EDVN-IYDMALTSDGTKLYIVGFEQLINAEDKHIAIYSV 371
Query: 311 SREVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGV 370
+ K T C+ D + + + R+ ++Y H +
Sbjct: 372 ETRECIKKISLQSKVTSICLSK---DSKYALTNLEPHTTFLWDLEENRI--VRQYMGHKL 426
Query: 371 SGFPI-KCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACID-VAFHPILPNI 428
F I C D ++SGS D I ++ S +L + + + C++ VA++P+ P
Sbjct: 427 GNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVK-CVNYVAYNPVDPYQ 485
Query: 429 IGSCSWNGDVSVY 441
S + V ++
Sbjct: 486 FASAGDDNTVRIW 498
>CGD|CAL0004044 [details] [associations]
symbol:orf19.268 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFH-SAAVNDVKWSQQ 201
HH ++ I W P + AS+ D ++ IW+ +L V F S V D+ S +
Sbjct: 122 HHKFGISCIQWWPYDTGMFASSSFDHTVKIWDT----NELTPVHTFDLSNKVYDIDISAE 177
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
+ + RL+D+ + VVK+HP NSN+ SGG G +++WD
Sbjct: 178 NALIATANDQPFIRLLDLNSTSSAHTLSGHKGKTLVVKWHPINSNILASGGYDGEVKIWD 237
Query: 261 IR 262
IR
Sbjct: 238 IR 239
>UNIPROTKB|Q5AEK0 [details] [associations]
symbol:RAD28 "Putative uncharacterized protein RAD28"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 143 HHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFH-SAAVNDVKWSQQ 201
HH ++ I W P + AS+ D ++ IW+ +L V F S V D+ S +
Sbjct: 122 HHKFGISCIQWWPYDTGMFASSSFDHTVKIWDT----NELTPVHTFDLSNKVYDIDISAE 177
Query: 202 GLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
+ + RL+D+ + VVK+HP NSN+ SGG G +++WD
Sbjct: 178 NALIATANDQPFIRLLDLNSTSSAHTLSGHKGKTLVVKWHPINSNILASGGYDGEVKIWD 237
Query: 261 IR 262
IR
Sbjct: 238 IR 239
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 137 (53.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 42/169 (24%), Positives = 75/169 (44%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+ V ++SP +LL S D + +W++ + + H+ V DV +S G
Sbjct: 678 HSGPVYGCSFSPDSQYLL-SCSEDTTARLWSMETMSNLVC--YKGHNFPVWDVSFSPFGF 734
Query: 204 FVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
+ + +D ++RL + F L+ V+FHP N N +G + RLW+I+
Sbjct: 735 YFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHP-NINYLATGSNDKSARLWEIQ 793
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVS 311
TGK ++ PI V F+ +G+ +++WD+S
Sbjct: 794 TGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTS-------VILWDLS 835
Score = 55 (24.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 361 KFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSS 403
K K+ + H + + FS DG L SGSSD ++ ++ + +
Sbjct: 839 KVKKMDGHTKCVYSL--DFSCDGSILASGSSDCTVRLWDVKKA 879
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 115 (45.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 127 HV-RRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVW--SRDQKLA 183
HV R + P L H V +S LA+ D ++ IW V + KL
Sbjct: 248 HVCSRKQFPCYTQQILTEHCNEVWFCKFS-NDGTKLATGSKDTTVIIWQVEPDTHQLKLL 306
Query: 184 RVLNFHSAAVNDVKWSQQGLFVLSCGYD-CSSR-LVDVEKG-IETQ-SFREELAVRVVKF 239
R L H+ V+ + WS +++++CG D CS L +V+ G + T+ S E ++ V +
Sbjct: 307 RTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAW 366
Query: 240 HPENSNLFLSGGSKG 254
+P+ F++GG +G
Sbjct: 367 NPDGKR-FVTGGQRG 380
Score = 75 (31.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 333 HPFDPYFVAQSNGNYIAIFSSTPPFRL----DKFKRYESHGVS-GF-PIKCSFSLDGEKL 386
HP + V++ NG + +T L D+ + GV+ GF I F E
Sbjct: 439 HPIMSFTVSK-NGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDF 497
Query: 387 V-SGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGDVSVY 441
+ SGS D +Y ++ RS ++ + + V+++P +P+++ S S +G V ++
Sbjct: 498 IASGSEDHKVYIWHKRSELPIVELTGHTRTVNCVSWNPCIPSLMASASDDGTVRIW 553
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 45 QTKPHPLHRPNQQHSGLRTEASVA 68
Q + HP + N +GL++ A A
Sbjct: 8 QEQNHPANTQNGDANGLQSNAGSA 31
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 101 (40.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 184 RVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREE-LAVRVVKFHPE 242
+VL+ HS +V VK++ G + LS D S +L +V KG SF E + + +
Sbjct: 8 KVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGDLVSTSD 67
Query: 243 NSNLFLSGGSKGLLRLWDIRTGKVAHEY 270
N LF S K L + WDI +G+V +
Sbjct: 68 NKQLF-SCAEKQLYQ-WDIASGQVIRRF 93
Score = 81 (33.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 17/64 (26%), Positives = 26/64 (40%)
Query: 360 DKFKRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDV 419
