Query 013476
Match_columns 442
No_of_seqs 295 out of 3110
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 11:18:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013476.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013476hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3da1_A Glycerol-3-phosphate de 100.0 4.2E-44 1.4E-48 358.1 32.2 369 55-442 6-379 (561)
2 2rgh_A Alpha-glycerophosphate 100.0 6.7E-42 2.3E-46 342.9 37.6 357 70-442 31-399 (571)
3 2qcu_A Aerobic glycerol-3-phos 100.0 3.5E-38 1.2E-42 312.4 31.5 347 70-441 2-359 (501)
4 3dme_A Conserved exported prot 100.0 1.3E-32 4.4E-37 262.8 27.2 336 70-436 3-349 (369)
5 1y56_B Sarcosine oxidase; dehy 100.0 1.1E-31 3.7E-36 257.7 32.2 328 70-437 4-335 (382)
6 3nyc_A D-arginine dehydrogenas 100.0 7.3E-32 2.5E-36 258.7 29.4 320 69-437 7-338 (381)
7 2gag_B Heterotetrameric sarcos 100.0 9.1E-30 3.1E-34 246.2 31.8 325 70-438 20-356 (405)
8 2gf3_A MSOX, monomeric sarcosi 100.0 9.1E-30 3.1E-34 244.9 30.3 324 70-435 2-342 (389)
9 1ryi_A Glycine oxidase; flavop 100.0 4.9E-30 1.7E-34 246.2 24.3 323 69-436 15-341 (382)
10 2oln_A NIKD protein; flavoprot 100.0 4E-29 1.4E-33 241.0 29.0 328 71-439 4-358 (397)
11 3axb_A Putative oxidoreductase 100.0 8.1E-30 2.8E-34 249.7 24.3 321 69-438 21-399 (448)
12 3pvc_A TRNA 5-methylaminomethy 100.0 1.6E-29 5.6E-34 259.4 21.9 311 69-425 262-584 (689)
13 3ps9_A TRNA 5-methylaminomethy 100.0 2.1E-28 7.2E-33 251.0 24.6 305 70-425 271-588 (676)
14 1pj5_A N,N-dimethylglycine oxi 100.0 1.6E-27 5.4E-32 249.8 31.1 320 70-435 3-360 (830)
15 3dje_A Fructosyl amine: oxygen 100.0 2.4E-27 8.2E-32 231.5 30.2 326 69-439 4-366 (438)
16 2uzz_A N-methyl-L-tryptophan o 100.0 1.2E-27 4.1E-32 228.6 25.6 320 71-437 2-337 (372)
17 3c4n_A Uncharacterized protein 100.0 1.7E-27 5.6E-32 229.9 19.3 306 70-436 35-377 (405)
18 3g3e_A D-amino-acid oxidase; F 99.9 2.7E-28 9.2E-33 231.2 8.9 294 73-436 2-312 (351)
19 1c0p_A D-amino acid oxidase; a 99.9 4E-26 1.4E-30 217.3 18.6 275 70-408 5-293 (363)
20 4at0_A 3-ketosteroid-delta4-5a 99.8 2E-18 6.9E-23 171.1 16.0 204 69-297 39-265 (510)
21 1qo8_A Flavocytochrome C3 fuma 99.8 3.7E-17 1.3E-21 164.0 21.4 196 68-297 118-313 (566)
22 1y0p_A Fumarate reductase flav 99.7 8E-17 2.7E-21 161.8 21.5 195 68-297 123-318 (571)
23 3cgv_A Geranylgeranyl reductas 99.7 2.6E-17 9E-22 158.2 17.0 167 228-405 98-268 (397)
24 3oz2_A Digeranylgeranylglycero 99.7 1.8E-16 6.3E-21 152.1 18.0 167 228-407 98-270 (397)
25 2bs2_A Quinol-fumarate reducta 99.7 4.6E-16 1.6E-20 157.2 18.6 202 70-298 4-222 (660)
26 3nix_A Flavoprotein/dehydrogen 99.7 3.7E-16 1.3E-20 151.4 15.4 127 227-358 101-233 (421)
27 2wdq_A Succinate dehydrogenase 99.7 7.2E-16 2.5E-20 154.6 16.8 203 69-299 5-209 (588)
28 2h88_A Succinate dehydrogenase 99.7 7.1E-16 2.4E-20 154.8 16.4 196 70-298 17-219 (621)
29 1d4d_A Flavocytochrome C fumar 99.7 1.2E-15 4.2E-20 152.9 17.8 194 69-297 124-318 (572)
30 1chu_A Protein (L-aspartate ox 99.6 3E-15 1E-19 148.7 15.9 193 69-298 6-210 (540)
31 3e1t_A Halogenase; flavoprotei 99.6 3.4E-15 1.2E-19 148.0 15.4 75 228-306 107-181 (512)
32 3fmw_A Oxygenase; mithramycin, 99.6 1.8E-14 6.1E-19 144.0 19.1 75 228-308 144-218 (570)
33 3ihg_A RDME; flavoenzyme, anth 99.6 5.4E-14 1.8E-18 140.3 21.7 77 227-307 115-193 (535)
34 1kf6_A Fumarate reductase flav 99.6 9.5E-15 3.2E-19 146.8 16.3 192 69-298 3-199 (602)
35 2qa2_A CABE, polyketide oxygen 99.6 8.7E-14 3E-18 137.1 22.7 119 228-355 103-222 (499)
36 2qa1_A PGAE, polyketide oxygen 99.6 8.1E-14 2.8E-18 137.4 22.3 73 229-307 103-175 (500)
37 3gyx_A Adenylylsulfate reducta 99.6 7.8E-15 2.7E-19 148.2 15.3 66 231-297 165-234 (662)
38 2i0z_A NAD(FAD)-utilizing dehy 99.6 1.1E-14 3.9E-19 141.8 15.4 71 230-307 132-212 (447)
39 3atr_A Conserved archaeal prot 99.6 6.3E-14 2.2E-18 136.9 19.9 76 228-306 96-171 (453)
40 3i3l_A Alkylhalidase CMLS; fla 99.6 1E-14 3.5E-19 146.0 13.7 75 227-306 123-197 (591)
41 1jnr_A Adenylylsulfate reducta 99.6 4.7E-14 1.6E-18 143.1 16.4 191 69-298 20-220 (643)
42 3v76_A Flavoprotein; structura 99.6 1.2E-14 4E-19 139.6 10.7 69 229-306 129-207 (417)
43 2weu_A Tryptophan 5-halogenase 99.5 1.6E-14 5.5E-19 143.4 11.7 163 227-406 168-336 (511)
44 3rp8_A Flavoprotein monooxygen 99.5 2.5E-13 8.7E-18 130.8 18.2 68 228-306 123-191 (407)
45 2gmh_A Electron transfer flavo 99.5 1.9E-13 6.4E-18 137.2 17.1 78 228-306 140-230 (584)
46 3ka7_A Oxidoreductase; structu 99.5 1.1E-12 3.7E-17 127.1 20.7 57 232-296 196-252 (425)
47 2e5v_A L-aspartate oxidase; ar 99.5 5.6E-13 1.9E-17 130.4 18.2 176 73-297 1-177 (472)
48 3qvp_A Glucose oxidase; oxidor 99.5 2.8E-13 9.7E-18 134.7 14.8 63 241-305 236-303 (583)
49 2gqf_A Hypothetical protein HI 99.5 1.7E-13 5.7E-18 131.2 12.1 69 230-307 107-189 (401)
50 4dgk_A Phytoene dehydrogenase; 99.5 7E-13 2.4E-17 131.3 15.7 58 232-296 221-278 (501)
51 1rp0_A ARA6, thiazole biosynth 99.4 2.9E-12 9.8E-17 116.9 17.5 83 231-317 118-216 (284)
52 2aqj_A Tryptophan halogenase, 99.4 2.5E-12 8.6E-17 128.3 18.2 74 226-306 159-232 (538)
53 3nlc_A Uncharacterized protein 99.4 2.3E-12 7.9E-17 127.1 17.2 73 227-306 215-290 (549)
54 2dkh_A 3-hydroxybenzoate hydro 99.4 2E-12 6.7E-17 131.4 15.5 78 228-307 137-221 (639)
55 2e4g_A Tryptophan halogenase; 99.4 6.5E-12 2.2E-16 125.4 17.3 72 228-306 190-262 (550)
56 2x3n_A Probable FAD-dependent 99.4 2.7E-12 9.2E-17 123.3 13.0 72 228-307 103-176 (399)
57 2zxi_A TRNA uridine 5-carboxym 99.4 3E-12 1E-16 126.8 13.0 61 228-296 119-180 (637)
58 3q9t_A Choline dehydrogenase a 99.4 4.4E-13 1.5E-17 133.4 7.0 61 243-305 217-280 (577)
59 3ces_A MNMG, tRNA uridine 5-ca 99.4 2.5E-12 8.4E-17 127.9 11.4 61 228-296 120-181 (651)
60 1pn0_A Phenol 2-monooxygenase; 99.4 1.1E-11 3.6E-16 126.2 16.1 78 228-307 115-240 (665)
61 1k0i_A P-hydroxybenzoate hydro 99.4 3.4E-12 1.2E-16 122.4 11.8 72 230-306 101-172 (394)
62 2r0c_A REBC; flavin adenine di 99.3 1.4E-11 4.7E-16 123.0 15.1 73 228-307 134-206 (549)
63 3jsk_A Cypbp37 protein; octame 99.3 6.1E-11 2.1E-15 109.1 17.6 67 231-297 159-252 (344)
64 3alj_A 2-methyl-3-hydroxypyrid 99.3 4.3E-11 1.5E-15 114.0 17.4 66 228-305 103-168 (379)
65 3cp8_A TRNA uridine 5-carboxym 99.3 9.7E-12 3.3E-16 123.6 12.5 62 228-297 113-175 (641)
66 3fim_B ARYL-alcohol oxidase; A 99.3 5.6E-12 1.9E-16 125.2 10.5 62 242-305 218-286 (566)
67 2pyx_A Tryptophan halogenase; 99.3 2.5E-11 8.5E-16 120.7 14.4 73 227-306 170-243 (526)
68 3c96_A Flavin-containing monoo 99.3 1.7E-10 5.7E-15 111.1 19.6 74 228-306 103-178 (410)
69 2cul_A Glucose-inhibited divis 99.3 5.9E-11 2E-15 104.7 14.4 61 230-298 66-127 (232)
70 3nrn_A Uncharacterized protein 99.3 4.1E-11 1.4E-15 115.8 13.6 56 231-296 188-243 (421)
71 2gjc_A Thiazole biosynthetic e 99.3 1.9E-10 6.4E-15 105.3 16.7 66 231-296 145-239 (326)
72 2vou_A 2,6-dihydroxypyridine h 99.2 1.1E-10 3.6E-15 112.0 15.5 62 232-304 99-160 (397)
73 3t37_A Probable dehydrogenase; 99.2 1.9E-11 6.7E-16 121.7 10.7 58 244-305 223-281 (526)
74 3p1w_A Rabgdi protein; GDI RAB 99.2 1.5E-10 5.2E-15 111.7 15.5 64 223-295 250-313 (475)
75 2bry_A NEDD9 interacting prote 99.2 3.7E-11 1.3E-15 118.3 10.9 65 231-297 165-231 (497)
76 4a9w_A Monooxygenase; baeyer-v 99.2 3.2E-11 1.1E-15 113.6 9.8 59 231-297 75-133 (357)
77 2jbv_A Choline oxidase; alcoho 99.2 1.3E-10 4.5E-15 115.6 13.3 69 236-305 212-283 (546)
78 4fk1_A Putative thioredoxin re 99.2 1.4E-10 4.7E-15 106.9 12.5 38 68-105 3-40 (304)
79 3i6d_A Protoporphyrinogen oxid 99.2 1.5E-09 5.2E-14 106.3 20.7 38 70-107 4-48 (470)
80 1ju2_A HydroxynitrIle lyase; f 99.2 2.9E-11 1E-15 120.0 7.7 66 238-305 200-271 (536)
81 2ywl_A Thioredoxin reductase r 99.2 1.6E-10 5.5E-15 97.7 11.0 65 231-306 55-119 (180)
82 2bcg_G Secretory pathway GDP d 99.2 1.5E-10 5E-15 112.8 11.8 60 232-299 242-303 (453)
83 1n4w_A CHOD, cholesterol oxida 99.1 3.7E-10 1.3E-14 111.3 13.9 66 237-304 226-297 (504)
84 4hb9_A Similarities with proba 99.1 5.2E-10 1.8E-14 107.6 13.7 67 230-307 110-176 (412)
85 3d1c_A Flavin-containing putat 99.1 2.9E-10 9.9E-15 107.8 11.7 59 229-296 85-143 (369)
86 1gpe_A Protein (glucose oxidas 99.1 1.7E-10 5.8E-15 115.6 9.9 63 241-305 240-307 (587)
87 2xdo_A TETX2 protein; tetracyc 99.1 5.6E-10 1.9E-14 106.9 12.9 65 229-304 125-189 (398)
88 3k7m_X 6-hydroxy-L-nicotine ox 99.1 1.6E-09 5.5E-14 104.9 16.2 39 72-110 2-41 (431)
89 1kdg_A CDH, cellobiose dehydro 99.1 2.1E-10 7.3E-15 114.4 10.0 69 236-306 199-272 (546)
90 1d5t_A Guanine nucleotide diss 99.1 2.5E-09 8.7E-14 103.4 17.3 60 232-299 234-293 (433)
91 3pl8_A Pyranose 2-oxidase; sub 99.1 3.7E-10 1.3E-14 113.8 11.5 62 245-306 273-335 (623)
92 2xve_A Flavin-containing monoo 99.1 7.8E-10 2.7E-14 107.9 13.4 68 229-297 98-167 (464)
93 1yvv_A Amine oxidase, flavin-c 99.1 4.3E-10 1.5E-14 105.1 10.9 35 71-105 2-36 (336)
94 2gv8_A Monooxygenase; FMO, FAD 99.1 2.5E-09 8.7E-14 104.0 16.6 65 230-297 113-178 (447)
95 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 7.2E-11 2.5E-15 110.8 5.4 33 72-104 2-37 (342)
96 4gde_A UDP-galactopyranose mut 99.1 1.2E-09 4E-14 108.4 13.8 60 232-303 222-281 (513)
97 1coy_A Cholesterol oxidase; ox 99.1 1.3E-09 4.5E-14 107.5 13.9 67 237-304 231-302 (507)
98 3f8d_A Thioredoxin reductase ( 99.0 3E-10 1E-14 105.4 8.2 57 231-296 69-125 (323)
99 3lov_A Protoporphyrinogen oxid 99.0 6E-09 2E-13 102.2 17.9 37 69-105 2-40 (475)
100 1mo9_A ORF3; nucleotide bindin 99.0 8.1E-09 2.8E-13 102.4 18.3 74 231-307 254-329 (523)
101 3itj_A Thioredoxin reductase 1 99.0 9.4E-10 3.2E-14 102.8 10.7 60 231-296 83-142 (338)
102 3gwf_A Cyclohexanone monooxyge 99.0 1.4E-09 4.9E-14 107.8 12.2 62 230-297 85-148 (540)
103 2zbw_A Thioredoxin reductase; 99.0 3.6E-10 1.2E-14 105.6 7.4 58 231-296 64-121 (335)
104 4ap3_A Steroid monooxygenase; 99.0 1.9E-09 6.5E-14 107.1 12.9 62 230-297 97-160 (549)
105 4gcm_A TRXR, thioredoxin reduc 99.0 1.6E-09 5.5E-14 100.1 11.2 38 69-106 4-41 (312)
106 3ab1_A Ferredoxin--NADP reduct 99.0 1.1E-09 3.8E-14 103.4 10.3 59 231-296 73-131 (360)
107 3lzw_A Ferredoxin--NADP reduct 99.0 5.1E-10 1.7E-14 104.3 6.9 57 231-295 66-122 (332)
108 3s5w_A L-ornithine 5-monooxyge 99.0 2E-09 6.7E-14 105.4 11.2 61 232-294 127-190 (463)
109 3nks_A Protoporphyrinogen oxid 99.0 2.8E-09 9.7E-14 104.6 12.2 57 232-296 234-290 (477)
110 2q0l_A TRXR, thioredoxin reduc 99.0 1.1E-09 3.9E-14 101.0 8.8 58 230-296 57-114 (311)
111 1w4x_A Phenylacetone monooxyge 99.0 4.4E-09 1.5E-13 104.8 13.5 35 70-104 15-49 (542)
112 3uox_A Otemo; baeyer-villiger 99.0 2.5E-09 8.6E-14 106.2 11.7 62 230-297 85-148 (545)
113 3o0h_A Glutathione reductase; 98.9 1.2E-08 4.1E-13 100.2 14.9 67 232-306 232-301 (484)
114 3fbs_A Oxidoreductase; structu 98.9 3.4E-09 1.2E-13 97.0 10.2 34 71-104 2-35 (297)
115 1vdc_A NTR, NADPH dependent th 98.9 1.8E-09 6.2E-14 100.7 7.1 56 231-296 69-124 (333)
116 4dna_A Probable glutathione re 98.9 4.8E-09 1.7E-13 102.5 10.4 68 231-306 210-281 (463)
117 4a5l_A Thioredoxin reductase; 98.9 2.3E-09 7.9E-14 99.1 7.7 35 71-105 4-38 (314)
118 2q7v_A Thioredoxin reductase; 98.9 6.4E-09 2.2E-13 96.6 10.6 35 70-104 7-41 (325)
119 3dgh_A TRXR-1, thioredoxin red 98.9 1.1E-07 3.8E-12 93.3 19.6 63 232-296 227-289 (483)
120 3urh_A Dihydrolipoyl dehydroge 98.9 3.4E-08 1.1E-12 97.2 15.7 72 232-306 239-313 (491)
121 3r9u_A Thioredoxin reductase; 98.9 1.1E-08 3.7E-13 94.5 11.3 36 70-105 3-39 (315)
122 3cty_A Thioredoxin reductase; 98.9 1.1E-08 3.6E-13 94.9 11.0 35 70-104 15-49 (319)
123 2vvm_A Monoamine oxidase N; FA 98.8 8.1E-08 2.8E-12 94.7 17.3 57 232-296 255-312 (495)
124 2ivd_A PPO, PPOX, protoporphyr 98.8 3.4E-08 1.2E-12 96.9 14.5 39 69-107 14-53 (478)
125 3dk9_A Grase, GR, glutathione 98.8 1.5E-07 5.3E-12 92.2 18.9 74 232-306 228-306 (478)
126 4gut_A Lysine-specific histone 98.8 5.7E-08 2E-12 99.9 16.4 38 70-107 335-372 (776)
127 2a87_A TRXR, TR, thioredoxin r 98.8 2.3E-08 7.9E-13 93.3 11.9 36 69-104 12-47 (335)
128 3lxd_A FAD-dependent pyridine 98.8 8.8E-08 3E-12 92.1 15.9 70 231-307 193-263 (415)
129 1trb_A Thioredoxin reductase; 98.8 1.4E-08 4.8E-13 94.0 9.8 35 70-104 4-38 (320)
130 3kkj_A Amine oxidase, flavin-c 98.8 3.6E-09 1.2E-13 95.9 5.6 34 71-104 2-35 (336)
131 3lad_A Dihydrolipoamide dehydr 98.8 6.3E-08 2.1E-12 94.9 14.7 35 70-104 2-36 (476)
132 3dgz_A Thioredoxin reductase 2 98.8 2.6E-07 8.8E-12 90.8 18.8 63 232-296 225-287 (488)
133 3qfa_A Thioredoxin reductase 1 98.8 1.5E-07 5.1E-12 93.1 16.3 36 69-104 30-65 (519)
134 4b1b_A TRXR, thioredoxin reduc 98.7 1.8E-07 6E-12 92.5 16.0 36 69-104 40-75 (542)
135 2a8x_A Dihydrolipoyl dehydroge 98.7 3.6E-08 1.2E-12 96.3 10.9 34 71-104 3-36 (464)
136 1fl2_A Alkyl hydroperoxide red 98.7 4E-08 1.4E-12 90.5 10.5 59 232-296 56-115 (310)
137 1zk7_A HGII, reductase, mercur 98.7 5.7E-07 1.9E-11 87.9 18.7 58 231-297 215-272 (467)
138 1hyu_A AHPF, alkyl hydroperoxi 98.7 9.1E-08 3.1E-12 94.7 12.5 36 68-103 209-244 (521)
139 4b63_A L-ornithine N5 monooxyg 98.7 3.3E-07 1.1E-11 90.1 16.2 63 232-294 145-212 (501)
140 3l8k_A Dihydrolipoyl dehydroge 98.7 8.3E-08 2.8E-12 93.7 11.3 34 71-104 4-37 (466)
141 1fec_A Trypanothione reductase 98.7 1.9E-07 6.6E-12 91.7 13.8 68 232-306 231-301 (490)
142 1ojt_A Surface protein; redox- 98.7 1.3E-07 4.3E-12 92.8 12.2 34 71-104 6-39 (482)
143 3k30_A Histamine dehydrogenase 98.7 2.1E-07 7.2E-12 95.4 14.2 62 233-301 568-630 (690)
144 1v59_A Dihydrolipoamide dehydr 98.7 8.4E-08 2.9E-12 94.1 10.9 34 71-104 5-38 (478)
145 2hqm_A GR, grase, glutathione 98.6 1.9E-07 6.4E-12 91.5 12.7 36 70-105 10-45 (479)
146 3iwa_A FAD-dependent pyridine 98.6 9.6E-08 3.3E-12 93.5 10.6 34 71-104 3-38 (472)
147 1dxl_A Dihydrolipoamide dehydr 98.6 2E-07 6.9E-12 91.2 12.6 36 69-104 4-39 (470)
148 2qae_A Lipoamide, dihydrolipoy 98.6 2.5E-07 8.5E-12 90.5 13.0 34 71-104 2-35 (468)
149 3ics_A Coenzyme A-disulfide re 98.6 1.6E-07 5.4E-12 94.6 11.2 36 69-104 34-71 (588)
150 1ebd_A E3BD, dihydrolipoamide 98.6 2.7E-07 9.1E-12 89.9 12.2 35 71-105 3-37 (455)
151 3kd9_A Coenzyme A disulfide re 98.6 1.5E-07 5.1E-12 91.5 9.6 35 70-104 2-38 (449)
152 1xdi_A RV3303C-LPDA; reductase 98.6 3.1E-07 1.1E-11 90.5 12.0 35 71-105 2-39 (499)
153 3oc4_A Oxidoreductase, pyridin 98.6 1.8E-07 6.3E-12 90.9 10.0 33 72-104 3-37 (452)
154 2cdu_A NADPH oxidase; flavoenz 98.5 2.5E-07 8.6E-12 90.0 10.5 33 72-104 1-35 (452)
155 3h8l_A NADH oxidase; membrane 98.5 6.7E-08 2.3E-12 92.8 5.6 33 72-104 2-37 (409)
156 2bc0_A NADH oxidase; flavoprot 98.5 1.4E-07 4.9E-12 92.7 8.0 36 69-104 33-71 (490)
157 3fpz_A Thiazole biosynthetic e 98.5 6.8E-08 2.3E-12 89.7 5.3 38 68-105 62-101 (326)
158 1nhp_A NADH peroxidase; oxidor 98.5 3.5E-07 1.2E-11 88.8 10.4 33 72-104 1-35 (447)
159 3ntd_A FAD-dependent pyridine 98.5 3.9E-07 1.3E-11 91.3 10.5 33 72-104 2-36 (565)
160 3klj_A NAD(FAD)-dependent dehy 98.5 1.4E-07 4.8E-12 89.5 6.7 36 69-104 7-42 (385)
161 2wpf_A Trypanothione reductase 98.5 7.3E-07 2.5E-11 87.6 12.0 32 71-102 7-39 (495)
162 1zmd_A Dihydrolipoyl dehydroge 98.5 5.4E-07 1.8E-11 88.2 11.0 36 69-104 4-39 (474)
163 3cgb_A Pyridine nucleotide-dis 98.5 4.7E-07 1.6E-11 88.7 10.5 33 72-104 37-71 (480)
164 2eq6_A Pyruvate dehydrogenase 98.5 7.8E-07 2.7E-11 86.7 11.5 35 71-105 6-40 (464)
165 1xhc_A NADH oxidase /nitrite r 98.4 1.8E-07 6E-12 88.3 5.9 33 71-104 8-40 (367)
166 1q1r_A Putidaredoxin reductase 98.4 3.7E-07 1.3E-11 88.1 8.1 35 70-104 3-39 (431)
167 1y56_A Hypothetical protein PH 98.4 6.3E-07 2.2E-11 88.0 8.8 34 70-104 107-140 (493)
168 2v3a_A Rubredoxin reductase; a 98.3 1.2E-06 4.1E-11 83.2 9.4 34 71-104 4-39 (384)
169 3sx6_A Sulfide-quinone reducta 98.3 1.7E-07 5.9E-12 90.7 3.5 33 72-104 5-40 (437)
170 3fg2_P Putative rubredoxin red 98.3 5E-06 1.7E-10 79.5 13.6 66 235-307 187-253 (404)
171 2gag_A Heterotetrameric sarcos 98.3 2.2E-06 7.4E-11 90.9 12.0 35 70-104 127-161 (965)
172 2x8g_A Thioredoxin glutathione 98.3 8.8E-06 3E-10 82.0 15.8 35 69-103 105-139 (598)
173 1rsg_A FMS1 protein; FAD bindi 98.3 2.6E-07 8.9E-12 91.5 4.0 39 69-107 6-46 (516)
174 3ef6_A Toluene 1,2-dioxygenase 98.3 7.3E-07 2.5E-11 85.5 6.8 33 72-104 3-37 (410)
175 2e1m_A L-glutamate oxidase; L- 98.3 6E-07 2E-11 84.2 5.9 39 69-107 42-82 (376)
176 2jae_A L-amino acid oxidase; o 98.3 6.4E-07 2.2E-11 88.1 6.4 40 69-108 9-48 (489)
177 2b9w_A Putative aminooxidase; 98.3 6.8E-07 2.3E-11 86.1 6.3 39 69-107 4-44 (424)
178 3hdq_A UDP-galactopyranose mut 98.3 5.5E-07 1.9E-11 85.2 5.3 39 69-107 27-66 (397)
179 1v59_A Dihydrolipoamide dehydr 98.3 1E-05 3.6E-10 79.1 14.6 69 237-306 229-300 (478)
180 3fg2_P Putative rubredoxin red 98.3 9.1E-07 3.1E-11 84.7 6.6 33 72-104 2-36 (404)
181 1v0j_A UDP-galactopyranose mut 98.3 6E-07 2E-11 85.7 5.2 39 70-108 6-46 (399)
182 2v3a_A Rubredoxin reductase; a 98.3 7.5E-06 2.6E-10 77.7 12.9 63 236-306 191-254 (384)
183 4eqs_A Coenzyme A disulfide re 98.3 2.9E-06 1E-10 81.9 9.9 48 243-295 68-115 (437)
184 1trb_A Thioredoxin reductase; 98.2 1.3E-05 4.5E-10 73.8 13.8 57 238-296 190-247 (320)
185 1s3e_A Amine oxidase [flavin-c 98.2 7.6E-07 2.6E-11 88.2 5.6 35 71-105 4-38 (520)
186 2yg5_A Putrescine oxidase; oxi 98.2 5.4E-07 1.8E-11 87.7 4.2 38 70-107 4-42 (453)
187 3ihm_A Styrene monooxygenase A 98.2 6.5E-07 2.2E-11 86.4 4.7 35 70-104 21-55 (430)
188 1q1r_A Putidaredoxin reductase 98.2 1.5E-05 5.2E-10 76.7 13.9 63 237-306 196-261 (431)
189 3hyw_A Sulfide-quinone reducta 98.2 5.2E-05 1.8E-09 73.0 16.8 64 234-305 202-265 (430)
190 1i8t_A UDP-galactopyranose mut 98.2 9.2E-07 3.1E-11 83.4 4.1 36 72-107 2-38 (367)
191 3ef6_A Toluene 1,2-dioxygenase 98.2 1E-05 3.5E-10 77.4 11.1 64 236-307 189-253 (410)
192 1sez_A Protoporphyrinogen oxid 98.1 1.6E-06 5.5E-11 85.5 5.4 37 71-107 13-49 (504)
193 2bi7_A UDP-galactopyranose mut 98.1 1.8E-06 6.2E-11 81.9 5.4 36 70-105 2-37 (384)
194 3cty_A Thioredoxin reductase; 98.1 2.5E-05 8.5E-10 71.9 13.0 61 243-305 201-262 (319)
195 3ic9_A Dihydrolipoamide dehydr 98.1 9.4E-07 3.2E-11 86.8 3.3 60 232-296 215-274 (492)
196 4dsg_A UDP-galactopyranose mut 98.1 3E-06 1E-10 83.0 5.9 39 69-107 7-47 (484)
197 2eq6_A Pyruvate dehydrogenase 98.1 5.9E-05 2E-09 73.4 15.0 67 237-306 215-284 (464)
198 3ab1_A Ferredoxin--NADP reduct 98.1 3.8E-05 1.3E-09 72.1 12.8 62 242-306 212-274 (360)
199 1onf_A GR, grase, glutathione 98.0 2.8E-06 9.7E-11 83.6 5.0 60 232-297 217-276 (500)
200 1zmd_A Dihydrolipoyl dehydroge 98.0 7.6E-05 2.6E-09 72.8 15.1 68 237-306 225-295 (474)
201 1fl2_A Alkyl hydroperoxide red 98.0 7.6E-05 2.6E-09 68.3 14.3 50 245-296 193-242 (310)
202 2hqm_A GR, grase, glutathione 98.0 5.4E-05 1.8E-09 74.0 13.9 65 237-306 231-297 (479)
203 3cgb_A Pyridine nucleotide-dis 98.0 4.1E-05 1.4E-09 74.9 13.0 62 236-306 231-293 (480)
204 2r9z_A Glutathione amide reduc 98.0 2.9E-06 9.8E-11 82.7 4.8 68 232-306 207-277 (463)
205 1ebd_A E3BD, dihydrolipoamide 98.0 8.4E-05 2.9E-09 72.1 15.2 55 237-296 216-270 (455)
206 2zbw_A Thioredoxin reductase; 98.0 6.1E-05 2.1E-09 69.8 13.6 64 240-306 199-263 (335)
207 2iid_A L-amino-acid oxidase; f 98.0 3.4E-06 1.2E-10 83.0 5.2 35 70-104 32-66 (498)
208 3itj_A Thioredoxin reductase 1 98.0 5.6E-05 1.9E-09 70.0 13.3 50 245-296 222-271 (338)
209 1nhp_A NADH peroxidase; oxidor 98.0 3.9E-05 1.3E-09 74.3 12.6 35 70-104 148-182 (447)
210 3g5s_A Methylenetetrahydrofola 98.0 4.5E-06 1.6E-10 77.3 5.4 33 72-104 2-34 (443)
211 2yqu_A 2-oxoglutarate dehydrog 98.0 5.8E-05 2E-09 73.3 13.3 34 71-104 167-200 (455)
212 1ges_A Glutathione reductase; 98.0 2.7E-06 9.1E-11 82.6 3.8 68 232-306 208-278 (450)
213 1ges_A Glutathione reductase; 98.0 6.5E-05 2.2E-09 72.8 13.5 34 71-104 167-200 (450)
214 3c4a_A Probable tryptophan hyd 98.0 3.4E-06 1.2E-10 80.0 4.4 51 228-297 94-144 (381)
215 2r9z_A Glutathione amide reduc 98.0 8E-05 2.7E-09 72.4 13.8 34 71-104 166-199 (463)
216 2vdc_G Glutamate synthase [NAD 98.0 6.8E-06 2.3E-10 79.6 5.8 36 70-105 121-156 (456)
217 3iwa_A FAD-dependent pyridine 97.9 6.3E-05 2.1E-09 73.4 12.4 65 235-307 205-270 (472)
218 1lvl_A Dihydrolipoamide dehydr 97.9 4.4E-06 1.5E-10 81.2 3.9 57 232-296 212-268 (458)
219 3s5w_A L-ornithine 5-monooxyge 97.9 7.3E-05 2.5E-09 72.8 12.4 50 245-297 329-378 (463)
220 2gqw_A Ferredoxin reductase; f 97.9 0.00011 3.8E-09 70.2 13.4 59 236-306 191-250 (408)
221 1dxl_A Dihydrolipoamide dehydr 97.9 9.3E-05 3.2E-09 72.1 13.1 58 237-297 223-280 (470)
222 2yqu_A 2-oxoglutarate dehydrog 97.9 5.9E-06 2E-10 80.3 4.5 58 232-297 208-265 (455)
223 1xdi_A RV3303C-LPDA; reductase 97.9 0.00011 3.6E-09 72.3 13.5 63 236-306 227-292 (499)
224 2qae_A Lipoamide, dihydrolipoy 97.9 0.00019 6.4E-09 69.9 15.0 66 237-306 220-289 (468)
225 3f8d_A Thioredoxin reductase ( 97.9 0.00021 7.2E-09 65.6 14.4 59 245-306 203-262 (323)
226 1b37_A Protein (polyamine oxid 97.9 1E-05 3.5E-10 79.1 5.6 35 70-104 3-38 (472)
227 1onf_A GR, grase, glutathione 97.9 0.00013 4.5E-09 71.7 13.5 34 71-104 176-209 (500)
228 2wpf_A Trypanothione reductase 97.9 0.00011 3.7E-09 72.1 12.8 63 237-306 240-305 (495)
229 2a8x_A Dihydrolipoyl dehydroge 97.9 0.00021 7.1E-09 69.5 14.8 65 237-306 217-284 (464)
230 2q0l_A TRXR, thioredoxin reduc 97.9 0.00027 9.3E-09 64.6 14.6 57 245-303 192-249 (311)
231 2cdu_A NADPH oxidase; flavoenz 97.8 0.00012 4.1E-09 70.9 12.5 53 236-296 195-247 (452)
232 1lvl_A Dihydrolipoamide dehydr 97.8 7.1E-05 2.4E-09 72.7 10.8 34 71-104 171-204 (458)
233 2q7v_A Thioredoxin reductase; 97.8 0.00024 8.3E-09 65.4 13.9 49 245-296 201-249 (325)
234 3ic9_A Dihydrolipoamide dehydr 97.8 0.00028 9.7E-09 69.1 14.7 34 71-104 174-207 (492)
235 1ojt_A Surface protein; redox- 97.8 9.6E-05 3.3E-09 72.3 11.2 34 71-104 185-218 (482)
236 3oc4_A Oxidoreductase, pyridin 97.8 0.00019 6.5E-09 69.5 13.2 52 236-296 193-244 (452)
237 1o94_A Tmadh, trimethylamine d 97.8 2E-05 7E-10 81.0 6.3 37 69-105 387-423 (729)
238 3ntd_A FAD-dependent pyridine 97.8 0.0003 1E-08 70.3 14.6 34 71-104 151-184 (565)
239 2z3y_A Lysine-specific histone 97.8 2E-05 6.9E-10 80.2 5.9 37 69-105 105-141 (662)
240 2xag_A Lysine-specific histone 97.8 2.3E-05 8E-10 81.2 6.2 36 70-105 277-312 (852)
241 3lad_A Dihydrolipoamide dehydr 97.8 0.00035 1.2E-08 68.1 14.4 56 236-296 225-280 (476)
242 2bc0_A NADH oxidase; flavoprot 97.8 0.00017 5.8E-09 70.6 12.0 34 71-104 194-227 (490)
243 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00032 1.1E-08 69.2 13.7 49 245-295 404-452 (521)
244 1ps9_A 2,4-dienoyl-COA reducta 97.7 2.8E-05 9.5E-10 79.4 6.1 36 70-105 372-407 (671)
245 3h28_A Sulfide-quinone reducta 97.7 2.4E-05 8.4E-10 75.3 5.3 61 234-302 202-262 (430)
246 1vdc_A NTR, NADPH dependent th 97.7 0.00046 1.6E-08 63.7 13.7 54 243-296 206-259 (333)
247 3qfa_A Thioredoxin reductase 1 97.7 0.0008 2.7E-08 66.3 15.5 32 72-103 211-242 (519)
248 1m6i_A Programmed cell death p 97.7 0.00028 9.4E-09 69.2 12.0 62 237-306 231-293 (493)
249 3r9u_A Thioredoxin reductase; 97.7 0.0004 1.4E-08 63.5 12.3 51 243-296 194-244 (315)
250 2gqw_A Ferredoxin reductase; f 97.6 3.7E-05 1.3E-09 73.5 5.0 35 70-104 6-42 (408)
251 3ics_A Coenzyme A-disulfide re 97.6 0.00035 1.2E-08 70.1 12.3 61 236-306 232-293 (588)
252 1xhc_A NADH oxidase /nitrite r 97.6 0.00025 8.5E-09 66.6 10.3 33 72-104 144-176 (367)
253 3lzw_A Ferredoxin--NADP reduct 97.6 0.00056 1.9E-08 63.0 12.5 62 242-306 199-261 (332)
254 1lqt_A FPRA; NADP+ derivative, 97.6 3.7E-05 1.3E-09 74.5 4.5 35 70-104 2-43 (456)
255 2x8g_A Thioredoxin glutathione 97.6 0.0015 5.2E-08 65.6 15.9 32 72-103 287-318 (598)
256 1m6i_A Programmed cell death p 97.5 4.5E-05 1.5E-09 74.8 4.2 36 69-104 9-46 (493)
257 1gte_A Dihydropyrimidine dehyd 97.5 5.8E-05 2E-09 80.6 5.3 65 240-306 378-455 (1025)
258 3kd9_A Coenzyme A disulfide re 97.5 0.0005 1.7E-08 66.5 11.3 34 71-104 148-181 (449)
259 4b1b_A TRXR, thioredoxin reduc 97.5 0.0011 3.8E-08 65.3 13.8 34 70-103 222-255 (542)
260 1cjc_A Protein (adrenodoxin re 97.5 8.1E-05 2.8E-09 72.2 5.2 36 70-105 5-42 (460)
261 2a87_A TRXR, TR, thioredoxin r 97.5 0.00038 1.3E-08 64.4 9.5 50 244-296 203-252 (335)
262 1cjc_A Protein (adrenodoxin re 97.5 0.0013 4.6E-08 63.6 13.4 53 245-298 270-335 (460)
263 4g6h_A Rotenone-insensitive NA 97.4 0.00049 1.7E-08 67.5 9.7 61 233-299 273-335 (502)
264 2vdc_G Glutamate synthase [NAD 97.4 0.00024 8.2E-09 68.7 7.0 33 72-104 265-298 (456)
265 3ayj_A Pro-enzyme of L-phenyla 97.4 6.1E-05 2.1E-09 76.1 2.8 33 72-104 57-97 (721)
266 1vg0_A RAB proteins geranylger 97.4 0.00017 5.8E-09 72.0 5.7 56 232-293 378-434 (650)
267 4eqs_A Coenzyme A disulfide re 97.3 0.00094 3.2E-08 64.3 10.6 34 71-104 147-180 (437)
268 1gte_A Dihydropyrimidine dehyd 97.3 0.0019 6.5E-08 69.0 13.6 33 72-104 333-366 (1025)
269 1lqt_A FPRA; NADP+ derivative, 97.3 0.0015 5.3E-08 63.1 11.0 61 235-298 249-328 (456)
270 3l8k_A Dihydrolipoyl dehydroge 97.2 0.0017 5.8E-08 63.1 11.3 34 71-104 172-205 (466)
271 2pq4_B Periplasmic nitrate red 97.2 0.00011 3.6E-09 42.2 1.5 18 1-18 3-20 (35)
272 4g6h_A Rotenone-insensitive NA 97.2 0.00018 6.2E-09 70.5 4.0 35 70-104 41-75 (502)
273 4a5l_A Thioredoxin reductase; 97.2 0.0047 1.6E-07 56.2 13.3 33 72-104 153-185 (314)
274 3vrd_B FCCB subunit, flavocyto 97.0 0.00041 1.4E-08 66.0 4.5 57 242-306 212-268 (401)
275 2gag_A Heterotetrameric sarcos 97.0 0.0023 7.7E-08 67.9 10.3 60 243-303 327-391 (965)
276 3d1c_A Flavin-containing putat 97.0 0.0042 1.4E-07 58.0 10.8 33 72-104 167-199 (369)
277 3uox_A Otemo; baeyer-villiger 96.8 0.002 6.8E-08 63.8 7.3 33 72-104 186-218 (545)
278 3fwz_A Inner membrane protein 96.6 0.0031 1.1E-07 50.0 5.7 37 68-104 4-40 (140)
279 1o94_A Tmadh, trimethylamine d 96.3 0.012 4E-07 60.5 9.6 33 72-104 529-563 (729)
280 2g1u_A Hypothetical protein TM 96.1 0.0076 2.6E-07 48.6 5.5 34 71-104 19-52 (155)
281 3llv_A Exopolyphosphatase-rela 96.0 0.0085 2.9E-07 47.4 5.1 32 72-103 7-38 (141)
282 1lss_A TRK system potassium up 96.0 0.0088 3E-07 47.0 5.2 32 72-103 5-36 (140)
283 1id1_A Putative potassium chan 95.9 0.011 3.6E-07 47.6 5.7 33 71-103 3-35 (153)
284 3ic5_A Putative saccharopine d 95.8 0.0092 3.1E-07 45.3 4.6 32 72-103 6-38 (118)
285 3klj_A NAD(FAD)-dependent dehy 95.6 0.009 3.1E-07 56.3 4.5 33 72-104 147-179 (385)
286 4gcm_A TRXR, thioredoxin reduc 95.6 0.0088 3E-07 54.4 4.2 33 72-104 146-178 (312)
287 1ps9_A 2,4-dienoyl-COA reducta 95.5 0.062 2.1E-06 54.6 10.6 51 237-296 578-628 (671)
288 3ado_A Lambda-crystallin; L-gu 95.4 0.015 5E-07 52.9 4.9 33 72-104 7-39 (319)
289 1vg0_A RAB proteins geranylger 95.3 0.058 2E-06 53.9 9.2 36 70-105 7-42 (650)
290 1f0y_A HCDH, L-3-hydroxyacyl-C 95.2 0.023 7.8E-07 51.5 5.6 32 72-103 16-47 (302)
291 2hmt_A YUAA protein; RCK, KTN, 95.2 0.02 6.7E-07 45.2 4.5 32 72-103 7-38 (144)
292 3c85_A Putative glutathione-re 95.1 0.026 9E-07 46.8 5.2 34 71-104 39-73 (183)
293 3vtf_A UDP-glucose 6-dehydroge 94.9 0.024 8.1E-07 53.9 4.9 34 70-103 20-53 (444)
294 4fk1_A Putative thioredoxin re 94.9 0.074 2.5E-06 48.0 8.1 33 71-103 146-179 (304)
295 2dpo_A L-gulonate 3-dehydrogen 94.9 0.026 8.8E-07 51.5 4.9 33 72-104 7-39 (319)
296 4e12_A Diketoreductase; oxidor 94.8 0.034 1.1E-06 49.9 5.4 32 72-103 5-36 (283)
297 3i83_A 2-dehydropantoate 2-red 94.6 0.033 1.1E-06 50.9 5.1 32 72-103 3-34 (320)
298 3k6j_A Protein F01G10.3, confi 94.5 0.021 7.3E-07 54.5 3.6 33 72-104 55-87 (460)
299 3dfz_A SIRC, precorrin-2 dehyd 94.5 0.03 1E-06 47.9 4.1 33 71-103 31-63 (223)
300 3hn2_A 2-dehydropantoate 2-red 94.5 0.033 1.1E-06 50.7 4.7 32 72-103 3-34 (312)
301 1kyq_A Met8P, siroheme biosynt 94.4 0.022 7.6E-07 50.4 3.2 33 71-103 13-45 (274)
302 3ghy_A Ketopantoate reductase 94.4 0.044 1.5E-06 50.4 5.3 32 72-103 4-35 (335)
303 3l4b_C TRKA K+ channel protien 94.3 0.038 1.3E-06 47.3 4.5 32 73-104 2-33 (218)
304 4a7p_A UDP-glucose dehydrogena 94.3 0.047 1.6E-06 52.2 5.3 35 70-104 7-41 (446)
305 2y0c_A BCEC, UDP-glucose dehyd 94.3 0.043 1.5E-06 53.1 5.2 33 71-103 8-40 (478)
306 1pzg_A LDH, lactate dehydrogen 94.2 0.047 1.6E-06 50.1 5.1 34 71-104 9-43 (331)
307 3k96_A Glycerol-3-phosphate de 94.1 0.051 1.7E-06 50.4 5.2 34 70-103 28-61 (356)
308 2raf_A Putative dinucleotide-b 94.0 0.061 2.1E-06 45.7 5.1 33 72-104 20-52 (209)
309 1lld_A L-lactate dehydrogenase 94.0 0.057 2E-06 49.2 5.2 32 72-103 8-41 (319)
310 3gg2_A Sugar dehydrogenase, UD 93.9 0.056 1.9E-06 51.8 5.2 33 72-104 3-35 (450)
311 4dio_A NAD(P) transhydrogenase 93.9 0.067 2.3E-06 50.0 5.4 34 71-104 190-223 (405)
312 3g79_A NDP-N-acetyl-D-galactos 93.9 0.06 2E-06 51.8 5.2 33 72-104 19-53 (478)
313 1ks9_A KPA reductase;, 2-dehyd 93.8 0.065 2.2E-06 48.0 5.1 32 73-104 2-33 (291)
314 1z82_A Glycerol-3-phosphate de 93.8 0.065 2.2E-06 49.3 5.2 35 69-103 12-46 (335)
315 3g17_A Similar to 2-dehydropan 93.7 0.045 1.5E-06 49.3 3.9 32 72-103 3-34 (294)
316 3lk7_A UDP-N-acetylmuramoylala 93.6 0.074 2.5E-06 51.1 5.5 33 72-104 10-42 (451)
317 1zcj_A Peroxisomal bifunctiona 93.6 0.072 2.4E-06 51.4 5.3 33 72-104 38-70 (463)
318 2ew2_A 2-dehydropantoate 2-red 93.6 0.07 2.4E-06 48.4 5.0 32 72-103 4-35 (316)
319 1jw9_B Molybdopterin biosynthe 93.6 0.062 2.1E-06 47.1 4.4 34 72-105 32-66 (249)
320 1zej_A HBD-9, 3-hydroxyacyl-CO 93.5 0.07 2.4E-06 47.8 4.8 34 70-104 11-44 (293)
321 2hjr_A Malate dehydrogenase; m 93.5 0.086 2.9E-06 48.2 5.4 33 72-104 15-48 (328)
322 2xve_A Flavin-containing monoo 93.4 0.064 2.2E-06 51.8 4.7 33 72-104 198-230 (464)
323 1zk7_A HGII, reductase, mercur 93.4 0.072 2.4E-06 51.5 5.0 34 71-104 176-209 (467)
324 3p2y_A Alanine dehydrogenase/p 93.4 0.074 2.5E-06 49.3 4.7 34 71-104 184-217 (381)
325 3doj_A AT3G25530, dehydrogenas 93.3 0.096 3.3E-06 47.5 5.5 34 71-104 21-54 (310)
326 2a9f_A Putative malic enzyme ( 93.3 0.078 2.7E-06 49.1 4.8 35 70-104 187-222 (398)
327 3pid_A UDP-glucose 6-dehydroge 93.3 0.076 2.6E-06 50.3 4.8 34 70-104 35-68 (432)
328 3tl2_A Malate dehydrogenase; c 93.3 0.1 3.6E-06 47.3 5.6 34 70-103 7-41 (315)
329 2x5o_A UDP-N-acetylmuramoylala 93.3 0.066 2.2E-06 51.3 4.5 33 72-104 6-38 (439)
330 2v6b_A L-LDH, L-lactate dehydr 93.2 0.09 3.1E-06 47.6 5.0 31 73-103 2-34 (304)
331 1bg6_A N-(1-D-carboxylethyl)-L 93.2 0.091 3.1E-06 48.7 5.2 32 72-103 5-36 (359)
332 3dtt_A NADP oxidoreductase; st 93.1 0.11 3.7E-06 45.4 5.3 34 70-103 18-51 (245)
333 3ego_A Probable 2-dehydropanto 93.1 0.09 3.1E-06 47.6 5.0 31 72-103 3-33 (307)
334 1mv8_A GMD, GDP-mannose 6-dehy 93.1 0.076 2.6E-06 50.8 4.7 31 73-103 2-32 (436)
335 3g0o_A 3-hydroxyisobutyrate de 93.1 0.099 3.4E-06 47.3 5.2 33 71-103 7-39 (303)
336 3lxd_A FAD-dependent pyridine 93.1 0.091 3.1E-06 49.9 5.2 34 71-104 152-185 (415)
337 2ewd_A Lactate dehydrogenase,; 93.1 0.094 3.2E-06 47.8 5.0 33 72-104 5-38 (317)
338 3l9w_A Glutathione-regulated p 93.1 0.1 3.6E-06 49.3 5.4 34 71-104 4-37 (413)
339 3gwf_A Cyclohexanone monooxyge 93.0 0.068 2.3E-06 52.7 4.3 34 71-104 178-211 (540)
340 3hwr_A 2-dehydropantoate 2-red 93.0 0.099 3.4E-06 47.6 5.0 31 72-103 20-50 (318)
341 1nyt_A Shikimate 5-dehydrogena 93.0 0.1 3.5E-06 46.3 5.0 33 71-103 119-151 (271)
342 3urh_A Dihydrolipoyl dehydroge 93.0 0.075 2.6E-06 51.7 4.4 34 71-104 198-231 (491)
343 1vl6_A Malate oxidoreductase; 92.9 0.099 3.4E-06 48.3 4.8 36 69-104 190-226 (388)
344 3mog_A Probable 3-hydroxybutyr 92.9 0.11 3.8E-06 50.2 5.4 33 72-104 6-38 (483)
345 2gv8_A Monooxygenase; FMO, FAD 92.8 0.073 2.5E-06 51.1 4.1 34 71-104 212-246 (447)
346 1h6d_A Precursor form of gluco 92.8 0.05 1.7E-06 52.0 2.9 35 69-103 81-118 (433)
347 3dk9_A Grase, GR, glutathione 92.8 0.097 3.3E-06 50.7 5.0 34 71-104 187-220 (478)
348 3oj0_A Glutr, glutamyl-tRNA re 92.8 0.043 1.5E-06 43.4 2.0 33 71-103 21-53 (144)
349 1pjc_A Protein (L-alanine dehy 92.8 0.11 3.9E-06 48.2 5.1 32 72-103 168-199 (361)
350 4ap3_A Steroid monooxygenase; 92.7 0.08 2.7E-06 52.3 4.3 33 72-104 192-224 (549)
351 1x13_A NAD(P) transhydrogenase 92.7 0.11 3.7E-06 49.0 4.9 34 71-104 172-205 (401)
352 1t2d_A LDH-P, L-lactate dehydr 92.7 0.15 5E-06 46.6 5.6 33 72-104 5-38 (322)
353 3ojo_A CAP5O; rossmann fold, c 92.6 0.1 3.5E-06 49.5 4.7 33 72-104 12-44 (431)
354 3pef_A 6-phosphogluconate dehy 92.6 0.12 4.1E-06 46.3 4.9 32 73-104 3-34 (287)
355 3gvi_A Malate dehydrogenase; N 92.5 0.15 5.1E-06 46.4 5.5 36 69-104 5-41 (324)
356 2vns_A Metalloreductase steap3 92.5 0.15 5.3E-06 43.4 5.3 32 72-103 29-60 (215)
357 3dgz_A Thioredoxin reductase 2 92.4 0.12 4.1E-06 50.2 5.1 34 71-104 185-218 (488)
358 3l6d_A Putative oxidoreductase 92.4 0.17 5.8E-06 45.8 5.7 33 71-103 9-41 (306)
359 3qha_A Putative oxidoreductase 92.4 0.1 3.5E-06 47.0 4.2 33 72-104 16-48 (296)
360 1evy_A Glycerol-3-phosphate de 92.4 0.086 2.9E-06 49.1 3.8 31 73-103 17-47 (366)
361 2p4q_A 6-phosphogluconate dehy 92.3 0.15 5.2E-06 49.5 5.6 36 69-104 8-43 (497)
362 2eez_A Alanine dehydrogenase; 92.3 0.14 4.7E-06 47.7 5.1 32 72-103 167-198 (369)
363 1guz_A Malate dehydrogenase; o 92.2 0.15 5.1E-06 46.2 5.1 32 73-104 2-35 (310)
