Query 013482
Match_columns 442
No_of_seqs 225 out of 809
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 11:25:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013482.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013482hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lw3_A Myotubularin-related pr 94.2 0.66 2.3E-05 49.7 14.4 98 73-170 78-185 (657)
2 2hth_B Vacuolar protein sortin 93.9 1.1 3.6E-05 38.7 12.8 97 76-174 13-131 (140)
3 2cay_A VPS36 PH domain, vacuol 92.8 0.56 1.9E-05 40.7 9.3 96 77-175 26-136 (145)
4 1zsq_A Myotubularin-related pr 92.4 1.9 6.6E-05 45.1 14.5 96 74-169 7-112 (528)
5 1t77_A Lipopolysaccharide-resp 92.2 0.29 9.8E-06 49.7 7.6 80 82-162 3-97 (414)
6 2yf0_A Myotubularin-related pr 86.0 3.3 0.00011 43.1 10.2 73 93-170 22-95 (512)
7 4a8u_A Major pollen allergen B 85.6 10 0.00036 32.9 12.0 117 284-418 6-123 (159)
8 2qim_A PR10.2B; trans-zeatin, 85.0 18 0.00061 31.1 13.5 116 284-418 7-123 (158)
9 2wql_A Major allergen DAU C 1; 83.7 11 0.00038 32.6 11.1 115 285-418 8-123 (154)
10 2vjg_A Major allergen DAU C 1; 83.5 15 0.00051 31.7 11.9 115 284-417 7-122 (154)
11 1icx_A Protein LLR18A, LLPR10. 82.8 19 0.00064 30.9 12.3 117 284-418 6-122 (155)
12 2flh_A Cytokinin-specific bind 82.0 17 0.00058 31.2 11.7 114 283-418 5-123 (155)
13 3rws_A MTN13 protein; zeatin, 80.9 14 0.00047 32.5 10.8 113 282-417 10-127 (168)
14 1tw0_A Pathogenesis-related cl 80.6 19 0.00065 31.0 11.5 117 284-418 6-122 (157)
15 1pfj_A TFIIH basal transcripti 78.4 14 0.00048 30.2 9.1 92 77-175 4-104 (108)
16 1e09_A PRU AV 1; allergen, maj 77.7 15 0.00052 31.6 10.0 115 284-417 6-122 (159)
17 2i9y_A Major latex protein-lik 76.2 11 0.00039 32.8 8.8 119 281-417 17-136 (166)
18 2dn6_A KIAA0640 protein; PH do 70.3 25 0.00087 27.5 9.0 62 101-163 30-91 (115)
19 2cod_A Centaurin-delta 1; ARF 67.1 9.3 0.00032 30.4 5.6 52 101-157 31-82 (115)
20 3kl1_A PYL2, putative uncharac 66.5 50 0.0017 29.5 10.9 120 279-414 33-152 (190)
21 1em2_A MLN64 protein; beta bar 61.1 71 0.0024 28.7 11.1 122 285-417 70-197 (229)
22 3p0l_A Steroidogenic acute reg 59.5 39 0.0013 30.3 9.0 121 285-418 59-187 (221)
23 1fao_A Dual adaptor of phospho 58.3 26 0.0009 28.0 6.9 56 101-157 40-95 (126)
24 1jss_A Stard4, cholesterol-reg 57.1 83 0.0028 28.2 10.8 120 285-417 71-195 (224)
25 3k3k_A Abscisic acid receptor 57.0 19 0.00066 32.9 6.3 113 278-416 47-161 (211)
26 3f08_A Uncharacterized protein 55.1 70 0.0024 26.8 9.3 100 285-414 6-108 (146)
27 3jrs_A PYL1, putative uncharac 54.9 33 0.0011 31.2 7.6 103 278-397 51-153 (208)
28 2pso_A STAR-related lipid tran 52.2 68 0.0023 29.3 9.4 49 366-417 148-200 (237)
29 2vq5_A S-norcoclaurine synthas 51.1 1.4E+02 0.0047 26.8 11.9 114 283-418 31-149 (201)
30 3ie5_A Phenolic oxidative coup 50.4 1.2E+02 0.0043 26.1 11.0 115 282-418 11-129 (165)
31 1w7p_D VPS36P, YLR417W; ESCRT- 47.9 3.8 0.00013 43.2 0.0 41 95-135 42-82 (566)
32 3oji_A Abscisic acid receptor 47.6 84 0.0029 28.1 8.9 104 280-394 29-133 (189)
33 2d9z_A Protein kinase C, NU ty 46.9 23 0.00077 29.9 4.6 54 103-156 32-90 (129)
34 1v5u_A SBF1, SET binding facto 46.5 94 0.0032 24.1 8.4 64 104-168 35-104 (117)
35 1eaz_A Tandem PH domain contai 44.7 51 0.0018 26.0 6.6 55 102-156 37-93 (125)
36 1zyi_A Methylosome subunit pic 44.6 21 0.00072 31.6 4.3 46 86-134 32-79 (171)
37 2coa_A Protein kinase C, D2 ty 44.0 21 0.00071 30.0 3.9 53 103-155 32-89 (125)
38 1pls_A Pleckstrin homology dom 43.3 1.1E+02 0.0038 23.6 9.2 62 101-163 27-89 (113)
39 1zc3_B Exocyst complex protein 41.9 1.1E+02 0.0036 24.7 8.0 57 99-156 29-89 (113)
40 2gcl_A Hypothetical 63.0 kDa p 41.5 27 0.00094 33.0 4.8 78 85-174 166-251 (261)
41 3f5r_A FACT complex subunit PO 38.7 1.6E+02 0.0055 26.3 9.2 87 84-174 24-117 (191)
42 3qsz_A STAR-related lipid tran 38.1 1.9E+02 0.0065 24.7 10.9 47 366-416 100-150 (189)
43 2pcs_A Conserved protein; stru 37.6 1.7E+02 0.0059 24.0 15.0 110 284-416 6-116 (162)
44 3rt2_A Abscisic acid receptor 30.8 2.7E+02 0.0094 24.4 10.3 116 278-413 24-141 (183)
45 2le1_A Uncharacterized protein 28.4 2.4E+02 0.0082 22.9 9.0 104 285-413 6-111 (151)
46 2dhk_A TBC1 domain family memb 27.8 1.1E+02 0.0037 24.2 5.8 56 103-162 34-91 (119)
47 3fss_A Histone chaperone RTT10 27.7 1.2E+02 0.0042 28.1 6.6 74 85-170 157-233 (237)
48 3tfm_A Myosin X; split PH doma 26.8 1.4E+02 0.0048 26.9 7.0 63 101-167 85-147 (228)
49 2ns9_A Hypothetical protein AP 26.2 2.6E+02 0.0088 22.5 14.3 111 282-417 14-125 (157)
50 1btk_A Bruton'S tyrosine kinas 26.0 3.1E+02 0.01 23.3 9.8 70 101-171 30-128 (169)
51 3fo5_A Thioesterase, adipose a 24.3 2.1E+02 0.0072 26.6 7.9 46 366-414 165-215 (258)
52 1v89_A Hypothetical protein KI 23.7 1.8E+02 0.006 22.3 6.3 64 101-165 30-102 (118)
53 1ou8_A Stringent starvation pr 22.6 94 0.0032 25.4 4.3 38 97-134 59-96 (111)
54 1yfn_A Stringent starvation pr 22.0 97 0.0033 25.6 4.3 38 97-134 60-97 (118)
55 1x1f_A Signal-transducing adap 21.9 1.2E+02 0.0041 25.7 5.2 55 102-156 41-95 (149)
56 3qrz_A Abscisic acid receptor 21.0 7.6 0.00026 36.0 -2.9 116 278-413 75-190 (223)
57 1ou9_A Stringent starvation pr 20.9 1E+02 0.0036 25.8 4.3 38 97-134 59-96 (129)
58 1ln1_A PC-TP, phosphatidylchol 20.6 4.1E+02 0.014 22.9 12.1 118 284-417 55-181 (214)
No 1
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=94.15 E-value=0.66 Score=49.74 Aligned_cols=98 Identities=10% Similarity=-0.069 Sum_probs=63.5
Q ss_pred hCCCCCCCeeeEEEEEEEe-e--cceeeeEEEEecceEEEEeccCCceeEEEEecccccccccccc---ccccCcEEEEE
Q 013482 73 LFRLPSEEVLVQDFNCAFQ-E--SILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKT---AGIFPNAIEIF 146 (442)
Q Consensus 73 lF~lp~~E~li~~f~Cal~-~--~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~---~~~~pnaI~I~ 146 (442)
-|.|=++|.++..-.-.+. . .-.+.|.||||..+|.|.+.--.....+-||+.-|..|+|..+ .+-.+..|.|.
T Consensus 78 ~~~LLPGE~v~~~~~~V~~~~p~~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~ 157 (657)
T 1lw3_A 78 EPPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETV 157 (657)
T ss_dssp CCCCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEE
T ss_pred CCccCCCeeEEEEeCCEEEecCCCCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEE
Confidence 4664458888865333222 1 2468999999999999998532224467899999999999642 12235689999
Q ss_pred eCCeEEEEeecCC----HHHHHHHHHHH
Q 013482 147 AAGKKYFFASFLS----RDEAFKLITDG 170 (442)
Q Consensus 147 t~~~~~~F~sF~~----rd~~~~li~~~ 170 (442)
.++-+.+=-.|.. +.+.|..|.++
T Consensus 158 CKDfR~~~f~f~~~~~~~~~v~~~L~~~ 185 (657)
T 1lw3_A 158 CKDIRNLRFAHKPEGRTRRSIFENLMKY 185 (657)
T ss_dssp ETTTEEEEEECCGGGCCHHHHHHHHHHH
T ss_pred ecCCcEEEEEeCCccchHHHHHHHHHHH
Confidence 9875433223432 44566666553
No 2
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=93.89 E-value=1.1 Score=38.73 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=63.5
Q ss_pred CCCCCeeeE-EEEEEEee----cceeeeEEEEecceEEEEeccCCceeEEEEeccccccccccccccccCcE-EEEEeC-
Q 013482 76 LPSEEVLVQ-DFNCAFQE----SILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNA-IEIFAA- 148 (442)
Q Consensus 76 lp~~E~li~-~f~Cal~~----~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pna-I~I~t~- 148 (442)
|.++|.++. .=.+.|.. .-...|++|+|.+.|||...-- ....+.|||..|..++..... +..++ |.+.-.
T Consensus 13 L~~~E~il~~~~~V~Ly~g~~k~~~k~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~-f~~s~Ki~l~l~~ 90 (140)
T 2hth_B 13 LEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAG-IGKSAKIVVHLHP 90 (140)
T ss_dssp CCTTCCEEEEEEEEEEEETTCSSCCCCEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCT-TSSCCEEEEEECC
T ss_pred cCCCceEEEEcCCEEEecCCCCCCCcCCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeeccc-cccCceEEEEecC
Confidence 556666554 34555552 3567899999999999986543 356799999999999998753 33221 222211
Q ss_pred -------------CeEEEEeecCC--HHHHHHHHHHHHHhc
Q 013482 149 -------------GKKYFFASFLS--RDEAFKLITDGWLQH 174 (442)
Q Consensus 149 -------------~~~~~F~sF~~--rd~~~~li~~~w~~~ 174 (442)
+..++=.+|.+ .++-+..|.+.+++.
T Consensus 91 ~~~~~~~gp~~~s~~~~~kLsFr~Gg~~eF~~~L~~al~~k 131 (140)
T 2hth_B 91 APPNKEPGPFQSSKNSYIKLSFKEHGQIEFYRRLSEEMTQR 131 (140)
T ss_dssp CCCCSSSCCCSTTSCCEEEEEETTSCHHHHHHHHHHHHHHC
T ss_pred CCccCCCCCcccccCcEEEEEEcCCCChHHHHHHHHHHHHh
Confidence 23344456653 678888888877664
No 3
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=92.80 E-value=0.56 Score=40.74 Aligned_cols=96 Identities=7% Similarity=-0.026 Sum_probs=61.3
Q ss_pred CCCCeeeE-EEEEEEee-----cceeeeEEEEecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEE----
Q 013482 77 PSEEVLVQ-DFNCAFQE-----SILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIF---- 146 (442)
Q Consensus 77 p~~E~li~-~f~Cal~~-----~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~---- 146 (442)
.++|.++. .=...|.. .-.-.|++|||.+.|||-..--.....+.+||..|.+++..... +..+ +.|.
T Consensus 26 ~~~E~il~~~d~V~Ly~g~~k~~~~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~-fg~s-~Ki~l~~~ 103 (145)
T 2cay_A 26 REGEKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF-LTRS-PRLILFFK 103 (145)
T ss_dssp CTTCCEEEEEEEEEEEETTEECTTCSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSS-SSSS-CEEEEEES
T ss_pred CCCCEEEEEcCCcceecCCCCCcCCCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCc-cccC-ceEEEEec
Confidence 34555544 33444442 34578999999999999865432236789999999999998652 3344 3443
Q ss_pred --eCC---eEEEEeecCCHHHHHHHHHHHHHhcC
Q 013482 147 --AAG---KKYFFASFLSRDEAFKLITDGWLQHG 175 (442)
Q Consensus 147 --t~~---~~~~F~sF~~rd~~~~li~~~w~~~~ 175 (442)
..+ -|..|.+=.. ++-+..|.+.|++..
