BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013480
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32L63|VTA1_BOVIN Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos
taurus GN=VTA1 PE=2 SV=1
Length = 307
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 14 YLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVSLMNQLEKDKKSLKLG 73
+L+ A E K +P+VAYYCRLYAM+ G++I +T L LM+QLE KK +LG
Sbjct: 20 HLRTAQEHDKRDPVVAYYCRLYAMQTGMKI--DSKTPECRKFLSRLMDQLEALKK--QLG 75
Query: 74 PEDSL--------HLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQ 125
+++ HLE +AL +F AD +DRAGR N K+FY AS+ +++ FG L
Sbjct: 76 DNEAITQEIVGSAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELT 135
Query: 126 PDLEEKQKYAAWKAADIRKAMKEGRKPVPGPPGGGED 162
+ + +KYA WKA I +K G P GP G ED
Sbjct: 136 DENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEED 172
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 399 PEKISEAHKAARFAVGALAFDDVSVAVDYLKKSLELLTN 437
PE + A K ++A AL ++DVS AV L+K+L+LLT
Sbjct: 266 PEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTT 304
>sp|Q55B11|VTA1_DICDI Vacuolar protein sorting-associated protein VTA1 homolog
OS=Dictyostelium discoideum GN=vta1 PE=3 SV=1
Length = 550
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 100/153 (65%), Gaps = 9/153 (5%)
Query: 11 LLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLL----VSLMNQLEKD 66
++PYL+++ +L+KH+ L+AYYCR++A++ + I Q + + S L V +++Q + D
Sbjct: 13 IIPYLKQSQQLEKHDLLMAYYCRVHAIQMAMDIKQ--KMGASGSFLSIPIVKILDQGDAD 70
Query: 67 KKSL--KLGPED-SLHLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGA 123
K L +L ED + ++E FA+ F+ AD QDRAG+A+ T+ TFY+A +FF +L G
Sbjct: 71 KAKLGSRLDEEDEAKYVEAFAMKAFSFADTQDRAGKANKATSTTFYSAFLFFNVLEHMGE 130
Query: 124 LQPDLEEKQKYAAWKAADIRKAMKEGRKPVPGP 156
+ +++ K+KYA+W++ DI A+K G P P P
Sbjct: 131 VSEEVKLKKKYASWRSVDINTAIKNGVAPSPPP 163
>sp|Q9NP79|VTA1_HUMAN Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo
sapiens GN=VTA1 PE=1 SV=1
Length = 307
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 14 YLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVSLMNQLEKDKKSLKLG 73
+L+ A E K +P+VAYYCRLYAM+ G++I +T L LM+QLE KK +LG
Sbjct: 20 HLRTAQEHDKRDPVVAYYCRLYAMQTGMKID--SKTPECRKFLSKLMDQLEALKK--QLG 75
Query: 74 PEDSL--------HLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQ 125
+++ HLE +AL +F AD +DRAGR N K+FY AS+ +++ FG L
Sbjct: 76 DNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELT 135
Query: 126 PDLEEKQKYAAWKAADIRKAMKEGRKPVPGPPG 158
+ + +KYA WKA I +K G P GP G
Sbjct: 136 DENVKHRKYARWKATYIHNCLKNGETPQAGPVG 168
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 399 PEKISEAHKAARFAVGALAFDDVSVAVDYLKKSLELLT 436
PE + A K ++A AL ++DVS AV L+K+L+LLT
Sbjct: 266 PEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLT 303
>sp|Q5R5W5|VTA1_PONAB Vacuolar protein sorting-associated protein VTA1 homolog OS=Pongo
abelii GN=VTA1 PE=2 SV=1
Length = 307