364 1fec_A Trypanothione reductase 92.2 0.11 3.8E-06 50.5 4.5 34 71-104 187-223 (490)
365 1txg_A Glycerol-3-phosphate de 92.2 0.11 3.8E-06 47.6 4.3 30 73-102 2-31 (335)
366 3eag_A UDP-N-acetylmuramate:L- 92.2 0.15 5E-06 46.7 5.0 33 72-104 5-38 (326)
367 1l7d_A Nicotinamide nucleotide 92.2 0.15 5.1E-06 47.8 5.1 34 71-104 172-205 (384)
368 3phh_A Shikimate dehydrogenase 92.1 0.17 5.7E-06 44.7 5.1 34 71-104 118-151 (269)
369 1vpd_A Tartronate semialdehyde 92.1 0.13 4.6E-06 46.2 4.7 32 72-103 6-37 (299)
370 1mo9_A ORF3; nucleotide bindin 92.1 0.13 4.6E-06 50.4 5.0 33 72-104 215-247 (523)
371 4dll_A 2-hydroxy-3-oxopropiona 92.1 0.15 5.2E-06 46.4 5.1 32 72-103 32-63 (320)
372 1ur5_A Malate dehydrogenase; o 92.1 0.17 6E-06 45.8 5.3 33 72-104 3-36 (309)
373 3h8v_A Ubiquitin-like modifier 91.9 0.13 4.6E-06 45.9 4.3 36 70-105 35-71 (292)
374 4g65_A TRK system potassium up 91.8 0.078 2.7E-06 51.0 2.9 32 73-104 5-36 (461)
375 3pdu_A 3-hydroxyisobutyrate de 91.8 0.12 4.1E-06 46.2 4.0 32 73-104 3-34 (287)
376 1dlj_A UDP-glucose dehydrogena 91.8 0.12 4E-06 48.9 4.0 30 73-103 2-31 (402)
377 1jay_A Coenzyme F420H2:NADP+ o 91.8 0.17 5.9E-06 42.8 4.8 31 73-103 2-33 (212)
378 4ezb_A Uncharacterized conserv 91.8 0.17 5.8E-06 46.0 5.0 33 72-104 25-58 (317)
379 3p7m_A Malate dehydrogenase; p 91.8 0.22 7.4E-06 45.3 5.6 35 70-104 4-39 (321)
380 4e21_A 6-phosphogluconate dehy 91.8 0.18 6.2E-06 46.7 5.2 32 72-103 23-54 (358)
381 2zyd_A 6-phosphogluconate dehy 91.8 0.14 4.9E-06 49.4 4.7 35 69-103 13-47 (480)
382 3rui_A Ubiquitin-like modifier 91.8 0.27 9.2E-06 44.8 6.2 35 71-105 34-69 (340)
383 2uyy_A N-PAC protein; long-cha 91.7 0.21 7.1E-06 45.4 5.5 33 72-104 31-63 (316)
384 1p77_A Shikimate 5-dehydrogena 91.7 0.13 4.6E-06 45.6 4.1 33 71-103 119-151 (272)
385 3e8x_A Putative NAD-dependent 91.7 0.18 6.3E-06 43.4 4.9 34 71-104 21-55 (236)
386 1a5z_A L-lactate dehydrogenase 91.7 0.15 5E-06 46.5 4.4 31 73-103 2-34 (319)
387 4huj_A Uncharacterized protein 91.7 0.099 3.4E-06 44.8 3.1 32 72-103 24-56 (220)
388 2qyt_A 2-dehydropantoate 2-red 91.6 0.11 3.8E-06 47.2 3.6 31 72-102 9-45 (317)
389 2h78_A Hibadh, 3-hydroxyisobut 91.6 0.16 5.6E-06 45.7 4.7 32 72-103 4-35 (302)
390 2vhw_A Alanine dehydrogenase; 91.6 0.19 6.4E-06 47.0 5.1 33 71-103 168-200 (377)
391 3ond_A Adenosylhomocysteinase; 91.6 0.18 6.1E-06 48.3 5.0 32 72-103 266-297 (488)
392 1y6j_A L-lactate dehydrogenase 91.6 0.22 7.4E-06 45.3 5.4 34 71-104 7-42 (318)
393 1edz_A 5,10-methylenetetrahydr 91.5 0.19 6.4E-06 45.4 4.8 34 70-103 176-210 (320)
394 4gwg_A 6-phosphogluconate dehy 91.5 0.2 6.9E-06 48.3 5.3 34 71-104 4-37 (484)
395 3dgh_A TRXR-1, thioredoxin red 91.5 0.18 6E-06 49.0 5.0 33 72-104 188-220 (483)
396 2o3j_A UDP-glucose 6-dehydroge 91.4 0.17 5.7E-06 49.1 4.7 32 72-103 10-43 (481)
397 1zud_1 Adenylyltransferase THI 91.4 0.22 7.4E-06 43.6 5.0 35 71-105 28-63 (251)
398 2egg_A AROE, shikimate 5-dehyd 91.4 0.19 6.3E-06 45.3 4.7 33 71-103 141-174 (297)
399 3ggo_A Prephenate dehydrogenas 91.3 0.25 8.7E-06 44.8 5.6 33 71-103 33-67 (314)
400 1y56_A Hypothetical protein PH 91.3 0.19 6.4E-06 48.9 4.9 59 240-306 265-324 (493)
401 2wtb_A MFP2, fatty acid multif 91.3 0.21 7.2E-06 51.0 5.4 33 72-104 313-345 (725)
402 1pjq_A CYSG, siroheme synthase 91.2 0.19 6.5E-06 48.3 4.9 32 72-103 13-44 (457)
403 1hyh_A L-hicdh, L-2-hydroxyiso 91.2 0.18 6E-06 45.8 4.4 31 73-103 3-35 (309)
404 3pqe_A L-LDH, L-lactate dehydr 91.2 0.22 7.5E-06 45.4 5.0 33 71-103 5-39 (326)
405 2f1k_A Prephenate dehydrogenas 91.1 0.23 7.9E-06 44.1 5.0 31 73-103 2-32 (279)
406 3ius_A Uncharacterized conserv 91.0 0.2 6.7E-06 44.6 4.5 33 72-104 6-38 (286)
407 3tnl_A Shikimate dehydrogenase 91.0 0.25 8.7E-06 44.6 5.1 33 71-103 154-187 (315)
408 1leh_A Leucine dehydrogenase; 90.9 0.24 8.1E-06 45.8 5.0 34 70-103 172-205 (364)
409 2pv7_A T-protein [includes: ch 90.9 0.27 9.1E-06 44.3 5.3 33 72-104 22-55 (298)
410 4gbj_A 6-phosphogluconate dehy 90.9 0.19 6.5E-06 45.2 4.3 33 72-104 6-38 (297)
411 3qsg_A NAD-binding phosphogluc 90.8 0.2 6.7E-06 45.5 4.3 32 72-103 25-57 (312)
412 3gpi_A NAD-dependent epimerase 90.8 0.32 1.1E-05 43.3 5.7 33 72-104 4-36 (286)
413 3o0h_A Glutathione reductase; 90.8 0.23 7.8E-06 48.2 5.0 34 71-104 191-224 (484)
414 2i6t_A Ubiquitin-conjugating e 90.7 0.23 7.7E-06 44.8 4.6 33 72-104 15-49 (303)
415 1a4i_A Methylenetetrahydrofola 90.7 0.3 1E-05 43.5 5.2 35 69-103 163-198 (301)
416 3u62_A Shikimate dehydrogenase 90.7 0.28 9.5E-06 42.9 5.0 31 73-103 110-141 (253)
417 4ffl_A PYLC; amino acid, biosy 90.7 0.27 9.2E-06 45.6 5.3 32 73-104 3-34 (363)
418 1yqg_A Pyrroline-5-carboxylate 90.6 0.22 7.6E-06 43.8 4.4 31 73-103 2-33 (263)
419 1oju_A MDH, malate dehydrogena 90.6 0.22 7.6E-06 44.6 4.4 31 73-103 2-34 (294)
420 4dna_A Probable glutathione re 90.6 0.24 8.3E-06 47.7 5.0 34 71-104 170-203 (463)
421 2iz1_A 6-phosphogluconate dehy 90.6 0.27 9.2E-06 47.5 5.3 33 71-103 5-37 (474)
422 3jyo_A Quinate/shikimate dehyd 90.5 0.28 9.7E-06 43.7 5.0 34 70-103 126-160 (283)
423 2pgd_A 6-phosphogluconate dehy 90.5 0.26 8.8E-06 47.7 5.1 33 72-104 3-35 (482)
424 3ktd_A Prephenate dehydrogenas 90.5 0.33 1.1E-05 44.5 5.5 33 72-104 9-41 (341)
425 1wdk_A Fatty oxidation complex 90.4 0.25 8.5E-06 50.3 5.1 33 72-104 315-347 (715)
426 3dfu_A Uncharacterized protein 90.4 0.11 3.6E-06 44.8 1.9 32 72-103 7-38 (232)
427 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.4 0.26 8.9E-06 47.6 5.0 31 73-103 3-33 (478)
428 2g5c_A Prephenate dehydrogenas 90.4 0.29 1E-05 43.5 5.0 31 73-103 3-35 (281)
429 1yj8_A Glycerol-3-phosphate de 90.4 0.17 6E-06 47.2 3.6 33 72-104 22-61 (375)
430 1nvt_A Shikimate 5'-dehydrogen 90.4 0.2 6.8E-06 44.9 3.9 32 71-103 128-159 (287)
431 3tri_A Pyrroline-5-carboxylate 90.3 0.35 1.2E-05 43.0 5.5 33 72-104 4-39 (280)
432 3ew7_A LMO0794 protein; Q8Y8U8 90.3 0.34 1.2E-05 41.0 5.3 30 74-103 3-33 (221)
433 3don_A Shikimate dehydrogenase 90.3 0.22 7.4E-06 44.2 4.0 34 71-104 117-151 (277)
434 3zwc_A Peroxisomal bifunctiona 90.3 0.23 8E-06 50.5 4.7 33 72-104 317-349 (742)
435 2gf2_A Hibadh, 3-hydroxyisobut 90.3 0.27 9.3E-06 44.0 4.8 32 73-104 2-33 (296)
436 2q3e_A UDP-glucose 6-dehydroge 90.3 0.24 8.3E-06 47.7 4.6 32 72-103 6-39 (467)
437 2hk9_A Shikimate dehydrogenase 90.2 0.25 8.6E-06 43.8 4.4 32 72-103 130-161 (275)
438 3ldh_A Lactate dehydrogenase; 90.2 0.26 8.7E-06 44.9 4.4 32 72-103 22-55 (330)
439 2rcy_A Pyrroline carboxylate r 90.1 0.27 9.2E-06 43.2 4.5 33 72-104 5-41 (262)
440 3c24_A Putative oxidoreductase 90.1 0.31 1.1E-05 43.5 4.9 32 72-103 12-44 (286)
441 3fbt_A Chorismate mutase and s 90.1 0.3 1E-05 43.4 4.8 33 71-103 122-155 (282)
442 3c7a_A Octopine dehydrogenase; 90.1 0.18 6.2E-06 47.6 3.5 29 73-101 4-33 (404)
443 3fbs_A Oxidoreductase; structu 90.0 0.19 6.4E-06 44.8 3.5 33 71-104 141-173 (297)
444 3h2s_A Putative NADH-flavin re 90.0 0.35 1.2E-05 41.1 5.1 30 74-103 3-33 (224)
445 1x0v_A GPD-C, GPDH-C, glycerol 90.0 0.16 5.6E-06 46.9 3.1 33 72-104 9-48 (354)
446 3h5n_A MCCB protein; ubiquitin 90.0 0.3 1E-05 45.0 4.9 35 71-105 118-153 (353)
447 3d4o_A Dipicolinate synthase s 90.0 0.34 1.2E-05 43.4 5.1 34 70-103 154-187 (293)
448 3pwz_A Shikimate dehydrogenase 90.0 0.35 1.2E-05 42.8 5.0 33 71-103 120-153 (272)
449 2rir_A Dipicolinate synthase, 90.0 0.34 1.2E-05 43.6 5.1 33 71-103 157-189 (300)
450 1b0a_A Protein (fold bifunctio 89.9 0.36 1.2E-05 42.6 5.0 35 69-103 157-192 (288)
451 3cky_A 2-hydroxymethyl glutara 89.8 0.32 1.1E-05 43.7 4.8 32 72-103 5-36 (301)
452 3ngx_A Bifunctional protein fo 89.8 0.31 1.1E-05 42.7 4.5 35 69-103 148-183 (276)
453 1b37_A Protein (polyamine oxid 89.8 0.44 1.5E-05 45.9 6.1 56 232-295 206-269 (472)
454 4aj2_A L-lactate dehydrogenase 89.8 0.4 1.4E-05 43.7 5.4 34 70-103 18-53 (331)
455 1lu9_A Methylene tetrahydromet 89.7 0.37 1.3E-05 43.1 5.1 33 71-103 119-152 (287)
456 3d0o_A L-LDH 1, L-lactate dehy 89.7 0.34 1.2E-05 44.0 4.9 35 69-103 4-40 (317)
457 3nep_X Malate dehydrogenase; h 89.7 0.31 1.1E-05 44.1 4.5 32 73-104 2-35 (314)
458 3o8q_A Shikimate 5-dehydrogena 89.7 0.35 1.2E-05 43.0 4.8 34 70-103 125-159 (281)
459 3vku_A L-LDH, L-lactate dehydr 89.6 0.35 1.2E-05 44.0 4.9 35 69-103 7-43 (326)
460 4gsl_A Ubiquitin-like modifier 89.6 0.38 1.3E-05 47.3 5.3 35 71-105 326-361 (615)
461 3fi9_A Malate dehydrogenase; s 89.6 0.37 1.3E-05 44.2 5.0 33 71-103 8-43 (343)
462 3t4e_A Quinate/shikimate dehyd 89.5 0.4 1.4E-05 43.3 5.1 33 71-103 148-181 (312)
463 2izz_A Pyrroline-5-carboxylate 89.5 0.37 1.3E-05 43.9 5.0 33 72-104 23-59 (322)
464 2d5c_A AROE, shikimate 5-dehyd 89.3 0.38 1.3E-05 42.3 4.9 31 73-103 118-148 (263)
465 3gt0_A Pyrroline-5-carboxylate 89.3 0.45 1.6E-05 41.4 5.3 32 72-103 3-38 (247)
466 4a9w_A Monooxygenase; baeyer-v 89.3 0.25 8.7E-06 45.3 3.9 32 72-104 164-195 (357)
467 2aef_A Calcium-gated potassium 89.3 0.15 5.2E-06 44.0 2.2 32 72-104 10-41 (234)
468 3vh1_A Ubiquitin-like modifier 89.3 0.49 1.7E-05 46.5 5.8 35 71-105 327-362 (598)
469 1i36_A Conserved hypothetical 89.3 0.32 1.1E-05 42.7 4.3 30 73-102 2-31 (264)
470 2cvz_A Dehydrogenase, 3-hydrox 89.3 0.3 1E-05 43.6 4.2 30 73-103 3-32 (289)
471 3r6d_A NAD-dependent epimerase 89.1 0.57 1.9E-05 39.8 5.7 31 73-103 7-39 (221)
472 4a26_A Putative C-1-tetrahydro 89.1 0.36 1.2E-05 43.0 4.4 35 69-103 163-198 (300)
473 1hdo_A Biliverdin IX beta redu 89.1 0.56 1.9E-05 39.0 5.6 33 72-104 4-37 (206)
474 3o38_A Short chain dehydrogena 88.9 0.32 1.1E-05 42.7 4.1 32 72-103 23-56 (266)
475 1ldn_A L-lactate dehydrogenase 88.9 0.44 1.5E-05 43.3 5.0 33 71-103 6-40 (316)
476 3ce6_A Adenosylhomocysteinase; 88.8 0.42 1.4E-05 46.1 5.0 34 70-103 273-306 (494)
477 1np3_A Ketol-acid reductoisome 88.7 0.44 1.5E-05 43.7 5.0 33 72-104 17-49 (338)
478 4a5o_A Bifunctional protein fo 88.7 0.44 1.5E-05 42.0 4.6 35 69-103 159-194 (286)
479 1tt5_B Ubiquitin-activating en 88.6 0.51 1.7E-05 44.8 5.4 35 71-105 40-75 (434)
480 2jae_A L-amino acid oxidase; o 88.6 1.1 3.8E-05 43.3 8.0 57 232-295 239-295 (489)
481 4aay_B AROB; oxidoreductase, r 88.4 0.088 3E-06 43.1 0.0 17 1-17 10-26 (175)
482 3d1l_A Putative NADP oxidoredu 88.4 0.39 1.3E-05 42.3 4.3 32 72-103 11-43 (266)
483 2dkn_A 3-alpha-hydroxysteroid 88.4 0.56 1.9E-05 40.7 5.3 32 73-104 3-35 (255)
484 3gvp_A Adenosylhomocysteinase 88.3 0.5 1.7E-05 44.4 5.0 33 71-103 220-252 (435)
485 3h28_A Sulfide-quinone reducta 88.3 0.77 2.6E-05 43.6 6.6 33 72-104 3-37 (430)
486 2qrj_A Saccharopine dehydrogen 88.3 0.47 1.6E-05 44.1 4.7 36 69-104 212-251 (394)
487 1y8q_A Ubiquitin-like 1 activa 88.3 0.57 2E-05 43.0 5.4 35 71-105 36-71 (346)
488 3p2o_A Bifunctional protein fo 88.2 0.6 2E-05 41.2 5.2 35 69-103 158-193 (285)
489 2dvm_A Malic enzyme, 439AA lon 88.2 0.56 1.9E-05 44.4 5.3 32 70-101 185-219 (439)
490 1npy_A Hypothetical shikimate 88.1 0.46 1.6E-05 42.0 4.5 33 71-103 119-152 (271)
491 1c1d_A L-phenylalanine dehydro 88.0 0.54 1.9E-05 43.2 5.0 34 70-103 174-207 (355)
492 1s3e_A Amine oxidase [flavin-c 88.0 0.87 3E-05 44.5 6.9 54 232-296 215-268 (520)
493 4gx0_A TRKA domain protein; me 87.9 0.52 1.8E-05 46.7 5.2 33 72-104 349-381 (565)
494 2d4a_B Malate dehydrogenase; a 87.7 0.47 1.6E-05 42.8 4.4 31 74-104 2-33 (308)
495 3h8l_A NADH oxidase; membrane 87.6 0.67 2.3E-05 43.6 5.6 60 232-303 218-277 (409)
496 1gpj_A Glutamyl-tRNA reductase 87.5 0.48 1.6E-05 44.7 4.4 33 71-103 167-200 (404)
497 3l07_A Bifunctional protein fo 87.4 0.71 2.4E-05 40.7 5.2 35 69-103 159-194 (285)
498 2dbq_A Glyoxylate reductase; D 87.3 0.65 2.2E-05 42.5 5.1 33 72-104 151-183 (334)
499 3c4a_A Probable tryptophan hyd 87.1 0.32 1.1E-05 45.4 3.0 32 73-104 2-35 (381)
500 2pd4_A Enoyl-[acyl-carrier-pro 87.1 0.6 2E-05 41.3 4.7 33 72-104 7-42 (275)
No 1
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=100.00 E-value=4.2e-44 Score=358.07 Aligned_cols=369 Identities=36% Similarity=0.550 Sum_probs=263.3
Q ss_pred ChHHHHHHHhhhcCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcc
Q 013476 55 SRVVQESALIAANNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYG 134 (442)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~ 134 (442)
.+......+. +.++||||||||++|+++|+.|+++|++|+||||+++++|+|+++.++++++.+++...
T Consensus 6 ~r~~~~~~m~----~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~------- 74 (561)
T 3da1_A 6 KRDKCIGEMS----EKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQF------- 74 (561)
T ss_dssp CHHHHHHHHT----TSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC---------------
T ss_pred HHHHHHHhcc----CCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHhc-------
Confidence 3444444444 56799999999999999999999999999999999999999999999999998876532
Q ss_pred hHHHHHHHHHHHHHHHHhCCcccccCCCcccCCchh--hHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccc
Q 013476 135 QLKLVFHALEERKQVIRNAPHLSNALPCMTPCFDWF--EVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMK 212 (442)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~ 212 (442)
....+.+.+.+........+++........+..... .......+..+++.+.........++++.++....+|.+
T Consensus 75 ~~~l~~e~~~e~~~l~~~ap~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l--- 151 (561)
T 3da1_A 75 EIKLVAEVGKERAIVYENAPHVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLL--- 151 (561)
T ss_dssp -------CHHHHHHHHHHCTTTCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTS---
T ss_pred CHHHHHHHHHHHHHHHHhCchhccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccC---
Confidence 123344445555555566666665544433332221 111122334455555432233457889999999999988
Q ss_pred cccCCceeEEEeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEcc
Q 013476 213 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 292 (442)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAt 292 (442)
......+++.+.++++++..++..|.+.++++|++|+++++|++|..++ + +|++|++.+..+|+...++||.||+|+
T Consensus 152 -~~~~~~gg~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g-~v~gV~~~d~~tg~~~~i~A~~VV~Aa 228 (561)
T 3da1_A 152 -RKENLKGGGIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-G-KVVGVVAKDRLTDTTHTIYAKKVVNAA 228 (561)
T ss_dssp -CCTTCCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-T-EEEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred -ChhhceeEEEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-C-eEEEEEEEEcCCCceEEEECCEEEECC
Confidence 5555677777778899999999999999999999999999999999987 5 899999987556766789999999999
Q ss_pred CCChHHHhhhhCCCCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEecCCcEEEccCCCCC-CCCCCCCCCH
Q 013476 293 GPFCDSVRKLADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDT-VITLLPEPHE 371 (442)
Q Consensus 293 G~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~g~~~~~~-~~~~~~~~~~ 371 (442)
|.|+..|++++|.....++.|.+|++++++....+....++++...+++.+|++|+.|.+++|+++++. ....++.+++
T Consensus 229 G~~s~~l~~~~g~~~~~~v~p~kG~~lvl~~~~~~~~~~~~~~~~~dgr~v~~iP~~g~~~iGtT~~~~~~~~~~~~~t~ 308 (561)
T 3da1_A 229 GPWVDTLREKDRSKHGKYLKLSKGVHLVVDQSRFPLRQAVYFDTESDGRMIFAIPREGKTYIGTTDTFYDKDIASPRMTV 308 (561)
T ss_dssp GGGHHHHHHTTTCCCSSEEEEEEEEEEEEEGGGSCCSSEEEECCSSSCCCEEEEEETTEEEECCCCEEECSCTTCCCCCH
T ss_pred CcchHHHHHhcCCCCCceEEeccEEEEEECCccCCCceEEEeccCCCCcEEEEEecCCCEEEcCCCCccCCCcCCCCCCH
Confidence 999999999998765567999999999987644444444555422578889999998899999998653 2345788999
Q ss_pred HHHHHHHHHhhhhcCCCCC--CCCeeeeeeeccccccCCCCCCCCCcccceeeEecCCCeEEEeccccccccC
Q 013476 372 DEIQFILDAISDYLNVKVR--RTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTITGGKWTTYRR 442 (442)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~--~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~~~~~~~~gg~~~~~~~ 442 (442)
+.++.+++.+.+++ |.+. ..++...|+|+||++.|+ .+++.+.+|+++|..+++|+|+++||||||||.
T Consensus 309 ~~i~~ll~~~~~~~-P~l~~~~~~v~~~~aGlRPl~~~~-~~~~~~~sR~~~i~~~~~gli~i~Ggk~Tt~r~ 379 (561)
T 3da1_A 309 EDRDYILAAANYMF-PSLRLTADDVESSWAGLRPLIHEE-GKKASEISRKDEIFFSDSGLISIAGGKLTGYRK 379 (561)
T ss_dssp HHHHHHHHHHHHHC-TTCCCCTTTEEEEEEEEEEEEEC------------CCEEECSSCCEEECCCCSTTHHH
T ss_pred HHHHHHHHHHHHhC-CCCCCChhhEEEEeEEeccccCCC-CCCccccccceEEEecCCCeEEEeCChhhhHHH
Confidence 99999999999999 7765 788999999999999885 345677889999888889999999999999983
No 2
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=100.00 E-value=6.7e-42 Score=342.85 Aligned_cols=357 Identities=35% Similarity=0.587 Sum_probs=264.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQV 149 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (442)
.++||+|||||++|+++|+.|+++|++|+||||+++++++|++++++++++.++.... ......+.+.+...+
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~-------~~~l~~~~~~e~~~l 103 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTF-------DVEVVADTVGERAVV 103 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGT-------CHHHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccccccccccchhhcc-------ChHHHHHHHHHHHHH
Confidence 5699999999999999999999999999999999999999999999999988775432 222334444444333
Q ss_pred HHhCCcccccCCCcccCCch-----hhHHHHHHHHHHHHHHhc--cCCCCcceecCHhhHHhhCCccccccccCCceeEE
Q 013476 150 IRNAPHLSNALPCMTPCFDW-----FEVVYYWVGLKMYDLVAG--RHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAV 222 (442)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 222 (442)
....+++......+.+.... +.......+...++++.. ..+.. .++++.++....+|.+ ..+...+++
T Consensus 104 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~e~~~~~P~l----~~~~~~gg~ 178 (571)
T 2rgh_A 104 QGIAPHIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYE-NYTLTPEEVLEREPFL----KKEGLKGAG 178 (571)
T ss_dssp HHHCTTSSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTC-CEEECHHHHHHHCTTS----CCTTEEEEE
T ss_pred HHhCcccccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCC-cEEECHHHHHHhCcCC----chhhceEEE
Confidence 34444443322222221110 222223334456666642 23433 7889999999999988 555567777
Q ss_pred EeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhh
Q 013476 223 VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKL 302 (442)
Q Consensus 223 ~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~ 302 (442)
++.++++++..++..+.+.++++|++|+++++|++|..++ + +|++|++++..+++...++||.||+|||.|+..++++
T Consensus 179 ~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~-~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~ 256 (571)
T 2rgh_A 179 VYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-D-QIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNL 256 (571)
T ss_dssp EECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-T-EEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTT
T ss_pred EecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-C-EEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHh
Confidence 7778899999999999999999999999999999999887 5 8999998764356656899999999999999999998
Q ss_pred hCCCCC-CcccCCCeeEEEeCCCCCCCCceEEeeec-CCCcEEEEEecCCcEEEccCCCCCC-CCCCCCCCHHHHHHHHH
Q 013476 303 ADQNVQ-PMICPSSGVHIVLPDYYSPEGMGLIVPKT-KDGRVVFMLPWLGRTVAGTTDSDTV-ITLLPEPHEDEIQFILD 379 (442)
Q Consensus 303 ~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~g~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~ 379 (442)
++.... .++.|++|++++++....+.....+++.. .+++.+|++|+.+.+++|++++... ...++.++++.++.+++
T Consensus 257 ~g~~~~~~~i~p~rG~~l~~~~~~~~~~~~~~~~~~~~dgr~~~~~P~~~~~~iG~t~~~~~~~~~~~~~~~~~~~~ll~ 336 (571)
T 2rgh_A 257 NFTRPVSPKMRPTKGIHLVVDAKKLPVPQPTYFDTGKQDGRMVFAIPRENKTYFGTTDTDYQGDFTDPKVTQEDVDYLLD 336 (571)
T ss_dssp CCSSCCCCCBCCEEEEEEEEEGGGSCCSSCEEEECSSSSSCEEEEEEETTEEEECCCCEECCSCSSSCCCCHHHHHHHHH
T ss_pred hccCccCceeeccceEEEEeccccCCCCcEEEEeccCCCCcEEEEEEcCCeEEEcCCCcCCCCCcCCCCCCHHHHHHHHH
Confidence 876543 56899999999987533222334444421 5778899999999999999876432 33467788999999999
Q ss_pred HhhhhcCCC--CCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecCCCeEEEeccccccccC
Q 013476 380 AISDYLNVK--VRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTITGGKWTTYRR 442 (442)
Q Consensus 380 ~~~~~~~~~--l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~~~~~~~~gg~~~~~~~ 442 (442)
.+.+++ |. +...++.+.|+|+||+++|+. .++...+|+++|..+.+|+|+++||||||||.
T Consensus 337 ~~~~~~-P~~~l~~~~v~~~waG~Rp~~~d~~-~~~~~~~r~~~i~~~~~gl~~v~GGk~Tt~r~ 399 (571)
T 2rgh_A 337 VINHRY-PEANITLADIEASWAGLRPLLIGNS-GSPSTISRGSSLEREPDGLLTLSGGKITDYRK 399 (571)
T ss_dssp HHHHHS-TTTCCCGGGCCEEEEEEECCBCC------------EEEEECTTSCEEEEECCGGGHHH
T ss_pred HHHHhc-CccCCchhceeEEeEEeeeccCCCC-CCcccCCCCcEEecCCCCeEEEeCcchhhHHH
Confidence 999999 65 467789999999999999853 23456789999987789999999999999983
No 3
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=100.00 E-value=3.5e-38 Score=312.40 Aligned_cols=347 Identities=31% Similarity=0.480 Sum_probs=254.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQV 149 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (442)
.++||+|||||++|+++|+.|+++|++|+||||.++++++|++++++++++.++.... ...+..+.+.++..+
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~-------~~~l~~~~~~~~~~l 74 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHY-------EFRLVSEALAEREVL 74 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGT-------CHHHHHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhc-------hHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999989999999999999888765431 223444445554444
Q ss_pred HHhCCcccccCCCcccCC-chhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhC--CccccccccCCceeEEEeeC
Q 013476 150 IRNAPHLSNALPCMTPCF-DWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELF--PTLAMKAKDRSLKGAVVYYD 226 (442)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~ 226 (442)
....+++........+.. ..+.......+...++.+ + ..++++.++....+ |.+ .. ...+++.+.+
T Consensus 75 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~l~~~~~~~~~~~P~l----~~-~~~~~~~~~~ 143 (501)
T 2qcu_A 75 LKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHL----G--KRTSLPGSTGLRFGANSVL----KP-EIKRGFEYSD 143 (501)
T ss_dssp HHHCTTTEEEEEEEEECCTTTSCHHHHHHHHHHHHSS----S--CCSSSCCCEEEECCTTSSB----CT-TCCEEEEEEE
T ss_pred HHhCCccccccCeEeccCcccchHHHHHHHHHHHHhc----C--CcEEECHHHHHHhhcCCCc----ch-hceEEEEeeC
Confidence 445555544332222221 111111222222333322 2 25667766666666 766 32 3556667778
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhh-hCC
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKL-ADQ 305 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~-~g~ 305 (442)
+++++..++..|.+.++++|++++++++|++|..++ ++++|++.+..+|+...++||.||+|+|.|+..+.+. ++.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~---~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~ 220 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARREN---GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHL 220 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCC
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC---CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccC
Confidence 899999999999999999999999999999999875 5677887653355556899999999999999988885 554
Q ss_pred CCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEecC-CcEEEccCCCCCC-CCCCCCCCHHHHHHHHHHhhh
Q 013476 306 NVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAGTTDSDTV-ITLLPEPHEDEIQFILDAISD 383 (442)
Q Consensus 306 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-g~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 383 (442)
....++.|.+|++++++... +....++++ ..+++.+|++|+. +.+++|.++.... .+.++.++++.++.+++.+.+
T Consensus 221 ~~~~~i~p~rG~~~~~~~~~-~~~~~~~~~-~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 298 (501)
T 2qcu_A 221 PSPYGIRLIKGSHIVVPRVH-TQKQAYILQ-NEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNT 298 (501)
T ss_dssp CCSSCBCCEEEEEEEEECSS-SCSCEEEEE-CTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHHHHHHHHHHH
T ss_pred CcccccccceeEEEEECCCC-CCceEEEee-cCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 32346999999999887433 223344454 5678889999986 6788998875432 234677889999999999999
Q ss_pred hcCC-CCCCCCeeeeeeeccccccCCCCCCCCCcccceeeE--ec--CCCeEEEecccccccc
Q 013476 384 YLNV-KVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVC--ED--FPGLVTITGGKWTTYR 441 (442)
Q Consensus 384 ~~~~-~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~--~~--~~~~~~~~gg~~~~~~ 441 (442)
++ | .+...++.+.|+|+||+++|+.. .....+++++|. .. .+|++.++|||+||||
T Consensus 299 ~~-p~~l~~~~v~~~~aG~Rp~~~d~~p-~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~ 359 (501)
T 2qcu_A 299 HF-KKQLSRDDIVWTYSGVRPLCDDESD-SPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYR 359 (501)
T ss_dssp HB-SSCCCGGGCCEEEEEEECCBCCCCS-SGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHH
T ss_pred hc-CCCCCcccEEEEEEEEeeecCCCCC-ccccCcCceEEEecccCCCCCeEEEeCccccchH
Confidence 99 7 78888899999999999999642 234556888887 32 3789999999999987
No 4
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=1.3e-32 Score=262.79 Aligned_cols=336 Identities=20% Similarity=0.205 Sum_probs=226.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCCCCccCCCCcccchhhhhHHhh-hccCcchHHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRYLEKAV-FNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~g~s~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 147 (442)
.++||+|||||++|+++|++|+++|++|+||||+. ++.++|+++.|.++.+..+..... ..+.....+. +.+..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 78 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHL----LYEYC 78 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHH----HHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHH----HHHHH
Confidence 35899999999999999999999999999999994 888999999988877654322100 0000011111 11111
Q ss_pred HHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEEEeeCc
Q 013476 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 227 (442)
...... + .....+............ ....+.. ...+++..++++.++....+|.+ ....+.+.+..+
T Consensus 79 ~~~~~~--~-~~~g~~~~~~~~~~~~~~---~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~------~~~~~~~~~~~~ 145 (369)
T 3dme_A 79 AARGVP--H-QRLGKLIVATSDAEASQL---DSIARRA-GANGVDDLQHIDGAAARRLEPAL------HCTAALVSPSTG 145 (369)
T ss_dssp HHHTCC--E-ECCCEEEEECSHHHHTTH---HHHHHHH-HHTTCCCCEEEEHHHHHHHCTTC------CCSEEEEETTCE
T ss_pred HHcCCC--c-ccCCEEEEecCHHHHHHH---HHHHHHH-HHcCCCceeecCHHHHHHhCCCc------eeeeeeECCCCE
Confidence 111111 1 111111111111110000 1222222 25566547888889888888876 233444556678
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhh-CCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA-DQN 306 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~-g~~ 306 (442)
.+++..++..|.+.++++|++|+++++|++|..++++ .+ .|.+ .+|+...+.||.||+|+|.|+..|++++ |++
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~-~v~~---~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEG-GF-ELDF---GGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-SE-EEEE---CTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCc-eE-EEEE---CCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 8999999999999999999999999999999998754 23 3444 3454468999999999999999999998 875
Q ss_pred C--CCcccCCCeeEEEeCCCCCCCCceEEeee-cCCCcEEEE-EecCCcEEEccCCCCCCCCCCCCCCHHHHHHHHHHhh
Q 013476 307 V--QPMICPSSGVHIVLPDYYSPEGMGLIVPK-TKDGRVVFM-LPWLGRTVAGTTDSDTVITLLPEPHEDEIQFILDAIS 382 (442)
Q Consensus 307 ~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~p~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (442)
. ..++.|.+|+++.++.... ... .++.. ..++..+++ .+.+|++++|++.+.. ...+..++++.++.+++.+.
T Consensus 221 ~~~~~~i~p~rG~~~~~~~~~~-~~~-~~~~~p~~~~~~~~~~~~~~g~~~iG~t~e~~-~~~~~~~~~~~~~~l~~~~~ 297 (369)
T 3dme_A 221 RDSIPPEYLCKGSYFTLAGRAP-FSR-LIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWI-ATEDYTLDPRRADVFYAAVR 297 (369)
T ss_dssp GGGSCCCEEEEEEEEECSSSCS-CSS-EEEECTTCSSCCCCEEECTTSCEEECCCCEEE-SSCCCCCCGGGGGGHHHHHH
T ss_pred ccccceeeecceEEEEECCCCc-cCc-eeecCCCCCCceEEEeCccCCcEEECCCcccc-cccccccCHHHHHHHHHHHH
Confidence 2 2468999999988876422 222 23321 223322334 4567899999987642 13566788888999999999
Q ss_pred hhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceee-Ee---cCCCeEEEeccc
Q 013476 383 DYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVV-CE---DFPGLVTITGGK 436 (442)
Q Consensus 383 ~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i-~~---~~~~~~~~~gg~ 436 (442)
+++ |.+...++.+.|+|+||+++|. +...++|+| .. ..+++|+++|..
T Consensus 298 ~~~-P~l~~~~v~~~w~G~Rp~~~~~-----~~~d~~p~i~g~~~~~~~~l~~~~G~~ 349 (369)
T 3dme_A 298 SYW-PALPDGALAPGYTGIRPKISGP-----HEPAADFAIAGPASHGVAGLVNLYGIE 349 (369)
T ss_dssp TTC-TTCCTTCCEEEEEEEEEESSCT-----TSCCCCCEEECHHHHCCTTEEEEECCC
T ss_pred HHC-CCCChhhceecceeccccccCC-----CCCcCCeEEecccccCCCCEEEEeCCC
Confidence 999 8899899999999999998642 123378888 33 358999999874
No 5
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.1e-31 Score=257.69 Aligned_cols=328 Identities=16% Similarity=0.183 Sum_probs=224.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQV 149 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (442)
.++||+|||||++|+++|++|+++|++|+||||..++.++|+++.|.++........ ..+..+....+..+
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~---------~~l~~~~~~~~~~l 74 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEAN---------VRVMKRSVELWKKY 74 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHH---------HHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHH---------HHHHHHHHHHHHHH
Confidence 358999999999999999999999999999999988888888888887654321110 11111111111111
Q ss_pred HHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeE-EEeeCcc
Q 013476 150 IRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGA-VVYYDGQ 228 (442)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~ 228 (442)
.............+............ ....+.+ +..+++ .++++.++....+|.+ ......++ +.+..+.
T Consensus 75 ~~~~~~~~~~~g~l~~~~~~~~~~~~---~~~~~~~-~~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~~~~~ 145 (382)
T 1y56_B 75 SEEYGFSFKQTGYLFLLYDDEEVKTF---KRNIEIQ-NKFGVP-TKLITPEEAKEIVPLL----DISEVIAASWNPTDGK 145 (382)
T ss_dssp HHHHTCCEECCCEEEEECSHHHHHHH---HHHHHHH-HHTTCC-CEEECHHHHHHSSTTC----CCTTCCEEEEETTCCE
T ss_pred HHHhCCCeeccceEEEEeCHHHHHHH---HHHHHHH-HhcCCC-cEEeCHHHHHHhCCCC----CcccceEEEEcCCCee
Confidence 11100011111111111111111111 1222222 255665 7889999988888877 43344444 4466889
Q ss_pred cChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCCC
Q 013476 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQ 308 (442)
Q Consensus 229 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~~ 308 (442)
+++..++..|.+.+++.|++|+++++|++|..++ + ++++|++. +| .++||.||+|+|.|+..|.+.+|....
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~-~v~gv~~~---~g---~i~a~~VV~A~G~~s~~l~~~~g~~~~ 217 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN-N-EIKGVKTN---KG---IIKTGIVVNATNAWANLINAMAGIKTK 217 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-S-BEEEEEET---TE---EEECSEEEECCGGGHHHHHHHHTCCSC
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC-C-EEEEEEEC---Cc---EEECCEEEECcchhHHHHHHHcCCCcC
Confidence 9999999999999999999999999999999887 4 77777652 22 799999999999999999998886521
Q ss_pred CcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEecCCcEEEcc-CCCCCCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 013476 309 PMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGT-TDSDTVITLLPEPHEDEIQFILDAISDYLNV 387 (442)
Q Consensus 309 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (442)
.++.|.+|+++.++........+.++. .+...+|++|..+++++|. .... ....+..++++..+.+++.+.+++ |
T Consensus 218 ~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~y~~p~~~g~~iG~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-p 293 (382)
T 1y56_B 218 IPIEPYKHQAVITQPIKRGTINPMVIS--FKYGHAYLTQTFHGGIIGGIGYEI-GPTYDLTPTYEFLREVSYYFTKII-P 293 (382)
T ss_dssp CCCEEEEEEEEEECCCSTTSSCSEEEE--STTTTEEEECCSSSCCEEECSCCB-SSCCCCCCCHHHHHHHHHHHHHHC-G
T ss_pred cCCCeeEeEEEEEccCCcccCCCeEEe--cCCCeEEEEEeCCeEEEecCCCCC-CCCCCCCCCHHHHHHHHHHHHHhC-C
Confidence 468899999888764322212134443 2213588999765588884 3222 123356678888999999999999 8
Q ss_pred CCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC--CCeEEEecccc
Q 013476 388 KVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGGKW 437 (442)
Q Consensus 388 ~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~--~~~~~~~gg~~ 437 (442)
.+...++.+.|+|+||+|+| +.|+|...+ ||+++++|-.+
T Consensus 294 ~l~~~~~~~~~~g~r~~t~d----------~~p~ig~~~~~~~~~~~~G~~g 335 (382)
T 1y56_B 294 ALKNLLILRTWAGYYAKTPD----------SNPAIGRIEELNDYYIAAGFSG 335 (382)
T ss_dssp GGGGSEEEEEEEEEEEECTT----------SCCEEEEESSSBTEEEEECCTT
T ss_pred CcCCCCceEEEEeccccCCC----------CCcEeccCCCCCCEEEEEecCc
Confidence 88888899999999999999 689998764 89998887543
No 6
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=7.3e-32 Score=258.75 Aligned_cols=320 Identities=19% Similarity=0.211 Sum_probs=221.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (442)
+.++||||||||++|+++|++|+ +|++|+||||.. +++++|+++.|+++...... ...+......