T Consensus 104 p~~~~~~~~KLsFk~GGa-~eF~~~l~~al~~~~ 136 (145)
T 2cay_A 104 DPSSSTEFVQLSFRKSDG-VLFSQATERALENIL 136 (145)
T ss_dssp SCSSTTCCEEEEESSSCC-HHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEEcCCCc-hHHHHHHHHHHHHHH
Confidence 122 3455544333 777788888887754
No 4
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=92.45 E-value=1.9 Score=45.11 Aligned_cols=96 Identities=10% Similarity=-0.047 Sum_probs=61.6
Q ss_pred CCCCCCCeeeEEEEEEEe-e--cceeeeEEEEecceEEEEeccCCceeEEEEecccccccccccc---ccccCcEEEEEe
Q 013482 74 FRLPSEEVLVQDFNCAFQ-E--SILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKT---AGIFPNAIEIFA 147 (442)
Q Consensus 74 F~lp~~E~li~~f~Cal~-~--~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~---~~~~pnaI~I~t 147 (442)
|.|=++|.++..-.-.+. . .-.+.|.||||..+|.|.+.--.....+-||+.-|..|+|..+ .+-.+..|.|..
T Consensus 7 ~~lLpGE~i~~~~~~V~~~~~~~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~C 86 (528)
T 1zsq_A 7 PPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVC 86 (528)
T ss_dssp CCCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEE
T ss_pred CccCCCCeEEEecCCEEEeCCCCCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEc
Confidence 454457877755332222 2 2368999999999999998532234568899999999999653 122356899999
Q ss_pred CCeEEEEeecCC----HHHHHHHHHH
Q 013482 148 AGKKYFFASFLS----RDEAFKLITD 169 (442)
Q Consensus 148 ~~~~~~F~sF~~----rd~~~~li~~ 169 (442)
++-+.+=-.|.. +.+.|+.|.+
T Consensus 87 KDfr~~~f~f~~~~~~~~~v~~~L~~ 112 (528)
T 1zsq_A 87 KDIRNLRFAHKPEGRTRRSIFENLMK 112 (528)
T ss_dssp TTTEEEEEECCGGGCCHHHHHHHHHH
T ss_pred cCCeEEEEEecCchHHHHHHHHHHHH
Confidence 875433223432 4445555544
No 5
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=92.20 E-value=0.29 Score=49.70 Aligned_cols=80 Identities=15% Similarity=0.171 Sum_probs=58.8
Q ss_pred eeEEEEEEEee-cceeeeEEEEecceEEEEecc----CC----------ceeEEEEeccccccccccccccccCcEEEEE
Q 013482 82 LVQDFNCAFQE-SILLQGHMYLFVHFICFYSNI----FG----------FETKKIIPFYEVTAVRRAKTAGIFPNAIEIF 146 (442)
Q Consensus 82 li~~f~Cal~~-~i~~~GrlYis~~~icF~S~~----~g----------~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~ 146 (442)
++-++.|.+.. .....|+|.||...|+|...- |. ......+++++|..|-+..- ...++||+|.
T Consensus 3 v~~~~~~~~i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rry-ll~~~alEif 81 (414)
T 1t77_A 3 VSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRY-LLQNTALEIF 81 (414)
T ss_dssp CSEEEEEEEECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEEEEEeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeec-cCcceeEEEE
Confidence 55678899874 678899999999999998521 10 01123689999999988754 4568999999
Q ss_pred eCCeEEEEeecCCHHH
Q 013482 147 AAGKKYFFASFLSRDE 162 (442)
Q Consensus 147 t~~~~~~F~sF~~rd~ 162 (442)
+.+++-+|-.|.+.+.
T Consensus 82 ~~~g~s~~l~F~~~~~ 97 (414)
T 1t77_A 82 MANRVAVMFNFPDPAT 97 (414)
T ss_dssp ETTSCEEEEECSSHHH
T ss_pred EcCCcEEEEEcCCHHH
Confidence 8866556667887543
No 6
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=85.98 E-value=3.3 Score=43.14 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=48.5
Q ss_pred cceeeeEEEEecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCCe-EEEEeecCCHHHHHHHHHHH
Q 013482 93 SILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGK-KYFFASFLSRDEAFKLITDG 170 (442)
Q Consensus 93 ~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~-~~~F~sF~~rd~~~~li~~~ 170 (442)
...+.|.||||..+|-|.+. ....+-||+.-|..|+|.+... -...|.|..++- .+.| .|..-+++.++...+
T Consensus 22 ~~~~~GtL~lTn~~LiF~~~---~~~e~wi~~~~I~~VeK~~~~~-~~~~l~I~CKDfr~~~f-~f~~~~~~~~v~~sL 95 (512)
T 2yf0_A 22 NKSLTGTLYLTATHLLFIDS---HQKETWILHHHIASVEKLALTT-SGCPLVIQCKNFRTVHF-IVPRERDCHDIYNSL 95 (512)
T ss_dssp --CCEEEEEECSSEEEEEES---SSCEEEEEGGGEEEEEECCCBT-TBEEEEEEETTSCEEEE-EESCHHHHHHHHHHH
T ss_pred CCceeEEEEEECCEEEEeCC---CCCceEecccceeEEEEecCCC-CCceEEEEecCCcEEEE-EeCChHHHHHHHHHH
Confidence 34678999999999999983 2345789999999999975321 114688888874 3344 355444444444333
No 7
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=85.59 E-value=10 Score=32.86 Aligned_cols=117 Identities=13% Similarity=0.119 Sum_probs=63.7
Q ss_pred eeeeEEecCHHHHHhhhccCCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEE
Q 013482 284 VAETNFQMKVEDFYSLFFSDDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFR 362 (442)
Q Consensus 284 v~e~~f~isv~~lF~llFsd~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~ 362 (442)
-.|.+.+++++++|.++..|-. ..+.+.+- .....++.-+.|. .|..|.++|. -|.+.. .-++++.
T Consensus 6 ~~ei~i~a~a~kvw~~~~~d~~-~l~pk~~P~~i~s~e~~eGdgg----~Gsir~~~~~------~g~~~~--~~kErl~ 72 (159)
T 4a8u_A 6 ETEATSVIPAARLFKAFILDGD-NLFPKVAPQAISSVENIEGNGG----PGTIKKISFP------EGFPFK--YVKDRVD 72 (159)
T ss_dssp EEEEEESSCHHHHHHHHTTTHH-HHHHHHCTTTCCEEEEEECSSS----TTCEEEEECC------TTSSCS--EEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcc-ccchhhCchhccEEEEEcCCCC----CceEEEEEEe------cCCCcc--EEEEEEE
Confidence 3467889999999998866642 33444442 3344455567773 3689999875 133322 3457777
Q ss_pred EecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 363 VYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 363 ~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
..++....+.-+..-.|++-..+=.....+.+.+.++ ++|.++.. +.|.+.
T Consensus 73 ~iD~~~~~~~y~iiegd~l~~~~~~y~~ti~v~p~~~---ggs~v~wt--~~y~~~ 123 (159)
T 4a8u_A 73 EVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPN---GGSILKIN--NKYHTK 123 (159)
T ss_dssp EEETTTTEEEEEEEEETTCBTTEEEEEEEEEEEECTT---SCEEEEEE--EEEEES
T ss_pred EEccccCEEEEEEeeCCCCccceEEEEEEEEEEECCC---CceEEEEE--EEEEEC
Confidence 6655442333333223443111223444566666543 46765544 455543
No 8
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=85.04 E-value=18 Score=31.14 Aligned_cols=116 Identities=15% Similarity=0.074 Sum_probs=63.1
Q ss_pred eeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEEE
Q 013482 284 VAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFRV 363 (442)
Q Consensus 284 v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~~ 363 (442)
..+.+++++++++|.++-.|-. +.+.+++......++.-+.|. .|..|.++|. + |.+... -++++..
T Consensus 7 ~~e~~i~a~a~kvw~~~~~d~~-~~~pk~~~~i~s~~i~eGdgg----~Gsir~~~~~-~-----g~~~~~--~kErl~~ 73 (158)
T 2qim_A 7 QDEYTSTIAPAKLYKALVTDAD-IIIPKAVETIQSVEIVEGNGG----PGTIKKLTFI-E-----GGESKY--VLHKIEA 73 (158)
T ss_dssp EEEEEESSCHHHHHHHHTTTHH-HHHHHHCTTEEEEEEEESSSS----TTCEEEEEEE-E-----TTEEEE--EEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcc-chhhhHHhhCcEEEEEecCCC----CCeEEEEEEc-C-----CCccee--EEEEEEE
Confidence 4567899999999996553532 345666644444455567662 2679999986 1 332222 3466654
Q ss_pred ecCCeEEEEEEEEeCCCCCCC-ceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 364 YRNSHLVIETSQEVHDVPYGD-YFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 364 ~~~~~~vVe~~~~~~dVPygD-~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
.++....+.-+..--|+ ..+ +=.....|.+.+.+. ++|.++.. +.|.+.
T Consensus 74 ~D~~~~~~~y~iieG~~-~~~~~~~~~~~~~v~~~~~---~gs~v~wt--~~y~~~ 123 (158)
T 2qim_A 74 IDEANLGYNYSIVGGVG-LPDTIEKISFETKLVEGAN---GGSIGKVT--IKIETK 123 (158)
T ss_dssp EEGGGTEEEEEEEEESS-CCCSEEEEEEEEEEEECST---TCEEEEEE--EEEEES
T ss_pred EecCCCEEEEEEEeccC-CccceEEEEEEEEEEecCC---CCEEEEEE--EEEEEC
Confidence 44433222222222232 222 334566777777543 36765544 455543
No 9
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=83.67 E-value=11 Score=32.63 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=65.3
Q ss_pred eeeEEecCHHHHHhhhccCCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEEE
Q 013482 285 AETNFQMKVEDFYSLFFSDDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFRV 363 (442)
Q Consensus 285 ~e~~f~isv~~lF~llFsd~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~~ 363 (442)
.|.+.++|+++||.++..|.. +++.+.+- ..+..++ -+.| ..|..|.++|.. |.+. ..-++++..
T Consensus 8 ~E~~~~v~a~kl~ka~v~d~~-~l~Pk~~P~~iks~~v-eGdg----~~Gsir~~t~~~------g~~~--~~~kErle~ 73 (154)
T 2wql_A 8 LEITSSVSAEKIFSGIVLDVD-TVIPKAATGAYKSVEV-KGDG----GAGTVRIITLPE------GSPI--TTMTVRTDA 73 (154)
T ss_dssp EEEEESSCHHHHHHHHTTTHH-HHHHHHSTTTCSEEEE-ESSS----STTCEEEEECCT------TCSC--CEEEEEEEE
T ss_pred EEEEecCCHHHHHHHHhhccc-ccchhhcccceeEEEE-ECCC----CCCeEEEEEEcC------CCCc--eEEEEEEEE
Confidence 456789999999999888753 44555442 2233332 2333 236789988732 2222 234678876
Q ss_pred ecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 364 YRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 364 ~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
.++....+.-+..--|+....+=.+.....+.+.++ ++|.++. .+.|.+.
T Consensus 74 iD~~~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~---ggsvvk~--t~~Y~~~ 123 (154)
T 2wql_A 74 VNKEALSYDSTVIDGDILLGFIESIETHMVVVPTAD---GGSITKT--TAIFHTK 123 (154)
T ss_dssp EETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTT---SCEEEEE--EEEEEES
T ss_pred EehhhCEEEEEEEeccccccceEEEEEEEEEeeCCC---CcEEEEE--EEEEEEC
Confidence 766555555555545543333333445555666543 5776555 4556654
No 10
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=83.55 E-value=15 Score=31.71 Aligned_cols=115 Identities=16% Similarity=0.100 Sum_probs=60.8
Q ss_pred eeeeEEecCHHHHHhhhccCCchhHHHHHH-HHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEE
Q 013482 284 VAETNFQMKVEDFYSLFFSDDTVNFIESFH-RKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFR 362 (442)
Q Consensus 284 v~e~~f~isv~~lF~llFsd~s~~f~~~~~-~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~ 362 (442)
-.+.+.+++++++|.+++.|-. +.+.+.+ ......++ -+.+ ..|..|.++|. -|.+.. .-.+++.
T Consensus 7 ~~ei~i~a~a~kvw~~~v~d~~-~l~pk~~P~~v~s~e~-eGdg----~~Gsir~~~~~------~g~~~~--~~kErl~ 72 (154)
T 2vjg_A 7 SLEITSSVSAEKIFSGIVLDVD-TVIPKAATGAYKSVEV-KGDG----GAGTVRIITLP------EGSPIT--TMTVRTD 72 (154)
T ss_dssp EEEEEESSCHHHHHHHHTTTHH-HHHHHHSTTTCSEEEE-ESSS----STTCEEEEECC------TTCSCC--EEEEEEE
T ss_pred EEEEEecCCHHHHHHhhhCCcc-ccchhhccCceeEEEE-eCCC----CCceEEEEEec------CCCCce--EEEEEEE
Confidence 4567889999999999888742 3334444 22333444 4443 23689999884 233222 3356776
Q ss_pred EecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 363 VYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 363 ~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
..++....+.-+..-.|++-..+=.....+.+.+.++ ++|.++.. +.|.+
T Consensus 73 ~iD~~~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~---ggs~v~wt--~~y~~ 122 (154)
T 2vjg_A 73 AVNKEALSYDSTVIDGDILLGFIESIETHMVVVPTAD---GGSITKTT--AIFHT 122 (154)
T ss_dssp EEETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTT---SCEEEEEE--EEEEE
T ss_pred EEeccCCEEEEEEEecCCCccceEEEEEEEEEEECCC---CcEEEEEE--EEEEE
Confidence 5554433333332223432111223444566666543 46765544 45554
No 11
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=82.76 E-value=19 Score=30.88 Aligned_cols=117 Identities=11% Similarity=0.051 Sum_probs=63.6
Q ss_pred eeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEEE
Q 013482 284 VAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFRV 363 (442)
Q Consensus 284 v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~~ 363 (442)
..+.+.+++++++|.++-.|-. +.+.+++......++.-+.|. .|..|.++|. . |.+... -++++..