+ K Y+ H + I + D ++SGS D Y Y S +L K+ + V
Sbjct: 241 ETLKEYKGHKNKVYKINSCSNFDDSLIISGSEDNDFYIYELLSGKLLSKLSGHSNIITHV 300
Query: 420 AFHP 423
HP
Sbjct: 301 DSHP 304
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 135 (52.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 52/195 (26%), Positives = 86/195 (44%)
Query: 73 SKRERALL-GPGIPAAT-DPKPDPSAVVAAAQVLGSISDAYLRQDILSLLRHLPKSHVRR 130
S E+AL+ GP +P + +P A GS S+ L +L+ +P R
Sbjct: 97 SATEKALVVGPTLPPRDLNNTGNPGKSTAILPAPGSFSERNL--STAALMERMPSRWPRP 154
Query: 131 S-KIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFH 189
P + L H V S+ + P++ + D++I IW+V + KL L H
Sbjct: 155 EWHAPWKNYRVLQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVATGVLKLT--LTGH 211
Query: 190 SAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREEL-AVRVVKFHPENSNLFL 248
V + S + ++ S G D + D+E+ +S+ L V + HP ++ L
Sbjct: 212 IGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHP-TLDVVL 270
Query: 249 SGGSKGLLRLWDIRT 263
+GG + R+WDIRT
Sbjct: 271 TGGRDSVCRVWDIRT 285
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 385 KLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHP 423
++++GS D +I F++ R + I +++ +A HP
Sbjct: 309 QVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHP 347
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 141 (54.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 161 LASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVE 220
L S D SI W++ S + + H+ V D+ S L+ S +D ++RL +
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTV--LYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFD 410
Query: 221 KGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILD 279
+ + + LA V VKFHP NSN +G + +RLW + G + GP+L
Sbjct: 411 RTYPLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLS 469
Query: 280 VEFTINGK 287
+ F+ NGK
Sbjct: 470 LAFSPNGK 477
Score = 45 (20.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSS 403
+FS D + S S D S+ ++ RSS
Sbjct: 513 TFSPDSSLVASASMDNSVRVWDIRSS 538
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/144 (29%), Positives = 66/144 (45%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L HT + S+ S L+ + SI +W++ + K+ R L H A + + +
Sbjct: 58 SLTGHTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAA--KILRTLLGHKANICSLDFH 114
Query: 200 QQGLFVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G FV S D +L DV KG + AVR ++F P+ L S ++L
Sbjct: 115 PYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL-ASAADDHTVKL 173
Query: 259 WDIRTGKVAHEYIQSLGPILDVEF 282
WD+ GKV E+ GP+ VEF
Sbjct: 174 WDLTAGKVMFEFTGHYGPVNVVEF 197
>UNIPROTKB|B4E3S0 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 HOVERGEN:HBG059978
InterPro:IPR015505 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08954 UniGene:Hs.330384 HGNC:HGNC:2254 ChiTaRS:CORO1C
EMBL:AC007569 EMBL:AK304839 EMBL:AK316504 IPI:IPI01011988
SMR:B4E3S0 STRING:B4E3S0 Ensembl:ENST00000421578 Uniprot:B4E3S0
Length = 369
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 24 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 82
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 83 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 142
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 143 WNPKNMQEPIALHEMDTSNGVLL 165
>UNIPROTKB|A6QLZ8 [details] [associations]
symbol:CORO6 "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
CTD:84940 OMA:PFYDADS EMBL:DAAA02048621 EMBL:BC148144
IPI:IPI00685662 RefSeq:NP_001095752.1 UniGene:Bt.6619 SMR:A6QLZ8
Ensembl:ENSBTAT00000001490 GeneID:614661 KEGG:bta:614661
NextBio:20899219 Uniprot:A6QLZ8
Length = 431
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/128 (28%), Positives = 69/128 (53%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V ++W PT ++L SAG D I IWNV + + L+ + + H ++ V W+ G
Sbjct: 130 HSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLS-LDDMHPDVIHSVCWNTNGS 188
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVR--------VVKFH-PENSNLFLSGGSK 253
+ + D + R++D KG + +F E +A++ ++ F+ P++S ++L G
Sbjct: 189 LLATTCKDKTLRIIDPRKGQVVANNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGD 248
Query: 254 GLLRLWDI 261
+R ++I
Sbjct: 249 SSIRYFEI 256
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 58/297 (19%), Positives = 116/297 (39%)
Query: 133 IPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAA 192