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~-------------~~~~l~~~~~ 72 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGTP-------------QVRALTAASR 72 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSCH-------------HHHHHHHHHH
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCCH-------------HHHHHHHHHH
Confidence 45699999999999999999999 699999999995 77789999998886543210 0111111111
Q ss_pred HHHHhCC-cc-----cccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeE
Q 013476 148 QVIRNAP-HL-----SNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGA 221 (442)
Q Consensus 148 ~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 221 (442)
..+.... .+ ......+...... ..... ....+.+. ..+++ .++++.+++...+|.+ ......++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~-~~~~~---~~~~~~~~-~~g~~-~~~l~~~~~~~~~p~l----~~~~~~~~ 142 (381)
T 3nyc_A 73 AFFDNPPAGFCEHPLLSPRPEMVVDFSD-DPEEL---RRQYESGK-ALVPQ-MRLLDAEQACSIVPVL----RRDKVFGA 142 (381)
T ss_dssp HHHHSCCTTSCSSCSEEECCEEEECSSC-CHHHH---HHHHHHHH-HHCTT-CEEECHHHHHHHSTTB----CGGGCCCE
T ss_pred HHHHHhhhhhCCcccccccceEEEechH-HHHHH---HHHHHHHH-HcCCC-cEEeCHHHHHHhCCCc----ccccceEE
Confidence 2222111 10 1111111111111 11111 12222222 45665 7889999999999987 44434444
Q ss_pred E-EeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHh
Q 013476 222 V-VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVR 300 (442)
Q Consensus 222 ~-~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~ 300 (442)
+ .+..+.++|..++..|.+.++++|++|+++++|++|..+++ + ++|++ . . .++.||.||+|+|.|+..|+
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~--~-~~V~t---~--~-g~i~a~~VV~A~G~~s~~l~ 213 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG--A-WEVRC---D--A-GSYRAAVLVNAAGAWCDAIA 213 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT--E-EEEEC---S--S-EEEEESEEEECCGGGHHHHH
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC--e-EEEEe---C--C-CEEEcCEEEECCChhHHHHH
Confidence 4 45678899999999999999999999999999999998874 4 33433 1 2 37999999999999999999
Q ss_pred hhhCCCCCCcccCCCeeEEEeCCCCC--CCCceEEeeecCCCcEEEEEecCCcEEEccCCCCCCCCCCCCCCHHHHHHHH
Q 013476 301 KLADQNVQPMICPSSGVHIVLPDYYS--PEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFIL 378 (442)
Q Consensus 301 ~~~g~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 378 (442)
+.+|+. ..++.|.+|+++.++.... ....+.+.. .+ ..+|++|..|++++|++.+....+.+..+++..++.++
T Consensus 214 ~~~g~~-~~~~~p~rg~~~~~~~~~~~~~~~~p~~~~--~~-~~~y~~p~~g~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 289 (381)
T 3nyc_A 214 GLAGVR-PLGLQPKRRSAFIFAPPPGIDCHDWPMLVS--LD-ESFYLKPDAGMLLGSPANADPVEAHDVQPEQLDIATGM 289 (381)
T ss_dssp HHHTCC-CCCCEEEEEEEEEECCCTTCCCTTCCEEEE--TT-SSCEEEEETTEEEEECCCCEECCSSCCCCCHHHHHHHH
T ss_pred HHhCCC-CCceeeeEEEEEEECCCcCCCcCccceEEe--CC-CCEEEEeCCCcEEEeCCcCCCCCcccCCCChHHHHHHH
Confidence 999876 2478999999888865431 122233332 22 24788998888999988764323345667777788888
Q ss_pred HHhhhhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC--CCeEEEecccc
Q 013476 379 DAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGGKW 437 (442)
Q Consensus 379 ~~~~~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~--~~~~~~~gg~~ 437 (442)
+.+..+ |.+...++.+.|+|+||+|+| +.|+|..++ |+++.++|-.+
T Consensus 290 ~~~~~~--~~l~~~~~~~~w~G~r~~t~D----------~~p~ig~~~~~~~l~~a~G~~g 338 (381)
T 3nyc_A 290 YLIEEA--TTLTIRRPEHTWAGLRSFVAD----------GDLVAGYAANAEGFFWVAAQGG 338 (381)
T ss_dssp HHHHHH--BSCCCCCCSEEEEEEEEECTT----------SCCEEEECTTSTTEEEEECCTT
T ss_pred HHHHhc--CCCcccceeeeeEEccccCCC----------CCceecCCCCCCCeEEEEcCCC
Confidence 888764 577778899999999999999 689999864 89999988543
No 7
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.98 E-value=9.1e-30 Score=246.22 Aligned_cols=325 Identities=18% Similarity=0.208 Sum_probs=223.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHH-CC-CeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAAT-RG-LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~-~G-~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (442)
.++||+|||||++|+++|++|++ +| ++|+||||..+++++|+++.|.++....... ...+..+.+..+.
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~---------~~~l~~~~~~~~~ 90 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDE---------SAGIYEKSLKLWE 90 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHH---------HHHHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCHH---------HHHHHHHHHHHHH
Confidence 45899999999999999999999 99 9999999999888899999888876543211 1111111122221
Q ss_pred HHHHhCC--cccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCcccccccc-----CCcee
Q 013476 148 QVIRNAP--HLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKD-----RSLKG 220 (442)
Q Consensus 148 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~ 220 (442)
....... ........+............ .+..+++. ..+.+ .++++.++....+|.+ .. ....+
T Consensus 91 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~---~~~~~~~~-~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~ 161 (405)
T 2gag_B 91 QLPEDLEYDFLFSQRGVLNLAHTLGDVRES---VRRVEANK-LNGVD-AEWLDPSQVKEACPII----NTSDDIRYPVMG 161 (405)
T ss_dssp HHHHHTTCCCCCBCCCEEEEECSHHHHHHH---HHHHHHHH-TBTCC-CEEECHHHHHHHCTTS----CCSTTSSSCCCE
T ss_pred HHHHHhCCCcCEecccEEEEEcCHHHHHHH---HHHHHHHH-hcCCC-ceEeCHHHHHhhCCCC----ccccccccccee
Confidence 1111111 000111111111111111111 12233332 56665 7889999988888876 33 23334
Q ss_pred E-EEeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHH
Q 013476 221 A-VVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (442)
Q Consensus 221 ~-~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l 299 (442)
+ +.+..+.++|..++..|.+.+++.|++++++++|++|..++ + ++++|++ .+| .+.||.||+|+|.++..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~-~~~~v~~---~~g---~~~a~~vV~a~G~~s~~l 233 (405)
T 2gag_B 162 ATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-E-KVTGVKT---TRG---TIHAGKVALAGAGHSSVL 233 (405)
T ss_dssp EEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-S-BEEEEEE---TTC---CEEEEEEEECCGGGHHHH
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-C-EEEEEEe---CCc---eEECCEEEECCchhHHHH
Confidence 4 44568899999999999999999999999999999999876 4 7777765 233 689999999999999999
Q ss_pred hhhhCCCCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEec-CCcEEEccCCCCCCCCCCCCCCHHHHHHHH
Q 013476 300 RKLADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFIL 378 (442)
Q Consensus 300 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 378 (442)
++.+|+.. ++.+.+++++..+... +.....++. .+ ..+|++|. ++.+++|.+.++. ...+..++++..+.++
T Consensus 234 ~~~~g~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~--~~-~~~y~~p~~~g~~~ig~~~~~~-~~~~~~~~~~~~~~l~ 306 (405)
T 2gag_B 234 AEMAGFEL--PIQSHPLQALVSELFE-PVHPTVVMS--NH-IHVYVSQAHKGELVMGAGIDSY-NGYGQRGAFHVIQEQM 306 (405)
T ss_dssp HHHHTCCC--CEEEEEEEEEEEEEBC-SCCCSEEEE--TT-TTEEEEECTTSEEEEEEEECSS-CCCSSCCCTHHHHHHH
T ss_pred HHHcCCCC--CccccceeEEEecCCc-cccCceEEe--CC-CcEEEEEcCCCcEEEEeccCCC-CccccCCCHHHHHHHH
Confidence 99888764 6788888877664321 111122222 22 35788885 5678898876532 2234456677889999
Q ss_pred HHhhhhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC-CCeEEEeccccc
Q 013476 379 DAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF-PGLVTITGGKWT 438 (442)
Q Consensus 379 ~~~~~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~-~~~~~~~gg~~~ 438 (442)
+.+.+++ |.+...++.+.|+|+||+|+| +.|+|...+ +|+++++|..+.
T Consensus 307 ~~~~~~~-p~l~~~~~~~~w~g~~~~t~d----------~~p~ig~~~~~~l~~~~G~~g~ 356 (405)
T 2gag_B 307 AAAVELF-PIFARAHVLRTWGGIVDTTMD----------ASPIISKTPIQNLYVNCGWGTG 356 (405)
T ss_dssp HHHHHHC-GGGGGCEECEEEEEEEEEETT----------SCCEEEECSSBTEEEEECCGGG
T ss_pred HHHHHhC-CccccCCcceEEeeccccCCC----------CCCEecccCCCCEEEEecCCCc
Confidence 9999999 888878889999999999999 689998874 899999886544
No 8
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.97 E-value=9.1e-30 Score=244.89 Aligned_cols=324 Identities=14% Similarity=0.145 Sum_probs=214.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCC--CCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS--GTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (442)
+++||+|||||++|+++|++|+++|++|+|||+...++ ++|..+.++++..... .........+....+.
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~ 73 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGE--------GREYVPLALRSQELWY 73 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTT--------CGGGHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcC--------CchHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999998776 7777777666542210 0011111222222222
Q ss_pred HHHHhCC-cccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEEE-ee
Q 013476 148 QVIRNAP-HLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVV-YY 225 (442)
Q Consensus 148 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~ 225 (442)
.+..... ........+...... ..... .+..+++ +..+++ .++++.++....+|.+ ......++++ +.
T Consensus 74 ~l~~~~~~~~~~~~g~~~~~~~~-~~~~~---~~~~~~~-~~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~~ 143 (389)
T 2gf3_A 74 ELEKETHHKIFTKTGVLVFGPKG-ESAFV---AETMEAA-KEHSLT-VDLLEGDEINKRWPGI----TVPENYNAIFEPN 143 (389)
T ss_dssp HHHHHCSSCCEECCCEEEEEETT-CCHHH---HHHHHHH-HHTTCC-CEEEETHHHHHHSTTC----CCCTTEEEEEETT
T ss_pred HHHHHhCCcceeecceEEEcCCC-chHHH---HHHHHHH-HHcCCC-cEEcCHHHHHHhCCCc----ccCCCceEEEeCC
Confidence 2211111 111111111100000 10111 1222333 245665 6788888888888876 4344444444 55
Q ss_pred CcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 226 DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 226 ~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
.+.++|..++..|.+.+++.|++++++++|++|..++++ + .+.. .+ ..++||.||+|+|.++..|++.++.
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~---~v~~-~~---g~~~a~~vV~A~G~~~~~l~~~~g~ 214 (389)
T 2gf3_A 144 SGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--V---KIET-AN---GSYTADKLIVSMGAWNSKLLSKLNL 214 (389)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--E---EEEE-TT---EEEEEEEEEECCGGGHHHHGGGGTE
T ss_pred CcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--E---EEEe-CC---CEEEeCEEEEecCccHHHHhhhhcc
Confidence 788999999999999999999999999999999987743 2 2232 12 3799999999999999999988875
Q ss_pred CCCCcccCCCeeEEEeCCCCC----CCCceEEeeecCCCcEEEEEecCC--cEEEccCCCCC---CCCCCCCC--CHHHH
Q 013476 306 NVQPMICPSSGVHIVLPDYYS----PEGMGLIVPKTKDGRVVFMLPWLG--RTVAGTTDSDT---VITLLPEP--HEDEI 374 (442)
Q Consensus 306 ~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~g--~~~~g~~~~~~---~~~~~~~~--~~~~~ 374 (442)
.. ++.|.+|+++.++.... ....+.++....+ ..+|++|..+ ++++|.+.... ....+..+ +++..
T Consensus 215 ~~--pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~ 291 (389)
T 2gf3_A 215 DI--PLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPN-GIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDE 291 (389)
T ss_dssp EC--CCEEEEEEEEEECCCHHHHBGGGTCCEEEEEETT-EEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSSHHHH
T ss_pred CC--ceEEEEEEEEEEecCcccccccccCCEEEEeCCC-CcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCCHHHH
Confidence 43 68899999888865420 0012233321222 2688999754 88898765210 11234556 78888
Q ss_pred HHHHHHhhhhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC--CCeEEEecc
Q 013476 375 QFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGG 435 (442)
Q Consensus 375 ~~~~~~~~~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~--~~~~~~~gg 435 (442)
+.+++.+.+++ |.+.. ++.+.|+|+||+||| +.|+|..++ ||+++++|-
T Consensus 292 ~~l~~~~~~~~-P~l~~-~~~~~w~g~r~~t~D----------~~p~ig~~~~~~~l~~a~G~ 342 (389)
T 2gf3_A 292 SNLRAFLEEYM-PGANG-ELKRGAVCMYTKTLD----------EHFIIDLHPEHSNVVIAAGF 342 (389)
T ss_dssp HHHHHHHHHHC-GGGCS-CEEEEEEEEEEECTT----------SCCEEEEETTEEEEEEEECC
T ss_pred HHHHHHHHHhC-CCCCC-CceEEEEEEeccCCC----------CCeEEccCCCCCCEEEEECC
Confidence 99999999999 77776 788999999999999 689998864 789999983
No 9
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.97 E-value=4.9e-30 Score=246.15 Aligned_cols=323 Identities=19% Similarity=0.215 Sum_probs=215.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHH-hhhccCcchHHHHHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEK-AVFNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 147 (442)
+.++||||||||++|+++|++|+++|++|+|||+..+++++|+.+.|++.+....... ....+.....+.+.+......
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELY 94 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4569999999999999999999999999999999988888899999888765432100 000000011111101111100
Q ss_pred HHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEEEeeCc
Q 013476 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 227 (442)
........+.. ...+...... ...+.+.........++++.+++...+|.+ ......+.+.+..+
T Consensus 95 ~~~~~~~~~~~-~g~l~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~----~~~~~~~~~~~~~~ 159 (382)
T 1ryi_A 95 ALSGVDIRQHN-GGMFKLAFSE----------EDVLQLRQMDDLDSVSWYSKEEVLEKEPYA----SGDIFGASFIQDDV 159 (382)
T ss_dssp HHHCCCCCCBC-CCEEEEESSH----------HHHHHHHTTTTSTTEEEEEHHHHHHHCTTS----CTTCCEEEEETTCC
T ss_pred HhhCCCcCeee-cceEEEEeCH----------HHHHHHHHHhhcCCeEEECHHHHHHhCCCC----CcccceEEEeCCCe
Confidence 00001111100 0000000010 011111111110237788888888888876 32223333445678
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
.+++..+...|.+.+++.|++++++++|++|..+++ ++ +|.. .+ . .+.||.||+|+|.++..|++.++...
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~--~~-~v~~---~~--g-~~~a~~vV~A~G~~s~~l~~~~~~~~ 230 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGE--AL-FIKT---PS--G-DVWANHVVVASGVWSGMFFKQLGLNN 230 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSS--SE-EEEE---TT--E-EEEEEEEEECCGGGTHHHHHHTTCCC
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECC--EE-EEEc---CC--c-eEEcCEEEECCChhHHHHHHhcCCCC
Confidence 899999999999999999999999999999998774 44 4543 22 2 78999999999999988999887653
Q ss_pred CCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEec-CCcEEEccCCCCCCCCCCCCCCHHHHHHHHHHhhhhcC
Q 013476 308 QPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLN 386 (442)
Q Consensus 308 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (442)
++.|.+|+++.++....... ..++. + ..|++|. ++.+++|.+.+.. ..+..++++..+.+++.+.+++
T Consensus 231 --~~~~~~g~~~~~~~~~~~~~-~~~~~---~--~~~~~p~~~g~~~vG~~~~~~--~~~~~~~~~~~~~l~~~~~~~~- 299 (382)
T 1ryi_A 231 --AFLPVKGECLSVWNDDIPLT-KTLYH---D--HCYIVPRKSGRLVVGATMKPG--DWSETPDLGGLESVMKKAKTML- 299 (382)
T ss_dssp --CCEEEEEEEEEEECCSSCCC-SEEEE---T--TEEEEECTTSEEEEECCCEET--CCCCSCCHHHHHHHHHHHHHHC-
T ss_pred --ceeccceEEEEECCCCCCcc-ceEEc---C--CEEEEEcCCCeEEEeeccccc--CCCCCCCHHHHHHHHHHHHHhC-
Confidence 68899998887764332211 22222 2 3788997 4678899876542 3455677888999999999999
Q ss_pred CCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC--CCeEEEeccc
Q 013476 387 VKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGGK 436 (442)
Q Consensus 387 ~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~--~~~~~~~gg~ 436 (442)
|.+...++.+.|+|+||+|+| +.|+|...+ +|+++++|-.
T Consensus 300 p~l~~~~~~~~w~g~~~~t~d----------~~p~ig~~~~~~~l~~~~G~~ 341 (382)
T 1ryi_A 300 PAIQNMKVDRFWAGLRPGTKD----------GKPYIGRHPEDSRILFAAGHF 341 (382)
T ss_dssp GGGGGSEEEEEEEEEEEECSS----------SCCEEEEETTEEEEEEEECCS
T ss_pred CCcCCCceeeEEEEecccCCC----------CCcEeccCCCcCCEEEEEcCC
Confidence 788877889999999999999 688998764 7888887743
No 10
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.97 E-value=4e-29 Score=240.99 Aligned_cols=328 Identities=14% Similarity=0.075 Sum_probs=209.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCC--CCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHHH
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS--GTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (442)
++||||||||++|+++|++|+++|++|+||||...+. ++|..+.+++...... . .......+.+..+..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~ 74 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQ--E-------DLFRLTLETLPLWRA 74 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSS--H-------HHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCc--c-------hhhhHHHHHHHHHHH
Confidence 4899999999999999999999999999999997655 6666555554321100 0 000111111111111
Q ss_pred HHHh-CCcccccCCCcccCCchh--hHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeE-EEe
Q 013476 149 VIRN-APHLSNALPCMTPCFDWF--EVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGA-VVY 224 (442)
Q Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~ 224 (442)
+... ..........+....... ..... ....+++. ..+++ .+.++.++....+|.+ ......++ +.+
T Consensus 75 l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~---~~~~~~~~-~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~ 145 (397)
T 2oln_A 75 LESRCERRLIHEIGSLWFGDTDVVTNEGQI---SGTAAMMD-KLSVR-YEWLKATDIERRFGFR----GLPRDYEGFLQP 145 (397)
T ss_dssp HHHHHTCCCEECCCEEEEECSSCCBTTBCH---HHHHHHHH-HTTCC-CEEEEHHHHHHHHCCC----SCCTTCEEEEET
T ss_pred HHHHhCccHHHHCCcEEEcCCCccchhHHH---HHHHHHHH-HcCCC-ceecCHHHHHhhCcCc----cCCCceeEEEcC
Confidence 1111 001111100000000000 00000 02223332 45665 6777888887777766 33333344 445
Q ss_pred eCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhC
Q 013476 225 YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (442)
Q Consensus 225 ~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g 304 (442)
..+.+++..++..|.+.+++.|++|+++++|++|+.+++ .+. +.. .+ .+++||.||+|+|.|+.+|++.+|
T Consensus 146 ~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~--~v~---v~t-~~---g~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 146 DGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD--GVS---VTT-DR---GTYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp TCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT--EEE---EEE-SS---CEEEEEEEEECCGGGHHHHHGGGT
T ss_pred CCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC--eEE---EEE-CC---CEEEcCEEEEcCCcChHHHhhhcC
Confidence 577899999999999999999999999999999998764 442 332 22 269999999999999999999888
Q ss_pred CCCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCc----EEEEEecC-C----cEEEccCCC--CC--CCCCCCCCCH
Q 013476 305 QNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGR----VVFMLPWL-G----RTVAGTTDS--DT--VITLLPEPHE 371 (442)
Q Consensus 305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~-g----~~~~g~~~~--~~--~~~~~~~~~~ 371 (442)
.. .++.+.+++++.++........+.++....+++ ..|++|.. + ++++|.+.. .. ....+..+++
T Consensus 217 ~~--~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 294 (397)
T 2oln_A 217 AR--LAYSVYEMAIAAYRQATPVTEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADR 294 (397)
T ss_dssp CC--CCEEEEEEEEEEEEBCSCCSCCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSSGGGCCSSCCH
T ss_pred CC--CCeeEEEEEEEEEeecCcccCCCEEEEecCCCCcccceEEECCCCCCCCCceEEEEecCCCCCcCCCccccCCCCH
Confidence 75 368999998887754321112233332122322 57888963 3 588987653 10 1123456778
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCeeeeeeeccc--cccCCCCCCCCCcccceeeEecC------CCeEEEecccccc
Q 013476 372 DEIQFILDAISDYLNVKVRRTDVLSAWSGIRP--LAMDPSAKNTESISRDHVVCEDF------PGLVTITGGKWTT 439 (442)
Q Consensus 372 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~r~--~t~D~~~~~~~~~~~~~~i~~~~------~~~~~~~gg~~~~ 439 (442)
+..+.+.+.+.+++ |.+.. .+.+.|+|+|+ +||| +.|+|..++ ||+++++||-|.+
T Consensus 295 ~~~~~l~~~~~~~~-p~l~~-~~~~~~~g~~~~p~t~D----------~~p~ig~~~~~~~~~~~l~~a~Gg~G~~ 358 (397)
T 2oln_A 295 RQMDRLSGWLRDHL-PTVDP-DPVRTSTCLAVLPTDPE----------RQFFLGTARDLMTHGEKLVVYGAGWAFK 358 (397)
T ss_dssp HHHHHHHHHHHHHC-TTBCS-SCSEEEEEEEEEESSTT----------CCCEEEESTTTSTTGGGEEEEEESSCGG
T ss_pred HHHHHHHHHHHHhC-CCCCC-CceeEEEEEecCCcCCC----------CCeEeecCCccccCCCCEEEEeCcchhh
Confidence 88999999999999 77776 67889999988 9999 689999863 6899999954443
No 11
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.97 E-value=8.1e-30 Score=249.74 Aligned_cols=321 Identities=17% Similarity=0.129 Sum_probs=213.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEec-cCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVER-EDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G-~~V~liEk-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (442)
|.++||||||||++|+++|++|+++| ++|+|||| ..++.++|+.+.|+++....... ...+.......+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~~~~~---------~~~l~~~~~~~~ 91 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSSTM---------NRLVAGSTVRLF 91 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCEEECCCSSHH---------HHHHHHHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcEecccCCCHH---------HHHHHHHHHHHH
Confidence 45699999999999999999999999 99999999 67888899999988876432110 011111111111
Q ss_pred HHHHHhC--CcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcc-----eec-----------CHhhHHhhCCc
Q 013476 147 KQVIRNA--PHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLS-----RYY-----------SAQESAELFPT 208 (442)
Q Consensus 147 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~-----------~~~~~~~~~p~ 208 (442)
..+.... ..+. ....+. .......... ....+.+ +..+++ . +++ +.+++..
T Consensus 92 ~~l~~~g~~~~~~-~~g~l~-~~~~~~~~~~---~~~~~~~-~~~g~~-~~p~~~~~l~~~g~~~~~~~~~~~~~~---- 160 (448)
T 3axb_A 92 EDAQRGGEDLGLV-KSGYLF-VYDRERWREV---EEPLREA-GEEGRD-YLIIPPEELERRLGMNTRVSDGEEAEV---- 160 (448)
T ss_dssp HHHHHTTCCCCCB-CCCEEE-EECHHHHHHH---HHHHTTS-CCBTTT-EEEECHHHHHHHHCCCCCCTTSSHHHH----
T ss_pred HHHHhcCcccccc-cCCEEE-EcCHHHHHHH---HHHHHHH-HhhCCC-ccccchhhhhhcccccccCCCHHHHHh----
Confidence 1111110 1111 111111 1111111100 0111111 233443 3 444 5555444
Q ss_pred cccccccCCceeEE-EeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEE---------------cCCCCeEEEEEE
Q 013476 209 LAMKAKDRSLKGAV-VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIK---------------DEASNRIIGARI 272 (442)
Q Consensus 209 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~---------------~~~g~~v~gV~~ 272 (442)
+ ......+++ .+..+.+++..++..|.+.++++|++|+++++|++|.. ++ + +|++|.+
T Consensus 161 ~----~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~-~v~~V~t 234 (448)
T 3axb_A 161 L----GVGDVEGAVLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-A-RASAAVL 234 (448)
T ss_dssp H----TCCCCCEEEEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-E-EEEEEEE
T ss_pred c----cCCCceEEEEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-C-ceEEEEe
Confidence 1 123334444 34577899999999999999999999999999999988 44 4 7777765
Q ss_pred EECCCCceEEE--EcCEEEEccCCChHHHhhhhCCCCCCcccCCCeeEEEeCCCCC-CC------------CceEEeeec
Q 013476 273 RNNLSGKEFDT--YAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPDYYS-PE------------GMGLIVPKT 337 (442)
Q Consensus 273 ~~~~~g~~~~i--~a~~VVlAtG~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~-~~------------~~~~~~~~~ 337 (442)
.+| ++ .||.||+|+|.|+..|++.+|+. .++.|.+|+++.++.... .. ..+.++.
T Consensus 235 ---~~g---~i~~~Ad~VV~AtG~~s~~l~~~~g~~--~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-- 304 (448)
T 3axb_A 235 ---SDG---TRVEVGEKLVVAAGVWSNRLLNPLGID--TFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIIL-- 304 (448)
T ss_dssp ---TTS---CEEEEEEEEEECCGGGHHHHHGGGTCC--CSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEE--
T ss_pred ---CCC---EEeecCCEEEECCCcCHHHHHHHcCCC--CcccccceEEEEeCCcccccccccccccccccCCCceEEc--
Confidence 233 57 99999999999999999998875 478999999888864321 00 0123332
Q ss_pred CCCcEEEEEecC--CcEEEccCCCCC-CCCCCC--CCCHHH-HHHHHHHhhhhcCCCCCCCCeeeeeeecccc-ccCCCC
Q 013476 338 KDGRVVFMLPWL--GRTVAGTTDSDT-VITLLP--EPHEDE-IQFILDAISDYLNVKVRRTDVLSAWSGIRPL-AMDPSA 410 (442)
Q Consensus 338 ~~~~~~~~~p~~--g~~~~g~~~~~~-~~~~~~--~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~G~r~~-t~D~~~ 410 (442)
. ..+|++|+. |.+++|++.+.. ....+. .++++. .+.+++.+.+++ |.+...++.+.|+|+||+ |+|
T Consensus 305 ~--~~~y~~p~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~~~~~w~G~r~~~t~d--- 378 (448)
T 3axb_A 305 P--KRVLVRPAPREGSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYL-PQFQDAYPSGGWAGHYDISFDA--- 378 (448)
T ss_dssp T--TTEEEEEETTTTEEEEEECCCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHC-GGGTTCCCSEEEEEEEEEETTS---
T ss_pred C--CceEEeecCCCCeEEEecCCcccCCcccccccCCChHHHHHHHHHHHHHhC-cCcccCCcccceEEEeccccCC---
Confidence 1 357899975 478999987631 112233 667788 899999999999 888888899999999999 999
Q ss_pred CCCCCcccceeeEecCCCeEEEeccccc
Q 013476 411 KNTESISRDHVVCEDFPGLVTITGGKWT 438 (442)
Q Consensus 411 ~~~~~~~~~~~i~~~~~~~~~~~gg~~~ 438 (442)
+.|+|..+++|+++++|..+.
T Consensus 379 -------~~p~ig~~~~~l~~a~G~~g~ 399 (448)
T 3axb_A 379 -------NPVVFEPWESGIVVAAGTSGS 399 (448)
T ss_dssp -------SCEEECGGGCSEEEEECCTTC
T ss_pred -------CCcEeeecCCCEEEEECCCch
Confidence 689998877999999987543
No 12
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.97 E-value=1.6e-29 Score=259.44 Aligned_cols=311 Identities=15% Similarity=0.082 Sum_probs=202.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (442)
+.++||||||||++|+++|++|+++|++|+||||.. +++++|+++.|.+++...........+.........+.+.+
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~-- 339 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQ-- 339 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHH--
Confidence 456999999999999999999999999999999975 77788999888887543211100000000000011111111
Q ss_pred HHHHhCCc-ccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCC--cceecCHhhHHhhCCccccccccCCceeEEEe
Q 013476 148 QVIRNAPH-LSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLH--LSRYYSAQESAELFPTLAMKAKDRSLKGAVVY 224 (442)
Q Consensus 148 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 224 (442)
+...... .......+......... .....+. ..+++ ..++++.++....+| + . ....+.+.+
T Consensus 340 -l~~~~~~~~~~~~g~l~~~~~~~~~-------~~~~~~~-~~g~~~~~~~~l~~~~~~~~~~-l----~-~~~gg~~~p 404 (689)
T 3pvc_A 340 -LLEQGIAFDHQWCGVSQLAFDDKSR-------GKIEKML-HTQWPVEFAEAMSREQLSELAG-L----D-CAHDGIHYP 404 (689)
T ss_dssp -HHHTTCCCCEECCCEEEECCSHHHH-------HHHHHHT-TSCCCTTTCEEECHHHHHHHHS-S----C-CSSCEEEET
T ss_pred -hhhhccccccccCceEEeccCHHHH-------HHHHHHH-hcCCChHHhhccCHHHHHHhcC-C----C-cccceEEec
Confidence 1011000 00011111111111111 1122222 34544 234888888877776 4 1 223344456
Q ss_pred eCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhC
Q 013476 225 YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (442)
Q Consensus 225 ~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g 304 (442)
..+.+++..++..|.+.+++.|++|+++++|++|+.++++ + .|... +|. ..+.||.||+|+|.|+..+.+.++
T Consensus 405 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v-~V~t~---~G~-~~i~Ad~VVlAtG~~s~~l~~~~~ 477 (689)
T 3pvc_A 405 AGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--W-QLTFG---QSQ-AAKHHATVILATGHRLPEWEQTHH 477 (689)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--E-EEEEC----CC-CCEEESEEEECCGGGTTCSTTTTT
T ss_pred CCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--E-EEEeC---CCc-EEEECCEEEECCCcchhccccccC
Confidence 6889999999999999999999999999999999998754 3 34432 221 158999999999999988887654
Q ss_pred CCCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEecC---CcEEEccCCCCCCCCCCCCCCHHHHHHHHHHh
Q 013476 305 QNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL---GRTVAGTTDSDTVITLLPEPHEDEIQFILDAI 381 (442)
Q Consensus 305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (442)
.++.|++|+++.++..........++. .+ .|++|.. |.+++|++.+.. ..+..++++..+++++.+
T Consensus 478 ----lpl~p~rGq~~~~~~~~~~~~l~~v~~--~~---~Yl~P~~~~~g~~~iGat~~~~--~~d~~~~~~~~~~ll~~l 546 (689)
T 3pvc_A 478 ----LPLSAVRGQVSHIPTTPVLSQLQQVLC--YD---GYLTPVNPANQHHCIGASYQRG--DIATDFRLTEQQENRERL 546 (689)
T ss_dssp ----SCCEEEEEEEEEEECCTTGGGCCSEEE--SS---SEECCCBTTTTEEEEECCCEET--BCCCCCCHHHHHHHHHHH
T ss_pred ----CccccccCcEEEECCCCccccCCeeEe--CC---ceEccccCCCCeEEEEEeccCC--CCCCCCCHHHHHHHHHHH
Confidence 368899999988865432111222332 12 5889975 678999988653 345677888899999999
Q ss_pred hhhcCCCCC-----CCCeeeeeeeccccccCCCCCCCCCcccceeeEec
Q 013476 382 SDYLNVKVR-----RTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED 425 (442)
Q Consensus 382 ~~~~~~~l~-----~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~ 425 (442)
.+++ |.+. +..+.+.|+|+||+|+| +.|+|...
T Consensus 547 ~~~~-P~l~~~~~~~~~~~~~w~G~R~~t~D----------~lPiiG~~ 584 (689)
T 3pvc_A 547 LRCL-PQVSWPQQVDVSDNQARCGVRCAIRD----------HLPMVGAV 584 (689)
T ss_dssp HHHC-TTCSGGGGCCCTTCCEEEEEEEECTT----------SCCEEEEE
T ss_pred HHhC-CCccccccccccccceeEEEeeecCC----------CCcccCcC
Confidence 9999 7765 34568899999999999 67888754
No 13
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.96 E-value=2.1e-28 Score=251.01 Aligned_cols=305 Identities=14% Similarity=0.094 Sum_probs=202.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (442)
..+||||||||++|+++|++|+++|++|+||||.. +++++|+++.|.+++......... .+.....+.....
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~-------~~~~~~~~~~~~~ 343 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEAL-------NRFFSNAFTFARR 343 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHH-------HHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHH-------HHHHHHHHHHHHH
Confidence 34999999999999999999999999999999974 777889999888876432211100 0111111111112
Q ss_pred HHHhCCccc--ccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCC--cceecCHhhHHhhCCccccccccCCceeEEEe
Q 013476 149 VIRNAPHLS--NALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLH--LSRYYSAQESAELFPTLAMKAKDRSLKGAVVY 224 (442)
Q Consensus 149 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 224 (442)
.+....... .....+......... .....+. ..+++ ..++++.++.....| + . ....+.+.+
T Consensus 344 ~~~~l~~~~~~~~~g~l~~~~~~~~~-------~~~~~~~-~~g~~~~~~~~l~~~~~~~~~~-l----~-~~~gg~~~p 409 (676)
T 3ps9_A 344 FYDQLPVKFDHDWCGVTQLGWDEKSQ-------HKIAQML-SMDLPAELAVAVEANAVEQITG-V----A-TNCSGITYP 409 (676)
T ss_dssp HHHHCCSCCCEECCCEEEECCSHHHH-------HHHHHHH-TSCCCTTTCEEECHHHHHHHHS-S----C-CSSCEEEET
T ss_pred HHHHCCCCcCcCcCCeeeecCCHHHH-------HHHHHHH-hcCCcHHHhhhCCHHHHHHhhC-C----C-ccCCcEEec
Confidence 222211000 000111111111111 1122222 34444 344888888877766 3 1 223334445
Q ss_pred eCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhC
Q 013476 225 YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (442)
Q Consensus 225 ~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g 304 (442)
..+.+++..++..|.+.+++.|++|+++++|++|+.+++ ++ +|.. .+|. ++.||.||+|+|.|+..+.+..+
T Consensus 410 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~--~v-~V~t---~~G~--~i~Ad~VVlAtG~~s~~l~~~~~ 481 (676)
T 3ps9_A 410 QGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDD--CW-LLNF---AGDQ--QATHSVVVLANGHQISRFSQTST 481 (676)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT--EE-EEEE---TTSC--EEEESEEEECCGGGGGCSTTTTT
T ss_pred CCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC--eE-EEEE---CCCC--EEECCEEEECCCcchhccccccC
Confidence 688999999999999999999999999999999999874 43 3443 2333 69999999999999988887653
Q ss_pred CCCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEecC---CcEEEccCCCCCCCCCCCCCCHHHHHHHHHHh
Q 013476 305 QNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL---GRTVAGTTDSDTVITLLPEPHEDEIQFILDAI 381 (442)
Q Consensus 305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (442)
.++.|++|+++.++..........++. .+ .|++|.. +.+++|++.+. ...+..++++..+++++.+
T Consensus 482 ----lpl~p~rGq~~~~~~~~~~~~l~~~l~--~~---~Yl~P~~~~~g~~~iG~t~~~--~~~d~~~~~~~~~~~l~~l 550 (676)
T 3ps9_A 482 ----LPVYSVAGQVSHIPTTPELAELKQVLC--YD---GYLTPQNPANQHHCIGASYHR--GSEDTAYSEDDQQQNRQRL 550 (676)
T ss_dssp ----CSCEEEEEEEEEEECCTTGGGCCSEEE--SS---SEECCCBTTTTEEEEECCCEE--TCCCCCCCHHHHHHHHHHH
T ss_pred ----CcceeecCEEEEECCCcccccCCceeE--CC---eeeccccCCCCeEEEeeccCC--CCCCCCCCHHHHHHHHHHH
Confidence 368899999988865432111222222 12 5889964 77899998765 3346678888899999999
Q ss_pred hhhcCCCCC-----CCCeeeeeeeccccccCCCCCCCCCcccceeeEec
Q 013476 382 SDYLNVKVR-----RTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED 425 (442)
Q Consensus 382 ~~~~~~~l~-----~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~ 425 (442)
.+++ |.+. +..+.+.|+|+||+|+| +.|+|...
T Consensus 551 ~~~~-P~l~~~~~~d~~~~~~~~G~R~~t~D----------~lPiiG~~ 588 (676)
T 3ps9_A 551 IDCF-PQAQWAKEVDVSDKEARCGVRCATRD----------HLPMVGNV 588 (676)
T ss_dssp HHHS-TTCHHHHTCCCTTCCEEEEEEEECTT----------CCCEEEEE
T ss_pred HHhC-CCccccccCcccccceEEEEeCccCC----------cCCccCcC
Confidence 9999 7764 24567899999999999 67888764
No 14
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.96 E-value=1.6e-27 Score=249.82 Aligned_cols=320 Identities=15% Similarity=0.169 Sum_probs=216.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC--CCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF--SSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~--~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (442)
.++||||||||++|+++|++|+++|. +|+||||+.. .+++++++.|++...... . .........
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~-----------~--~~~~l~~~s 69 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPS-----------K--TMASFAKYT 69 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSC-----------H--HHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCC-----------H--HHHHHHHHH
Confidence 35899999999999999999999998 9999999975 356677777665332100 0 001111111
Q ss_pred HHHHHhCCc----ccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEE
Q 013476 147 KQVIRNAPH----LSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAV 222 (442)
Q Consensus 147 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 222 (442)
...+..... .......+............ ....+++ +..|++ .++++.++....+|.+ ......+++
T Consensus 70 ~~~~~~l~~~~~~~~~~~G~l~~~~~~~~~~~l---~~~~~~~-~~~G~~-~~~l~~~e~~~~~p~l----~~~~~~gg~ 140 (830)
T 1pj5_A 70 VEKLLSLTEDGVSCFNQVGGLEVATTETRLADL---KRKLGYA-AAWGIE-GRLLSPAECQELYPLL----DGENILGGL 140 (830)
T ss_dssp HHHHHHCEETTEESEECCCEEEEESSHHHHHHH---HHHHHHH-HHHTCC-CEEECHHHHHHHCTTS----CGGGCCEEE
T ss_pred HHHHHHHHhhCCCCeeecCcEEEEeCHHHHHHH---HHHHHHH-HHcCCC-eEEECHHHHHHhCccC----CccceEEEE
Confidence 111111110 00000000001111111111 1122222 245665 7889999999989887 444445555
Q ss_pred E-eeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhh
Q 013476 223 V-YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRK 301 (442)
Q Consensus 223 ~-~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~ 301 (442)
+ +.++.++|..++..|.+.++++|++|+++++|++|..++ + ++++|.+. + ..++||.||+|+|.|+..+.+
T Consensus 141 ~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~-~v~~V~t~---~---G~i~Ad~VV~AaG~~s~~l~~ 212 (830)
T 1pj5_A 141 HVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-G-RVTGVQTA---D---GVIPADIVVSCAGFWGAKIGA 212 (830)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---T---EEEECSEEEECCGGGHHHHHH
T ss_pred EECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-C-EEEEEEEC---C---cEEECCEEEECCccchHHHHH
Confidence 4 567889999999999999999999999999999999876 4 77777652 2 279999999999999999999
Q ss_pred hhCCCCCCcccCCCeeEEEeCCCCC---------CCCceEEeeecCCCcEEEEEecCCcEEEccCCCCC--------CC-
Q 013476 302 LADQNVQPMICPSSGVHIVLPDYYS---------PEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDT--------VI- 363 (442)
Q Consensus 302 ~~g~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~p~~g~~~~g~~~~~~--------~~- 363 (442)
++|+.. ++.|.+++++.+..... ....+++.. .+ ..+|++|..+++++|.+.... ..
T Consensus 213 ~~g~~~--pl~p~~g~~~~~~~~~~~~~~~~~~~~~~~pv~~~--~~-~~~y~r~~~~~l~iG~~~~~~~~~~~~~~~~t 287 (830)
T 1pj5_A 213 MIGMAV--PLLPLAHQYVKTTPVPAQQGRNDQPNGARLPILRH--QD-QDLYYREHGDRYGIGSYAHRPMPVDVDTLGAY 287 (830)
T ss_dssp TTTCCC--CCEEEEEEEEEESCCGGGTTTSCTTTCCCSCEEEE--GG-GTEEEEEETTEEEEEECCSCCCBCCGGGSCCC
T ss_pred HhCCCc--cceeceeEEEEEecCcccccccccccCCCCCeEEc--CC-CCEEEEEeCCeEEEeccCCCCcccCccccccc
Confidence 888764 68999999887754211 011222221 22 247889988888888764210 00
Q ss_pred ----------CCCCCCCHHHHHHHHHHhhhhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC--CCeEE
Q 013476 364 ----------TLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVT 431 (442)
Q Consensus 364 ----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~--~~~~~ 431 (442)
+.+..++++.++.+++.+.+++ |.+...++.+.|+|+||+||| +.|+|...+ +|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~i~~~w~G~r~~t~D----------~~PiIG~~p~~~gl~v 356 (830)
T 1pj5_A 288 APETVSEHHMPSRLDFTLEDFLPAWEATKQLL-PALADSEIEDGFNGIFSFTPD----------GGPLLGESKELDGFYV 356 (830)
T ss_dssp CGGGCBTTBSTTEECCCHHHHHHHHHHHHHHC-GGGGGSCEEEEEEEEEEECTT----------SCCEEEECSSSBTEEE
T ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhC-ccccccCcceEEEeecccCCC----------CCeeeccCCCCCCEEE
Confidence 1223467888899999999999 888888999999999999999 689999864 89999
Q ss_pred Eecc
Q 013476 432 ITGG 435 (442)
Q Consensus 432 ~~gg 435 (442)
++|-
T Consensus 357 a~G~ 360 (830)
T 1pj5_A 357 AEAV 360 (830)
T ss_dssp EESC
T ss_pred EECc
Confidence 9884
No 15
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.96 E-value=2.4e-27 Score=231.53 Aligned_cols=326 Identities=14% Similarity=0.077 Sum_probs=199.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCCCCCCcc-CCCCcccchhhhhHHhhhccCcchH------HHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSGTSS-RSTKLIHGGVRYLEKAVFNLDYGQL------KLVF 140 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~ 140 (442)
+.++||||||||++|+++|++|+++|+ +|+||||....++.+. ...+.+.... +. ..... ....
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~l~~ 75 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSG-QY-------SNNKDEIEVNEILAE 75 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCC-CS-------CCCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEec-cC-------CchhhhcchhHHHHH
Confidence 346899999999999999999999999 9999999975544332 2221111100 00 00000 1111
Q ss_pred HHHHHHHHHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCc-cccccccCCce
Q 013476 141 HALEERKQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPT-LAMKAKDRSLK 219 (442)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~ 219 (442)
+.+..+... ............+.......... .+...+....+.+..++++.+++...+|. + ....+.
T Consensus 76 ~~~~~~~~~-~~~~~~~~~~g~l~~~~~~~~~~------~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l----~~~~~~ 144 (438)
T 3dje_A 76 EAFNGWKND-PLFKPYYHDTGLLMSACSQEGLD------RLGVRVRPGEDPNLVELTRPEQFRKLAPEGV----LQGDFP 144 (438)
T ss_dssp HHHHHHHHC-TTTGGGEECCCEEEEECSHHHHH------HHHHHHCGGGCTTCEEECSHHHHHTTSCTTT----SCSCCT
T ss_pred HHHHHHhhC-ccccCcEeccceEEEecCcchHH------HHHHHHhhcccCCceecCCHHHHHHhCCccc----ccCCCC
Confidence 111111110 00000011111111111111111 12222222345553477888888888886 4 223333
Q ss_pred ---eEEEeeC-cccChHHHHHHHHHHHHHcCceEecCe---EEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEcc
Q 013476 220 ---GAVVYYD-GQMNDSRLNVGLALTAALAGAAVLNHA---EVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 292 (442)
Q Consensus 220 ---~~~~~~~-~~~~~~~l~~~l~~~~~~~Gv~i~~~~---~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAt 292 (442)
+.+.+.. +.+++..++..|.+.++++|++|++++ +|++|..++ + +++||++. +| .++.||.||+|+
T Consensus 145 g~~g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~-~v~gV~t~---~G--~~i~Ad~VV~At 217 (438)
T 3dje_A 145 GWKGYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-N-DVKGAVTA---DG--KIWRAERTFLCA 217 (438)
T ss_dssp TCEEEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-T-EEEEEEET---TT--EEEECSEEEECC
T ss_pred CceEEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-C-eEEEEEEC---CC--CEEECCEEEECC
Confidence 4445567 899999999999999999999999999 999999877 5 88888773 34 379999999999
Q ss_pred CCChHHHhhhhCCCCCCcccCCCeeEEEeCCCCC----CCCceEEeeecCCCcEEEEEec-CCc-EEEccCC----CCC-
Q 013476 293 GPFCDSVRKLADQNVQPMICPSSGVHIVLPDYYS----PEGMGLIVPKTKDGRVVFMLPW-LGR-TVAGTTD----SDT- 361 (442)
Q Consensus 293 G~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~-~g~-~~~g~~~----~~~- 361 (442)
|+|+..|++ ++ .++.|.+++...++.... ....+.+.. . +..+|+.|. +++ ++++... ...
T Consensus 218 G~~s~~l~~-l~----~~~~p~~~~~~~~~l~~~~~~~~~~~p~~~~--~-~~~~~~~p~~~~~~l~i~~~~~g~~~~~~ 289 (438)
T 3dje_A 218 GASAGQFLD-FK----NQLRPTAWTLVHIALKPEERALYKNIPVIFN--I-ERGFFFEPDEERGEIKICDEHPGYTNMVQ 289 (438)
T ss_dssp GGGGGGTSC-CT----TCCEEEEEEEEEEECCGGGHHHHTTCCEEEE--T-TTEEECSCCTTTCEEEEEECCSCEECEEE
T ss_pred CCChhhhcC-cc----cceeeEEEEEEEEEcChHHhhhhcCCCEEEE--C-CCceecCCCCCCCeEEEEeCCCCccCCcc
Confidence 999988877 32 245565554444332111 112233332 1 235676676 444 5564211 100
Q ss_pred -------CCCC-CCCCCHHHHHHHHHHhhhhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC--CCeEE
Q 013476 362 -------VITL-LPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVT 431 (442)
Q Consensus 362 -------~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~--~~~~~ 431 (442)
..+. ....+++..+.+.+.+.+++ |.+...++.+.|+|+||+||| +.|+|..++ +|+|+
T Consensus 290 ~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~~~~~~~g~~~~t~D----------~~piig~~p~~~~l~~ 358 (438)
T 3dje_A 290 SADGTMMSIPFEKTQIPKEAETRVRALLKETM-PQLADRPFSFARICWCADTAN----------REFLIDRHPQYHSLVL 358 (438)
T ss_dssp CTTCCEEECCCCCSSCBHHHHHHHHHHHHHHC-GGGTTCCCSEEEEEEEEECTT----------SCCEEEECSSCTTEEE
T ss_pred CCCcccccCCcccccCCHHHHHHHHHHHHHhC-cccccCCcceeeEEEeCcCCC----------CCeEEeecCCCCCEEE
Confidence 0011 12345677888999999999 899989999999999999999 689999874 89999
Q ss_pred Eecccccc
Q 013476 432 ITGGKWTT 439 (442)
Q Consensus 432 ~~gg~~~~ 439 (442)
++|..+..