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~-~~~pk~~~~i~s~~i~eG~g~----~Gsir~~~~~---~---G~~~~~--~kErl~~ 72 (155)
T 1icx_A 6 ENEQSSTVAPAKLYKALTKDSD-EIVPKVIEPIQSVEIVEGNGG----PGTIKKIIAI---H---DGHTSF--VLHKLDA 72 (155)
T ss_dssp EEEEEESSCHHHHHHHHTTTHH-HHHHHHSTTEEEEEEEESSSS----TTCEEEEEEE---S---SSSEEE--EEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcc-hhcchhhhhccEEEEEecCCC----CCeEEEEEEe---c---CCccee--EEEEEEE
Confidence 3567889999999996553532 345666644444455567662 2679999985 1 333222 3466664
Q ss_pred ecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 364 YRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 364 ~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
.++....+.-+..--|+.-..+=.....|.+.+.+. ++|.++..+ .|.+.
T Consensus 73 ~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~---~gs~v~w~~--~y~~~ 122 (155)
T 1icx_A 73 IDEANLTYNYSIIGGEGLDESLEKISYESKILPGPD---GGSIGKINV--KFHTK 122 (155)
T ss_dssp EEGGGTEEEEEEEEETTSCTTEEEEEEEEEEEECGG---GCEEEEEEE--EEEES
T ss_pred EeccCCEEEEEEEecCCCccceEEEEEEEEEEecCC---CCEEEEEEE--EEEEC
Confidence 544333333332222332112334566777777542 357655544 55543
No 12
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=81.97 E-value=17 Score=31.23 Aligned_cols=114 Identities=8% Similarity=0.093 Sum_probs=60.2
Q ss_pred eeeeeEEecCHHHHHhhhccCCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCC-CceeeeeEEEE
Q 013482 283 KVAETNFQMKVEDFYSLFFSDDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFG-AKFGSCKETQK 360 (442)
Q Consensus 283 ~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iG-pk~t~~~e~Q~ 360 (442)
...+.+.+++++++|.++.+|-. .++.+++- .....++.-+.|. .|..|.++|. . | .+ . .-.++
T Consensus 5 ~~~e~~i~a~a~kvw~~~v~d~~-~l~pk~~P~~i~s~~~~eGdgg----~Gsvr~~~~~-----~-g~~~-~--~~kEr 70 (155)
T 2flh_A 5 FNTQTELSVRLEALWAVLSKDFI-TVVPKVLPHIVKDVQLIEGDGG----VGTILIFNFL-----P-EVSP-S--YQREE 70 (155)
T ss_dssp EEEEEEESSCHHHHHHHHHTSCT-THHHHHCTTTEEEEEEEECSSS----TTCEEEEEEC-----T-TSSS-C--EEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcccc-cccchhccccceEEEEEcCCCC----CCeEEEEEee-----C-CCCC-c--EEEEE
Confidence 34567899999999998777754 44466552 2223344446652 3789999885 1 2 22 2 23466
Q ss_pred EEEecCCeEEEEEEEEeCC---CCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 361 FRVYRNSHLVIETSQEVHD---VPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 361 i~~~~~~~~vVe~~~~~~d---VPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
+...++....+.-+..--| .||.+ ....+.+.+.+. ++|.++ ..+.|.+.
T Consensus 71 l~~iD~~~~~~~y~iieg~~l~~~~~~---~~~~i~v~p~~~---ggs~v~--wt~~y~~~ 123 (155)
T 2flh_A 71 ITEFDESSHEIGLQVIEGGYLSQGLSY---YKTTFKLSEIEE---DKTLVN--VKISYDHD 123 (155)
T ss_dssp EEEEETTTTEEEEEEEEEGGGGTTCSE---EEEEEEEEEEET---TEEEEE--EEEEEEC-
T ss_pred EEEEeCCCCEEEEEEEeccccccCceE---EEEEEEEEECCC---CCEEEE--EEEEEEEC
Confidence 6555443222222211112 36665 334455555432 467554 44556543
No 13
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=80.94 E-value=14 Score=32.52 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=61.8
Q ss_pred eeeeeeEEecCHHHHHhhhccCCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEE
Q 013482 282 TKVAETNFQMKVEDFYSLFFSDDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQK 360 (442)
Q Consensus 282 ~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~ 360 (442)
+.-.+.+.+++++++|.++..|-. ..+.+.+- .....++.-+.+ ..|..|.++|. |+. -.-.++
T Consensus 10 ~~~~ei~i~apa~kvw~~~v~d~~-~l~pk~~P~~v~s~e~~eGdg----g~Gsir~~t~~-------g~~---~~~kEr 74 (168)
T 3rws_A 10 TSESEYVSSLSAEKLYRGIVEDGN-IIYPKALPRFIEKAETLEGDG----GPGTIKKLTFV-------GDF---GSTKQH 74 (168)
T ss_dssp EEEEEEEESSCHHHHHHHHHTSHH-HHHHHHSTTTEEEEEEEESSS----STTCEEEEEES-------SSS---CEEEEE
T ss_pred EEEEEEEecCCHHHHHHHHhcCcc-ccchhhCccccceEEEeeCCC----CCCeEEEEEEc-------CCC---eEEEEE
Confidence 345677899999999998756542 33344432 223334444543 23689999985 331 123477
Q ss_pred EEEecCCeEEEEEEEEeCCC----CCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 361 FRVYRNSHLVIETSQEVHDV----PYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 361 i~~~~~~~~vVe~~~~~~dV----PygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
+...++....+.-+..-.|+ ||.+ ....+.+.+.++ ++|.++.. +.|.+
T Consensus 75 l~~iD~~~~~~sY~iiegd~l~~~p~~~---y~~ti~v~p~~~---ggs~v~wt--~~y~~ 127 (168)
T 3rws_A 75 IDMVDRENCAYTYSVYEGIALSDQPLEK---IVFEFKLVPTPE---EGCIVKST--TKYYT 127 (168)
T ss_dssp EEEEETTTTEEEEEECSSCCBTTBCEEE---EEEEEEEEECTT---SCEEEEEE--EEEEE
T ss_pred EEEEcccCCEEEEEEEccCcccCcCceE---EEEEEEEEECCC---CceEEEEE--EEEEE
Confidence 76665544333333333344 4443 344566666543 46765544 45554
No 14
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=80.57 E-value=19 Score=30.96 Aligned_cols=117 Identities=16% Similarity=0.114 Sum_probs=63.4
Q ss_pred eeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEEE
Q 013482 284 VAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFRV 363 (442)
Q Consensus 284 v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~~ 363 (442)
..+.+.+++++++|.++-.|-. +.+.+++......++.-+.|. .|..|.++|. . |.+.. .-++++..
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~-~~~pk~~~~i~s~~i~eG~g~----~Gsir~~~~~---~---G~~~~--~~kErl~~ 72 (157)
T 1tw0_A 6 RDETSSSVAPAKLYKALTKDSD-TIAQKIDGPIQSIELVEGNGG----VGTIKKITAN---E---GDKTS--FVLQKVDA 72 (157)
T ss_dssp EEEEEESSCHHHHHHHHHHTGG-GGGGGSCSSEEEEEEEESSSS----TTCEEEEEEE---E---TTEEE--EEEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcc-hhhhhHHhhccEEEEEeCCCC----CCeEEEEEee---C---CCccc--eEEEEEEE
Confidence 4567889999999996553432 233444433334444556662 2679999986 1 33222 23566665
Q ss_pred ecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 364 YRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 364 ~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
.++....+.-+..--|+.-..+=.....|.+.+.+. ++|.++.. +.|.+.
T Consensus 73 ~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~---~gs~v~w~--~~y~~~ 122 (157)
T 1tw0_A 73 IDEANLGYDYSIVGGTGLPESLEKLSFETKVVAGSG---GGSISKVT--LKFHTK 122 (157)
T ss_dssp EETTTTEEEEEEEECTTSCTTEEEEEEEEEEEECSS---SSEEEEEE--EEEEES
T ss_pred EeccCCEEEEEEEecCCCccceEEEEEEEEEEecCC---CCEEEEEE--EEEEEC
Confidence 554443333333333432112334566777777543 36765554 455543
No 15
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=78.41 E-value=14 Score=30.21 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=59.8
Q ss_pred CCCCeeeEEEEEEEeecceeeeEEEEecceEEEEeccCCceeEEEEecccccccccccc--ccccCcEEEEEeC-CeEEE
Q 013482 77 PSEEVLVQDFNCAFQESILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKT--AGIFPNAIEIFAA-GKKYF 153 (442)
Q Consensus 77 p~~E~li~~f~Cal~~~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~--~~~~pnaI~I~t~-~~~~~ 153 (442)
..+|.|+....-.+++.- |.||++..+|-...+- +-.-.+.+++.+|...+-.+. +.+ -++|.-. +..|.
T Consensus 4 ~~~~~ll~v~~v~yKK~d---GtL~l~~d~i~W~p~~-~~~~~vs~~~~~I~~qq~SP~~k~KV---qLqi~l~~~~~~~ 76 (108)
T 1pfj_A 4 SSEEVLLIVKKVRQKKQD---GALYLMAERIAWAPEG-KDRFTISHMYADIKCQKISPEGKAKI---QLQLVLHAGDTTN 76 (108)
T ss_dssp SSCCEEEEESCCBCSSCB---CEEEEETTEEEEECSS-SSSCSEEEETTTCCCEEECCSSSSSC---EEEEECSSSCEEE
T ss_pred cchheeEEehhheeecCC---ceEEEEcceEEEccCC-CCCceEEEehhhhhcceeCCCCCccE---EEEEEEeCCCceE
Confidence 346777777777776532 9999999999877643 345667889999998654432 222 4677644 45555
Q ss_pred E--eecC----CHHHHHHHHHHHHHhcC
Q 013482 154 F--ASFL----SRDEAFKLITDGWLQHG 175 (442)
Q Consensus 154 F--~sF~----~rd~~~~li~~~w~~~~ 175 (442)
| ++=. .||..=++|.+++....
T Consensus 77 F~Ftn~~~a~~erd~VKd~L~~~l~~~k 104 (108)
T 1pfj_A 77 FHFSNESTAVKERDAVKDLLQQLLPKFK 104 (108)
T ss_dssp EECCCSSCTTHHHHHHHHHHHHHHHHHS
T ss_pred EEEcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 4422 36666677777766543
No 16
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=77.67 E-value=15 Score=31.64 Aligned_cols=115 Identities=13% Similarity=0.198 Sum_probs=61.5
Q ss_pred eeeeEEecCHHHHHhhhccCCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEE
Q 013482 284 VAETNFQMKVEDFYSLFFSDDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFR 362 (442)
Q Consensus 284 v~e~~f~isv~~lF~llFsd~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~ 362 (442)
..+.+++++++++|.++-.|-. +.+.+++- .....++.-+.|. .|..|.++|. . |.+... -++++.