+ G S + H VN + + LLA+AG Q++ ++++ + + H
Sbjct: 20 LTGVCSRTIQHSDSQVNRLEIT-NDKKLLATAG-HQNVRLYDIRTTNPNPVASFEGHRGN 77
Query: 193 VNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSGGS 252
V V + Q ++++ D + ++ DV ++++ V V HP L +S
Sbjct: 78 VTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVIHPNQGEL-ISCDR 136
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSR 312
G +R+WD+ + H+ L P D ++ VW++
Sbjct: 137 DGNIRIWDLGENQCTHQ----LTPEDDT--SLQSLSMASDGSMLAAANTKGNCYVWEMPN 190
Query: 313 EVPLSKQVYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRL----DKFKRYES- 367
S V + H + + S+ ++A S+ R+ D FK +
Sbjct: 191 HTDASHLKPVTKFRA----HSTYITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTL 246
Query: 368 HGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPI 424
G + C+FS D LV+ SSD + ++ + E+ R+ + + + VA + +
Sbjct: 247 DGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYGGHHKGAVCVALNDV 303
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 141 (54.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 47/179 (26%), Positives = 85/179 (47%)
Query: 135 GRLS-TALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAV 193
GR S T L H+ V S +SP +L+S+ D +I +W+ + L H+ V
Sbjct: 407 GRRSYTLLLGHSGPVYSATFSPPGDFVLSSSA-DTTIRLWST-KLNANLV-CYKGHNYPV 463
Query: 194 NDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGS 252
D ++S G + SC +D ++R+ +++ + L+ V V++HP N N +G S
Sbjct: 464 WDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHP-NCNYIATGSS 522
Query: 253 KGLLRLWDIRTGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVS 311
+RLWD++TG+ +I +L + + +G+ I++WD+S
Sbjct: 523 DKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGT-------IMMWDLS 574
Score = 46 (21.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSS 403
S+S +G L SGS+D ++ ++ SS
Sbjct: 593 SYSGEGSLLASGSADCTVKLWDVTSS 618
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 66/256 (25%), Positives = 106/256 (41%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
HT ++ + P+ + L S+G D +I +W++ + L L H+ AV W G
Sbjct: 401 HTDWLSGCCFHPSGSKLATSSG-DSTIKLWDLNKGECTLT--LEGHNHAVWSCTWHSCGD 457
Query: 204 FVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
FV S D +S++ DV + + +V ++F P SN+ L+ + L +WD R
Sbjct: 458 FVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPF-SNILLTASADKTLSVWDAR 516
Query: 263 TGKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSREVPLSKQVYV 322
TGK + + D FT G +WD + +P+ V +
Sbjct: 517 TGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTK-------LWDFRKLIPI---VSI 566
Query: 323 EAYTCPCVRHHP-FDPY--FVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSF 379
+ P + FD +AQ++ N I ++ K +ES S F
Sbjct: 567 DVG--PSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQIHKLVGHESEVHS-----VVF 619
Query: 380 SLDGEKLVSGSSDGSI 395
S GE L SG SDG+I
Sbjct: 620 SHLGENLYSGGSDGTI 635
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 38/153 (24%), Positives = 75/153 (49%)
Query: 136 RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVND 195
R L HT +VNSI + P +++L +A D+++ +W+ +R K + L H +VND
Sbjct: 477 RCRYTLYGHTDSVNSIEFFP-FSNILLTASADKTLSVWD--ARTGKCEQSLYGHMHSVND 533
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFRE-ELAVRVVKFHPENSNLFLSGGSKG 254
++ +G + SC ++L D K I S + V F ++ + + G
Sbjct: 534 ATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFD-QSGRVLAQASANG 592
Query: 255 LLRLWDIRTGKVAHEYIQSLGPILDVEFTINGK 287
++ L D+++G++ H+ + + V F+ G+
Sbjct: 593 IIHLLDLKSGQI-HKLVGHESEVHSVVFSHLGE 624
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 161 LASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVE 220
+AS G D ++ +W ++ ++ +A + V+ V + G F+ + YD S RL D+E
Sbjct: 325 MASGGHDGAVKLWG-FNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLE 383
Query: 221 KGIETQSFREE---LAVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPI 277
+ +T+ +E V + +H + S L ++GG R+WD+RTG+ LG +
Sbjct: 384 Q--KTEVLHQEGHAKPVHCLSYHSDGSVL-VTGGLDAFGRVWDLRTGRCIMFLEGHLGAV 440
Query: 278 LDVEFTING 286
V+F+ NG
Sbjct: 441 FGVDFSPNG 449
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/144 (29%), Positives = 66/144 (45%)
Query: 140 ALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWS 199
+L HT + S+ S L+ + SI +W++ + K+ R L H A + + +
Sbjct: 58 SLTGHTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAA--KILRTLLGHKANICSLDFH 114
Query: 200 QQGLFVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRL 258