T Consensus 359 a~G~~g~G 366 (438)
T 3dje_A 359 GCGASGRG 366 (438)
T ss_dssp EECCTTCC
T ss_pred EECCCCcc
Confidence 99976544
No 16
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.96 E-value=1.2e-27 Score=228.64 Aligned_cols=320 Identities=14% Similarity=0.082 Sum_probs=201.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCC--CccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHHH
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG--TSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g--~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (442)
++||+|||||++|+++|++|+++|++|+||||...+.+ ++..+.+++...... ......+.......+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~ 73 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGE--------GEKYVPLVLRAQMLWDE 73 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTT--------CGGGHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCC--------CchHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999975543 222222233211100 00111111122222222
Q ss_pred HHHhCC--cccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCc-eeEEEee
Q 013476 149 VIRNAP--HLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSL-KGAVVYY 225 (442)
Q Consensus 149 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~ 225 (442)
+..... ........+....... ... ....+.+ +..+++ .++++.++....+|.+ ..+.. .+.+.+.
T Consensus 74 l~~~~~~~~~~~~~g~l~~~~~~~--~~~---~~~~~~~-~~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~~ 142 (372)
T 2uzz_A 74 LSRHNEDDPIFVRSGVINLGPADS--TFL---ANVAHSA-EQWQLN-VEKLDAQGIMARWPEI----RVPDNYIGLFETD 142 (372)
T ss_dssp HHTTCSSSCSEECCCEEEEEETTC--HHH---HHHHHHH-HHTTCC-EEEEEHHHHHHHCTTC----CCCTTEEEEEESS
T ss_pred HHHhCCCccceeeeceEEEeCCCc--HHH---HHHHHHH-HHcCCC-cEecCHHHHHhhCCCc----cCCCCceEEEeCC
Confidence 110000 1111111000000000 111 0122222 256665 7889999998888876 33333 3444567
Q ss_pred CcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 226 DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 226 ~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
.+.++|..++..|.+.+++.|++++++++|++|..+++ .+ .|.. .+| .+.||.||+|+|.|+..|++.
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~--~~-~v~~---~~g---~~~a~~vV~a~G~~s~~l~~~--- 210 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD--GV-TIET---ADG---EYQAKKAIVCAGTWVKDLLPE--- 210 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS--SE-EEEE---SSC---EEEEEEEEECCGGGGGGTSTT---
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCC--EE-EEEE---CCC---eEEcCEEEEcCCccHHhhccc---
Confidence 88999999999999999999999999999999998774 32 2332 233 589999999999999887762
Q ss_pred CCCCcccCCCeeEEEeCCCCCC---CCceEEeeecCCCcEEEEEec-CCcEEEccCCCC--CC---CCCCCCCCHHHHHH
Q 013476 306 NVQPMICPSSGVHIVLPDYYSP---EGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSD--TV---ITLLPEPHEDEIQF 376 (442)
Q Consensus 306 ~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~~~~~--~~---~~~~~~~~~~~~~~ 376 (442)
.++.|.+++++.+...... ...+.+.....++...|++|. ++.+++|.+... .+ ...+..++++..+.
T Consensus 211 ---l~~~p~rg~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~y~~p~~~~~~~iG~~~~g~~~~~~~~~~~~~~~~~~~~~ 287 (372)
T 2uzz_A 211 ---LPVQPVRKVFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSE 287 (372)
T ss_dssp ---CCCEEEECCEEEECCCGGGSTTTTCCEEEEECTTCCEEEEECCSSSCEEEEESSCCEECCSGGGCCCTTTSTTGGGS
T ss_pred ---cCceEEEEEEEEEEeccccCccccCCEEEEecCCCCeEEecCCCCCeEEEEecCCCCccCChhhccCCCCCHHHHHH
Confidence 3678999988777543110 112233221234456888886 568889886521 11 11122334566778
Q ss_pred HHHHhhhhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEecC--CCeEEEecccc
Q 013476 377 ILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGGKW 437 (442)
Q Consensus 377 ~~~~~~~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~--~~~~~~~gg~~ 437 (442)
+++.+.+++ |.+. ++.+.|+|+||+||| +.|+|..++ +|+++++|-.+
T Consensus 288 l~~~~~~~~-P~l~--~~~~~~~g~r~~t~d----------~~p~ig~~~~~~~l~~~~G~~g 337 (372)
T 2uzz_A 288 AFPFLRNVL-PGIG--CCLYGAACTYDNSPD----------EDFIIDTLPGHDNTLLITGLSG 337 (372)
T ss_dssp SHHHHHHHS-CSCC--CEEEECCCEEEECTT----------SCCCEEEETTEEEEEEECCCCS
T ss_pred HHHHHHHHC-CCCC--ccceeeEEeeccCCC----------CCeEEecCCCCCCEEEEeCCCc
Confidence 899999999 7776 678899999999999 689998764 78999988543
No 17
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.95 E-value=1.7e-27 Score=229.89 Aligned_cols=306 Identities=15% Similarity=0.078 Sum_probs=188.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCeEEEEeccCCCCCCccCCCC-cc-cchhhhhHHhhhccCcchHHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTK-LI-HGGVRYLEKAVFNLDYGQLKLVFHALEE 145 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~~~~g~s~~~~g-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (442)
.++||||||||++|+++|++|+++ |++|+|||+...+.++|+.+++ .+ .... + ......+..+.+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~-~--------~~~~~~l~~~~~~~ 105 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQD-I--------PAGQEAQAEWTREQ 105 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGG-C--------CTTCHHHHHHHHHH
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeeccc-C--------CchHHHHHHHHHHH
Confidence 458999999999999999999999 9999999999877777776666 33 1110 0 00011111111111
Q ss_pred HHHHHHh--CCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccc-cCCceeEE
Q 013476 146 RKQVIRN--APHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAK-DRSLKGAV 222 (442)
Q Consensus 146 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~ 222 (442)
+...... ...+.. ...+. ..+.. +..+ +++.++....+|.+..... .....+.+
T Consensus 106 ~~~~~~~~~~~~~~~-~g~l~----------------~~~~~-~~~g-----~l~~~~~~~~~p~~~~~~~~~~~~~~~~ 162 (405)
T 3c4n_A 106 LLGALGSGKTLEVED-RPLLH----------------LLPAG-EGSG-----LTPTLDALADFPEALALLDPARLPVARV 162 (405)
T ss_dssp HHTGGGSSCCCCEEE-CCEEE----------------EESSC-CSSS-----CEEHHHHTTTCHHHHTTSCTTTSCEEEE
T ss_pred HHHHhCCCCCCcEEe-eCeEE----------------ehhhH-hHCC-----CCCHHHHHHhCCCccccccCCcceEEEE
Confidence 1110000 000000 00000 00000 0111 3445555445554400000 12233444
Q ss_pred EeeCcccChHHHHHHHHHHHHHcCceEecCeEEE---------EEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccC
Q 013476 223 VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVI---------SLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 293 (442)
Q Consensus 223 ~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~---------~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG 293 (442)
.+..+.+++..++..|.+.+++.|++++++++|+ +|..+++ ++ +|.+ .. ..+.||.||+|+|
T Consensus 163 ~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~--~v-~v~~-----~~-g~i~a~~VV~A~G 233 (405)
T 3c4n_A 163 DPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNT--HQ-IVVH-----ET-RQIRAGVIIVAAG 233 (405)
T ss_dssp ETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CB-----CC-EEEEEEEEEECCG
T ss_pred cCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCC--eE-EEEE-----CC-cEEECCEEEECCC
Confidence 5668899999999999999999999999999999 8877663 44 4433 12 3799999999999
Q ss_pred CChHHHhh-hhCCCCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEecCC-cEEEccCCC--CCCCC-----
Q 013476 294 PFCDSVRK-LADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLG-RTVAGTTDS--DTVIT----- 364 (442)
Q Consensus 294 ~~s~~l~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g-~~~~g~~~~--~~~~~----- 364 (442)
.|+..|++ .+|+.. ++.|.+|+++.+...... ..+++. + ..+|++|+.+ .+++|++.. .....
T Consensus 234 ~~s~~l~~~~~g~~~--~~~~~~g~~~~~~~~~~~-~~~~~~----~-~~~y~~p~~~g~~~~G~t~~~~~~~~~~~~~~ 305 (405)
T 3c4n_A 234 AAGPALVEQGLGLHT--RHGRAYRQFPRLDLLSGA-QTPVLR----A-SGLTLRPQNGGYTLVPAIHHRDPHGYHPAGGS 305 (405)
T ss_dssp GGHHHHHHHHHCCCC--CCEEEEEECCEECSCCCT-TCCEEE----E-TTEEEEEETTEEEEECCCCSCBCSSCCCCCCC
T ss_pred ccHHHHHHHhcCCCC--CcccceeEEEEECCCCcc-CCCeEE----C-CcEEEEEcCCCeEEEeccccccccCcCccccc
Confidence 99988998 888764 578889987777542211 112222 1 2478999754 567777643 21111
Q ss_pred ---CCCCCCHHHHHHHHHHhhhhcCCCCCCCC---------eeeeeeeccccccCCCCCCCCCcccceeeEecCCCeEEE
Q 013476 365 ---LLPEPHEDEIQFILDAISDYLNVKVRRTD---------VLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTI 432 (442)
Q Consensus 365 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~~~~~~~~ 432 (442)
.+...+.+.++.+++.+ +++ |.+...+ +.+.|+|+||+|+| +.|+|...++|+|++
T Consensus 306 ~~~~~~~~~~~~~~~l~~~~-~~~-P~l~~~~~~~~r~~~~i~~~w~G~r~~t~D----------~~P~ig~~~~gl~~a 373 (405)
T 3c4n_A 306 LTGVPTGLRRELLEDLVGLM-DAV-PALAGEGLELGRSSADVPGAWLALPGGRPD----------APPQAEELAPGLHLL 373 (405)
T ss_dssp BTTBCCSSCHHHHHHHHHHT-TTC-GGGGSSCBCCCSSGGGSCEEEEEEGGGCTT----------CCCEEEEEETTEEEE
T ss_pred ccccccCCCHHHHHHHHHHH-HhC-CCccccCccccccccceeeEEEeecCcCCC----------CCCEecccCCCeEEE
Confidence 11234566777777664 777 7776654 88899999999999 689999877999999
Q ss_pred eccc
Q 013476 433 TGGK 436 (442)
Q Consensus 433 ~gg~ 436 (442)
+|..
T Consensus 374 ~G~~ 377 (405)
T 3c4n_A 374 LGGP 377 (405)
T ss_dssp ECCT
T ss_pred EccC
Confidence 8875
No 18
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.95 E-value=2.7e-28 Score=231.22 Aligned_cols=294 Identities=13% Similarity=0.085 Sum_probs=194.7
Q ss_pred cEEEECCChHHHHHHHHHHHCC------CeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHH
Q 013476 73 DILVIGGGATGCGVALDAATRG------LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G------~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (442)
||||||||++|+++|++|+++| ++|+|||+...++++|.+++|++.+.... ........+..+.+...
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~ 75 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSD------PNNPQEADWSQQTFDYL 75 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSC------CSCTHHHHHHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeecccCC------CchHHHHHHHHHHHHHH
Confidence 8999999999999999999998 99999999988888999999988652210 00000111111111111
Q ss_pred HHHHH------hCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCcee
Q 013476 147 KQVIR------NAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKG 220 (442)
Q Consensus 147 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 220 (442)
..... .......... ....... ..++ +..+.+ .++++.+++ ..+|.+ .+
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~-~~~~~~~------------~~~~-~~~~~~-~~~l~~~e~-~~~p~~---------~~ 130 (351)
T 3g3e_A 76 LSHVHSPNAENLGLFLISGYN-LFHEAIP------------DPSW-KDTVLG-FRKLTPREL-DMFPDY---------GY 130 (351)
T ss_dssp HTTTTSTTHHHHTEEEEEEEE-EESSCCC------------CCGG-GGTSEE-EEECCHHHH-TTCTTC---------CE
T ss_pred HHHhhccCCCCccEEEEEEEE-EecCCcc------------ccCH-HHhCCC-ceECCHHHh-ccCCCC---------ce
Confidence 11000 0000000000 0000000 0111 133443 678888877 344433 34
Q ss_pred EEEeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHh
Q 013476 221 AVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVR 300 (442)
Q Consensus 221 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~ 300 (442)
+++..++.++|..++..|.+.++++|++|+. ++|++|..++ .++||.||+|||.|+..|+
T Consensus 131 ~~~~~~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------------~~~a~~VV~A~G~~s~~l~ 190 (351)
T 3g3e_A 131 GWFHTSLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------------REGADVIVNCTGVWAGALQ 190 (351)
T ss_dssp EEEEEEEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------------HTTCSEEEECCGGGGGGTS
T ss_pred EEEecceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------------cCCCCEEEECCCcChHhhc
Confidence 4554578999999999999999999999987 8887664321 1568999999999998876
Q ss_pred hhhCCCCCCcccCCCeeEEEeCCCCCCCCceEEeee---cCCCcEEEEEecCCcEEEccCCCCCCCCCCCCCCHHHHHHH
Q 013476 301 KLADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPK---TKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFI 377 (442)
Q Consensus 301 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~ 377 (442)
+. .++.|.+|+++.++... . .. .++.. ..++..+|++|..+++++|++.+. ...+..++++..+.+
T Consensus 191 ~~------~~l~p~rg~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~y~~p~~~~~~iGg~~~~--~~~~~~~~~~~~~~l 259 (351)
T 3g3e_A 191 RD------PLLQPGRGQIMKVDAPW-M-KH-FILTHDPERGIYNSPYIIPGTQTVTLGGIFQL--GNWSELNNIQDHNTI 259 (351)
T ss_dssp CC------TTCEEEEEEEEEEECTT-C-CS-EEEECCTTTCTTCSCEEEECSSCEEEECCCEE--TCCCCSCCHHHHHHH
T ss_pred CC------CceeecCCcEEEEeCCC-c-ce-EEEeccccCCCCceeEEEeCCCcEEEeeeeec--CCCCCCCCHHHHHHH
Confidence 52 47899999988886532 1 22 22221 122345899998779999998765 334567888999999
Q ss_pred HHHhhhhcCCCCCCCCeeeeeeeccccccCCCCCCCCCcccceeeEec--CCCeEEEeccc
Q 013476 378 LDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED--FPGLVTITGGK 436 (442)
Q Consensus 378 ~~~~~~~~~~~l~~~~~~~~~~G~r~~t~D~~~~~~~~~~~~~~i~~~--~~~~~~~~gg~ 436 (442)
++.+.+++ |.+...++.+.|+|+||+|+| .. ...++|..+ .++++.++|-.
T Consensus 260 ~~~~~~~~-P~l~~~~i~~~w~G~r~~t~D-~p------~~~~~ig~~~~~~~~~~~~G~~ 312 (351)
T 3g3e_A 260 WEGCCRLE-PTLKNARIIGERTGFRPVRPQ-IR------LEREQLRTGPSNTEVIHNYGHG 312 (351)
T ss_dssp HHHHHHHC-GGGGGCEEEEEEEEEEEECSS-CE------EEEEEECCSSSCEEEEEEECCT
T ss_pred HHHHHHhC-CCccCCcEeeeeEeeCCCCCC-cc------ceeeeccCCCCCCeEEEEeCCC
Confidence 99999999 888888999999999999998 20 013456654 37888888743
No 19
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.94 E-value=4e-26 Score=217.26 Aligned_cols=275 Identities=17% Similarity=0.132 Sum_probs=172.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCc-----cCCCCcccchhhhhHHhhhccCcchHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTS-----SRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALE 144 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (442)
.++||+|||||++|+++|++|+++|++|+||||..++.++| ..+++.+...... ........+..+.+.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~------~~~~~~~~~~~~~~~ 78 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTL------TDGPRQAKWEESTFK 78 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCT------TTCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccC------CCchHHHHHHHHHHH
Confidence 46899999999999999999999999999999998766543 3333333221100 000011111111122
Q ss_pred HHHHHHHh-CC-cccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEE
Q 013476 145 ERKQVIRN-AP-HLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAV 222 (442)
Q Consensus 145 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 222 (442)
........ .. ....... +.. .... ...+++ +..+.+ .+.++.+++ |.. ..++
T Consensus 79 ~~~~~~~~~~g~~~~~~~~-~~~--~~~~--------~~~~~~-~~~g~~-~~~l~~~~~----p~~---------~~g~ 132 (363)
T 1c0p_A 79 KWVELVPTGHAMWLKGTRR-FAQ--NEDG--------LLGHWY-KDITPN-YRPLPSSEC----PPG---------AIGV 132 (363)
T ss_dssp HHHHHTTTTSSEEEEEEEE-EES--SGGG--------GGGGTT-TTTSTT-CEECCGGGS----STT---------CEEE
T ss_pred HHHHhCcccCCeEEECCEE-EEe--cCcc--------chhHHH-HHhCCC-cEECCHHHC----CCc---------eEEE
Confidence 21111110 00 0000000 000 0000 111222 133433 555655443 211 1233
Q ss_pred EeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhh
Q 013476 223 VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKL 302 (442)
Q Consensus 223 ~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~ 302 (442)
.+..+.++|..++..|.+.++++|++|+. ++|++|..+ . + .||.||+|+|.|+..|...
T Consensus 133 ~~~~~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------------~--~-~a~~VV~A~G~~s~~l~~~ 191 (363)
T 1c0p_A 133 TYDTLSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------------F--D-GADLVVNATGLGAKSIAGI 191 (363)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------------C--S-SCSEEEECCGGGGGTSBTT
T ss_pred EEecceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------------C--c-CCCEEEECCCcchhhccCc
Confidence 33677899999999999999999999987 888776431 0 1 7899999999999887764
Q ss_pred hCCCCCCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEec-CCcEEEccCCCCCCCCCCCCCCHHHHHHHHHHh
Q 013476 303 ADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFILDAI 381 (442)
Q Consensus 303 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (442)
...++.|++|+++.++... +. .. ++...++...|++|. +|++++|++.+.. ..+..++++..+.+++.+
T Consensus 192 ----~~~~~~p~rg~~~~~~~~~-~~--~~-~~~~~~~~~~y~~p~~~g~~~iG~t~~~~--~~~~~~~~~~~~~l~~~~ 261 (363)
T 1c0p_A 192 ----DDQAAEPIRGQTVLVKSPC-KR--CT-MDSSDPASPAYIIPRPGGEVICGGTYGVG--DWDLSVNPETVQRILKHC 261 (363)
T ss_dssp ----CCTTEEEEEEEEEEEECCC-CC--CE-EECSCTTCCEEEEEETTTEEEEECCCEET--CCCCSCCHHHHHHHHHHH
T ss_pred ----ccCCccccCCeEEEEeCCc-cc--ce-EeeccCCCcEEEEEcCCCEEEEEeeeccC--CCCCCCCHHHHHHHHHHH
Confidence 2347999999988886543 11 11 221223233889997 5688999987653 345677888999999999
Q ss_pred hhhcCCCC------CCCCeeeeeeeccccccCC
Q 013476 382 SDYLNVKV------RRTDVLSAWSGIRPLAMDP 408 (442)
Q Consensus 382 ~~~~~~~l------~~~~~~~~~~G~r~~t~D~ 408 (442)
.+++ |.+ ...++.+.|+|+||+|+|+
T Consensus 262 ~~~~-P~l~~~~~~~~~~i~~~w~G~rp~t~d~ 293 (363)
T 1c0p_A 262 LRLD-PTISSDGTIEGIEVLRHNVGLRPARRGG 293 (363)
T ss_dssp HHHC-GGGSSSSSGGGCEEEEEEEEEEEEETTS
T ss_pred HHhC-ccccCCcccccceEeeceEEECCCCCCC
Confidence 9999 777 4478899999999999993
No 20
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.78 E-value=2e-18 Score=171.10 Aligned_cols=204 Identities=19% Similarity=0.176 Sum_probs=118.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccc--hhhhhHHhhhccCcchHHHHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHG--GVRYLEKAVFNLDYGQLKLVFHALEER 146 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (442)
+.++||||||+|++|+++|++|+++|++|+||||....++++..+.|.++. +.......... ...+.+.+.+...
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~---ds~~~~~~~~~~~ 115 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFD---DSPENMKTFMMAA 115 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCC---CCHHHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCC---CCHHHHHHHHHHH
Confidence 456999999999999999999999999999999998777888877776542 23322221111 1222222222111
Q ss_pred HHHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCccee-cCHhhH-------------HhhCCccccc
Q 013476 147 KQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRY-YSAQES-------------AELFPTLAMK 212 (442)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-------------~~~~p~~~~~ 212 (442)
.... ........+...+.+..+|+. ..|++.... ...... ...++...
T Consensus 116 ------~~~~---------~~~~~~~~~~~~~~~~i~~l~-~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~-- 177 (510)
T 4at0_A 116 ------LGPG---------ADEEKITDYCEGSVEHYNWLV-DCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNE-- 177 (510)
T ss_dssp ------SCSS---------CCHHHHHHHHHTHHHHHHHHH-HTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGG--
T ss_pred ------hCCC---------CCHHHHHHHHHhhHHHHHHHH-HcCCeecccccCCcccccCCcccccccCccccccccc--
Confidence 0000 001111122222334556664 344431110 000000 00000000
Q ss_pred cccCCceeEEEee-----CcccChH-HHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEc-
Q 013476 213 AKDRSLKGAVVYY-----DGQMNDS-RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYA- 285 (442)
Q Consensus 213 ~~~~~~~~~~~~~-----~~~~~~~-~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a- 285 (442)
............ .+..... .++..|.+.+++.|++|+++++|++|+.+++| +|+||++.+ +++..+|+|
T Consensus 178 -~~~~~~r~~~~~~~~~~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g-~v~GV~~~~--~g~~~~i~A~ 253 (510)
T 4at0_A 178 -IAAPAPRGHVPQMDGKRTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTG-RVVGIVAKQ--YGKEVAVRAR 253 (510)
T ss_dssp -TSCCCCCEECCCCSSCBTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTC-CEEEEEEEE--TTEEEEEEEE
T ss_pred -ccCcccceeeecccccccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCC-cEEEEEEEE--CCcEEEEEeC
Confidence 000000111110 2223333 78999999999999999999999999998557 999999985 455568999
Q ss_pred CEEEEccCCChH
Q 013476 286 KVVVNAAGPFCD 297 (442)
Q Consensus 286 ~~VVlAtG~~s~ 297 (442)
|.||+|||+|+.
T Consensus 254 k~VVlAtGG~~~ 265 (510)
T 4at0_A 254 RGVVLATGSFAY 265 (510)
T ss_dssp EEEEECCCCCTT
T ss_pred CeEEEeCCChhh
Confidence 599999999984
No 21
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.76 E-value=3.7e-17 Score=164.02 Aligned_cols=196 Identities=16% Similarity=0.131 Sum_probs=122.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHH
Q 013476 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 68 ~~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (442)
++.++||||||+|++|+++|+.|+++|++|+||||....++.+..+++.++.......... ... ...+.++..+....
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~-g~~-ds~~~~~~~~~~~~ 195 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAH-GVE-DKVEWFIEDAMKGG 195 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCC-CCHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHh-CCC-CCHHHHHHHHHHhc
Confidence 4667999999999999999999999999999999998767777777666543221111110 011 12222222111110
Q ss_pred HHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEEEeeCc
Q 013476 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 227 (442)
. .. ........+........+|+. ..|++ +..+. .+.. ......+.+.++
T Consensus 196 ~------~~---------~~~~~~~~~~~~~~~~i~~l~-~~Gv~-~~~~~------~~~g-------~~~~r~~~~~~~ 245 (566)
T 1qo8_A 196 R------QQ---------NDIKLVTILAEQSADGVQWLE-SLGAN-LDDLK------RSGG-------ARVDRTHRPHGG 245 (566)
T ss_dssp T------TC---------SCHHHHHHHHHHHHHHHHHHH-HTTCC-CCEEE------CCTT-------CSSCCEEECSSS
T ss_pred C------CC---------CCHHHHHHHHhccHHHHHHHH-hcCCc-ccccc------ccCC-------CCCCceeecCCC
Confidence 0 00 000111111222334556664 44554 22111 0000 111122333344
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
.++...+...|.+.+++.|++|+++++|++|+.++++ +|+||++.+ .+|+...++||.||+|||+|+.
T Consensus 246 ~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g-~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 246 KSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH-SVVGAVVHG-KHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS-BEEEEEEEE-TTTEEEEEEEEEEEECCCCCTT
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC-cEEEEEEEe-CCCcEEEEEcCEEEEecCCccc
Confidence 5667889999999999999999999999999987646 999999975 4665567999999999999985
No 22
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.75 E-value=8e-17 Score=161.84 Aligned_cols=195 Identities=16% Similarity=0.167 Sum_probs=120.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchh-hhhHHhhhccCcchHHHHHHHHHHH
Q 013476 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGV-RYLEKAVFNLDYGQLKLVFHALEER 146 (442)
Q Consensus 68 ~~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (442)
++.++||||||||++|+++|+.|+++|++|+||||....++.+..+++.+.... ......... ...+.+...+..
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~---ds~~~~~~~~~~- 198 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKIT---DSPELMFEDTMK- 198 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCC---CCHHHHHHHHHH-
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCC---CCHHHHHHHHHH-
Confidence 455799999999999999999999999999999999876677666665543322 111111111 111111111110
Q ss_pred HHHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEEEeeC
Q 013476 147 KQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYD 226 (442)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 226 (442)
..... ........+........+|+. ..|++ +..+. ... .......+.+.+
T Consensus 199 -----~g~~~---------~~~~~~~~~~~~~~~~~~~l~-~~Gv~-~~~~~------~~~-------g~~~~r~~~~~~ 249 (571)
T 1y0p_A 199 -----GGQNI---------NDPALVKVLSSHSKDSVDWMT-AMGAD-LTDVG------MMG-------GASVNRAHRPTG 249 (571)
T ss_dssp -----HTTTC---------SCHHHHHHHHHHHHHHHHHHH-HTTCC-CCEEE------CCT-------TCSSCCEEESTT
T ss_pred -----hcCCC---------CCHHHHHHHHHccHHHHHHHH-hcCCC-CccCc------ccC-------CcCCCeeEecCC
Confidence 00000 000111112222334556664 35554 21100 000 011122223334
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
+...+..+...|.+.+++.|++|+++++|++|+.+++| +|+||++.+ .+|+..++.||.||+|||+|+.
T Consensus 250 g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g-~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 250 GAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG-TVKGILVKG-MYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp TCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS-CEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC-eEEEEEEEe-CCCcEEEEECCeEEEeCCCccc
Confidence 44566789999999999999999999999999987656 999999975 4566668999999999999985
No 23
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.74 E-value=2.6e-17 Score=158.20 Aligned_cols=167 Identities=18% Similarity=0.186 Sum_probs=106.2
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
.++...+...|.+.+++.|++++++++|+++..++ + +++||++.+ .+....+.||.||.|+|.+| .+.+.+|+..
T Consensus 98 ~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~-~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s-~~~~~~g~~~ 172 (397)
T 3cgv_A 98 VLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-G-KVAGAKIRH--NNEIVDVRAKMVIAADGFES-EFGRWAGLKS 172 (397)
T ss_dssp EECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-T-EEEEEEEEE--TTEEEEEEEEEEEECCCTTC-HHHHHHTCCT
T ss_pred EEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-C-EEEEEEEEE--CCeEEEEEcCEEEECCCcch-HhHHhcCCCc
Confidence 46778899999999999999999999999999886 5 898898864 34456899999999999999 7888887764
Q ss_pred -CC-cccCCCeeEEEeCC-CCCCCCceEEeeecCCCcEEEEEecCC-cEEEccCCCCCCCCCCCCCCHHHHHHHHHHhhh
Q 013476 308 -QP-MICPSSGVHIVLPD-YYSPEGMGLIVPKTKDGRVVFMLPWLG-RTVAGTTDSDTVITLLPEPHEDEIQFILDAISD 383 (442)
Q Consensus 308 -~~-~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~g-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (442)
.. +.....+....+.. ...+.....++....++...|++|..+ ...++...... .........+.++.+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~-----~~~~~~~~~~~l~~~~~ 247 (397)
T 3cgv_A 173 VILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSIN-----WIHNRFELKNYLDRFIE 247 (397)
T ss_dssp TCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETT-----TCSCHHHHHHHHHHHHH
T ss_pred cCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccc-----cccCCCCHHHHHHHHHH
Confidence 21 11111122222322 222221122221113455788999754 55666554321 11233444555555544
Q ss_pred hcCCCCCCCCeeeeeeeccccc
Q 013476 384 YLNVKVRRTDVLSAWSGIRPLA 405 (442)
Q Consensus 384 ~~~~~l~~~~~~~~~~G~r~~t 405 (442)
.+ +.+...++...|.+.+|++
T Consensus 248 ~~-~~~~~~~~~~~~~~~~p~~ 268 (397)
T 3cgv_A 248 NH-PGLKKGQDIQLVTGGVSVS 268 (397)
T ss_dssp TC-HHHHTSEEEEEEEEEEECC
T ss_pred hC-cCCCCCeEEeeeeeeeecC
Confidence 44 4445566778888888875
No 24
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.71 E-value=1.8e-16 Score=152.13 Aligned_cols=167 Identities=18% Similarity=0.199 Sum_probs=101.9
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
.++...+...|.+.+++.|++++++++++.+..++ + +++++.... +++..+++||.||.|+|..| .+.+.+|+..
T Consensus 98 ~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~-~~~~v~~~~--~~~~~~~~a~~vIgAdG~~S-~vr~~~g~~~ 172 (397)
T 3oz2_A 98 VLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-G-KVAGAKIRH--NNEIVDVRAKMVIAADGFES-EFGRWAGLKS 172 (397)
T ss_dssp EECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-T-EEEEEEEEE--TTEEEEEEEEEEEECCCTTC-HHHHHHTCGG
T ss_pred EEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-c-eeeeeeecc--cccceEEEEeEEEeCCcccc-HHHHHcCCCc
Confidence 35677888899999999999999999999999887 4 888887764 55667899999999999998 5788777653
Q ss_pred CCcccCCCeeE--EE---eCCCCCCCCceEEeeecCCCcEEEEEecCC-cEEEccCCCCCCCCCCCCCCHHHHHHHHHHh
Q 013476 308 QPMICPSSGVH--IV---LPDYYSPEGMGLIVPKTKDGRVVFMLPWLG-RTVAGTTDSDTVITLLPEPHEDEIQFILDAI 381 (442)
Q Consensus 308 ~~~~~~~~g~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (442)
. ..+..... .. ......+......+.....+...+++|..+ ...+|..... +........+..++.+
T Consensus 173 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~-----~~~~~~~~~~~~l~~~ 245 (397)
T 3oz2_A 173 V--ILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSI-----NWIHNRFELKNYLDRF 245 (397)
T ss_dssp G--CCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEET-----TTSCSHHHHHHHHHHH
T ss_pred c--cccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeecc-----chhhhhhhHHHHHHHH
Confidence 2 11222111 11 112222222222222123344677778644 4444433211 1122344455555555
Q ss_pred hhhcCCCCCCCCeeeeeeeccccccC
Q 013476 382 SDYLNVKVRRTDVLSAWSGIRPLAMD 407 (442)
Q Consensus 382 ~~~~~~~l~~~~~~~~~~G~r~~t~D 407 (442)
.+.. |.+........+.+..|+...
T Consensus 246 ~~~~-~~l~~~~~~~~~~~~~~~~~~ 270 (397)
T 3oz2_A 246 IENH-PGLKKGQDIQLVTGGVSVSKV 270 (397)
T ss_dssp HHTC-HHHHTSEEEEEEEEEEECCCC
T ss_pred HHhC-ccccccceeeeeeccccccCc
Confidence 4444 455555566677777776544
No 25
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.69 E-value=4.6e-16 Score=157.24 Aligned_cols=202 Identities=16% Similarity=0.166 Sum_probs=113.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHH-HHHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEERKQ 148 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 148 (442)
.++||||||||++||+||++|+++|++|+||||....++.|..+.|.+......... . ...+... +.+.+..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~-g---~~ds~~~~~~dt~~~--- 76 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKM-S---DGDNEDLHFMDTVKG--- 76 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGG-G---TTCCHHHHHHHHHHH---
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCccc-C---CCCCHHHHHHHHHHh---
Confidence 458999999999999999999999999999999976555554443333221111000 0 0111111 1111110
Q ss_pred HHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcc----------------eecCHhhHHhhCCccccc
Q 013476 149 VIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLS----------------RYYSAQESAELFPTLAMK 212 (442)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----------------~~~~~~~~~~~~p~~~~~ 212 (442)
.... +.......+...+.+..+++. ..|++.. ++++.++....++.-..
T Consensus 77 ----g~~~---------~d~~~v~~~~~~s~~~i~~L~-~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~- 141 (660)
T 2bs2_A 77 ----SDWG---------CDQKVARMFVNTAPKAIRELA-AWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDF- 141 (660)
T ss_dssp ----TTTC---------SCHHHHHHHHHHHHHHHHHHH-HTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCC-
T ss_pred ----cCCC---------CCHHHHHHHHHHHHHHHHHHH-HcCCCceecCCCcccccccccccccccchhhhhhhccccc-
Confidence 0000 001111112222334555554 4444311 12222222211110000
Q ss_pred cccCCceeEEEeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEcc
Q 013476 213 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 292 (442)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAt 292 (442)
.........+ ........++..|.+.+++.|++|+++++|++|+.++ | +|+||++.+..+|+...+.||.||+||
T Consensus 142 -gg~~~~R~~~--~~d~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g-~v~Gv~~~~~~~G~~~~i~A~~VVlAT 216 (660)
T 2bs2_A 142 -GGTKKWRTCY--TADATGHTMLFAVANECLKLGVSIQDRKEAIALIHQD-G-KCYGAVVRDLVTGDIIAYVAKGTLIAT 216 (660)
T ss_dssp -TTCSSCCEEC--STTCHHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET-T-EEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred -cccccceeEe--eCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEecC-C-EEEEEEEEECCCCcEEEEEcCEEEEcc
Confidence 0000000110 0111245788999999999999999999999999866 6 999999876446666679999999999
Q ss_pred CCChHH
Q 013476 293 GPFCDS 298 (442)
Q Consensus 293 G~~s~~ 298 (442)
|+++..
T Consensus 217 GG~~~~ 222 (660)
T 2bs2_A 217 GGYGRI 222 (660)
T ss_dssp CCCGGG
T ss_pred Ccchhh
Confidence 999854
No 26
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.68 E-value=3.7e-16 Score=151.39 Aligned_cols=127 Identities=16% Similarity=0.175 Sum_probs=80.7
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
..+++..+...|.+.+++.|++++++++|+++..++++ .+ |.+.. .+|+..++.||.||+|+|.++ .+.+.+|+.
T Consensus 101 ~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~-~~--v~v~~-~~g~~~~~~a~~vV~A~G~~s-~l~~~~g~~ 175 (421)
T 3nix_A 101 WQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTD-SV--TTIED-INGNKREIEARFIIDASGYGR-VIPRMFGLD 175 (421)
T ss_dssp EECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTE-EE--EEEEE-TTSCEEEEEEEEEEECCGGGC-HHHHHTTCE
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EE--EEEEc-CCCCEEEEEcCEEEECCCCch-hhHHhcCCC
Confidence 35778899999999999999999999999999988754 33 44444 456656799999999999998 777888776
Q ss_pred CCCcccCCCeeEEEeCCCCC-----CCCceEEeeecCCCcEEEEEecCC-cEEEccCC
Q 013476 307 VQPMICPSSGVHIVLPDYYS-----PEGMGLIVPKTKDGRVVFMLPWLG-RTVAGTTD 358 (442)
Q Consensus 307 ~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~g-~~~~g~~~ 358 (442)
.+............+..... .......+.....+..+|++|..+ ...+|...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~ 233 (421)
T 3nix_A 176 KPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVG 233 (421)
T ss_dssp ECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEE
T ss_pred CCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEe
Confidence 43222222222222222111 111122221122344688899754 55565543
No 27
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.67 E-value=7.2e-16 Score=154.62 Aligned_cols=203 Identities=12% Similarity=0.051 Sum_probs=113.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHH-HHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEERK 147 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 147 (442)
+.++||||||||++|+++|+.|+++|++|+||||....++.+..+.|.+....... ..+.... +.+.+..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~-------~~ds~~~~~~d~~~~-- 75 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT-------HEDNWEWHMYDTVKG-- 75 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSS-------SCCCHHHHHHHHHHH--
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCC-------CCCCHHHHHHHHHHh--
Confidence 34589999999999999999999999999999999755445544433322111000 0111111 1111100
Q ss_pred HHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHH-hhCCccccccccCCceeEEEeeC
Q 013476 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESA-ELFPTLAMKAKDRSLKGAVVYYD 226 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~ 226 (442)
...+ ........+...+....+++. ..|++ +......... ..++..............++.
T Consensus 76 -----g~~~---------~d~~~v~~~~~~~~~~i~~l~-~~Gv~-f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~-- 137 (588)
T 2wdq_A 76 -----SDYI---------GDQDAIEYMCKTGPEAILELE-HMGLP-FSRLDDGRIYQRPFGGQSKNFGGEQAARTAAA-- 137 (588)
T ss_dssp -----TTTC---------SCHHHHHHHHHHHHHHHHHHH-HTTCC-CCBCTTSSBCEECCTTCBSTTTCSBCCCEECS--
T ss_pred -----cCCC---------CCHHHHHHHHHhHHHHHHHHH-HcCCC-cccCCCCcEeeeecCCccccccccCcceEEEc--
Confidence 0000 000111111222234555654 45654 2221111000 001100000000001111111
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHH
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l 299 (442)
.......++..|.+.+++.|++|+++++|++|+.++++ +|+||++.+..+|+...+.||.||+|||+++...
T Consensus 138 ~d~~g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g-~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y 209 (588)
T 2wdq_A 138 ADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDG-AVVGCTALCIETGEVVYFKARATVLATGGAGRIY 209 (588)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCC-EEEEEEEEEcCCCeEEEEEcCEEEECCCCCcccc
Confidence 11224678899999999999999999999999986346 9999998764456666899999999999998643
No 28
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.67 E-value=7.1e-16 Score=154.83 Aligned_cols=196 Identities=11% Similarity=0.021 Sum_probs=114.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHH-HHHHHHHHH
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLV-FHALEERKQ 148 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 148 (442)
.++||||||+|++||+||+.|+++|++|+||||....++.|..+.|.+...... ...++.... .+.+.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~-------~~~ds~~~~~~dtl~---- 85 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGN-------MEDDNWRWHFYDTVK---- 85 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCS-------SSCCCHHHHHHHHHH----
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCC-------CCCCCHHHHHHHHHH----
Confidence 358999999999999999999999999999999876555554444433321110 001121111 11111
Q ss_pred HHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHH-hhCCccccccccC-----CceeEE
Q 013476 149 VIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESA-ELFPTLAMKAKDR-----SLKGAV 222 (442)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~p~~~~~~~~~-----~~~~~~ 222 (442)
....+ ........+...+.+..+++. ..|++ +.......+. ..++.. ..+ ......
T Consensus 86 ---~g~~l---------~d~~~v~~l~~~s~~~i~~L~-~~Gv~-f~~~~~g~~~~~~~gg~----s~~~g~~~~~~R~~ 147 (621)
T 2h88_A 86 ---GSDWL---------GDQDAIHYMTEQAPAAVIELE-NYGMP-FSRTEEGKIYQRAFGGQ----SLQFGKGGQAHRCC 147 (621)
T ss_dssp ---HTTTC---------SCHHHHHHHHHHHHHHHHHHH-HTTCC-CCBCTTSSBCEECCTTC----BSTTTTSCBCCCEE
T ss_pred ---hcCCC---------CCHHHHHHHHHHHHHHHHHHH-HcCCC-cccCCCCceeccccCcc----cccccCCCcceeEE
Confidence 00000 001111112222334556664 45665 2221111010 011111 000 000111
Q ss_pred EeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH
Q 013476 223 VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (442)
Q Consensus 223 ~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~ 298 (442)
+. .......++..|.+.+++.|++|+++++|++|+.++ | +|+||++.+..+|+...+.||.||+|||+++..
T Consensus 148 ~~--~d~tG~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g-~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 148 CV--ADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-G-ECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp CS--TTCHHHHHHHHHHHHHTTSCCEEEETEEEEEEEEET-T-EEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred Ee--cCCCHHHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-C-EEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 11 111245788999999999999999999999999876 6 999999976456766789999999999999864
No 29
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.67 E-value=1.2e-15 Score=152.87 Aligned_cols=194 Identities=16% Similarity=0.170 Sum_probs=115.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchh-hhhHHhhhccCcchHHHHHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGV-RYLEKAVFNLDYGQLKLVFHALEERK 147 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (442)
+.++||+|||+|++|+++|+.|+++|++|+||||....++.+..+++.+.... ......... ...+.+.+.+....
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~---ds~~~~~~~~~~~g 200 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIE---DKKQIMIDDTMKGG 200 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCC---CCTHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCC---CCHHHHHHHHHHhc
Confidence 45689999999999999999999999999999999866666666665543221 111111011 11111212111110
Q ss_pred HHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEEEeeCc
Q 013476 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (442)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 227 (442)
. .. ........+........+|+. ..|++ +..+. .... ......+.+.++
T Consensus 201 ~------~~---------~~~~~v~~~~~~~~~~i~~l~-~~Gv~-~~~~~------~~gg-------~~~~r~~~~~~~ 250 (572)
T 1d4d_A 201 R------NI---------NDPELVKVLANNSSDSIDWLT-SMGAD-MTDVG------RMGG-------ASVNRSHRPTGG 250 (572)
T ss_dssp T------TC---------SCHHHHHHHHHTHHHHHHHHH-HHTCC-CCEEE------CCTT-------CSSCCEEESTTT
T ss_pred C------CC---------CCHHHHHHHHHccHHHHHHHH-hcCCc-ccccc------ccCC-------CcCCeeEecCCC
Confidence 0 00 000011111122234555654 33544 21110 0000 111112222233
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
......+...|.+.+++.|++|+++++|++|+.+++| +|+||++.+ .+|+...+.||.||+|||+++.
T Consensus 251 ~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g-~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 251 AGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASG-KVTGVLVKG-EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--C-CEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCC-eEEEEEEEe-CCCcEEEEEcCEEEEeCCCCcc
Confidence 3456788899999999999999999999999887646 999999975 4566668999999999999985
No 30
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.63 E-value=3e-15 Score=148.75 Aligned_cols=193 Identities=17% Similarity=0.139 Sum_probs=97.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHHHHHHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (442)
+.++||||||+|++||++|++|++ |++|+||||....+++|..+.|.+...... .++.+. .+.+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~---------~ds~~~---~~~d~-- 70 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDE---------TDSIDS---HVEDT-- 70 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCS---------HHHHHH---HHHHH--
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCC---------CCCHHH---HHHHH--
Confidence 345999999999999999999999 999999999987666666665544322110 011111 11110
Q ss_pred HHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecC----HhhH-HhhCCccccccccCCceeEEE
Q 013476 149 VIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYS----AQES-AELFPTLAMKAKDRSLKGAVV 223 (442)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~-~~~~p~~~~~~~~~~~~~~~~ 223 (442)
......+ +.......+...+.+..+++. ..|++ +.... .... ...++.. .....++
T Consensus 71 -l~~g~g~---------~d~~~v~~~~~~~~~~i~~l~-~~Gv~-f~~~~~~~~~g~~~~~~~gg~-------~~~r~~~ 131 (540)
T 1chu_A 71 -LIAGAGI---------CDRHAVEFVASNARSCVQWLI-DQGVL-FDTHIQPNGEESYHLTREGGH-------SHRRILH 131 (540)
T ss_dssp -HHHTTTC---------CCHHHHHHHHHHHHHHHHHHH-HTTCC------------------------------------
T ss_pred -HHhhccc---------CCHHHHHHHHHhHHHHHHHHH-HcCCC-cccCcccCcCCcccccccccc-------ccCeEEE
Confidence 0000000 000111112222334556664 55654 22211 0000 0000000 0000011
Q ss_pred eeCcccChHHHHHHHHHHHHH-cCceEecCeEEEEEEE-cCC-----CCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 224 YYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIK-DEA-----SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 224 ~~~~~~~~~~l~~~l~~~~~~-~Gv~i~~~~~v~~l~~-~~~-----g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
. +......++..|.+.+++ .|++|+++++|++|+. +++ + +|+||++.+..+|+...+.||.||+|||+++
T Consensus 132 ~--~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~-~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 132 A--ADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTR-RVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ------------CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSC-BEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred e--CCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCC-EEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 1 112335677888888888 6999999999999998 432 3 7899998763456656899999999999998
Q ss_pred HH
Q 013476 297 DS 298 (442)
Q Consensus 297 ~~ 298 (442)
..
T Consensus 209 ~~ 210 (540)
T 1chu_A 209 KV 210 (540)
T ss_dssp GG
T ss_pred cc
Confidence 53
No 31
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.63 E-value=3.4e-15 Score=148.01 Aligned_cols=75 Identities=27% Similarity=0.389 Sum_probs=63.6
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
.++...+...|.+.+++.|++++++++|++|..++ + +|++|++.+ .+|+..++.||.||+|+|.+| .+.+.+|..
T Consensus 107 ~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~-~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S-~vr~~lg~~ 181 (512)
T 3e1t_A 107 QVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG-E-RAVGVRYRN-TEGVELMAHARFIVDASGNRT-RVSQAVGER 181 (512)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-T-EEEEEEEEC-SSSCEEEEEEEEEEECCCTTC-SSGGGTCCE
T ss_pred EecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-C-EEEEEEEEe-CCCCEEEEEcCEEEECCCcch-HHHHHcCCC
Confidence 46778899999999999999999999999999977 5 899999875 456556899999999999998 577766653
No 32
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.61 E-value=1.8e-14 Score=143.98 Aligned_cols=75 Identities=28% Similarity=0.302 Sum_probs=60.9
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
.++...+...|.+.+++.|++|+++++|+++++++++ |+ |++++ .+|. .+++||.||.|+|.+| .+.+.+|+..