T Consensus 6 ~~e~~i~ap~~~vw~~~~~d~~-~~~pk~~P~~i~s~~~~eGdgg----~Gsvr~~~~~---~---G~~~~~--~kErl~ 72 (159)
T 1e09_A 6 ESEFTSEIPPPRLFKAFVLDAD-NLVPKIAPQAIKHSEILEGDGG----PGTIKKITFG---E---GSQYGY--VKHKID 72 (159)
T ss_dssp EEEEEESSCHHHHHHHHTTTHH-HHHHHHCTTTEEEEEEEESSSS----TTCEEEEEEC---C---SSSCEE--EEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcc-ccchhhChhhccEEEEEeCCCC----CceEEEEEec---C---CCCceE--EEEEEE
Confidence 4567899999999996543532 34455552 3334444556662 2679999884 1 332222 346666
Q ss_pred EecCCeEEEEEEEEeCCCCCCC-ceEEEEEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 363 VYRNSHLVIETSQEVHDVPYGD-YFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 363 ~~~~~~~vVe~~~~~~dVPygD-~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
..++....+.-+..--|+ .++ +=.....|.+.+.+. ++|.++.. +.|.+
T Consensus 73 ~~D~~~~~~~y~iieG~~-~~~~~~~~~~~~~v~~~~~---~gs~v~wt--~~y~~ 122 (159)
T 1e09_A 73 SIDKENYSYSYTLIEGDA-LGDTLEKISYETKLVASPS---GGSIIKST--SHYHT 122 (159)
T ss_dssp EEETTTTEEEEEECCCTT-TGGGEEEEEEEEEECCCTT---SSEEEEEE--EEEEE
T ss_pred EEcCCCCEEEEEEEeccc-CcccceEEEEEEEEEecCC---CCEEEEEE--EEEEE
Confidence 555444344444332233 222 123455666666432 46765544 45554
No 17
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=76.20 E-value=11 Score=32.78 Aligned_cols=119 Identities=12% Similarity=0.182 Sum_probs=64.0
Q ss_pred ceeeeeeEEecCHHHHHhhhccCCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEE
Q 013482 281 YTKVAETNFQMKVEDFYSLFFSDDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQ 359 (442)
Q Consensus 281 ~~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q 359 (442)
.+...+.+++++++++|.++-++.. .+.+++- .....++.-+.|. ..|..|.++|.. |.+.. .-++
T Consensus 17 ~k~~~ev~i~apa~kvw~~~~~d~~--~lpk~~P~~i~s~~~~eGd~g---g~Gsir~~~~~~------gg~~~--~~kE 83 (166)
T 2i9y_A 17 GKLETDVEIKASADKFHHMFAGKPH--HVSKASPGNIQGCDLHEGDWG---TVGSIVFWNYVH------DGEAK--VAKE 83 (166)
T ss_dssp EEEEEEEEESSCHHHHHGGGSSCSS--CCCCSCSSCCSSCCCCSCCSC---STTCCCEEEEEE------TTEEE--EEEE
T ss_pred cEEEEEEEecCCHHHHHHHHhcccc--cccccccccceEEEEEcCCCC---CCCeEEEEEEec------CCCce--EEEE
Confidence 3455678999999999998776632 1223331 2233344445562 236799999852 33322 2356
Q ss_pred EEEEecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 360 KFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 360 ~i~~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
++...++....+.-+..--|+ ...+=.....|.+.+.+.+ ++|.+.. .+.|.+
T Consensus 84 rl~~iD~~~~~~~y~iieGd~-~~~~~~~~~ti~v~p~~~g--~gs~v~w--t~~ye~ 136 (166)
T 2i9y_A 84 RIEAVEPDKNLITFRVIEGDL-MKEYKSFLLTIQVTPKPGG--PGSIVHW--HLEYEK 136 (166)
T ss_dssp EEEEEETTTTEEEEEECCTTG-GGTEEEEEEEEEEEEEEET--TEEEEEE--EEEEEE
T ss_pred EEEEEeccCcEEEEEEEeCCC-CCCeeEEEEEEEEEECCCC--CCcEEEE--EEEEEE
Confidence 666555544344444333344 1223345667777775321 3676544 455654
No 18
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.33 E-value=25 Score=27.47 Aligned_cols=62 Identities=13% Similarity=-0.006 Sum_probs=41.7
Q ss_pred EEecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCCeEEEEeecCCHHHH
Q 013482 101 YLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFASFLSRDEA 163 (442)
Q Consensus 101 Yis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~~~~F~sF~~rd~~ 163 (442)
.|..+.|++|..--....+-.|++.++..|+......--++++.|.+.+..|+|. ..+.+++
T Consensus 30 vL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~-a~s~~e~ 91 (115)
T 2dn6_A 30 VLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEIS-ASDKKKK 91 (115)
T ss_dssp EECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEE-CSSHHHH
T ss_pred EEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEE-cCCHHHH
Confidence 3456778888654334567789999988877654322346799999988888884 3444443
No 19
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=67.11 E-value=9.3 Score=30.38 Aligned_cols=52 Identities=23% Similarity=0.326 Sum_probs=38.0
Q ss_pred EEecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCCeEEEEeec
Q 013482 101 YLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFASF 157 (442)
Q Consensus 101 Yis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~~~~F~sF 157 (442)
.|..+.|++|..--....+-.|++.++..|+... ++++.|.|.+..|+|..=
T Consensus 31 vL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~-----~~~F~i~~~~r~~~l~a~ 82 (115)
T 2cod_A 31 KFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG-----DNKFEVVTTQRTFVFRVE 82 (115)
T ss_dssp EECSSEEEEEESSCCSSCCCEEETTTEEEEEEET-----TTEEEEEESSCCEEEECS
T ss_pred EEECCEEEEEcCCCCcccCCEEECCcceEEEeCC-----CCEEEEEeCCcEEEEECC
Confidence 3456778887654333556689999998887654 679999998888888643
No 20
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=66.50 E-value=50 Score=29.46 Aligned_cols=120 Identities=13% Similarity=0.141 Sum_probs=63.3
Q ss_pred ccceeeeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEE
Q 013482 279 ECYTKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKET 358 (442)
Q Consensus 279 ~~~~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~ 358 (442)
..+...+..+++++++++|.+ ++|-. . .+.+.......++.-+. ...|..|.++|. -|.+... -+
T Consensus 33 ~~~~~~~~~~I~Apa~~vW~l-v~df~-~-~~~w~p~I~s~e~~eGd----g~vGsVR~~t~~------~G~p~~~--vk 97 (190)
T 3kl1_A 33 TTCTSLITQRIHAPASVVWPL-IRRFD-N-PERYKHFVKRCRLISGD----GDVGSVREVTVI------SGLPAST--ST 97 (190)
T ss_dssp TEEEEEEEEEESSCHHHHHHH-HHCTT-C-GGGTCSSEEEEEEEESS----SSTTCEEEEEEC------SSSSCEE--EE
T ss_pred CceeEEEEEEecCCHHHHHHH-HhCCC-C-hhHcccccCEEEEEcCC----CCCCeEEEEEec------CCCccce--EE
Confidence 445556778899999999995 44432 1 12222111122222222 112789999984 1322222 34
Q ss_pred EEEEEecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEE
Q 013482 359 QKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVA 414 (442)
Q Consensus 359 Q~i~~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~ 414 (442)
+++..+++....+.-+..-.++|+.+|-.+..-.-+..... ..++|.|.-.+.+.
T Consensus 98 ErL~~iD~~~~~~sY~iieG~~~~~~Y~s~~~v~~~~~~~~-~~~gt~V~Ws~~f~ 152 (190)
T 3kl1_A 98 ERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDS-GKVYTVVLESYTVD 152 (190)
T ss_dssp EEEEEEETTTTEEEEEEEEESSSCCSCEEEEEEEEEEC-CC-CCEEEEEEEEEEEE
T ss_pred EEEEEEeccCCEEEEEEEecCCccccEEEEEEEEecccccC-CCCcEEEEEEEEEE
Confidence 56665554432233332335788888877776665554211 12577777666554
No 21
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=61.05 E-value=71 Score=28.66 Aligned_cols=122 Identities=14% Similarity=0.104 Sum_probs=61.5
Q ss_pred eeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEecc-ceecCCCceeeEEEEEeeeeecCCCceee-eeEEEEEE
Q 013482 285 AETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTS-WHRHYEFGYSRDLSFQHPIKVYFGAKFGS-CKETQKFR 362 (442)
Q Consensus 285 ~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tp-W~~~~~~~~~R~vsY~~pl~~~iGpk~t~-~~e~Q~i~ 362 (442)
+..+++++++++|+.+|.|.. ... ..+.++.... -....+ .+ .+.|..-...+.+|-..+ ..-.....
T Consensus 70 ~~~~v~~~~~~v~~~~~~d~~--~r~-----~Wd~~~~~~~vle~~~~--~t-~I~~~~~~p~~~~~~~~RDfv~~r~~~ 139 (229)
T 1em2_A 70 LKTFLPCPAELVYQEVILQPE--RMV-----LWNKTVTACQILQRVED--NT-LISYDVSAGAAGGVVSPRDFVNVRRIE 139 (229)
T ss_dssp EEEEESSCHHHHHHHTTTCHH--HHT-----TTCTTEEEEEEEEEETT--TE-EEEEEEECCBTTTTBCCEEEEEEEEEE
T ss_pred EEEEecCCHHHHHHHHHhCcc--chh-----hcccccceEEEEEecCC--Ce-EEEEEEecCcCCCCcCCCeeEEEEEEE
Confidence 456789999999966776642 111 1122221111 111111 12 244442111112332221 11122222
Q ss_pred EecCCeEEEEEEEEeCCCCCC-CceEEE---EEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 363 VYRNSHLVIETSQEVHDVPYG-DYFRVE---GLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 363 ~~~~~~~vVe~~~~~~dVPyg-D~F~ve---~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
..++..+++..+..-+.+|-. .+=+++ ..|+|.+.+++ +++|+|.....+....
T Consensus 140 ~~~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~-~~~t~vt~~~~~Dp~G 197 (229)
T 1em2_A 140 RRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASN-PRVCTFVWILNTDLKG 197 (229)
T ss_dssp ECSSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSC-TTCEEEEEEECEECCS
T ss_pred EcCCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCC-CCcEEEEEEEEECCCC
Confidence 233434455666667778854 333444 57999987542 3689999999888865
No 22
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=59.53 E-value=39 Score=30.29 Aligned_cols=121 Identities=8% Similarity=0.026 Sum_probs=61.5
Q ss_pred eeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCC-CceeeEEEEEeeee---ecCCCceeeeeEEEE
Q 013482 285 AETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYE-FGYSRDLSFQHPIK---VYFGAKFGSCKETQK 360 (442)
Q Consensus 285 ~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~-~~~~R~vsY~~pl~---~~iGpk~t~~~e~Q~ 360 (442)
.+.+++++++++|++|+.|-. . |...|-.+......+. +..+ .+.|..-.. .++.|.-- |. ...
T Consensus 59 ~~~~v~~~~~~v~~~l~~d~~--~-------r~~Wd~~~~~~~vle~~~~~t-~I~y~~~~~~~~~~v~~RDf-v~-~r~ 126 (221)
T 3p0l_A 59 LEVVVDQPMERLYEELVERME--A-------MGEWNPNVKEIKVLQKIGKDT-FITHELAAEAAGNLVGPRDF-VS-VRC 126 (221)
T ss_dssp EEEEESSCHHHHHHHHTTTGG--G-------TTTSCTTCSEEEEEEECSSSE-EEEEEEECC---CCSCCEEE-EE-EEE
T ss_pred EEEEEcCCHHHHHHHHHhccc--h-------hhhcCcchheEEEEEecCCCe-EEEEEeeccccCCccCCceE-EE-EEE
Confidence 356789999999999986532 1 1111111111111010 1123 344443211 22333321 11 122
Q ss_pred EEEecCCeEEEEEEEEeCCCCC-CCceEEE---EEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 361 FRVYRNSHLVIETSQEVHDVPY-GDYFRVE---GLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 361 i~~~~~~~~vVe~~~~~~dVPy-gD~F~ve---~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
....++..+++..+...+.+|- .++-+++ ..|.|.+.++++ .+|+|.....+....+
T Consensus 127 ~~~~~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~-~~t~vt~~~~~Dp~G~ 187 (221)
T 3p0l_A 127 AKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSP-SKTKLTWLLSIDLKGW 187 (221)
T ss_dssp EEECSSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEE-EEEEEEEEECEECCSS
T ss_pred EEEcCCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCC-CcEEEEEEEEecCCCC
Confidence 2222333344545666677776 4444554 569999986421 3899999999887643
No 23
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=58.25 E-value=26 Score=28.05 Aligned_cols=56 Identities=13% Similarity=0.166 Sum_probs=39.7
Q ss_pred EEecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCCeEEEEeec
Q 013482 101 YLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFASF 157 (442)
Q Consensus 101 Yis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~~~~F~sF 157 (442)
.|..+.|++|..--....+-.|++.++..|..... .-.++++.|.+.+..|+|..-
T Consensus 40 vL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~-~~~~~~F~i~~~~r~~~l~a~ 95 (126)
T 1fao_A 40 TLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYS-QERVNCFCLVFPFRTFYLCAK 95 (126)
T ss_dssp EEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECS-SSSSSEEEEEETTEEEEEECS
T ss_pred EEECCEEEEeCCCCCCCceeEEEccceEEEEeccc-CCCCCEEEEEeCCcEEEEECC
Confidence 34567788886544445677899999987766432 224679999999888888653
No 24
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=57.12 E-value=83 Score=28.19 Aligned_cols=120 Identities=11% Similarity=0.076 Sum_probs=61.3
Q ss_pred eeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeec--CCCceeeeeEEEEEE
Q 013482 285 AETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVY--FGAKFGSCKETQKFR 362 (442)
Q Consensus 285 ~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~--iGpk~t~~~e~Q~i~ 362 (442)
+..+++++++++|++++..... .+ .+.++.-...-..-+ ..+.-+.|..+-..+ +.|.- .......+
T Consensus 71 ~~~~v~~~~~~v~~~l~d~~~r---~~-----Wd~~~~~~~vle~id-~~~~I~y~~~~~~~~~~v~~RD--fv~~r~~~ 139 (224)
T 1jss_A 71 AQGVMDDVVNNVIDHIRPGPWR---LD-----WDRLMTSLDVLEHFE-ENCCVMRYTTAGQLLNIISPRE--FVDFSYTV 139 (224)
T ss_dssp EEEEESSCHHHHHHHHSSSTTH---HH-----HCSSEEEEEEEEECS-TTEEEEEEEECCBTTTTBCCEE--EEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHhCcccc---cc-----cccceeeEEEEEEcC-CCeEEEEEEcccccCCCCCCCe--EEEEEEEE
Confidence 4578899999999999764421 11 122222211111111 223333333321111 23332 22122233
Q ss_pred EecCCeEEEEEEEEeCCCCCCCceEEE---EEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 363 VYRNSHLVIETSQEVHDVPYGDYFRVE---GLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 363 ~~~~~~~vVe~~~~~~dVPygD~F~ve---~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
..++..+++..+...++.| .++-+++ +.|.|++.++++ ++|+|...+.+....