G FV S D +L DV KG + AVR ++F P+ L S ++L
Sbjct: 115 PYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL-ASAADDHTVKL 173
Query: 259 WDIRTGKVAHEYIQSLGPILDVEF 282
WD+ GKV E+ GP+ VEF
Sbjct: 174 WDLTAGKVMFEFTGHSGPVNVVEF 197
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 120 (47.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 35/120 (29%), Positives = 52/120 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H + V ++WSP + LASA D + CIW + + L H V V W+ G
Sbjct: 60 HQRTVRKVSWSPC-GNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGS 118
Query: 204 FVLSCGYDCSSRL--VDVEKGIETQSFREELA--VRVVKFHPENSNLFLSGGSKGLLRLW 259
+ +C D S + VD E+ E S V+ V +HP N L S ++L+
Sbjct: 119 LLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHP-NQELLASASYDDSVKLY 177
Score = 110 (43.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 139 TALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQ-KLARVLNFHSAAVNDVK 197
T L H V S+ W+P+ + LLA+ D+S+ +W V ++ + VLN H+ V V
Sbjct: 99 TTLEGHENEVKSVAWAPSGS-LLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVV 157
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
W + S YD S +L E+
Sbjct: 158 WHPNQELLASASYDDSVKLYREEE 181
Score = 59 (25.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 410 KAYEQACIDVAFHPILPNIIGSCSWNGDVSVY 441
+A+ Q V +HP PN++ SCS +G+++ +
Sbjct: 296 RAHTQDVNCVTWHPKEPNLLASCSDDGEMAFW 327
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/143 (30%), Positives = 65/143 (45%)
Query: 141 LCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQ 200
L HT + S+ S L+ + SI +W++ + K+ R L H A + + +
Sbjct: 58 LTGHTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAA--KILRTLLGHKANICSLDFHP 114
Query: 201 QGLFVLSCGYDCSSRLVDVE-KGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLW 259
G FV S D +L DV KG + AVR ++F P+ L S ++LW
Sbjct: 115 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWL-ASAADDHTVKLW 173
Query: 260 DIRTGKVAHEYIQSLGPILDVEF 282
D+ GKV E+ GP+ VEF
Sbjct: 174 DLTAGKVMFEFTGHYGPVNVVEF 196
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 41/151 (27%), Positives = 67/151 (44%)
Query: 137 LSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDV 196
L T L H + S+++ P + +AS +D I +W+V R + H+ AV +
Sbjct: 97 LRTLLGHKAN-ICSLDFHP-YGSFVASGSLDTDIKLWDV--RRKGCIFKYKSHTQAVRCL 152
Query: 197 KWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHPENSNLFLSGGSKGL 255
++S G ++ S D + +L D+ G F V VV+FHP L SG S
Sbjct: 153 RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMT 212
Query: 256 LRLWDIRTGKVAHEYIQSLGPILDVEFTING 286
+R WD+ V + P+ + F +G
Sbjct: 213 IRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243
>RGD|1311288 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1311288 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:BC087110 EMBL:BC091364 IPI:IPI00196528 RefSeq:NP_001009686.1
UniGene:Rn.16542 ProteinModelPortal:Q5M9G8 STRING:Q5M9G8
Ensembl:ENSRNOT00000059987 GeneID:305895 KEGG:rno:305895
UCSC:RGD:1311288 InParanoid:Q5M9G8 NextBio:655204
Genevestigator:Q5M9G8 Uniprot:Q5M9G8
Length = 549
Score = 114 (45.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 365 YESHGVSGFPIKCSFS---LDGEKLV-SGSSDGSIYFYNCRSSELERKIKAYEQACI-DV 419
Y HGV I+C FS G++ + SG S G + Y+ S + +K+ ++ AC+ DV
Sbjct: 431 YRGHGVLHTLIRCRFSPAHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHK-ACVRDV 489
Query: 420 AFHPILPNIIGSCSWNGDVSVYE 442
++HP I+ S SW+G + +++
Sbjct: 490 SWHPFEEKIVSS-SWDGSLRLWQ 511
Score = 72 (30.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNVWSR-DQKLARVL--NFHSAAVNDVKWSQQGL 203
+V + ++P H L S+ D I I +++ D A L + AV + S G
Sbjct: 220 SVLDVAFTPDGNHFLYSSWSDY-IHICSIYGEGDTHTALDLRPDERRFAVFSIAVSSDGR 278
Query: 204 FVLSCGYDCSSRLVDVEKGIET-QSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDIR 262
VL D + D E+ T Q E V V F +S + SGG + ++WD R
Sbjct: 279 EVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWDRR 338
Query: 263 T 263
T
Sbjct: 339 T 339
Score = 60 (26.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 240 HPENSNLFLSGGSKGLLRLWDIRTGKVAHEY----IQSLG-PILDVEFTINGKQF 289
+ ++ +F+S +RL+D R G+ H++ + +G +LDV FT +G F
Sbjct: 180 YSKDGQIFMSACQDQTIRLYDCRYGRF-HKFKSIKARDVGWSVLDVAFTPDGNHF 233
Score = 57 (25.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSR------DQKLARVLNFHSAAVNDVK 197
H VN++ ++ + +L S G D +IC VW R D K L H + +