T Consensus 144 ~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~--v~-v~~~~-~~G~-~~~~a~~vV~ADG~~S-~vR~~lGi~~ 217 (570)
T 3fmw_A 144 LVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA--VE-VTVAG-PSGP-YPVRARYGVGCDGGRS-TVRRLAADRF 217 (570)
T ss_dssp CCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC--EE-EEEEE-TTEE-EEEEESEEEECSCSSC-HHHHHTTCCC
T ss_pred EeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe--EE-EEEEe-CCCc-EEEEeCEEEEcCCCCc-hHHHHcCCCC
Confidence 4677889999999999899999999999999988754 43 55543 2332 5899999999999999 7889998875
Q ss_pred C
Q 013476 308 Q 308 (442)
Q Consensus 308 ~ 308 (442)
+
T Consensus 218 ~ 218 (570)
T 3fmw_A 218 P 218 (570)
T ss_dssp C
T ss_pred c
Confidence 4
No 33
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.60 E-value=5.4e-14 Score=140.34 Aligned_cols=77 Identities=22% Similarity=0.256 Sum_probs=60.6
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEE--EEEECCCCceEEEEcCEEEEccCCChHHHhhhhC
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGA--RIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV--~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g 304 (442)
..++...+...|.+.+++.|++|+++++|+++++++++ ++.+| ++.+ .++ ..+++||.||.|+|.+| .+.+.+|
T Consensus 115 ~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~-~~~~v~v~~~~-~~~-~~~i~a~~vV~AdG~~S-~vR~~lg 190 (535)
T 3ihg_A 115 AMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDD-AGAGVTARLAG-PDG-EYDLRAGYLVGADGNRS-LVRESLG 190 (535)
T ss_dssp BCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGG-GCSEEEEEEEE-TTE-EEEEEEEEEEECCCTTC-HHHHHTT
T ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCC-ccccEEEEEEc-CCC-eEEEEeCEEEECCCCcc-hHHHHcC
Confidence 34677888999999999999999999999999988753 33333 3433 222 46899999999999999 7899888
Q ss_pred CCC
Q 013476 305 QNV 307 (442)
Q Consensus 305 ~~~ 307 (442)
+..
T Consensus 191 i~~ 193 (535)
T 3ihg_A 191 IGR 193 (535)
T ss_dssp CCE
T ss_pred CCc
Confidence 764
No 34
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.60 E-value=9.5e-15 Score=146.80 Aligned_cols=192 Identities=12% Similarity=0.072 Sum_probs=108.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC--CeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHH-HHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRG--LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEE 145 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G--~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 145 (442)
+.++||||||||++|+++|+.|+++| ++|+||||.....+.+....|.+...... .+.... +.+.+.
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~---------~ds~~~~~~d~~~- 72 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQD---------HDSFEYHFHDTVA- 72 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCST---------TCCHHHHHHHHHH-
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCC---------CCCHHHHHHHHHH-
Confidence 34589999999999999999999999 99999999864433333332222211100 011111 011110
Q ss_pred HHHHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhH-HhhCCccccccccCCceeEEEe
Q 013476 146 RKQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQES-AELFPTLAMKAKDRSLKGAVVY 224 (442)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~ 224 (442)
....+ ........+...+....+++. ..|++ +.......+ ...++. ......++.
T Consensus 73 ------~g~~~---------~d~~~v~~~~~~~~~~i~~L~-~~Gv~-f~~~~~g~~~~~~~gg-------~~~~r~~~~ 128 (602)
T 1kf6_A 73 ------GGDWL---------CEQDVVDYFVHHCPTEMTQLE-LWGCP-WSRRPDGSVNVRRFGG-------MKIERTWFA 128 (602)
T ss_dssp ------HTTTC---------SCHHHHHHHHHHHHHHHHHHH-HTTCC-CCBCTTSSBCCBCCTT-------CSSCCEECS
T ss_pred ------hcCCC---------CCHHHHHHHHHHHHHHHHHHH-HcCCC-cccCCCCcccccccCC-------ccCCeEEEc
Confidence 00000 000001111222234455554 45554 221110000 000000 001111111
Q ss_pred eCcccChHHHHHHHHHHHHHcC-ceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH
Q 013476 225 YDGQMNDSRLNVGLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (442)
Q Consensus 225 ~~~~~~~~~l~~~l~~~~~~~G-v~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~ 298 (442)
.......++..|.+.+++.| ++|+++++|++|+.++ + +|+||.+.+..+|+...+.||.||+|||+++..
T Consensus 129 --~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g-~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 129 --ADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-G-HVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp --TTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-T-EEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred --CCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-C-EEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 11123578889999998888 9999999999999876 5 999998875446665689999999999999964
No 35
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.60 E-value=8.7e-14 Score=137.12 Aligned_cols=119 Identities=17% Similarity=0.079 Sum_probs=77.0
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
.++...+...|.+.+++.|++|+++++|+++.++++ .|+ |++.+ .+| ..+++||+||.|+|.+| .+.+.+|+..
T Consensus 103 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S-~VR~~lg~~~ 176 (499)
T 2qa2_A 103 AVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD--HVV-VEVEG-PDG-PRSLTTRYVVGCDGGRS-TVRKAAGFDF 176 (499)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS--CEE-EEEEC-SSC-EEEEEEEEEEECCCTTC-HHHHHTTCCC
T ss_pred ecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--EEE-EEEEc-CCC-cEEEEeCEEEEccCccc-HHHHHcCCCC
Confidence 355678888999999999999999999999999875 444 55654 334 35799999999999999 5888888765
Q ss_pred CCcccCCCeeEEEeCCCCCCCCceEEeeecCCCcEEEEEecC-CcEEEc
Q 013476 308 QPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAG 355 (442)
Q Consensus 308 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-g~~~~g 355 (442)
+..-.........++....+.. ..+...++ ..++++|.. +.+.+.
T Consensus 177 ~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~-g~~~~~P~~~g~~~~~ 222 (499)
T 2qa2_A 177 PGTSASREMFLADIRGCEITPR--PIGETVPL-GMVMSAPLGDGVDRII 222 (499)
T ss_dssp CEECCCCCEEEEEEESCCCCCE--EEEEEETT-EEEEEEECSSSCEEEE
T ss_pred CCCCCccEEEEEEEEECCCCcc--eEEEECCC-eEEEEEEcCCCEEEEE
Confidence 3222222333333332222221 22221333 457788864 444444
No 36
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.60 E-value=8.1e-14 Score=137.38 Aligned_cols=73 Identities=29% Similarity=0.285 Sum_probs=59.3
Q ss_pred cChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 229 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
++...+...|.+.+++.|++|+++++|+++.++++ .|+ |++.+ .+| ..+++||+||.|+|.+| .+.+.+|+..
T Consensus 103 i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S-~VR~~lg~~~ 175 (500)
T 2qa1_A 103 VPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA--GVT-VEVRG-PEG-KHTLRAAYLVGCDGGRS-SVRKAAGFDF 175 (500)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT--EEE-EEEEE-TTE-EEEEEESEEEECCCTTC-HHHHHTTCCC
T ss_pred cCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC--eEE-EEEEc-CCC-CEEEEeCEEEECCCcch-HHHHHcCCCc
Confidence 45567888999999999999999999999999875 554 66655 333 35799999999999999 5888888765
No 37
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.60 E-value=7.8e-15 Score=148.21 Aligned_cols=66 Identities=23% Similarity=0.173 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHc--CceEecCeEEEEEEEcCC--CCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 231 DSRLNVGLALTAALA--GAAVLNHAEVISLIKDEA--SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~--Gv~i~~~~~v~~l~~~~~--g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
...+...|.+.+++. |++|+.++.|++|+.+++ | +|+||.+.+..+|+...+.||.||+|||+++.
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g-~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPN-RIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTT-BEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccc-eEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 356778888888887 999999999999998875 6 99999987655677778999999999999885
No 38
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.60 E-value=1.1e-14 Score=141.76 Aligned_cols=71 Identities=13% Similarity=0.088 Sum_probs=59.3
Q ss_pred ChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh----------HHH
Q 013476 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC----------DSV 299 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s----------~~l 299 (442)
....+...|.+.+++.|++|+++++|++|..++ + +|++|++. +|+ .++||.||+|||+++ ..+
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~-~v~~V~~~---~G~--~i~Ad~VVlAtGg~s~~~~g~tG~g~~l 204 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-G-QTKAVILQ---TGE--VLETNHVVIAVGGKSVPQTGSTGDGYAW 204 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---TCC--EEECSCEEECCCCSSSGGGSCSSHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-C-cEEEEEEC---CCC--EEECCEEEECCCCCcCCCCCCCcHHHHH
Confidence 346788999999999999999999999999876 5 88888763 443 699999999999999 578
Q ss_pred hhhhCCCC
Q 013476 300 RKLADQNV 307 (442)
Q Consensus 300 ~~~~g~~~ 307 (442)
++.+|+.+
T Consensus 205 a~~~G~~~ 212 (447)
T 2i0z_A 205 AEKAGHTI 212 (447)
T ss_dssp HHHTTCCE
T ss_pred HHHCCCCc
Confidence 88888763
No 39
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.59 E-value=6.3e-14 Score=136.86 Aligned_cols=76 Identities=24% Similarity=0.288 Sum_probs=63.3
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
.++...+...|.+.+.+.|++++++++|+++..++ + +|+||++.+..+|+...+.||.||.|+|.+| .+.+.++..
T Consensus 96 ~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~-~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s-~vr~~l~~~ 171 (453)
T 3atr_A 96 ELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-G-YVKGAVLFNRRTNEELTVYSKVVVEATGYSR-SFRSKLPPE 171 (453)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-T-EEEEEEEEETTTTEEEEEECSEEEECCGGGC-TTGGGSCTT
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-C-EEEEEEEEEcCCCceEEEEcCEEEECcCCch-hhHHhcCCC
Confidence 56778899999999999999999999999999877 4 8988888751155556899999999999998 477777654
No 40
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.58 E-value=1e-14 Score=145.99 Aligned_cols=75 Identities=15% Similarity=0.155 Sum_probs=61.8
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
..+++..+...|.+.+++.|++++++++|+++..++ + .+++|++.+ +|...++.||.||.|+|.+| .+.+.+++.
T Consensus 123 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g-~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S-~lr~~lg~~ 197 (591)
T 3i3l_A 123 VQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-P-DRVVLTVRR--GGESVTVESDFVIDAGGSGG-PISRKLGVR 197 (591)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-T-TCEEEEEEE--TTEEEEEEESEEEECCGGGC-HHHHHHTCE
T ss_pred EEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-C-CEEEEEEec--CCceEEEEcCEEEECCCCcc-hhHHHcCCC
Confidence 356788899999999999999999999999999874 4 667777764 45446899999999999988 577777765
No 41
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.56 E-value=4.7e-14 Score=143.10 Aligned_cols=191 Identities=21% Similarity=0.165 Sum_probs=107.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHH---H-CCCeEEEEeccCCCCCCccCCCCcccchhhh--hHHhhhccCcchHHHHHHH
Q 013476 69 SNPLDILVIGGGATGCGVALDAA---T-RGLRVGLVEREDFSSGTSSRSTKLIHGGVRY--LEKAVFNLDYGQLKLVFHA 142 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La---~-~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 142 (442)
+.++||||||||++||+||+.|+ + +|++|+||||....++ +..+.|....+... ..... .....+...+.
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s-~~~a~G~~~~~~~~~~~~~~g---~~ds~~~~~~~ 95 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERS-GAVAQGLSAINTYIDLTGRSE---RQNTLEDYVRY 95 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTC-STTTTCEEEESCCCCSSSSBS---CCCCHHHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCC-cceecccccccchhhHHHhcC---CCCCHHHHHHH
Confidence 34599999999999999999999 6 8999999999975432 22333332111000 00000 01121221111
Q ss_pred HHHHHHHHHhCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEE
Q 013476 143 LEERKQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAV 222 (442)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 222 (442)
.... ...+ +.......+...+.+..+++. ..|++ +.... .. .+ .......
T Consensus 96 ~~~~------g~~l---------~d~~~v~~~~~~~~~~i~~l~-~~Gv~-f~~~~-~g------~~----~~~~~~~-- 145 (643)
T 1jnr_A 96 VTLD------MMGL---------AREDLVADYARHVDGTVHLFE-KWGLP-IWKTP-DG------KY----VREGQWQ-- 145 (643)
T ss_dssp HHHH------TTTC---------CCHHHHHHHHHHHHHHHHHHH-HTTCC-BCBCT-TS------CB----CBSSSSC--
T ss_pred HHHH------hcCc---------CcHHHHHHHHHHHHHHHHHHH-HcCCc-ceeCC-CC------Cc----cCCCccc--
Confidence 1110 0000 001111112222334556664 45665 21110 00 00 0000000
Q ss_pred EeeCcccChHHHHHHHHHHHHHc-Cc-eEecCeEEEEEEEcCC--CCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH
Q 013476 223 VYYDGQMNDSRLNVGLALTAALA-GA-AVLNHAEVISLIKDEA--SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (442)
Q Consensus 223 ~~~~~~~~~~~l~~~l~~~~~~~-Gv-~i~~~~~v~~l~~~~~--g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~ 298 (442)
..+++..+...|.+.+++. |+ +|+++++|++|+.+++ | +|+||++.+..+|+...+.||.||+|||+++..
T Consensus 146 ----~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g-~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 146 ----IMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPN-AVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp ----EEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTT-BEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred ----cCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccc-eeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 0122345677888888887 99 9999999999998764 5 899998865456666689999999999999853
No 42
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.55 E-value=1.2e-14 Score=139.65 Aligned_cols=69 Identities=10% Similarity=-0.009 Sum_probs=54.8
Q ss_pred cChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh----------HH
Q 013476 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC----------DS 298 (442)
Q Consensus 229 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s----------~~ 298 (442)
.....+.+.|.+.+++.|++|+++++|++|..+++ .+ .|.. .+ . .+.||.||+|||+++ ..
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~--~~-~V~~---~~--g-~i~ad~VIlAtG~~S~p~~gs~g~g~~ 199 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS--GF-RVTT---SA--G-TVDAASLVVASGGKSIPKMGATGLAYR 199 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--EE-EEEE---TT--E-EEEESEEEECCCCSSCGGGTCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EE-EEEE---CC--c-EEEeeEEEECCCCccCCCCCCCcHHHH
Confidence 44578889999999999999999999999998774 32 2333 22 2 799999999999998 46
Q ss_pred HhhhhCCC
Q 013476 299 VRKLADQN 306 (442)
Q Consensus 299 l~~~~g~~ 306 (442)
+++.+|..
T Consensus 200 la~~~G~~ 207 (417)
T 3v76_A 200 IAEQFGLP 207 (417)
T ss_dssp HHHHTTCC
T ss_pred HHHHCCCC
Confidence 77778765
No 43
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.55 E-value=1.6e-14 Score=143.40 Aligned_cols=163 Identities=13% Similarity=0.090 Sum_probs=95.4
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
..+++..+...|.+.+++.|++++++ +|+++..++++ .+++|++. +|+ ++.||.||.|+|.+|..+.+.+|..
T Consensus 168 ~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~-~~~~v~~~---~g~--~~~ad~vV~A~G~~S~~~~~~~g~~ 240 (511)
T 2weu_A 168 YHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERG-WISGVHTK---QHG--EISGDLFVDCTGFRGLLINQTLGGR 240 (511)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTS-CEEEEEES---SSC--EEECSEEEECCGGGCCCCCCCTCCC
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCC-CEEEEEEC---CCC--EEEcCEEEECCCcchHHHHHHhCCC
Confidence 35788899999999999999999999 99999987666 77777663 443 7999999999999995445566654
Q ss_pred CC--CcccCCCe-eEEEeCCCCC--CCCceEEeeecCCCcEEEEEecCCcEEEccCCCCCCCCCCCCCCHHHH-HHHHHH
Q 013476 307 VQ--PMICPSSG-VHIVLPDYYS--PEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEI-QFILDA 380 (442)
Q Consensus 307 ~~--~~~~~~~g-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~g~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 380 (442)
.. ....+... ..+.++.... .... ......+ +..+|++|..++..+|..... + ..+++.. +.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~~~~P~~~~~~~g~~~~~-----~-~~~~~~~~~~l~~~ 312 (511)
T 2weu_A 241 FQSFSDVLPNNRAVALRVPRENDEDMRPY-TTATAMS-AGWMWTIPLFKRDGNGYVYSD-----E-FISPEEAERELRST 312 (511)
T ss_dssp EEECTTTCCCCEEEEEEEECSSGGGCCSS-EEEEEET-TEEEEEEECSSEEEEEEEECT-----T-TSCHHHHHHHHHHH
T ss_pred CccccccCcccceEEEEeccCCCCCCCcc-eeceecC-CCcEEEEECCCceEEEEEECC-----C-CCCHHHHHHHHHHH
Confidence 21 11233332 2222322111 1111 1111122 346888998766655543321 1 1233333 333333
Q ss_pred hhhhcCCCCCCCCeeeeeeecccccc
Q 013476 381 ISDYLNVKVRRTDVLSAWSGIRPLAM 406 (442)
Q Consensus 381 ~~~~~~~~l~~~~~~~~~~G~r~~t~ 406 (442)
+ ... |.+....+...|.|.++...
T Consensus 313 ~-~~~-~~~~~~~~~~~~~~~~~~~~ 336 (511)
T 2weu_A 313 V-APG-RDDLEANHIQMRIGRNERTW 336 (511)
T ss_dssp H-CTT-CTTSCCEEEECCCEEESCSE
T ss_pred h-Ccc-cccccceeEEeecccccccc
Confidence 3 222 33444455666777776554
No 44
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.53 E-value=2.5e-13 Score=130.78 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=52.1
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhh-CCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA-DQN 306 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~-g~~ 306 (442)
.++...+...|.+.+.+ ++|+++++|++++.+++ .|+ |++ .+|+ ++.||.||.|+|.+| .+.+.+ +..
T Consensus 123 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~--~v~-v~~---~~g~--~~~a~~vV~AdG~~S-~vr~~l~~~~ 191 (407)
T 3rp8_A 123 PVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD--GVT-VWF---TDGS--SASGDLLIAADGSHS-ALRPWVLGFT 191 (407)
T ss_dssp EEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT--EEE-EEE---TTSC--EEEESEEEECCCTTC-SSHHHHHSSC
T ss_pred EEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC--cEE-EEE---cCCC--EEeeCEEEECCCcCh-HHHHHhcCCC
Confidence 35667888888888876 89999999999998875 432 333 3444 799999999999999 466655 654
No 45
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.52 E-value=1.9e-13 Score=137.18 Aligned_cols=78 Identities=18% Similarity=0.142 Sum_probs=60.2
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEEC---CCCce-------EEEEcCEEEEccCCChH
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNN---LSGKE-------FDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~---~~g~~-------~~i~a~~VVlAtG~~s~ 297 (442)
.++...+...|.+.+++.|++|+++++|++|..+++| +|+||++.+. .+|+. ..++||.||+|+|.+|.
T Consensus 140 ~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g-~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 140 VVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDG-SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTS-SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred EEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCC-CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 3566788999999999999999999999999998767 8888887520 13421 47999999999999984
Q ss_pred ---HHhhhhCCC
Q 013476 298 ---SVRKLADQN 306 (442)
Q Consensus 298 ---~l~~~~g~~ 306 (442)
.|.+.+|+.
T Consensus 219 vr~~l~~~~gl~ 230 (584)
T 2gmh_A 219 LAKQLYKKFDLR 230 (584)
T ss_dssp HHHHHHHHTTTT
T ss_pred HHHHHHHHhCCC
Confidence 333334654
No 46
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.51 E-value=1.1e-12 Score=127.13 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.+.|.+.++++|++|+++++|++|..++ + ++++|.+ +| ..+.||.||+|++.+.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~-~~~gv~~----~g--~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN-G-KAAGIIA----DD--RIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEE----TT--EEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC-C-EEEEEEE----CC--EEEECCEEEECCCHHH
Confidence 6789999999999999999999999999887 5 8888865 23 4799999999999875
No 47
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.50 E-value=5.6e-13 Score=130.40 Aligned_cols=176 Identities=13% Similarity=0.100 Sum_probs=102.6
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCCCccCCCCcccchhhhhHHhhhccCcchHHH-HHHHHHHHHHHHH
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEERKQVIR 151 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 151 (442)
||||||+|++|+++|++|+++|++|+||||. ..++++..+.|.+...... ...... +.+.+.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~---------~d~~~~~~~d~l~~-g---- 65 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGS---------DDSPELHAQDTIRV-G---- 65 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCST---------TCCHHHHHHHHHHH-H----
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCC---------CCCHHHHHHHHHHh-c----
Confidence 8999999999999999999999999999999 5556666555544322110 011111 1111110 0
Q ss_pred hCCcccccCCCcccCCchhhHHHHHHHHHHHHHHhccCCCCcceecCHhhHHhhCCccccccccCCceeEEEeeCcccCh
Q 013476 152 NAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDGQMND 231 (442)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (442)
. .+ .................+++. ..|++ +... ...++.. ......+. +....
T Consensus 66 ~--~~---------~d~~~v~~~~~~~~~~i~~l~-~~Gv~-~~~~-----~~~~~g~-------~~~r~~~~--~d~~g 118 (472)
T 2e5v_A 66 D--GL---------CDVKTVNYVTSEAKNVIETFE-SWGFE-FEED-----LRLEGGH-------TKRRVLHR--TDETG 118 (472)
T ss_dssp T--TC---------SCHHHHHHHHHHHHHHHHHHH-HTTCC-CCSS-----CBCCTTC-------SSCCEECS--SSCHH
T ss_pred C--Cc---------CCHHHHHHHHHHHHHHHHHHH-HcCCC-CCcc-----cccccCc-------CcCcEEEe--CCCCH
Confidence 0 00 000001111112223445553 45554 2110 0011111 01111111 22345
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
..+...|.+.+++.|++++++++| +|..++ + +|.||++.+ ....+.||.||+|||+++.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~-~v~Gv~v~~----~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD-G-KVTGFVTEK----RGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET-T-EEEEEEETT----TEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-C-EEEEEEEEe----CCCeEEeeeEEECCCCCcc
Confidence 678889999888889999999999 998876 5 899988742 2235779999999999985
No 48
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.49 E-value=2.8e-13 Score=134.67 Aligned_cols=63 Identities=21% Similarity=0.273 Sum_probs=50.6
Q ss_pred HHHHcCceEecCeEEEEEEEcC---CCCeEEEEEEEECCCCceEEEEcC-EEEEccCCC-hHHHhhhhCC
Q 013476 241 TAALAGAAVLNHAEVISLIKDE---ASNRIIGARIRNNLSGKEFDTYAK-VVVNAAGPF-CDSVRKLADQ 305 (442)
Q Consensus 241 ~~~~~Gv~i~~~~~v~~l~~~~---~g~~v~gV~~~~~~~g~~~~i~a~-~VVlAtG~~-s~~l~~~~g~ 305 (442)
.+.+.|++|++++.|++|..+. ++ +++||++.+ .+|+..+++|+ -||||+|++ |++|+.+.|+
T Consensus 236 ~~~r~NL~V~t~a~V~rIl~d~~~~~~-ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGI 303 (583)
T 3qvp_A 236 NYQRPNLQVLTGQYVGKVLLSQNGTTP-RAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAVSPTILEYSGI 303 (583)
T ss_dssp TTTCTTEEEECSCEEEEEEEECSSSSC-EEEEEEEES-STTCEEEEEEEEEEEECSCTTTHHHHHHHTTB
T ss_pred hhcCCCcEEEcCCEEEEEEeccCCCCC-EEEEEEEEe-cCCcEEEEEECCEEEEeCCccCCHHHHHHcCC
Confidence 3345699999999999999873 35 999999974 36677789995 799999996 6788776665
No 49
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.48 E-value=1.7e-13 Score=131.18 Aligned_cols=69 Identities=17% Similarity=0.129 Sum_probs=54.1
Q ss_pred ChHHHHHHHHHHHHHcCceEecCeEEEEEEEc----CCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh---------
Q 013476 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKD----EASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC--------- 296 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~----~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s--------- 296 (442)
++..+...|.+.+++.|++++++++|+++..+ ++ ++ .|.. .+ . .++||.||+|||+++
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~--~~-~v~~---~~--g-~i~ad~VVlAtG~~s~p~~g~~G~ 177 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKV--RF-VLQV---NS--T-QWQCKNLIVATGGLSMPGLGATPF 177 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSC--CE-EEEE---TT--E-EEEESEEEECCCCSSCGGGTCCSH
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCC--eE-EEEE---CC--C-EEECCEEEECCCCccCCCCCCChH
Confidence 56788899999999999999999999999976 43 32 2332 22 2 799999999999998
Q ss_pred -HHHhhhhCCCC
Q 013476 297 -DSVRKLADQNV 307 (442)
Q Consensus 297 -~~l~~~~g~~~ 307 (442)
..+++.+|...
T Consensus 178 g~~la~~~G~~i 189 (401)
T 2gqf_A 178 GYQIAEQFGIPV 189 (401)
T ss_dssp HHHHHHHTTCCE
T ss_pred HHHHHHHCCCCc
Confidence 36777777663
No 50
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.46 E-value=7e-13 Score=131.33 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.++|.+.++++|++|+++++|++|+.++ + +++||++. +|+ ++.||.||.+++.+.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~-~~~gV~~~---~g~--~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-N-KIEAVHLE---DGR--RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---TSC--EEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-C-eEEEEEec---CCc--EEEcCEEEECCCHHH
Confidence 5789999999999999999999999999988 5 99999884 444 799999999998754
No 51
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.45 E-value=2.9e-12 Score=116.90 Aligned_cols=83 Identities=13% Similarity=0.005 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHH-cCceEecCeEEEEEEEcCCCCeEEEEEEEEC---------CCCceEEEEcCEEEEccCCCh----
Q 013476 231 DSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNN---------LSGKEFDTYAKVVVNAAGPFC---- 296 (442)
Q Consensus 231 ~~~l~~~l~~~~~~-~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~---------~~g~~~~i~a~~VVlAtG~~s---- 296 (442)
...+...|.+.+.+ .|++++++++|+++..++ + ++.+|.+... .+++...+.||.||+|+|..+
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~-~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~ 195 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-N-RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGA 195 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-T-EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTT
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-C-eEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHH
Confidence 45677788887766 699999999999999876 4 8989988520 113346899999999999654
Q ss_pred --HHHhhhhCCCCCCcccCCCee
Q 013476 297 --DSVRKLADQNVQPMICPSSGV 317 (442)
Q Consensus 297 --~~l~~~~g~~~~~~~~~~~g~ 317 (442)
..++..++.. .++.|.+|.
T Consensus 196 ~~~~~~~~~g~~--~~v~~~~g~ 216 (284)
T 1rp0_A 196 TGVKRLKSIGMI--DHVPGMKAL 216 (284)
T ss_dssp HHHHHHHHTTSS--SCCCCCEEE
T ss_pred HHHHHhhhccCC--CCcCCcCCc
Confidence 3444333433 356666663
No 52
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.44 E-value=2.5e-12 Score=128.25 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=59.0
Q ss_pred CcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 226 DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 226 ~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
...+++..+...|.+.+++.|++++++ +|+++..++++ .+++|++ .+|. .+.||.||+|+|.+|..+.+.+|.
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g-~~~~v~~---~~g~--~i~ad~vV~A~G~~s~~~~~~lg~ 231 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRG-YISNLLT---KEGR--TLEADLFIDCSGMRGLLINQALKE 231 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTS-CEEEEEE---TTSC--EECCSEEEECCGGGCCCCCCCTCC
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCC-cEEEEEE---CCCc--EEEeCEEEECCCCchhhHHHHhCC
Confidence 346788999999999999999999999 89999987666 6666665 3443 789999999999999644555665
Q ss_pred C
Q 013476 306 N 306 (442)
Q Consensus 306 ~ 306 (442)
.
T Consensus 232 ~ 232 (538)
T 2aqj_A 232 P 232 (538)
T ss_dssp C
T ss_pred C
Confidence 4
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.44 E-value=2.3e-12 Score=127.07 Aligned_cols=73 Identities=16% Similarity=0.179 Sum_probs=58.6
Q ss_pred cccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH---Hhhhh
Q 013476 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS---VRKLA 303 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~---l~~~~ 303 (442)
+......+...|.+.+++.|++|+++++|++|..++ + ++++|++. +|+ .+.||.||+|+|.++.+ ++...
T Consensus 215 G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~-~v~gV~l~---~G~--~i~Ad~VVlA~G~~s~~~~~~l~~~ 287 (549)
T 3nlc_A 215 GTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-G-QITGVTLS---NGE--EIKSRHVVLAVGHSARDTFEMLHER 287 (549)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS-S-BEEEEEET---TSC--EEECSCEEECCCTTCHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-C-EEEEEEEC---CCC--EEECCEEEECCCCChhhHHHHHHHc
Confidence 344557788899999999999999999999999877 4 78888773 443 79999999999999963 45555
Q ss_pred CCC
Q 013476 304 DQN 306 (442)
Q Consensus 304 g~~ 306 (442)
|+.
T Consensus 288 Gi~ 290 (549)
T 3nlc_A 288 GVY 290 (549)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
No 54
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.42 E-value=2e-12 Score=131.38 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=60.0
Q ss_pred ccChHHHHHHHHHHHHHcCc--eEecCeEEEEEEEcCC--CCeEEEEEEEEC---CCCceEEEEcCEEEEccCCChHHHh
Q 013476 228 QMNDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEA--SNRIIGARIRNN---LSGKEFDTYAKVVVNAAGPFCDSVR 300 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~l~~~~~--g~~v~gV~~~~~---~~g~~~~i~a~~VVlAtG~~s~~l~ 300 (442)
.++...+...|.+.+++.|+ +|+++++|+++.++++ + ..+.|++++. .+|...+++||+||.|+|.+| .+.
T Consensus 137 ~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~-~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S-~vR 214 (639)
T 2dkh_A 137 ILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAAD-YPVTVTLERCDAAHAGQIETVQARYVVGCDGARS-NVR 214 (639)
T ss_dssp ECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSS-CCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC-HHH
T ss_pred eeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCc-CCEEEEEEeccccCCCCeEEEEeCEEEECCCcch-HHH
Confidence 35667888999999999987 9999999999998763 2 2233555530 145556899999999999999 588
Q ss_pred hhhCCCC
Q 013476 301 KLADQNV 307 (442)
Q Consensus 301 ~~~g~~~ 307 (442)
+.+|+..
T Consensus 215 ~~lg~~~ 221 (639)
T 2dkh_A 215 RAIGRQL 221 (639)
T ss_dssp HHTTCCC
T ss_pred HHhCCCC
Confidence 8888764
No 55
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.39 E-value=6.5e-12 Score=125.44 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=58.5
Q ss_pred ccChHHHHHHHHHHHHHc-CceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 228 QMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
.+++..+...|.+.+++. |++++++ +|++|..++++ .+++|++ .+| .++.||.||+|+|.+|..+.+.+|..
T Consensus 190 ~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g-~~~~v~~---~~G--~~i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 190 HFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANG-NIESVRT---ATG--RVFDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp EECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTS-CEEEEEE---TTS--CEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred EEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCC-CEEEEEE---CCC--CEEECCEEEECCCCchhhHHHHhCCC
Confidence 478889999999999998 9999999 99999987666 7777766 344 37999999999999995446666654
No 56
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.38 E-value=2.7e-12 Score=123.27 Aligned_cols=72 Identities=21% Similarity=0.132 Sum_probs=58.2
Q ss_pred ccChHHHHHHHHHHHHHc-CceEecCeEEEEEEEcCCCCeEE-EEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 228 QMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRII-GARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~l~~~~~g~~v~-gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
.++...+...|.+.+++. |++++++++|++++.+++ .++ .|++ .+|+ ++.||.||+|+|.+|. +.+.+|+
T Consensus 103 ~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~--~v~g~v~~---~~g~--~~~ad~vV~AdG~~s~-vr~~lg~ 174 (399)
T 2x3n_A 103 LMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER--HAIDQVRL---NDGR--VLRPRVVVGADGIASY-VRRRLLD 174 (399)
T ss_dssp ECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT--SCEEEEEE---TTSC--EEEEEEEEECCCTTCH-HHHHTSC
T ss_pred cccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC--ceEEEEEE---CCCC--EEECCEEEECCCCChH-HHHHhCC
Confidence 467788999999999988 999999999999998875 443 3444 3444 7899999999999995 8888876
Q ss_pred CC
Q 013476 306 NV 307 (442)
Q Consensus 306 ~~ 307 (442)
..
T Consensus 175 ~~ 176 (399)
T 2x3n_A 175 ID 176 (399)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 57
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.37 E-value=3e-12 Score=126.77 Aligned_cols=61 Identities=21% Similarity=0.361 Sum_probs=49.8
Q ss_pred ccChHHHHHHHHHHHHH-cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 228 QMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~-~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
.++...+...|.+.+++ .|++| ++++|++|..++ + +|+||++. +| ..+.||.||+|||.++
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g-~V~GV~t~---dG--~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN-N-QVVGVRTN---LG--VEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-S-BEEEEEET---TS--CEEECSEEEECCTTCB
T ss_pred hCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-C-EEEEEEEC---CC--cEEEeCEEEEccCCCc
Confidence 45667788889888888 59999 578999998876 4 89888873 44 3799999999999875
No 58
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.37 E-value=4.4e-13 Score=133.41 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=48.4
Q ss_pred HHcCceEecCeEEEEEEEcC-CCCeEEEEEEEECCCCceEEEEc-CEEEEccCCC-hHHHhhhhCC
Q 013476 243 ALAGAAVLNHAEVISLIKDE-ASNRIIGARIRNNLSGKEFDTYA-KVVVNAAGPF-CDSVRKLADQ 305 (442)
Q Consensus 243 ~~~Gv~i~~~~~v~~l~~~~-~g~~v~gV~~~~~~~g~~~~i~a-~~VVlAtG~~-s~~l~~~~g~ 305 (442)
.+.|++|++++.|++|..+. ++ +++||++.. .+|+..+++| |.||||+|++ ++.|+...|+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~-~a~GV~~~~-~~g~~~~v~A~keVILsaGa~~sp~lL~~SGI 280 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADR-TCKGVTVVT-AAGNELNFFADREVILSQGVFETPKLLMLSGI 280 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTT-EEEEEEEEE-TTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred cCCCeEEEcCcEEEEEEEeCCCC-EEEEEEEEe-CCCcEEEEEeeeEEEEcccccCChHHHHHcCC
Confidence 34689999999999999983 35 999999986 4467778999 6799999996 5566655543
No 59
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.36 E-value=2.5e-12 Score=127.86 Aligned_cols=61 Identities=23% Similarity=0.289 Sum_probs=50.0
Q ss_pred ccChHHHHHHHHHHHHH-cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 228 QMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~-~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
.+++..+...|.+.+++ .|+++ ++++|++|..++ + +|++|++. +| ..+.||.||+|||.++
T Consensus 120 ~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g-~V~GV~t~---dG--~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 120 QADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN-D-RVVGAVTQ---MG--LKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS-S-BEEEEEET---TS--EEEEEEEEEECCSTTT
T ss_pred hCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-C-EEEEEEEC---CC--CEEECCEEEEcCCCCc
Confidence 45667788889888888 69999 578999998876 4 88888773 44 4799999999999975
No 60
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.35 E-value=1.1e-11 Score=126.24 Aligned_cols=78 Identities=14% Similarity=0.091 Sum_probs=58.6
Q ss_pred ccChHHHHHHHHHHHHHcC---ceEecCeEEEEEEEcC------CCCeEEEEEEEEC-----------------------
Q 013476 228 QMNDSRLNVGLALTAALAG---AAVLNHAEVISLIKDE------ASNRIIGARIRNN----------------------- 275 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~G---v~i~~~~~v~~l~~~~------~g~~v~gV~~~~~----------------------- 275 (442)
.++...+...|.+.+++.| ++++++++++++..++ ++..| .|++.+.
T Consensus 115 ~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (665)
T 1pn0_A 115 VLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNL 193 (665)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHH
T ss_pred EeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCE-EEEEEecccccccccccccccccccccccc
Confidence 3566778888999998887 8999999999999875 11133 3445431
Q ss_pred ----------------CCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 276 ----------------LSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 276 ----------------~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
.+|...+++||+||.|.|.+| .+++.+|+..
T Consensus 194 ~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S-~VR~~lg~~~ 240 (665)
T 1pn0_A 194 QTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS-WVRRTLGFEM 240 (665)
T ss_dssp HHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTC-HHHHHHTCCC
T ss_pred cccccccccccccccCCCCceEEEEeCEEEeccCCCC-HHHHhcCCCC
Confidence 135456899999999999999 6888888764
No 61
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.35 E-value=3.4e-12 Score=122.36 Aligned_cols=72 Identities=13% Similarity=0.130 Sum_probs=54.3
Q ss_pred ChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
+...+...|.+.+.+.|++++++++|+++..++++ .+ .|+++. +|+..+++||.||.|+|.+|. +.+.++..
T Consensus 101 ~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~-~~-~v~~~~--~g~~~~~~a~~vV~AdG~~S~-vr~~l~~~ 172 (394)
T 1k0i_A 101 GQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGE-RP-YVTFER--DGERLRLDCDYIAGCDGFHGI-SRQSIPAE 172 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSS-SC-EEEEEE--TTEEEEEECSEEEECCCTTCS-TGGGSCGG
T ss_pred chHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCC-ce-EEEEec--CCcEEEEEeCEEEECCCCCcH-HHHhcCcc
Confidence 44667788888888889999999999999886432 22 355532 454447999999999999994 77776543
No 62
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.33 E-value=1.4e-11 Score=123.04 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=56.3
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
.++...+...|.+.+++. |+++++|++++++++ .|+ |++.+..+|+..+++||+||.|+|.+|. +.+.+|+..
T Consensus 134 ~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~--~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~lg~~~ 206 (549)
T 2r0c_A 134 ICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDD--HVR-ATITDLRTGATRAVHARYLVACDGASSP-TRKALGIDA 206 (549)
T ss_dssp ECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSS--CEE-EEEEETTTCCEEEEEEEEEEECCCTTCH-HHHHHTCCC
T ss_pred ccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCC--EEE-EEEEECCCCCEEEEEeCEEEECCCCCcH-HHHHcCCCC
Confidence 345567778888888776 899999999999875 454 5555423455568999999999999994 888888764
No 63
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.32 E-value=6.1e-11 Score=109.11 Aligned_cols=67 Identities=15% Similarity=0.136 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHH-cCceEecCeEEEEEEEcCC-----------------CCeEEEEEEEEC---CCC------ceEEE
Q 013476 231 DSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEA-----------------SNRIIGARIRNN---LSG------KEFDT 283 (442)
Q Consensus 231 ~~~l~~~l~~~~~~-~Gv~i~~~~~v~~l~~~~~-----------------g~~v~gV~~~~~---~~g------~~~~i 283 (442)
...+...|.+.+++ .|+++++++.+++|..+++ +.+|.||++... ..+ ...+|
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 35677888888888 4999999999999987652 128899988521 112 34689
Q ss_pred EcCEEEEccCCChH
Q 013476 284 YAKVVVNAAGPFCD 297 (442)
Q Consensus 284 ~a~~VVlAtG~~s~ 297 (442)
+||.||+|||..+.
T Consensus 239 ~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 239 NAPVIISTTGHDGP 252 (344)
T ss_dssp ECSEEEECCCSSSS
T ss_pred EcCEEEECCCCCch
Confidence 99999999999874
No 64
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.32 E-value=4.3e-11 Score=113.99 Aligned_cols=66 Identities=23% Similarity=0.216 Sum_probs=53.2
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
.++...+...|.+.+++.|++++++++|+++.. ++ . |++ .+|+ ++.||.||.|+|.+| .+.+.++.
T Consensus 103 ~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~---v~~---~~g~--~~~ad~vV~AdG~~s-~vr~~l~~ 168 (379)
T 3alj_A 103 IMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-R---LTL---QTGE--VLEADLIVGADGVGS-KVRDSIGF 168 (379)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-E---EEE---TTSC--EEECSEEEECCCTTC-HHHHHHCC
T ss_pred EECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-E---EEE---CCCC--EEEcCEEEECCCccH-HHHHHhcC
Confidence 456678899999999999999999999999987 33 2 444 3443 799999999999999 57777765
No 65
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.31 E-value=9.7e-12 Score=123.55 Aligned_cols=62 Identities=19% Similarity=0.336 Sum_probs=49.6
Q ss_pred ccChHHHHHHHHHHHHHc-CceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 228 QMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
.++...+...|.+.+++. |++++ +.+|+.|..++ + +|.||.+. +|. .+.||.||+|||.++.
T Consensus 113 ~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~-g-~V~GV~t~---~G~--~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 113 QADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS-G-KFSSVTVR---SGR--AIQAKAAILACGTFLN 175 (641)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-T-EEEEEEET---TSC--EEEEEEEEECCTTCBT
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC-C-EEEEEEEC---CCc--EEEeCEEEECcCCCCC
Confidence 456678888888888875 99995 56899998876 4 89888763 443 7999999999999864
No 66
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.30 E-value=5.6e-12 Score=125.17 Aligned_cols=62 Identities=21% Similarity=0.197 Sum_probs=49.0
Q ss_pred HHHcCceEecCeEEEEEEEc----CCCCeEEEEEEEECCCC-ceEEEEc-CEEEEccCCC-hHHHhhhhCC
Q 013476 242 AALAGAAVLNHAEVISLIKD----EASNRIIGARIRNNLSG-KEFDTYA-KVVVNAAGPF-CDSVRKLADQ 305 (442)
Q Consensus 242 ~~~~Gv~i~~~~~v~~l~~~----~~g~~v~gV~~~~~~~g-~~~~i~a-~~VVlAtG~~-s~~l~~~~g~ 305 (442)
..+.+++|+.++.|++|..+ +++ +++||++.. .+| +..+++| |-||||+|++ |++|+.+.|+
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~~-rA~GVe~~~-~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGI 286 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGLP-AFRCVEYAE-QEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGI 286 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTEE-ECCEEEEES-STTSCCEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCCC-EEEEEEEEE-CCCceEEEEEeeeEEEEecCCcCChHHHHhcCC
Confidence 34569999999999999987 325 899999975 334 5678899 7899999985 6788776654
No 67
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.29 E-value=2.5e-11 Score=120.65 Aligned_cols=73 Identities=10% Similarity=0.115 Sum_probs=57.3
Q ss_pred cccChHHHHHHHHHHHHH-cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 227 GQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 227 ~~~~~~~l~~~l~~~~~~-~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
..+++..+...|.+.+++ .|++++++ +|+++..++++ .+++|+. .+|. .+.||.||.|+|.+|.-+.+.+|+
T Consensus 170 ~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g-~~~~v~~---~~g~--~i~ad~vV~AdG~~S~~~~~~lg~ 242 (526)
T 2pyx_A 170 YHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHG-DIEKLIT---KQNG--EISGQLFIDCTGAKSLLLGEHLQV 242 (526)
T ss_dssp EEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTS-CEEEEEE---SSSC--EEECSEEEECSGGGCCCCCCCTCC
T ss_pred EEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCC-cEEEEEE---CCCC--EEEcCEEEECCCcchHHHHHHhCC
Confidence 356788899999999998 89999999 59999987666 6666655 2443 599999999999998543666665
Q ss_pred C
Q 013476 306 N 306 (442)
Q Consensus 306 ~ 306 (442)
.
T Consensus 243 ~ 243 (526)
T 2pyx_A 243 P 243 (526)
T ss_dssp C
T ss_pred C
Confidence 4
No 68
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.29 E-value=1.7e-10 Score=111.09 Aligned_cols=74 Identities=20% Similarity=0.142 Sum_probs=54.0
Q ss_pred ccChHHHHHHHHHHHHHc-C-ceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 228 QMNDSRLNVGLALTAALA-G-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~-G-v~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
.++...+...|.+.+++. | ++++++++|+++.. +++ |+ |++.+..+|+..++.||.||.|+|.+| .+.+.++.
T Consensus 103 ~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S-~vR~~l~~ 177 (410)
T 3c96_A 103 SIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RV-LIGARDGHGKPQALGADVLVGADGIHS-AVRAHLHP 177 (410)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EE-EEEEEETTSCEEEEEESEEEECCCTTC-HHHHHHCT
T ss_pred eeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cE-EEEecCCCCCceEEecCEEEECCCccc-hhHHHhcC
Confidence 355677888898888774 6 58999999999988 544 33 444431235446799999999999999 57776654
Q ss_pred C
Q 013476 306 N 306 (442)
Q Consensus 306 ~ 306 (442)
.
T Consensus 178 ~ 178 (410)
T 3c96_A 178 D 178 (410)
T ss_dssp T
T ss_pred C
Confidence 3
No 69
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.28 E-value=5.9e-11 Score=104.75 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=48.2
Q ss_pred ChHHHHHHHHHHHHHc-CceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH
Q 013476 230 NDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~ 298 (442)
++..+...|.+.+++. |++++ +++|+++..++ + ++++|.+ .+|. .+.||.||+|+|.++..