T Consensus 140 ~~~~~~vi~~~Sv~hp~~~-~g~VR~~~~~~g~~i~p~~~~~-~~t~vt~~~~~Dp~G 195 (224)
T 1jss_A 140 GYEEGLLSCGVSVEWSETR-PEFVRGYNHPCGWFCVPLKDSP-SQSLLTGYIQTDLRG 195 (224)
T ss_dssp EETTEEEEEEEECCCCCCC-TTSEECEECSEEEEEEEETTEE-EEEEEEEEECEECCS
T ss_pred EcCCeEEEEEeeeecCCCC-CCCEEEEecccEEEEEEcCCCC-CceEEEEEEEeCCCC
Confidence 3344434444454456665 3666665 569999975422 489999998888864
No 25
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=57.02 E-value=19 Score=32.93 Aligned_cols=113 Identities=15% Similarity=0.191 Sum_probs=57.9
Q ss_pred CccceeeeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecC--CCceeeEEEEEeeeeecCCCceeee
Q 013482 278 PECYTKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHY--EFGYSRDLSFQHPIKVYFGAKFGSC 355 (442)
Q Consensus 278 ~~~~~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~--~~~~~R~vsY~~pl~~~iGpk~t~~ 355 (442)
|..+..++..+++++++++|.+ ++|-. . +..++. .+....+...+ .-|..|.++|.- |.+..
T Consensus 47 ~~~c~~~v~~~I~ApadkVW~l-v~dF~-~-l~~w~p-----~V~s~e~~eGd~g~vGsVR~lt~~~------G~p~~-- 110 (211)
T 3k3k_A 47 PGSCSSLHAQRIHAPPELVWSI-VRRFD-K-PQTYKH-----FIKSCSVEQNFEMRVGCTRDVIVIS------GLPAN-- 110 (211)
T ss_dssp TTEEEEEEEEEESSCHHHHHHH-HTCTT-C-GGGTCS-----SEEEEECCTTCCCCTTCEEEEEESS------SSSCE--
T ss_pred CCeEeEEEEEEEcCCHHHHHHH-HhCcC-C-hhHcCc-----cceEEEEecCCCCCCCcEEEEEecC------CCccc--
Confidence 4456667778999999999995 56532 1 222221 22222222111 226789888631 21222
Q ss_pred eEEEEEEEecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEe
Q 013482 356 KETQKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFS 416 (442)
Q Consensus 356 ~e~Q~i~~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~ 416 (442)
..++++..+++....+.-+..-.++||.+|- ..+.+.+.+. ++ |...+.|.
T Consensus 111 ~vkErL~~lDd~~~~~sYsIieg~lpv~~Y~---sti~V~p~~~---gg----V~Wt~~fe 161 (211)
T 3k3k_A 111 TSTERLDILDDERRVTGFSIIGGEHRLTNYK---SVTTVHRFEK---EN----RIWTVVLE 161 (211)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEETTGGGTCE---EEEEEEEEEE---TT----EEEEEEEE
T ss_pred eEEEEEEEEeccCCEEEEEEeecCcceeEEE---EEEEEEECCC---CC----EEEEEEEE
Confidence 3346665555433222222222478998865 3344555543 22 55666665
No 26
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=55.09 E-value=70 Score=26.75 Aligned_cols=100 Identities=10% Similarity=0.105 Sum_probs=53.3
Q ss_pred eeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEEEe
Q 013482 285 AETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFRVY 364 (442)
Q Consensus 285 ~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~~~ 364 (442)
.+.+++++++++|.+ ++|-. . +.+++-.. ....+. .||..|.++|. -|. .-.+++..+
T Consensus 6 ~si~I~Ap~~~VW~~-l~d~~-~-~~~w~p~v-----~~~~~~---~GG~vR~~~~~------~G~-----~~~Erl~~~ 63 (146)
T 3f08_A 6 TSMEIFGSTEQVWQL-IGGFN-S-LPDWLPYI-----PSSKLT---EGGRVRHLANP------DGE-----TIIERLEVF 63 (146)
T ss_dssp EEEEESSCHHHHHHH-HCSTT-C-HHHHCTTC-----CEEEEE---GGGTEEEEECT------TSC-----EEEEEEEEE
T ss_pred EEEEEeCCHHHHHHH-Hhccc-c-HHHhCCCe-----EEEEEe---CCCeEEEEEeC------CCC-----EEEEEEEEE
Confidence 356889999999995 66542 2 34443211 111222 13778877641 121 234555545
Q ss_pred cC--CeEEEEEEEEeCCCCCCCceEEEEEEEEEe-cCCCCCCceEEEEEEEEE
Q 013482 365 RN--SHLVIETSQEVHDVPYGDYFRVEGLWDVMR-DDGGSKEGCILRVYVNVA 414 (442)
Q Consensus 365 ~~--~~~vVe~~~~~~dVPygD~F~ve~r~~i~~-~~~~~~~~c~l~V~~~V~ 414 (442)
+. ..|..... -.+.|+.+ ....|.+.+ .++ ++|+|.-.+.+.
T Consensus 64 D~~~~~~~y~iv--~g~~~~~~---~~~~~~v~p~~~~---~gt~v~w~~~~~ 108 (146)
T 3f08_A 64 NDKERYYTYSIM--NAPFPVTN---YLSTIQVKEGTES---NTSLVEWSGTFT 108 (146)
T ss_dssp ETTTTEEEEEEE--ECSSSEEE---EEEEEEEEECSST---TCEEEEEEEEEE
T ss_pred eCCCCEEEEEEe--cCCCceeE---EEEEEEEEEecCC---CcEEEEEEEEEE
Confidence 43 33322222 13567543 455777877 332 578887776665
No 27
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=54.91 E-value=33 Score=31.22 Aligned_cols=103 Identities=11% Similarity=0.074 Sum_probs=54.4
Q ss_pred CccceeeeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeE
Q 013482 278 PECYTKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKE 357 (442)
Q Consensus 278 ~~~~~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e 357 (442)
|..+..++..+++++++++|.++ +|-. . +..++......++.-+.| ..-|..|.++|.. |.+.. .-
T Consensus 51 ~~~c~~~v~~~I~ApadkVW~lv-~Df~-~-l~~w~p~V~s~e~~eGd~---g~vGsVR~lt~~~------G~p~~--~v 116 (208)
T 3jrs_A 51 NGRCSSLLAQRIHAPPETVWSVV-RRFD-R-PQIYKHFIKSCNVSEDFE---MRVGCTRDVNVIS------GLPAN--TS 116 (208)
T ss_dssp TTEEEEEEEEEESSCHHHHHHHH-TCTT-C-GGGTCTTEEEEECCTTCC---CSTTCEEEEEECT------TSSCC--EE
T ss_pred CCeEeEEEEEEEeCCHHHHHHHH-hCcC-C-hhHccccceEEEEecCCC---CCCCeEEEEEecC------CCccc--eE
Confidence 45566677789999999999965 4432 1 233332111112211222 1236799998742 22222 23
Q ss_pred EEEEEEecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEec
Q 013482 358 TQKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRD 397 (442)
Q Consensus 358 ~Q~i~~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~ 397 (442)
++++..+++....+.-+..-.++|+.+|-. ...+.+.
T Consensus 117 kErL~~lDde~~~~sYsIieG~lpv~~Y~s---ti~V~p~ 153 (208)
T 3jrs_A 117 RERLDLLDDDRRVTGFSITGGEHRLRNYKS---VTTVHRF 153 (208)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSSCTTCEE---EEEEEEE
T ss_pred EEEEEEEeccCCEEEEEEeeCCcceeeEEE---EEEEEEc
Confidence 466665655332222232336799999864 3445553
No 28
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=52.24 E-value=68 Score=29.32 Aligned_cols=49 Identities=8% Similarity=0.029 Sum_probs=34.2
Q ss_pred CCeEE-EEEEEEeCCCCCCCceE---EEEEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 366 NSHLV-IETSQEVHDVPYGDYFR---VEGLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 366 ~~~~v-Ve~~~~~~dVPygD~F~---ve~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
++.|+ +..+..-+++|-.++=+ ..+.|.|++.++ ++|+|.....+....
T Consensus 148 ~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~---~~t~vt~~~~~Dp~G 200 (237)
T 2pso_A 148 KGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGS---GKSRLTHICRIDLKG 200 (237)
T ss_dssp GGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECST---TCEEEEEEEEECCSS
T ss_pred CCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCC---CCEEEEEEEEeCCCC
Confidence 34454 45566666788664333 457899999864 689999999998864
No 29
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=51.07 E-value=1.4e+02 Score=26.84 Aligned_cols=114 Identities=12% Similarity=0.139 Sum_probs=61.6
Q ss_pred eeeeeEEecCHHHHHhhhcc-CCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEE
Q 013482 283 KVAETNFQMKVEDFYSLFFS-DDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQK 360 (442)
Q Consensus 283 ~v~e~~f~isv~~lF~llFs-d~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~ 360 (442)
...+.+++++++++|.++.+ |.. .++.+++- .....++. +.|. .|..|.++|. =|+.. ..-+++
T Consensus 31 ~~~eveI~apa~kvW~~~v~~df~-~l~pk~~P~~i~s~e~~-GdGg----~GsIR~lt~~------~G~~~--~~vkEr 96 (201)
T 2vq5_A 31 IHHELEVAASADDIWTVYSWPGLA-KHLPDLLPGAFEKLEII-GDGG----VGTILDMTFV------PGEFP--HEYKEK 96 (201)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGGG-GGHHHHSTTSCSEEEEE-SSSS----TTCEEEEECC------TTCSS--CEEEEE
T ss_pred EEEEEEecCCHHHHHhhhhcCCcc-cchhhhCcccceEEEEe-cCCC----CCeEEEEEec------CCCcc--cEEEEE
Confidence 34567889999999998766 543 45556553 23445666 7773 2789999885 13222 233566
Q ss_pred EEEecCCeEEEEEEEEeCC---CCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 361 FRVYRNSHLVIETSQEVHD---VPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 361 i~~~~~~~~vVe~~~~~~d---VPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
+...++....+.-+..--| .||.+ |... ..+.+.+. ++|.+ ...+.|.+.
T Consensus 97 le~iDde~~~~sYsiieGd~l~~~~~~-y~~t--ikv~p~~d---ggs~v--kWt~~ye~~ 149 (201)
T 2vq5_A 97 FILVDNEHRLKKVQMIEGGYLDLGVTY-YMDT--IHVVPTGK---DSCVI--KSSTEYHVK 149 (201)
T ss_dssp EEEEETTTTEEEEEEEEEGGGGTTEEE-EEEE--EEEEEEET---TEEEE--EEEEEEEEC
T ss_pred EEEEchhhCEEEEEEEecCccccceeE-EEEE--EEEEECCC---CCeEE--EEEEEEEEC
Confidence 6655554322222222122 34544 3333 33444432 46764 445566554
No 30
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=50.45 E-value=1.2e+02 Score=26.13 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=58.0
Q ss_pred eeeeeeEEecCHHHHHhhhccCCchhHHHHHHH-HcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEE
Q 013482 282 TKVAETNFQMKVEDFYSLFFSDDTVNFIESFHR-KCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQK 360 (442)
Q Consensus 282 ~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~-~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~ 360 (442)
+.-.+.+.+++++++|.++..|-. ..+.+.+- .....++.-+.. ..|..|.++|. -|.+. ..-+++
T Consensus 11 ~~~~ev~i~a~a~kvw~~~v~d~~-~l~pk~~P~~v~s~e~~eGdg----~~Gsir~~~~~------~g~~~--~~~kEr 77 (165)
T 3ie5_A 11 TIVKEEESPIAPHRLFKALVLERH-QVLVKAQPHVFKSGEIIEGDG----GVGTVTKITFV------DGHPL--TYMLHK 77 (165)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHH-HHHHHHCTTTEEEEEEEESSS----STTCEEEEEEC------TTSSC--CEEEEE
T ss_pred EEEEEEEecCCHHHHHHHhcCCcc-ccchhhCCcccceEEEecCCC----CCCeEEEEEec------CCCCC--ceEEEE
Confidence 344677899999999998766642 22234332 122233333431 23689999984 13322 234577
Q ss_pred EEEecCCeEEEEEEEEeCCC---CCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEeee
Q 013482 361 FRVYRNSHLVIETSQEVHDV---PYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSKK 418 (442)
Q Consensus 361 i~~~~~~~~vVe~~~~~~dV---PygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~Ks 418 (442)
+...++....+.-+..--|+ +|. .|..+.+.. . . + ++|.++.. +.|.+.