Sbjct: 306 HEDDVNAVAFADISSQILFSGG-DDAIC--KVWDRRTMREDDPKPVGALAGHQDGITFID 362
Query: 198 WSQQGLFVLSCGYDCSSRLVDVEK 221
+++S D + +L D+ +
Sbjct: 363 SKGDARYLISNSKDQTIKLWDIRR 386
Score = 47 (21.6 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 125 KSHVRRSKIPGRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLAR 184
+S V +P LS + KA I +S + SA DQ+I ++ D + R
Sbjct: 153 QSRVMSHFLPNDLSFTDTYSQKAFCGI-YSKD-GQIFMSACQDQTIRLY-----DCRYGR 205
Query: 185 VLNFHSAAVNDVKWS 199
F S DV WS
Sbjct: 206 FHKFKSIKARDVGWS 220
Score = 37 (18.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 247 FLSGGSKG-LLRLWDIR 262
+L SK ++LWDIR
Sbjct: 369 YLISNSKDQTIKLWDIR 385
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 50/182 (27%), Positives = 74/182 (40%)
Query: 141 LCHHTKAVNSINWSPT-HAHLLASAGMDQSICIWNVWSR---DQKL--ARVLNFHSAAVN 194
L H K I+W+P HLL S DQSIC+W++ + D L + N H++ V
Sbjct: 170 LTGHKKEGYGISWNPRKEGHLL-SCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVE 228
Query: 195 DVKWSQ-QGLFVLSCGYDCSSRLVDVEKGIETQSFRE--ELAVRVVKFHPENSNLFLSGG 251
DV W F S G D + D G + E V + F+P L +G
Sbjct: 229 DVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGS 288
Query: 252 SKGLLRLWDIRT-GKVAHEYIQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDV 310
+ + LWD+R G H I + V+F+ + + + VWD+
Sbjct: 289 TDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNE------TVLASCGSDRRVNVWDL 342
Query: 311 SR 312
SR
Sbjct: 343 SR 344
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 48/155 (30%), Positives = 74/155 (47%)
Query: 136 RLSTALC-H----HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHS 190
+ ST +C H H V S+ +P+ + SAG D I IWN+ S + L + L+ HS
Sbjct: 603 KASTGVCLHVLRGHVGRVYSVTINPSRQQCI-SAGTDAKIRIWNLESGE--LLQTLHGHS 659
Query: 191 AAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELAVRVVKFHPENSNLFLSG 250
V+ V ++Q L S D S R+ D+ G S R+ L + ++ +
Sbjct: 660 NLVSQVTFNQNILVSASAPPDTSLRVWDLNTG----SCRDILKCPLGHIFFQHDESKVVS 715
Query: 251 GSKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTIN 285
GS L+LWDIR+GK+ + + L I V + N
Sbjct: 716 GSHSTLQLWDIRSGKLVRDLLTDLDIIWQVAYNEN 750
>UNIPROTKB|A2VDN8 [details] [associations]
symbol:CORO1C "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:23603 KO:K13887 EMBL:DAAA02045489
EMBL:BC133331 IPI:IPI00692453 RefSeq:NP_001075059.1 UniGene:Bt.9751
SMR:A2VDN8 Ensembl:ENSBTAT00000010507 GeneID:515798 KEGG:bta:515798
InParanoid:A2VDN8 NextBio:20872007 Uniprot:A2VDN8
Length = 474
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 187
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 188 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 248 WNPKNMEEPIALHEMDTSNGVLL 270
>UNIPROTKB|F1Q1F6 [details] [associations]
symbol:CORO1C "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:23603 KO:K13887
EMBL:AAEX03014753 RefSeq:XP_543444.2 ProteinModelPortal:F1Q1F6
Ensembl:ENSCAFT00000035670 GeneID:486318 KEGG:cfa:486318
Uniprot:F1Q1F6
Length = 474
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 187
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 188 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 248 WNPKNMQEPIALHEMDTSNGVLL 270
>UNIPROTKB|Q9ULV4 [details] [associations]
symbol:CORO1C "Coronin-1C" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] [GO:0006909 "phagocytosis"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007165 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0006909 GO:GO:0051015 EMBL:CH471054 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 EMBL:AB030656 EMBL:AK096363 EMBL:AL162070
EMBL:BC002342 IPI:IPI00943173 RefSeq:NP_055140.1 UniGene:Hs.330384
ProteinModelPortal:Q9ULV4 SMR:Q9ULV4 IntAct:Q9ULV4
MINT:MINT-1145632 STRING:Q9ULV4 PhosphoSite:Q9ULV4 DMDM:12643898
OGP:Q9ULV4 PaxDb:Q9ULV4 PeptideAtlas:Q9ULV4 PRIDE:Q9ULV4
DNASU:23603 Ensembl:ENST00000261401 Ensembl:ENST00000541050
GeneID:23603 KEGG:hsa:23603 UCSC:uc001tnj.3 CTD:23603
GeneCards:GC12M109038 HGNC:HGNC:2254 HPA:HPA041737 MIM:605269
neXtProt:NX_Q9ULV4 PharmGKB:PA26770 InParanoid:Q9ULV4 KO:K13887
PhylomeDB:Q9ULV4 ChiTaRS:CORO1C GenomeRNAi:23603 NextBio:46288
ArrayExpress:Q9ULV4 Bgee:Q9ULV4 CleanEx:HS_CORO1C
Genevestigator:Q9ULV4 GermOnline:ENSG00000110880 Uniprot:Q9ULV4
Length = 474
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 187