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~-~v~~v~~---~~g~--~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-N-RVVGVRT---WEGP--PARGEKVVLAVGSFLGA 127 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-T-EEEEEEE---TTSC--CEECSEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-C-EEEEEEE---CCCC--EEECCEEEECCCCChhh
Confidence 3456778888888887 99998 67999998876 4 7877766 3443 78999999999998753
No 70
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.26 E-value=4.1e-11 Score=115.85 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
...+.+.|.+.++++|++|+++++|++|..+++ ++ | . .+| ..+.||.||+|+|.+.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~--~v--V--~--~~g--~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEK--KV--Y--T--RDN--EEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTT--EE--E--E--TTC--CEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECC--EE--E--E--eCC--cEEEeCEEEECCCHHH
Confidence 478899999999999999999999999998774 55 3 2 233 3799999999999865
No 71
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.25 E-value=1.9e-10 Score=105.32 Aligned_cols=66 Identities=9% Similarity=0.002 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHc-CceEecCeEEEEEEEcC--C--CCeEEEEEEEEC---CCC------ceEEEEc-----------
Q 013476 231 DSRLNVGLALTAALA-GAAVLNHAEVISLIKDE--A--SNRIIGARIRNN---LSG------KEFDTYA----------- 285 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~-Gv~i~~~~~v~~l~~~~--~--g~~v~gV~~~~~---~~g------~~~~i~a----------- 285 (442)
...+...|.+.+.+. |++++.+++|++|..++ + ..+|+||++... .++ ....+.|
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 356788888888885 99999999999999874 2 127999987521 111 3357999
Q ss_pred ----CEEEEccCCCh
Q 013476 286 ----KVVVNAAGPFC 296 (442)
Q Consensus 286 ----~~VVlAtG~~s 296 (442)
|.||+|||..+
T Consensus 225 ~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 225 SQKHGVILSTTGHDG 239 (326)
T ss_dssp STTCCEEEECCCCC-
T ss_pred cccCCEEEECcCCCc
Confidence 99999999765
No 72
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.24 E-value=1.1e-10 Score=111.99 Aligned_cols=62 Identities=21% Similarity=0.179 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g 304 (442)
..+...|.+.+ .|++++++++|+++..++++ ++ |++ .+|+ ++.||.||.|+|.+| .+.+.++
T Consensus 99 ~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~-v~~---~~g~--~~~ad~vV~AdG~~S-~vr~~~~ 160 (397)
T 2vou_A 99 DSIYGGLYELF--GPERYHTSKCLVGLSQDSET--VQ-MRF---SDGT--KAEANWVIGADGGAS-VVRKRLL 160 (397)
T ss_dssp HHHHHHHHHHH--CSTTEETTCCEEEEEECSSC--EE-EEE---TTSC--EEEESEEEECCCTTC-HHHHHHH
T ss_pred HHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE--EE-EEE---CCCC--EEECCEEEECCCcch-hHHHHhc
Confidence 45556665554 58999999999999988753 32 333 3443 789999999999999 5777776
No 73
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.24 E-value=1.9e-11 Score=121.65 Aligned_cols=58 Identities=12% Similarity=0.160 Sum_probs=47.8
Q ss_pred HcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCC-hHHHhhhhCC
Q 013476 244 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF-CDSVRKLADQ 305 (442)
Q Consensus 244 ~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~-s~~l~~~~g~ 305 (442)
..+.+++.++.|.++..++ + +++||.+.. .+....+.||.||||+|.. |+.|+...|+
T Consensus 223 r~nl~v~~~~~v~~i~~~~-~-~a~gv~~~~--~~~~~~~~a~~VILsAGai~SP~LLl~SGi 281 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG-N-QVRSLEVVG--RQGSAEVFADQIVLCAGALESPALLMRSGI 281 (526)
T ss_dssp CTTEEEECSCEEEEEEEET-T-EEEEEEEEE--TTEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred CCCeEEEeCCEEEEEEecC-C-eEEEEEEEe--cCceEEEeecceEEcccccCCcchhhhccC
Confidence 3589999999999999988 4 999999986 3445678999999999984 6788876654
No 74
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.23 E-value=1.5e-10 Score=111.73 Aligned_cols=64 Identities=16% Similarity=0.321 Sum_probs=51.0
Q ss_pred EeeCcccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCC
Q 013476 223 VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (442)
Q Consensus 223 ~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~ 295 (442)
++..|. ..+.++|.+.+++.|++|+++++|++|..+++| +++||++. +|+ .+.||.||.+++.+
T Consensus 250 yp~gG~---~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g-~v~gV~~~---~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 250 YPLYGL---GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDN-KVCGIKSS---DGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp EETTCT---THHHHHHHHHHHHC--CEESSCCEEEEEECTTS-CEEEEEET---TSC--EEEEEEEEECGGGC
T ss_pred EECCCH---HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCC-eEEEEEEC---CCc--EEECCEEEECCCcc
Confidence 444443 689999999999999999999999999984446 89999873 343 69999999999987
No 75
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.22 E-value=3.7e-11 Score=118.29 Aligned_cols=65 Identities=17% Similarity=0.048 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcC-CCCeEEEEEEEECC-CCceEEEEcCEEEEccCCChH
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDE-ASNRIIGARIRNNL-SGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~-~g~~v~gV~~~~~~-~g~~~~i~a~~VVlAtG~~s~ 297 (442)
...+...|.+.+++.|++++++++|+++..++ ++ ..+.|++++ . +|+...+.||.||+|+|.++.
T Consensus 165 ~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~-~~~~v~~~~-~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 165 IRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKG-SGWRAQLQP-NPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTT-CCBEEEEES-CCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCC-CEEEEEEEE-CCCCCEEEEEcCEEEECCCCCcc
Confidence 46678888888888999999999999998752 23 344566642 2 332246899999999999883
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.21 E-value=3.2e-11 Score=113.63 Aligned_cols=59 Identities=17% Similarity=0.096 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
...+...+.+.+++.|++++++++|+++..+++ .+.+|.. .+ . ++.+|.||+|||.++.
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~v~~---~~--g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 75 RAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE--RLRVVAR---DG--R-QWLARAVISATGTWGE 133 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT--EEEEEET---TS--C-EEEEEEEEECCCSGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC--cEEEEEe---CC--C-EEEeCEEEECCCCCCC
Confidence 456778888888889999999999999998874 4322332 22 2 7999999999998774
No 77
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.19 E-value=1.3e-10 Score=115.55 Aligned_cols=69 Identities=19% Similarity=0.188 Sum_probs=53.4
Q ss_pred HHHHHHHH-HcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcC-EEEEccCCC-hHHHhhhhCC
Q 013476 236 VGLALTAA-LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAK-VVVNAAGPF-CDSVRKLADQ 305 (442)
Q Consensus 236 ~~l~~~~~-~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~-~VVlAtG~~-s~~l~~~~g~ 305 (442)
..++..+. +.|++|+.++.|++|..++++ +++||++.+..+|+...++|+ .||+|+|++ ++.|+...|+
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~-~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGi 283 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADR-RCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGI 283 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTS-BEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCC-eEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCC
Confidence 44444444 569999999999999997645 999999875222666789997 999999994 7888876654
No 78
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.18 E-value=1.4e-10 Score=106.92 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=33.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 68 ~~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
.|+.|||+|||||++|++||++|++.|++|+|||++..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~ 40 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN 40 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46789999999999999999999999999999999753
No 79
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.18 E-value=1.5e-09 Score=106.29 Aligned_cols=38 Identities=29% Similarity=0.441 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC------CeEEEEeccC-CCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRG------LRVGLVERED-FSS 107 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G------~~V~liEk~~-~~~ 107 (442)
+.+||+|||||++||+||++|+++| ++|+|+|+.+ +++
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 3589999999999999999999999 9999999985 544
No 80
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.17 E-value=2.9e-11 Score=119.99 Aligned_cols=66 Identities=21% Similarity=0.171 Sum_probs=50.7
Q ss_pred HHHHHHHcCceEecCeEEEEEEEcCC--CCeEEEEEEEECCCCceEEE---EcCEEEEccCCC-hHHHhhhhCC
Q 013476 238 LALTAALAGAAVLNHAEVISLIKDEA--SNRIIGARIRNNLSGKEFDT---YAKVVVNAAGPF-CDSVRKLADQ 305 (442)
Q Consensus 238 l~~~~~~~Gv~i~~~~~v~~l~~~~~--g~~v~gV~~~~~~~g~~~~i---~a~~VVlAtG~~-s~~l~~~~g~ 305 (442)
++..+++.|++|++++.|++|..+++ + +++||++.+ .+|+..++ .+|.||+|+|++ ++.|+...|+
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~-~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGL-TATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSC-BEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCC-EEEEEEEEe-CCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 34445667999999999999998763 4 899999975 35554455 469999999997 6778776654
No 81
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.16 E-value=1.6e-10 Score=97.68 Aligned_cols=65 Identities=15% Similarity=-0.003 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
+..+...+.+.+++.|++++++ +|+++..++++ + .|.+ .+| .+.||.||+|+|..+ ++++.+|++
T Consensus 55 ~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~-~v~~---~~g---~i~ad~vI~A~G~~~-~~~~~~g~~ 119 (180)
T 2ywl_A 55 GEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--F-EVET---EEG---VEKAERLLLCTHKDP-TLPSLLGLT 119 (180)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--E-EEEC---SSC---EEEEEEEEECCTTCC-HHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--E-EEEE---CCC---EEEECEEEECCCCCC-CccccCCCC
Confidence 3567778888888999999999 99999987644 2 2332 233 789999999999987 577777754
No 82
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.16 E-value=1.5e-10 Score=112.84 Aligned_cols=60 Identities=15% Similarity=0.180 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEc--CCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHH
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKD--EASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~--~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l 299 (442)
..+.++|.+.+++.|++|+++++|++|..+ + + ++++|.. +| ..+.||.||+|+|.++..+
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~~~~V~~----~g--~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT-G-KFEGVKT----KL--GTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTT-T-EEEEEEE----TT--EEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC-C-eEEEEEE----CC--eEEECCEEEECCCccchhh
Confidence 578999999999999999999999999987 5 5 8888765 23 4789999999999998654
No 83
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.14 E-value=3.7e-10 Score=111.35 Aligned_cols=66 Identities=11% Similarity=0.126 Sum_probs=51.8
Q ss_pred HHHHHHHHcC-ceEecCeEEEEEEEcCC-CCeEEEEEEEECCCC---ceEEEEcCEEEEccCCC-hHHHhhhhC
Q 013476 237 GLALTAALAG-AAVLNHAEVISLIKDEA-SNRIIGARIRNNLSG---KEFDTYAKVVVNAAGPF-CDSVRKLAD 304 (442)
Q Consensus 237 ~l~~~~~~~G-v~i~~~~~v~~l~~~~~-g~~v~gV~~~~~~~g---~~~~i~a~~VVlAtG~~-s~~l~~~~g 304 (442)
.+++.++++| ++|++++.|++|+.+++ + +++||++.+ .+| +..+++|+.||+|+|++ ++.|+...|
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~-~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGG-YALTVEQKD-TDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSS-EEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCC-EEEEEEEeC-CCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 4455566675 99999999999999853 4 899999874 345 34679999999999997 677777766
No 84
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.12 E-value=5.2e-10 Score=107.56 Aligned_cols=67 Identities=18% Similarity=0.113 Sum_probs=46.8
Q ss_pred ChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCCC
Q 013476 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~~ 307 (442)
+...+.+.|.+. .+.+|+++++++++++.+++ .|+ |+. .+|+ +++||.||.|.|.+| .+.+.++...
T Consensus 110 ~R~~L~~~L~~~---~~~~v~~~~~v~~~~~~~~~-~v~-v~~---~dG~--~~~adlvVgADG~~S-~vR~~l~~~~ 176 (412)
T 4hb9_A 110 SRTELKEILNKG---LANTIQWNKTFVRYEHIENG-GIK-IFF---ADGS--HENVDVLVGADGSNS-KVRKQYLPFI 176 (412)
T ss_dssp EHHHHHHHHHTT---CTTTEECSCCEEEEEECTTS-CEE-EEE---TTSC--EEEESEEEECCCTTC-HHHHHHSTTC
T ss_pred eHHHHHHHHHhh---ccceEEEEEEEEeeeEcCCC-eEE-EEE---CCCC--EEEeeEEEECCCCCc-chHHHhCCCc
Confidence 334454544432 35678999999999987765 543 333 4554 789999999999999 6777776543
No 85
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.12 E-value=2.9e-10 Score=107.76 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=44.9
Q ss_pred cChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 229 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
+.+..+...+.+.+++.|++++++++|+++..++++|. |.. .++ .+.+|.||+|||.++
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~---v~~---~~g---~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYT---IAT---TTE---TYHADYIFVATGDYN 143 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEE---EEE---SSC---CEEEEEEEECCCSTT
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEE---EEe---CCC---EEEeCEEEECCCCCC
Confidence 34456777777888889999999999999998765432 222 222 588999999999976
No 86
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.11 E-value=1.7e-10 Score=115.63 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=49.9
Q ss_pred HHHHcCceEecCeEEEEEEEcCC---CCeEEEEEEEECCCCceEEEEc-CEEEEccCCC-hHHHhhhhCC
Q 013476 241 TAALAGAAVLNHAEVISLIKDEA---SNRIIGARIRNNLSGKEFDTYA-KVVVNAAGPF-CDSVRKLADQ 305 (442)
Q Consensus 241 ~~~~~Gv~i~~~~~v~~l~~~~~---g~~v~gV~~~~~~~g~~~~i~a-~~VVlAtG~~-s~~l~~~~g~ 305 (442)
.+++.|++|+.++.|++|+.+++ + +++||++.+ .+|+..+++| |.||||+|++ ++.|+...|+
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~-~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGP-QAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEE-EEEEEEEEE-ETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCC-EEEEEEEEe-CCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 34456999999999999988642 4 899999975 4666678999 8999999995 5677766654
No 87
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.10 E-value=5.6e-10 Score=106.95 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=47.3
Q ss_pred cChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhC
Q 013476 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (442)
Q Consensus 229 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g 304 (442)
++...+.+.|.+.+. +++|+++++|+++..++++ ++ |++ .+|+ ++.||.||.|+|.+| .+.+.++
T Consensus 125 i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~--v~-v~~---~~g~--~~~ad~vV~AdG~~S-~vR~~l~ 189 (398)
T 2xdo_A 125 INRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKK--WT-LTF---ENKP--SETADLVILANGGMS-KVRKFVT 189 (398)
T ss_dssp ECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSSS--EE-EEE---TTSC--CEEESEEEECSCTTC-SCCTTTC
T ss_pred ECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCCE--EE-EEE---CCCc--EEecCEEEECCCcch-hHHhhcc
Confidence 455677777776654 3789999999999988753 32 333 3443 689999999999998 4666554
No 88
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.10 E-value=1.6e-09 Score=104.95 Aligned_cols=39 Identities=31% Similarity=0.492 Sum_probs=34.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCCCCc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTS 110 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~g~s 110 (442)
+||||||||++|++||+.|+++|++|+|||+.+ +++.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 799999999999999999999999999999975 554443
No 89
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.09 E-value=2.1e-10 Score=114.44 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=51.6
Q ss_pred HHHHHHHHH-cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCce--EEE-EcCEEEEccCCC-hHHHhhhhCCC
Q 013476 236 VGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKE--FDT-YAKVVVNAAGPF-CDSVRKLADQN 306 (442)
Q Consensus 236 ~~l~~~~~~-~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~--~~i-~a~~VVlAtG~~-s~~l~~~~g~~ 306 (442)
..+++.+.+ .|++|++++.|++|..++ + +++||++.+..+|+. .++ .+|.||+|+|++ ++.|+...|+.
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~-~-~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNG-S-QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEET-T-EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeC-C-EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 345565655 599999999999999986 5 999999864224542 233 779999999996 57788777764
No 90
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.09 E-value=2.5e-09 Score=103.39 Aligned_cols=60 Identities=20% Similarity=0.296 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHH
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l 299 (442)
..+.++|.+.+++.|++|+++++|++|..++ + ++++|.. +| ..+.||.||+|+|.+...+
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~-~v~~v~~----~g--~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN-G-KVVGVKS----EG--EVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET-T-EEEEEEE----TT--EEEECSEEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-C-EEEEEEE----CC--eEEECCEEEECCCCCcccc
Confidence 6899999999999999999999999999877 5 8887763 33 4789999999999998543
No 91
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.09 E-value=3.7e-10 Score=113.79 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=49.9
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh-HHHhhhhCCC
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC-DSVRKLADQN 306 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s-~~l~~~~g~~ 306 (442)
.|++|++++.|++|..++++.+++||++.+..+|+..++.||.||+|+|... ..++...|+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 4899999999999998753228999999874567777899999999999864 5677766653
No 92
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.09 E-value=7.8e-10 Score=107.94 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=50.2
Q ss_pred cChHHHHHHHHHHHHHcCce--EecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 229 MNDSRLNVGLALTAALAGAA--VLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 229 ~~~~~l~~~l~~~~~~~Gv~--i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
.+...+...+.+.+++.|++ ++++++|+++..++++ ..+.|++.+..+|+..++.+|.||+|||.++.
T Consensus 98 ~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~-~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 98 PPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDS-QTFTVTVQDHTTDTIYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTT-TEEEEEEEETTTTEEEEEEESEEEECCCSSSS
T ss_pred CCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCC-CcEEEEEEEcCCCceEEEEcCEEEECCCCCCC
Confidence 34567778888888888998 9999999999887642 23345665422344467899999999998764
No 93
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.08 E-value=4.3e-10 Score=105.08 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
++||+|||||++|+++|+.|+++|.+|+||||...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 48999999999999999999999999999999863
No 94
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.08 E-value=2.5e-09 Score=103.99 Aligned_cols=65 Identities=11% Similarity=0.031 Sum_probs=47.6
Q ss_pred ChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCc-eEEEEcCEEEEccCCChH
Q 013476 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGK-EFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~-~~~i~a~~VVlAtG~~s~ 297 (442)
....+.+.+.+.+++.+..++++++|+++..++++|. |++.+..+|+ ...+.+|.||+|||.++.
T Consensus 113 ~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~---V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 113 HRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWV---VTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp BHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEE---EEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEE---EEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 3456777777778777889999999999988764333 4554322343 347899999999999874
No 95
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.08 E-value=7.2e-11 Score=110.75 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~---~G~~V~liEk~~ 104 (442)
+||+|||||++|+++|+.|++ +|++|+||||..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 599999999999999999999 999999999986
No 96
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.06 E-value=1.2e-09 Score=108.41 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA 303 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~ 303 (442)
..+.++|.+.+.+.|++|+++++|++|..++. ++ ++ .+|+ .+.||.||.+.-. ..|.+.+
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~--~v---~~---~~G~--~~~ad~vI~t~P~--~~l~~~l 281 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNK--TV---TL---QDGT--TIGYKKLVSTMAV--DFLAEAM 281 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTT--EE---EE---TTSC--EEEEEEEEECSCH--HHHHHHT
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCC--EE---EE---cCCC--EEECCEEEECCCH--HHHHHhc
Confidence 57888898888899999999999999988763 44 33 3454 7899999988764 3344443
No 97
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.06 E-value=1.3e-09 Score=107.46 Aligned_cols=67 Identities=15% Similarity=0.029 Sum_probs=51.5
Q ss_pred HHHHHHHHc-CceEecCeEEEEEEEcCCCCeEEEEEEEECCCC---ceEEEEcCEEEEccCCC-hHHHhhhhC
Q 013476 237 GLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSG---KEFDTYAKVVVNAAGPF-CDSVRKLAD 304 (442)
Q Consensus 237 ~l~~~~~~~-Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g---~~~~i~a~~VVlAtG~~-s~~l~~~~g 304 (442)
.++..++++ +++|++++.|++|+.++++.+++||++.+ .+| +..+++|+.||+|+|++ ++.|+...|
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID-EQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 445555566 59999999999999986331799999874 244 24679999999999997 777877766
No 98
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.05 E-value=3e-10 Score=105.43 Aligned_cols=57 Identities=12% Similarity=-0.077 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
+..+...+.+.+++.|+++++ ++|+++..+++. + -|.. .++ ..+.+|.||+|||...
T Consensus 69 ~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~-~v~~---~~g--~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 69 ASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE--F-VVKT---KRK--GEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C--E-EEEE---SSS--CEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE--E-EEEE---CCC--CEEEcCEEEECcCCCC
Confidence 356677778888888999998 899999887643 2 1333 233 3789999999999873
No 99
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.04 E-value=6e-09 Score=102.25 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC--CeEEEEeccCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRG--LRVGLVEREDF 105 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G--~~V~liEk~~~ 105 (442)
|.++||+|||||++|+++|++|+++| ++|+|+|+...
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 34689999999999999999999999 99999999863
No 100
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.03 E-value=8.1e-09 Score=102.37 Aligned_cols=74 Identities=14% Similarity=0.156 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH--HhhhhCCCC
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS--VRKLADQNV 307 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~--l~~~~g~~~ 307 (442)
+..+...+.+.+++.|++|+++++|+++..++++ +|.++.+.. .+|+ ..+.||.||+|+|...+. +++.+|+..
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-~v~~~~v~~-~~G~-~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~ 329 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANG-RVQAVVAMT-PNGE-MRIETDFVFLGLGEQPRSAELAKILGLDL 329 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTS-BEEEEEEEE-TTEE-EEEECSCEEECCCCEECCHHHHHHHTCCB
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCC-ceEEEEEEE-CCCc-EEEEcCEEEECcCCccCCccCHHHcCCcc
Confidence 3567788888899999999999999999986655 776555553 3332 379999999999987653 677777653
No 101
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.03 E-value=9.4e-10 Score=102.77 Aligned_cols=60 Identities=10% Similarity=0.074 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
...+...+.+.+++.|+++++++ |+++..+++ .+. +... .++....+.+|.||+|+|...
T Consensus 83 ~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~--~~~-v~~~--~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 83 GSELMDRMREQSTKFGTEIITET-VSKVDLSSK--PFK-LWTE--FNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSC-EEEEECSSS--SEE-EEET--TCSSSCCEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCC--EEE-EEEE--ecCCCcEEEeCEEEECcCCCc
Confidence 35677788888888999999998 999988764 332 2221 112234789999999999853
No 102
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.02 E-value=1.4e-09 Score=107.81 Aligned_cols=62 Identities=19% Similarity=0.060 Sum_probs=46.7
Q ss_pred ChHHHHHHHHHHHHHcCc--eEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 230 NDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
+...+...+.+.+++.|+ +++++++|+++..++++ ....|++ .+|+ ++.||.||+|||.++.
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~-~~~~V~~---~~G~--~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDE-NLWEVTT---DHGE--VYRAKYVVNAVGLLSA 148 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTT-TEEEEEE---TTSC--EEEEEEEEECCCSCCS
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCC-CEEEEEE---cCCC--EEEeCEEEECCccccc
Confidence 345677778888888898 89999999999987653 3333444 3443 7899999999998763
No 103
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.02 E-value=3.6e-10 Score=105.59 Aligned_cols=58 Identities=21% Similarity=0.119 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
+..+...+.+.+++.+++++++++|+++..+++. + .+.. .++ ..+.+|.||+|||..+
T Consensus 64 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~--~---~v~~-~~g--~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 64 AKDLVKGLVEQVAPFNPVYSLGERAETLEREGDL--F---KVTT-SQG--NAYTAKAVIIAAGVGA 121 (335)
T ss_dssp HHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTE--E---EEEE-TTS--CEEEEEEEEECCTTSE
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCE--E---EEEE-CCC--CEEEeCEEEECCCCCC
Confidence 3566777778888889999999999999887642 2 2222 233 3689999999999864
No 104
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.01 E-value=1.9e-09 Score=107.14 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=46.2
Q ss_pred ChHHHHHHHHHHHHHcCc--eEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 230 NDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
+...+...+.+.+++.|+ +++++++|+++..++++ ..+.|++ .+|+ ++.||.||+|||.++.
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~-~~w~V~~---~~G~--~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEG-LRWTVRT---DRGD--EVSARFLVVAAGPLSN 160 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTT-TEEEEEE---TTCC--EEEEEEEEECCCSEEE
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCC-CEEEEEE---CCCC--EEEeCEEEECcCCCCC
Confidence 345667777788888887 89999999999887653 3333444 3443 6899999999998763
No 105
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.00 E-value=1.6e-09 Score=100.09 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=34.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFS 106 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~ 106 (442)
..+|||+|||||++|++||++|++.|++|+||||..++
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~g 41 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPG 41 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 35699999999999999999999999999999997543
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.00 E-value=1.1e-09 Score=103.41 Aligned_cols=59 Identities=20% Similarity=0.081 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
+..+...+.+.+++.|++++++++|+++..++++ .+ .|.+ .++ ..+.+|.||+|+|..+
T Consensus 73 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~-~v~~---~~g--~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 73 AIDLVESLWAQAERYNPDVVLNETVTKYTKLDDG-TF-ETRT---NTG--NVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTS-CE-EEEE---TTS--CEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCc-eE-EEEE---CCC--cEEEeeEEEEccCCCc
Confidence 4567777888888889999999999999987643 22 2333 333 3789999999999964
No 107
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.98 E-value=5.1e-10 Score=104.33 Aligned_cols=57 Identities=19% Similarity=0.107 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCC
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~ 295 (442)
+..+...+.+.+++.|++++++++|+++..++++ ...|.. .++ .+.+|.||+|||..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~~v~~---~~g---~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 66 AQELINNLKEQMAKFDQTICLEQAVESVEKQADG--VFKLVT---NEE---THYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTS--CEEEEE---SSE---EEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCC--cEEEEE---CCC---EEEeCEEEECCCCC
Confidence 4567778888888889999999999999987652 122333 222 48999999999994
No 108
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.98 E-value=2e-09 Score=105.37 Aligned_cols=61 Identities=20% Similarity=0.145 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcC-CCCeEEE--EEEEECCCCceEEEEcCEEEEccCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDE-ASNRIIG--ARIRNNLSGKEFDTYAKVVVNAAGP 294 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~-~g~~v~g--V~~~~~~~g~~~~i~a~~VVlAtG~ 294 (442)
..+...+...+++.+++++++++|+++..++ ++ +.+. |...+ .+|+...+.+|.||+|||.
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~-~~~~~~V~~~~-g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAG-QVEALRVISRN-ADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETT-EEEEEEEEEEE-TTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCC-ceEEEEEEEec-CCCceEEEEeCEEEECCCC
Confidence 4556666667777799999999999998762 12 4443 33433 2344457999999999997
No 109
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.97 E-value=2.8e-09 Score=104.62 Aligned_cols=57 Identities=18% Similarity=0.084 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.+.|.+.+++.|++|+++++|++|..++++ ++.|.. ++ .++.||.||+|++.+.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~--~~~v~~----~~--~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG--RWKVSL----RD--SSLEADHVISAIPASV 290 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGG--CEEEEC----SS--CEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc--eEEEEE----CC--eEEEcCEEEECCCHHH
Confidence 478899999999999999999999999987643 223322 22 2689999999999864
No 110
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.97 E-value=1.1e-09 Score=101.01 Aligned_cols=58 Identities=17% Similarity=0.040 Sum_probs=41.9
Q ss_pred ChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
++..+...+.+.+++.|+++++ ++|+++..+++ .+. |.. .+++ .+.+|.||+|||..+
T Consensus 57 ~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~--~~~-v~~---~~g~--~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 57 SGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDS--HFV-ILA---EDGK--TFEAKSVIIATGGSP 114 (311)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETT--EEE-EEE---TTSC--EEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCC--EEE-EEE---cCCC--EEECCEEEECCCCCC
Confidence 3456667777778888999987 78999988764 321 222 3343 789999999999754
No 111
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.97 E-value=4.4e-09 Score=104.77 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=33.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.++||||||||++|+++|+.|++.|++|+|||+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 35899999999999999999999999999999986
No 112
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.97 E-value=2.5e-09 Score=106.19 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=44.8
Q ss_pred ChHHHHHHHHHHHHHcCc--eEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 230 NDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 230 ~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
....+...+.+.+++.|+ .++++++|+++..+++. ..+.|++ .+| .++.||.||+|+|.++.
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~-~~w~V~~---~~G--~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND-RLWEVTL---DNE--EVVTCRFLISATGPLSA 148 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG-TEEEEEE---TTT--EEEEEEEEEECCCSCBC
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC-CEEEEEE---CCC--CEEEeCEEEECcCCCCC
Confidence 345666777777788887 88999999999876543 3333444 344 37899999999998764
No 113
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.93 E-value=1.2e-08 Score=100.24 Aligned_cols=67 Identities=18% Similarity=0.112 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH-H--hhhhCCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS-V--RKLADQN 306 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~-l--~~~~g~~ 306 (442)
..+...+.+.+++.|++++++++|+++..+++ ++ .|++ .+| ..+.||.||+|+|...+. + ++.+|+.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v-~v~~---~~g--~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~ 301 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTEN--CY-NVVL---TNG--QTICADRVMLATGRVPNTTGLGLERAGVK 301 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSS--SE-EEEE---TTS--CEEEESEEEECCCEEECCTTCCHHHHTCC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC--EE-EEEE---CCC--cEEEcCEEEEeeCCCcCCCCCChhhcCce
Confidence 56777888888999999999999999988764 44 3444 344 378999999999985532 2 4455554
No 114
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.93 E-value=3.4e-09 Score=96.97 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
++||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4899999999999999999999999999999964
No 115
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.89 E-value=1.8e-09 Score=100.72 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
+..+...+.+.+++.|+++++++ |.++..++++|. |.+ + ...+.+|.||+|||.++
T Consensus 69 ~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~---v~~----~--~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 69 GVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFK---LFT----D--SKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEE---EEC----S--SEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEE---EEE----C--CcEEEcCEEEECCCCCc
Confidence 34667777788888999999987 999987764422 222 2 24789999999999875
No 116
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.89 E-value=4.8e-09 Score=102.47 Aligned_cols=68 Identities=22% Similarity=0.191 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEE-EEECCCCceEEEEcCEEEEccCCChHHH---hhhhCCC
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGAR-IRNNLSGKEFDTYAKVVVNAAGPFCDSV---RKLADQN 306 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~-~~~~~~g~~~~i~a~~VVlAtG~~s~~l---~~~~g~~ 306 (442)
...+...+.+.+++.|++|+++++|+++..++++ . ..|. + .+| . +.+|.||+|+|...+.. ++.+|+.
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~-~~v~~~---~~g--~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~ 281 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADG-R-RVATTM---KHG--E-IVADQVMLALGRMPNTNGLGLEAAGVR 281 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-C-EEEEES---SSC--E-EEESEEEECSCEEESCTTSSTGGGTCC
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCC-E-EEEEEc---CCC--e-EEeCEEEEeeCcccCCCCCCccccCce
Confidence 3567788888899999999999999999987654 3 3344 3 344 2 89999999999865422 4555544
No 117
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.89 E-value=2.3e-09 Score=99.06 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
.|||+|||||++|++||++|+++|++|+|||+...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 48999999999999999999999999999999754
No 118
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.89 E-value=6.4e-09 Score=96.61 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..+||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 41 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM 41 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 35899999999999999999999999999999974
No 119
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.88 E-value=1.1e-07 Score=93.29 Aligned_cols=63 Identities=17% Similarity=0.190 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+...+.+.+++.|++|++++++.++..++++ .+ .|++.+..+++...+.+|.||+|+|...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDG-KL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTS-CE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-cE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 456677788888999999999999999886654 44 3666653335556899999999999743
No 120
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.87 E-value=3.4e-08 Score=97.25 Aligned_cols=72 Identities=17% Similarity=0.062 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH--H-hhhhCCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS--V-RKLADQN 306 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~--l-~~~~g~~ 306 (442)
..+...+.+.+++.|++++++++++++..+++ .+ .|.+.+..+|+...+.+|.||+|+|...+. | +...|+.
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~--~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~ 313 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGD--GA-KVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVV 313 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETT--EE-EEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCC--EE-EEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCce
Confidence 45667778888899999999999999988764 33 356654223544689999999999975421 2 4445544
No 121
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.87 E-value=1.1e-08 Score=94.50 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEE-EeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGL-VEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~l-iEk~~~ 105 (442)
..+||+|||||++|+++|+.|+++|++|+| +||..+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~ 39 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP 39 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC
Confidence 458999999999999999999999999999 999543
No 122
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.86 E-value=1.1e-08 Score=94.86 Aligned_cols=35 Identities=29% Similarity=0.625 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.++||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 49 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV 49 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999954
No 123
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.84 E-value=8.1e-08 Score=94.68 Aligned_cols=57 Identities=19% Similarity=0.086 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcC-ceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~G-v~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.+.|.+.+++.| ++|+++++|++|..+++ .+. |+. .+|+ .+.||.||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~--~v~-v~~---~~g~--~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD--AAR-VTA---RDGR--EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS--SEE-EEE---TTCC--EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC--EEE-EEE---CCCC--EEEcCEEEECCCHHH
Confidence 578889999999898 99999999999998774 332 333 3443 689999999999754
No 124
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.84 E-value=3.4e-08 Score=96.88 Aligned_cols=39 Identities=28% Similarity=0.533 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSS 107 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~ 107 (442)
+.++||+|||||++||++|+.|+++|++|+|+|+.. +++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 345899999999999999999999999999999997 443
No 125
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.84 E-value=1.5e-07 Score=92.19 Aligned_cols=74 Identities=12% Similarity=-0.004 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCce--EEEEcCEEEEccCCChH--HH-hhhhCCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKE--FDTYAKVVVNAAGPFCD--SV-RKLADQN 306 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~--~~i~a~~VVlAtG~~s~--~l-~~~~g~~ 306 (442)
..+...+.+.+++.|++++++++++++..++++ ....|.+.+..+++. ..+.+|.||+|+|...+ .| ++.+|+.
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~-~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~ 306 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSG-LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 306 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSS-EEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCC-cEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCe
Confidence 556677788888999999999999999887654 333455543112322 57999999999997543 23 4555544
No 126
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.83 E-value=5.7e-08 Score=99.89 Aligned_cols=38 Identities=24% Similarity=0.446 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~ 107 (442)
..+||+|||||++|+++|+.|++.|++|+|+|+....+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 35899999999999999999999999999999986333
No 127
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.82 E-value=2.3e-08 Score=93.27 Aligned_cols=36 Identities=33% Similarity=0.383 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+..+||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 47 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS 47 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 456899999999999999999999999999999764
No 128
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.81 E-value=8.8e-08 Score=92.15 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCCC
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQNV 307 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~~ 307 (442)
+..+...+.+.++++|++|+++++|+++..++ + ++++|++. +|+ .+.||.||+|+|...+ .+++.+|+..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~-~v~~v~l~---dG~--~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 263 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-T-KVTGVRMQ---DGS--VIPADIVIVGIGIVPCVGALISAGASG 263 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-S-BEEEEEES---SSC--EEECSEEEECSCCEESCHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-C-cEEEEEeC---CCC--EEEcCEEEECCCCccChHHHHhCCCCc
Confidence 46777888888999999999999999998876 5 88888874 443 7899999999998654 4777776653
No 129
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.80 E-value=1.4e-08 Score=94.03 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+.+||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 38 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME 38 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC
Confidence 34899999999999999999999999999999753
No 130
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.80 E-value=3.6e-09 Score=95.94 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=32.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
++||+|||||++||+||+.|+++|++|+||||.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4999999999999999999999999999999986
No 131
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.80 E-value=6.3e-08 Score=94.94 Aligned_cols=35 Identities=34% Similarity=0.647 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.+|||+|||||++|+++|+.|++.|++|+||||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46999999999999999999999999999999986
No 132
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.79 E-value=2.6e-07 Score=90.81 Aligned_cols=63 Identities=16% Similarity=0.098 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+...+.+.+++.|+++++++.+.++...+++ .+ .|++.+..+|+...+.+|.||+|+|.-.
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~-~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTN-QL-QVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTS-CE-EEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCC-cE-EEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 456777788888999999999999999875544 43 3555542235545689999999999743
No 133
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.76 E-value=1.5e-07 Score=93.12 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=33.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+.++||+|||||++|+++|+.|++.|++|+||||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 456999999999999999999999999999999964
No 134
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.75 E-value=1.8e-07 Score=92.46 Aligned_cols=36 Identities=39% Similarity=0.542 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+.+|||||||+|.+|+++|..+++.|++|+|||+..
T Consensus 40 ~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 40 TYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp CSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 346999999999999999999999999999999875
No 135
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.74 E-value=3.6e-08 Score=96.29 Aligned_cols=34 Identities=35% Similarity=0.552 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
++||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4899999999999999999999999999999974
No 136
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.73 E-value=4e-08 Score=90.47 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCC-CCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEA-SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~-g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+...+.+.+++.|++++++++|+.+..+.+ + ....|.+ .++ ..+.+|.||+|||...
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~-~~~~v~~---~~g--~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEG-GLHQIET---ASG--AVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTT-CCEEEEE---TTS--CEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCC-ceEEEEE---CCC--CEEEeCEEEECcCCCc
Confidence 34566677777888999999999999976532 1 1222333 334 3689999999999864
No 137
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.72 E-value=5.7e-07 Score=87.86 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 231 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
+..+...+.+.+++.|++++++++|+++..+++ . ..|.+ ++ ..+.+|.||+|+|...+
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~-~~v~~----~~--~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDG--E-FVLTT----TH--GELRADKLLVATGRTPN 272 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEETT--E-EEEEE----TT--EEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--E-EEEEE----CC--cEEEcCEEEECCCCCcC
Confidence 356778888889999999999999999987652 2 23433 22 47999999999998764
No 138
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.70 E-value=9.1e-08 Score=94.68 Aligned_cols=36 Identities=31% Similarity=0.713 Sum_probs=33.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 68 ~~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
++..+||+|||||++|+++|++|++.|++|+|||+.
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~ 244 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER 244 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 456799999999999999999999999999999863
No 139
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.69 E-value=3.3e-07 Score=90.12 Aligned_cols=63 Identities=21% Similarity=0.162 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCC-----CeEEEEEEEECCCCceEEEEcCEEEEccCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEAS-----NRIIGARIRNNLSGKEFDTYAKVVVNAAGP 294 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g-----~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~ 294 (442)
.++.++|...+++.+..++++++|+++..++.+ +..+-|++.+..+|+...+.|+.||+|||.
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 456677777777777889999999999875421 123456777656777788999999999995
No 140
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.68 E-value=8.3e-08 Score=93.74 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
++||+|||||++|+++|+.|++.|++|+||||..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 4899999999999999999999999999999765
No 141
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.67 E-value=1.9e-07 Score=91.66 Aligned_cols=68 Identities=22% Similarity=0.162 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH--H-hhhhCCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS--V-RKLADQN 306 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~--l-~~~~g~~ 306 (442)
..+...+.+.++++|++|+++++|+++..++++ . ..|++ .+|+ .+.+|.||+|+|...+. | ++.+|+.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~-~~v~~---~~G~--~i~~D~vv~a~G~~p~~~~L~l~~~gl~ 301 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADG-T-RHVVF---ESGA--EADYDVVMLAIGRVPRSQTLQLEKAGVE 301 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTS-C-EEEEE---TTSC--EEEESEEEECSCEEESCTTSCGGGGTCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-E-EEEEE---CCCc--EEEcCEEEEccCCCcCccccCchhcCcc
Confidence 466778888889999999999999999887643 2 33444 3443 78999999999986542 3 4555554
No 142
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.67 E-value=1.3e-07 Score=92.85 Aligned_cols=34 Identities=44% Similarity=0.781 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4899999999999999999999999999999964
No 143
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.66 E-value=2.1e-07 Score=95.35 Aligned_cols=62 Identities=11% Similarity=0.046 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhh
Q 013476 233 RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRK 301 (442)
Q Consensus 233 ~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~ 301 (442)
.+...+.+.+++.|++|+++++|+++..++ +.+....+++...+.||.||+|+|...+ .+..
T Consensus 568 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-------~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~ 630 (690)
T 3k30_A 568 FEVNRIQRRLIENGVARVTDHAVVAVGAGG-------VTVRDTYASIERELECDAVVMVTARLPREELYL 630 (690)
T ss_dssp TCHHHHHHHHHHTTCEEEESEEEEEEETTE-------EEEEETTTCCEEEEECSEEEEESCEEECCHHHH
T ss_pred hhHHHHHHHHHHCCCEEEcCcEEEEEECCe-------EEEEEccCCeEEEEECCEEEECCCCCCChHHHH
Confidence 345677788889999999999999997432 1222213455668999999999998543 3444
No 144
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.66 E-value=8.4e-08 Score=94.09 Aligned_cols=34 Identities=35% Similarity=0.640 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
++||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 4899999999999999999999999999999964
No 145
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.64 E-value=1.9e-07 Score=91.54 Aligned_cols=36 Identities=42% Similarity=0.578 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
.++||+|||||++|+++|+.|++.|++|+|||++.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 45 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKAL 45 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 458999999999999999999999999999999753
No 146
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.64 E-value=9.6e-08 Score=93.51 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
..||||||||++|+++|+.|+++ |.+|+|||+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 47999999999999999999998 99999999985
No 147
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.63 E-value=2e-07 Score=91.16 Aligned_cols=36 Identities=33% Similarity=0.615 Sum_probs=33.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+.++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~ 39 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 39 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 456999999999999999999999999999999985
No 148
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.63 E-value=2.5e-07 Score=90.45 Aligned_cols=34 Identities=38% Similarity=0.733 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
++||+|||||++|+++|++|++.|++|+|||+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4899999999999999999999999999999985
No 149
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.61 E-value=1.6e-07 Score=94.60 Aligned_cols=36 Identities=31% Similarity=0.349 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
+...||||||||++|+++|+.|++. |.+|+|||+.+
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4568999999999999999999998 89999999986
No 150
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=2.7e-07 Score=89.88 Aligned_cols=35 Identities=34% Similarity=0.572 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
++||+|||||++|+++|..|++.|++|+|||+..+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 37 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNL 37 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 48999999999999999999999999999999743
No 151
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.57 E-value=1.5e-07 Score=91.51 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=32.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
..+||||||||++|+++|+.|++. |.+|+|||+.+
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 347999999999999999999998 88999999985
No 152
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.57 E-value=3.1e-07 Score=90.49 Aligned_cols=35 Identities=31% Similarity=0.530 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCeEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATR---GLRVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~---G~~V~liEk~~~ 105 (442)
++||||||||++|+++|++|++. |++|+|||+..+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~ 39 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGI 39 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCc
Confidence 48999999999999999999999 999999999873
No 153
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.56 E-value=1.8e-07 Score=90.91 Aligned_cols=33 Identities=21% Similarity=0.536 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
.||||||||++|+++|+.|++. |.+|+|||+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 6999999999999999999998 99999999986
No 154
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.55 E-value=2.5e-07 Score=89.97 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
+||||||||++|+++|..|++. |.+|+|||+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999985
No 155
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.52 E-value=6.7e-08 Score=92.78 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~---~G~~V~liEk~~ 104 (442)
.||||||||++|+++|+.|++ .|++|+|||+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 489999999999999999999 899999999975
No 156
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.52 E-value=1.4e-07 Score=92.66 Aligned_cols=36 Identities=14% Similarity=0.168 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC---CeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRG---LRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G---~~V~liEk~~ 104 (442)
++++||||||||++|+++|..|++.| .+|+|||+..
T Consensus 33 ~m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 33 RWGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred ccCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 34589999999999999999999988 9999999975
No 157
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.52 E-value=6.8e-08 Score=89.69 Aligned_cols=38 Identities=24% Similarity=0.399 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHH--CCCeEEEEeccCC
Q 013476 68 NSNPLDILVIGGGATGCGVALDAAT--RGLRVGLVEREDF 105 (442)
Q Consensus 68 ~~~~~DVvVVGaG~aGl~aA~~La~--~G~~V~liEk~~~ 105 (442)
+..++||+|||||++|++||++|++ .|++|+||||+..
T Consensus 62 ~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp HTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred hccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4567999999999999999999985 4999999999863
No 158
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.51 E-value=3.5e-07 Score=88.81 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
.||||||||++|+++|..|++. |.+|+|||+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 3899999999999999999998 99999999986
No 159
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.49 E-value=3.9e-07 Score=91.33 Aligned_cols=33 Identities=33% Similarity=0.429 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
.||||||||++|+++|++|+++ |.+|+|||+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~ 36 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGE 36 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4899999999999999999998 88999999985
No 160
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.49 E-value=1.4e-07 Score=89.55 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=32.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.+++.|||||||++|+++|..|.+.+.+|+|||+++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSS
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCC
Confidence 355899999999999999999977899999999985
No 161
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.49 E-value=7.3e-07 Score=87.63 Aligned_cols=32 Identities=41% Similarity=0.663 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCeEEEEec
Q 013476 71 PLDILVIGGGATGCGVALDAAT-RGLRVGLVER 102 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~-~G~~V~liEk 102 (442)
++||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 162
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.49 E-value=5.4e-07 Score=88.20 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+.++||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 345899999999999999999999999999999985
No 163
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.48 E-value=4.7e-07 Score=88.73 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
.||||||||++|+++|+.|++. |.+|+|||+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 6999999999999999999996 99999999986
No 164
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.46 E-value=7.8e-07 Score=86.75 Aligned_cols=35 Identities=40% Similarity=0.581 Sum_probs=33.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
++||+|||||++|+++|..|++.|++|+|||+..+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~ 40 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 58999999999999999999999999999999863
No 165
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.44 E-value=1.8e-07 Score=88.33 Aligned_cols=33 Identities=18% Similarity=0.408 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.||||||||++|+++|..|++.| +|+|||++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 479999999999999999999999 999999976
No 166
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.43 E-value=3.7e-07 Score=88.13 Aligned_cols=35 Identities=23% Similarity=0.444 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~~ 104 (442)
+.+||||||||++|+++|..|++.|. +|+|||+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 35899999999999999999999998 799999874
No 167
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.39 E-value=6.3e-07 Score=88.03 Aligned_cols=34 Identities=38% Similarity=0.683 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..+||||||||++|+++|++|++. ++|+|||+++
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 458999999999999999999999 9999999986
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.35 E-value=1.2e-06 Score=83.21 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRG--LRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G--~~V~liEk~~ 104 (442)
++||||||||++|+++|+.|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 489999999999999999999999 4699999864
No 169
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.34 E-value=1.7e-07 Score=90.69 Aligned_cols=33 Identities=24% Similarity=0.514 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~---~G~~V~liEk~~ 104 (442)
.||||||||++|+++|+.|++ .|++|+|||+.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 699999999999999999999 899999999975
No 170
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.34 E-value=5e-06 Score=79.46 Aligned_cols=66 Identities=14% Similarity=0.151 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCCC
Q 013476 235 NVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQNV 307 (442)
Q Consensus 235 ~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~~ 307 (442)
...+.+.++++|++++++++|+++..++ + ++.+|++. +|+ .+.||.||+|+|...+ .+++.+|+..
T Consensus 187 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~-~v~~V~~~---dG~--~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 187 SSYFHDRHSGAGIRMHYGVRATEIAAEG-D-RVTGVVLS---DGN--TLPCDLVVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---TSC--EEECSEEEECCCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEecC-C-cEEEEEeC---CCC--EEEcCEEEECcCCccCHHHHHhCCCCC
Confidence 3455566778999999999999998876 5 88888773 444 7899999999998654 4777777653
No 171
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.34 E-value=2.2e-06 Score=90.89 Aligned_cols=35 Identities=34% Similarity=0.563 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..+||||||+|++|+++|+.|++.|++|+|||+++
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999975
No 172
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.33 E-value=8.8e-06 Score=82.00 Aligned_cols=35 Identities=29% Similarity=0.540 Sum_probs=32.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...+||+|||||++|+++|..|++.|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45699999999999999999999999999999984
No 173
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.31 E-value=2.6e-07 Score=91.49 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=35.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEeccC-CCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVERED-FSS 107 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G-~~V~liEk~~-~~~ 107 (442)
+..+||+|||||++||+||+.|+++| ++|+|+|+.+ +++
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 44589999999999999999999999 9999999997 444
No 174
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.30 E-value=7.3e-07 Score=85.47 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCe--EEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLR--VGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~--V~liEk~~ 104 (442)
.||||||||++|+++|+.|+++|.+ |+|||+.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 5899999999999999999999987 99999975
No 175
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.30 E-value=6e-07 Score=84.21 Aligned_cols=39 Identities=23% Similarity=0.375 Sum_probs=34.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc-C-CCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE-D-FSS 107 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~-~-~~~ 107 (442)
...+||+|||||++||++|+.|+++|++|+|+|+. . +++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 34689999999999999999999999999999998 5 443
No 176
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.30 E-value=6.4e-07 Score=88.09 Aligned_cols=40 Identities=25% Similarity=0.513 Sum_probs=35.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~g 108 (442)
++.+||+|||||++||+||+.|+++|++|+|+|+....+|
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 3458999999999999999999999999999999974444
No 177
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.29 E-value=6.8e-07 Score=86.13 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=34.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEeccC-CCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVERED-FSS 107 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G-~~V~liEk~~-~~~ 107 (442)
.+++||+|||||++||+||++|+++| ++|+|+|+.+ +++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 34689999999999999999999999 8999999986 444
No 178
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.28 E-value=5.5e-07 Score=85.15 Aligned_cols=39 Identities=33% Similarity=0.517 Sum_probs=35.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSS 107 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~ 107 (442)
+..+||+|||||++|+++|++|+++|++|+|+|+.+ +++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 456999999999999999999999999999999986 443
No 179
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.28 E-value=1e-05 Score=79.09 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=46.0
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH---HhhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS---VRKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~---l~~~~g~~ 306 (442)
.+.+.+++.|++++++++++++..++++ ....|.+.+..+++...+.+|.||+|+|...+. +++.+|+.