T Consensus 78 l~~iD~~~~~~~Y~iieG~~l~~~~~-~y~~~i~v~-~-~-~---ggs~vkwt--~~y~~~ 129 (165)
T 3ie5_A 78 FDEIDAANFYCKYTLFEGDVLRDNIE-KVVYEVKLE-A-V-G---GGSKGKIT--VTYHPK 129 (165)
T ss_dssp EEEEEGGGTEEEEEEEEEGGGTTTEE-EEEEEEEEE-E-E-T---TEEEEEEE--EEEEEC
T ss_pred EEEEchhcCEEEEEEecCCCCccceE-EEEEEEEEE-e-C-C---CceEEEEE--EEEEEC
Confidence 76555443222222222232 243 344455554 2 2 2 47765544 455543
No 31
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=47.91 E-value=3.8 Score=43.15 Aligned_cols=41 Identities=10% Similarity=0.128 Sum_probs=0.0
Q ss_pred eeeeEEEEecceEEEEeccCCceeEEEEecccccccccccc
Q 013482 95 LLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKT 135 (442)
Q Consensus 95 ~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~ 135 (442)
.-.|++|+|.+.|||.-..-..+..+.|++++|..++....
T Consensus 42 ~q~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~ag 82 (566)
T 1w7p_D 42 RQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSG 82 (566)
T ss_dssp -----------------------------------------
T ss_pred ccCceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeec
Confidence 45799999999999976655445678999999999998754
No 32
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=47.59 E-value=84 Score=28.10 Aligned_cols=104 Identities=8% Similarity=0.089 Sum_probs=56.6
Q ss_pred cceeeeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEe-ccceecCCCceeeEEEEEeeeeecCCCceeeeeEE
Q 013482 280 CYTKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKC-TSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKET 358 (442)
Q Consensus 280 ~~~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~-tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~ 358 (442)
-+.-++..+++++++++|.++=.=+. ++.++.......+.- +.+.....-|..|.++|.- |-+.+ ..+
T Consensus 29 ~c~s~~~~~I~Ap~d~VWalVrdF~~---p~~w~p~V~s~~~~e~Gdg~~~~~vGsVR~ltl~~------G~P~~--~i~ 97 (189)
T 3oji_A 29 TCTSLIAHRVDAPAHAIWRFVRDFAN---PNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVVS------GLPAS--TSV 97 (189)
T ss_dssp EEEEEEEEEESSCHHHHHHHHSCTTC---GGGTCTTEEEEEECCC----CCCSTTCEEEEEECS------SSSBS--EEE
T ss_pred ccceeEEEEEcCCHHHHHHHHhCCCC---hhhCccccceEEEEecCCCCccCCCCcEEEEEecC------CCcCc--eEE
Confidence 35556778999999999995532221 233333222333332 4432222247899999842 21122 335
Q ss_pred EEEEEecCCeEEEEEEEEeCCCCCCCceEEEEEEEE
Q 013482 359 QKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDV 394 (442)
Q Consensus 359 Q~i~~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i 394 (442)
+++..+++...++.-+..-.++|+.+|-.+..---+
T Consensus 98 ErL~~lDde~~~~sY~Iieg~~pv~nY~StitV~~~ 133 (189)
T 3oji_A 98 EILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEF 133 (189)
T ss_dssp EEEEEEETTTTEEEEEEEECSBSSCSCEEEEEEEEE
T ss_pred EEEEEEeccCCEEEEEEEecCCccccEEEEEEEEec
Confidence 777666654433333333467899999888754444
No 33
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.89 E-value=23 Score=29.91 Aligned_cols=54 Identities=20% Similarity=0.293 Sum_probs=39.0
Q ss_pred ecceEEEEeccCCceeEEEEeccccccccccccccc-----cCcEEEEEeCCeEEEEee
Q 013482 103 FVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGI-----FPNAIEIFAAGKKYFFAS 156 (442)
Q Consensus 103 s~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~-----~pnaI~I~t~~~~~~F~s 156 (442)
..+-|+.|-+=-+.+.-..|||.+|..|+-.+...+ .|+..+|.|.+..|+-..
T Consensus 32 D~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge 90 (129)
T 2d9z_A 32 DSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGE 90 (129)
T ss_dssp ESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECB
T ss_pred cCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEECCEEEEEcc
Confidence 455566665444555556799999999999876554 457899999888888654
No 34
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=46.47 E-value=94 Score=24.06 Aligned_cols=64 Identities=19% Similarity=0.202 Sum_probs=39.7
Q ss_pred cceEEEEeccCCceeEEEEeccccccccccccc------cccCcEEEEEeCCeEEEEeecCCHHHHHHHHH
Q 013482 104 VHFICFYSNIFGFETKKIIPFYEVTAVRRAKTA------GIFPNAIEIFAAGKKYFFASFLSRDEAFKLIT 168 (442)
Q Consensus 104 ~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~------~~~pnaI~I~t~~~~~~F~sF~~rd~~~~li~ 168 (442)
.+.|++|..--....+-.|++.++..|...... .--++++.|.|.+..|+|. -.+.+++-.=|.
T Consensus 35 ~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~-a~s~~e~~~Wi~ 104 (117)
T 1v5u_A 35 KHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFC-AQDVPSAQQWVD 104 (117)
T ss_dssp TTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEE-CSSHHHHHHHHH
T ss_pred CCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEE-CCCHHHHHHHHH
Confidence 567788765433345668999998877643211 1123689999998889886 345554433333
No 35
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=44.71 E-value=51 Score=26.02 Aligned_cols=55 Identities=22% Similarity=0.367 Sum_probs=37.2
Q ss_pred EecceEEEEeccCCceeEEEEecccccccccccc--ccccCcEEEEEeCCeEEEEee
Q 013482 102 LFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKT--AGIFPNAIEIFAAGKKYFFAS 156 (442)
Q Consensus 102 is~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~--~~~~pnaI~I~t~~~~~~F~s 156 (442)
|..+.|++|..--....+-.|++.++..|..... ..--+++++|.|.+..|+|..
T Consensus 37 L~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a 93 (125)
T 1eaz_A 37 LDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQA 93 (125)
T ss_dssp ECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEEC
T ss_pred EeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEc
Confidence 4566788876543344567899999887765321 112467999999888888854
No 36
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=44.59 E-value=21 Score=31.58 Aligned_cols=46 Identities=11% Similarity=0.132 Sum_probs=35.1
Q ss_pred EEEEEeecceeeeEEEEecceEEEEeccCCceeEEEEecccccc--ccccc
Q 013482 86 FNCAFQESILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTA--VRRAK 134 (442)
Q Consensus 86 f~Cal~~~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~--I~k~~ 134 (442)
..+.+....+-.|.||||++.|-+.+. ...-+.|||..|.- |.+..
T Consensus 32 v~~vl~~~~~g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~ 79 (171)
T 1zyi_A 32 TEAVLNGKGLGTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDL 79 (171)
T ss_dssp EEEEBTTBCCCEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSC
T ss_pred EEEEECCCccCceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCC
Confidence 556665555578999999999999887 35678999998875 65554
No 37
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=44.01 E-value=21 Score=29.97 Aligned_cols=53 Identities=26% Similarity=0.363 Sum_probs=38.0
Q ss_pred ecceEEEEeccCCceeEEEEeccccccccccccccc-----cCcEEEEEeCCeEEEEe
Q 013482 103 FVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGI-----FPNAIEIFAAGKKYFFA 155 (442)
Q Consensus 103 s~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~-----~pnaI~I~t~~~~~~F~ 155 (442)
..+-|+.|-+=-+.+.-..|||.||..|+-.+...+ .|+..+|.|.+..|+-.
T Consensus 32 D~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg 89 (125)
T 2coa_A 32 DCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVG 89 (125)
T ss_dssp CSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEE
T ss_pred cCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEeCCeEEEEc
Confidence 455566665444555567799999999998865443 56889999987776654
No 38
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=43.29 E-value=1.1e+02 Score=23.56 Aligned_cols=62 Identities=21% Similarity=0.194 Sum_probs=39.1
Q ss_pred EEecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCC-eEEEEeecCCHHHH
Q 013482 101 YLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAG-KKYFFASFLSRDEA 163 (442)
Q Consensus 101 Yis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~-~~~~F~sF~~rd~~ 163 (442)
.|..+.|++|..--...-+-.|++..+..+.......--+++++|.+.+ ..|+|.. .+.++.
T Consensus 27 vL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a-~s~~e~ 89 (113)
T 1pls_A 27 VLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQA-AFLEER 89 (113)
T ss_dssp EEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEEC-SSHHHH
T ss_pred EEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEEC-CCHHHH
Confidence 3466778887654334556789999988865222222346799999876 6777754 344433
No 39
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=41.88 E-value=1.1e+02 Score=24.71 Aligned_cols=57 Identities=9% Similarity=0.187 Sum_probs=38.9
Q ss_pred EEEEecceEEEEeccCC----ceeEEEEeccccccccccccccccCcEEEEEeCCeEEEEee
Q 013482 99 HMYLFVHFICFYSNIFG----FETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFAS 156 (442)
Q Consensus 99 rlYis~~~icF~S~~~g----~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~~~~F~s 156 (442)
++|+.++.|-.-+.... ......+|+.+|.-+.-. ...-+.|++.|.+..+.++|..
T Consensus 29 ~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~-d~~~~~n~f~i~~~~~s~~~~a 89 (113)
T 1zc3_B 29 HGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVK-DNPPMKDMFKLLMFPESRIFQA 89 (113)
T ss_dssp EEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEEC-CBTTBSSEEEEEETTEEEEEEC
T ss_pred EEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECC-CCcccceEEEEEeCCceEEEEc
Confidence 47888888777654322 244556899996555433 3345689999999888888755
No 40
>2gcl_A Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region; chromaint, double PH domain, yfact, DNA replication, RPA; 2.21A {Saccharomyces cerevisiae} SCOP: b.55.1.10 PDB: 2gcj_A
Probab=41.55 E-value=27 Score=32.98 Aligned_cols=78 Identities=22% Similarity=0.428 Sum_probs=53.1
Q ss_pred EEEEEEeecceeeeEEEEecceEEEEeccCCceeEEEEeccccccccccc------cccccCcEEEEEeC-C-eEEEEee
Q 013482 85 DFNCAFQESILLQGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAK------TAGIFPNAIEIFAA-G-KKYFFAS 156 (442)
Q Consensus 85 ~f~Cal~~~i~~~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~------~~~~~pnaI~I~t~-~-~~~~F~s 156 (442)
...|++..+ .|-||.-++.+-|- .+-.+.|+++||.+|+=.. +.+-| -+.|.++ + .+|.|++
T Consensus 166 ~Vkcs~ka~---eG~LypL~~gflF~-----~KP~~~i~~~~I~sV~fsrvg~~~~~~rTF--dl~v~~k~g~~~~~Fs~ 235 (261)
T 2gcl_A 166 AVSCSFKAN---EGYLYPLDNAFFFL-----TKPTLYIPFSDVSMVNISRAGQTSTSSRTF--DLEVVLRSNRGSTTFAN 235 (261)
T ss_dssp CEEEEETTE---EEEEEECSSEEEEE-----SSSCEEEEGGGEEEEEEEC--------CEE--EEEEEESTTCCEEEEEE
T ss_pred eEEEeccCC---ceEEEEecCceEEe-----eCCcEEEEhhHeeEEEEEeccCCcccCceE--EEEEEEcCCCccEEEcc
Confidence 567877643 59999999988773 3456899999999998553 12334 4677775 3 6999977
Q ss_pred cCCHHHHHHHHHHHHHhc
Q 013482 157 FLSRDEAFKLITDGWLQH 174 (442)
Q Consensus 157 F~~rd~~~~li~~~w~~~ 174 (442)
. +|++ |..|.+..+..
T Consensus 236 I-dreE-~~~L~~ylk~k 251 (261)
T 2gcl_A 236 I-SKEE-QQLLEQFLKSK 251 (261)
T ss_dssp E-EGGG-HHHHHHHHHHT
T ss_pred c-CHHH-HHHHHHHHHHc
Confidence 6 5554 45555555543
No 41
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), saccharomyces cerevisi structural genomics, PSI-2; 1.70A {Saccharomyces cerevisiae}
Probab=38.73 E-value=1.6e+02 Score=26.33 Aligned_cols=87 Identities=14% Similarity=0.219 Sum_probs=61.2
Q ss_pred EEEEEEEeecceeeeEEEEecceEEEEec-cCC-----ceeEEEEeccccccccccccccccCcEEEEEeC-CeEEEEee
Q 013482 84 QDFNCAFQESILLQGHMYLFVHFICFYSN-IFG-----FETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAA-GKKYFFAS 156 (442)
Q Consensus 84 ~~f~Cal~~~i~~~GrlYis~~~icF~S~-~~g-----~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~-~~~~~F~s 156 (442)
.+|.=.+.......|||=|++.-|.|.+. -=| .+..+.|+-.||..++=.+.++ -..+.|.++ +..|.|..
T Consensus 24 ~~F~nI~l~~s~~~G~lkla~~glgWK~~~~tG~~~~~~~k~~~i~~sdI~~a~W~r~~r--g~~LrI~~K~g~~~~fdG 101 (191)
T 3f5r_A 24 TDFDRIYLNQSKFSGRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGCR--GYDLKINTKNQGVIQLDG 101 (191)
T ss_dssp EEEEEEEETTCSSCEEEEEETTEEEEEECCSSTTTHHHHCCCEEEEGGGEEEEEEEECSS--SEEEEEEESSSCEEEEEE
T ss_pred eeECcEeecCCCcccEEEEcCCceEEeecCCCCccccccCceEEEcHHHcCeEEEEEccC--CcEEEEEECCCceEEecC
Confidence 34553333335568999999999999976 333 1155889999999998776542 347888876 47899999
Q ss_pred cCCHHHHHHHHHHHHHhc
Q 013482 157 FLSRDEAFKLITDGWLQH 174 (442)
Q Consensus 157 F~~rd~~~~li~~~w~~~ 174 (442)
|...| |+.|.+..+..