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 188 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 248 WNPKNMQEPIALHEMDTSNGVLL 270
>RGD|1564490 [details] [associations]
symbol:Coro1c "coronin, actin binding protein 1C" species:10116
"Rattus norvegicus" [GO:0015629 "actin cytoskeleton" evidence=IBA]
[GO:0030036 "actin cytoskeleton organization" evidence=IBA]
[GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1564490 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0030036 GO:GO:0015629 GO:GO:0051015 EMBL:CH473973
GeneTree:ENSGT00550000074317 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
CTD:23603 KO:K13887 OMA:VPKKTTD RefSeq:NP_001102797.1
UniGene:Rn.45957 PRIDE:G3V624 Ensembl:ENSRNOT00000000886
GeneID:501841 KEGG:rno:501841 NextBio:709990 Uniprot:G3V624
Length = 474
Score = 139 (54.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V WS+ G
Sbjct: 129 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWSRNGS 187
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D + I + + R ++ + N+F +G S+ L L
Sbjct: 188 LICTASKDKKVRVIDPRRQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 247
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 248 WNPKNMQEPIALHEMDTSNGVLL 270
>UNIPROTKB|A7MAP0 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 HOVERGEN:HBG059978
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 UniGene:Hs.330384
HGNC:HGNC:2254 ChiTaRS:CORO1C EMBL:AC007569 EMBL:AM849477
IPI:IPI01022161 SMR:A7MAP0 STRING:A7MAP0 Ensembl:ENST00000549772
Uniprot:A7MAP0
Length = 480
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 135 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 193
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 194 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 253
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 254 WNPKNMQEPIALHEMDTSNGVLL 276
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 111 (44.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 46/155 (29%), Positives = 71/155 (45%)
Query: 143 HHTKA----VNSINWSPTHAHLLA-SAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVK 197
HH + V+ + + P A LL S+ D SI +W++ R LA VL H +AV +
Sbjct: 145 HHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSC-LA-VLTAHYSAVTSLT 202
Query: 198 WSQQGLFVLSCGYD--C---------SSRLVDVEKGIET-----QSFREELAVRVVKFHP 241
+S G +LS G D C ++R V V + +E + EL V+ H
Sbjct: 203 FSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLH- 261
Query: 242 ENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGP 276
FL+ G +G LR+W+ +G+ H + GP
Sbjct: 262 -----FLTAGDQGALRVWEAASGRCVHAQQRLRGP 291
Score = 78 (32.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 329 CVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVS 388
CV+ P D S I +++ F K +E H S +K +F G +L+S
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWA-LQDFSC--LKTFEGHDAS--VLKVAFVSRGTQLLS 580
Query: 389 GSSDGSIYFYNCRSSELERKIKAYE 413
SDG + + +++E R + A+E
Sbjct: 581 SGSDGLLKLWTIKNNECVRTLDAHE 605
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 111 (44.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 46/155 (29%), Positives = 71/155 (45%)
Query: 143 HHTKA----VNSINWSPTHAHLLA-SAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVK 197
HH + V+ + + P A LL S+ D SI +W++ R LA VL H +AV +
Sbjct: 145 HHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSC-LA-VLTAHYSAVTSLT 202
Query: 198 WSQQGLFVLSCGYD--C---------SSRLVDVEKGIET-----QSFREELAVRVVKFHP 241
+S G +LS G D C ++R V V + +E + EL V+ H
Sbjct: 203 FSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLH- 261
Query: 242 ENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGP 276
FL+ G +G LR+W+ +G+ H + GP
Sbjct: 262 -----FLTAGDQGALRVWEAASGRCVHAQQRLRGP 291
Score = 78 (32.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 329 CVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKFKRYESHGVSGFPIKCSFSLDGEKLVS 388
CV+ P D S I +++ F K +E H S +K +F G +L+S
Sbjct: 526 CVQFSPMDQVLATASADGTIKLWA-LQDFSC--LKTFEGHDAS--VLKVAFVSRGTQLLS 580
Query: 389 GSSDGSIYFYNCRSSELERKIKAYE 413
SDG + + +++E R + A+E
Sbjct: 581 SGSDGLLKLWTIKNNECVRTLDAHE 605
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 63/279 (22%), Positives = 114/279 (40%)
Query: 135 GRLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVN 194
G L++ L H + ++ W+ + + SAG+D++ IW+ + + K + FHSA
Sbjct: 252 GNLASTLGQHKGPIFALKWNKK-GNFILSAGVDKTTIIWDAHTGEAK--QQFPFHSAPAL 308