T Consensus 229 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~ 300 (478)
T 1v59_A 229 ATQKFLKKQGLDFKLSTKVISAKRNDDK-NVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLE 300 (478)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEETTT-TEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEecCC-CeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCce
Confidence 4455667789999999999999872112 344566653223445679999999999986532 34544443
No 180
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.27 E-value=9.1e-07 Score=84.67 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~~ 104 (442)
.||||||||++|+++|++|+++|+ +|+|||+++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999999 899999975
No 181
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.27 E-value=6e-07 Score=85.71 Aligned_cols=39 Identities=31% Similarity=0.465 Sum_probs=34.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCeEEEEeccC-CCCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATR-GLRVGLVERED-FSSG 108 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~-G~~V~liEk~~-~~~g 108 (442)
.++||+|||||++||++|+.|+++ |++|+|+|+++ +++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 369999999999999999999999 99999999996 4443
No 182
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.27 E-value=7.5e-06 Score=77.67 Aligned_cols=63 Identities=17% Similarity=0.036 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
..+.+.+++.|++++++++|+++..+++ .+ .|++ .+| ..+.||.||+|+|...+ .+++.+|+.
T Consensus 191 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~---~~g--~~i~~d~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 191 KAVQAGLEGLGVRFHLGPVLASLKKAGE--GL-EAHL---SDG--EVIPCDLVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHHHTTTCEEEESCCEEEEEEETT--EE-EEEE---TTS--CEEEESEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEecCC--EE-EEEE---CCC--CEEECCEEEECcCCCcCHHHHHHCCCC
Confidence 4455666778999999999999987653 32 3444 344 37899999999998765 377777655
No 183
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.26 E-value=2.9e-06 Score=81.91 Aligned_cols=48 Identities=15% Similarity=0.226 Sum_probs=36.2
Q ss_pred HHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCC
Q 013476 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (442)
Q Consensus 243 ~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~ 295 (442)
++.|++++.+++|+++..+.. .+ .+....++....+.+|++|+|||..
T Consensus 68 ~~~~i~~~~~~~V~~id~~~~--~~---~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDERQ--TV---SVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHCCEEEETEEEEEEETTTT--EE---EEEETTTTEEEEEECSEEEECCCEE
T ss_pred HhcCCEEEeCCeEEEEEccCc--EE---EEEeccCCceEEEEcCEEEECCCCc
Confidence 457999999999999987663 33 3333345566789999999999974
No 184
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.25 E-value=1.3e-05 Score=73.80 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=44.2
Q ss_pred HHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCC-CceEEEEcCEEEEccCCCh
Q 013476 238 LALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLS-GKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 238 l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~-g~~~~i~a~~VVlAtG~~s 296 (442)
+.+.+++.|++++++++++++..++ + ++.+|++.+..+ |+...+.+|.||+|+|...
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~~-~-~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGDQ-M-GVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEECS-S-SEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHhcccCCeEEEcCceeEEEEcCC-C-ceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 3445567899999999999998876 4 788888874223 5556899999999999754
No 185
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.25 E-value=7.6e-07 Score=88.25 Aligned_cols=35 Identities=34% Similarity=0.519 Sum_probs=33.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
++||||||||++||+||+.|+++|++|+|+|+++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~ 38 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDR 38 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 48999999999999999999999999999999863
No 186
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.24 E-value=5.4e-07 Score=87.67 Aligned_cols=38 Identities=26% Similarity=0.486 Sum_probs=34.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSS 107 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~ 107 (442)
.++||+|||||++||+||++|+++|++|+|+|++. +++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 35899999999999999999999999999999986 443
No 187
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.23 E-value=6.5e-07 Score=86.38 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+.+||+|||||++|+++|+.|+++|++|+||||..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 44899999999999999999999999999999985
No 188
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.21 E-value=1.5e-05 Score=76.74 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=47.8
Q ss_pred HHHHHHHHcCceEecCeEEEEEEE--cCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIK--DEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~--~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
.+.+.+++.|++++++++++++.. ++ + ++.+|++. +| ..+.||.||+|+|...+ .+++.+|+.
T Consensus 196 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~-~v~~v~~~---~G--~~i~~D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 196 FYEHLHREAGVDIRTGTQVCGFEMSTDQ-Q-KVTAVLCE---DG--TRLPADLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECTTT-C-CEEEEEET---TS--CEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEeccCC-C-cEEEEEeC---CC--CEEEcCEEEECCCCCcCcchhhccCCC
Confidence 445566778999999999999987 44 5 77777663 44 37899999999997643 577777665
No 189
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.18 E-value=5.2e-05 Score=72.98 Aligned_cols=64 Identities=13% Similarity=0.018 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCC
Q 013476 234 LNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (442)
Q Consensus 234 l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~ 305 (442)
..+.+.+.++++|+++++++.|++++. + ++ .+++ .+|+..++.+|.||+|+|.-.+.++...+.
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~~---~-~~---~~~~-~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~ 265 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP---D-KV---IYED-LNGNTHEVPAKFTMFMPSFQGPEVVASAGD 265 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS---S-EE---EEEC-TTSCEEEEECSEEEEECEEECCHHHHTTCT
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEeC---C-ce---EEEe-eCCCceEeecceEEEeccCCCchHHHhccc
Confidence 445566777889999999999998843 2 33 4444 456677899999999999877677766543
No 190
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.17 E-value=9.2e-07 Score=83.38 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=33.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC-CCC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED-FSS 107 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~-~~~ 107 (442)
+||+|||||++|+++|++|+++|++|+|+|++. +++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 799999999999999999999999999999986 443
No 191
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.15 E-value=1e-05 Score=77.45 Aligned_cols=64 Identities=13% Similarity=0.039 Sum_probs=48.1
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCCC
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQNV 307 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~~ 307 (442)
..+.+.++++|++|+++++++++..++ ++.+|++ .+|+ .+.||.||+|+|...+ .+++.+|+..
T Consensus 189 ~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~---~dg~--~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (410)
T 3ef6_A 189 AWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMA---SDGR--SFVADSALICVGAEPADQLARQAGLAC 253 (410)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEE---TTSC--EEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEE---CCCC--EEEcCEEEEeeCCeecHHHHHhCCCcc
Confidence 345556677899999999999997754 5556666 3443 7899999999998664 5777777653
No 192
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.14 E-value=1.6e-06 Score=85.52 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCCCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~~~ 107 (442)
.+||+|||||++||++|+.|+++|++|+|+|+.+..+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4899999999999999999999999999999997433
No 193
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.14 E-value=1.8e-06 Score=81.86 Aligned_cols=36 Identities=25% Similarity=0.555 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
+++||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 37 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 37 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 358999999999999999999999999999999863
No 194
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.13 E-value=2.5e-05 Score=71.94 Aligned_cols=61 Identities=16% Similarity=0.177 Sum_probs=46.1
Q ss_pred HHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCC
Q 013476 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQ 305 (442)
Q Consensus 243 ~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~ 305 (442)
++.|++++++++++++..++ + ++.+|.+.+..+|+...+.+|.||+|+|...+ .+++.+|+
T Consensus 201 ~~~gv~i~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 201 KKRNIPYIMNAQVTEIVGDG-K-KVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HHTTCCEECSEEEEEEEESS-S-SEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCC
T ss_pred hcCCcEEEcCCeEEEEecCC-c-eEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccc
Confidence 35799999999999998875 4 78888887533565567999999999987543 45555444
No 195
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.13 E-value=9.4e-07 Score=86.79 Aligned_cols=60 Identities=20% Similarity=0.079 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+...+.+.+++. ++++++++++++..+++ ++. |.+.+ .+|+...+.+|.||+|+|...
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~--~v~-v~~~~-~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKED--AVE-VIYFD-KSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSS--SEE-EEEEC-TTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCC--EEE-EEEEe-CCCceEEEECCEEEEeeCCcc
Confidence 46667777777777 99999999999988764 443 44432 255556899999999999854
No 196
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.08 E-value=3e-06 Score=82.99 Aligned_cols=39 Identities=31% Similarity=0.370 Sum_probs=34.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEeccC-CCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVERED-FSS 107 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G-~~V~liEk~~-~~~ 107 (442)
++.+||+|||||++||++|++|+++| .+|+|+|+.+ +++
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 45689999999999999999999998 7999999996 444
No 197
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.08 E-value=5.9e-05 Score=73.41 Aligned_cols=67 Identities=15% Similarity=0.095 Sum_probs=44.9
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH-H--hhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS-V--RKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~-l--~~~~g~~ 306 (442)
.+.+.+++.|++++++++++++..+++ .+ .|.+.+..+|+...+.+|.||+|+|...+. + ++.+|+.
T Consensus 215 ~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~ 284 (464)
T 2eq6_A 215 LLRRALEKEGIRVRTKTKAVGYEKKKD--GL-HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVK 284 (464)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEETT--EE-EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCC
T ss_pred HHHHHHHhcCCEEEcCCEEEEEEEeCC--EE-EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCce
Confidence 345556778999999999999987763 43 355542111544579999999999975532 1 3445544
No 198
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.06 E-value=3.8e-05 Score=72.05 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=47.1
Q ss_pred HHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 242 AALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 242 ~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
.++.|++++++++++++..++ + ++.+|++.. .+|+...+.+|.||+|+|...+ .+++.+++.
T Consensus 212 ~~~~gv~i~~~~~v~~i~~~~-~-~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~ 274 (360)
T 3ab1_A 212 RANGTIDVYLETEVASIEESN-G-VLTRVHLRS-SDGSKWTVEADRLLILIGFKSNLGPLARWDLE 274 (360)
T ss_dssp HHHTSEEEESSEEEEEEEEET-T-EEEEEEEEE-TTCCEEEEECSEEEECCCBCCSCGGGGGSSCC
T ss_pred hhcCceEEEcCcCHHHhccCC-C-ceEEEEEEe-cCCCeEEEeCCEEEECCCCCCCHHHHHhhccc
Confidence 456799999999999998876 5 888888863 4565568999999999997543 356655443
No 199
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=2.8e-06 Score=83.59 Aligned_cols=60 Identities=13% Similarity=0.118 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
..+...+.+.++++|++++++++++++..++++ .+ .|++ .+|+. .+.+|.||+|+|...+
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~-~v~~---~~g~~-~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDK-NL-SIHL---SDGRI-YEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTT-CE-EEEE---TTSCE-EEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCc-eE-EEEE---CCCcE-EEECCEEEECCCCCcC
Confidence 466777888889999999999999999876543 32 3444 34542 4899999999998654
No 200
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.04 E-value=7.6e-05 Score=72.85 Aligned_cols=68 Identities=13% Similarity=0.026 Sum_probs=46.0
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HH--hhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SV--RKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l--~~~~g~~ 306 (442)
.+.+.+++.|++++++++|+++..++++ .+ .|.+.+..+++...+.+|.||+|+|...+ .+ ++.+|+.
T Consensus 225 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~ 295 (474)
T 1zmd_A 225 NFQRILQKQGFKFKLNTKVTGATKKSDG-KI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIE 295 (474)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECTTS-CE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCC
T ss_pred HHHHHHHHCCCEEEeCceEEEEEEcCCc-eE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCc
Confidence 4455667789999999999999887643 23 34443211334457999999999998653 22 4555654
No 201
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.04 E-value=7.6e-05 Score=68.31 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=40.6
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
.|++++++++++++..++ + ++.+|++++..+|+...+.+|.||+|+|.-.
T Consensus 193 ~gv~v~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDG-S-KVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp TTEEEESSEEEEEEEESS-S-SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCeEEecCCceEEEEcCC-C-cEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 589999999999998765 5 8888988763356556899999999998643
No 202
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.04 E-value=5.4e-05 Score=74.01 Aligned_cols=65 Identities=8% Similarity=0.041 Sum_probs=45.0
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HH-hhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SV-RKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l-~~~~g~~ 306 (442)
.+.+.+++.|++++++++|+++..++++ ++..|.+ .+|+ ..+.+|.||+|+|...+ .| ++.+|+.
T Consensus 231 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~~v~~---~~G~-~~i~~D~vv~a~G~~p~~~l~l~~~gl~ 297 (479)
T 2hqm_A 231 TITDHYVKEGINVHKLSKIVKVEKNVET-DKLKIHM---NDSK-SIDDVDELIWTIGRKSHLGMGSENVGIK 297 (479)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECC-C-CCEEEEE---TTSC-EEEEESEEEECSCEEECCCSSGGGGTCC
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEEcCCC-cEEEEEE---CCCc-EEEEcCEEEECCCCCCccccChhhcCce
Confidence 4455567789999999999999876544 3444555 3442 47999999999997543 34 4555554
No 203
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.04 E-value=4.1e-05 Score=74.86 Aligned_cols=62 Identities=11% Similarity=0.026 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
..+.+.+++.|++++++++++++..+ + ++..|.. ++ ..+.||.||+|+|...+ .+++.+|+.
T Consensus 231 ~~l~~~l~~~Gv~i~~~~~v~~i~~~--~-~v~~v~~----~~--~~i~~D~vi~a~G~~p~~~~l~~~g~~ 293 (480)
T 3cgb_A 231 EYIYKEADKHHIEILTNENVKAFKGN--E-RVEAVET----DK--GTYKADLVLVSVGVKPNTDFLEGTNIR 293 (480)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEES--S-BEEEEEE----TT--EEEECSEEEECSCEEESCGGGTTSCCC
T ss_pred HHHHHHHHHcCcEEEcCCEEEEEEcC--C-cEEEEEE----CC--CEEEcCEEEECcCCCcChHHHHhCCcc
Confidence 34556667789999999999999875 3 6655544 22 37999999999998653 456655544
No 204
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.04 E-value=2.9e-06 Score=82.69 Aligned_cols=68 Identities=18% Similarity=0.068 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH--H-hhhhCCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS--V-RKLADQN 306 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~--l-~~~~g~~ 306 (442)
..+...+.+.+++.|++++++++|+++..+++ . ..|++ .+|+. .+.+|.||+|+|...+. | ++.+|+.
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~-~~v~~---~~G~~-~i~~D~vv~a~G~~p~~~~l~~~~~g~~ 277 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQ--G-TTLVA---QDGTR-LEGFDSVIWAVGRAPNTRDLGLEAAGIE 277 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETT--E-EEEEE---TTCCE-EEEESEEEECSCEEESCTTSCHHHHTCC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--e-EEEEE---eCCcE-EEEcCEEEECCCCCcCCCCCCchhcCCc
Confidence 45667788888899999999999999987664 3 23444 34432 78999999999986532 3 4555554
No 205
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=8.4e-05 Score=72.11 Aligned_cols=55 Identities=15% Similarity=0.066 Sum_probs=40.2
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
.+.+.+++.|++++++++++++..+++ .+ .|.+.. +|+...+.+|.||+|+|...
T Consensus 216 ~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~~--~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 216 IIKKRLKKKGVEVVTNALAKGAEERED--GV-TVTYEA--NGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEEEETT--EE-EEEEEE--TTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeCC--eE-EEEEEe--CCceeEEEcCEEEECcCCCc
Confidence 344556778999999999999987663 43 244432 33456799999999999865
No 206
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.03 E-value=6.1e-05 Score=69.81 Aligned_cols=64 Identities=17% Similarity=0.044 Sum_probs=47.0
Q ss_pred HHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 240 LTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 240 ~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
+.+++.|+++++++.+.++..+ + ++.+|+++...+|+...+.+|.||+|+|...+ .+++.+++.
T Consensus 199 ~~l~~~gv~v~~~~~v~~i~~~--~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~ 263 (335)
T 2zbw_A 199 KAHEEGRLEVLTPYELRRVEGD--E-RVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLA 263 (335)
T ss_dssp HHHHTTSSEEETTEEEEEEEES--S-SEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCC
T ss_pred hccccCCeEEecCCcceeEccC--C-CeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhccee
Confidence 3445679999999999999874 3 67778886422565568999999999998654 366655443
No 207
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.03 E-value=3.4e-06 Score=83.03 Aligned_cols=35 Identities=29% Similarity=0.544 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..+||+|||||++||++|+.|+++|.+|+|+|+.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 46899999999999999999999999999999986
No 208
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.03 E-value=5.6e-05 Score=70.02 Aligned_cols=50 Identities=18% Similarity=0.133 Sum_probs=42.1
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
.|+++++++++.++..++ + ++.+|++++..+++...+.+|.||+|+|...
T Consensus 222 ~gv~i~~~~~v~~i~~~~-~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 222 EKIEILYNTVALEAKGDG-K-LLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp TTEEEECSEEEEEEEESS-S-SEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred CCeEEeecceeEEEEccc-C-cEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 489999999999999877 4 7888998864456667899999999999754
No 209
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.03 E-value=3.9e-05 Score=74.29 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...+|+|||+|.+|+.+|..|++.|.+|+|+|+.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 45799999999999999999999999999999864
No 210
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.02 E-value=4.5e-06 Score=77.33 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=31.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+||+|||||.+|+.+|+.|+++|++|+|||+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 699999999999999999999999999999975
No 211
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.00 E-value=5.8e-05 Score=73.27 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|.+|+.+|..|++.|.+|+|+|+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3579999999999999999999999999999864
No 212
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.00 E-value=2.7e-06 Score=82.60 Aligned_cols=68 Identities=12% Similarity=0.142 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH--H-hhhhCCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS--V-RKLADQN 306 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~--l-~~~~g~~ 306 (442)
..+...+.+.+++.|++++++++++++..++++ .+ .|++ .+|+ .+.+|.||+|+|...+. | ++.+|+.
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~-~v~~---~~g~--~i~~D~vv~a~G~~p~~~~l~~~~~gl~ 278 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDG-SL-TLEL---EDGR--SETVDCLIWAIGREPANDNINLEAAGVK 278 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTS-CE-EEEE---TTSC--EEEESEEEECSCEEESCTTSCHHHHTCC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCc-EE-EEEE---CCCc--EEEcCEEEECCCCCcCCCCCCchhcCce
Confidence 456778888888999999999999999886543 32 3444 3443 78999999999986532 3 4555654
No 213
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.00 E-value=6.5e-05 Score=72.79 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4589999999999999999999999999999874
No 214
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.00 E-value=3.4e-06 Score=79.99 Aligned_cols=51 Identities=16% Similarity=0.004 Sum_probs=41.0
Q ss_pred ccChHHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 228 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
.++...+...|.+.+++.|++++++++|+++.... .+.||.||.|+|.+|.
T Consensus 94 ~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-------------------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 94 GVERRGLVHALRDKCRSQGIAIRFESPLLEHGELP-------------------LADYDLVVLANGVNHK 144 (381)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGCC-------------------GGGCSEEEECCGGGGG
T ss_pred eecHHHHHHHHHHHHHHCCCEEEeCCEeccchhcc-------------------cccCCEEEECCCCCch
Confidence 35567888999999999999999999998774310 2468999999999995
No 215
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.98 E-value=8e-05 Score=72.43 Aligned_cols=34 Identities=32% Similarity=0.399 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 3579999999999999999999999999999874
No 216
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.96 E-value=6.8e-06 Score=79.62 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=33.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
..+||+|||||++|+++|+.|++.|++|+|||+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 458999999999999999999999999999999863
No 217
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.95 E-value=6.3e-05 Score=73.41 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCCC
Q 013476 235 NVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQNV 307 (442)
Q Consensus 235 ~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~~ 307 (442)
...+.+.+++.|++++++++|+++..++ + ++. |++. +|+ .+.||.||+|+|...+ .+++.+|+..
T Consensus 205 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~-~v~-v~~~---~g~--~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 270 (472)
T 3iwa_A 205 SQMLRHDLEKNDVVVHTGEKVVRLEGEN-G-KVA-RVIT---DKR--TLDADLVILAAGVSPNTQLARDAGLEL 270 (472)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESS-S-BEE-EEEE---SSC--EEECSEEEECSCEEECCHHHHHHTCCB
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEccC-C-eEE-EEEe---CCC--EEEcCEEEECCCCCcCHHHHHhCCccC
Confidence 3455566678899999999999998865 4 665 5553 343 7899999999998653 5777777653
No 218
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=4.4e-06 Score=81.24 Aligned_cols=57 Identities=19% Similarity=0.047 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+...+.+.+++.|++++++++|+++.. + + +.+.. .+|+...+.+|.||+|+|...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~---~---v~v~~-~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN-G---C---LLAND-GKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET-T---E---EEEEC-SSSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe-C---C---EEEEE-CCCceEEEECCEEEECcCCCc
Confidence 45667778888889999999999999975 3 4 23332 344335789999999999754
No 219
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.92 E-value=7.3e-05 Score=72.75 Aligned_cols=50 Identities=18% Similarity=0.018 Sum_probs=39.2
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
.|++++++++|+++..+++ . ..|++++..+|+...+.+|.||+|||...+
T Consensus 329 ~~v~i~~~~~v~~v~~~~~--~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQ--G-IELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETT--E-EEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCC--E-EEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 5999999999999988764 3 346666544676667999999999997543
No 220
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.92 E-value=0.00011 Score=70.18 Aligned_cols=59 Identities=19% Similarity=0.135 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
..+.+.++++|++++++++++++. + + . |++ .+| ..+.||.||+|+|...+ .+++.+|+.
T Consensus 191 ~~l~~~l~~~GV~i~~~~~v~~i~-~--~-~---v~~---~~g--~~i~~D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 191 DFVARYHAAQGVDLRFERSVTGSV-D--G-V---VLL---DDG--TRIAADMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEE-T--T-E---EEE---TTS--CEEECSEEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHHHHcCcEEEeCCEEEEEE-C--C-E---EEE---CCC--CEEEcCEEEECcCCCccHHHHHhCCCC
Confidence 344556677899999999999998 3 3 3 344 344 37899999999998654 577777765
No 221
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.92 E-value=9.3e-05 Score=72.14 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=41.5
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
.+.+.+++.|+++++++++.++..+++ .+ .|.+.+..+|+...+.+|.||+|+|...+
T Consensus 223 ~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 223 QFQRSLEKQGMKFKLKTKVVGVDTSGD--GV-KLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHHHHHHSSCCEECSEEEEEEECSSS--SE-EEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEEcCC--eE-EEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 345566778999999999999987663 33 34554312344468999999999998653
No 222
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.92 E-value=5.9e-06 Score=80.32 Aligned_cols=58 Identities=12% Similarity=0.031 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~ 297 (442)
..+...+.+.+++.|++++++++|+++..+++ .+ .+.+ .++ ..+.+|.||+|+|...+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v-~v~~---~~g--~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK--GA-RVEL---EGG--EVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--EE-EEEE---TTS--CEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EE-EEEE---CCC--eEEEcCEEEECcCCCcC
Confidence 56677888888899999999999999988763 33 2332 233 37899999999998764
No 223
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.92 E-value=0.00011 Score=72.33 Aligned_cols=63 Identities=13% Similarity=0.100 Sum_probs=44.1
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHH-H--hhhhCCC
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS-V--RKLADQN 306 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~-l--~~~~g~~ 306 (442)
..+.+.+++.|++|+++++|+++..+++ ++ .+.. .+| ..+.||.||+|+|...+. + ++.+|+.
T Consensus 227 ~~l~~~l~~~GV~i~~~~~V~~i~~~~~--~v---~v~~-~~g--~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~ 292 (499)
T 1xdi_A 227 LVLEESFAERGVRLFKNARAASVTRTGA--GV---LVTM-TDG--RTVEGSHALMTIGSVPNTSGLGLERVGIQ 292 (499)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEEECSS--SE---EEEE-TTS--CEEEESEEEECCCEEECCSSSCTTTTTCC
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEeCC--EE---EEEE-CCC--cEEEcCEEEECCCCCcCCCcCCchhcCce
Confidence 3455666788999999999999988764 43 2322 333 378999999999987643 3 4444443
No 224
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.91 E-value=0.00019 Score=69.93 Aligned_cols=66 Identities=8% Similarity=0.026 Sum_probs=44.3
Q ss_pred HHHHHH-HHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HH--hhhhCCC
Q 013476 237 GLALTA-ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SV--RKLADQN 306 (442)
Q Consensus 237 ~l~~~~-~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l--~~~~g~~ 306 (442)
.+.+.+ ++.|++++++++|+++..+++ .+ .|.+.+ .+|+...+.+|.||+|+|...+ .+ ++.+|+.
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~~-~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~ 289 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNGD--SV-SLEVEG-KNGKRETVTCEALLVSVGRRPFTGGLGLDKINVA 289 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECSS--SE-EEEEEC-C---EEEEEESEEEECSCEEECCTTSCHHHHTCC
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcCC--eE-EEEEEc-CCCceEEEECCEEEECCCcccCCCCCCchhcCCc
Confidence 445556 778999999999999988764 32 344432 1343457999999999998653 23 4555554
No 225
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.89 E-value=0.00021 Score=65.58 Aligned_cols=59 Identities=12% Similarity=0.006 Sum_probs=47.1
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
.|+++++++++.++..++ ++.+|++.+..+|+...+.+|.||+|+|...+ .+++.+|+.
T Consensus 203 ~gv~~~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 203 PNVEFVLNSVVKEIKGDK---VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp TTEEEECSEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCC
T ss_pred CCcEEEeCCEEEEEeccC---ceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCee
Confidence 589999999999998763 67788887644566668999999999998665 677776655
No 226
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.89 E-value=1e-05 Score=79.06 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
..+||+|||||++|+++|+.|++.|+ +|+|+|+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~ 38 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATD 38 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 35899999999999999999999999 899999986
No 227
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.88 E-value=0.00013 Score=71.65 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-.|..|++.|.+|+|+|+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 209 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN 209 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC
Confidence 3579999999999999999999999999999975
No 228
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.88 E-value=0.00011 Score=72.07 Aligned_cols=63 Identities=13% Similarity=0.093 Sum_probs=44.2
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH--HH-hhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD--SV-RKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~--~l-~~~~g~~ 306 (442)
.+.+.++++|++|+++++|+++..++++ ...|++ .+|+ .+.||.||+|+|...+ .| ++.+|+.
T Consensus 240 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~~v~~---~~G~--~i~~D~vv~a~G~~p~~~~L~l~~~gl~ 305 (495)
T 2wpf_A 240 EVTKQLTANGIEIMTNENPAKVSLNTDG--SKHVTF---ESGK--TLDVDVVMMAIGRIPRTNDLQLGNVGVK 305 (495)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECTTS--CEEEEE---TTSC--EEEESEEEECSCEEECCGGGTGGGTTCC
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCCc--eEEEEE---CCCc--EEEcCEEEECCCCcccccccchhhcCcc
Confidence 4455667789999999999999887543 234544 3443 7999999999998543 23 4555544
No 229
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.88 E-value=0.00021 Score=69.54 Aligned_cols=65 Identities=15% Similarity=0.129 Sum_probs=44.5
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HH--hhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SV--RKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l--~~~~g~~ 306 (442)
.+.+.++++|++++++++++++..+++ .+ .+.+. .+|+...+.+|.||+|+|...+ .+ ++.+|+.
T Consensus 217 ~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~--~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~ 284 (464)
T 2a8x_A 217 EIEKQFKKLGVTILTATKVESIADGGS--QV-TVTVT--KDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVA 284 (464)
T ss_dssp HHHHHHHHHTCEEECSCEEEEEEECSS--CE-EEEEE--SSSCEEEEEESEEEECSCEEECCSSSCHHHHTCC
T ss_pred HHHHHHHHcCCEEEeCcEEEEEEEcCC--eE-EEEEE--cCCceEEEEcCEEEECCCCCccCCCCCchhcCCc
Confidence 344556678999999999999987663 33 24443 2454468999999999997543 22 4555554
No 230
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.86 E-value=0.00027 Score=64.57 Aligned_cols=57 Identities=16% Similarity=0.070 Sum_probs=43.2
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhh
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLA 303 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~ 303 (442)
.|+++++++++.++..++ + ++.+|++++..+|+...+.+|.||+|+|.-.+ .+++.+
T Consensus 192 ~gv~v~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDA-S-GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TTEEEETTEEEEEEEEET-T-EEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCT
T ss_pred CCeEEEeCCEEEEEECCC-C-cEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcc
Confidence 689999999999998775 3 77788887433565568999999999997543 455543
No 231
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.85 E-value=0.00012 Score=70.93 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.+.+++.|++++++++|+++..++ + ++..|.. +| ..+.||.||+|+|...
T Consensus 195 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~-~v~~v~~----~g--~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 195 DILAKDYEAHGVNLVLGSKVAAFEEVD-D-EIITKTL----DG--KEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHTTCEEEESSCEEEEEEET-T-EEEEEET----TS--CEEEESEEEECCCEEE
T ss_pred HHHHHHHHHCCCEEEcCCeeEEEEcCC-C-eEEEEEe----CC--CEEECCEEEECcCCCC
Confidence 345566678899999999999998754 4 7755543 33 3789999999999754
No 232
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.85 E-value=7.1e-05 Score=72.69 Aligned_cols=34 Identities=29% Similarity=0.596 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-+|+|||+|.+|+-+|..|++.|.+|+|+|+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 204 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 3579999999999999999999999999999975
No 233
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.84 E-value=0.00024 Score=65.42 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=39.3
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
.|++++++++++++..+ + ++.+|++++..+|+...+.+|.||+|+|.-.
T Consensus 201 ~gv~i~~~~~v~~i~~~--~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQGA--D-SVSGVKLRNLKTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp TTEEEECSEEEEEEEES--S-SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCceEecCCceEEEccC--C-cEEEEEEEECCCCcEEEEEcCEEEEccCCCC
Confidence 58999999999999875 3 7788888753356556899999999998654
No 234
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.82 E-value=0.00028 Score=69.06 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 4579999999999999999999999999999975
No 235
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.82 E-value=9.6e-05 Score=72.27 Aligned_cols=34 Identities=38% Similarity=0.572 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 218 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 218 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 3579999999999999999999999999999864
No 236
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.81 E-value=0.00019 Score=69.54 Aligned_cols=52 Identities=6% Similarity=-0.066 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.+.+++.|++|+++++|+++..++ + ++ .|.. .++ .+.||.||+|+|...
T Consensus 193 ~~l~~~l~~~GV~i~~~~~v~~i~~~~-~-~v-~v~~---~~g---~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 193 AEVQKSLEKQAVIFHFEETVLGIEETA-N-GI-VLET---SEQ---EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHTTTEEEEETCCEEEEEECS-S-CE-EEEE---SSC---EEEESEEEECSCCBC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEccC-C-eE-EEEE---CCC---EEEeCEEEECcCCCC
Confidence 455566677899999999999998766 3 55 4544 222 799999999999854
No 237
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.80 E-value=2e-05 Score=81.01 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
...+||+|||||++|+++|+.|+++|++|+|||+...
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3458999999999999999999999999999999863
No 238
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.79 E-value=0.0003 Score=70.27 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 3589999999999999999999999999999864
No 239
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.78 E-value=2e-05 Score=80.18 Aligned_cols=37 Identities=27% Similarity=0.461 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
...+||+|||+|++|+++|+.|++.|++|+|+|+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3458999999999999999999999999999999863
No 240
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.77 E-value=2.3e-05 Score=81.22 Aligned_cols=36 Identities=28% Similarity=0.473 Sum_probs=33.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
...||+|||+|++||++|+.|+++|++|+|+|+...
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 457999999999999999999999999999999863
No 241
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.77 E-value=0.00035 Score=68.13 Aligned_cols=56 Identities=14% Similarity=0.078 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.+.+++.|++++++++++++..+++ .+. |++.+ .+| ...+.+|.||+|+|...
T Consensus 225 ~~l~~~l~~~Gv~v~~~~~v~~i~~~~~--~~~-v~~~~-~~g-~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 225 KEAQKILTKQGLKILLGARVTGTEVKNK--QVT-VKFVD-AEG-EKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHTTEEEEETCEEEEEEECSS--CEE-EEEES-SSE-EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEcCC--EEE-EEEEe-CCC-cEEEECCEEEEeeCCcc
Confidence 3445566778999999999999988764 332 55543 222 35799999999999743
No 242
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.76 E-value=0.00017 Score=70.64 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 4679999999999999999999999999999864
No 243
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.74 E-value=0.00032 Score=69.23 Aligned_cols=49 Identities=16% Similarity=0.284 Sum_probs=40.5
Q ss_pred cCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCC
Q 013476 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~ 295 (442)
.|+++++++.++++..++ + ++++|.+.+..+|+...+.+|.||+|+|.-
T Consensus 404 ~gV~v~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDG-S-KVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp TTEEEECSEEEEEEEECS-S-SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CCcEEEeCCEEEEEEcCC-C-cEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 589999999999998765 4 888898876445666689999999999964
No 244
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.73 E-value=2.8e-05 Score=79.36 Aligned_cols=36 Identities=31% Similarity=0.536 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
..+||||||||++|+++|+.|+++|++|+|||+.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 407 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999863
No 245
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.73 E-value=2.4e-05 Score=75.34 Aligned_cols=61 Identities=13% Similarity=0.007 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhh
Q 013476 234 LNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKL 302 (442)
Q Consensus 234 l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~ 302 (442)
+...+.+.+++.|++++++++|+++..+ . +++++ .+++..++.+|.||+|+|......+..
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~----~---v~~~~-~~~~g~~i~~D~vv~a~G~~~~~~l~~ 262 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD----K---VIYED-LNGNTHEVPAKFTMFMPSFQGPEVVAS 262 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS----E---EEEEC-TTSCEEEEECSEEEEECEEECCHHHHT
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC----e---EEEEe-cCCCceEEeeeEEEECCCCccchhHhh
Confidence 5567778888999999999999998532 3 34443 234456899999999999765444443
No 246
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.72 E-value=0.00046 Score=63.75 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=40.6
Q ss_pred HHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 243 ~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
++.|+++++++++.++..++++-++.+|.+.+..+|+...+.+|.||+|+|...
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred hCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCcc
Confidence 357899999999999987653114667787653356557899999999999754
No 247
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.69 E-value=0.0008 Score=66.33 Aligned_cols=32 Identities=28% Similarity=0.207 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-.|+|||+|..|+-.|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999874
No 248
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.68 E-value=0.00028 Score=69.17 Aligned_cols=62 Identities=16% Similarity=0.127 Sum_probs=45.7
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
.+.+.++++|++++++++|+++..++ + ++ .|++ .+|+ .+.||.||+|+|...+ .+++.+|+.
T Consensus 231 ~~~~~l~~~GV~v~~~~~V~~i~~~~-~-~~-~v~l---~dG~--~i~aD~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 231 WTMEKVRREGVKVMPNAIVQSVGVSS-G-KL-LIKL---KDGR--KVETDHIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHHHTTTCEEECSCCEEEEEEET-T-EE-EEEE---TTSC--EEEESEEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEecC-C-eE-EEEE---CCCC--EEECCEEEECCCCCccHHHHHHcCCc
Confidence 44556677899999999999998765 3 44 4554 3443 7999999999998654 467767665
No 249
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.66 E-value=0.0004 Score=63.49 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=42.2
Q ss_pred HHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 243 ~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
++.|+++++++++.++..++ + ++.+|+++. .+|+...+.+|.||+|+|.-.
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~-~-~~~~v~~~~-~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDK-M-GVAGVKVKL-KDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp HCTTEEEECSCEEEEEEEET-T-EEEEEEEEC-TTSCEEEECCSCEEECSCEEE
T ss_pred hcCCeEEEeCcEEEEEEcCC-C-cEEEEEEEc-CCCCeEEeecCeEEEEEcCCC
Confidence 35789999999999998876 5 888898873 466666899999999999744
No 250
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.64 E-value=3.7e-05 Score=73.48 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=32.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~~ 104 (442)
..+||||||||++|+++|+.|++.|. +|+|||+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 45899999999999999999999998 499999975
No 251
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.63 E-value=0.00035 Score=70.12 Aligned_cols=61 Identities=18% Similarity=0.079 Sum_probs=44.1
Q ss_pred HHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 236 VGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 236 ~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
..+.+.+++.|++++++++|+++..+++ . |++ .+|+ .+.+|.||+|+|...+ .+++.+|+.
T Consensus 232 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---v~~---~~g~--~i~~D~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 232 AYVHEHMKNHDVELVFEDGVDALEENGA--V---VRL---KSGS--VIQTDMLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEGGGT--E---EEE---TTSC--EEECSEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHHcCCEEEECCeEEEEecCCC--E---EEE---CCCC--EEEcCEEEEccCCCCChHHHHhcCce
Confidence 3445566778999999999999977652 3 344 3443 7899999999998653 466666654
No 252
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.62 E-value=0.00025 Score=66.64 Aligned_cols=33 Identities=33% Similarity=0.523 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 579999999999999999999999999999864
No 253
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.61 E-value=0.00056 Score=62.99 Aligned_cols=62 Identities=11% Similarity=-0.046 Sum_probs=45.8
Q ss_pred HHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh-HHHhhhhCCC
Q 013476 242 AALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC-DSVRKLADQN 306 (442)
Q Consensus 242 ~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s-~~l~~~~g~~ 306 (442)
+++.|++++.++++.++..++ .+.+|++.+..+++...+.+|.||+|+|... ..+++.+++.
T Consensus 199 l~~~gv~~~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~ 261 (332)
T 3lzw_A 199 LHASKVNVLTPFVPAELIGED---KIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLD 261 (332)
T ss_dssp HHHSSCEEETTEEEEEEECSS---SCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCC
T ss_pred HhcCCeEEEeCceeeEEecCC---ceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCcc
Confidence 356799999999999998765 3456777764456667899999999999754 2455555443
No 254
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.60 E-value=3.7e-05 Score=74.51 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHH-C------CCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAAT-R------GLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~-~------G~~V~liEk~~ 104 (442)
..+||+|||||++|+.+|..|++ . |.+|+|||+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 35799999999999999999999 7 99999999985
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.56 E-value=0.0015 Score=65.56 Aligned_cols=32 Identities=28% Similarity=0.158 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999975
No 256
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.54 E-value=4.5e-05 Score=74.78 Aligned_cols=36 Identities=31% Similarity=0.518 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
+..+||||||||++|+++|..|.++ |.+|+|||+.+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4458999999999999999999887 89999999985
No 257
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.54 E-value=5.8e-05 Score=80.60 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=46.0
Q ss_pred HHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEEC---CC-------CceEEEEcCEEEEccCCC--hHHHhhh-hCCC
Q 013476 240 LTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNN---LS-------GKEFDTYAKVVVNAAGPF--CDSVRKL-ADQN 306 (442)
Q Consensus 240 ~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~---~~-------g~~~~i~a~~VVlAtG~~--s~~l~~~-~g~~ 306 (442)
+.+++.|++|++++.+.++..++ + +|++|++... .+ |+...+.||.||+|+|.- ...|+.. .|+.
T Consensus 378 ~~~~~~Gv~~~~~~~~~~i~~~~-g-~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~ 455 (1025)
T 1gte_A 378 ELAKEEKCEFLPFLSPRKVIVKG-G-RIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIK 455 (1025)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET-T-EEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSC
T ss_pred HHHHHcCCEEEeCCCceEEEccC-C-eEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCce
Confidence 45677899999999999998754 6 8888876421 12 223578999999999983 3456554 2443
No 258
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.52 E-value=0.0005 Score=66.47 Aligned_cols=34 Identities=29% Similarity=0.512 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-+|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 3589999999999999999999999999999864
No 259
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.52 E-value=0.0011 Score=65.33 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..-.++|||||..|+-.|..+++.|.+|+|+++.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 3467999999999999999999999999999874
No 260
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.50 E-value=8.1e-05 Score=72.19 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=32.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC--CeEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRG--LRVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G--~~V~liEk~~~ 105 (442)
..+||+|||+|++|+.+|..|++.| ++|+|||+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 3489999999999999999999998 99999999863
No 261
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.48 E-value=0.00038 Score=64.41 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=38.1
Q ss_pred HcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 244 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 244 ~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
+.|++++++++++++..++ ++.+|.+.+..+|+...+.+|.||+|+|.-.
T Consensus 203 ~~gV~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 203 NDKIRFLTNHTVVAVDGDT---TVTGLRVRDTNTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp CTTEEEECSEEEEEEECSS---SCCEEEEEEETTSCCEEECCSCEEECSCEEE
T ss_pred cCCcEEEeCceeEEEecCC---cEeEEEEEEcCCCceEEeecCEEEEccCCcc
Confidence 5789999999999997654 4556777642345556899999999999754
No 262
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.47 E-value=0.0013 Score=63.57 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=39.4
Q ss_pred cCceEecCeEEEEEEEcC-CCCeEEEEEEEECC------------CCceEEEEcCEEEEccCCChHH
Q 013476 245 AGAAVLNHAEVISLIKDE-ASNRIIGARIRNNL------------SGKEFDTYAKVVVNAAGPFCDS 298 (442)
Q Consensus 245 ~Gv~i~~~~~v~~l~~~~-~g~~v~gV~~~~~~------------~g~~~~i~a~~VVlAtG~~s~~ 298 (442)
+|++|++++.+++|..++ ++ +|.+|++.... +|+...+.||.||+|+|...+.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~-~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGR-RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSS-SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCc-eEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC
Confidence 899999999999998763 22 57777765311 3444689999999999987654
No 263
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.42 E-value=0.00049 Score=67.46 Aligned_cols=61 Identities=15% Similarity=0.049 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCc--eEEEEcCEEEEccCCChHHH
Q 013476 233 RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGK--EFDTYAKVVVNAAGPFCDSV 299 (442)
Q Consensus 233 ~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~--~~~i~a~~VVlAtG~~s~~l 299 (442)
.+...+.+.++++||+++++++|+++..+ + .+..+.. .+|+ ..+|.||.||.|+|.-.+.+
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~~~--~-~~~~~~~---~dg~~~~~~i~ad~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVEEK--Q-LLAKTKH---EDGKITEETIPYGTLIWATGNKARPV 335 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEECSS--E-EEEEEEC---TTSCEEEEEEECSEEEECCCEECCHH
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEeCC--c-eEEEEEe---cCcccceeeeccCEEEEccCCcCCHH
Confidence 44556677788899999999999988542 2 2222221 3343 34799999999999755433
No 264
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.38 E-value=0.00024 Score=68.70 Aligned_cols=33 Identities=30% Similarity=0.474 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
-+|+|||+|..|+-+|..|.+.|. +|+++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 479999999999999999999998 599998864
No 265
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.38 E-value=6.1e-05 Score=76.08 Aligned_cols=33 Identities=24% Similarity=0.470 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCC--------CeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRG--------LRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G--------~~V~liEk~~ 104 (442)
.+|+|||||++||++|+.|++.| ++|+|+|+.+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 68999999999999999999998 9999999985
No 266
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.36 E-value=0.00017 Score=71.95 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCC-CCeEEEEEEEECCCCceEEEEcCEEEEccC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEA-SNRIIGARIRNNLSGKEFDTYAKVVVNAAG 293 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~-g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG 293 (442)
..+.++|.+.++..|++|+++++|.+|..+++ | +++||+. .+|+ .+.||.||....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g-~v~gV~~---~~Ge--~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR-KCKAVID---QFGQ--RIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC-CEEEEEE---TTSC--EEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC-eEEEEEe---CCCC--EEEcCEEEEChh
Confidence 68899999999999999999999999988764 6 8999874 3454 789999888444
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.34 E-value=0.00094 Score=64.26 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|+|||+|..|+-.|..+++.|.+|+|+|+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 3579999999999999999999999999999864
No 268
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.32 E-value=0.0019 Score=68.97 Aligned_cols=33 Identities=36% Similarity=0.418 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
-.|+|||||..|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999997 899999864
No 269
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.25 E-value=0.0015 Score=63.06 Aligned_cols=61 Identities=15% Similarity=-0.008 Sum_probs=43.5
Q ss_pred HHHHHHHHHH------cCceEecCeEEEEEEEcCCCCeEEEEEEEEC-------------CCCceEEEEcCEEEEccCCC
Q 013476 235 NVGLALTAAL------AGAAVLNHAEVISLIKDEASNRIIGARIRNN-------------LSGKEFDTYAKVVVNAAGPF 295 (442)
Q Consensus 235 ~~~l~~~~~~------~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~-------------~~g~~~~i~a~~VVlAtG~~ 295 (442)
...|.+.+++ +|++|++++.+.++..+ + +|.+|++... .+|+...+.||.||.|+|..
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~-~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--R-KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--S-SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--C-cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc
Confidence 3455555655 79999999999999765 3 6666766520 13444579999999999986
Q ss_pred hHH
Q 013476 296 CDS 298 (442)
Q Consensus 296 s~~ 298 (442)
.+.
T Consensus 326 p~~ 328 (456)
T 1lqt_A 326 GVP 328 (456)
T ss_dssp CCC
T ss_pred cCC
Confidence 644
No 270
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.25 E-value=0.0017 Score=63.06 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-.|..|++.|.+|+|+++.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 3579999999999999999999999999999864
No 271
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=97.23 E-value=0.00011 Score=42.18 Aligned_cols=18 Identities=39% Similarity=0.350 Sum_probs=13.8
Q ss_pred CcchhhhhhhHHHHhhhc
Q 013476 1 MSATRIRRFGAVLAAAAG 18 (442)
Q Consensus 1 ~srR~f~~~~~~~~~~aa 18 (442)
||||+|||+.++++++++
T Consensus 3 lsRR~FLK~~aaa~Aaaa 20 (35)
T 2pq4_B 3 LSRRSFMKANAVAAAAAA 20 (35)
T ss_dssp CCSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 689999998876665544
No 272
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.21 E-value=0.00018 Score=70.50 Aligned_cols=35 Identities=14% Similarity=0.322 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.+..|||||||.+|+++|..|++.+++|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 34689999999999999999999999999999974
No 273
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.20 E-value=0.0047 Score=56.24 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+|+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 579999999999999999999999999999753
No 274
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.04 E-value=0.00041 Score=65.99 Aligned_cols=57 Identities=11% Similarity=-0.037 Sum_probs=42.3
Q ss_pred HHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhhCCC
Q 013476 242 AALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (442)
Q Consensus 242 ~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~g~~ 306 (442)
+++.|++++.++++..+..++++ .. |+. .+|+ .+.+|.||+|+|--.+.+++..|+.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~-~~--v~~---~~g~--~i~~D~vi~~~g~~~~~~~~~~gl~ 268 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEA-MT--VET---SFGE--TFKAAVINLIPPQRAGKIAQSASLT 268 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTT-TE--EEE---TTSC--EEECSEEEECCCEEECHHHHHTTCC
T ss_pred HHhcCcEEEeCceEEEEEecccc-eE--EEc---CCCc--EEEeeEEEEecCcCCchhHhhcccc
Confidence 45679999999999998877644 21 333 3443 7999999999998777777776653
No 275
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.02 E-value=0.0023 Score=67.91 Aligned_cols=60 Identities=17% Similarity=0.121 Sum_probs=42.4
Q ss_pred HHcCceEecCeEEEEEEEcCCCCeEEEEEEEE--CC--CCceEEEEcCEEEEccCCChH-HHhhhh
Q 013476 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRN--NL--SGKEFDTYAKVVVNAAGPFCD-SVRKLA 303 (442)
Q Consensus 243 ~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~--~~--~g~~~~i~a~~VVlAtG~~s~-~l~~~~ 303 (442)
++.|++|++++.++++..++++ ++.+|++.+ .. +|+...+.+|.||+|+|.-.+ .++...