T Consensus 102 F~~~D--~~~L~~~fk~~ 117 (191)
T 3f5r_A 102 FSQDD--YNLIKNDFHRR 117 (191)
T ss_dssp ECGGG--HHHHHHHHHHH
T ss_pred CCHHH--HHHHHHHHHHH
Confidence 96554 66677766654
No 42
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=38.12 E-value=1.9e+02 Score=24.70 Aligned_cols=47 Identities=13% Similarity=0.295 Sum_probs=30.9
Q ss_pred CCeEEEEEEEEeCCCCCCCce----EEEEEEEEEecCCCCCCceEEEEEEEEEEe
Q 013482 366 NSHLVIETSQEVHDVPYGDYF----RVEGLWDVMRDDGGSKEGCILRVYVNVAFS 416 (442)
Q Consensus 366 ~~~~vVe~~~~~~dVPygD~F----~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~ 416 (442)
++.++|......+.+|=..-| .....|.|++ ++ ++|+|.....+.+.
T Consensus 100 ~g~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~---~~t~vt~~~~~dp~ 150 (189)
T 3qsz_A 100 DGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DA---DGVDVTYQMHASPG 150 (189)
T ss_dssp TSCEEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CS---SSEEEEEEEEECSC
T ss_pred CCeEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CC---CeEEEEEEEEeCCC
Confidence 345655555444555543322 3458899999 54 58999999999875
No 43
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=37.55 E-value=1.7e+02 Score=24.03 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=57.7
Q ss_pred eeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEE-
Q 013482 284 VAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFR- 362 (442)
Q Consensus 284 v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~- 362 (442)
-.+.+++.|++++|.++ .|- .-+..++- ++..+.. ..++. |..-+...+|+-.......-++.
T Consensus 6 ~~~~~i~ap~e~Vw~~l-~D~--e~~~~w~p--~~~~~~~-----~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~ 69 (162)
T 2pcs_A 6 NGSIELKGTVEEVWSKL-MDP--SILSKCIM--GCKSLEL-----IGEDK------YKADLQIGIAAVKGKYDAIIEVTD 69 (162)
T ss_dssp EEEEEEESCHHHHHHHH-TCH--HHHHHHST--TEEEEEE-----EETTE------EEEEEEECCGGGCEEEEEEEEEEE
T ss_pred eeEEEecCCHHHHHHHh-cCH--HHHHhhCC--CceEeEE-----eCCCe------EEEEEEEEeeeEEEEEEEEEEEEe
Confidence 45678999999999954 553 33444432 2222221 11222 22222223344322222222222
Q ss_pred EecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEe
Q 013482 363 VYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFS 416 (442)
Q Consensus 363 ~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~ 416 (442)
......|++.....- + +..+.....|.++..++ ++|+|.....+.+.
T Consensus 70 ~~~~~~~~~~~~~~~-~---~~~~~~~~~~~l~~~~~---~gT~v~~~~~~~~~ 116 (162)
T 2pcs_A 70 IKPPYHYKLLVNGEG-G---PGFVNAEGVIDLTPIND---ECTQLTYTYSAEVG 116 (162)
T ss_dssp EETTTEEEEEEEEEE-T---TEEEEEEEEEEEEESSS---SEEEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEecC-C---CccEEEEEEEEEEecCC---CcEEEEEEEEEEEC
Confidence 234566666554332 1 33345788899988543 47999999888875
No 44
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=30.84 E-value=2.7e+02 Score=24.38 Aligned_cols=116 Identities=11% Similarity=0.144 Sum_probs=56.6
Q ss_pred CccceeeeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEecccee-cCCCceeeEEEEEeeeeecCCCceeeee
Q 013482 278 PECYTKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHR-HYEFGYSRDLSFQHPIKVYFGAKFGSCK 356 (442)
Q Consensus 278 ~~~~~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~-~~~~~~~R~vsY~~pl~~~iGpk~t~~~ 356 (442)
|..+...+..+++++++++|.+ ++|-. . +..++- .+......- ...-|..|.++|. . |.+.. .
T Consensus 24 ~~~~~~~v~~~I~Apa~~VW~~-v~df~-~-l~~w~P-----~V~s~~~eG~~ggvGsvR~lt~~---~---G~p~~--~ 87 (183)
T 3rt2_A 24 ESQCSSTLVKHIKAPLHLVWSI-VRRFD-E-PQKYKP-----FISRCVVQGKKLEVGSVREVDLK---S---GLPAT--K 87 (183)
T ss_dssp TTEEEEEEEEEESSCHHHHHHH-HTCTT-C-GGGTCT-----TEEEEEESSSCCCTTCEEEEEEC---C---SSTTC--E
T ss_pred CCceEEEEEEEEeCCHHHHHHH-HhCcC-c-hhhcCc-----cceEEEeeCCCCCCCcEEEEEeC---C---CCccc--e
Confidence 3455667778999999999996 56532 1 222221 121111111 1123689999874 1 21112 2
Q ss_pred EEEEEEEecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecC-CCCCCceEEEEEEEE
Q 013482 357 ETQKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDD-GGSKEGCILRVYVNV 413 (442)
Q Consensus 357 e~Q~i~~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~-~~~~~~c~l~V~~~V 413 (442)
-++++..+++....+.-+..-.++||.+|-.+ +.+...+ .+ ..+|.|.=.+.+
T Consensus 88 vkErL~~~D~~~~~~sY~Iieg~lp~~~y~at---i~v~p~~~dG-~~gt~V~Ws~~f 141 (183)
T 3rt2_A 88 STEVLEILDDNEHILGIRIVGGDHRLKNYSST---ISLHSETIDG-KTGTLAIESFVV 141 (183)
T ss_dssp EEEEEEEEETTTTEEEEEEEEESCSCTTCEEE---EEEEEEEETT-EEEEEEEEEEEE
T ss_pred EEEEEEEEECCCCEEEEEEecCCcceeEEEEE---EEEEEecCCC-CCCEEEEEEEEE
Confidence 34666555543211111111127899886443 3344432 21 015766555444
No 45
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=28.39 E-value=2.4e+02 Score=22.91 Aligned_cols=104 Identities=13% Similarity=0.163 Sum_probs=50.4
Q ss_pred eeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEEEe
Q 013482 285 AETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFRVY 364 (442)
Q Consensus 285 ~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~~~ 364 (442)
.+.+++++++++|.++ +|-. . +.+++-.....++.-+.+ ..-|..|.+++ ..|. ...+++..+
T Consensus 6 ~si~I~ap~e~Vw~~l-~d~~-~-~~~w~p~v~~~~~~~g~~---~~~G~~r~~~~------~~G~-----~~~e~i~~~ 68 (151)
T 2le1_A 6 RSVEVAAPAADVWTLV-GDFS-A-IHRWHPQVSAPTLRGASP---HTPGAERVFGA------GTEE-----ELVERLVER 68 (151)
T ss_dssp EEEEESSCHHHHHHHH-TTSG-G-GGGTCTTCCCEEEESSCT---TSTTCEEEESS------SSSS-----CEEEEEEEE
T ss_pred EEEEecCCHHHHHHHH-hCcC-c-HHHhcCCceEEEEECCCC---CCCCeEEEEEe------CCCC-----EEEEEEEEE
Confidence 4568899999999975 5532 1 222222111112211111 11245665543 1232 233455444
Q ss_pred c--CCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEE
Q 013482 365 R--NSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNV 413 (442)
Q Consensus 365 ~--~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V 413 (442)
+ +..|...... .++|+.+ ....|.+...++ ++|+|.....+
T Consensus 69 d~~~~~~~~~~~~--g~~~~~~---~~~~~~l~~~~~---~gt~v~w~~~f 111 (151)
T 2le1_A 69 DESARRLVYTMPD--PPFPITN---HRAVLEVVPRDD---RHCTVVWTAMF 111 (151)
T ss_dssp ETTTTEEEEEEEE--CSSSEEE---EEEEEEEEESSS---SCEEEEEEEEE
T ss_pred eCCCCEEEEEEec--CCCCcee---EEEEEEEEECCC---CcEEEEEEEEE
Confidence 3 3444333332 2456433 466788887533 47887776543
No 46
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.80 E-value=1.1e+02 Score=24.21 Aligned_cols=56 Identities=7% Similarity=-0.014 Sum_probs=37.0
Q ss_pred ecc--eEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCCeEEEEeecCCHHH
Q 013482 103 FVH--FICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFASFLSRDE 162 (442)
Q Consensus 103 s~~--~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~~~~F~sF~~rd~ 162 (442)
..+ .|++|..--....+-.|++.++..+.+... -++.+.|.|.+..|+|..= +.++
T Consensus 34 ~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~~~---~~~~F~i~~~~r~~~l~a~-s~~e 91 (119)
T 2dhk_A 34 DERKCQLYYSRTAQDANPLDSIDLSSAVFDCKADA---EEGIFEIKTPSRVITLKAA-TKQA 91 (119)
T ss_dssp ETTTTEEEEESSTTCCSCSEEEEGGGCEEEECTTG---GGCEEEEECSSCCEEEECS-SHHH
T ss_pred ECCccEEEEECCCCCcccccEEECCCCEEEecCCC---CCCEEEEEeCCcEEEEECC-CHHH
Confidence 445 677776543334567899999888765322 3568999998888887643 3443
No 47
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=27.68 E-value=1.2e+02 Score=28.06 Aligned_cols=74 Identities=18% Similarity=0.362 Sum_probs=50.3
Q ss_pred EEEEEEeecceeeeEEEEecceEEEEeccCC-ceeEEEEecccccccccccc-ccccCcEEEEEeC-CeEEEEeecCCHH
Q 013482 85 DFNCAFQESILLQGHMYLFVHFICFYSNIFG-FETKKIIPFYEVTAVRRAKT-AGIFPNAIEIFAA-GKKYFFASFLSRD 161 (442)
Q Consensus 85 ~f~Cal~~~i~~~GrlYis~~~icF~S~~~g-~~~k~~I~~~dI~~I~k~~~-~~~~pnaI~I~t~-~~~~~F~sF~~rd 161 (442)
...|.+.. ..|-||.-+++|-| | .+-.+.|+++||.+|.=... .+-| .+.|.++ +.+|.|++.-..+
T Consensus 157 ~Vkc~~kA---keG~LyfL~~~ilF-----gf~KP~l~i~~~dI~svs~Srv~~RTF--dl~v~~k~g~e~eFsmIDq~E 226 (237)
T 3fss_A 157 HLQCHRGT---KEGTLYFLPDHIIF-----GFKKPILLLDASDIESITYSSITRLTF--NASLVTKDGEKYEFSMIDQTE 226 (237)
T ss_dssp EEEEESSS---SEEEEEECSSEEEE-----ESSSSCEEEEGGGEEEEEEESCCSSEE--EEEEEETTSCEEEEEEEEGGG
T ss_pred EEEEEcCC---CCeEEEEecCceEE-----ecCCCeEEEEehhEEEEEEEeccCcEE--EEEEEECCCCeEEEeecCHHH
Confidence 35566543 47999999999876 4 34458899999999887653 2334 5667665 5789997765444
Q ss_pred HHHHHHHHH
Q 013482 162 EAFKLITDG 170 (442)
Q Consensus 162 ~~~~li~~~ 170 (442)
|..|.+.
T Consensus 227 --~~~Id~f 233 (237)
T 3fss_A 227 --YAKIDDY 233 (237)
T ss_dssp --HHHHHHH
T ss_pred --HHHHHHH
Confidence 4555543
No 48
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=26.76 E-value=1.4e+02 Score=26.91 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=42.8
Q ss_pred EEecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCCeEEEEeecCCHHHHHHHH
Q 013482 101 YLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFASFLSRDEAFKLI 167 (442)
Q Consensus 101 Yis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~~~~F~sF~~rd~~~~li 167 (442)
-+..+.|++|.+--....+-.|++.++..+..... -+++++|.|.+..|+|..= +.+++-.=|
T Consensus 85 vL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~~---k~~~F~I~t~~r~~~l~A~-s~~e~~~Wv 147 (228)
T 3tfm_A 85 VLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNTN---KENGIDIIMADRTFHLIAE-SPEDASQWF 147 (228)
T ss_dssp EECSSEEEEESSTTCCSEEEEEEGGGCSEEEEETT---TTSEEEEECSSCEEEEECS-SHHHHHHHH
T ss_pred EEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCCC---CCcEEEEEcCCcEEEEEcC-CHHHHHHHH
Confidence 45677788887654445677899999988765432 3679999998888888543 444443333
No 49
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=26.21 E-value=2.6e+02 Score=22.54 Aligned_cols=111 Identities=14% Similarity=0.178 Sum_probs=58.8
Q ss_pred eeeeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEE
Q 013482 282 TKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKF 361 (442)
Q Consensus 282 ~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i 361 (442)
+.-.+.+++.|++++|. +++|- ..+..++- +.. .|. ..+ +. +.+ .+...+|+-.......-++
T Consensus 14 ~i~~~~~i~ap~e~Vw~-~l~D~--~~~~~w~p--~~~-----~~~-~~~-~~---~~~--~~~~~~g~~~~~~~~~~~~ 76 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFE-FLTDP--KRFSRAFP--GFK-----SVE-VED-GS---FTI--ELRLSLGPLRGDARVRASF 76 (157)
T ss_dssp EEEEEEEESSCHHHHHH-HHTCH--HHHGGGST--TEE-----EEE-EET-TE---EEE--EEEEESSSSEEEEEEEEEE
T ss_pred EEeeEEEEcCCHHHHHH-HHcCH--HHHHhhCC--Cce-----EEE-ECC-CE---EEE--EEEEEEcceeEEEEEEEEE
Confidence 34456799999999999 55553 22333321 111 122 111 21 222 2333355533222323333
Q ss_pred E-EecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 362 R-VYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 362 ~-~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
. ...+..+++..... + .+.-|.....|.++..+ ++|+|.....+.+..