Query: 195 DVKWSQQGLFVLSCGYDCSSRLVDV--EKGIET-QSFREELAVRVVKFHPENSNLFLSGG 251
DV W F SC D + + E+ I+T Q E V +K+ P NL S
Sbjct: 309 DVDWQSNNTFA-SCSTDMCIHVCKLGQERPIKTFQGHTNE--VNAIKWDP-TGNLLASCS 364
Query: 252 SKGLLRLWDIRTGKVAHEYIQSLGPILDVEFTING---KQFXXXXXXXXXXXXXXXIVVW 308
L+LW ++ H+ I ++++ G + +W
Sbjct: 365 DDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLW 424
Query: 309 DVSREV---PLSKQ---VYVEAYTCPCVRHHPFDPYFVAQSNGNYIAIFSSTPPFRLDKF 362
D R L+K VY A++ P RH + S + I+++ ++ +
Sbjct: 425 DAERGACIHTLTKHQEPVYSVAFS-PDGRH------LASGSFDKCVHIWNTQSGALVNSY 477
Query: 363 KRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCR 401
+ G G C ++ G+K+ + +SDGS+ + R
Sbjct: 478 R-----GTGGIFEVC-WNSTGDKVGASASDGSVCVLDLR 510
Score = 113 (44.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 146 KAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFV 205
K V S++W+ + LLA+ D +W++D LA L H + +KW+++G F+
Sbjct: 222 KDVTSLDWN-SEGTLLATGSYDGFA---RIWTKDGNLASTLGQHKGPIFALKWNKKGNFI 277
Query: 206 LSCGYDCSSRLVDVEKGIETQSF 228
LS G D ++ + D G Q F
Sbjct: 278 LSAGVDKTTIIWDAHTGEAKQQF 300
Score = 59 (25.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 378 SFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPILPNIIGSCSWNGD 437
+FS DG L SGS D ++ +N +S L + +V ++ + +G+ + +G
Sbjct: 446 AFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRG-TGGIFEVCWNST-GDKVGASASDGS 503
Query: 438 VSVYE 442
V V +
Sbjct: 504 VCVLD 508
>UNIPROTKB|G3MWI5 [details] [associations]
symbol:CORO1C "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:VPKKTTD EMBL:DAAA02045489
Ensembl:ENSBTAT00000065151 Uniprot:G3MWI5
Length = 524
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 179 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 237
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 238 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 297
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 298 WNPKNMEEPIALHEMDTSNGVLL 320
>UNIPROTKB|F1Q1Q0 [details] [associations]
symbol:CORO1C "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 OMA:VPKKTTD
EMBL:AAEX03014753 Ensembl:ENSCAFT00000017981 Uniprot:F1Q1Q0
Length = 525
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 180 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 238
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 239 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 298
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 299 WNPKNMQEPIALHEMDTSNGVLL 321
>UNIPROTKB|A7MAP1 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
UniGene:Hs.330384 HGNC:HGNC:2254 ChiTaRS:CORO1C OMA:VPKKTTD
EMBL:AC007569 EMBL:AM849478 IPI:IPI00867509
ProteinModelPortal:A7MAP1 SMR:A7MAP1 STRING:A7MAP1 PRIDE:A7MAP1
Ensembl:ENST00000420959 UCSC:uc009zva.3 ArrayExpress:A7MAP1
Bgee:A7MAP1 Uniprot:A7MAP1
Length = 527
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H+K V + W PT ++L SAG D +I IWNV + + L + + HS + +V W++ G
Sbjct: 182 HSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGT-GEALINLDDMHSDMIYNVSWNRNGS 240
Query: 204 FVLSCGYDCSSRLVDVEKG-IETQSFREELAVRVVK-FHPENSNLFLSGGSK---GLLRL 258
+ + D R++D K I + + R ++ + N+F +G S+ L L
Sbjct: 241 LICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQLAL 300
Query: 259 WDIRTGK--VA-HEYIQSLGPIL 278
W+ + + +A HE S G +L
Sbjct: 301 WNPKNMQEPIALHEMDTSNGVLL 323
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 38/137 (27%), Positives = 69/137 (50%)
Query: 147 AVNSINWSPTHAHLLASAGMDQSICIWNV--WSRDQKLARVLNFHSAAVNDVKW-SQQGL 203
+ N + WS ++LLA+A + + +W++ + R ++L V N H + V + S +
Sbjct: 67 SANDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLL-VYNEHERTAHTVTFHSSEPN 125
Query: 204 FVLSCGYDCSSRLVDV--EKGIETQSFREELAVRVVKFHPENSNLFLSGGSKGLLRLWDI 261
++S D + + D+ +K I T E +VR VKF P N+F + G ++LWD+
Sbjct: 126 ILISGSQDGTIKCFDIRSDKSINTYFCNSE-SVRDVKFSPHTQNIFSAVSENGTVQLWDM 184
Query: 262 RT-GKVAHEYIQSLGPI 277
R K ++ GP+
Sbjct: 185 RKWDKCMVQFTAHYGPV 201
>ZFIN|ZDB-GENE-040426-2012 [details] [associations]
symbol:wdr24 "WD repeat domain 24" species:7955
"Danio rerio" [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2012 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 EMBL:BC045501 IPI:IPI00491202 RefSeq:NP_998228.1
UniGene:Dr.79568 ProteinModelPortal:Q7ZVL2 GeneID:406336
KEGG:dre:406336 InParanoid:Q7ZVL2 NextBio:20817956
ArrayExpress:Q7ZVL2 Uniprot:Q7ZVL2