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~-~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~ 391 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENG-ELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR 391 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTS-CEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT
T ss_pred HhCCeEEEeCCEeEEEeccCCC-CEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC
Confidence 4579999999999999875224 788888863 10 133468999999999997432 344443
No 276
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.97 E-value=0.0042 Score=58.04 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 479999999999999999999999999999863
No 277
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.81 E-value=0.002 Score=63.76 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.+.+|+|+++.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 579999999999999999999999999999985
No 278
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.58 E-value=0.0031 Score=49.97 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=33.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 68 ~~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...+-.|+|||.|-.|...|..|.+.|++|+++|+.+
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3445689999999999999999999999999999963
No 279
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.34 E-value=0.012 Score=60.52 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=30.5
Q ss_pred CcEEEEC--CChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIG--GGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVG--aG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+||| +|..|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799999 99999999999999999999999853
No 280
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.11 E-value=0.0076 Score=48.64 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|+|||+|..|...|..|.+.|.+|+++|+..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 281
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.97 E-value=0.0085 Score=47.41 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|+|+|..|...|..|.++|++|+++|+.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 47999999999999999999999999999986
No 282
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.95 E-value=0.0088 Score=47.03 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|||+|..|...|..|.+.|++|+++|+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999999999985
No 283
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.94 E-value=0.011 Score=47.62 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.-.|+|+|+|..|...|..|.+.|++|+++|+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999985
No 284
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.83 E-value=0.0092 Score=45.31 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-CeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRG-LRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G-~~V~liEk~ 103 (442)
..|+|+|+|..|..++..|.+.| ++|+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 46999999999999999999999 899999985
No 285
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.61 E-value=0.009 Score=56.27 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILE 179 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 579999999999999999999999999999975
No 286
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.56 E-value=0.0088 Score=54.43 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 479999999999999999999999999999874
No 287
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.50 E-value=0.062 Score=54.61 Aligned_cols=51 Identities=14% Similarity=-0.029 Sum_probs=37.5
Q ss_pred HHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 237 ~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
.+.+.+++.|++++.+++++++.. + . +++.. +|+...+.+|.||+|+|.-.
T Consensus 578 ~~~~~l~~~GV~v~~~~~v~~i~~--~--~---v~~~~--~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 578 IHRTTLLSRGVKMIPGVSYQKIDD--D--G---LHVVI--NGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEET--T--E---EEEEE--TTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhcCCEEEeCcEEEEEeC--C--e---EEEec--CCeEEEEeCCEEEECCCccc
Confidence 445667789999999999999862 2 3 23322 45456899999999999754
No 288
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.39 E-value=0.015 Score=52.86 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|.|||+|..|...|..++..|++|+|+|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 569999999999999999999999999999863
No 289
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.29 E-value=0.058 Score=53.86 Aligned_cols=36 Identities=28% Similarity=0.463 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~~ 105 (442)
++|||+|||+|+.|+..|..|++.|++|++|||+..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~ 42 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSY 42 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCc
Confidence 469999999999999999999999999999999973
No 290
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.20 E-value=0.023 Score=51.53 Aligned_cols=32 Identities=44% Similarity=0.641 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|+++|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 35999999999999999999999999999986
No 291
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.16 E-value=0.02 Score=45.18 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|+|+|..|...|..|.+.|++|+++|+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 292
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.07 E-value=0.026 Score=46.79 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHC-CCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATR-GLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~-G~~V~liEk~~ 104 (442)
.-.|+|||+|..|...|..|.+. |++|+++|+..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999863
No 293
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.89 E-value=0.024 Score=53.87 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
....|.|||.|.+||.+|..||+.|++|+.+|-.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 4478999999999999999999999999999876
No 294
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.88 E-value=0.074 Score=48.03 Aligned_cols=33 Identities=3% Similarity=-0.018 Sum_probs=25.7
Q ss_pred CCcEEEECCCh-HHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGA-TGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~-aGl~aA~~La~~G~~V~liEk~ 103 (442)
...++|||+|. +++.+|..+.+.|.+|+|+++.
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~ 179 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNG 179 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSS
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEecc
Confidence 45688888775 5678888888889999998764
No 295
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.85 E-value=0.026 Score=51.47 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|...|..|+++|++|+++|+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 569999999999999999999999999999863
No 296
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.78 E-value=0.034 Score=49.86 Aligned_cols=32 Identities=25% Similarity=0.465 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|+++|+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46999999999999999999999999999986
No 297
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.64 E-value=0.033 Score=50.89 Aligned_cols=32 Identities=44% Similarity=0.510 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|||+|..|...|..|++.|.+|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46999999999999999999999999999885
No 298
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.51 E-value=0.021 Score=54.52 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|...|..|++.|++|+++|+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 469999999999999999999999999999864
No 299
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.50 E-value=0.03 Score=47.90 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.-.|+|||||-+|...|..|.+.|++|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 467999999999999999999999999999874
No 300
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.48 E-value=0.033 Score=50.68 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|.+.|..|++.|.+|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 46999999999999999999999999999885
No 301
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.41 E-value=0.022 Score=50.36 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.-.|+|||+|-.|...|..|.+.|++|+|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999999999999999999999975
No 302
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.37 E-value=0.044 Score=50.43 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|.+.|..|++.|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999874
No 303
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.32 E-value=0.038 Score=47.32 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.|+|||+|..|...|..|.++|++|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 48999999999999999999999999999863
No 304
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.25 E-value=0.047 Score=52.19 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
....+.|||.|..|+..|..|++.|++|+++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999874
No 305
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.25 E-value=0.043 Score=53.06 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|.|||+|..|+..|..|++.|++|+++|+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 467999999999999999999999999999985
No 306
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.23 E-value=0.047 Score=50.08 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
...|+|||+|..|.+.|..|++.|+ +|+|+|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3579999999999999999999998 999999864
No 307
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.13 E-value=0.051 Score=50.38 Aligned_cols=34 Identities=32% Similarity=0.421 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
....|.|||+|..|.+.|..|+++|++|+++++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3457999999999999999999999999999985
No 308
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.00 E-value=0.061 Score=45.69 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.|.+|+++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 569999999999999999999999999999864
No 309
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.96 E-value=0.057 Score=49.24 Aligned_cols=32 Identities=38% Similarity=0.597 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
..|+|||+|..|...|..|++.|. +|+++|+.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 479999999999999999999999 99999986
No 310
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.91 E-value=0.056 Score=51.81 Aligned_cols=33 Identities=33% Similarity=0.361 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|+..|..|++.|++|+++|+..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 369999999999999999999999999999863
No 311
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.89 E-value=0.067 Score=50.04 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|+|||+|.+|+.+|..|...|++|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 312
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.86 E-value=0.06 Score=51.84 Aligned_cols=33 Identities=27% Similarity=0.210 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHC-CC-eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATR-GL-RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~-G~-~V~liEk~~ 104 (442)
..|.|||+|..|+..|..|++. |+ +|+++|+..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4799999999999999999999 99 999999874
No 313
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.77 E-value=0.065 Score=48.00 Aligned_cols=32 Identities=28% Similarity=0.177 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.|.|||+|..|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 48999999999999999999999999999864
No 314
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.76 E-value=0.065 Score=49.27 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.++..|.|||+|..|...|..|++.|++|+++++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45688999999999999999999999999999885
No 315
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.74 E-value=0.045 Score=49.35 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|||+|..|.+.|..|++.|.+|+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 46999999999999999999999999999986
No 316
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.63 E-value=0.074 Score=51.13 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|.|||.|.+|+++|..|+++|++|++.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 579999999999999999999999999999853
No 317
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.61 E-value=0.072 Score=51.36 Aligned_cols=33 Identities=33% Similarity=0.473 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|...|..|++.|++|+++|+..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 318
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.57 E-value=0.07 Score=48.41 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 36999999999999999999999999999885
No 319
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.56 E-value=0.062 Score=47.05 Aligned_cols=34 Identities=24% Similarity=0.529 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
..|+|||+|-.|..+|..|++.|. +++|+|...+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 689999999999999999999997 7999999754
No 320
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.53 E-value=0.07 Score=47.83 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=30.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..-.|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3467999999999999999999 999999999863
No 321
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.51 E-value=0.086 Score=48.23 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
..|+|||+|..|.+.|..|++.|+ +|+|+|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999863
No 322
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.40 E-value=0.064 Score=51.80 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+++..
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 579999999999999999999999999999864
No 323
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.39 E-value=0.072 Score=51.50 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNT 209 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC
Confidence 4589999999999999999999999999999975
No 324
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.35 E-value=0.074 Score=49.32 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|+|||+|.+|+.+|..|...|++|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3679999999999999999999999999999863
No 325
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.33 E-value=0.096 Score=47.52 Aligned_cols=34 Identities=18% Similarity=0.358 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|.|||.|..|...|..|++.|++|+++++..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999863
No 326
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.33 E-value=0.078 Score=49.08 Aligned_cols=35 Identities=26% Similarity=0.517 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
.+..|||+|||.+|+.+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34789999999999999999999999 899999974
No 327
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.30 E-value=0.076 Score=50.32 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=30.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
....|.|||+|..|+..|..|++ |++|+++|+..
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 33579999999999999999998 99999999863
No 328
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.30 E-value=0.1 Score=47.26 Aligned_cols=34 Identities=35% Similarity=0.404 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
....|.|||+|..|.+.|+.|++.|+ +|+|+|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34579999999999999999999999 99999986
No 329
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.29 E-value=0.066 Score=51.31 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||.|.+|+++|..|+++|++|++.|...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 469999999999999999999999999999875
No 330
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.19 E-value=0.09 Score=47.55 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
.|+|||+|..|.+.|+.|+..|+ +|+|+|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 48999999999999999999999 99999876
No 331
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.17 E-value=0.091 Score=48.72 Aligned_cols=32 Identities=25% Similarity=0.205 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999885
No 332
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.15 E-value=0.11 Score=45.39 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=30.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
....|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999999999999999999999999999986
No 333
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.15 E-value=0.09 Score=47.65 Aligned_cols=31 Identities=35% Similarity=0.393 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|||+|..|...|..|+ .|.+|+++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 46999999999999999999 99999999885
No 334
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.13 E-value=0.076 Score=50.79 Aligned_cols=31 Identities=29% Similarity=0.217 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.|.|||+|..|+..|..|++.|++|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999985
No 335
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.09 E-value=0.099 Score=47.25 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 357999999999999999999999999999886
No 336
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.09 E-value=0.091 Score=49.86 Aligned_cols=34 Identities=32% Similarity=0.404 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+++|+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~ 185 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP 185 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC
Confidence 4679999999999999999999999999999975
No 337
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.09 E-value=0.094 Score=47.75 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.|+ +|+|+|...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 469999999999999999999998 999999863
No 338
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.06 E-value=0.1 Score=49.30 Aligned_cols=34 Identities=12% Similarity=0.252 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
+-.|+|||.|-.|...|..|.+.|.+|++||+..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999873
No 339
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.05 E-value=0.068 Score=52.69 Aligned_cols=34 Identities=26% Similarity=0.232 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 3579999999999999999999999999999985
No 340
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.99 E-value=0.099 Score=47.63 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|.+.|..|++.|.+|+++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 56999999999999999999999999999 64
No 341
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.98 E-value=0.1 Score=46.29 Aligned_cols=33 Identities=33% Similarity=0.471 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|+|+|+|.+|.++|..|++.|.+|+|+++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 356999999999999999999999999999875
No 342
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.96 E-value=0.075 Score=51.73 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-.|..|++.|.+|+|+|+.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 4579999999999999999999999999999875
No 343
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.91 E-value=0.099 Score=48.33 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
-.+..|||+|+|.+|..+|..|...|. +|+++|+..
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 356789999999999999999999998 799999973
No 344
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.91 E-value=0.11 Score=50.22 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|...|..|++.|++|+++|+..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 345
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.84 E-value=0.073 Score=51.13 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCe-EEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLR-VGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~-V~liEk~~ 104 (442)
.-+|+|||+|..|+-.|..|++.|.+ |+|+++..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 35799999999999999999999999 99999864
No 346
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=92.84 E-value=0.05 Score=52.02 Aligned_cols=35 Identities=17% Similarity=0.141 Sum_probs=25.4
Q ss_pred CCCCcEEEECCChHHH-HHHHHHHHC-CCe-EEEEecc
Q 013476 69 SNPLDILVIGGGATGC-GVALDAATR-GLR-VGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl-~aA~~La~~-G~~-V~liEk~ 103 (442)
++...|.|||+|..|. ..+..|.+. +.+ |.|+++.
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~ 118 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN 118 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC
Confidence 4457899999999996 666666664 566 4577765
No 347
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.84 E-value=0.097 Score=50.73 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-.|..|++.|.+|+|+++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 3579999999999999999999999999999874
No 348
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.77 E-value=0.043 Score=43.43 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|+|||+|..|...|..|++.|.+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 367999999999999999999999999999885
No 349
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.76 E-value=0.11 Score=48.18 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|+|+|.+|..++..|...|++|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999885
No 350
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.72 E-value=0.08 Score=52.29 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 579999999999999999999999999999975
No 351
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.67 E-value=0.11 Score=48.98 Aligned_cols=34 Identities=26% Similarity=0.420 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|+|||+|.+|+.+|..|...|++|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999863
No 352
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.67 E-value=0.15 Score=46.55 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
..|+|||+|..|...|..|+..|+ +|+|+|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999763
No 353
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.62 E-value=0.1 Score=49.47 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
....|||.|..|+..|..|++.|++|+++|+..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 568999999999999999999999999999873
No 354
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.59 E-value=0.12 Score=46.27 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.|.|||.|..|...|..|++.|++|+++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 58999999999999999999999999999864
No 355
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.54 E-value=0.15 Score=46.42 Aligned_cols=36 Identities=28% Similarity=0.298 Sum_probs=31.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
+....|.|||+|..|.+.|+.|+..|+ +|+|+|...
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 334679999999999999999999999 999999864
No 356
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.48 E-value=0.15 Score=43.36 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999885
No 357
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.45 E-value=0.12 Score=50.22 Aligned_cols=34 Identities=24% Similarity=0.180 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-.|..|++.|.+|+|+++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 3479999999999999999999999999999864
No 358
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.40 E-value=0.17 Score=45.78 Aligned_cols=33 Identities=36% Similarity=0.452 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999886
No 359
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.38 E-value=0.1 Score=46.98 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||.|..|...|..|++.|++|+++++..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999874
No 360
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.38 E-value=0.086 Score=49.11 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999999999885
No 361
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.33 E-value=0.15 Score=49.45 Aligned_cols=36 Identities=28% Similarity=0.346 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.+...|.|||.|..|...|..|+++|++|+++++..
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456889999999999999999999999999999864
No 362
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.32 E-value=0.14 Score=47.75 Aligned_cols=32 Identities=25% Similarity=0.495 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|+|+|..|..+|..|...|++|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 56999999999999999999999999999985
No 363
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.24 E-value=0.15 Score=46.25 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
.|+|||+|..|.+.|..|++. |.+|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 489999999999999999995 78999999864
No 364
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.24 E-value=0.11 Score=50.54 Aligned_cols=34 Identities=32% Similarity=0.342 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATR---GLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~---G~~V~liEk~~ 104 (442)
.-.++|||+|..|+-.|..|++. |.+|+|+|+.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 223 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC
Confidence 35899999999999999999999 99999999975
No 365
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.22 E-value=0.11 Score=47.59 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVER 102 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk 102 (442)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 366
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.17 E-value=0.15 Score=46.67 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHH-HHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCG-VALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~-aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||.|.+|++ +|..|.++|++|.+.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46999999999996 8899999999999999864
No 367
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.16 E-value=0.15 Score=47.84 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999863
No 368
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.14 E-value=0.17 Score=44.65 Aligned_cols=34 Identities=24% Similarity=0.508 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...++|||+|-+|.++|+.|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999998863
No 369
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.13 E-value=0.13 Score=46.19 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|.++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999885
No 370
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.11 E-value=0.13 Score=50.39 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-.|..|++.|.+|+|+|+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC
Confidence 689999999999999999999999999999975
No 371
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.11 E-value=0.15 Score=46.41 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 47999999999999999999999999999986
No 372
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.06 E-value=0.17 Score=45.76 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
..|+|||+|..|...|+.|+..|. +|+|+|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999753
No 373
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.91 E-value=0.13 Score=45.87 Aligned_cols=36 Identities=17% Similarity=0.329 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
....|+|||+|-.|..+|..|++.|. +++|+|...+
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 35789999999999999999999997 7999998754
No 374
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.84 E-value=0.078 Score=51.02 Aligned_cols=32 Identities=19% Similarity=0.475 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.|+|+|+|-.|...|..|.++|++|+|||+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999999999999999873
No 375
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.83 E-value=0.12 Score=46.25 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.|.|||.|..|...|..|++.|++|+++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 59999999999999999999999999999864
No 376
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.82 E-value=0.12 Score=48.90 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.|.|||+|..|+..|..|++ |++|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 48999999999999999999 9999999985
No 377
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.81 E-value=0.17 Score=42.80 Aligned_cols=31 Identities=32% Similarity=0.487 Sum_probs=28.8
Q ss_pred cEEEEC-CChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIG-GGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVG-aG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.|+||| +|..|...|..|++.|++|+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999999999875
No 378
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.81 E-value=0.17 Score=46.03 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-CeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRG-LRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G-~~V~liEk~~ 104 (442)
..|.|||.|..|...|..|++.| ++|+++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999863
No 379
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.80 E-value=0.22 Score=45.32 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
....|.|||+|..|.+.|+.|+..|. +|.|+|...
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 34679999999999999999999988 999999864
No 380
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.79 E-value=0.18 Score=46.66 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999986
No 381
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.79 E-value=0.14 Score=49.41 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=31.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
+.+.+|.|||.|..|...|..|+++|++|+++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 44578999999999999999999999999999886
No 382
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.76 E-value=0.27 Score=44.78 Aligned_cols=35 Identities=23% Similarity=0.543 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
...|+|||+|-.|..+|..|++.|. +++|+|...+
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 4789999999999999999999997 6999998764
No 383
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.74 E-value=0.21 Score=45.36 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|...|..|++.|++|+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 569999999999999999999999999998863
No 384
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.73 E-value=0.13 Score=45.58 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|+|+|+|.+|.++|..|++.|.+|+|+.+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 356999999999999999999999999999885
No 385
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.71 E-value=0.18 Score=43.41 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=30.5
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGa-G~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|.|| |..|..++.+|+++|++|+++.+..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 356999997 9999999999999999999998863
No 386
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.69 E-value=0.15 Score=46.51 Aligned_cols=31 Identities=23% Similarity=0.465 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
.|.|||+|..|.+.|..|++.|+ +|+++|+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48999999999999999999999 99999986
No 387
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.66 E-value=0.099 Score=44.77 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEE-Eecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGL-VERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~l-iEk~ 103 (442)
..|.|||+|..|.+.|..|++.|++|++ +++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 5799999999999999999999999998 7764
No 388
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.64 E-value=0.11 Score=47.16 Aligned_cols=31 Identities=35% Similarity=0.454 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHC-----C-CeEEEEec
Q 013476 72 LDILVIGGGATGCGVALDAATR-----G-LRVGLVER 102 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~-----G-~~V~liEk 102 (442)
-.|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3699999999999999999999 9 99999987
No 389
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.64 E-value=0.16 Score=45.74 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46999999999999999999999999999886
No 390
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.62 E-value=0.19 Score=47.00 Aligned_cols=33 Identities=33% Similarity=0.535 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|+|||+|.+|..+|..|...|++|+++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 357999999999999999999999999999985
No 391
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.61 E-value=0.18 Score=48.29 Aligned_cols=32 Identities=31% Similarity=0.328 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
--|+|+|+|..|..+|..|+..|++|+++|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999999999999999999875
No 392
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.60 E-value=0.22 Score=45.33 Aligned_cols=34 Identities=24% Similarity=0.354 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~~ 104 (442)
...|+|||+|..|.++|+.|+..|. +|+|+|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999988 899999863
No 393
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=91.55 E-value=0.19 Score=45.40 Aligned_cols=34 Identities=24% Similarity=0.141 Sum_probs=30.4
Q ss_pred CCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG-~aGl~aA~~La~~G~~V~liEk~ 103 (442)
....|+|||+| ++|..+|..|.+.|++|+++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 45689999999 67999999999999999999775
No 394
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.48 E-value=0.2 Score=48.26 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..+|.|||.|..|...|..|++.|++|+++++..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 395
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.47 E-value=0.18 Score=48.95 Aligned_cols=33 Identities=24% Similarity=0.169 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.++|||+|..|+-.|..|++.|.+|+|+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 579999999999999999999999999999853
No 396
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.44 E-value=0.17 Score=49.06 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~ 103 (442)
..|.|||.|..|+..|..|++. |++|+++|+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999999999999999998 7999999975
No 397
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.39 E-value=0.22 Score=43.60 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
...|+|||+|-.|..+|..|++.|. +++|+|...+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4789999999999999999999998 6999998754
No 398
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.38 E-value=0.19 Score=45.28 Aligned_cols=33 Identities=27% Similarity=0.479 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
...|+|||+|.+|.++|..|++.|. +|+|+.+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4579999999999999999999998 89999875
No 399
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.32 E-value=0.25 Score=44.78 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
...|.|||.|..|.+.|..|++.|+ +|+++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 3579999999999999999999999 99999886
No 400
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.27 E-value=0.19 Score=48.94 Aligned_cols=59 Identities=12% Similarity=0.045 Sum_probs=45.7
Q ss_pred HHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChH-HHhhhhCCC
Q 013476 240 LTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (442)
Q Consensus 240 ~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~-~l~~~~g~~ 306 (442)
+.++++|++|++++.++++..++ ++.+|+. .+| ..+.||.||+|+|...+ .|++.+|+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~---~v~~v~~---~~g--~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE---KVERVID---MNN--HEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS---SCCEEEE---TTC--CEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCcEEEeCCeeEEEecCC---ceEEEEe---CCC--eEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 66778999999999999997653 4555554 344 47999999999998765 488887765
No 401
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.26 E-value=0.21 Score=50.95 Aligned_cols=33 Identities=30% Similarity=0.456 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|...|..|++.|++|+++|+..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999999863
No 402
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.25 E-value=0.19 Score=48.27 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-.|+|||+|-.|...+..|.+.|++|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 56999999999999999999999999999975
No 403
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.18 E-value=0.18 Score=45.75 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRG--LRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G--~~V~liEk~ 103 (442)
.|+|||+|..|.+.|..|++.| .+|+++|+.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 5999999999999999999999 689999985
No 404
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.16 E-value=0.22 Score=45.36 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
...|+|||+|..|.++|+.|++.|. +|+|+|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999987 89999975
No 405
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.06 E-value=0.23 Score=44.12 Aligned_cols=31 Identities=35% Similarity=0.368 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999875
No 406
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.00 E-value=0.2 Score=44.64 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|.|+|..|...+..|.++|++|+++.+..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999998863
No 407
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.96 E-value=0.25 Score=44.64 Aligned_cols=33 Identities=18% Similarity=0.484 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4579999999999999999999998 79999885
No 408
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.93 E-value=0.24 Score=45.83 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
....|+|+|.|..|..+|..|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3467999999999999999999999999998864
No 409
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.90 E-value=0.27 Score=44.26 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=30.2
Q ss_pred CcEEEEC-CChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIG-GGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVG-aG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.||| +|..|.+.|..|++.|++|+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4699999 99999999999999999999998753
No 410
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.88 E-value=0.19 Score=45.20 Aligned_cols=33 Identities=21% Similarity=0.212 Sum_probs=27.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|-+||-|..|...|..|+++|++|+++++..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999874
No 411
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.80 E-value=0.2 Score=45.51 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
..|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 579999999999999999999999 99999985
No 412
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.78 E-value=0.32 Score=43.29 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|+|.|+|..|...+..|.++|++|+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 469999999999999999999999999999874
No 413
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.77 E-value=0.23 Score=48.19 Aligned_cols=34 Identities=32% Similarity=0.539 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.-.|+|||+|..|+-.|..|++.|.+|+++++.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 4589999999999999999999999999999975
No 414
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.73 E-value=0.23 Score=44.79 Aligned_cols=33 Identities=30% Similarity=0.616 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~~ 104 (442)
..|.|||+|.+|...|+.|+..|. .|+|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999998 899999864
No 415
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=90.71 E-value=0.3 Score=43.47 Aligned_cols=35 Identities=11% Similarity=0.015 Sum_probs=30.8
Q ss_pred CCCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG-~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-....|+|||+| ++|..+|..|.+.|++|+++.+.
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 345789999999 68999999999999999999754
No 416
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.69 E-value=0.28 Score=42.92 Aligned_cols=31 Identities=23% Similarity=0.435 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
.++|||+|.+|.++++.|++.|. +|+|++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 79999999999999999999998 89999886
No 417
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.69 E-value=0.27 Score=45.62 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.|+|||||..|..+|+.+.+.|++|+++|..+
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 48999999999999999999999999999874
No 418
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.63 E-value=0.22 Score=43.75 Aligned_cols=31 Identities=26% Similarity=0.524 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHCC-CeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRG-LRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G-~~V~liEk~ 103 (442)
.|.|||+|..|...|..|++.| .+|.++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 4899999999999999999999 999999875
No 419
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.62 E-value=0.22 Score=44.60 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
.|+|||+|..|.+.|+.|++.|. +|+|+|..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 48999999999999999999998 89999986
No 420
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=90.59 E-value=0.24 Score=47.66 Aligned_cols=34 Identities=29% Similarity=0.397 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...++|||+|..|+-.|..|++.|.+|+++++.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 4689999999999999999999999999999975
No 421
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=90.56 E-value=0.27 Score=47.47 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..+|.|||+|..|...|..|++.|++|+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999999999999999999999985
No 422
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.54 E-value=0.28 Score=43.66 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=30.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
....++|+|+|-+|.++++.|++.|. +|+|+.|.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 34679999999999999999999998 69999875
No 423
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.52 E-value=0.26 Score=47.73 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999999863
No 424
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.45 E-value=0.33 Score=44.53 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|.|||.|..|.+.|..|.+.|++|+++++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 425
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.43 E-value=0.25 Score=50.34 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|...|..|++.|++|+++|+..
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 426
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.37 E-value=0.11 Score=44.75 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||.|..|.+.|..|.++|++|+++++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 46999999999999999999999999999873
No 427
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.37 E-value=0.26 Score=47.61 Aligned_cols=31 Identities=35% Similarity=0.677 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
+|.|||+|..|...|..|++.|++|+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6999999999999999999999999999985
No 428
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.36 E-value=0.29 Score=43.49 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
.|.|||+|..|.+.|..|++.|+ +|+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 48999999999999999999998 89999875
No 429
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.36 E-value=0.17 Score=47.19 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-------CeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRG-------LRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G-------~~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.| .+|+++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 36999999999999999999999 9999999864
No 430
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=90.36 E-value=0.2 Score=44.86 Aligned_cols=32 Identities=22% Similarity=0.422 Sum_probs=28.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...++|+|+|.+|.++|..|++.| +|+|+.+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 356999999999999999999999 99999774
No 431
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.33 E-value=0.35 Score=43.03 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC---eEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGL---RVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~---~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.|+ +|+++++..
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 569999999999999999999998 899999864
No 432
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.30 E-value=0.34 Score=40.97 Aligned_cols=30 Identities=33% Similarity=0.535 Sum_probs=28.3
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCeEEEEecc
Q 013476 74 ILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 74 VvVVGa-G~aGl~aA~~La~~G~~V~liEk~ 103 (442)
|+|+|| |..|...+..|+++|++|+++.+.
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 899995 999999999999999999999886
No 433
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.29 E-value=0.22 Score=44.22 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
...++|||+|.+|.++|+.|++.|. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899998863
No 434
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.28 E-value=0.23 Score=50.53 Aligned_cols=33 Identities=33% Similarity=0.473 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|.|||+|..|...|+.++..|++|+|+|..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 479999999999999999999999999999863
No 435
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.25 E-value=0.27 Score=44.05 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
.|.|||+|..|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999998863
No 436
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.25 E-value=0.24 Score=47.74 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~ 103 (442)
..|.|||.|..|+..|..|++. |++|+++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4699999999999999999999 8999999986
No 437
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.22 E-value=0.25 Score=43.84 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|+|||+|.+|.+.|..|.+.|.+|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999885
No 438
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.17 E-value=0.26 Score=44.86 Aligned_cols=32 Identities=31% Similarity=0.400 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
..|.|||+|..|.++|+.|+..|. .|+|+|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 579999999999999999999998 89999975
No 439
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.14 E-value=0.27 Score=43.19 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCC----CeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRG----LRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G----~~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.| .+|.++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 46999999999999999999999 6899999874
No 440
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.09 E-value=0.31 Score=43.52 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=29.9
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGa-G~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+ |..|...|..|++.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 36999999 999999999999999999999875
No 441
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=90.08 E-value=0.3 Score=43.36 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
...++|+|+|-+|.++++.|++.|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4579999999999999999999998 89999875
No 442
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.05 E-value=0.18 Score=47.59 Aligned_cols=29 Identities=28% Similarity=0.416 Sum_probs=27.4
Q ss_pred cEEEECCChHHHHHHHHHHH-CCCeEEEEe
Q 013476 73 DILVIGGGATGCGVALDAAT-RGLRVGLVE 101 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~-~G~~V~liE 101 (442)
.|.|||+|..|.+.|..|++ .|++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 59999999999999999998 599999998
No 443
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.03 E-value=0.19 Score=44.85 Aligned_cols=33 Identities=18% Similarity=0.048 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
...|+|||+|..|+-+|..|++.| +|+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 468999999999999999999999 999998753
No 444
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.03 E-value=0.35 Score=41.06 Aligned_cols=30 Identities=37% Similarity=0.586 Sum_probs=28.4
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCeEEEEecc
Q 013476 74 ILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 74 VvVVGa-G~aGl~aA~~La~~G~~V~liEk~ 103 (442)
|+|.|| |..|...+..|+++|++|+++.+.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 899997 999999999999999999999885
No 445
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.02 E-value=0.16 Score=46.91 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-------CeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRG-------LRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G-------~~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.| ++|+++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 36999999999999999999999 8999999864
No 446
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.01 E-value=0.3 Score=45.02 Aligned_cols=35 Identities=23% Similarity=0.504 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
...|+|||+|..|..+|..|++.|. +++|+|...+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4789999999999999999999998 6999998754
No 447
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.98 E-value=0.34 Score=43.42 Aligned_cols=34 Identities=32% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
....|.|||+|..|..+|..|...|.+|+++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3457999999999999999999999999999985
No 448
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.96 E-value=0.35 Score=42.80 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4579999999999999999999996 89999774
No 449
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.95 E-value=0.34 Score=43.58 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|.|||+|.+|..+|..|...|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 456999999999999999999999999999985
No 450
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=89.93 E-value=0.36 Score=42.65 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG-~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-...+|+|||+| +.|..+|..|.+.|++|+++.+.
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 455789999999 68999999999999999999754
No 451
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.81 E-value=0.32 Score=43.73 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999999885
No 452
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=89.80 E-value=0.31 Score=42.72 Aligned_cols=35 Identities=9% Similarity=0.185 Sum_probs=30.5
Q ss_pred CCCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG-~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-....++|||+| ++|..+|..|.+.|++|+++.+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 445789999976 79999999999999999999763
No 453
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=89.80 E-value=0.44 Score=45.94 Aligned_cols=56 Identities=11% Similarity=-0.095 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHc--------CceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCC
Q 013476 232 SRLNVGLALTAALA--------GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (442)
Q Consensus 232 ~~l~~~l~~~~~~~--------Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~ 295 (442)
..+...|.+.+.+. |++|+++++|++|..+++ +++ |++ .+|+ .+.||.||+|++..
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~--~v~-v~~---~~g~--~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPG--GVT-VKT---EDNS--VYSADYVMVSASLG 269 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSS--CEE-EEE---TTSC--EEEESEEEECSCHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCC--cEE-EEE---CCCC--EEEcCEEEEecCHH
Confidence 35677777766554 789999999999998875 443 443 3443 78999999999964
No 454
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.78 E-value=0.4 Score=43.72 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=30.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
....|.|||+|.+|.+.|+.|+..|. .|+|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34679999999999999999999998 89999975
No 455
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.69 E-value=0.37 Score=43.06 Aligned_cols=33 Identities=27% Similarity=0.271 Sum_probs=29.9
Q ss_pred CCcEEEEC-CChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIG-GGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVG-aG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...++|+| +|.+|.++|..|+++|.+|+++.+.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 35699999 8999999999999999999999875
No 456
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.69 E-value=0.34 Score=44.02 Aligned_cols=35 Identities=17% Similarity=0.416 Sum_probs=30.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
++...|+|||+|..|.+.|+.|+..|. .|.|+|..
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 344689999999999999999999885 79999864
No 457
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.68 E-value=0.31 Score=44.12 Aligned_cols=32 Identities=34% Similarity=0.496 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~~ 104 (442)
.|.|||+|..|.+.|+.|+..|. .|+|+|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 48999999999999999999887 899999864
No 458
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=89.66 E-value=0.35 Score=42.99 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=30.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
....++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 34579999999999999999999996 89999875
No 459
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.63 E-value=0.35 Score=43.96 Aligned_cols=35 Identities=23% Similarity=0.538 Sum_probs=30.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 69 SNPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
.....|+|||+|..|.++|+.|+..|. ++.|+|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 344679999999999999999999987 89999974
No 460
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.60 E-value=0.38 Score=47.30 Aligned_cols=35 Identities=23% Similarity=0.543 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
...|+|||+|..|+.+|..|++.|. +++|+|...+
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 4789999999999999999999998 6999998764
No 461
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.57 E-value=0.37 Score=44.18 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=29.4
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 71 PLDILVIGG-GATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGa-G~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
...|+|||+ |..|.++|+.++..|. +|+|+|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 357999997 9999999999999995 79999875
No 462
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=89.52 E-value=0.4 Score=43.28 Aligned_cols=33 Identities=21% Similarity=0.517 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4579999999999999999999998 79999885
No 463
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=89.46 E-value=0.37 Score=43.88 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCC----CeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRG----LRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G----~~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.| .+|+++++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 46999999999999999999999 7999998753
No 464
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=89.34 E-value=0.38 Score=42.31 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.|+|||+|.+|.+.|..|.+.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 465
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.31 E-value=0.45 Score=41.35 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC----eEEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGL----RVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~----~V~liEk~ 103 (442)
..|.|||+|..|.+.|..|++.|+ +|.++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 469999999999999999999998 99999885
No 466
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.31 E-value=0.25 Score=45.27 Aligned_cols=32 Identities=19% Similarity=0.526 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|..|+-+|..|++.| +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 57999999999999999999998 799998863
No 467
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.30 E-value=0.15 Score=44.01 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|+|+|-.|...|..|.+.|+ |+++|+.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 579999999999999999999999 99999874
No 468
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=89.26 E-value=0.49 Score=46.45 Aligned_cols=35 Identities=23% Similarity=0.543 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
...|+|||+|..|..+|..|++.|. +++|+|...+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4789999999999999999999998 6999998754
No 469
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.25 E-value=0.32 Score=42.74 Aligned_cols=30 Identities=23% Similarity=0.201 Sum_probs=27.6
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEec
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVER 102 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk 102 (442)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 489999999999999999999999999765
No 470
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.25 E-value=0.3 Score=43.58 Aligned_cols=30 Identities=27% Similarity=0.257 Sum_probs=28.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
.|.|||+|..|...|..|++ |++|+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 59999999999999999999 9999999875
No 471
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.14 E-value=0.57 Score=39.75 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=28.3
Q ss_pred cEEEEC-CChHHHHHHHHHH-HCCCeEEEEecc
Q 013476 73 DILVIG-GGATGCGVALDAA-TRGLRVGLVERE 103 (442)
Q Consensus 73 DVvVVG-aG~aGl~aA~~La-~~G~~V~liEk~ 103 (442)
-|+|.| +|..|..+|..|+ ++|++|+++.+.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 499999 4999999999999 899999999885
No 472
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=89.14 E-value=0.36 Score=42.97 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=30.4
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGa-G~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-.-..++|||. |++|..+|..|.+.|++|+++.+.
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 44578999995 569999999999999999999864
No 473
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.09 E-value=0.56 Score=39.04 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.0
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGa-G~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|+|+|| |..|...+.+|.++|++|+++.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 35999998 9999999999999999999999864
No 474
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.93 E-value=0.32 Score=42.75 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=28.7
Q ss_pred CcEEEECC-C-hHHHHHHHHHHHCCCeEEEEecc
Q 013476 72 LDILVIGG-G-ATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 72 ~DVvVVGa-G-~aGl~aA~~La~~G~~V~liEk~ 103 (442)
--|+|.|| | -.|..+|.+|+++|++|+++++.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 45899998 7 59999999999999999999875
No 475
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.86 E-value=0.44 Score=43.25 Aligned_cols=33 Identities=21% Similarity=0.492 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~--~V~liEk~ 103 (442)
...|+|||+|..|.+.|+.|+..|. +|+++|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3579999999999999999998875 79999985
No 476
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.78 E-value=0.42 Score=46.07 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=30.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
..-.|+|||.|..|..+|..|...|.+|+++|+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3457999999999999999999999999999985
No 477
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.73 E-value=0.44 Score=43.69 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||+|..|.+.|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 359999999999999999999999999998763
No 478
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=88.68 E-value=0.44 Score=42.04 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=30.1
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGa-G~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-.-..++|||. |++|..+|..|++.|++|+++.+.
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 34578999995 579999999999999999999754
No 479
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=88.64 E-value=0.51 Score=44.75 Aligned_cols=35 Identities=26% Similarity=0.625 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
...|+|||+|..|..+|..|++.|. +++|+|...+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 3789999999999999999999998 6999998754
No 480
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=88.62 E-value=1.1 Score=43.28 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCC
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~ 295 (442)
..+.+.|.+.+.+ ++|+++++|++|..+++ +|+ |++.+ .+....+.||.||+|+...
T Consensus 239 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~--~v~-v~~~~--g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGT--DNIVFGAEVTSMKNVSE--GVT-VEYTA--GGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCG--GGEETTCEEEEEEEETT--EEE-EEEEE--TTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCC--CeEEECCEEEEEEEcCC--eEE-EEEec--CCeEEEEECCEEEECCCHH
Confidence 4577777765532 78999999999998874 554 45443 2223579999999999864
No 481
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=88.42 E-value=0.088 Score=43.07 Aligned_cols=17 Identities=35% Similarity=0.378 Sum_probs=0.0
Q ss_pred CcchhhhhhhHHHHhhh
Q 013476 1 MSATRIRRFGAVLAAAA 17 (442)
Q Consensus 1 ~srR~f~~~~~~~~~~a 17 (442)
||||.|||+++++++++
T Consensus 10 ~~rr~fl~~~~~a~~~~ 26 (175)
T 4aay_B 10 IGRRQFLRGGALAAAGA 26 (175)
T ss_dssp -----------------
T ss_pred ccHHHHhhhhHHhhhhe
Confidence 68999999555444433
No 482
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.40 E-value=0.39 Score=42.25 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCe-EEEEecc
Q 013476 72 LDILVIGGGATGCGVALDAATRGLR-VGLVERE 103 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~-V~liEk~ 103 (442)
..|.|||+|..|...|..|++.|++ |.++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 3699999999999999999999998 8999875
No 483
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=88.37 E-value=0.56 Score=40.66 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=28.9
Q ss_pred cEEEECC-ChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 73 DILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGa-G~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-|+|.|| |..|..+|.+|+++|++|+++.+..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 3899986 9999999999999999999999864
No 484
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.32 E-value=0.5 Score=44.40 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...|+|||.|..|..+|..|...|.+|+++|+.
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999975
No 485
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=88.30 E-value=0.77 Score=43.60 Aligned_cols=33 Identities=27% Similarity=0.539 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHH--CCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAAT--RGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~--~G~~V~liEk~~ 104 (442)
.||||||||++|+++|++|++ .|++|+|||+++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 699999999999999999999 899999999986
No 486
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=88.28 E-value=0.47 Score=44.09 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=32.4
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHHCCC---eEEEEeccC
Q 013476 69 SNPLDILVIGG-GATGCGVALDAATRGL---RVGLVERED 104 (442)
Q Consensus 69 ~~~~DVvVVGa-G~aGl~aA~~La~~G~---~V~liEk~~ 104 (442)
.....|+|||+ |.+|+.|+..|...|+ .|+++|...
T Consensus 212 ~~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 212 ARKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 34589999999 9999999999999998 999999864
No 487
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=88.26 E-value=0.57 Score=43.03 Aligned_cols=35 Identities=17% Similarity=0.371 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEeccCC
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~~~ 105 (442)
...|+|||+|..|..+|..|++.|. +++|+|...+
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 5899999999999999999999998 7999998754
No 488
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=88.24 E-value=0.6 Score=41.21 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=30.2
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGa-G~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-....++|||. +++|..+|..|.+.|++|+++.+.
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 34578999996 568999999999999999999764
No 489
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=88.15 E-value=0.56 Score=44.39 Aligned_cols=32 Identities=25% Similarity=0.439 Sum_probs=29.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC---eEEEEe
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGL---RVGLVE 101 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~---~V~liE 101 (442)
....|+|+|+|-+|.++|..|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 34679999999999999999999998 799999
No 490
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=88.11 E-value=0.46 Score=41.97 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=29.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
...|+|||+|-+|.++++.|++.|. +|+|+.|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3579999999999999999999997 79999875
No 491
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=88.04 E-value=0.54 Score=43.16 Aligned_cols=34 Identities=32% Similarity=0.423 Sum_probs=30.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEecc
Q 013476 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 70 ~~~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~ 103 (442)
...-|+|+|.|.+|..+|..|.+.|.+|++.|..
T Consensus 174 ~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 174 DGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999999999999999999999999988753
No 492
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=88.02 E-value=0.87 Score=44.46 Aligned_cols=54 Identities=19% Similarity=0.162 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCCh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s 296 (442)
..+.+.|.+. .|++|+++++|++|..+++ +++ |.. .+|+ .+.||.||+|++...
T Consensus 215 ~~l~~~l~~~---lg~~i~~~~~V~~i~~~~~--~v~-v~~---~~g~--~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 215 GQVSERIMDL---LGDRVKLERPVIYIDQTRE--NVL-VET---LNHE--MYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHH---HGGGEESSCCEEEEECSSS--SEE-EEE---TTSC--EEEESEEEECSCGGG
T ss_pred HHHHHHHHHH---cCCcEEcCCeeEEEEECCC--eEE-EEE---CCCe--EEEeCEEEECCCHHH
Confidence 4566666543 3889999999999998774 443 433 3443 789999999999865
No 493
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.92 E-value=0.52 Score=46.68 Aligned_cols=33 Identities=27% Similarity=0.477 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
-.|+|||+|-.|...|..|.+.|.+|++||+.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~ 381 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQE 381 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCh
Confidence 679999999999999999999999999999985
No 494
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.71 E-value=0.47 Score=42.81 Aligned_cols=31 Identities=29% Similarity=0.498 Sum_probs=28.2
Q ss_pred EEEECCChHHHHHHHHHHHCCC-eEEEEeccC
Q 013476 74 ILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (442)
Q Consensus 74 VvVVGaG~aGl~aA~~La~~G~-~V~liEk~~ 104 (442)
|+|||+|.+|.+.|+.|+..|+ .|.|+|...
T Consensus 2 I~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 2 ITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 8999999999999999998888 599999863
No 495
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=87.58 E-value=0.67 Score=43.64 Aligned_cols=60 Identities=8% Similarity=0.004 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCceEecCeEEEEEEEcCCCCeEEEEEEEECCCCceEEEEcCEEEEccCCChHHHhhhh
Q 013476 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA 303 (442)
Q Consensus 232 ~~l~~~l~~~~~~~Gv~i~~~~~v~~l~~~~~g~~v~gV~~~~~~~g~~~~i~a~~VVlAtG~~s~~l~~~~ 303 (442)
..+...+.+.+++.|++++++++++++..+ . |++ .+|+ ++.+|.||+|+|...+.+++.+
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~----~---v~~---~~g~--~~~~D~vi~a~G~~~~~~l~~~ 277 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH----E---IVD---EKGN--TIPADITILLPPYTGNPALKNS 277 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS----E---EEE---TTSC--EEECSEEEEECCEECCHHHHTS
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC----e---EEE---CCCC--EEeeeEEEECCCCCccHHHHhc
Confidence 467778888889999999999999988532 3 344 3443 7999999999998776666654
No 496
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.47 E-value=0.48 Score=44.68 Aligned_cols=33 Identities=33% Similarity=0.492 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEecc
Q 013476 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (442)
Q Consensus 71 ~~DVvVVGaG~aGl~aA~~La~~G~-~V~liEk~ 103 (442)
...|+|||+|.+|..+|..|...|. +|+++++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4579999999999999999999998 89999875
No 497
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=87.43 E-value=0.71 Score=40.71 Aligned_cols=35 Identities=17% Similarity=0.099 Sum_probs=29.8
Q ss_pred CCCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEecc
Q 013476 69 SNPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (442)
Q Consensus 69 ~~~~DVvVVGaG-~aGl~aA~~La~~G~~V~liEk~ 103 (442)
-....++|||.| ++|..+|..|.+.|++|+++.+.
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 194 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF 194 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 345689999964 68999999999999999999653
No 498
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.30 E-value=0.65 Score=42.47 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGaG~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
..|.|||.|..|...|..|+..|.+|+++++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 469999999999999999999999999998853
No 499
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=87.13 E-value=0.32 Score=45.41 Aligned_cols=32 Identities=34% Similarity=0.491 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHHHC--CCeEEEEeccC
Q 013476 73 DILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (442)
Q Consensus 73 DVvVVGaG~aGl~aA~~La~~--G~~V~liEk~~ 104 (442)
||+|||||++|+++|+.|+++ |.+|+||||..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 899999999999999999999 99999999986
No 500
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=87.10 E-value=0.6 Score=41.28 Aligned_cols=33 Identities=15% Similarity=0.266 Sum_probs=29.0
Q ss_pred CcEEEECC---ChHHHHHHHHHHHCCCeEEEEeccC
Q 013476 72 LDILVIGG---GATGCGVALDAATRGLRVGLVERED 104 (442)
Q Consensus 72 ~DVvVVGa---G~aGl~aA~~La~~G~~V~liEk~~ 104 (442)
--|+|.|| |..|..+|..|+++|++|+++.+..
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34899997 6899999999999999999998864
Done!