T Consensus 77 ~~~~~~~~i~~~~~~~--~--~~~~~~~~~~~~l~~~~----~gT~v~~~~~~~~~g 125 (157)
T 2ns9_A 77 EDLEKPSKATVKGSGR--G--AGSTLDFTLRFAVEPSG----GGSRVSWVFEGNVGG 125 (157)
T ss_dssp EEEETTTEEEEEEEEE--C--SSEEEEEEEEEEEEEET----TEEEEEEEEEEEEEE
T ss_pred EecCCCcEEEEEEEec--C--CCccEEEEEEEEEEeCC----CcEEEEEEEEEEECc
Confidence 2 23455565543322 2 12346778899998874 479999998888753
No 50
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=25.97 E-value=3.1e+02 Score=23.35 Aligned_cols=70 Identities=19% Similarity=0.167 Sum_probs=44.0
Q ss_pred EEecceEEEEec----cCCceeEEEEecccccccccc---cccc----------------------ccCcEEEEEeCCeE
Q 013482 101 YLFVHFICFYSN----IFGFETKKIIPFYEVTAVRRA---KTAG----------------------IFPNAIEIFAAGKK 151 (442)
Q Consensus 101 Yis~~~icF~S~----~~g~~~k~~I~~~dI~~I~k~---~~~~----------------------~~pnaI~I~t~~~~ 151 (442)
.|+.+.|.+|-. --+.+.+=.|++.++..|+.. .... -+|++++|.|.+..
T Consensus 30 VL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt 109 (169)
T 1btk_A 30 LLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGP 109 (169)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCC
T ss_pred EEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCce
Confidence 356778888875 334566778999998877655 2110 12378999998777
Q ss_pred EEEeecCCHHHHHHHHHHHH
Q 013482 152 YFFASFLSRDEAFKLITDGW 171 (442)
Q Consensus 152 ~~F~sF~~rd~~~~li~~~w 171 (442)
|+|.. -+.++.-+=|..|-
T Consensus 110 ~yl~A-~s~~E~~eWi~aI~ 128 (169)
T 1btk_A 110 LYVFS-PTEELRKRWIHQLK 128 (169)
T ss_dssp EEEEE-SCHHHHHHHHHHHH
T ss_pred EEEEc-CCHHHHHHHHHHHH
Confidence 77654 45555444444443
No 51
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=24.32 E-value=2.1e+02 Score=26.56 Aligned_cols=46 Identities=11% Similarity=0.002 Sum_probs=31.1
Q ss_pred CCeEEEE-EEEEeCCCCCCCc----eEEEEEEEEEecCCCCCCceEEEEEEEEE
Q 013482 366 NSHLVIE-TSQEVHDVPYGDY----FRVEGLWDVMRDDGGSKEGCILRVYVNVA 414 (442)
Q Consensus 366 ~~~~vVe-~~~~~~dVPygD~----F~ve~r~~i~~~~~~~~~~c~l~V~~~V~ 414 (442)
++.|+|. .+...+.+|=..- ....+.|.|.+.++ +.|+|.....+.
T Consensus 165 G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~---~~t~VtY~~q~d 215 (258)
T 3fo5_A 165 GDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGD---QLTKVSYYNQAT 215 (258)
T ss_dssp TCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEET---TEEEEEEEESCC
T ss_pred CCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCC---CCEEEEEEEeeC
Confidence 3346554 4566678886554 34558899999875 588888776654
No 52
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=23.68 E-value=1.8e+02 Score=22.28 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=37.0
Q ss_pred EEecceEEEEeccCCceeEEEEecccccccccccc-ccccCcEEEEEe--------CCeEEEEeecCCHHHHHH
Q 013482 101 YLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKT-AGIFPNAIEIFA--------AGKKYFFASFLSRDEAFK 165 (442)
Q Consensus 101 Yis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~-~~~~pnaI~I~t--------~~~~~~F~sF~~rd~~~~ 165 (442)
.|..+.|++|..--....+-.|++.++..+..... ..--+++++|.+ .+..|+|.. .+.+++-.
T Consensus 30 vL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a-~s~~e~~~ 102 (118)
T 1v89_A 30 VLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMA-SSQAEMEE 102 (118)
T ss_dssp EEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEEC-SSHHHHHH
T ss_pred EEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEEC-CCHHHHHH
Confidence 35667788885543334566788887665432211 112357899988 556777754 44444333
No 53
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=22.61 E-value=94 Score=25.39 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=33.4
Q ss_pred eeEEEEecceEEEEeccCCceeEEEEeccccccccccc
Q 013482 97 QGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAK 134 (442)
Q Consensus 97 ~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~ 134 (442)
-+.|.+.+.+|.|....=|....+.||+..|..|-...
T Consensus 59 v~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyArE 96 (111)
T 1ou8_A 59 TGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARE 96 (111)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeec
Confidence 48899999999999987788889999999999987554
No 54
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=22.00 E-value=97 Score=25.59 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=33.3
Q ss_pred eeEEEEecceEEEEeccCCceeEEEEeccccccccccc
Q 013482 97 QGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAK 134 (442)
Q Consensus 97 ~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~ 134 (442)
-+.|.+.+.+|.|....=|....+.||+..|..|-...
T Consensus 60 v~~L~i~nd~IsF~ARFgGv~~~i~VP~~AV~aIyArE 97 (118)
T 1yfn_A 60 VGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARE 97 (118)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeeee
Confidence 48899999999999987788889999999999986544
No 55
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=21.89 E-value=1.2e+02 Score=25.65 Aligned_cols=55 Identities=7% Similarity=0.073 Sum_probs=34.8
Q ss_pred EecceEEEEeccCCceeEEEEeccccccccccccccccCcEEEEEeCCeEEEEee
Q 013482 102 LFVHFICFYSNIFGFETKKIIPFYEVTAVRRAKTAGIFPNAIEIFAAGKKYFFAS 156 (442)
Q Consensus 102 is~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~~~~~~pnaI~I~t~~~~~~F~s 156 (442)
+..+.|++|-.--.....-.|++.+.+.+.-.....-.++++.|.|.+..|+|..
T Consensus 41 Lk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A 95 (149)
T 1x1f_A 41 LRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKT 95 (149)
T ss_dssp EETTEEEEESCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEEC
T ss_pred EcCCEEEEEeCCCccccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEc
Confidence 4567788876544334445788888876622111111356899999988898864
No 56
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=21.03 E-value=7.6 Score=35.97 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=54.6
Q ss_pred CccceeeeeeEEecCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeE
Q 013482 278 PECYTKVAETNFQMKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKE 357 (442)
Q Consensus 278 ~~~~~~v~e~~f~isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e 357 (442)
|..+...+..+++++++++|.+ ++|-. . +..+.......++.-+.|. .-|..|.++|.- |.+...+.
T Consensus 75 ~~~~~~~v~~~I~ApadkVW~l-v~Df~-~-pk~w~p~I~s~el~eGdg~---gvGSVR~lt~~~------G~p~~~vk- 141 (223)
T 3qrz_A 75 PDQCCSSVVQMIHAPPESVWAL-VRRFD-N-PKVYKNFIRQCRIVQGDGL---HVGDLREVMVVS------GLPAVSST- 141 (223)
T ss_dssp TTCEEECCCCCCSSCHHHHHHH-HHCCS-S-GGGTCSSCCCCCCCC---C---CSSCCCCCCC---------CCCCCCC-
T ss_pred CCeEEEEEEEEEcCCHHHHHHH-HhCCC-C-hhHcchhcCEEEEEcCCCC---CCCeEEEEEecC------CCccceEE-
Confidence 3445556677899999999996 45532 1 2222222223333333331 236789888751 22222333
Q ss_pred EEEEEEecCCeEEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCCceEEEEEEEE
Q 013482 358 TQKFRVYRNSHLVIETSQEVHDVPYGDYFRVEGLWDVMRDDGGSKEGCILRVYVNV 413 (442)
Q Consensus 358 ~Q~i~~~~~~~~vVe~~~~~~dVPygD~F~ve~r~~i~~~~~~~~~~c~l~V~~~V 413 (442)
+++..+++....+.-+..-.++|+.+|=.+ +.+...+. ++|.+.-.+.+
T Consensus 142 -ErLe~iDde~~~~sYsIieG~~p~~~Y~st---ikV~p~~d---GGT~V~Ws~~f 190 (223)
T 3qrz_A 142 -ERLEILDEERHVISFSVVGGDHRLKNYRSV---TTLHASDD---EGTVVVESYIV 190 (223)
T ss_dssp -CCCSEEETTTTEEECCCTTCSSSCCCCCCE---EEC-----------CCEEEEEE
T ss_pred -EEEEEEeccCCEEEEEEEeCCCccccEEEE---EEEEEcCC---CCEEEEEEEEE
Confidence 455445444333333333356788776655 44555432 46776666544
No 57
>1ou9_A Stringent starvation protein B homolog; SSRA peptide-binding protein, homodimer, transport protein; 1.80A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1oul_A 1zsz_C
Probab=20.91 E-value=1e+02 Score=25.79 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=33.4
Q ss_pred eeEEEEecceEEEEeccCCceeEEEEeccccccccccc
Q 013482 97 QGHMYLFVHFICFYSNIFGFETKKIIPFYEVTAVRRAK 134 (442)
Q Consensus 97 ~GrlYis~~~icF~S~~~g~~~k~~I~~~dI~~I~k~~ 134 (442)
-+.|.+.+.+|.|....=|....+.||+..|..|-...
T Consensus 59 v~~L~i~nd~IsF~ARFgGv~~~I~VP~~AV~aIyArE 96 (129)
T 1ou9_A 59 TGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYARE 96 (129)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEETT
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHheeEeeecc
Confidence 48899999999999987788889999999999987654
No 58
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=20.57 E-value=4.1e+02 Score=22.87 Aligned_cols=118 Identities=5% Similarity=0.006 Sum_probs=61.8
Q ss_pred eeeeEEe-cCHHHHHhhhccCCchhHHHHHHHHcCCceeEeccceecCCCceeeEEEEEeeeeecCCCceeeeeEEEEEE
Q 013482 284 VAETNFQ-MKVEDFYSLFFSDDTVNFIESFHRKCGDKEFKCTSWHRHYEFGYSRDLSFQHPIKVYFGAKFGSCKETQKFR 362 (442)
Q Consensus 284 v~e~~f~-isv~~lF~llFsd~s~~f~~~~~~~~g~~di~~tpW~~~~~~~~~R~vsY~~pl~~~iGpk~t~~~e~Q~i~ 362 (442)
-.+.+++ ++++++|+++... ....++.......++. .. + + ...+.+......|+.+..- |. .....
T Consensus 55 k~~~~i~~~~~~~v~~~l~d~---~~r~~Wd~~~~~~~vl----e~--~-~-~~i~~~~~~~p~p~~~RD~-v~-~~~~~ 121 (214)
T 1ln1_A 55 KVFGVLEDCSPTLLADIYMDS---DYRKQWDQYVKELYEQ----EC--N-G-ETVVYWEVKYPFPMSNRDY-VY-LRQRR 121 (214)
T ss_dssp EEEEEETTSCHHHHHHHHHCH---HHHHHHCTTEEEEEEE----EE--T-T-EEEEEEEECCCTTSCCEEE-EE-EEEEE
T ss_pred EEEEEECCCCHHHHHHHHcCH---HHHHHHHHHHhhEEEe----cc--C-C-CEEEEEEEEcCCCCCCceE-EE-EEEEE
Confidence 3567895 9999999987642 2333333322222221 11 2 2 2233333322223333211 22 12222
Q ss_pred Eec-C-C-eE-EEEEEEEeCCCCCCCce----EEEEEEEEEecCCCCCCceEEEEEEEEEEee
Q 013482 363 VYR-N-S-HL-VIETSQEVHDVPYGDYF----RVEGLWDVMRDDGGSKEGCILRVYVNVAFSK 417 (442)
Q Consensus 363 ~~~-~-~-~~-vVe~~~~~~dVPygD~F----~ve~r~~i~~~~~~~~~~c~l~V~~~V~F~K 417 (442)
..+ + . .| ++..+...+++|-..-| .....|+|++.++ ++|+|.....+....
T Consensus 122 ~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~---~~t~v~~~~~~Dp~G 181 (214)
T 1ln1_A 122 DLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK---KGSKVFMYYFDNPGG 181 (214)
T ss_dssp EECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS---SSEEEEEEEEECCSS
T ss_pred ecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCC---CceEEEEEEEECCCC
Confidence 222 3 2 34 44556666778864433 2457799998754 589999999988763
Done!