Length = 779
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 45/202 (22%), Positives = 88/202 (43%)
Query: 144 HTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGL 203
H + VN + + PT ++L S D + +++ R ++ + S +V DV++S +
Sbjct: 113 HKRTVNKVCFHPTEVNMLLSGSQDGFMKCFDL--RKKESVSTFSGQSESVRDVQFSMKDY 170
Query: 204 FVLSCGYDCSS-RLVDVEKGIETQS-FREELA-VRVVKFHPENSNLFLSGGSKGLLRLWD 260
F + ++ + +L D+ + + F V +HPE+ +GG ++++WD
Sbjct: 171 FTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWD 230
Query: 261 IRTGKVAHEY-IQSLGPILDVEFTINGKQFXXXXXXXXXXXXXXXIVVWDVSRE-VPLSK 318
+ T +V Y +Q+ + V++ + I VWDV R +P +
Sbjct: 231 MSTNRVKEIYCVQTFASVARVKWRPERRYHLATCSMMVDHN----IYVWDVRRPFIPFAT 286
Query: 319 QVYVEAYTCPCVRHHPFDPYFV 340
+ T V H DPYF+
Sbjct: 287 FEEHKDVTTGIVWRHQHDPYFL 308
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 111 (44.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 37/134 (27%), Positives = 69/134 (51%)
Query: 157 HAHLLASAGMDQSICIWNVWSRDQKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRL 216
++HL S G D+++ +W+V + ++ R H+ VN V+++++ +LS D S R
Sbjct: 79 NSHL-CSGGGDKTVVLWDVATG--QVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRC 135
Query: 217 VDVE--KGIETQSFREEL-AVRVVKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQS 273
D K Q+ E + VK + + L+G G +R +D+R G+V+ +Y+ S
Sbjct: 136 WDCRSRKPEPVQTLDEARDGISSVKV---SDHEILAGSVDGRVRRYDLRMGQVSSDYVGS 192
Query: 274 LGPILDVEFTINGK 287
PI F+ +G+
Sbjct: 193 --PITCTCFSRDGQ 204
Score = 107 (42.7 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 44/158 (27%), Positives = 70/158 (44%)
Query: 124 PKSHVRRSKIPG-RLSTALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKL 182
P+ R ++P R+ T C AV ++ ++ + L + G D+++ +WN L
Sbjct: 4 PEPKPRAPELPQKRMKTLDCSQG-AVRAVRFNVDGNYCL-TCGSDKTLKLWNPLRGT--L 59
Query: 183 ARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKGIETQSFREELA-VRVVKFHP 241
R + H V D S + S G D + L DV G + FR V V+F+
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFN- 118
Query: 242 ENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILD 279
E + + LSG +R WD R+ K E +Q+L D
Sbjct: 119 EEATVILSGSIDSSVRCWDCRSRKP--EPVQTLDEARD 154
Score = 106 (42.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 180 QKLARVLNFHSAAVNDVKWSQQGLFVLSCGYDCSSRLVDVEKG--IETQSFRE-ELAVRV 236
QK + L+ AV V+++ G + L+CG D + +L + +G + T S E+
Sbjct: 15 QKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAA 74
Query: 237 VKFHPENSNLFLSGGSKGLLRLWDIRTGKVAHEYIQSLGPILDVEF 282
F +NS+L GG K ++ LWD+ TG+V ++ G + V+F
Sbjct: 75 GSF--DNSHLCSGGGDKTVV-LWDVATGQVVRKFRGHAGKVNTVQF 117
Score = 66 (28.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 365 YESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFHPI 424
Y H + + C S +VS S DG ++F++ L + +A+HP
Sbjct: 229 YVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPT 288
Query: 425 LPNII 429
P ++
Sbjct: 289 EPCLL 293
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/80 (22%), Positives = 41/80 (51%)
Query: 363 KRYESHGVSGFPIKCSFSLDGEKLVSGSSDGSIYFYNCRSSELERKIKAYEQACIDVAFH 422
+++ H +G F+ + ++SGS D S+ ++CRS + E ++ ++A ++
Sbjct: 103 RKFRGH--AGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPE-PVQTLDEARDGISSV 159
Query: 423 PILPNIIGSCSWNGDVSVYE 442
+ + I + S +G V Y+
Sbjct: 160 KVSDHEILAGSVDGRVRRYD 179
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 40/130 (30%), Positives = 72/130 (55%)
Query: 138 STALCHHTKAVNSINWSPTHAHLLASAGMDQSICIWNVWSRDQKL--ARVLNFHSAAVND 195
S+ + H K VN ++ S + A L+A+ GMD+ + +W V + +L A L+ H V D
Sbjct: 470 SSTMVAHGKDVNCVDISESDA-LIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGD 528
Query: 196 VKWSQQGLFVLSCGYDCSSRLVDV-EKG-IETQSFREELAVRVVKFHPENSNLFLSGGSK 253
VK+++ + SC D + ++ ++ EK ++T S RV+ F +S L +S S
Sbjct: 529 VKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVI-FARNDSQL-ISADSA 586
Query: 254 GLLRLWDIRT 263
G++++W I+T
Sbjct: 587 GIIKIWTIKT 596
WARNING: HSPs involving 373 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 442 427 0.00085 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 623
No. of states in DFA: 620 (66 KB)
Total size of DFA: 301 KB (2154 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.78u 0.12s 40.90t Elapsed: 00:00:02
Total cpu time: 40.84u 0.12s 40.96t Elapsed: 00:00:02
Start: Tue May 21 03:16:51 2013 End: Tue May 21 03:16:53 2013
WARNINGS ISSUED: 2