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 14 YLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVSLMNQLEKDKKSLKLG 73
+L+ A E K +P+VAYYCRLYAM+ G++I +T L LM+QLE KK +LG
Sbjct: 20 HLRTAQEHDKRDPVVAYYCRLYAMQTGMKID--SKTPECRKFLSKLMDQLEALKK--QLG 75
Query: 74 PEDSL--------HLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQ 125
+++ HLE +AL +F AD +DRAGR N K+FY AS+ +++ FG L
Sbjct: 76 DNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELT 135
Query: 126 PDLEEKQKYAAWKAADIRKAMKEGRKPVPGPPG 158
+ + +KYA WKA I +K G P GP G
Sbjct: 136 DENVKHRKYARWKATYIHNCLKNGETPQAGPVG 168
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 399 PEKISEAHKAARFAVGALAFDDVSVAVDYLKKSLELLT 436
PE + A K ++A AL ++DVS AV L+K+L+LLT
Sbjct: 266 PEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLT 303
>sp|Q9CR26|VTA1_MOUSE Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus
musculus GN=Vta1 PE=1 SV=1
Length = 309
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 14 YLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVSLMNQLEKDKKSLKLG 73
+L+ A E K +P+VAYYCRLYAM+ G++I +T L LM+QLE KK +LG
Sbjct: 20 HLRTAQEHDKRDPVVAYYCRLYAMQTGMKID--SKTPECRKFLSKLMDQLEALKK--QLG 75
Query: 74 PEDSL--------HLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQ 125
+++ HLE +AL +F AD +DRAGR N K+FY AS+ +++ FG L
Sbjct: 76 DNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELT 135
Query: 126 PDLEEKQKYAAWKAADIRKAMKEGRKPVPGPPG 158
+ + +KYA WKA I +K G P GP G
Sbjct: 136 DENVKHRKYARWKATYIHNCLKNGETPQAGPVG 168
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 399 PEKISEAHKAARFAVGALAFDDVSVAVDYLKKSLELLTN 437
PE + A K ++A AL ++DV AV L+K+L LLT
Sbjct: 268 PEDFARAQKYCKYAGSALQYEDVGTAVQNLQKALRLLTT 306
>sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3
SV=2
Length = 1921
Score = 59.3 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 1 MASETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVS 58
M SE P+ L + P L+ A+E++K P VAY CR +A E+ R+ +
Sbjct: 38 MDSELVPSSLASIAPILRVANEIEKDNPRVAYLCRFHAFEKAHRMDATSSGRGVRQFKTY 97
Query: 59 LMNQLEKDKKSLK--LGPEDSLHLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFE 116
L+++LEK+++ K L D ++ + N + K K+ R A+ + AS+ ++
Sbjct: 98 LLHRLEKEEEETKPQLAKNDPREIQAYYQNFYEKYIKEGETSRKPEEMARLYQIASVLYD 157
Query: 117 IL 118
+L
Sbjct: 158 VL 159
>sp|O13703|VTA1_SCHPO Vacuolar protein sorting-associated protein vts1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vts1 PE=3 SV=2
Length = 389
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 13 PYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVSLMNQLEKDKKSL-- 70
P+++R +EL+ H P++AY+ +A + L G + + L+SL+ LE +K+L
Sbjct: 16 PFVRRFNELEAHNPVIAYWSLYWAAQMALSSSHGVSNECKD-FLLSLIEHLEDLRKNLGE 74
Query: 71 --KLGPEDS--LHLEGFALNVFAKADKQDRAGRADLNTAKTFYAASIFFEILNQFGALQP 126
+ E S ++E F+L V +A++ + G+ D+ + + AA F E+ +G
Sbjct: 75 NENVSDETSAKAYVESFSLEVLVQAERNSKNGKPDV---QAYLAARDFLELSRIWGPPTE 131
Query: 127 DLEEKQKYAAWKAADIRKAMKEGRKP 152
+ + K+ +A + ++ + P
Sbjct: 132 QITKSIKFCKLRALQVANPQRKAKTP 157
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 400 EKISEAHKAARFAVGALAFDDVSVAVDYLKKSLELLTNPSAG 441
E I A AR+A AL ++D + A+ +LK +L+LL G
Sbjct: 343 EAIQSARSHARYAYSALDYEDTTTAIHHLKSALKLLEEEEQG 384
>sp|Q9SL03|CALS2_ARATH Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=3
Length = 1950
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 1 MASETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVS 58
+ SE P+ L + P L+ A+E++ P VAY CR YA E+ R+ + +
Sbjct: 30 LDSEVVPSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTA 89
Query: 59 LMNQLEKDKKSLKLGPE--DSLHLEGFALNVFAK-----ADKQDRAGRADLNTAKTFYAA 111
L+ +LE++ ++ G + D+ ++ F + + K + D+A RA L K + A
Sbjct: 90 LLQRLERENETTLAGRQKSDAREMQSFYQHYYKKYIQALQNAADKADRAQL--TKAYQTA 147
Query: 112 SIFFEIL 118
++ FE+L
Sbjct: 148 AVLFEVL 154
>sp|Q9AUE0|CALS1_ARATH Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2
Length = 1950
Score = 56.6 bits (135), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 1 MASETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVS 58
+ SE P+ L + P L+ A+E++ P VAY CR YA E+ R+ + +
Sbjct: 30 LDSEVVPSSLVEIAPILRVANEVEASNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTA 89
Query: 59 LMNQLEKDKKSLKLGPE--DSLHLEGFALNVFAK--------ADKQDRAGRADLNTAKTF 108
L+ +LE++ ++ G + D+ ++ F + + K ADK DRA K +
Sbjct: 90 LLQRLERENETTLAGRQKSDAREMQSFYQHYYKKYIQALLNAADKADRA-----QLTKAY 144
Query: 109 YAASIFFEIL 118
A++ FE+L
Sbjct: 145 QTAAVLFEVL 154
>sp|Q9LXT9|CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=3
Length = 1955
Score = 55.5 bits (132), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 3 SETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVSLM 60
SE P+ L + P L+ A+E++ P VAY CR YA E+ R+ + +L+
Sbjct: 35 SEVVPSSLVEIAPILRVANEVESSNPRVAYLCRFYAFEKAHRLDPTSSGRGVRQFKTALL 94
Query: 61 NQLEKDKKSLKLG---PEDSLHLEGFALNVFAK--------ADKQDRAGRADLNTAKTFY 109
+LE++ +G D+ ++ F + + K ADK DRA K +
Sbjct: 95 QRLEREHDPTLMGRVKKSDAREMQSFYQHYYKKYIQALHNAADKADRA-----QLTKAYQ 149
Query: 110 AASIFFEILNQFGALQ 125
A++ FE+L Q
Sbjct: 150 TANVLFEVLKAVNLTQ 165
>sp|Q3B724|CALS5_ARATH Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1
Length = 1923
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 4 ETEPAKL--LLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNSLLVSLMN 61
E PA L + P L+ A E++ P VAY CR YA E+ R+ + L
Sbjct: 35 EVVPASLGTIAPILRVAAEIEHERPRVAYLCRFYAFEKAHRLDPSSGGRGVRQFKTLLFQ 94
Query: 62 QLEKDKKS---LKLGPEDSLHLEGFALNVFAK----ADKQDRAGRADLNTAKTFYAASIF 114
+LE+D S ++ D +E F + D+ D+A RA L K + A +
Sbjct: 95 RLERDNASSLASRVKKTDGREVESFYQQYYEHYVRALDQGDQADRAQL--GKAYQTAGVL 152
Query: 115 FEIL 118
FE+L
Sbjct: 153 FEVL 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,913,205
Number of Sequences: 539616
Number of extensions: 9329441
Number of successful extensions: 33238
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 1384
Number of HSP's that attempted gapping in prelim test: 27961
Number of HSP's gapped (non-prelim): 4331
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)